# pathwayInfo

id: PF10633
description: NPCBM-associated, NEW3 domain of alpha-galactosidase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10633
name:
  Protein Domains (Pfam).STRING_v12.0_1090322_STRINGid_PF10633_NPCBM-associated,_NEW3_domain_of_alpha-galactosidase


id: PF10771
description: Winged helix-turn-helix domain (DUF2582)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10771
name:
  Protein Domains (Pfam).STRING_v12.0_1090322_STRINGid_PF10771_Winged_helix-turn-helix_domain_(DUF2582)


id: PF11799
description: impB/mucB/samB family C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF11799
name:
  Protein Domains (Pfam).STRING_v12.0_1090322_STRINGid_PF11799_impB/mucB/samB_family_C-terminal_domain


id: PF11940
description: Domain of unknown function (DUF3458) Ig-like fold
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF11940
name:
  Protein Domains (Pfam).STRING_v12.0_1090322_STRINGid_PF11940_Domain_of_unknown_function_(DUF3458)_Ig-like_fold


id: PF12172
description: Rubredoxin-like zinc ribbon domain (DUF35_N)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12172
name:
  Protein Domains (Pfam).STRING_v12.0_1090322_STRINGid_PF12172_Rubredoxin-like_zinc_ribbon_domain_(DUF35_N)


id: PF12176
description: Methanol-cobalamin methyltransferase B subunit
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12176
name:
  Protein Domains (Pfam).STRING_v12.0_1090322_STRINGid_PF12176_Methanol-cobalamin_methyltransferase_B_subunit


id: PF12256
description: Insecticide toxin TcdB middle/N-terminal region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12256
name:
  Protein Domains (Pfam).STRING_v12.0_1090322_STRINGid_PF12256_Insecticide_toxin_TcdB_middle/N-terminal_region


id: PF12367
description: Pyruvate ferredoxin oxidoreductase beta subunit C terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12367
name:
  Protein Domains (Pfam).STRING_v12.0_1090322_STRINGid_PF12367_Pyruvate_ferredoxin_oxidoreductase_beta_subunit_C_terminal


id: PF12850
description: Calcineurin-like phosphoesterase superfamily domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12850
name:
  Protein Domains (Pfam).STRING_v12.0_1090322_STRINGid_PF12850_Calcineurin-like_phosphoesterase_superfamily_domain


id: PF12895
description: Anaphase-promoting complex, cyclosome, subunit 3
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12895
name:
  Protein Domains (Pfam).STRING_v12.0_1090322_STRINGid_PF12895_Anaphase-promoting_complex,_cyclosome,_subunit_3


id: PF12911
description: N-terminal TM domain of oligopeptide transport permease C
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12911
name:
  Protein Domains (Pfam).STRING_v12.0_1090322_STRINGid_PF12911_N-terminal_TM_domain_of_oligopeptide_transport_permease_C


id: PF12974
description: ABC transporter, phosphonate, periplasmic substrate-binding protein
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12974
name:
  Protein Domains (Pfam).STRING_v12.0_1090322_STRINGid_PF12974_ABC_transporter,_phosphonate,_periplasmic_substrate-binding_protein_


id: PF13231
description: Dolichyl-phosphate-mannose-protein mannosyltransferase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13231
name:
  Protein Domains (Pfam).STRING_v12.0_1090322_STRINGid_PF13231_Dolichyl-phosphate-mannose-protein_mannosyltransferase


id: PF13304
description: AAA domain, putative AbiEii toxin, Type IV TA system
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13304
name:
  Protein Domains (Pfam).STRING_v12.0_1090322_STRINGid_PF13304_AAA_domain,_putative_AbiEii_toxin,_Type_IV_TA_system


id: PF13343
description: Bacterial extracellular solute-binding protein
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13343
name:
  Protein Domains (Pfam).STRING_v12.0_1090322_STRINGid_PF13343_Bacterial_extracellular_solute-binding_protein


id: PF13367
description: PrsW family intramembrane metalloprotease
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13367
name:
  Protein Domains (Pfam).STRING_v12.0_1090322_STRINGid_PF13367_PrsW_family_intramembrane_metalloprotease


id: PF13370
description: 4Fe-4S single cluster domain of Ferredoxin I
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13370
name:
  Protein Domains (Pfam).STRING_v12.0_1090322_STRINGid_PF13370_4Fe-4S_single_cluster_domain_of_Ferredoxin_I


id: PF13385
description: Concanavalin A-like lectin/glucanases superfamily
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13385
name:
  Protein Domains (Pfam).STRING_v12.0_1090322_STRINGid_PF13385_Concanavalin_A-like_lectin/glucanases_superfamily


