# geneInfo

ensembl_gene_id: HMPREF1141_0007
symbol: rbsK
gene_biotype: protein_coding
description:
  Putative ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.


ensembl_gene_id: HMPREF1141_0008
symbol: rbsD
gene_biotype: protein_coding
description:
  RbsD/FucU transport family protein; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.


ensembl_gene_id: HMPREF1141_0009
symbol: EJF42354.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: HMPREF1141_0022
symbol: alr
gene_biotype: protein_coding
description:
  Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.


ensembl_gene_id: HMPREF1141_0046
symbol: citC_1
gene_biotype: protein_coding
description:
  [citrate (pro-3S)-lyase] ligase; Acetylation of prosthetic group (2-(5''-phosphoribosyl)-3'- dephosphocoenzyme-A) of the gamma subunit of citrate lyase.


ensembl_gene_id: HMPREF1141_0053
symbol: EJF42379.1
gene_biotype: protein_coding
description:
  Putative membrane protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error.


ensembl_gene_id: HMPREF1141_0058
symbol: EJF42389.1
gene_biotype: protein_coding
description:
  Glycosyltransferases group 1 domain protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error.


ensembl_gene_id: HMPREF1141_0059
symbol: EJF39562.1
gene_biotype: protein_coding
description:
  FTR1 family protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error.


ensembl_gene_id: HMPREF1141_0060
symbol: EJF39561.1
gene_biotype: protein_coding
description:
  Putative 34 kDa membrane antigen; This gene contains a nucleotide ambiguity which may be the result of a sequencing error.


ensembl_gene_id: HMPREF1141_0061
symbol: EJF38735.1
gene_biotype: protein_coding
description:
  Macro domain protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error.


ensembl_gene_id: HMPREF1141_0076
symbol: EJF38156.1
gene_biotype: protein_coding
description:
  VanZ-like protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error.


ensembl_gene_id: HMPREF1141_0077
symbol: glyQS
gene_biotype: protein_coding
description:
  glycine--tRNA ligase-like protein; Catalyzes the attachment of glycine to tRNA(Gly). Belongs to the class-II aminoacyl-tRNA synthetase family.


ensembl_gene_id: HMPREF1141_0105
symbol: hflX
gene_biotype: protein_coding
description:
  GTP-binding protein HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.


ensembl_gene_id: HMPREF1141_0112
symbol: EJF40311.1
gene_biotype: protein_coding
description:
  RNAse H domain protein, YqgF family; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.


ensembl_gene_id: HMPREF1141_0115
symbol: pyrK
gene_biotype: protein_coding
description:
  Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B; Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD(+).


ensembl_gene_id: HMPREF1141_0117
symbol: pyrC
gene_biotype: protein_coding
description:
  Dihydro-orotase-like protein; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.


ensembl_gene_id: HMPREF1141_0120
symbol: serC
gene_biotype: protein_coding
description:
  Phosphoserine transaminase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine.


ensembl_gene_id: HMPREF1141_0121
symbol: pdxB_1
gene_biotype: protein_coding
description:
  4-phosphoerythronate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: HMPREF1141_0154
symbol: EJF40341.1
gene_biotype: protein_coding
description:
  PF07287 domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.


ensembl_gene_id: HMPREF1141_0155
symbol: EJF40302.1
gene_biotype: protein_coding
description:
  PF14330 domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.


ensembl_gene_id: HMPREF1141_0157
symbol: EJF40361.1
gene_biotype: protein_coding
description:
  Cadherin-like beta sandwich domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.


ensembl_gene_id: HMPREF1141_0173
symbol: EJF42497.1
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase-like protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error.


ensembl_gene_id: HMPREF1141_0175
symbol: dxr
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family.


ensembl_gene_id: HMPREF1141_0177
symbol: uppS
gene_biotype: protein_coding
description:
  Di-trans,poly-cis-decaprenylcistransferase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.


ensembl_gene_id: HMPREF1141_0178
symbol: frr
gene_biotype: protein_coding
description:
  Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.


ensembl_gene_id: HMPREF1141_0181
symbol: tsf
gene_biotype: protein_coding
description:
  Translation elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.


ensembl_gene_id: HMPREF1141_0185
symbol: sigG
gene_biotype: protein_coding
description:
  RNA polymerase sigma-G factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: HMPREF1141_0190
symbol: sufS
gene_biotype: protein_coding
description:
  Cysteine desulfurase, SufS family; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.


ensembl_gene_id: HMPREF1141_0201
symbol: aspS_1
gene_biotype: protein_coding
description:
  aspartate--tRNA ligase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.


ensembl_gene_id: HMPREF1141_0202
symbol: gatC
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.


ensembl_gene_id: HMPREF1141_0203
symbol: gatA
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).


ensembl_gene_id: HMPREF1141_0204
symbol: gatB
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily.


ensembl_gene_id: HMPREF1141_0211
symbol: coaD
gene_biotype: protein_coding
description:
  Pantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.


ensembl_gene_id: HMPREF1141_0213
symbol: uvrC
gene_biotype: protein_coding
description:
  Excinuclease ABC, C subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.


ensembl_gene_id: HMPREF1141_0215
symbol: trmD
gene_biotype: protein_coding
description:
  tRNA (guanine(37)-N(1))-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.


ensembl_gene_id: HMPREF1141_0216
symbol: rimM
gene_biotype: protein_coding
description:
  16S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.


ensembl_gene_id: HMPREF1141_0219
symbol: ffh
gene_biotype: protein_coding
description:
  Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily.


ensembl_gene_id: HMPREF1141_0220
symbol: EJF42533.1
gene_biotype: protein_coding
description:
  Transcriptional regulator, YlxM/p13 family; Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a regulatory protein.


ensembl_gene_id: HMPREF1141_0222
symbol: mutS2
gene_biotype: protein_coding
description:
  MutS2 family protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.


ensembl_gene_id: HMPREF1141_0227
symbol: era
gene_biotype: protein_coding
description:
  GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.


ensembl_gene_id: HMPREF1141_0229
symbol: ybeY
gene_biotype: protein_coding
description:
  Metalloprotein, YbeY family; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.


ensembl_gene_id: HMPREF1141_0234
symbol: EJF38864.1
gene_biotype: protein_coding
description:
  UbiC transcription regulator-associated domain protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error.


ensembl_gene_id: HMPREF1141_0239
symbol: EJF38787.1
gene_biotype: protein_coding
description:
  Oligopeptide/dipeptide transporter, C-terminal domain protein; Belongs to the ABC transporter superfamily.


ensembl_gene_id: HMPREF1141_0244
symbol: EJF38832.1
gene_biotype: protein_coding
description:
  Dinitrogenase iron-molybdenum cofactor; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.


ensembl_gene_id: HMPREF1141_0245
symbol: EJF38822.1
gene_biotype: protein_coding
description:
  PF02001 family protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.


ensembl_gene_id: HMPREF1141_0251
symbol: folD
gene_biotype: protein_coding
description:
  Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain protein; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.


ensembl_gene_id: HMPREF1141_0271
symbol: EJF38866.1
gene_biotype: protein_coding
description:
  Peptidase, A24 type IV prepilin peptidase family protein; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.


ensembl_gene_id: HMPREF1141_0302
symbol: rnr
gene_biotype: protein_coding
description:
  Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.


ensembl_gene_id: HMPREF1141_0303
symbol: secG
gene_biotype: protein_coding
description:
  Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.


ensembl_gene_id: HMPREF1141_0307
symbol: hflB
gene_biotype: protein_coding
description:
  ATP-dependent metallopeptidase HflB; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family.  In the central section; belongs to the AAA ATPase family.


ensembl_gene_id: HMPREF1141_0308
symbol: hpt
gene_biotype: protein_coding
description:
  Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.


ensembl_gene_id: HMPREF1141_0309
symbol: tilS
gene_biotype: protein_coding
description:
  tRNA(Ile)-lysidine synthetase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.


ensembl_gene_id: HMPREF1141_0310
symbol: dnaB
gene_biotype: protein_coding
description:
  Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.


ensembl_gene_id: HMPREF1141_0312
symbol: EJF38834.1
gene_biotype: protein_coding
description:
  DHHA1 domain protein; Has phosphodiesterase (PDE) activity against cyclic-di-AMP (c-di-AMP); Belongs to the GdpP/PdeA phosphodiesterase family.


ensembl_gene_id: HMPREF1141_0313
symbol: rnj
gene_biotype: protein_coding
description:
  Hypothetical protein; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay.


ensembl_gene_id: HMPREF1141_0319
symbol: rpoA
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: HMPREF1141_0320
symbol: rpsD_1
gene_biotype: protein_coding
description:
  Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.


ensembl_gene_id: HMPREF1141_0321
symbol: rpsK
gene_biotype: protein_coding
description:
  30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.


ensembl_gene_id: HMPREF1141_0322
symbol: rpsM
gene_biotype: protein_coding
description:
  30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.


ensembl_gene_id: HMPREF1141_0324
symbol: infA
gene_biotype: protein_coding
description:
  Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.


ensembl_gene_id: HMPREF1141_0326
symbol: map
gene_biotype: protein_coding
description:
  Methionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.


ensembl_gene_id: HMPREF1141_0327
symbol: adk
gene_biotype: protein_coding
description:
  Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.


ensembl_gene_id: HMPREF1141_0328
symbol: secY
gene_biotype: protein_coding
description:
  Preprotein translocase, SecY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.


ensembl_gene_id: HMPREF1141_0329
symbol: rplO
gene_biotype: protein_coding
description:
  Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.


ensembl_gene_id: HMPREF1141_0331
symbol: rpsE
gene_biotype: protein_coding
description:
  Ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.


ensembl_gene_id: HMPREF1141_0332
symbol: rplR
gene_biotype: protein_coding
description:
  Ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.


ensembl_gene_id: HMPREF1141_0333
symbol: rplF
gene_biotype: protein_coding
description:
  Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.


ensembl_gene_id: HMPREF1141_0334
symbol: rpsH
gene_biotype: protein_coding
description:
  Ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.


ensembl_gene_id: HMPREF1141_0335
symbol: rpsN_1
gene_biotype: protein_coding
description:
  Ribosomal protein S14p/S29e; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.


ensembl_gene_id: HMPREF1141_0336
symbol: rplE
gene_biotype: protein_coding
description:
  Ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.


ensembl_gene_id: HMPREF1141_0337
symbol: rplX
gene_biotype: protein_coding
description:
  Ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.


ensembl_gene_id: HMPREF1141_0338
symbol: rplN
gene_biotype: protein_coding
description:
  Ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.


ensembl_gene_id: HMPREF1141_0339
symbol: rpsQ
gene_biotype: protein_coding
description:
  30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.


ensembl_gene_id: HMPREF1141_0341
symbol: rplP
gene_biotype: protein_coding
description:
  Ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.


ensembl_gene_id: HMPREF1141_0342
symbol: rpsC
gene_biotype: protein_coding
description:
  Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.


ensembl_gene_id: HMPREF1141_0343
symbol: rplV
gene_biotype: protein_coding
description:
  Ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.


ensembl_gene_id: HMPREF1141_0344
symbol: rpsS
gene_biotype: protein_coding
description:
  Ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.


ensembl_gene_id: HMPREF1141_0345
symbol: rplB
gene_biotype: protein_coding
description:
  Ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.


ensembl_gene_id: HMPREF1141_0346
symbol: rplW
gene_biotype: protein_coding
description:
  Ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.


ensembl_gene_id: HMPREF1141_0348
symbol: rplC
gene_biotype: protein_coding
description:
  50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.


ensembl_gene_id: HMPREF1141_0349
symbol: rpsJ
gene_biotype: protein_coding
description:
  Ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.


ensembl_gene_id: HMPREF1141_0354
symbol: proS
gene_biotype: protein_coding
description:
  proline--tRNA ligase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro).


ensembl_gene_id: HMPREF1141_0356
symbol: EJF38764.1
gene_biotype: protein_coding
description:
  Sodium ion-translocating decarboxylase, beta subunit; Tunnel subunit of the primary sodium pump glutaconyl-CoA decarboxylase (GCD).


ensembl_gene_id: HMPREF1141_0358
symbol: aroE
gene_biotype: protein_coding
description:
  Putative shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).


ensembl_gene_id: HMPREF1141_0359
symbol: aroK
gene_biotype: protein_coding
description:
  Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.


ensembl_gene_id: HMPREF1141_0362
symbol: aroB
gene_biotype: protein_coding
description:
  3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).


ensembl_gene_id: HMPREF1141_0363
symbol: aroA
gene_biotype: protein_coding
description:
  3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.


ensembl_gene_id: HMPREF1141_0364
symbol: aroC
gene_biotype: protein_coding
description:
  Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.


ensembl_gene_id: HMPREF1141_0370
symbol: EJF38767.1
gene_biotype: protein_coding
description:
  TOBE domain protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; Belongs to the ABC transporter superfamily.


ensembl_gene_id: HMPREF1141_0371
symbol: EJF39329.1
gene_biotype: protein_coding
description:
  ABC transporter, ATP-binding protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error.


ensembl_gene_id: HMPREF1141_0375
symbol: gltS_1
gene_biotype: protein_coding
description:
  Sodium/glutamate symporter; Catalyzes the sodium-dependent transport of glutamate. Belongs to the glutamate:Na(+) symporter (ESS) (TC 2.A.27) family.


ensembl_gene_id: HMPREF1141_0389
symbol: EJF39334.1
gene_biotype: protein_coding
description:
  Transporter PF05598 domain protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error.


ensembl_gene_id: HMPREF1141_0390
symbol: EJF41291.1
gene_biotype: protein_coding
description:
  Glycosyltransferase 4-like domain protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error.


ensembl_gene_id: HMPREF1141_0406
symbol: alaS
gene_biotype: protein_coding
description:
  alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.


ensembl_gene_id: HMPREF1141_0439
symbol: potA
gene_biotype: protein_coding
description:
  TOBE domain protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.


ensembl_gene_id: HMPREF1141_0454
symbol: cobB
gene_biotype: protein_coding
description:
  Transcriptional regulator, Sir2 family; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class U subfamily.


ensembl_gene_id: HMPREF1141_0457
symbol: spo0A
gene_biotype: protein_coding
description:
  Sporulation transcription factor Spo0A; May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process.


ensembl_gene_id: HMPREF1141_0460
symbol: lexA
gene_biotype: protein_coding
description:
  Repressor LexA; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair.


ensembl_gene_id: HMPREF1141_0464
symbol: thiI
gene_biotype: protein_coding
description:
  tRNA sulfurtransferase ThiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS.


ensembl_gene_id: HMPREF1141_0472
symbol: EJF41342.1
gene_biotype: protein_coding
description:
  Transposase DDE domain protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error.


ensembl_gene_id: HMPREF1141_0478
symbol: EJF41145.1
gene_biotype: protein_coding
description:
  sigma-E processing peptidase SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family.


ensembl_gene_id: HMPREF1141_0479
symbol: sigE
gene_biotype: protein_coding
description:
  RNA polymerase sigma-E factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: HMPREF1141_0498
symbol: trpS
gene_biotype: protein_coding
description:
  tryptophan--tRNA ligase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: HMPREF1141_0501
symbol: metA
gene_biotype: protein_coding
description:
  Homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family.


ensembl_gene_id: HMPREF1141_0503
symbol: EJF39185.1
gene_biotype: protein_coding
description:
  Transposase, IS4 family; This gene contains a nucleotide ambiguity which may be the result of a sequencing error.


ensembl_gene_id: HMPREF1141_0505
symbol: ksgA
gene_biotype: protein_coding
description:
  Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.


ensembl_gene_id: HMPREF1141_0511
symbol: EJF39203.1
gene_biotype: protein_coding
description:
  2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family.


ensembl_gene_id: HMPREF1141_0522
symbol: nfo
gene_biotype: protein_coding
description:
  Apurinic endonuclease (APN1); Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin.


ensembl_gene_id: HMPREF1141_0528
symbol: eno_1
gene_biotype: protein_coding
description:
  Phosphopyruvate hydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.


ensembl_gene_id: HMPREF1141_0533
symbol: dapF
gene_biotype: protein_coding
description:
  Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.


ensembl_gene_id: HMPREF1141_0534
symbol: dapL
gene_biotype: protein_coding
description:
  LL-diaminopimelate aminotransferase; Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL- diaminopimelate.


ensembl_gene_id: HMPREF1141_0539
symbol: purF
gene_biotype: protein_coding
description:
  Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.


ensembl_gene_id: HMPREF1141_0541
symbol: purA
gene_biotype: protein_coding
description:
  Adenylosuccinate synthase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.


ensembl_gene_id: HMPREF1141_0542
symbol: glmS
gene_biotype: protein_coding
description:
  Glutamine-fructose-6-phosphate transaminase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.


ensembl_gene_id: HMPREF1141_0556
symbol: metF_1
gene_biotype: protein_coding
description:
  Methylenetetrahydrofolate reductase (NAD(P)H); Belongs to the methylenetetrahydrofolate reductase family.


ensembl_gene_id: HMPREF1141_0557
symbol: metE
gene_biotype: protein_coding
description:
  5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family.


ensembl_gene_id: HMPREF1141_0559
symbol: pflA_1
gene_biotype: protein_coding
description:
  Pyruvate formate-lyase 1-activating enzyme; Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine; Belongs to the organic radical-activating enzymes family.


ensembl_gene_id: HMPREF1141_0562
symbol: EJF40767.1
gene_biotype: protein_coding
description:
  Putative L-ribulose-5-phosphate 4-epimerase; This gene contains a nucleotide ambiguity which may be the result of a sequencing error.


ensembl_gene_id: HMPREF1141_0573
symbol: EJF40762.1
gene_biotype: protein_coding
description:
  Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error.


ensembl_gene_id: HMPREF1141_0575
symbol: EJF41557.1
gene_biotype: protein_coding
description:
  Cyclase domain protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error.


ensembl_gene_id: HMPREF1141_0576
symbol: mtnN
gene_biotype: protein_coding
description:
  MTA/SAH nucleosidase; Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'- methylthioribose and S-ribosylhomocysteine, respectively. Belongs to the PNP/UDP phosphorylase family. MtnN subfamily.


ensembl_gene_id: HMPREF1141_0581
symbol: murD
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.


ensembl_gene_id: HMPREF1141_0594
symbol: EJF41566.1
gene_biotype: protein_coding
description:
  Phage minor capsid protein 2 domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.


ensembl_gene_id: HMPREF1141_0596
symbol: EJF41562.1
gene_biotype: protein_coding
description:
  Terminase-like domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.


ensembl_gene_id: HMPREF1141_0597
symbol: EJF41564.1
gene_biotype: protein_coding
description:
  Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.


ensembl_gene_id: HMPREF1141_0608
symbol: EJF39101.1
gene_biotype: protein_coding
description:
  Formate--tetrahydrofolate ligase domain protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error.


ensembl_gene_id: HMPREF1141_0628
symbol: EJF39104.1
gene_biotype: protein_coding
description:
  Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop.


ensembl_gene_id: HMPREF1141_0641
symbol: sigK
gene_biotype: protein_coding
description:
  RNA polymerase sigma-K factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: HMPREF1141_0653
symbol: mfd
gene_biotype: protein_coding
description:
  Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.


ensembl_gene_id: HMPREF1141_0655
symbol: pth
gene_biotype: protein_coding
description:
  aminoacyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.


ensembl_gene_id: HMPREF1141_0656
symbol: prs
gene_biotype: protein_coding
description:
  Ribose-phosphate diphosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.


ensembl_gene_id: HMPREF1141_0672
symbol: gpr
gene_biotype: protein_coding
description:
  GPR endopeptidase-like protein; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.


ensembl_gene_id: HMPREF1141_0691
symbol: EJF42206.1
gene_biotype: protein_coding
description:
  Periplasmic solute-binding family protein; Belongs to the bacterial solute-binding protein 9 family.


ensembl_gene_id: HMPREF1141_0703
symbol: ddl
gene_biotype: protein_coding
description:
  D-ala D-ala ligase N-terminal domain protein; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.


ensembl_gene_id: HMPREF1141_0707
symbol: secE
gene_biotype: protein_coding
description:
  Preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.


ensembl_gene_id: HMPREF1141_0708
symbol: nusG
gene_biotype: protein_coding
description:
  Transcription termination/antitermination factor NusG; Participates in transcription elongation, termination and antitermination.


ensembl_gene_id: HMPREF1141_0709
symbol: rplK
gene_biotype: protein_coding
description:
  Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.


ensembl_gene_id: HMPREF1141_0710
symbol: rplA
gene_biotype: protein_coding
description:
  Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.


ensembl_gene_id: HMPREF1141_0712
symbol: rplJ
gene_biotype: protein_coding
description:
  Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.


ensembl_gene_id: HMPREF1141_0713
symbol: rplL
gene_biotype: protein_coding
description:
  Ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.


ensembl_gene_id: HMPREF1141_0729
symbol: recG
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.


ensembl_gene_id: HMPREF1141_0737
symbol: EJF42209.1
gene_biotype: protein_coding
description:
  Putative autoinducer 2 ABC transporter, permease protein LsrC; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: HMPREF1141_0738
symbol: EJF42157.1
gene_biotype: protein_coding
description:
  Putative autoinducer 2 ABC transporter, permease protein LsrD; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: HMPREF1141_0752
symbol: trmB
gene_biotype: protein_coding
description:
  tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.


ensembl_gene_id: HMPREF1141_0764
symbol: aroQ
gene_biotype: protein_coding
description:
  3-dehydroquinate dehydratase, type II; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.


ensembl_gene_id: HMPREF1141_0768
symbol: efp
gene_biotype: protein_coding
description:
  Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.


ensembl_gene_id: HMPREF1141_0798
symbol: EJF42443.1
gene_biotype: protein_coding
description:
  E1-E2 ATPase; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.


ensembl_gene_id: HMPREF1141_0806
symbol: dpaB
gene_biotype: protein_coding
description:
  Dipicolinic acid synthetase, B subunit; Together with DpaA, catalyzes the conversion of dihydrodipicolinate to dipicolinate (DPA).


ensembl_gene_id: HMPREF1141_0826
symbol: EJF42425.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid ABC transporter, permease protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: HMPREF1141_0827
symbol: EJF42299.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid ABC transporter, permease domain protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: HMPREF1141_0833
symbol: recD2
gene_biotype: protein_coding
description:
  Helicase, RecD/TraA family; DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity; Belongs to the RecD family. RecD-like subfamily.


ensembl_gene_id: HMPREF1141_0835
symbol: metK_1
gene_biotype: protein_coding
description:
  Methionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.


ensembl_gene_id: HMPREF1141_0837
symbol: EJF42297.1
gene_biotype: protein_coding
description:
  PF12822 family protein; Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins; Belongs to the prokaryotic riboflavin transporter (P-RFT) (TC 2.A.87) family.


ensembl_gene_id: HMPREF1141_0839
symbol: tuf
gene_biotype: protein_coding
description:
  Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.


ensembl_gene_id: HMPREF1141_0840
symbol: fusA
gene_biotype: protein_coding
description:
  Translation elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 s [...]


ensembl_gene_id: HMPREF1141_0841
symbol: rpsG
gene_biotype: protein_coding
description:
  Ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.


ensembl_gene_id: HMPREF1141_0842
symbol: rpsL
gene_biotype: protein_coding
description:
  Ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.


ensembl_gene_id: HMPREF1141_0843
symbol: rpoC
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: HMPREF1141_0844
symbol: rpoB
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: HMPREF1141_0845
symbol: EJF42285.1
gene_biotype: protein_coding
description:
  ParA/MinD ATPase-like protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.


ensembl_gene_id: HMPREF1141_0860
symbol: glpK
gene_biotype: protein_coding
description:
  Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.


ensembl_gene_id: HMPREF1141_0869
symbol: EJF38408.1
gene_biotype: protein_coding
description:
  Nitroreductase family protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error.


ensembl_gene_id: HMPREF1141_0889
symbol: trpA
gene_biotype: protein_coding
description:
  Tryptophan synthase, alpha subunit; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.


ensembl_gene_id: HMPREF1141_0890
symbol: trpB
gene_biotype: protein_coding
description:
  Tryptophan synthase, beta subunit; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.


ensembl_gene_id: HMPREF1141_0891
symbol: trpF
gene_biotype: protein_coding
description:
  N-(5'phosphoribosyl)anthranilate isomerase; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; Belongs to the TrpF family.


ensembl_gene_id: HMPREF1141_0893
symbol: trpD
gene_biotype: protein_coding
description:
  Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).


ensembl_gene_id: HMPREF1141_0895
symbol: trpE
gene_biotype: protein_coding
description:
  Anthranilate synthase component I; Part of a heterotetrameric complex that catalyzes the two- step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine-binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentr [...]


ensembl_gene_id: HMPREF1141_0924
symbol: nagB
gene_biotype: protein_coding
description:
  Glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion.


ensembl_gene_id: HMPREF1141_0929
symbol: EJF38427.1
gene_biotype: protein_coding
description:
  Cytosol aminopeptidase family, catalytic domain protein; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides. Belongs to the peptidase M17 family.


ensembl_gene_id: HMPREF1141_0930
symbol: EJF38383.1
gene_biotype: protein_coding
description:
  Oligopeptide/dipeptide transporter, C-terminal domain protein; Overlaps another CDS with the same product name; Belongs to the ABC transporter superfamily.


ensembl_gene_id: HMPREF1141_0937
symbol: EJF38392.1
gene_biotype: protein_coding
description:
  Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by glimmer; putative.


ensembl_gene_id: HMPREF1141_0957
symbol: etfA_1
gene_biotype: protein_coding
description:
  Electron transfer flavoprotein, alpha subunit; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.


ensembl_gene_id: HMPREF1141_0975
symbol: EJF38390.1
gene_biotype: protein_coding
description:
  Bacterial Ig-like domain, group 4; This gene contains a nucleotide ambiguity which may be the result of a sequencing error.


ensembl_gene_id: HMPREF1141_0976
symbol: EJF41603.1
gene_biotype: protein_coding
description:
  Putative phosphoglycolate phosphatase, bacterial; This gene contains a nucleotide ambiguity which may be the result of a sequencing error.


ensembl_gene_id: HMPREF1141_1004
symbol: dnaX
gene_biotype: protein_coding
description:
  DNA polymerase III, subunit gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: HMPREF1141_1005
symbol: EJF42554.1
gene_biotype: protein_coding
description:
  DNA-binding protein, YbaB/EbfC family; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.


ensembl_gene_id: HMPREF1141_1006
symbol: recR
gene_biotype: protein_coding
description:
  Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.


ensembl_gene_id: HMPREF1141_1007
symbol: smpB
gene_biotype: protein_coding
description:
  SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...]


ensembl_gene_id: HMPREF1141_1019
symbol: hppA
gene_biotype: protein_coding
description:
  Putative V-type H(+)-translocating pyrophosphatase; Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force.


ensembl_gene_id: HMPREF1141_1030
symbol: coaE
gene_biotype: protein_coding
description:
  dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.


ensembl_gene_id: HMPREF1141_1031
symbol: EJF42570.1
gene_biotype: protein_coding
description:
  tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.


ensembl_gene_id: HMPREF1141_1032
symbol: prfA
gene_biotype: protein_coding
description:
  Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.


ensembl_gene_id: HMPREF1141_1035
symbol: birA
gene_biotype: protein_coding
description:
  biotin-(acetyl-CoA-carboxylase) ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.


ensembl_gene_id: HMPREF1141_1038
symbol: thrB
gene_biotype: protein_coding
description:
  Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily.


ensembl_gene_id: HMPREF1141_1058
symbol: rpsN_2
gene_biotype: protein_coding
description:
  Ribosomal protein S14p/S29e; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.


ensembl_gene_id: HMPREF1141_1064
symbol: EJF40932.1
gene_biotype: protein_coding
description:
  Drug resistance MFS transporter, drug:H+ antiporter-2 family; Belongs to the major facilitator superfamily.


ensembl_gene_id: HMPREF1141_1079
symbol: mltG
gene_biotype: protein_coding
description:
  YceG family protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation.


ensembl_gene_id: HMPREF1141_1084
symbol: nnrD
gene_biotype: protein_coding
description:
  YjeF family C-terminal domain protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. In the C-terminal section; belongs to the NnrD/CARKD family.


ensembl_gene_id: HMPREF1141_1085
symbol: acpS
gene_biotype: protein_coding
description:
  Holo-[acyl-carrier-protein] synthase; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family.


ensembl_gene_id: HMPREF1141_1094
symbol: metG
gene_biotype: protein_coding
description:
  methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.


ensembl_gene_id: HMPREF1141_1112
symbol: rumA
gene_biotype: protein_coding
description:
  23S rRNA (uracil-5-)-methyltransferase RumA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.


ensembl_gene_id: HMPREF1141_1117
symbol: phoU
gene_biotype: protein_coding
description:
  Phosphate transport system regulatory protein PhoU; Plays a role in the regulation of phosphate uptake.


ensembl_gene_id: HMPREF1141_1118
symbol: pstB
gene_biotype: protein_coding
description:
  Phosphate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.


ensembl_gene_id: HMPREF1141_1120
symbol: pstC
gene_biotype: protein_coding
description:
  Phosphate ABC transporter, permease protein PstC; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: HMPREF1141_1128
symbol: prfC
gene_biotype: protein_coding
description:
  Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.


ensembl_gene_id: HMPREF1141_1138
symbol: dapA_1
gene_biotype: protein_coding
description:
  Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).


ensembl_gene_id: HMPREF1141_1152
symbol: EJF40641.1
gene_biotype: protein_coding
description:
  DNA-binding domain, methylated-DNA-[protein]-cysteine S-methyltransferase family protein; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated.


ensembl_gene_id: HMPREF1141_1157
symbol: EJF40690.1
gene_biotype: protein_coding
description:
  Iron chelate uptake ABC transporter, FeCT family, permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: HMPREF1141_1160
symbol: cdd
gene_biotype: protein_coding
description:
  Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: HMPREF1141_1161
symbol: deoC
gene_biotype: protein_coding
description:
  Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.


ensembl_gene_id: HMPREF1141_1167
symbol: deoB
gene_biotype: protein_coding
description:
  Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family.


ensembl_gene_id: HMPREF1141_1174
symbol: yeiN
gene_biotype: protein_coding
description:
  UPF0724 protein YeiN; Catalyzes the reversible cleavage of pseudouridine 5'- phosphate (PsiMP) to ribose 5-phosphate and uracil. Functions biologically in the cleavage direction, as part of a pseudouridine degradation pathway; Belongs to the pseudouridine-5'-phosphate glycosidase family.


ensembl_gene_id: HMPREF1141_1193
symbol: accC
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase, biotin carboxylase subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: HMPREF1141_1198
symbol: pxpA
gene_biotype: protein_coding
description:
  LamB/YcsF family protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.


ensembl_gene_id: HMPREF1141_1229
symbol: EJF40582.1
gene_biotype: protein_coding
description:
  Putative oligopeptide ABC transporter, ATP-binding protein OppF; Belongs to the ABC transporter superfamily.


ensembl_gene_id: HMPREF1141_1283
symbol: EJF40599.1
gene_biotype: protein_coding
description:
  Putative 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring); Belongs to the CoA-transferase III family.


ensembl_gene_id: HMPREF1141_1299
symbol: EJF41433.1
gene_biotype: protein_coding
description:
  Copper-exporting ATPase; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.


ensembl_gene_id: HMPREF1141_1300
symbol: EJF41423.1
gene_biotype: protein_coding
description:
  Heavy metal-associated domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.


ensembl_gene_id: HMPREF1141_1306
symbol: fsa
gene_biotype: protein_coding
description:
  Fructose-6-phosphate aldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.


ensembl_gene_id: HMPREF1141_1320
symbol: EJF41417.1
gene_biotype: protein_coding
description:
  RHS repeat-associated core domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.


ensembl_gene_id: HMPREF1141_1330
symbol: EJF41408.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid ABC transporter, permease protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: HMPREF1141_1335
symbol: kdpA
gene_biotype: protein_coding
description:
  K+-transporting ATPase, A subunit; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane.


ensembl_gene_id: HMPREF1141_1336
symbol: kdpB
gene_biotype: protein_coding
description:
  K+-transporting ATPase, B subunit; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system. Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IA subfamily.


ensembl_gene_id: HMPREF1141_1337
symbol: kdpC
gene_biotype: protein_coding
description:
  K+-transporting ATPase, C subunit; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP-binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB/KdpC/ATP ternary complex.


ensembl_gene_id: HMPREF1141_1338
symbol: EJF41827.1
gene_biotype: protein_coding
description:
  Osmosensitive K+ channel His kinase sensor domain protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error.


ensembl_gene_id: HMPREF1141_1340
symbol: uppP
gene_biotype: protein_coding
description:
  Undecaprenyl-diphosphatase UppP; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.


ensembl_gene_id: HMPREF1141_1360
symbol: mprF
gene_biotype: protein_coding
description:
  Membrane protein, PF03706 family; Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms.


ensembl_gene_id: HMPREF1141_1368
symbol: prmC
gene_biotype: protein_coding
description:
  protein-(glutamine-N5) methyltransferase, release factor-specific; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.


ensembl_gene_id: HMPREF1141_1369
symbol: recA
gene_biotype: protein_coding
description:
  RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.


ensembl_gene_id: HMPREF1141_1371
symbol: rimO
gene_biotype: protein_coding
description:
  Ribosomal protein S12 methylthiotransferase RimO; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.


ensembl_gene_id: HMPREF1141_1372
symbol: pgsA
gene_biotype: protein_coding
description:
  CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: HMPREF1141_1384
symbol: hisD_1
gene_biotype: protein_coding
description:
  Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.


ensembl_gene_id: HMPREF1141_1396
symbol: EJF41845.1
gene_biotype: protein_coding
description:
  Transporter, lactate permease family; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.


ensembl_gene_id: HMPREF1141_1414
symbol: EJF42466.1
gene_biotype: protein_coding
description:
  TIM-barrel protein, nifR3 family; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.


ensembl_gene_id: HMPREF1141_1415
symbol: polA
gene_biotype: protein_coding
description:
  DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.


ensembl_gene_id: HMPREF1141_1417
symbol: rimI
gene_biotype: protein_coding
description:
  Ribosomal-protein-alanine acetyltransferase; Acetylates the N-terminal alanine of ribosomal protein S18.


ensembl_gene_id: HMPREF1141_1419
symbol: tsaD
gene_biotype: protein_coding
description:
  tRNA threonylcarbamoyl adenosine modification protein YgjD; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.


ensembl_gene_id: HMPREF1141_1420
symbol: pckG
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate carboxykinase (GTP); Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle; Belongs to the phosphoenolpyruvate carboxykinase [GTP] family.


ensembl_gene_id: HMPREF1141_1421
symbol: EJF42463.1
gene_biotype: protein_coding
description:
  Glu/Leu/Phe/Val dehydrogenase, dimerization domain protein; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.


ensembl_gene_id: HMPREF1141_1425
symbol: folP
gene_biotype: protein_coding
description:
  Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives.


ensembl_gene_id: HMPREF1141_1426
symbol: folB
gene_biotype: protein_coding
description:
  Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.


ensembl_gene_id: HMPREF1141_1430
symbol: EJF41898.1
gene_biotype: protein_coding
description:
  ABC transporter, ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Methionine importer (TC 3.A.1.24) family.


ensembl_gene_id: HMPREF1141_1431
symbol: luxS_1
gene_biotype: protein_coding
description:
  S-ribosylhomocysteinase LuxS; Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5-dihydroxy-2,3-pentadione (DPD). Belongs to the LuxS family.


ensembl_gene_id: HMPREF1141_1435
symbol: metN
gene_biotype: protein_coding
description:
  ABC transporter, ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.


ensembl_gene_id: HMPREF1141_1442
symbol: crcB_1
gene_biotype: protein_coding
description:
  Protein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.


ensembl_gene_id: HMPREF1141_1444
symbol: ppa_1
gene_biotype: protein_coding
description:
  Inorganic diphosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.


ensembl_gene_id: HMPREF1141_1449
symbol: rsgA_1
gene_biotype: protein_coding
description:
  Ribosome small subunit-dependent GTPase A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.


ensembl_gene_id: HMPREF1141_1462
symbol: EJF41782.1
gene_biotype: protein_coding
description:
  DNA-binding helix-turn-helix protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error.


ensembl_gene_id: HMPREF1141_1467
symbol: aspS_2
gene_biotype: protein_coding
description:
  aspartate--tRNA ligase; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor end of tRNA(Asp). Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.


ensembl_gene_id: HMPREF1141_1491
symbol: glgP_1
gene_biotype: protein_coding
description:
  Phosphorylase, glycogen/starch/alpha-glucan family; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.


ensembl_gene_id: HMPREF1141_1495
symbol: dut
gene_biotype: protein_coding
description:
  dUTP diphosphatase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family.


ensembl_gene_id: HMPREF1141_1498
symbol: nrdR
gene_biotype: protein_coding
description:
  Transcriptional regulator NrdR; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family.


ensembl_gene_id: HMPREF1141_1541
symbol: valS
gene_biotype: protein_coding
description:
  valine--tRNA ligase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.


ensembl_gene_id: HMPREF1141_1545
symbol: spoIIAB
gene_biotype: protein_coding
description:
  Anti-sigma F factor; Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition.


ensembl_gene_id: HMPREF1141_1548
symbol: mraW_1
gene_biotype: protein_coding
description:
  S-adenosyl-methyltransferase MraW; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.


ensembl_gene_id: HMPREF1141_1553
symbol: mraY
gene_biotype: protein_coding
description:
  phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.


ensembl_gene_id: HMPREF1141_1555
symbol: murG
gene_biotype: protein_coding
description:
  Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.


ensembl_gene_id: HMPREF1141_1556
symbol: murA_1
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.


ensembl_gene_id: HMPREF1141_1558
symbol: ftsZ
gene_biotype: protein_coding
description:
  Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.


ensembl_gene_id: HMPREF1141_1563
symbol: EJF40467.1
gene_biotype: protein_coding
description:
  Cation diffusion facilitator family transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.


ensembl_gene_id: HMPREF1141_1565
symbol: ade
gene_biotype: protein_coding
description:
  Adenine deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family.