id: PF13386
description: Cytochrome C biogenesis protein transmembrane region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13386
name:
  Protein Domains (Pfam).STRING_v12.0_1090322_STRINGid_PF13386_Cytochrome_C_biogenesis_protein_transmembrane_region_


id: PF13442
description: Cytochrome C oxidase, cbb3-type, subunit III
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13442
name:
  Protein Domains (Pfam).STRING_v12.0_1090322_STRINGid_PF13442_Cytochrome_C_oxidase,_cbb3-type,_subunit_III_


id: PF13495
description: Phage integrase, N-terminal SAM-like domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13495
name:
  Protein Domains (Pfam).STRING_v12.0_1090322_STRINGid_PF13495_Phage_integrase,_N-terminal_SAM-like_domain


id: PF13531
description: Bacterial extracellular solute-binding protein
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13531
name:
  Protein Domains (Pfam).STRING_v12.0_1090322_STRINGid_PF13531_Bacterial_extracellular_solute-binding_protein


id: PF13542
description: Helix-turn-helix domain of transposase family ISL3
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13542
name:
  Protein Domains (Pfam).STRING_v12.0_1090322_STRINGid_PF13542_Helix-turn-helix_domain_of_transposase_family_ISL3


id: PF13597
description: Anaerobic ribonucleoside-triphosphate reductase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13597
name:
  Protein Domains (Pfam).STRING_v12.0_1090322_STRINGid_PF13597_Anaerobic_ribonucleoside-triphosphate_reductase


id: PF13607
description: Succinyl-CoA ligase like flavodoxin domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13607
name:
  Protein Domains (Pfam).STRING_v12.0_1090322_STRINGid_PF13607_Succinyl-CoA_ligase_like_flavodoxin_domain


id: PF13620
description: Carboxypeptidase regulatory-like domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13620
name:
  Protein Domains (Pfam).STRING_v12.0_1090322_STRINGid_PF13620_Carboxypeptidase_regulatory-like_domain


id: PF13738
description: Pyridine nucleotide-disulphide oxidoreductase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13738
name:
  Protein Domains (Pfam).STRING_v12.0_1090322_STRINGid_PF13738_Pyridine_nucleotide-disulphide_oxidoreductase


id: PF13749
description: Putative ATP-dependent DNA helicase recG C-terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13749
name:
  Protein Domains (Pfam).STRING_v12.0_1090322_STRINGid_PF13749_Putative_ATP-dependent_DNA_helicase_recG_C-terminal


id: PF14262
description: Carbohydrate-binding domain-containing protein Cthe_2159
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14262
name:
  Protein Domains (Pfam).STRING_v12.0_1090322_STRINGid_PF14262_Carbohydrate-binding_domain-containing_protein_Cthe_2159


id: PF14382
description: Exosome complex exonuclease RRP4 N-terminal region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14382
name:
  Protein Domains (Pfam).STRING_v12.0_1090322_STRINGid_PF14382_Exosome_complex_exonuclease_RRP4_N-terminal_region


id: PF14417
description: MEDS: MEthanogen/methylotroph, DcmR Sensory domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14417
name:
  Protein Domains (Pfam).STRING_v12.0_1090322_STRINGid_PF14417_MEDS:_MEthanogen/methylotroph,_DcmR_Sensory_domain


id: PF14572
description: Phosphoribosyl synthetase-associated domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14572
name:
  Protein Domains (Pfam).STRING_v12.0_1090322_STRINGid_PF14572_Phosphoribosyl_synthetase-associated_domain


id: PF14602
description: Hexapeptide repeat of succinyl-transferase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14602
name:
  Protein Domains (Pfam).STRING_v12.0_1090322_STRINGid_PF14602_Hexapeptide_repeat_of_succinyl-transferase


id: PF14667
description: Polysaccharide biosynthesis C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14667
name:
  Protein Domains (Pfam).STRING_v12.0_1090322_STRINGid_PF14667_Polysaccharide_biosynthesis_C-terminal_domain


id: PF14690
description: Zinc-finger of transposase IS204/IS1001/IS1096/IS1165
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14690
name:
  Protein Domains (Pfam).STRING_v12.0_1090322_STRINGid_PF14690_Zinc-finger_of_transposase_IS204/IS1001/IS1096/IS1165


id: PF14691
description: Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14691
name:
  Protein Domains (Pfam).STRING_v12.0_1090322_STRINGid_PF14691_Dihydroprymidine_dehydrogenase_domain_II,_4Fe-4S_cluster