ensembl_gene_id: HMPREF1141_1569
symbol: coaX
gene_biotype: protein_coding
description:
  Putative pantothenate kinase, type III; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.


ensembl_gene_id: HMPREF1141_1592
symbol: fliD
gene_biotype: protein_coding
description:
  Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.


ensembl_gene_id: HMPREF1141_1603
symbol: cheB
gene_biotype: protein_coding
description:
  Protein-glutamate methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.


ensembl_gene_id: HMPREF1141_1611
symbol: iolC
gene_biotype: protein_coding
description:
  5-dehydro-2-deoxygluconokinase; Catalyzes the phosphorylation of 5-dehydro-2-deoxy-D- gluconate (2-deoxy-5-keto-D-gluconate or DKG) to 6-phospho-5-dehydro-2- deoxy-D-gluconate (DKGP).


ensembl_gene_id: HMPREF1141_1631
symbol: speE
gene_biotype: protein_coding
description:
  Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.


ensembl_gene_id: HMPREF1141_1633
symbol: speD
gene_biotype: protein_coding
description:
  S-adenosylmethionine decarboxylase proenzyme; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the prokaryotic AdoMetDC family. Type 2 subfamily.


ensembl_gene_id: HMPREF1141_1642
symbol: mcsB
gene_biotype: protein_coding
description:
  ATP:guanido phosphotransferase, C-terminal catalytic domain protein; Catalyzes the specific phosphorylation of arginine residues in proteins.


ensembl_gene_id: HMPREF1141_1649
symbol: pyrG
gene_biotype: protein_coding
description:
  CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.


ensembl_gene_id: HMPREF1141_1654
symbol: rex
gene_biotype: protein_coding
description:
  DNA-binding protein N-terminal domain protein; Modulates transcription in response to changes in cellular NADH/NAD(+) redox state.


ensembl_gene_id: HMPREF1141_1660
symbol: EJF42255.1
gene_biotype: protein_coding
description:
  Putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; Belongs to the IspG family.


ensembl_gene_id: HMPREF1141_1661
symbol: polC
gene_biotype: protein_coding
description:
  DNA polymerase III, alpha subunit, Gram-positive type; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: HMPREF1141_1662
symbol: hisZ
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase, regulatory subunit; Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine.


ensembl_gene_id: HMPREF1141_1663
symbol: hisG
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Short subfamily.


ensembl_gene_id: HMPREF1141_1665
symbol: hisC
gene_biotype: protein_coding
description:
  Histidinol-phosphate transaminase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.


ensembl_gene_id: HMPREF1141_1667
symbol: hisA
gene_biotype: protein_coding
description:
  1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase.


ensembl_gene_id: HMPREF1141_1668
symbol: hisI
gene_biotype: protein_coding
description:
  phosphoribosyl-AMP cyclohydrolase; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP.


ensembl_gene_id: HMPREF1141_1669
symbol: hisE
gene_biotype: protein_coding
description:
  phosphoribosyl-ATP diphosphatase; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.


ensembl_gene_id: HMPREF1141_1670
symbol: EJF42257.1
gene_biotype: protein_coding
description:
  Integrase core domain protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error.


ensembl_gene_id: HMPREF1141_1695
symbol: EJF42693.1
gene_biotype: protein_coding
description:
  2-hydroxyglutaryl-CoA dehydratase, D-component-like protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop.


ensembl_gene_id: HMPREF1141_1696
symbol: EJF42628.1
gene_biotype: protein_coding
description:
  Putative 2-hydroxyglutaryl-CoA dehydratase, D-component; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop.


ensembl_gene_id: HMPREF1141_1697
symbol: mscL
gene_biotype: protein_coding
description:
  Large conductance mechanosensitive channel protein; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell.


ensembl_gene_id: HMPREF1141_1705
symbol: EJF42669.1
gene_biotype: protein_coding
description:
  Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.


ensembl_gene_id: HMPREF1141_1707
symbol: gcdB
gene_biotype: protein_coding
description:
  glutaconyl-CoA decarboxylase subunit beta; Tunnel subunit of the primary sodium pump glutaconyl-CoA decarboxylase (GCD).


ensembl_gene_id: HMPREF1141_1729
symbol: nadE
gene_biotype: protein_coding
description:
  Putative NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.


ensembl_gene_id: HMPREF1141_1742
symbol: EJF42633.1
gene_biotype: protein_coding
description:
  TIR domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.


ensembl_gene_id: HMPREF1141_1746
symbol: corA
gene_biotype: protein_coding
description:
  Magnesium and cobalt transport protein CorA; Mediates influx of magnesium ions. Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.


ensembl_gene_id: HMPREF1141_1750
symbol: EJF42649.1
gene_biotype: protein_coding
description:
  Diaminopimelate dehydrogenase; Catalyzes the reversible NADPH-dependent reductive amination of L-2-amino-6-oxopimelate, the acyclic form of L- tetrahydrodipicolinate, to generate the meso compound, D,L-2,6- diaminopimelate.


ensembl_gene_id: HMPREF1141_1760
symbol: rpoD
gene_biotype: protein_coding
description:
  RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.


ensembl_gene_id: HMPREF1141_1761
symbol: dnaG
gene_biotype: protein_coding
description:
  DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.


ensembl_gene_id: HMPREF1141_1788
symbol: ilvC
gene_biotype: protein_coding
description:
  Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate.


ensembl_gene_id: HMPREF1141_1795
symbol: ychF
gene_biotype: protein_coding
description:
  GTP-binding protein YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.


ensembl_gene_id: HMPREF1141_1799
symbol: rsmI
gene_biotype: protein_coding
description:
  S-adenosylmethionine-dependent methyltransferase, YraL family; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.


ensembl_gene_id: HMPREF1141_1824
symbol: pdxS
gene_biotype: protein_coding
description:
  Pyridoxal 5'-phosphate synthase, synthase subunit Pdx1; Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5- phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively. Belongs to the PdxS/SNZ family.


ensembl_gene_id: HMPREF1141_1825
symbol: pdxT
gene_biotype: protein_coding
description:
  Pyridoxal 5'-phosphate synthase, glutaminase subunit Pdx2; Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS.


ensembl_gene_id: HMPREF1141_1857
symbol: proA
gene_biotype: protein_coding
description:
  Glutamate-5-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.


ensembl_gene_id: HMPREF1141_1858
symbol: proB
gene_biotype: protein_coding
description:
  Putative glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.


ensembl_gene_id: HMPREF1141_1862
symbol: pnp
gene_biotype: protein_coding
description:
  Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.


ensembl_gene_id: HMPREF1141_1863
symbol: rpsO
gene_biotype: protein_coding
description:
  Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.


ensembl_gene_id: HMPREF1141_1865
symbol: truB
gene_biotype: protein_coding
description:
  tRNA pseudouridine(55) synthase; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.


ensembl_gene_id: HMPREF1141_1867
symbol: rbfA
gene_biotype: protein_coding
description:
  Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.


ensembl_gene_id: HMPREF1141_1868
symbol: infB
gene_biotype: protein_coding
description:
  Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.


ensembl_gene_id: HMPREF1141_1871
symbol: nusA
gene_biotype: protein_coding
description:
  Transcription termination factor NusA; Participates in both transcription termination and antitermination.


ensembl_gene_id: HMPREF1141_1872
symbol: rimP
gene_biotype: protein_coding
description:
  Hypothetical protein; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.


ensembl_gene_id: HMPREF1141_1878
symbol: EJF41179.1
gene_biotype: protein_coding
description:
  NQR2 and RnfD family protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family.


ensembl_gene_id: HMPREF1141_1885
symbol: hppA-2
gene_biotype: protein_coding
description:
  V-type H(+)-translocating pyrophosphatase; Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na(+) movement across the membrane. Belongs to the H(+)-translocating pyrophosphatase (TC 3.A.10) family. K(+)-stimulated subfamily.


ensembl_gene_id: HMPREF1141_1897
symbol: rplM
gene_biotype: protein_coding
description:
  Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.


ensembl_gene_id: HMPREF1141_1923
symbol: rnz
gene_biotype: protein_coding
description:
  Putative ribonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family.


ensembl_gene_id: HMPREF1141_1937
symbol: EJF39607.1
gene_biotype: protein_coding
description:
  Putative superoxide dismutase, Mn; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.


ensembl_gene_id: HMPREF1141_1938
symbol: EJF39617.1
gene_biotype: protein_coding
description:
  Methyltransferase domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.


ensembl_gene_id: HMPREF1141_1945
symbol: EJF39696.1
gene_biotype: protein_coding
description:
  Cobalt transport domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.


ensembl_gene_id: HMPREF1141_2005
symbol: EJF39600.1
gene_biotype: protein_coding
description:
  FeoA domain protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error.


ensembl_gene_id: HMPREF1141_2006
symbol: EJF38546.1
gene_biotype: protein_coding
description:
  Membrane protein, PF10080 family; This gene contains a nucleotide ambiguity which may be the result of a sequencing error.


ensembl_gene_id: HMPREF1141_2011
symbol: EJF38576.1
gene_biotype: protein_coding
description:
  ApbE family protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.


ensembl_gene_id: HMPREF1141_2016
symbol: EJF38580.1
gene_biotype: protein_coding
description:
  S-adenosyl-L-homocysteine hydrolase, NAD binding-like domain protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: HMPREF1141_2051
symbol: EJF38534.1
gene_biotype: protein_coding
description:
  ABC transporter, phosphonate, periplasmic substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: HMPREF1141_2056
symbol: ilvA
gene_biotype: protein_coding
description:
  Threonine ammonia-lyase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA.


ensembl_gene_id: HMPREF1141_2072
symbol: EJF38563.1
gene_biotype: protein_coding
description:
  Putative spore maturation protein A; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.


ensembl_gene_id: HMPREF1141_2073
symbol: EJF38522.1
gene_biotype: protein_coding
description:
  Putative spore maturation protein B; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.


ensembl_gene_id: HMPREF1141_2082
symbol: ileS
gene_biotype: protein_coding
description:
  isoleucine--tRNA ligase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 2 subfamily.


ensembl_gene_id: HMPREF1141_2084
symbol: ppnP
gene_biotype: protein_coding
description:
  PF06865 family protein; Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions.


ensembl_gene_id: HMPREF1141_2087
symbol: EJF38587.1
gene_biotype: protein_coding
description:
  Putative GTP diphosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.


ensembl_gene_id: HMPREF1141_2103
symbol: raiA
gene_biotype: protein_coding
description:
  Ribosomal subunit interface protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.


ensembl_gene_id: HMPREF1141_2106
symbol: groS
gene_biotype: protein_coding
description:
  Chaperonin GroS; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.


ensembl_gene_id: HMPREF1141_2107
symbol: groL
gene_biotype: protein_coding
description:
  Chaperonin GroL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.


ensembl_gene_id: HMPREF1141_2110
symbol: agcS_3
gene_biotype: protein_coding
description:
  Amino acid carrier protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error.


ensembl_gene_id: HMPREF1141_2115
symbol: purE
gene_biotype: protein_coding
description:
  Phosphoribosylaminoimidazole carboxylase, catalytic subunit; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).


ensembl_gene_id: HMPREF1141_2117
symbol: purN
gene_biotype: protein_coding
description:
  Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.


ensembl_gene_id: HMPREF1141_2147
symbol: thiC
gene_biotype: protein_coding
description:
  Thiamine biosynthesis protein ThiC; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. Belongs to the ThiC family.


ensembl_gene_id: HMPREF1141_2148
symbol: thiM
gene_biotype: protein_coding
description:
  Hydroxyethylthiazole kinase; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family.


ensembl_gene_id: HMPREF1141_2149
symbol: thiE_1
gene_biotype: protein_coding
description:
  Thiamine-phosphate diphosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.


ensembl_gene_id: HMPREF1141_2162
symbol: EJF39717.1
gene_biotype: protein_coding
description:
  Transposase IS200-like domain protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error.


ensembl_gene_id: HMPREF1141_2173
symbol: EJF39719.1
gene_biotype: protein_coding
description:
  NADP oxidoreductase coenzyme F420-dependent; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: HMPREF1141_2175
symbol: pyrB
gene_biotype: protein_coding
description:
  Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.


ensembl_gene_id: HMPREF1141_2184
symbol: prmA
gene_biotype: protein_coding
description:
  Ribosomal protein L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family.


ensembl_gene_id: HMPREF1141_2186
symbol: thiM-2
gene_biotype: protein_coding
description:
  Putative hydroxyethylthiazole kinase; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family.


ensembl_gene_id: HMPREF1141_2193
symbol: miaB
gene_biotype: protein_coding
description:
  tRNA-i(6)A37 thiotransferase enzyme MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.


ensembl_gene_id: HMPREF1141_2195
symbol: mutS
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.


ensembl_gene_id: HMPREF1141_2196
symbol: mutL
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.


ensembl_gene_id: HMPREF1141_2197
symbol: miaA
gene_biotype: protein_coding
description:
  tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.


ensembl_gene_id: HMPREF1141_2199
symbol: EJF41735.1
gene_biotype: protein_coding
description:
  Pyridoxal phosphate enzyme, YggS family; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.


ensembl_gene_id: HMPREF1141_2200
symbol: sepF
gene_biotype: protein_coding
description:
  PF04472 family protein; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA.


ensembl_gene_id: HMPREF1141_2203
symbol: lspA
gene_biotype: protein_coding
description:
  Signal peptidase II; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.


ensembl_gene_id: HMPREF1141_2204
symbol: EJF41698.1
gene_biotype: protein_coding
description:
  Pseudouridine synthase, RluA family; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: HMPREF1141_2210
symbol: pfkA-2
gene_biotype: protein_coding
description:
  Phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. Mixed-substrate PFK group III subfamily.


ensembl_gene_id: HMPREF1141_2211
symbol: ppk1
gene_biotype: protein_coding
description:
  Polyphosphate kinase 1; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.


ensembl_gene_id: HMPREF1141_2214
symbol: thyX
gene_biotype: protein_coding
description:
  Thymidylate synthase, flavin-dependent; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant.


ensembl_gene_id: HMPREF1141_2217
symbol: EJF41714.1
gene_biotype: protein_coding
description:
  Acetyltransferase, GNAT family; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.


ensembl_gene_id: HMPREF1141_2220
symbol: mltG-2
gene_biotype: protein_coding
description:
  YceG family protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family.


ensembl_gene_id: HMPREF1141_2229
symbol: glyA_1
gene_biotype: protein_coding
description:
  Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.


ensembl_gene_id: HMPREF1141_2278
symbol: EJF39298.1
gene_biotype: protein_coding
description:
  Alpha/beta hydrolase domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.


ensembl_gene_id: HMPREF1141_2292
symbol: serS
gene_biotype: protein_coding
description:
  serine--tRNA ligase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).


ensembl_gene_id: HMPREF1141_2297
symbol: gidB
gene_biotype: protein_coding
description:
  16S rRNA (guanine(527)-N(7))-methyltransferase GidB; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.


ensembl_gene_id: HMPREF1141_2298
symbol: gidA
gene_biotype: protein_coding
description:
  tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.


ensembl_gene_id: HMPREF1141_2299
symbol: trmE
gene_biotype: protein_coding
description:
  tRNA modification GTPase TrmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.


ensembl_gene_id: HMPREF1141_2302
symbol: EJF39247.1
gene_biotype: protein_coding
description:
  YidD family protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.


ensembl_gene_id: HMPREF1141_2303
symbol: rnpA
gene_biotype: protein_coding
description:
  Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.


ensembl_gene_id: HMPREF1141_2305
symbol: dnaA
gene_biotype: protein_coding
description:
  Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.


ensembl_gene_id: HMPREF1141_2306
symbol: dnaN
gene_biotype: protein_coding
description:
  DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]


ensembl_gene_id: HMPREF1141_2308
symbol: recF
gene_biotype: protein_coding
description:
  DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family.


ensembl_gene_id: HMPREF1141_2311
symbol: gyrB
gene_biotype: protein_coding
description:
  DNA gyrase, B subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: HMPREF1141_2315
symbol: gyrA
gene_biotype: protein_coding
description:
  DNA gyrase, A subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: HMPREF1141_2333
symbol: nrdG
gene_biotype: protein_coding
description:
  Anaerobic ribonucleoside-triphosphate reductase activating protein; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine.


ensembl_gene_id: HMPREF1141_2337
symbol: EJF40963.1
gene_biotype: protein_coding
description:
  TIGR00268 family protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error.


ensembl_gene_id: HMPREF1141_2338
symbol: larC
gene_biotype: protein_coding
description:
  TIGR00299 family protein; Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2+), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor-dependent enzymes. Belongs to the LarC family.


ensembl_gene_id: HMPREF1141_2342
symbol: pncB
gene_biotype: protein_coding
description:
  Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family.


ensembl_gene_id: HMPREF1141_2351
symbol: EJF38493.1
gene_biotype: protein_coding
description:
  Sodium/calcium exchanger protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error.


ensembl_gene_id: HMPREF1141_2364
symbol: ribD
gene_biotype: protein_coding
description:
  Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.


ensembl_gene_id: HMPREF1141_2366
symbol: ribB
gene_biotype: protein_coding
description:
  3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.


ensembl_gene_id: HMPREF1141_2367
symbol: ribH
gene_biotype: protein_coding
description:
  6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.


ensembl_gene_id: HMPREF1141_2398
symbol: murE
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan.


ensembl_gene_id: HMPREF1141_2399
symbol: murF
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.


ensembl_gene_id: HMPREF1141_2411
symbol: ispD
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP).


ensembl_gene_id: HMPREF1141_2412
symbol: ispF
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP).


ensembl_gene_id: HMPREF1141_2415
symbol: dacA
gene_biotype: protein_coding
description:
  TIGR00159 family protein; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria.


ensembl_gene_id: HMPREF1141_2422
symbol: sdaAB_2
gene_biotype: protein_coding
description:
  L-serine dehydratase, iron-sulfur-dependent, beta subunit; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; Belongs to the iron-sulfur dependent L-serine dehydratase family.


ensembl_gene_id: HMPREF1141_2424
symbol: EJF42064.1
gene_biotype: protein_coding
description:
  Transposase, IS200 family; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.


ensembl_gene_id: HMPREF1141_2431
symbol: proC
gene_biotype: protein_coding
description:
  Putative pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.


ensembl_gene_id: HMPREF1141_2443
symbol: nth
gene_biotype: protein_coding
description:
  Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.


ensembl_gene_id: HMPREF1141_2449
symbol: tmcAL
gene_biotype: protein_coding
description:
  HIGH nucleotidyl transferase; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of elongator tRNA(Met), using acetate and ATP as substrates. First activates an acetate ion to form acetyladenylate (Ac- AMP) and then transfers the acetyl group to tRNA to form ac(4)C34.


ensembl_gene_id: HMPREF1141_2450
symbol: ackA
gene_biotype: protein_coding
description:
  Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.


ensembl_gene_id: HMPREF1141_2455
symbol: EJF40803.1
gene_biotype: protein_coding
description:
  AP endonuclease, family 2; This gene contains a nucleotide ambiguity which may be the result of a sequencing error.


ensembl_gene_id: HMPREF1141_2463
symbol: kduI
gene_biotype: protein_coding
description:
  KduI/IolB family protein; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family.


ensembl_gene_id: HMPREF1141_2471
symbol: secD
gene_biotype: protein_coding
description:
  Export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: HMPREF1141_2472
symbol: secF
gene_biotype: protein_coding
description:
  Export membrane protein SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: HMPREF1141_2476
symbol: hprK
gene_biotype: protein_coding
description:
  HPr(Ser) kinase/phosphatase; Catalyzes the ATP- as well as the pyrophosphate-dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK/P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P-Ser-HPr). The two antagonistic activities of HprK/P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable car [...]


ensembl_gene_id: HMPREF1141_2482
symbol: pfkA
gene_biotype: protein_coding
description:
  6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.


ensembl_gene_id: HMPREF1141_2486
symbol: ldh
gene_biotype: protein_coding
description:
  L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family.


ensembl_gene_id: HMPREF1141_2490
symbol: cls
gene_biotype: protein_coding
description:
  Cardiolipin synthetase; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol; Belongs to the phospholipase D family. Cardiolipin synthase subfamily.


ensembl_gene_id: HMPREF1141_2499
symbol: EJF40853.1
gene_biotype: protein_coding
description:
  C-terminal domain of 1-Cys peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.


ensembl_gene_id: HMPREF1141_2509
symbol: cas4
gene_biotype: protein_coding
description:
  CRISPR-associated protein Cas4; CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Belongs to the CRISPR-associated exonuclease Cas4 family.


ensembl_gene_id: HMPREF1141_2510
symbol: cas1
gene_biotype: protein_coding
description:
  CRISPR-associated endonuclease Cas1, subtype I-C/DVULG; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.


ensembl_gene_id: HMPREF1141_2511
symbol: cas2
gene_biotype: protein_coding
description:
  CRISPR-associated endoribonuclease Cas2; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.


ensembl_gene_id: HMPREF1141_2519
symbol: EJF40852.1
gene_biotype: protein_coding
description:
  HAD hydrolase, family IIA; Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro; Belongs to the HAD-like hydrolase superfamily. NagD family.


ensembl_gene_id: HMPREF1141_2542
symbol: EJF39165.1
gene_biotype: protein_coding
description:
  Oxidoreductase, nitrogenase component 1; Overlaps another CDS with the same product name; Belongs to the NifD/NifK/NifE/NifN family.


ensembl_gene_id: HMPREF1141_2550
symbol: nifH
gene_biotype: protein_coding
description:
  Nitrogenase iron protein; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family.


ensembl_gene_id: HMPREF1141_2577
symbol: fhuG
gene_biotype: protein_coding
description:
  Ferrichrome transport system permease protein FhuG; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: HMPREF1141_2578
symbol: fhuB
gene_biotype: protein_coding
description:
  Iron(3+)-hydroxamate import system permease protein FhuB; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: HMPREF1141_2583
symbol: EJF40971.1
gene_biotype: protein_coding
description:
  Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by glimmer; putative.


ensembl_gene_id: HMPREF1141_2588
symbol: tadA
gene_biotype: protein_coding
description:
  Cytidine and deoxycytidylate deaminase zinc-binding region; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: HMPREF1141_2596
symbol: EJF41508.1
gene_biotype: protein_coding
description:
  PF14315 domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.


ensembl_gene_id: HMPREF1141_2597
symbol: rbsA
gene_biotype: protein_coding
description:
  Putative ribose transport, ATP-binding protein RbsA; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.


ensembl_gene_id: HMPREF1141_2619
symbol: trmU
gene_biotype: protein_coding
description:
  tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.


ensembl_gene_id: HMPREF1141_2634
symbol: EJF41513.1
gene_biotype: protein_coding
description:
  RNA methyltransferase, RsmE family; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.


ensembl_gene_id: HMPREF1141_2637
symbol: EJF41512.1
gene_biotype: protein_coding
description:
  Flavodoxin domain protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error.


ensembl_gene_id: HMPREF1141_2642
symbol: atpD
gene_biotype: protein_coding
description:
  V-type ATPase, D subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.


ensembl_gene_id: HMPREF1141_2643
symbol: atpB
gene_biotype: protein_coding
description:
  ATP synthase alpha/beta chain, C-terminal domain protein; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit.


ensembl_gene_id: HMPREF1141_2644
symbol: atpA
gene_biotype: protein_coding
description:
  ATP synthase alpha/beta chain, C-terminal domain protein; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.


ensembl_gene_id: HMPREF1141_2656
symbol: ispE
gene_biotype: protein_coding
description:
  4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.


ensembl_gene_id: HMPREF1141_2662
symbol: infC
gene_biotype: protein_coding
description:
  Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.


ensembl_gene_id: HMPREF1141_2664
symbol: rplT
gene_biotype: protein_coding
description:
  Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.


ensembl_gene_id: HMPREF1141_2667
symbol: topA
gene_biotype: protein_coding
description:
  DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]


ensembl_gene_id: HMPREF1141_2668
symbol: trmFO
gene_biotype: protein_coding
description:
  tRNA:m(5)U-54 methyltransferase; Catalyzes the folate-dependent formation of 5-methyl-uridine at position 54 (M-5-U54) in all tRNAs; Belongs to the MnmG family. TrmFO subfamily.


ensembl_gene_id: HMPREF1141_2669
symbol: plsX
gene_biotype: protein_coding
description:
  Fatty acid/phospholipid synthesis protein PlsX; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.


ensembl_gene_id: HMPREF1141_2670
symbol: rnc
gene_biotype: protein_coding
description:
  Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.


ensembl_gene_id: HMPREF1141_2672
symbol: smc
gene_biotype: protein_coding
description:
  Chromosome segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family.


ensembl_gene_id: HMPREF1141_2673
symbol: ftsY
gene_biotype: protein_coding
description:
  Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC).


ensembl_gene_id: HMPREF1141_2674
symbol: rdgB
gene_biotype: protein_coding
description:
  Non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.


ensembl_gene_id: HMPREF1141_2676
symbol: nadD
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).


ensembl_gene_id: HMPREF1141_2678
symbol: rsfS
gene_biotype: protein_coding
description:
  Iojap-like protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.


ensembl_gene_id: HMPREF1141_2684
symbol: brnQ
gene_biotype: protein_coding
description:
  Branched-chain amino acid transport system II carrier protein; Component of the transport system for branched-chain amino acids.


ensembl_gene_id: HMPREF1141_2691
symbol: queH
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr).


ensembl_gene_id: HMPREF1141_2704
symbol: cax
gene_biotype: protein_coding
description:
  Calcium/proton exchanger; Ca(+)/H(+) antiporter that extrudes calcium in exchange for external protons.


ensembl_gene_id: HMPREF1141_2796
symbol: fla
gene_biotype: protein_coding
description:
  Flagellin protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.


ensembl_gene_id: HMPREF1141_2797
symbol: csrA
gene_biotype: protein_coding
description:
  Carbon storage regulator; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW.


ensembl_gene_id: HMPREF1141_2798
symbol: fliW
gene_biotype: protein_coding
description:
  Protein FliW; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum.


ensembl_gene_id: HMPREF1141_2803
symbol: flgB
gene_biotype: protein_coding
description:
  Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.


ensembl_gene_id: HMPREF1141_2806
symbol: fliF
gene_biotype: protein_coding
description:
  Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.


ensembl_gene_id: HMPREF1141_2812
symbol: flgD
gene_biotype: protein_coding
description:
  Flagellar hook capping protein N-terminal domain protein; Required for flagellar hook formation. May act as a scaffolding protein.


ensembl_gene_id: HMPREF1141_2820
symbol: fliP
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.


ensembl_gene_id: HMPREF1141_2821
symbol: fliQ
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.


ensembl_gene_id: HMPREF1141_2823
symbol: flhB
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family.


ensembl_gene_id: HMPREF1141_2824
symbol: flhA
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.


ensembl_gene_id: HMPREF1141_2830
symbol: cheD
gene_biotype: protein_coding
description:
  CheD chemotactic sensory transduction; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.


ensembl_gene_id: HMPREF1141_2831
symbol: rpsR
gene_biotype: protein_coding
description:
  Ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.


ensembl_gene_id: HMPREF1141_2832
symbol: ssb
gene_biotype: protein_coding
description:
  Single-stranded DNA-binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.


ensembl_gene_id: HMPREF1141_2836
symbol: prfB
gene_biotype: protein_coding
description:
  Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.


ensembl_gene_id: HMPREF1141_2860
symbol: upp
gene_biotype: protein_coding
description:
  Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.


ensembl_gene_id: HMPREF1141_2861
symbol: EJF40153.1
gene_biotype: protein_coding
description:
  DNA-binding helix-turn-helix protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.


ensembl_gene_id: HMPREF1141_2888
symbol: EJF40073.1
gene_biotype: protein_coding
description:
  Propanediol utilization protein PduL; Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate.


ensembl_gene_id: HMPREF1141_2895
symbol: EJF39783.1
gene_biotype: protein_coding
description:
  Ribosomal protein L25, Ctc-form; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.


ensembl_gene_id: HMPREF1141_2896
symbol: dinB
gene_biotype: protein_coding
description:
  Putative DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.


ensembl_gene_id: HMPREF1141_2911
symbol: fabZ
gene_biotype: protein_coding
description:
  Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.


ensembl_gene_id: HMPREF1141_2912
symbol: fabF
gene_biotype: protein_coding
description:
  Beta-ketoacyl-acyl-carrier-protein synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.


ensembl_gene_id: HMPREF1141_2913
symbol: fabG
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: HMPREF1141_2917
symbol: fabH
gene_biotype: protein_coding
description:
  Beta-ketoacyl-acyl-carrier-protein synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.


ensembl_gene_id: HMPREF1141_2918
symbol: accA
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.


ensembl_gene_id: HMPREF1141_2919
symbol: accD
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase, carboxyl transferase, beta subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.


ensembl_gene_id: HMPREF1141_2920
symbol: acpP-2
gene_biotype: protein_coding
description:
  Putative acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.


ensembl_gene_id: HMPREF1141_2923
symbol: hemC
gene_biotype: protein_coding
description:
  Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps.


ensembl_gene_id: HMPREF1141_2924
symbol: EJF40177.1
gene_biotype: protein_coding
description:
  Putative glutamate-1-semialdehyde-2,1-aminomutase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: HMPREF1141_2925
symbol: ahpC
gene_biotype: protein_coding
description:
  Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.


ensembl_gene_id: HMPREF1141_2928
symbol: bioB
gene_biotype: protein_coding
description:
  Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.


ensembl_gene_id: HMPREF1141_2936
symbol: uppP-2
gene_biotype: protein_coding
description:
  Putative undecaprenyl-diphosphatase UppP; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.


ensembl_gene_id: HMPREF1141_2965
symbol: gltX
gene_biotype: protein_coding
description:
  glutamate--tRNA ligase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu).


ensembl_gene_id: HMPREF1141_2969
symbol: sbcD
gene_biotype: protein_coding
description:
  Exonuclease SbcCD, D subunit; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family.


ensembl_gene_id: HMPREF1141_2971
symbol: mntP
gene_biotype: protein_coding
description:
  PF02659 domain protein; Probably functions as a manganese efflux pump. Belongs to the MntP (TC 9.B.29) family.


ensembl_gene_id: HMPREF1141_2973
symbol: hisH
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.


ensembl_gene_id: HMPREF1141_2974
symbol: hisF
gene_biotype: protein_coding
description:
  Imidazoleglycerol phosphate synthase, cyclase subunit; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.


ensembl_gene_id: HMPREF1141_2980
symbol: engA
gene_biotype: protein_coding
description:
  Ribosome-associated GTPase EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.


ensembl_gene_id: HMPREF1141_2981
symbol: plsY
gene_biotype: protein_coding
description:
  Acyl-phosphate glycerol 3-phosphate acyltransferase; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.


ensembl_gene_id: HMPREF1141_2985
symbol: EJF39994.1
gene_biotype: protein_coding
description:
  ScpA/B-like protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: HMPREF1141_2986
symbol: scpB
gene_biotype: protein_coding
description:
  Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: HMPREF1141_2997
symbol: EJF40033.1
gene_biotype: protein_coding
description:
  RNA polymerase Rpb6; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.


ensembl_gene_id: HMPREF1141_2998
symbol: priA
gene_biotype: protein_coding
description:
  Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.


ensembl_gene_id: HMPREF1141_2999
symbol: def
gene_biotype: protein_coding
description:
  Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.


ensembl_gene_id: HMPREF1141_3000
symbol: fmt
gene_biotype: protein_coding
description:
  methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.


ensembl_gene_id: HMPREF1141_3002
symbol: sun
gene_biotype: protein_coding
description:
  Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.


ensembl_gene_id: HMPREF1141_3003
symbol: rlmN
gene_biotype: protein_coding
description:
  23S rRNA m2A2503 methyltransferase; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family.


ensembl_gene_id: HMPREF1141_3017
symbol: spoIVA
gene_biotype: protein_coding
description:
  Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.


ensembl_gene_id: HMPREF1141_3029
symbol: lgt
gene_biotype: protein_coding
description:
  Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.


ensembl_gene_id: HMPREF1141_3031
symbol: dxs
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.


ensembl_gene_id: HMPREF1141_3033
symbol: nadK
gene_biotype: protein_coding
description:
  NAD(+)/NADH kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.


ensembl_gene_id: HMPREF1141_3037
symbol: tyrS
gene_biotype: protein_coding
description:
  tyrosine--tRNA ligase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily.


ensembl_gene_id: HMPREF1141_3041
symbol: dapB
gene_biotype: protein_coding
description:
  Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.


ensembl_gene_id: HMPREF1141_3045
symbol: queA
gene_biotype: protein_coding
description:
  S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).


ensembl_gene_id: HMPREF1141_3046
symbol: tgt
gene_biotype: protein_coding
description:
  tRNA-guanine transglycosylase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the [...]


ensembl_gene_id: HMPREF1141_3051
symbol: proC_1
gene_biotype: protein_coding
description:
  Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.


ensembl_gene_id: HMPREF1141_3053
symbol: xerD
gene_biotype: protein_coding
description:
  Tyrosine recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.


ensembl_gene_id: HMPREF1141_3061
symbol: EJF40137.1
gene_biotype: protein_coding
description:
  Efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: HMPREF1141_3063
symbol: radA
gene_biotype: protein_coding
description:
  DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.


ensembl_gene_id: HMPREF1141_3071
symbol: hslO
gene_biotype: protein_coding
description:
  Chaperonin HslO; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress.


ensembl_gene_id: HMPREF1141_3074
symbol: lysA
gene_biotype: protein_coding
description:
  Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.


ensembl_gene_id: HMPREF1141_3075
symbol: ysxC
gene_biotype: protein_coding
description:
  Ribosome biogenesis GTP-binding protein YsxC; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.


ensembl_gene_id: HMPREF1141_3076
symbol: lon
gene_biotype: protein_coding
description:
  Endopeptidase La; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.


ensembl_gene_id: HMPREF1141_3077
symbol: clpX
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease, ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.


ensembl_gene_id: HMPREF1141_3078
symbol: clpP_2
gene_biotype: protein_coding
description:
  ATP-dependent Clp endopeptidase, proteolytic subunit ClpP; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: HMPREF1141_3079
symbol: tig
gene_biotype: protein_coding
description:
  Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.


ensembl_gene_id: HMPREF1141_3085
symbol: ylqF
gene_biotype: protein_coding
description:
  Ribosome biogenesis GTP-binding protein YlqF; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.


ensembl_gene_id: HMPREF1141_3087
symbol: rplS
gene_biotype: protein_coding
description:
  Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.


ensembl_gene_id: HMPREF1141_3088
symbol: rlmH
gene_biotype: protein_coding
description:
  rRNA large subunit m3Psi methyltransferase RlmH; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.


ensembl_gene_id: HMPREF1141_3096
symbol: EJF40171.1
gene_biotype: protein_coding
description:
  ABC transporter, permease protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.


ensembl_gene_id: HMPREF1141_3103
symbol: mrnC
gene_biotype: protein_coding
description:
  Ribonuclease III domain protein; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family.


ensembl_gene_id: HMPREF1141_3104
symbol: obg
gene_biotype: protein_coding
description:
  Obg family GTPase CgtA; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.


ensembl_gene_id: HMPREF1141_3107
symbol: rplU
gene_biotype: protein_coding
description:
  Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.


ensembl_gene_id: HMPREF1141_3111
symbol: xseB
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII, small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.


ensembl_gene_id: HMPREF1141_3112
symbol: xseA
gene_biotype: protein_coding
description:
  Putative exodeoxyribonuclease VII, large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.


ensembl_gene_id: HMPREF1141_3114
symbol: nusB
gene_biotype: protein_coding
description:
  Transcription antitermination factor NusB; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.


ensembl_gene_id: HMPREF1141_3124
symbol: ligA
gene_biotype: protein_coding
description:
  DNA ligase (NAD+); DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA.


ensembl_gene_id: HMPREF1141_3126
symbol: ispH
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.


ensembl_gene_id: HMPREF1141_3138
symbol: uvrA
gene_biotype: protein_coding
description:
  Excinuclease ABC, A subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.


ensembl_gene_id: HMPREF1141_3139
symbol: uvrB
gene_biotype: protein_coding
description:
  Excinuclease ABC, B subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...]


ensembl_gene_id: HMPREF1141_3143
symbol: pyrE
gene_biotype: protein_coding
description:
  Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).


ensembl_gene_id: HMPREF1141_3169
symbol: EJF39364.1
gene_biotype: protein_coding
description:
  RNA methyltransferase, TrmH family, group 3; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: HMPREF1141_3175
symbol: leuD
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydratase, small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 2 subfamily.


ensembl_gene_id: HMPREF1141_3176
symbol: leuC
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydratase, large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.


ensembl_gene_id: HMPREF1141_3184
symbol: secA
gene_biotype: protein_coding
description:
  Preprotein translocase, SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family.


ensembl_gene_id: HMPREF1141_3188
symbol: dnaJ
gene_biotype: protein_coding
description:
  Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...]


ensembl_gene_id: HMPREF1141_3190
symbol: grpE
gene_biotype: protein_coding
description:
  Co-chaperone GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-depend [...]


ensembl_gene_id: HMPREF1141_3191
symbol: hrcA
gene_biotype: protein_coding
description:
  Heat-inducible transcription repressor HrcA; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons.


ensembl_gene_id: HMPREF1141_3214
symbol: EJF39067.1
gene_biotype: protein_coding
description:
  Response regulator receiver domain protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error.


ensembl_gene_id: HMPREF1141_3228
symbol: lepA
gene_biotype: protein_coding
description:
  GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.


ensembl_gene_id: HMPREF1141_3229
symbol: EJF39035.1
gene_biotype: protein_coding
description:
  Putative coproporphyrinogen dehydrogenase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: HMPREF1141_3236
symbol: feoB_2
gene_biotype: protein_coding
description:
  Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.


ensembl_gene_id: HMPREF1141_3238
symbol: EJF39037.1
gene_biotype: protein_coding
description:
  FeoA domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.