id: PF14720
description: NiFe/NiFeSe hydrogenase small subunit C-terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14720
name:
  Protein Domains (Pfam).STRING_v12.0_1090322_STRINGid_PF14720_NiFe/NiFeSe_hydrogenase_small_subunit_C-terminal


id: PF14748
description: Pyrroline-5-carboxylate reductase dimerisation
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14748
name:
  Protein Domains (Pfam).STRING_v12.0_1090322_STRINGid_PF14748_Pyrroline-5-carboxylate_reductase_dimerisation


id: PF14810
description: Patch-forming domain C2 of tRNA-guanine transglycosylase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14810
name:
  Protein Domains (Pfam).STRING_v12.0_1090322_STRINGid_PF14810_Patch-forming_domain_C2_of_tRNA-guanine_transglycosylase


id: PF14811
description: Protein of unknown function TPD sequence-motif
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14811
name:
  Protein Domains (Pfam).STRING_v12.0_1090322_STRINGid_PF14811_Protein_of_unknown_function_TPD_sequence-motif


id: PF15919
description: HicB_like antitoxin of bacterial toxin-antitoxin system
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF15919
name:
  Protein Domains (Pfam).STRING_v12.0_1090322_STRINGid_PF15919_HicB_like_antitoxin_of_bacterial_toxin-antitoxin_system


id: PF16177
description: Acetyl-coenzyme A synthetase N-terminus
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16177
name:
  Protein Domains (Pfam).STRING_v12.0_1090322_STRINGid_PF16177_Acetyl-coenzyme_A_synthetase_N-terminus


id: PF16198
description: tRNA pseudouridylate synthase B C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16198
name:
  Protein Domains (Pfam).STRING_v12.0_1090322_STRINGid_PF16198_tRNA_pseudouridylate_synthase_B_C-terminal_domain


id: PF16295
description: Tetracyclin repressor-like, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16295
name:
  Protein Domains (Pfam).STRING_v12.0_1090322_STRINGid_PF16295_Tetracyclin_repressor-like,_C-terminal_domain


id: PF16653
description: Saccharopine dehydrogenase C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16653
name:
  Protein Domains (Pfam).STRING_v12.0_1090322_STRINGid_PF16653_Saccharopine_dehydrogenase_C-terminal_domain


id: PF16886
description: ATPsynthase alpha/beta subunit N-term extension
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16886
name:
  Protein Domains (Pfam).STRING_v12.0_1090322_STRINGid_PF16886_ATPsynthase_alpha/beta_subunit_N-term_extension


id: PF16916
description: Dimerisation domain of Zinc Transporter
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16916
name:
  Protein Domains (Pfam).STRING_v12.0_1090322_STRINGid_PF16916_Dimerisation_domain_of_Zinc_Transporter


id: PF16917
description: Biotin/lipoate A/B protein ligase family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16917
name:
  Protein Domains (Pfam).STRING_v12.0_1090322_STRINGid_PF16917_Biotin/lipoate_A/B_protein_ligase_family


id: PF16927
description: N-terminal 7TM region of histidine kinase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16927
name:
  Protein Domains (Pfam).STRING_v12.0_1090322_STRINGid_PF16927_N-terminal_7TM_region_of_histidine_kinase


id: PF17131
description: Outer membrane lipoprotein-sorting protein
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF17131
name:
  Protein Domains (Pfam).STRING_v12.0_1090322_STRINGid_PF17131_Outer_membrane_lipoprotein-sorting_protein


id: PF17144
description: Ribosomal large subunit proteins 60S L5, and 50S L18
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF17144
name:
  Protein Domains (Pfam).STRING_v12.0_1090322_STRINGid_PF17144_Ribosomal_large_subunit_proteins_60S_L5,_and_50S_L18


id: PF17147
description: Pyruvate:ferredoxin oxidoreductase core domain II
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF17147
name:
  Protein Domains (Pfam).STRING_v12.0_1090322_STRINGid_PF17147_Pyruvate:ferredoxin_oxidoreductase_core_domain_II


id: PF17432
description: Domain of unknown function (DUF3458_C) ARM repeats
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF17432
name:
  Protein Domains (Pfam).STRING_v12.0_1090322_STRINGid_PF17432_Domain_of_unknown_function_(DUF3458_C)_ARM_repeats


id: SM00034
description: C-type lectin (CTL) or carbohydrate-recognition domain (CRD)
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00034
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM00034_C-type_lectin_(CTL)_or_carbohydrate-recognition_domain_(CRD)


id: SM00062
description: Bacterial periplasmic substrate-binding proteins
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00062
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM00062_Bacterial_periplasmic_substrate-binding_proteins


id: SM00065
description: Domain present in phytochromes and cGMP-specific phosphodiesterases.
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00065
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM00065_Domain_present_in_phytochromes_and_cGMP-specific_phosphodiesterases.


id: SM00086
description: Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00086
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM00086_Motif_C-terminal_to_PAS_motifs_(likely_to_contribute_to_PAS_structural_domain)


id: SM00089
description: Repeats in polycystic kidney disease 1 (PKD1) and other proteins
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00089
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM00089_Repeats_in_polycystic_kidney_disease_1_(PKD1)_and_other_proteins


id: SM00116
description: Domain in cystathionine beta-synthase and other proteins.
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00116
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM00116_Domain_in_cystathionine_beta-synthase_and_other_proteins.


id: SM00138
description: Methyltransferase, chemotaxis proteins
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00138
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM00138_Methyltransferase,_chemotaxis_proteins


id: SM00156
description: Protein phosphatase 2A homologues, catalytic domain.
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00156
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM00156_Protein_phosphatase_2A_homologues,_catalytic_domain.


id: SM00226
description: Low molecular weight phosphatase family
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00226
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM00226_Low_molecular_weight_phosphatase_family


id: SM00228
description: Domain present in PSD-95, Dlg, and ZO-1/2.
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00228
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM00228_Domain_present_in_PSD-95,_Dlg,_and_ZO-1/2.


id: SM00260
description: Two component signalling adaptor domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00260
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM00260_Two_component_signalling_adaptor_domain


id: SM00271
description: DnaJ molecular chaperone homology domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00271
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM00271_DnaJ_molecular_chaperone_homology_domain


id: SM00278
description: Helix-hairpin-helix DNA-binding motif class 1
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00278
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM00278_Helix-hairpin-helix_DNA-binding_motif_class_1


id: SM00279
description: Helix-hairpin-helix class 2 (Pol1 family) motifs
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00279
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM00279_Helix-hairpin-helix_class_2_(Pol1_family)_motifs


id: SM00283
description: Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00283
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM00283_Methyl-accepting_chemotaxis-like_domains_(chemotaxis_sensory_transducer).


id: SM00304
description: HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00304
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM00304_HAMP_(Histidine_kinases,_Adenylyl_cyclases,_Methyl_binding_proteins,_Phosphatases)_domain


id: SM00316
description: Ribosomal protein S1-like RNA-binding domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00316
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM00316_Ribosomal_protein_S1-like_RNA-binding_domain


id: SM00327
description: Von Willebrand factor (vWF) type A domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00327
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM00327_Von_Willebrand_factor_(vWF)_type_A_domain


id: SM00347
description: Helix_turn_helix multiple antibiotic resistance protein
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00347
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM00347_Helix_turn_helix_multiple_antibiotic_resistance_protein


id: SM00359
description: Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00359
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM00359_Putative_RNA-binding_Domain_in_PseudoUridine_synthase_and_Archaeosine_transglycosylase


id: SM00382
description: ATPases associated with a variety of cellular activities
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00382
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM00382_ATPases_associated_with_a_variety_of_cellular_activities


id: SM00385
description: Domain present in cyclins, TFIIB and Retinoblastoma
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00385
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM00385_Domain_present_in_cyclins,_TFIIB_and_Retinoblastoma


id: SM00418
description: Helix_turn_helix, Arsenical Resistance Operon Repressor
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00418
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM00418_Helix_turn_helix,_Arsenical_Resistance_Operon_Repressor


id: SM00420
description: Helix_turn_helix, Deoxyribose operon repressor
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00420
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM00420_Helix_turn_helix,_Deoxyribose_operon_repressor


id: SM00436
description: Bacterial DNA topoisomeraes I ATP-binding domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00436
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM00436_Bacterial_DNA_topoisomeraes_I_ATP-binding_domain


id: SM00437
description: Bacterial DNA topoisomerase I DNA-binding domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00437
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM00437_Bacterial_DNA_topoisomerase_I_DNA-binding_domain


id: SM00471
description: Metal dependent phosphohydrolases with conserved HD motif.
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00471
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM00471_Metal_dependent_phosphohydrolases_with_conserved_HD_motif.