ensembl_gene_id: HMPREF1141_3267
symbol: EJF39072.1
gene_biotype: protein_coding
description:
  Putative sodium/glutamate symporter; Catalyzes the sodium-dependent transport of glutamate. Belongs to the glutamate:Na(+) symporter (ESS) (TC 2.A.27) family.


ensembl_gene_id: HMPREF1141_3277
symbol: leuB
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.


ensembl_gene_id: HMPREF1141_3278
symbol: leuA
gene_biotype: protein_coding
description:
  2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 2 subfamily.


ensembl_gene_id: HMPREF1141_3289
symbol: glgC
gene_biotype: protein_coding
description:
  Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.


ensembl_gene_id: HMPREF1141_3290
symbol: glgB
gene_biotype: protein_coding
description:
  1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.


ensembl_gene_id: HMPREF1141_3292
symbol: EJF41052.1
gene_biotype: protein_coding
description:
  Transposase; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.


ensembl_gene_id: HMPREF1141_3301
symbol: gap
gene_biotype: protein_coding
description:
  Glyceraldehyde-3-phosphate dehydrogenase, type I; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: HMPREF1141_3307
symbol: trmL
gene_biotype: protein_coding
description:
  tRNA (cytidine(34)-2'-O)-methyltransferase; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.


ensembl_gene_id: HMPREF1141_3309
symbol: tpiA
gene_biotype: protein_coding
description:
  Triose-phosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.


ensembl_gene_id: HMPREF1141_3310
symbol: gpmI
gene_biotype: protein_coding
description:
  2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.


ensembl_gene_id: HMPREF1141_3313
symbol: EJF41038.1
gene_biotype: protein_coding
description:
  Transposase, IS4-like family protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.


ensembl_gene_id: HMPREF1141_3317
symbol: rfbB
gene_biotype: protein_coding
description:
  dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.


ensembl_gene_id: HMPREF1141_3322
symbol: rfbA
gene_biotype: protein_coding
description:
  Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.


ensembl_gene_id: HMPREF1141_3330
symbol: EJF41004.1
gene_biotype: protein_coding
description:
  Recombinase zinc beta ribbon domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop.


ensembl_gene_id: HMPREF1141_3332
symbol: EJF38299.1
gene_biotype: protein_coding
description:
  ACT domain protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error.


ensembl_gene_id: HMPREF1141_3342
symbol: EJF38248.1
gene_biotype: protein_coding
description:
  PF12821 family protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.


ensembl_gene_id: HMPREF1141_3349
symbol: EJF38176.1
gene_biotype: protein_coding
description:
  Thiamine pyrophosphate enzyme, N-terminal TPP binding domain protein; Belongs to the TPP enzyme family.


ensembl_gene_id: HMPREF1141_3351
symbol: EJF38217.1
gene_biotype: protein_coding
description:
  Putative HTH-type transcriptional regulator GltC; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: HMPREF1141_3357
symbol: aroD
gene_biotype: protein_coding
description:
  3-dehydroquinate dehydratase, type I; Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis- dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3-dehydroshikimate. Belongs to the type-I 3-dehydroquinase family.


ensembl_gene_id: HMPREF1141_3382
symbol: msrA
gene_biotype: protein_coding
description:
  Peptide methionine sulfoxide reductase MsrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.


ensembl_gene_id: HMPREF1141_3388
symbol: EJF38213.1
gene_biotype: protein_coding
description:
  CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: HMPREF1141_3399
symbol: pheS
gene_biotype: protein_coding
description:
  phenylalanine--tRNA ligase, alpha subunit; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.


ensembl_gene_id: HMPREF1141_3400
symbol: pheT
gene_biotype: protein_coding
description:
  phenylalanine--tRNA ligase, beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.


ensembl_gene_id: HMPREF1141_3415
symbol: EJF38269.1
gene_biotype: protein_coding
description:
  SAF domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.


ensembl_gene_id: HMPREF1141_3446
symbol: cysN
gene_biotype: protein_coding
description:
  Sulfate adenylyltransferase, large subunit; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.


ensembl_gene_id: HMPREF1141_3456
symbol: EJF38229.1
gene_biotype: protein_coding
description:
  Putative sulfate/thiosulfate ABC transporter, ATP-binding protein CysA; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Sulfate/tungstate importer (TC 3.A.1.6) family.


ensembl_gene_id: HMPREF1141_3458
symbol: cysT
gene_biotype: protein_coding
description:
  Sulfate ABC transporter, permease protein CysT; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import.


ensembl_gene_id: HMPREF1141_3492
symbol: greA
gene_biotype: protein_coding
description:
  Transcription elongation factor GreA/GreB, N-terminal domain protein; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.


ensembl_gene_id: HMPREF1141_3495
symbol: EJF41970.1
gene_biotype: protein_coding
description:
  Efflux ABC transporter, permease protein; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.


ensembl_gene_id: HMPREF1141_3496
symbol: ftsE
gene_biotype: protein_coding
description:
  Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.


ensembl_gene_id: HMPREF1141_3516
symbol: EJF41952.1
gene_biotype: protein_coding
description:
  Putative CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: HMPREF1141_3519
symbol: truA
gene_biotype: protein_coding
description:
  tRNA pseudouridine(38-40) synthase; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.


ensembl_gene_id: HMPREF1141_3521
symbol: ecfA
gene_biotype: protein_coding
description:
  ABC transporter, ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.


ensembl_gene_id: HMPREF1141_3522
symbol: ecfA-2
gene_biotype: protein_coding
description:
  Cobalt ABC transporter, ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.


ensembl_gene_id: HMPREF1141_3524
symbol: glmM
gene_biotype: protein_coding
description:
  Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.


ensembl_gene_id: HMPREF1141_3525
symbol: ruvB
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.


ensembl_gene_id: HMPREF1141_3526
symbol: ruvA
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.


ensembl_gene_id: HMPREF1141_3527
symbol: ruvC
gene_biotype: protein_coding
description:
  Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.


ensembl_gene_id: HMPREF1141_3531
symbol: argF
gene_biotype: protein_coding
description:
  Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.


ensembl_gene_id: HMPREF1141_3532
symbol: argD
gene_biotype: protein_coding
description:
  Transaminase, acetylornithine/succinylornithine family; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.


ensembl_gene_id: HMPREF1141_3533
symbol: argB
gene_biotype: protein_coding
description:
  Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.


ensembl_gene_id: HMPREF1141_3534
symbol: argJ
gene_biotype: protein_coding
description:
  Glutamate N-acetyltransferase/amino-acid acetyltransferase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family.


ensembl_gene_id: HMPREF1141_3535
symbol: argC
gene_biotype: protein_coding
description:
  N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.


ensembl_gene_id: HMPREF1141_3568
symbol: EJF41949.1
gene_biotype: protein_coding
description:
  Putative aldehyde-alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.


# pathwayInfo

id: CL:1031
description: Imidazoleglycerol-phosphate synthase activity, and Histidinol dehydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1031_Imidazoleglycerol-phosphate_synthase_activity,_and_Histidinol_dehydrogenase


id: CL:1058
description: Mixed, incl. Lysine metabolic process, and Glutamine family amino acid biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1058_Mixed,_incl._Lysine_metabolic_process,_and_Glutamine_family_amino_acid_biosynthetic_process


id: CL:1059
description: Mixed, incl. Lysine metabolic process, and Arginine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1059_Mixed,_incl._Lysine_metabolic_process,_and_Arginine_metabolic_process


id: CL:1061
description: Mixed, incl. Lysine metabolic process, and Arginine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1061_Mixed,_incl._Lysine_metabolic_process,_and_Arginine_metabolic_process


id: CL:1062
description: Arginine metabolic process, and Polyamine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1062_Arginine_metabolic_process,_and_Polyamine_metabolic_process


id: CL:1081
description: Polyamine metabolic process, and Ureohydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1081_Polyamine_metabolic_process,_and_Ureohydrolase


id: CL:1096
description: Lysine biosynthesis, and L,L-diaminopimelate aminotransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1096_Lysine_biosynthesis,_and_L,L-diaminopimelate_aminotransferase_activity


id: CL:1133
description: Mixed, incl. Cysteine and methionine metabolism, and NlpA lipoprotein
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1133_Mixed,_incl._Cysteine_and_methionine_metabolism,_and_NlpA_lipoprotein


id: CL:1135
description: Mixed, incl. Sulfur amino acid metabolic process, and Ammonia-lyase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1135_Mixed,_incl._Sulfur_amino_acid_metabolic_process,_and_Ammonia-lyase_activity


id: CL:1137
description: Sulfur amino acid metabolic process, and Pantothenate catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1137_Sulfur_amino_acid_metabolic_process,_and_Pantothenate_catabolic_process


id: CL:1138
description: Sulfur amino acid metabolic process, and S-adenosylmethionine synthetase
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1138_Sulfur_amino_acid_metabolic_process,_and_S-adenosylmethionine_synthetase


id: CL:1139
description: Sulfur amino acid metabolic process, and S-adenosylmethionine synthetase
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1139_Sulfur_amino_acid_metabolic_process,_and_S-adenosylmethionine_synthetase


id: CL:1141
description: Sulfur amino acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1141_Sulfur_amino_acid_metabolic_process


id: CL:1144
description: Transsulfuration, and Quorum sensing
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1144_Transsulfuration,_and_Quorum_sensing


id: CL:1160
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1160_S-adenosylmethionine_synthetase,_and_Cobalamin-independent_methionine_synthase_MetE,_C-terminal/archaeal

description:
  S-adenosylmethionine synthetase, and Cobalamin-independent methionine synthase MetE, C-terminal/archaeal


id: CL:1198
description: Pantothenate catabolic process, and Cysteine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1198_Pantothenate_catabolic_process,_and_Cysteine_biosynthesis


id: CL:121
description: Mixed, incl. Oxidoreductase activity, and Fatty acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:121_Mixed,_incl._Oxidoreductase_activity,_and_Fatty_acid_metabolic_process


id: CL:1216
description: Ammonia-lyase activity, and Drug resistance transporter EmrB-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1216_Ammonia-lyase_activity,_and_Drug_resistance_transporter_EmrB-like


id: CL:1218
description: L-serine ammonia-lyase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1218_L-serine_ammonia-lyase_activity


id: CL:122
description: Mixed, incl. Oxidoreductase activity, and Fatty acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:122_Mixed,_incl._Oxidoreductase_activity,_and_Fatty_acid_metabolic_process


id: CL:123
description: Fatty acid metabolic process, and Oxidoreductase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:123_Fatty_acid_metabolic_process,_and_Oxidoreductase_activity


id: CL:124
description: Mixed, incl. Fatty acid metabolic process, and Pyruvate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:124_Mixed,_incl._Fatty_acid_metabolic_process,_and_Pyruvate_metabolism


id: CL:1242
description: NlpA lipoprotein, and Methionine transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1242_NlpA_lipoprotein,_and_Methionine_transport


id: CL:125
description: Mixed, incl. Fatty acid metabolic process, and Electron transfer flavoprotein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:125_Mixed,_incl._Fatty_acid_metabolic_process,_and_Electron_transfer_flavoprotein_domain


id: CL:126
description: Butanoate metabolism, and Electron transfer flavoprotein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:126_Butanoate_metabolism,_and_Electron_transfer_flavoprotein_domain


id: CL:1273
description: Mixed, incl. Translation, and Protein folding
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1273_Mixed,_incl._Translation,_and_Protein_folding


id: CL:1274
description: Translation, and Protein export
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1274_Translation,_and_Protein_export


id: CL:1276
description: Translation, and Protein export
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1276_Translation,_and_Protein_export


id: CL:1277
description: Mixed, incl. Ribosome, and Regulation of translation
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1277_Mixed,_incl._Ribosome,_and_Regulation_of_translation


id: CL:1278
description: Ribosome, and Regulation of translation
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1278_Ribosome,_and_Regulation_of_translation


id: CL:128
description: Mixed, incl. Butyrate metabolic process, and Electron transfer flavoprotein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:128_Mixed,_incl._Butyrate_metabolic_process,_and_Electron_transfer_flavoprotein_domain


id: CL:1282
description: Ribosome, and Regulation of translation
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1282_Ribosome,_and_Regulation_of_translation


id: CL:1284
description: Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1284_Ribosome,_and_Translation_regulator_activity


id: CL:1287
description: Ribosome, and Translational elongation
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1287_Ribosome,_and_Translational_elongation


id: CL:129
description: Butyrate metabolic process, and Electron transfer flavoprotein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:129_Butyrate_metabolic_process,_and_Electron_transfer_flavoprotein_domain


id: CL:1291
description: Structural constituent of ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1291_Structural_constituent_of_ribosome,_and_Translation_regulator_activity


id: CL:1294
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1294_Structural_constituent_of_ribosome


id: CL:1296
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1296_Structural_constituent_of_ribosome


id: CL:1299
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1299_Structural_constituent_of_ribosome


id: CL:1300
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1300_Structural_constituent_of_ribosome


id: CL:1304
description: rRNA-binding, and Protein transport by the Sec complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1304_rRNA-binding,_and_Protein_transport_by_the_Sec_complex


id: CL:1307
description: Large ribosomal subunit, and rRNA-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1307_Large_ribosomal_subunit,_and_rRNA-binding


id: CL:1309
description: Mixed, incl. Large ribosomal subunit, and Initiation factor
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1309_Mixed,_incl._Large_ribosomal_subunit,_and_Initiation_factor


id: CL:131
description: Butyrate metabolic process, and Electron transfer flavoprotein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:131_Butyrate_metabolic_process,_and_Electron_transfer_flavoprotein_domain


id: CL:132
description: Butyrate metabolic process, and Electron transfer flavoprotein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:132_Butyrate_metabolic_process,_and_Electron_transfer_flavoprotein_domain


id: CL:1344
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1344_Structural_constituent_of_ribosome


id: CL:1345
description: Mixed, incl. Small ribosomal subunit, and K Homology domain, type 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1345_Mixed,_incl._Small_ribosomal_subunit,_and_K_Homology_domain,_type_2


id: CL:1360
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1360_Structural_constituent_of_ribosome


id: CL:1377
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1377_Structural_constituent_of_ribosome


id: CL:1381
description: Mixed, incl. Ribosomal large subunit assembly, and Translation protein SH3-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1381_Mixed,_incl._Ribosomal_large_subunit_assembly,_and_Translation_protein_SH3-like_domain_superfamily


id: CL:1419
description: RNA polymerase, and Transcription termination
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1419_RNA_polymerase,_and_Transcription_termination


id: CL:1448
description: Mixed, incl. Glyoxalase-like domain, and Ribonuclease III domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1448_Mixed,_incl._Glyoxalase-like_domain,_and_Ribonuclease_III_domain


id: CL:1478
description: Mixed, incl. Ribosomal small subunit biogenesis, and Outer membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1478_Mixed,_incl._Ribosomal_small_subunit_biogenesis,_and_Outer_membrane


id: CL:1480
description: Mixed, incl. tRNA pseudouridine synthesis, and Ribosomal small subunit binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1480_Mixed,_incl._tRNA_pseudouridine_synthesis,_and_Ribosomal_small_subunit_binding


id: CL:1494
description: Mixed, incl. Outer membrane, and Prenyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1494_Mixed,_incl._Outer_membrane,_and_Prenyltransferase_activity


id: CL:1505
description: Mixed, incl. Ribosome assembly, and Peptidyl-proline modification
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1505_Mixed,_incl._Ribosome_assembly,_and_Peptidyl-proline_modification


id: CL:1506
description: Mixed, incl. Ribosome assembly, and Pseudouridine synthase, RluA-like, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1506_Mixed,_incl._Ribosome_assembly,_and_Pseudouridine_synthase,_RluA-like,_conserved_site


id: CL:1508
description: Negative regulation of translation, and GTP binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1508_Negative_regulation_of_translation,_and_GTP_binding_domain


id: CL:1525
description: Mixed, incl. Peptidyl-proline modification, and Superoxide dismutase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1525_Mixed,_incl._Peptidyl-proline_modification,_and_Superoxide_dismutase_activity


id: CL:1544
description: Aminoacyl-tRNA synthetase, class Ia, anticodon-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1544_Aminoacyl-tRNA_synthetase,_class_Ia,_anticodon-binding


id: CL:156
description: Butyrate metabolic process, and Rubredoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:156_Butyrate_metabolic_process,_and_Rubredoxin


id: CL:1568
description: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity, and GAD domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1568_glutaminyl-tRNA_synthase_(glutamine-hydrolyzing)_activity,_and_GAD_domain


id: CL:159
description: NAD+ binding, and Thiolase, active site
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:159_NAD+_binding,_and_Thiolase,_active_site


id: CL:1593
description: Mixed, incl. Chaperone, and Thioredoxin-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1593_Mixed,_incl._Chaperone,_and_Thioredoxin-like_superfamily


id: CL:1595
description: Chaperone, and Thioredoxin-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1595_Chaperone,_and_Thioredoxin-like_superfamily


id: CL:1596
description: Chaperone, and ATP-dependent peptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1596_Chaperone,_and_ATP-dependent_peptidase_activity


id: CL:1600
description: Stress response, and Protein folding chaperone
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1600_Stress_response,_and_Protein_folding_chaperone


id: CL:1628
description: Thioredoxin, conserved site, and Pyridine nucleotide-disulphide oxidoreductase
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1628_Thioredoxin,_conserved_site,_and_Pyridine_nucleotide-disulphide_oxidoreductase


id: CL:1654
description: Mixed, incl. ParB/Spo0J, HTH domain, and K homology domain-like, alpha/beta
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1654_Mixed,_incl._ParB/Spo0J,_HTH_domain,_and_K_homology_domain-like,_alpha/beta


id: CL:1656
description: Mixed, incl. ParB/Spo0J, HTH domain, and MnmG, N-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1656_Mixed,_incl._ParB/Spo0J,_HTH_domain,_and_MnmG,_N-terminal_domain


id: CL:1675
description: Mixed, incl. Ribosome biogenesis, and Protein kinase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1675_Mixed,_incl._Ribosome_biogenesis,_and_Protein_kinase_domain


id: CL:1677
description: Mixed, incl. RsgA GTPase domain, and Protein kinase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1677_Mixed,_incl._RsgA_GTPase_domain,_and_Protein_kinase_domain


id: CL:1680
description: rRNA methyltransferase activity, and Formyl transferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1680_rRNA_methyltransferase_activity,_and_Formyl_transferase


id: CL:1695
description: RsgA GTPase domain, and Protein kinase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1695_RsgA_GTPase_domain,_and_Protein_kinase_domain


id: CL:1708
description: Mixed, incl. Chromosome partition, and Sister chromatid cohesion
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1708_Mixed,_incl._Chromosome_partition,_and_Sister_chromatid_cohesion


id: CL:1724
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1724_Mostly_uncharacterized,_incl._Peptidyl-glutamine_methylation,_and_CDP-diacylglycerol--glycerol-3-phosphate_3-phosphatidyltransferase

description:
  Mostly uncharacterized, incl. Peptidyl-glutamine methylation, and CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase


id: CL:1726
description: Mostly uncharacterized, incl. Protein ubiquitination, and Adaptive Immune System
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1726_Mostly_uncharacterized,_incl._Protein_ubiquitination,_and_Adaptive_Immune_System