id: SM00481
description: DNA polymerase alpha chain like domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00481
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM00481_DNA_polymerase_alpha_chain_like_domain


id: SM00490
description: Helicase superfamily c-terminal domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00490
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM00490_Helicase_superfamily_c-terminal_domain


id: SM00493
description: Topoisomerases, DnaG-type primases, OLD family nucleases and RecR proteins
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00493
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM00493_Topoisomerases,_DnaG-type_primases,_OLD_family_nucleases_and_RecR_proteins


id: SM00525
description: Iron-sulpphur binding domain in DNA-(apurinic or apyrimidinic site) lyase (subfamily of ENDO3)
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00525
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM00525_Iron-sulpphur_binding_domain_in_DNA-(apurinic_or_apyrimidinic_site)_lyase_(subfamily_of_ENDO3)


id: SM00529
description: Helix-turn-helix diphteria tox regulatory element
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00529
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM00529_Helix-turn-helix_diphteria_tox_regulatory_element


id: SM00530
description: Helix-turn-helix XRE-family like proteins
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00530
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM00530_Helix-turn-helix_XRE-family_like_proteins


id: SM00533
description: DNA-binding domain of DNA mismatch repair MUTS family
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00533
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM00533_DNA-binding_domain_of_DNA_mismatch_repair_MUTS_family


id: SM00534
description: ATPase domain of DNA mismatch repair MUTS family
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00534
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM00534_ATPase_domain_of_DNA_mismatch_repair_MUTS_family


id: SM00554
description: Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00554
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM00554_Four_repeated_domains_in_the_Fasciclin_I_family_of_proteins,_present_in_many_other_contexts.


id: SM00562
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00562
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM00562_These_are_enzymes_that_catalyze_nonsubstrate_specific_conversions_of_nucleoside_diphosphates_to_nucleoside_triphosphates._These_enzymes_play_important_roles_in_bacterial_growth,_signal_transduction_and_pathogenicity.

description:
  These are enzymes that catalyze nonsubstrate specific conversions of nucleoside diphosphates to nucleoside triphosphates. These enzymes play important roles in bacterial growth, signal transduction and pathogenicity.


id: SM00652
description: Eukaryotic translation initiation factor 1A
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00652
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM00652_Eukaryotic_translation_initiation_factor_1A


id: SM00653
description: Domain present in translation initiation factor eIF2B and eIF5
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00653
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM00653_Domain_present_in_translation_initiation_factor_eIF2B_and_eIF5


id: SM00670
description: Large family of predicted nucleotide-binding domains
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00670
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM00670_Large_family_of_predicted_nucleotide-binding_domains


id: SM00704
description: CDGSH-type zinc finger. Function unknown.
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00704
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM00704_CDGSH-type_zinc_finger._Function_unknown.


id: SM00722
description: Domain present in carbohydrate binding proteins and sugar hydrolses
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00722
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM00722_Domain_present_in_carbohydrate_binding_proteins_and_sugar_hydrolses


id: SM00729
description: Elongator protein 3, MiaB family, Radical SAM
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00729
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM00729_Elongator_protein_3,_MiaB_family,_Radical_SAM


id: SM00730
description: Presenilin, signal peptide peptidase, family
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00730
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM00730_Presenilin,_signal_peptide_peptidase,_family


id: SM00736
description: Dystroglycan-type cadherin-like domains.
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00736
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM00736_Dystroglycan-type_cadherin-like_domains.


id: SM00738
description: In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00738
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM00738_In_Spt5p,_this_domain_may_confer_affinity_for_Spt4p._It_possesses_a_RNP-like_fold.


id: SM00739
description: KOW (Kyprides, Ouzounis, Woese) motif.
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00739
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM00739_KOW_(Kyprides,_Ouzounis,_Woese)_motif.


id: SM00790
description: Aldehyde ferredoxin oxidoreductase, N-terminal domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00790
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM00790_Aldehyde_ferredoxin_oxidoreductase,_N-terminal_domain


id: SM00840
description: This DALR domain is found in cysteinyl-tRNA-synthetases.
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00840
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM00840_This_DALR_domain_is_found_in_cysteinyl-tRNA-synthetases.


id: SM00846
description: Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00846
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM00846_Glyceraldehyde_3-phosphate_dehydrogenase,_NAD_binding_domain


id: SM00858
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00858
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM00858_This_domain_family_includes_a_range_of_different_proteins._Such_as_antifreeze_proteins_and_flagellar_FlgA_proteins,_and_CpaB_pilus_proteins.

description:
  This domain family includes a range of different proteins. Such as antifreeze proteins and flagellar FlgA proteins, and CpaB pilus proteins.


id: SM00859
description: Semialdehyde dehydrogenase, NAD binding domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00859
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM00859_Semialdehyde_dehydrogenase,_NAD_binding_domain


id: SM00863
description: Threonyl and Alanyl tRNA synthetase second additional domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00863
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM00863_Threonyl_and_Alanyl_tRNA_synthetase_second_additional_domain


id: SM00865
description: Tubulin/FtsZ family, C-terminal domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00865
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM00865_Tubulin/FtsZ_family,_C-terminal_domain


id: SM00870
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00870
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM00870_Asparaginase,_which_is_found_in_various_plant,_animal_and_bacterial_cells,_catalyses_the_deamination_of_asparagine_to_yield_aspartic_acid_and_an_ammonium_ion,_resulting_in_a_depletion_of_free_circulatory_asparagine_in_plasma_PUBMED:3026924._The_...

description:
  Asparaginase, which is found in various plant, animal and bacterial cells, catalyses the deamination of asparagine to yield aspartic acid and an ammonium ion, resulting in a depletion of free circulatory asparagine in plasma PUBMED:3026924. The ...


id: SM00871
description: Bacterial transcription activator, effector binding domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00871
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM00871_Bacterial_transcription_activator,_effector_binding_domain


id: SM00879
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00879
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM00879_The_Brix_domain_is_found_in_a_number_of_eukaryotic_proteins_including_SSF_proteins_from_yeast_and_humans,_Arabidopsis_thaliana_Peter_Pan-like_protein_and_several_hypothetical_proteins.

description:
  The Brix domain is found in a number of eukaryotic proteins including SSF proteins from yeast and humans, Arabidopsis thaliana Peter Pan-like protein and several hypothetical proteins.


id: SM00880
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00880
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM00880_The_CHAD_domain_is_an_alpha-helical_domain_functionally_associated_with_some_members_of_the_adenylate_cyclase_family_._It_has_conserved_histidines_that_may_chelate_metals.

description:
  The CHAD domain is an alpha-helical domain functionally associated with some members of the adenylate cyclase family . It has conserved histidines that may chelate metals.


id: SM00888
description: EF-1 guanine nucleotide exchange domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00888
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM00888_EF-1_guanine_nucleotide_exchange_domain


id: SM00899
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00899
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM00899_This_entry_represents_the_core_domain_of_the_ferrous_iron_(Fe2+)_transport_protein_FeoA_found_in_bacteria._This_domain_also_occurs_at_the_C-terminus_in_related_proteins._The_transporter_Feo_is_composed_of_three_proteins:_FeoA_a_small,_soluble_...

description:
  This entry represents the core domain of the ferrous iron (Fe2+) transport protein FeoA found in bacteria. This domain also occurs at the C-terminus in related proteins. The transporter Feo is composed of three proteins: FeoA a small, soluble ...


id: SM00900
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00900
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM00900_This_conserved_region_includes_the_FMN-binding_site_of_the_NqrC_protein_as_well_as_the_NosR_and_NirI_regulatory_proteins.

description:
  This conserved region includes the FMN-binding site of the NqrC protein as well as the NosR and NirI regulatory proteins.


id: SM00926
description: Molybdopterin oxidoreductase Fe4S4 domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00926
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM00926_Molybdopterin_oxidoreductase_Fe4S4_domain


id: SM00933
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00933
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM00933_This_family_includes_NurA_a_nuclease_exhibiting_both_single-stranded_endonuclease_activity_and_5-3_exonuclease_activity_on_single-stranded_and_double-stranded_DNA_from_the_hyperthermophilic_archaeon_Sulfolobus_acidocaldarius_PUBMED:12052775.

description:
  This family includes NurA a nuclease exhibiting both single-stranded endonuclease activity and 5-3 exonuclease activity on single-stranded and double-stranded DNA from the hyperthermophilic archaeon Sulfolobus acidocaldarius PUBMED:12052775.


id: SM00934
description: Orotidine 5-phosphate decarboxylase / HUMPS family
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00934
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM00934_Orotidine_5-phosphate_decarboxylase_/_HUMPS_family


id: SM00941
description: Pyrimidine nucleoside phosphorylase C-terminal domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00941
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM00941_Pyrimidine_nucleoside_phosphorylase_C-terminal_domain


id: SM00948
description: Proteasome subunit A N-terminal signature Add an annotation
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00948
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM00948_Proteasome_subunit_A_N-terminal_signature__Add_an_annotation


id: SM00956
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00956
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM00956_This_DNA-binding_domain_is_found_in_the_RecQ_helicase_among_others_and_has_a_helix-turn-helix_structure._The_RQC_domain,_found_only_in_RecQ_family_enzymes,_is_a_high_affinity_G4_DNA_binding_domain_PUBMED:16530788.