id: CL:1727
description: Mixed, incl. Adaptive Immune System, and Hexose catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1727_Mixed,_incl._Adaptive_Immune_System,_and_Hexose_catabolic_process


id: CL:1740
description: Mixed, incl. Protein ubiquitination, and Phosphodiester glycosidase
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1740_Mixed,_incl._Protein_ubiquitination,_and_Phosphodiester_glycosidase


id: CL:1756
description: Mixed, incl. Peptidyl-glutamine methylation, and Peptide chain release factor
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1756_Mixed,_incl._Peptidyl-glutamine_methylation,_and_Peptide_chain_release_factor


id: CL:1773
description: Mixed, incl. Porphyrin-containing compound metabolic process, and Ribosome biogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1773_Mixed,_incl._Porphyrin-containing_compound_metabolic_process,_and_Ribosome_biogenesis


id: CL:1774
description: Mixed, incl. Ribosome biogenesis, and AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1774_Mixed,_incl._Ribosome_biogenesis,_and_AAA_domain


id: CL:1776
description: Mixed, incl. AAA domain, and K Homology domain, type 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1776_Mixed,_incl._AAA_domain,_and_K_Homology_domain,_type_2


id: CL:179
description: Electron transfer flavoprotein domain, and acyl-CoA dehydrogenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:179_Electron_transfer_flavoprotein_domain,_and_acyl-CoA_dehydrogenase_activity


id: CL:1797
description: Mixed, incl. Anaerobic coproporphyrinogen-III oxidase, and HIT domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1797_Mixed,_incl._Anaerobic_coproporphyrinogen-III_oxidase,_and_HIT_domain


id: CL:1812
description: Mixed, incl. RNA methylation, and Rubrerythrin
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1812_Mixed,_incl._RNA_methylation,_and_Rubrerythrin


id: CL:1813
description: Mixed, incl. Rubrerythrin, and GIY-YIG endonuclease
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1813_Mixed,_incl._Rubrerythrin,_and_GIY-YIG_endonuclease


id: CL:1824
description: Methyltransferase complex, and Dihydrouridine synthase (Dus)
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1824_Methyltransferase_complex,_and_Dihydrouridine_synthase_(Dus)


id: CL:1833
description: Mixed, incl. DNA repair, and DNA conformation change
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1833_Mixed,_incl._DNA_repair,_and_DNA_conformation_change


id: CL:1835
description: Mixed, incl. DNA repair, and DNA replication
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1835_Mixed,_incl._DNA_repair,_and_DNA_replication


id: CL:1836
description: Mixed, incl. DNA repair, and DNA replication
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1836_Mixed,_incl._DNA_repair,_and_DNA_replication


id: CL:1838
description: DNA repair, and Mismatch repair
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1838_DNA_repair,_and_Mismatch_repair


id: CL:1839
description: DNA repair, and Mismatch repair
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1839_DNA_repair,_and_Mismatch_repair


id: CL:1841
description: DNA repair, and DNA replication
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1841_DNA_repair,_and_DNA_replication


id: CL:1842
description: Mixed, incl. DNA replication, and DNA repair complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1842_Mixed,_incl._DNA_replication,_and_DNA_repair_complex


id: CL:1844
description: DNA damage sensor activity, and DNA-directed DNA polymerase
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1844_DNA_damage_sensor_activity,_and_DNA-directed_DNA_polymerase


id: CL:1846
description: Mismatched DNA binding, and DNA-directed DNA polymerase
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1846_Mismatched_DNA_binding,_and_DNA-directed_DNA_polymerase


id: CL:1872
description: DNA replication, and DNA topoisomerase, type IA
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1872_DNA_replication,_and_DNA_topoisomerase,_type_IA


id: CL:1895
description: Mixed, incl. Holliday junction helicase complex, and Regulation of response to stress
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1895_Mixed,_incl._Holliday_junction_helicase_complex,_and_Regulation_of_response_to_stress


id: CL:192
description: Aldehyde dehydrogenase domain, and Taurine and hypotaurine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:192_Aldehyde_dehydrogenase_domain,_and_Taurine_and_hypotaurine_metabolism


id: CL:1930
description: Mixed, incl. Horizontal gene transfer, and tRNA 3-end processing
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1930_Mixed,_incl._Horizontal_gene_transfer,_and_tRNA_3-end_processing


id: CL:1931
description: Mixed, incl. tRNA 3-end processing, and RNA-DNA hybrid ribonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1931_Mixed,_incl._tRNA_3-end_processing,_and_RNA-DNA_hybrid_ribonuclease_activity


id: CL:194
description: Taurine and hypotaurine metabolism, and Butanol dehydrogenase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:194_Taurine_and_hypotaurine_metabolism,_and_Butanol_dehydrogenase-like


id: CL:1942
description: Horizontal gene transfer, and Subunit ChlI of Mg-chelatase
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1942_Horizontal_gene_transfer,_and_Subunit_ChlI_of_Mg-chelatase


id: CL:1951
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1951_Mixed,_incl._DNA_topoisomerase_type_II_(double_strand_cut,_ATP-hydrolyzing)_activity,_and_DNA_replication_initiation

description:
  Mixed, incl. DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity, and DNA replication initiation


id: CL:1954
description: Mixed, incl. DNA topoisomerase, type IIA-like domain superfamily, and DNA replication initiation
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1954_Mixed,_incl._DNA_topoisomerase,_type_IIA-like_domain_superfamily,_and_DNA_replication_initiation


id: CL:1988
description: Mixed, incl. Isoprenoid biosynthetic process, and Pyridine nucleotide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1988_Mixed,_incl._Isoprenoid_biosynthetic_process,_and_Pyridine_nucleotide_biosynthetic_process


id: CL:1989
description: Mixed, incl. Isoprenoid biosynthetic process, and Pyridine nucleotide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1989_Mixed,_incl._Isoprenoid_biosynthetic_process,_and_Pyridine_nucleotide_biosynthetic_process


id: CL:1990
description: Isoprenoid biosynthetic process, and DNA catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1990_Isoprenoid_biosynthetic_process,_and_DNA_catabolic_process


id: CL:1991
description: Isoprenoid biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:1991_Isoprenoid_biosynthetic_process


id: CL:2014
description: DNA catabolic process, and NusB family
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2014_DNA_catabolic_process,_and_NusB_family


id: CL:2023
description: Mixed, incl. Pyridine nucleotide biosynthetic process, and Peptidase M16, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2023_Mixed,_incl._Pyridine_nucleotide_biosynthetic_process,_and_Peptidase_M16,_C-terminal


id: CL:2024
description: Mixed, incl. Peptidase M16, C-terminal, and Amino acid binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2024_Mixed,_incl._Peptidase_M16,_C-terminal,_and_Amino_acid_binding


id: CL:2039
description: Pyridine nucleotide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2039_Pyridine_nucleotide_biosynthetic_process


id: CL:2050
description: Coenzyme A biosynthesis, and Small Multidrug Resistance protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2050_Coenzyme_A_biosynthesis,_and_Small_Multidrug_Resistance_protein


id: CL:2059
description: Mixed, incl. Peptidoglycan biosynthesis, and Cell division
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2059_Mixed,_incl._Peptidoglycan_biosynthesis,_and_Cell_division


id: CL:2060
description: Peptidoglycan biosynthesis, and Cell division
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2060_Peptidoglycan_biosynthesis,_and_Cell_division


id: CL:2061
description: Mixed, incl. Peptidoglycan biosynthesis, and Cell division site
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2061_Mixed,_incl._Peptidoglycan_biosynthesis,_and_Cell_division_site


id: CL:2062
description: Mixed, incl. Cell shape, and Penicillin-binding protein, transpeptidase
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2062_Mixed,_incl._Cell_shape,_and_Penicillin-binding_protein,_transpeptidase


id: CL:2064
description: Cell shape, and Penicillin-binding protein, transpeptidase
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2064_Cell_shape,_and_Penicillin-binding_protein,_transpeptidase


id: CL:2066
description: Cell shape, and Penicillin-binding protein, dimerisation domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2066_Cell_shape,_and_Penicillin-binding_protein,_dimerisation_domain_superfamily


id: CL:2069
description: Mur ligase, central, and UDP-glycosyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2069_Mur_ligase,_central,_and_UDP-glycosyltransferase_activity


id: CL:2084
description: Penicillin-binding protein, dimerisation domain superfamily, and Cell cycle protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2084_Penicillin-binding_protein,_dimerisation_domain_superfamily,_and_Cell_cycle_protein


id: CL:2115
description: Carboxypeptidase activity, and Bacterial SH3 domain homologues
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2115_Carboxypeptidase_activity,_and_Bacterial_SH3_domain_homologues


id: CL:2119
description: Penicillin-binding protein, C-terminal domain superfamily, and Peptidase M15B
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2119_Penicillin-binding_protein,_C-terminal_domain_superfamily,_and_Peptidase_M15B


id: CL:2139
description: Mixed, incl. PDZ domain 6, and Enzyme binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2139_Mixed,_incl._PDZ_domain_6,_and_Enzyme_binding


id: CL:2156
description: Mixed, incl. Identical protein binding, and S4 RNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2156_Mixed,_incl._Identical_protein_binding,_and_S4_RNA-binding_domain


id: CL:2159
description: Mixed, incl. Nucleotide-binding alpha-beta plait domain superfamily, and Reproductive process
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2159_Mixed,_incl._Nucleotide-binding_alpha-beta_plait_domain_superfamily,_and_Reproductive_process


id: CL:2180
description: Mixed, incl. Adenosine deaminase activity, and Exonuclease, RNase T/DNA polymerase III
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2180_Mixed,_incl._Adenosine_deaminase_activity,_and_Exonuclease,_RNase_T/DNA_polymerase_III


id: CL:2189
description: Mixed, incl. rRNA processing, and Endospore-forming forespore
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2189_Mixed,_incl._rRNA_processing,_and_Endospore-forming_forespore


id: CL:2190
description: Mixed, incl. Endospore-forming forespore, and Ribosome biogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2190_Mixed,_incl._Endospore-forming_forespore,_and_Ribosome_biogenesis


id: CL:2192
description: Mixed, incl. Ribosome biogenesis, and Bacterial regulatory proteins, luxR family
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2192_Mixed,_incl._Ribosome_biogenesis,_and_Bacterial_regulatory_proteins,_luxR_family


id: CL:2213
description: Mixed, incl. Endospore-forming forespore, and dGTP catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2213_Mixed,_incl._Endospore-forming_forespore,_and_dGTP_catabolic_process


id: CL:2229
description: Mixed, incl. Outer membrane, and rRNA (adenine) methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2229_Mixed,_incl._Outer_membrane,_and_rRNA_(adenine)_methyltransferase_activity


id: CL:2249
description: Mixed, incl. K Homology domain, type 1, and Phosphonate and phosphinate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2249_Mixed,_incl._K_Homology_domain,_type_1,_and_Phosphonate_and_phosphinate_metabolism


id: CL:225
description: Mixed, incl. Fatty acid biosynthetic process, and Benzoate degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:225_Mixed,_incl._Fatty_acid_biosynthetic_process,_and_Benzoate_degradation


id: CL:226
description: Mixed, incl. Fatty acid biosynthetic process, and Alpha/Beta hydrolase fold
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:226_Mixed,_incl._Fatty_acid_biosynthetic_process,_and_Alpha/Beta_hydrolase_fold


id: CL:2260
description: Mixed, incl. tRNA threonylcarbamoyladenosine modification, and Protein acylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2260_Mixed,_incl._tRNA_threonylcarbamoyladenosine_modification,_and_Protein_acylation


id: CL:2264
description: Mixed, incl. Transglycosylase SLT domain, and DHBP synthase RibB-like alpha/beta domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2264_Mixed,_incl._Transglycosylase_SLT_domain,_and_DHBP_synthase_RibB-like_alpha/beta_domain_superfamily


id: CL:227
description: Fatty acid metabolism, and Nitronate monooxygenase
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:227_Fatty_acid_metabolism,_and_Nitronate_monooxygenase


id: CL:2279
description: tRNA threonylcarbamoyladenosine modification, and Protein acylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2279_tRNA_threonylcarbamoyladenosine_modification,_and_Protein_acylation


id: CL:2289
description: Mixed, incl. Queuosine biosynthesis, and 4Fe-4S single cluster domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2289_Mixed,_incl._Queuosine_biosynthesis,_and_4Fe-4S_single_cluster_domain


id: CL:2291
description: Queuosine biosynthesis, and 4Fe-4S single cluster domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2291_Queuosine_biosynthesis,_and_4Fe-4S_single_cluster_domain


id: CL:231
description: Fatty acid metabolism, and Nitronate monooxygenase
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:231_Fatty_acid_metabolism,_and_Nitronate_monooxygenase


id: CL:2311
description: Mixed, incl. Channel activity, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2311_Mixed,_incl._Channel_activity,_and_Signal


id: CL:2323
description: Mixed, incl. Sulfur relay system, and Sulfur compound metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2323_Mixed,_incl._Sulfur_relay_system,_and_Sulfur_compound_metabolic_process


id: CL:2324
description: Mixed, incl. Sulfur relay system, and Sulfur compound metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2324_Mixed,_incl._Sulfur_relay_system,_and_Sulfur_compound_metabolic_process


id: CL:2325
description: Mixed, incl. Thiamine biosynthetic process, and Metallo-beta-lactamase
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2325_Mixed,_incl._Thiamine_biosynthetic_process,_and_Metallo-beta-lactamase


id: CL:2326
description: Mixed, incl. Thiamine biosynthetic process, and Sulfur relay system
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2326_Mixed,_incl._Thiamine_biosynthetic_process,_and_Sulfur_relay_system


id: CL:2327
description: Mixed, incl. Thiamine biosynthetic process, and JAB/MPN domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2327_Mixed,_incl._Thiamine_biosynthetic_process,_and_JAB/MPN_domain


id: CL:2329
description: Sulfate assimilation, and Sulfur relay system
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2329_Sulfate_assimilation,_and_Sulfur_relay_system


id: CL:2364
description: Mixed, incl. Creatinase, N-terminal, and Uroporphyrinogen decarboxylase (URO-D)
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2364_Mixed,_incl._Creatinase,_N-terminal,_and_Uroporphyrinogen_decarboxylase_(URO-D)


id: CL:2374
description: Glyoxalase/fosfomycin resistance/dioxygenase domain, and Metallo-beta-lactamase
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2374_Glyoxalase/fosfomycin_resistance/dioxygenase_domain,_and_Metallo-beta-lactamase


id: CL:2376
description: Protein-tyrosine phosphatase, low molecular weight, and MraW methylase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2376_Protein-tyrosine_phosphatase,_low_molecular_weight,_and_MraW_methylase_family


id: CL:2388
description: Glyoxalase/fosfomycin resistance/dioxygenase domain, and Antibiotic metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2388_Glyoxalase/fosfomycin_resistance/dioxygenase_domain,_and_Antibiotic_metabolic_process


id: CL:2405
description: Iron-sulfur cluster assembly, and Transcription regulator Rrf2
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2405_Iron-sulfur_cluster_assembly,_and_Transcription_regulator_Rrf2


id: CL:2421
description: SUF system FeS cluster assembly, SufBD, and Cysteine desulfurase
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2421_SUF_system_FeS_cluster_assembly,_SufBD,_and_Cysteine_desulfurase


id: CL:2437
description: Mixed, incl. Heme metabolic process, and PP-loop family
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2437_Mixed,_incl._Heme_metabolic_process,_and_PP-loop_family


id: CL:2438
description: Heme metabolic process, and Cobalamin metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2438_Heme_metabolic_process,_and_Cobalamin_metabolic_process


id: CL:2447
description: Mixed, incl. PP-loop family, and HDIG domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2447_Mixed,_incl._PP-loop_family,_and_HDIG_domain


id: CL:2456
description: Mixed, incl. Polysaccharide metabolic process, and Starch and sucrose metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2456_Mixed,_incl._Polysaccharide_metabolic_process,_and_Starch_and_sucrose_metabolism


id: CL:2457
description: Mixed, incl. Polysaccharide metabolic process, and Starch and sucrose metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2457_Mixed,_incl._Polysaccharide_metabolic_process,_and_Starch_and_sucrose_metabolism


id: CL:2459
description: Mixed, incl. Polysaccharide metabolic process, and Hexosyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2459_Mixed,_incl._Polysaccharide_metabolic_process,_and_Hexosyltransferase_activity


id: CL:2460
description: Polysaccharide biosynthetic process, and Hexosyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2460_Polysaccharide_biosynthetic_process,_and_Hexosyltransferase_activity


id: CL:2461
description: Polysaccharide biosynthetic process, and O-Antigen nucleotide sugar biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2461_Polysaccharide_biosynthetic_process,_and_O-Antigen_nucleotide_sugar_biosynthesis


id: CL:2462
description: Polysaccharide biosynthetic process, and NAD(P)-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2462_Polysaccharide_biosynthetic_process,_and_NAD(P)-binding_domain


id: CL:2463
description: Polysaccharide biosynthetic process, and NAD(P)-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2463_Polysaccharide_biosynthetic_process,_and_NAD(P)-binding_domain


id: CL:2464
description: O-Antigen nucleotide sugar biosynthesis, and Glycosyl transferase family 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2464_O-Antigen_nucleotide_sugar_biosynthesis,_and_Glycosyl_transferase_family_2


id: CL:2466
description: Mixed, incl. NAD(P)-binding domain, and Nucleotidyl transferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2466_Mixed,_incl._NAD(P)-binding_domain,_and_Nucleotidyl_transferase_domain


id: CL:2499
description: Polysaccharide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2499_Polysaccharide_biosynthetic_process


id: CL:2501
description: Liposaccharide metabolic process, and UDP binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2501_Liposaccharide_metabolic_process,_and_UDP_binding_domain


id: CL:2520
description: Glycosyl transferases group 1, and Transposase IS200-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2520_Glycosyl_transferases_group_1,_and_Transposase_IS200-like


id: CL:2529
description: Mixed, incl. Glycosyl transferase, family 28, C-terminal, and G5 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2529_Mixed,_incl._Glycosyl_transferase,_family_28,_C-terminal,_and_G5_domain


id: CL:2539
description: Glycogen metabolic process, and Carbohydrate phosphorylase
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2539_Glycogen_metabolic_process,_and_Carbohydrate_phosphorylase


id: CL:2562
description: Protein glycosylation, and Xylan metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2562_Protein_glycosylation,_and_Xylan_metabolic_process


id: CL:258
description: Mixed, incl. Alpha/Beta hydrolase fold, and ANL, N-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:258_Mixed,_incl._Alpha/Beta_hydrolase_fold,_and_ANL,_N-terminal_domain


id: CL:2581
description: NUDIX domain, and RNA 3-end processing
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2581_NUDIX_domain,_and_RNA_3-end_processing


id: CL:2590
description: Mixed, incl. Cupin domain, and GNAT domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2590_Mixed,_incl._Cupin_domain,_and_GNAT_domain


id: CL:2592
description: Mixed, incl. AhpD-like, and Cupin domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2592_Mixed,_incl._AhpD-like,_and_Cupin_domain