description:
  This DNA-binding domain is found in the RecQ helicase among others and has a helix-turn-helix structure. The RQC domain, found only in RecQ family enzymes, is a high affinity G4 DNA binding domain PUBMED:16530788.


id: SM00963
description: SRP54-type protein, helical bundle domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00963
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM00963_SRP54-type_protein,_helical_bundle_domain


id: SM00981
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00981
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM00981_The_THUMP_domain_is_named_after_after_thiouridine_synthases,_methylases_and_PSUSs_PUBMED:11295541._The_THUMP_domain_consists_of_about_110_amino_acid_residues._The_structure_of_ThiI_reveals_that_the_THUMP_has_a_fold_unlike_that_of_previously_...

description:
  The THUMP domain is named after after thiouridine synthases, methylases and PSUSs PUBMED:11295541. The THUMP domain consists of about 110 amino acid residues. The structure of ThiI reveals that the THUMP has a fold unlike that of previously ...


id: SM00987
description: UreE urease accessory protein, C-terminal domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00987
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM00987_UreE_urease_accessory_protein,_C-terminal_domain


id: SM00989
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00989
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM00989_The_V4R_(vinyl_4_reductase)_domain_is_a_predicted_small_molecular_binding_domain,_that_may_bind_to_hydrocarbons.

description:
  The V4R (vinyl 4 reductase) domain is a predicted small molecular binding domain, that may bind to hydrocarbons.


id: SM00997
description: S-adenosyl-L-homocysteine hydrolase, NAD binding domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00997
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM00997_S-adenosyl-L-homocysteine_hydrolase,_NAD_binding_domain


id: SM01007
description: Class II Aldolase and Adducin N-terminal domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01007
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM01007_Class_II_Aldolase_and_Adducin_N-terminal_domain


id: SM01016
description: Arginyl tRNA synthetase N terminal dom
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01016
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM01016_Arginyl_tRNA_synthetase_N_terminal_dom


id: SM01072
description: Cell division protein 48 (CDC48) domain 2
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01072
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM01072_Cell_division_protein_48_(CDC48)_domain_2


id: SM01073
description: Cell division protein 48 (CDC48) N-terminal domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01073
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM01073_Cell_division_protein_48_(CDC48)_N-terminal_domain


id: SM01078
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01078
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM01078_This_putative_domain_contains_a_quite_highly_conserved_sequence_of_CGGC_in_its_central_region._The_domain_has_many_conserved_cysteines_and_histidines_suggestive_of_a_zinc_binding_function.

description:
  This putative domain contains a quite highly conserved sequence of CGGC in its central region. The domain has many conserved cysteines and histidines suggestive of a zinc binding function.


id: SM01079
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01079
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM01079_This_domain_is_found_in_the_extracellular_portion_of_receptor-like_proteins_-_such_as_serine/threonine_kinases_and_adenylyl_cyclases_PUBMED:11590000,_PUBMED:11590001._Predicted_to_be_a_ligand_binding_domain_PUBMED:11590000.

description:
  This domain is found in the extracellular portion of receptor-like proteins - such as serine/threonine kinases and adenylyl cyclases PUBMED:11590000, PUBMED:11590001. Predicted to be a ligand binding domain PUBMED:11590000.


id: SM01086
description: C-terminal, D2-small domain, of ClpB protein
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01086
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM01086_C-terminal,_D2-small_domain,_of_ClpB_protein


id: SM01096
description: Carbamoyl-phosphate synthetase large chain, oligomerisation domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01096
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM01096_Carbamoyl-phosphate_synthetase_large_chain,_oligomerisation_domain


id: SM01097
description: Carbamoyl-phosphate synthase small chain, CPSase domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01097
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM01097_Carbamoyl-phosphate_synthase_small_chain,_CPSase_domain


id: SM01103
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01103
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM01103_Escherichia_coli_YhbY_is_associated_with_pre-50S_ribosomal_subunits,_which_implies_a_function_in_ribosome_assembly._GFP_fused_to_a_single-domain_CRM_protein_from_maize_localises_to_the_nucleolus,_suggesting_that_an_analogous_activity_may_have_been_...

description:
  Escherichia coli YhbY is associated with pre-50S ribosomal subunits, which implies a function in ribosome assembly. GFP fused to a single-domain CRM protein from maize localises to the nucleolus, suggesting that an analogous activity may have been ...