id: CL:2593
description: Mixed, incl. AhpD-like, and Cupin domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2593_Mixed,_incl._AhpD-like,_and_Cupin_domain


id: CL:260
description: ANL, N-terminal domain, and ACP-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:260_ANL,_N-terminal_domain,_and_ACP-like_superfamily


id: CL:2614
description: Mixed, incl. DJ-1/PfpI, and Acetyltransferase (GNAT) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2614_Mixed,_incl._DJ-1/PfpI,_and_Acetyltransferase_(GNAT)_domain


id: CL:2635
description: Mixed, incl. Oxidative phosphorylation, and Inorganic anion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2635_Mixed,_incl._Oxidative_phosphorylation,_and_Inorganic_anion_transport


id: CL:2636
description: Mixed, incl. Oxidative phosphorylation, and Inorganic anion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2636_Mixed,_incl._Oxidative_phosphorylation,_and_Inorganic_anion_transport


id: CL:2637
description: Oxidative phosphorylation, and Fluoride transmembrane transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2637_Oxidative_phosphorylation,_and_Fluoride_transmembrane_transport


id: CL:2639
description: Mixed, incl. Proton-transporting two-sector ATPase complex, and P-type calcium transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2639_Mixed,_incl._Proton-transporting_two-sector_ATPase_complex,_and_P-type_calcium_transporter_activity


id: CL:2640
description: Proton-transporting two-sector ATPase complex, and P-type calcium transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2640_Proton-transporting_two-sector_ATPase_complex,_and_P-type_calcium_transporter_activity


id: CL:2643
description: Proton-transporting two-sector ATPase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2643_Proton-transporting_two-sector_ATPase_complex


id: CL:2667
description: Mixed, incl. Histidinol-phosphatase activity, and AsnC-type HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2667_Mixed,_incl._Histidinol-phosphatase_activity,_and_AsnC-type_HTH_domain


id: CL:2679
description: Fluoride transmembrane transport, and Inorganic pyrophosphatase
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2679_Fluoride_transmembrane_transport,_and_Inorganic_pyrophosphatase


id: CL:2688
description: Mixed, incl. Phosphate ion transport, and Haloacid dehalogenase-like hydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2688_Mixed,_incl._Phosphate_ion_transport,_and_Haloacid_dehalogenase-like_hydrolase


id: CL:2689
description: Mixed, incl. Haloacid dehalogenase-like hydrolase, and Lactate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2689_Mixed,_incl._Haloacid_dehalogenase-like_hydrolase,_and_Lactate_transport


id: CL:2690
description: Haloacid dehalogenase-like hydrolase, and Polyphosphate kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2690_Haloacid_dehalogenase-like_hydrolase,_and_Polyphosphate_kinase_activity


id: CL:2703
description: Lactate transport, and FAD binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2703_Lactate_transport,_and_FAD_binding_domain


id: CL:2712
description: Phosphate ion transport, and ATP-cone domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2712_Phosphate_ion_transport,_and_ATP-cone_domain


id: CL:2731
description: Mixed, incl. Potassium ion transmembrane transport, and Response to inorganic substance
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2731_Mixed,_incl._Potassium_ion_transmembrane_transport,_and_Response_to_inorganic_substance


id: CL:2732
description: Mixed, incl. Potassium uptake protein TrkA, and Response to inorganic substance
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2732_Mixed,_incl._Potassium_uptake_protein_TrkA,_and_Response_to_inorganic_substance


id: CL:2735
description: Potassium uptake protein TrkA, and Cation transport ATPase (P-type)
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2735_Potassium_uptake_protein_TrkA,_and_Cation_transport_ATPase_(P-type)


id: CL:2748
description: Mixed, incl. Sortase domain, and Collagen binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2748_Mixed,_incl._Sortase_domain,_and_Collagen_binding


id: CL:275
description: Serine aminopeptidase, S33, and Phosphopantetheine
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:275_Serine_aminopeptidase,_S33,_and_Phosphopantetheine


id: CL:2758
description: Chloride transport, and Regulator of K+ conductance, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2758_Chloride_transport,_and_Regulator_of_K+_conductance,_N-terminal


id: CL:2773
description: Mostly uncharacterized, incl. RNA capping, and THUMP domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2773_Mostly_uncharacterized,_incl._RNA_capping,_and_THUMP_domain


id: CL:2775
description: Mixed, incl. Nucleoplasm, and Branched-chain amino acid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2775_Mixed,_incl._Nucleoplasm,_and_Branched-chain_amino_acid_transport


id: CL:2802
description: Mostly uncharacterized, incl. Starch and sucrose metabolism, and Acyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2802_Mostly_uncharacterized,_incl._Starch_and_sucrose_metabolism,_and_Acyltransferase_activity


id: CL:2803
description: Mixed, incl. Starch and sucrose metabolism, and Integral component of membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2803_Mixed,_incl._Starch_and_sucrose_metabolism,_and_Integral_component_of_membrane


id: CL:2804
description: Mostly uncharacterized, incl. Starch and sucrose metabolism, and Acyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2804_Mostly_uncharacterized,_incl._Starch_and_sucrose_metabolism,_and_Acyltransferase_activity


id: CL:2806
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2806_Mostly_uncharacterized,_incl._Starch_and_sucrose_metabolism,_and_Cationic_antimicrobial_peptide_(CAMP)_resistance

description:
  Mostly uncharacterized, incl. Starch and sucrose metabolism, and Cationic antimicrobial peptide (CAMP) resistance


id: CL:2808
description: Mostly uncharacterized, incl. GNAT domain, and Peptidase M42
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2808_Mostly_uncharacterized,_incl._GNAT_domain,_and_Peptidase_M42


id: CL:2809
description: Mostly uncharacterized, incl. Peptidase M42, and ABC-2 family transporter protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2809_Mostly_uncharacterized,_incl._Peptidase_M42,_and_ABC-2_family_transporter_protein


id: CL:2811
description: Mostly uncharacterized, incl. ABC-2 family transporter protein, and Identical protein binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2811_Mostly_uncharacterized,_incl._ABC-2_family_transporter_protein,_and_Identical_protein_binding


id: CL:2812
description: Mostly uncharacterized, incl. ABC-2 family transporter protein, and Identical protein binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2812_Mostly_uncharacterized,_incl._ABC-2_family_transporter_protein,_and_Identical_protein_binding


id: CL:2814
description: Mostly uncharacterized, incl. Identical protein binding, and Zinc-ribbon domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2814_Mostly_uncharacterized,_incl._Identical_protein_binding,_and_Zinc-ribbon_domain


id: CL:2817
description: Mostly uncharacterized, incl. Identical protein binding, and Zinc-ribbon domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2817_Mostly_uncharacterized,_incl._Identical_protein_binding,_and_Zinc-ribbon_domain


id: CL:2820
description: Mixed, incl. Identical protein binding, and Zinc-ribbon domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2820_Mixed,_incl._Identical_protein_binding,_and_Zinc-ribbon_domain


id: CL:2822
description: Mixed, incl. Zinc-ribbon domain, and P-type ATPase, cytoplasmic domain N
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2822_Mixed,_incl._Zinc-ribbon_domain,_and_P-type_ATPase,_cytoplasmic_domain_N


id: CL:287
description: acetyl-CoA carboxylase complex, and Pyruvate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:287_acetyl-CoA_carboxylase_complex,_and_Pyruvate_metabolism


id: CL:2870
description: Mixed, incl. ABC-2 family transporter protein, and Putative peptidoglycan binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2870_Mixed,_incl._ABC-2_family_transporter_protein,_and_Putative_peptidoglycan_binding_domain


id: CL:2872
description: Mixed, incl. ABC-2 family transporter protein, and Acetyltransferase (GNAT) family
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2872_Mixed,_incl._ABC-2_family_transporter_protein,_and_Acetyltransferase_(GNAT)_family


id: CL:2882
description: Mixed, incl. ABC-2 family transporter protein, and Putative peptidoglycan binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2882_Mixed,_incl._ABC-2_family_transporter_protein,_and_Putative_peptidoglycan_binding_domain


id: CL:289
description: Biotin-binding site, and Na+-transporting oxaloacetate decarboxylase beta subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:289_Biotin-binding_site,_and_Na+-transporting_oxaloacetate_decarboxylase_beta_subunit


id: CL:2893
description: Mixed, incl. Chromosome partition, and Dimeric alpha-beta barrel
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2893_Mixed,_incl._Chromosome_partition,_and_Dimeric_alpha-beta_barrel


id: CL:2905
description: Peptidase M42, and Arginine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2905_Peptidase_M42,_and_Arginine_biosynthesis


id: CL:2915
description: Bacterial membrane protein YfhO, and Type 1 protein exporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2915_Bacterial_membrane_protein_YfhO,_and_Type_1_protein_exporter


id: CL:2937
description: Mixed, incl. RpiR-like, SIS domain, and Sulfite exporter TauE/SafE
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2937_Mixed,_incl._RpiR-like,_SIS_domain,_and_Sulfite_exporter_TauE/SafE


id: CL:2939
description: Mixed, incl. Primosome complex, and DNA replication initiation
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2939_Mixed,_incl._Primosome_complex,_and_DNA_replication_initiation


id: CL:2975
description: Mixed, incl. Positive regulation of catalytic activity, and Adenylate cyclase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2975_Mixed,_incl._Positive_regulation_of_catalytic_activity,_and_Adenylate_cyclase_activity


id: CL:2992
description: Mostly uncharacterized, incl. Baseplate J-like protein, and EAL domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2992_Mostly_uncharacterized,_incl._Baseplate_J-like_protein,_and_EAL_domain


id: CL:2993
description: Mostly uncharacterized, incl. Baseplate J-like protein, and LysM domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2993_Mostly_uncharacterized,_incl._Baseplate_J-like_protein,_and_LysM_domain


id: CL:2994
description: Mostly uncharacterized, incl. Transposase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2994_Mostly_uncharacterized,_incl._Transposase_activity


id: CL:2996
description: Mixed, incl. Transposase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:2996_Mixed,_incl._Transposase_activity


id: CL:3014
description: Mixed, incl. Baseplate J-like protein, and LysM domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3014_Mixed,_incl._Baseplate_J-like_protein,_and_LysM_domain


id: CL:3026
description: Mixed, incl. EAL domain, and Ferrous iron transporter FeoA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3026_Mixed,_incl._EAL_domain,_and_Ferrous_iron_transporter_FeoA_domain


id: CL:3043
description: Mixed, incl. Protein acylation, and MPN domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3043_Mixed,_incl._Protein_acylation,_and_MPN_domain


id: CL:3064
description: Mixed, incl. Cell differentiation, and Rhs repeat-associated core
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3064_Mixed,_incl._Cell_differentiation,_and_Rhs_repeat-associated_core


id: CL:3065
description: Mixed, incl. Cell differentiation, and Rhs repeat-associated core
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3065_Mixed,_incl._Cell_differentiation,_and_Rhs_repeat-associated_core


id: CL:3066
description: Mixed, incl. Cell differentiation, and Manganese catalase
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3066_Mixed,_incl._Cell_differentiation,_and_Manganese_catalase


id: CL:3068
description: Cell differentiation, and Manganese catalase
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3068_Cell_differentiation,_and_Manganese_catalase


id: CL:3070
description: Cell differentiation, and Sigma-70 region 3
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3070_Cell_differentiation,_and_Sigma-70_region_3


id: CL:3071
description: Cell differentiation, and Sigma-70 region 3
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3071_Cell_differentiation,_and_Sigma-70_region_3


id: CL:3072
description: Sporulation, and Sigma-70 region 3
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3072_Sporulation,_and_Sigma-70_region_3


id: CL:3074
description: Sporulation, and Sigma-70 region 3
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3074_Sporulation,_and_Sigma-70_region_3


id: CL:308
description: Citrate cycle (TCA cycle), and Aminobenzoate degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:308_Citrate_cycle_(TCA_cycle),_and_Aminobenzoate_degradation


id: CL:3080
description: Mixed, incl. SpoVA, and Calcium
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3080_Mixed,_incl._SpoVA,_and_Calcium


id: CL:3100
description: Mixed, incl. Aspartyl protease, and PPM-type phosphatase-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3100_Mixed,_incl._Aspartyl_protease,_and_PPM-type_phosphatase-like_domain


id: CL:3120
description: Mixed, incl. Stage III sporulation protein AC/AD family, and DisA/LigA, helix-hairpin-helix motif
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3120_Mixed,_incl._Stage_III_sporulation_protein_AC/AD_family,_and_DisA/LigA,_helix-hairpin-helix_motif


id: CL:3123
description: Stage III sporulation protein AC/AD family, and Sporulation
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3123_Stage_III_sporulation_protein_AC/AD_family,_and_Sporulation


id: CL:3149
description: Spore germination, and Cell Wall Hydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3149_Spore_germination,_and_Cell_Wall_Hydrolase


id: CL:3150
description: Spore germination, and Cell Wall Hydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3150_Spore_germination,_and_Cell_Wall_Hydrolase


id: CL:3152
description: Cell Wall Hydrolase, and Extracellular space
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3152_Cell_Wall_Hydrolase,_and_Extracellular_space


id: CL:3175
description: Spore germination, and Ribonucleoside-triphosphate reductase, anaerobic
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3175_Spore_germination,_and_Ribonucleoside-triphosphate_reductase,_anaerobic


id: CL:3186
description: Mixed, incl. Spore germination, and Signal transduction response regulator, C-terminal effector
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3186_Mixed,_incl._Spore_germination,_and_Signal_transduction_response_regulator,_C-terminal_effector


id: CL:3207
description: Manganese catalase, and Transmembrane secretion effector
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3207_Manganese_catalase,_and_Transmembrane_secretion_effector


id: CL:321
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:321_Alanine,_aspartate_and_glutamate_metabolism,_and_4Fe-4S_ferredoxin,_iron-sulphur_binding,_conserved_site

description:
  Alanine, aspartate and glutamate metabolism, and 4Fe-4S ferredoxin, iron-sulphur binding, conserved site


id: CL:322
description: Alanine, aspartate and glutamate metabolism, and Glutamate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:322_Alanine,_aspartate_and_glutamate_metabolism,_and_Glutamate_biosynthetic_process


id: CL:3229
description: Mixed, incl. Rhs repeat-associated core, and Band 7 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3229_Mixed,_incl._Rhs_repeat-associated_core,_and_Band_7_domain


id: CL:3231
description: Mixed, incl. Rhs repeat-associated core, and Amidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3231_Mixed,_incl._Rhs_repeat-associated_core,_and_Amidase_activity


id: CL:3254
description: Mostly uncharacterized, incl. Protein of unknown function DUF6442, and HD domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3254_Mostly_uncharacterized,_incl._Protein_of_unknown_function_DUF6442,_and_HD_domain


id: CL:3256
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3256_Mostly_uncharacterized,_incl._O-methyltransferase_domain,_and_Protein-glutamine_gamma-glutamyltransferase_activity

description:
  Mostly uncharacterized, incl. O-methyltransferase domain, and Protein-glutamine gamma-glutamyltransferase activity


id: CL:3257
description: Mixed, incl. O-methyltransferase domain, and Protein-glutamine gamma-glutamyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3257_Mixed,_incl._O-methyltransferase_domain,_and_Protein-glutamine_gamma-glutamyltransferase_activity


id: CL:3268
description: Mixed, incl. Ferric-uptake regulator, and Queuosine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3268_Mixed,_incl._Ferric-uptake_regulator,_and_Queuosine_metabolic_process


id: CL:3284
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3284_Mixed,_incl._Protein_of_unknown_function_DUF6442,_and_Small_acid-soluble_spore_protein,_thioredoxin-like

description:
  Mixed, incl. Protein of unknown function DUF6442, and Small acid-soluble spore protein, thioredoxin-like


id: CL:3285
description: Protein of unknown function DUF6442, and Helix-turn-helix XRE-family like proteins
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3285_Protein_of_unknown_function_DUF6442,_and_Helix-turn-helix_XRE-family_like_proteins


id: CL:3294
description: Mixed, incl. Small acid-soluble spore protein, thioredoxin-like, and Endospore-forming forespore
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3294_Mixed,_incl._Small_acid-soluble_spore_protein,_thioredoxin-like,_and_Endospore-forming_forespore


id: CL:3303
description: Mixed, incl. Cro/C1-type helix-turn-helix domain, and YibE/F-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3303_Mixed,_incl._Cro/C1-type_helix-turn-helix_domain,_and_YibE/F-like


id: CL:3304
description: Mixed, incl. Cro/C1-type helix-turn-helix domain, and YibE/F-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3304_Mixed,_incl._Cro/C1-type_helix-turn-helix_domain,_and_YibE/F-like


id: CL:3305
description: Mixed, incl. YibE/F-like, and Acetyltransferase (GNAT) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3305_Mixed,_incl._YibE/F-like,_and_Acetyltransferase_(GNAT)_domain


id: CL:3306
description: Mixed, incl. YibE/F-like, and Acetyltransferase (GNAT) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3306_Mixed,_incl._YibE/F-like,_and_Acetyltransferase_(GNAT)_domain


id: CL:3322
description: Mixed, incl. IMP cyclohydrolase activity, and Protein of unknown function DUF4317
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3322_Mixed,_incl._IMP_cyclohydrolase_activity,_and_Protein_of_unknown_function_DUF4317


id: CL:3335
description: Helix-turn-helix, and Helix-turn-helix XRE-family like proteins
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3335_Helix-turn-helix,_and_Helix-turn-helix_XRE-family_like_proteins


id: CL:3349
description: Mixed, incl. Hexapeptide transferase, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3349_Mixed,_incl._Hexapeptide_transferase,_conserved_site


id: CL:3359
description: Mixed, incl. HxlR-like helix-turn-helix, and mRNA interferase PemK-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3359_Mixed,_incl._HxlR-like_helix-turn-helix,_and_mRNA_interferase_PemK-like


id: CL:3361
description: HxlR-like helix-turn-helix, and mRNA interferase PemK-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3361_HxlR-like_helix-turn-helix,_and_mRNA_interferase_PemK-like


id: CL:3381
description: Mixed, incl. ATP-cone domain, and Glycyl-radical enzyme activating activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3381_Mixed,_incl._ATP-cone_domain,_and_Glycyl-radical_enzyme_activating_activity


id: CL:3393
description: Mostly uncharacterized, incl. LytR_cpsA_psr family, and Putative amidase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3393_Mostly_uncharacterized,_incl._LytR_cpsA_psr_family,_and_Putative_amidase_domain


id: CL:3395
description: Mixed, incl. LytR_cpsA_psr family, and Putative amidase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3395_Mixed,_incl._LytR_cpsA_psr_family,_and_Putative_amidase_domain


id: CL:3418
description: Mixed, incl. Glycerol metabolic process, and TraX
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3418_Mixed,_incl._Glycerol_metabolic_process,_and_TraX


id: CL:3419
description: Mixed, incl. Glycerol metabolic process, and tRNA 3-end processing
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3419_Mixed,_incl._Glycerol_metabolic_process,_and_tRNA_3-end_processing


id: CL:3420
description: DegV, and Haloacid dehalogenase-like hydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3420_DegV,_and_Haloacid_dehalogenase-like_hydrolase