id: SM01117
description: Cytochrome b5-like Heme/Steroid binding domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01117
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM01117_Cytochrome_b5-like_Heme/Steroid_binding_domain


id: SM01118
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01118
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM01118_These_sequences_are_functionally_identified_as_members_of_the_adenylate_cyclase_family,_which_catalyses_the_conversion_of_ATP_to_3,5-cyclic_AMP_and_pyrophosphate._Six_distinct_non-homologous_classes_of_AC_have_been_identified._The_structure_of_...

description:
  These sequences are functionally identified as members of the adenylate cyclase family, which catalyses the conversion of ATP to 3,5-cyclic AMP and pyrophosphate. Six distinct non-homologous classes of AC have been identified. The structure of ...


id: SM01194
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01194
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM01194_The_release_factor_eRF1_terminates_protein_biosynthesis_by_recognising_stop_codons_at_the_A_site_of_the_ribosome_and_stimulating_peptidyl-tRNA_bond_hydrolysis_at_the_peptidyl_transferase_centre._The_crystal_structure_of_human_eRF1_is_known_...

description:
  The release factor eRF1 terminates protein biosynthesis by recognising stop codons at the A site of the ribosome and stimulating peptidyl-tRNA bond hydrolysis at the peptidyl transferase centre. The crystal structure of human eRF1 is known ...


id: SM01204
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01204
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM01204_The_FIST_C_domain_is_a_novel_sensory_domain,_which_is_present_in_signal_transduction_proteins_from_Bacteria,_Archaea_and_Eukarya._Chromosomal_proximity_of_FIST-encoding_genes_to_those_coding_for_proteins_involved_in_amino_acid_metabolism_and_...

description:
  The FIST C domain is a novel sensory domain, which is present in signal transduction proteins from Bacteria, Archaea and Eukarya. Chromosomal proximity of FIST-encoding genes to those coding for proteins involved in amino acid metabolism and ...


id: SM01209
description: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01209
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM01209_Phosphoribosylglycinamide_synthetase,_ATP-grasp_(A)_domain


id: SM01210
description: Phosphoribosylglycinamide synthetase, C domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01210
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM01210_Phosphoribosylglycinamide_synthetase,_C_domain


id: SM01211
description: CobB/CobQ-like glutamine amidotransferase domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01211
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM01211_CobB/CobQ-like_glutamine_amidotransferase_domain


id: SM01230
description: Glutamine synthetase, catalytic domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01230
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM01230_Glutamine_synthetase,_catalytic_domain


id: SM01231
description: Signal transducing histidine kinase, homodimeric domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01231
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM01231_Signal_transducing_histidine_kinase,_homodimeric_domain


id: SM01325
description: This family of proteins has no known function.
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01325
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM01325_This_family_of_proteins_has_no_known_function.


id: SM01329
description: Isocitrate/isopropylmalate dehydrogenase
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01329
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM01329_Isocitrate/isopropylmalate_dehydrogenase


id: SM01340
description: DNA mismatch repair protein, C-terminal domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01340
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM01340_DNA_mismatch_repair_protein,_C-terminal_domain


id: SM01376
description: Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01376
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM01376_Eukaryotic_elongation_factor_5A_hypusine,_DNA-binding_OB_fold


id: SM01377
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01377
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM01377_Bovine_L40_has_been_identified_as_a_secondary_RNA_binding_protein_(PMID:3129699)._L40_is_fused_to_a_ubiquitin_protein_(PMID:7488009).

description:
  Bovine L40 has been identified as a secondary RNA binding protein (PMID:3129699). L40 is fused to a ubiquitin protein (PMID:7488009).


id: SM01382
description: Ribosomal Proteins L2, C-terminal domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01382
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM01382_Ribosomal_Proteins_L2,_C-terminal_domain


id: SM01383
description: Ribosomal Proteins L2, RNA binding domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01383
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM01383_Ribosomal_Proteins_L2,_RNA_binding_domain


id: SM01390
description: Ribosomal protein S4/S9 N-terminal domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01390
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM01390_Ribosomal_protein_S4/S9_N-terminal_domain


id: SM01393
description: This family includes ribosomal protein L32 from eukaryotes and archaebacteria.
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01393
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM01393_This_family_includes_ribosomal_protein_L32_from_eukaryotes_and_archaebacteria.


id: SM01400
description: N-terminal domain of ribose phosphate pyrophosphokinase
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01400
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM01400_N-terminal_domain_of_ribose_phosphate_pyrophosphokinase


id: SM01419
description: Alpha-macro-globulin thiol-ester bond-forming region
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01419
name:
  Protein Domains (SMART).STRING_v12.0_1090322_STRINGid_SM01419_Alpha-macro-globulin_thiol-ester_bond-forming_region