id: CL:3439
description: Mixed, incl. tRNA 3-end processing, and Transcription regulator PadR, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3439_Mixed,_incl._tRNA_3-end_processing,_and_Transcription_regulator_PadR,_N-terminal


id: CL:3454
description: Mixed, incl. TraX, and Threonine/Serine exporter, ThrE
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3454_Mixed,_incl._TraX,_and_Threonine/Serine_exporter,_ThrE


id: CL:3456
description: Threonine/Serine exporter, ThrE, and Thymidine phosphorylase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3456_Threonine/Serine_exporter,_ThrE,_and_Thymidine_phosphorylase_activity


id: CL:3480
description: Mixed, incl. RDD family, and P-type ATPase, subfamily IIB
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3480_Mixed,_incl._RDD_family,_and_P-type_ATPase,_subfamily_IIB


id: CL:349
description: 4Fe-4S binding domain, and NADH dehydrogenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:349_4Fe-4S_binding_domain,_and_NADH_dehydrogenase_activity


id: CL:3498
description: Mixed, incl. Cellular metal ion homeostasis, and Alpha-helical ferredoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3498_Mixed,_incl._Cellular_metal_ion_homeostasis,_and_Alpha-helical_ferredoxin


id: CL:3499
description: Mixed, incl. Cellular metal ion homeostasis, and Aldo/keto reductase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3499_Mixed,_incl._Cellular_metal_ion_homeostasis,_and_Aldo/keto_reductase_family


id: CL:3500
description: Aldo/keto reductase family, and Cellular metal ion homeostasis
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3500_Aldo/keto_reductase_family,_and_Cellular_metal_ion_homeostasis


id: CL:3513
description: Mixed, incl. Nickel, and PurE domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3513_Mixed,_incl._Nickel,_and_PurE_domain


id: CL:3523
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3523_Mixed,_incl._Glutamate_synthase_(NADPH),_homotetrameric,_and_Cytochrome-c3_hydrogenase,_gamma_subunit

description:
  Mixed, incl. Glutamate synthase (NADPH), homotetrameric, and Cytochrome-c3 hydrogenase, gamma subunit


id: CL:3540
description: Mixed, incl. Regulation of RNA biosynthetic process, and Integral component of membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3540_Mixed,_incl._Regulation_of_RNA_biosynthetic_process,_and_Integral_component_of_membrane


id: CL:3541
description: Mixed, incl. Regulation of RNA biosynthetic process, and beta-Lactam resistance
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3541_Mixed,_incl._Regulation_of_RNA_biosynthetic_process,_and_beta-Lactam_resistance


id: CL:3543
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3543_Mostly_uncharacterized,_incl._MerR_transcriptional_regulator,_and_Bacterial_transcription_activator,_effector_binding

description:
  Mostly uncharacterized, incl. MerR transcriptional regulator, and Bacterial transcription activator, effector binding


id: CL:3544
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3544_Mostly_uncharacterized,_incl._MerR_transcriptional_regulator,_and_Bacterial_transcription_activator,_effector_binding

description:
  Mostly uncharacterized, incl. MerR transcriptional regulator, and Bacterial transcription activator, effector binding


id: CL:3546
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3546_Mostly_uncharacterized,_incl._MerR_transcriptional_regulator,_and_Bacterial_transcription_activator,_effector_binding

description:
  Mostly uncharacterized, incl. MerR transcriptional regulator, and Bacterial transcription activator, effector binding


id: CL:3548
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3548_Mixed,_incl._MerR_transcriptional_regulator,_and_Bacterial_transcription_activator,_effector_binding

description:
  Mixed, incl. MerR transcriptional regulator, and Bacterial transcription activator, effector binding


id: CL:3549
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3549_Mixed,_incl._MerR_transcriptional_regulator,_and_Bacterial_transcription_activator,_effector_binding_domain

description:
  Mixed, incl. MerR transcriptional regulator, and Bacterial transcription activator, effector binding domain


id: CL:3550
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3550_Mixed,_incl._MerR_transcriptional_regulator,_and_Bacterial_transcription_activator,_effector_binding_domain

description:
  Mixed, incl. MerR transcriptional regulator, and Bacterial transcription activator, effector binding domain


id: CL:3551
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3551_Mixed,_incl._MerR_transcriptional_regulator,_and_Bacterial_transcription_activator,_effector_binding_domain

description:
  Mixed, incl. MerR transcriptional regulator, and Bacterial transcription activator, effector binding domain


id: CL:3554
description: Bacterial transcription activator, effector binding domain, and Sigma-70 region 3
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3554_Bacterial_transcription_activator,_effector_binding_domain,_and_Sigma-70_region_3


id: CL:3575
description: Mixed, incl. Amidohydrolase, and Beta-lactamase-related
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3575_Mixed,_incl._Amidohydrolase,_and_Beta-lactamase-related


id: CL:3576
description: Mixed, incl. Beta-lactamase-related, and ABC-2 transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3576_Mixed,_incl._Beta-lactamase-related,_and_ABC-2_transporter


id: CL:3585
description: Mixed, incl. Amidohydrolase, and MacB-like periplasmic core domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3585_Mixed,_incl._Amidohydrolase,_and_MacB-like_periplasmic_core_domain


id: CL:3598
description: Mixed, incl. beta-Lactam resistance
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3598_Mixed,_incl._beta-Lactam_resistance


id: CL:3613
description: Mixed, incl. L-methylmalonyl-CoA metabolic process, and Cyclase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3613_Mixed,_incl._L-methylmalonyl-CoA_metabolic_process,_and_Cyclase_activity


id: CL:3634
description: Mixed, incl. 5-bromo-4-chloroindolyl phosphate hydrolysis protein, and Protein ubiquitination
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3634_Mixed,_incl._5-bromo-4-chloroindolyl_phosphate_hydrolysis_protein,_and_Protein_ubiquitination


id: CL:3654
description: Mixed, incl. Pantothenate biosynthetic process, and Encapsulin nanocompartment
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3654_Mixed,_incl._Pantothenate_biosynthetic_process,_and_Encapsulin_nanocompartment


id: CL:3665
description: Mixed, incl. YjbR, and RNA ligase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3665_Mixed,_incl._YjbR,_and_RNA_ligase_activity


id: CL:3669
description: Mixed, incl. YjbR, and RNA ligase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3669_Mixed,_incl._YjbR,_and_RNA_ligase_activity


id: CL:3683
description: Mixed, incl. Flavin reductase like domain, and Vitamin catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3683_Mixed,_incl._Flavin_reductase_like_domain,_and_Vitamin_catabolic_process


id: CL:369
description: Mixed, incl. Short-chain dehydrogenase/reductase SDR, and DeoR C-terminal sensor domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:369_Mixed,_incl._Short-chain_dehydrogenase/reductase_SDR,_and_DeoR_C-terminal_sensor_domain


id: CL:3699
description: Mixed, incl. Uncharacterised membrane protein YitT, and Helix-turn-helix XRE-family like proteins
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3699_Mixed,_incl._Uncharacterised_membrane_protein_YitT,_and_Helix-turn-helix_XRE-family_like_proteins


id: CL:3700
description: Mixed, incl. Uncharacterised membrane protein YitT, and Helix-turn-helix XRE-family like proteins
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3700_Mixed,_incl._Uncharacterised_membrane_protein_YitT,_and_Helix-turn-helix_XRE-family_like_proteins


id: CL:3701
description: Mixed, incl. VanZ-like, and Penicillin binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3701_Mixed,_incl._VanZ-like,_and_Penicillin_binding


id: CL:3702
description: Mixed, incl. VanZ-like, and Penicillin binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3702_Mixed,_incl._VanZ-like,_and_Penicillin_binding


id: CL:371
description: Mixed, incl. DeoR C-terminal sensor domain, and Enoyl-(Acyl carrier protein) reductase
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:371_Mixed,_incl._DeoR_C-terminal_sensor_domain,_and_Enoyl-(Acyl_carrier_protein)_reductase


id: CL:3716
description: Mixed, incl. Transcriptional regulator MarR-type, conserved site, and Major facilitator superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3716_Mixed,_incl._Transcriptional_regulator_MarR-type,_conserved_site,_and_Major_facilitator_superfamily


id: CL:3727
description: Mixed, incl. Phospholipase C/D, and Domain of unknown function DUF2179
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3727_Mixed,_incl._Phospholipase_C/D,_and_Domain_of_unknown_function_DUF2179


id: CL:3744
description: Mixed, incl. DUF218 domain, and Transglutaminase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3744_Mixed,_incl._DUF218_domain,_and_Transglutaminase-like


id: CL:3758
description: Mostly uncharacterized, incl. DNA-binding HTH domain, TetR-type, and Glycerophospholipid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3758_Mostly_uncharacterized,_incl._DNA-binding_HTH_domain,_TetR-type,_and_Glycerophospholipid_metabolism


id: CL:3759
description: Mixed, incl. DNA-binding HTH domain, TetR-type, and Glycerophospholipid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3759_Mixed,_incl._DNA-binding_HTH_domain,_TetR-type,_and_Glycerophospholipid_metabolism


id: CL:3760
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3760_Mostly_uncharacterized,_incl._CDP-alcohol_phosphatidyltransferase,_and_Helix_turn_helix_multiple_antibiotic_resistance_protein

description:
  Mostly uncharacterized, incl. CDP-alcohol phosphatidyltransferase, and Helix_turn_helix multiple antibiotic resistance protein


id: CL:3761
description: Mostly uncharacterized, incl. O-methyltransferase domain, and DNA alkylation repair enzyme
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3761_Mostly_uncharacterized,_incl._O-methyltransferase_domain,_and_DNA_alkylation_repair_enzyme


id: CL:3763
description: Mixed, incl. O-methyltransferase domain, and Heme transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3763_Mixed,_incl._O-methyltransferase_domain,_and_Heme_transport


id: CL:3785
description: Mixed, incl. CDP-alcohol phosphatidyltransferase, and Aminoacyl-tRNA editing domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3785_Mixed,_incl._CDP-alcohol_phosphatidyltransferase,_and_Aminoacyl-tRNA_editing_domain


id: CL:3801
description: Mixed, incl. RibD C-terminal domain, and DNA-binding HTH domain, TetR-type
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3801_Mixed,_incl._RibD_C-terminal_domain,_and_DNA-binding_HTH_domain,_TetR-type


id: CL:3804
description: Mixed, incl. RibD C-terminal domain, and Purine nucleobase transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3804_Mixed,_incl._RibD_C-terminal_domain,_and_Purine_nucleobase_transport


id: CL:3823
description: Mixed, incl. Histidinol-phosphatase activity, and Response to organic substance
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3823_Mixed,_incl._Histidinol-phosphatase_activity,_and_Response_to_organic_substance


id: CL:3835
description: Mixed, incl. TspO/MBR family, and Calcium/proton exchanger
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3835_Mixed,_incl._TspO/MBR_family,_and_Calcium/proton_exchanger


id: CL:3837
description: Mixed, incl. Calcium/proton exchanger, and CorA, cytoplasmic domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3837_Mixed,_incl._Calcium/proton_exchanger,_and_CorA,_cytoplasmic_domain


id: CL:3859
description: Mixed, incl. Signal, and RNA polymerase sigma-70 like
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3859_Mixed,_incl._Signal,_and_RNA_polymerase_sigma-70_like


id: CL:3860
description: Mixed, incl. Signal, and RNA polymerase sigma-70 like
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3860_Mixed,_incl._Signal,_and_RNA_polymerase_sigma-70_like


id: CL:3861
description: Mostly uncharacterized, incl. RNA polymerase sigma-70 like, and Glycoside hydrolase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3861_Mostly_uncharacterized,_incl._RNA_polymerase_sigma-70_like,_and_Glycoside_hydrolase_superfamily


id: CL:3862
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3862_Mostly_uncharacterized,_incl._Glycoside_hydrolase_superfamily,_and_BspA_type_Leucine_rich_repeat_region

description:
  Mostly uncharacterized, incl. Glycoside hydrolase superfamily, and BspA type Leucine rich repeat region


id: CL:3864
description: Mixed, incl. BspA type Leucine rich repeat region, and Glycoside hydrolase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3864_Mixed,_incl._BspA_type_Leucine_rich_repeat_region,_and_Glycoside_hydrolase_superfamily


id: CL:3866
description: Mixed, incl. Glycoside hydrolase superfamily, and FtsK domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3866_Mixed,_incl._Glycoside_hydrolase_superfamily,_and_FtsK_domain


id: CL:3868
description: Mixed, incl. FtsK domain, and Bacterial invasion of epithelial cells
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3868_Mixed,_incl._FtsK_domain,_and_Bacterial_invasion_of_epithelial_cells


id: CL:3869
description: Mixed, incl. FtsK domain, and Pilin-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3869_Mixed,_incl._FtsK_domain,_and_Pilin-like


id: CL:3880
description: Tumour necrosis factor-like domain superfamily, and Extracellular space
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3880_Tumour_necrosis_factor-like_domain_superfamily,_and_Extracellular_space


id: CL:389
description: Mixed, incl. PAS fold, and CoA-transferase family III
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:389_Mixed,_incl._PAS_fold,_and_CoA-transferase_family_III


id: CL:3892
description: Mixed, incl. Glycosidase, and NodB homology domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3892_Mixed,_incl._Glycosidase,_and_NodB_homology_domain


id: CL:3908
description: BspA type Leucine rich repeat region, and Cytidylate kinase-like family
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3908_BspA_type_Leucine_rich_repeat_region,_and_Cytidylate_kinase-like_family


id: CL:3924
description: Mostly uncharacterized, incl. Calcium ion binding, and Baseplate J-like protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3924_Mostly_uncharacterized,_incl._Calcium_ion_binding,_and_Baseplate_J-like_protein


id: CL:3926
description: Mixed, incl. Baseplate J-like protein, and Other glycan degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3926_Mixed,_incl._Baseplate_J-like_protein,_and_Other_glycan_degradation


id: CL:3929
description: Mixed, incl. Baseplate J-like protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3929_Mixed,_incl._Baseplate_J-like_protein


id: CL:3955
description: Mixed, incl. RNA polymerase sigma-70 like, and Sortase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3955_Mixed,_incl._RNA_polymerase_sigma-70_like,_and_Sortase_domain


id: CL:3957
description: Mixed, incl. RNA polymerase sigma-70 like, and Sortase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3957_Mixed,_incl._RNA_polymerase_sigma-70_like,_and_Sortase_domain


id: CL:3977
description: Mixed, incl. Enzyme inhibitor activity, and Transcriptional regulator C-terminal region
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3977_Mixed,_incl._Enzyme_inhibitor_activity,_and_Transcriptional_regulator_C-terminal_region


id: CL:3990
description: Mixed, incl. Undecaprenyl-diphosphatase UppP, and ComA-like, MBL domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3990_Mixed,_incl._Undecaprenyl-diphosphatase_UppP,_and_ComA-like,_MBL_domain


id: CL:3991
description: Mixed, incl. ComA-like, MBL domain, and Cytolysis
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:3991_Mixed,_incl._ComA-like,_MBL_domain,_and_Cytolysis


id: CL:400
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:400_Branched-chain_amino_acid_metabolic_process,_and_D-isomer_specific_2-hydroxyacid_dehydrogenase,_NAD-binding_domain

description:
  Branched-chain amino acid metabolic process, and D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain


id: CL:4002
description: Undecaprenyl-diphosphatase UppP, and Response to antibiotic
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4002_Undecaprenyl-diphosphatase_UppP,_and_Response_to_antibiotic


id: CL:401
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:401_Branched-chain_amino_acid_metabolic_process,_and_D-isomer_specific_2-hydroxyacid_dehydrogenase,_NAD-binding_domain

description:
  Branched-chain amino acid metabolic process, and D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain


id: CL:4011
description: Mixed, incl. Secretion, and Pilus organization
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4011_Mixed,_incl._Secretion,_and_Pilus_organization


id: CL:4012
description: Mixed, incl. Secretion, and GtrA-like protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4012_Mixed,_incl._Secretion,_and_GtrA-like_protein


id: CL:4015
description: Protein transport across the cell outer membrane, and GspF/PilC family
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4015_Protein_transport_across_the_cell_outer_membrane,_and_GspF/PilC_family


id: CL:403
description: Branched-chain amino acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:403_Branched-chain_amino_acid_metabolic_process


id: CL:4030
description: Mixed, incl. GtrA-like protein, and Phosphodiester glycosidase
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4030_Mixed,_incl._GtrA-like_protein,_and_Phosphodiester_glycosidase


id: CL:4043
description: Mostly uncharacterized, incl. GspF/PilC family, and Pilus organization
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4043_Mostly_uncharacterized,_incl._GspF/PilC_family,_and_Pilus_organization


id: CL:4046
description: Mixed, incl. GspF/PilC family, and Pilus organization
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4046_Mixed,_incl._GspF/PilC_family,_and_Pilus_organization


id: CL:405
description: Branched-chain amino acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:405_Branched-chain_amino_acid_metabolic_process


id: CL:4067
description: Mixed, incl. Signal transduction, and Cilium
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4067_Mixed,_incl._Signal_transduction,_and_Cilium


id: CL:4068
description: Mixed, incl. Signal transduction, and Cilium
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4068_Mixed,_incl._Signal_transduction,_and_Cilium


id: CL:407
description: Leucine biosynthesis, and Acetolactate synthase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:407_Leucine_biosynthesis,_and_Acetolactate_synthase_activity


id: CL:4070
description: Signal transduction, and Cilium
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4070_Signal_transduction,_and_Cilium


id: CL:4071
description: Signal transduction, and Cilium
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4071_Signal_transduction,_and_Cilium


id: CL:4073
description: Signal transduction, and Cilium
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4073_Signal_transduction,_and_Cilium


id: CL:4074
description: Cilium, and Bacterial chemotaxis
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4074_Cilium,_and_Bacterial_chemotaxis


id: CL:4081
description: Bacterial-type flagellum basal body, and Bacterial flagellum biogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4081_Bacterial-type_flagellum_basal_body,_and_Bacterial_flagellum_biogenesis


id: CL:4082
description: Bacterial-type flagellum basal body
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4082_Bacterial-type_flagellum_basal_body


id: CL:4102
description: Bacterial flagellum protein export, and Cell projection assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4102_Bacterial_flagellum_protein_export,_and_Cell_projection_assembly


id: CL:4126
description: Bacterial-type flagellum hook, and Flagellin
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4126_Bacterial-type_flagellum_hook,_and_Flagellin


id: CL:4157
description: CheW-like domain, and Chemotaxis
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4157_CheW-like_domain,_and_Chemotaxis


id: CL:4189
description: Phosphorelay signal transduction system, and GGDEF domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4189_Phosphorelay_signal_transduction_system,_and_GGDEF_domain


id: CL:4190
description: Phosphorelay signal transduction system
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4190_Phosphorelay_signal_transduction_system


id: CL:4193
description: Phosphorelay signal transduction system, and EAL domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4193_Phosphorelay_signal_transduction_system,_and_EAL_domain


id: CL:4194
description: Mixed, incl. GGDEF domain, and Phosphoric diester hydrolase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4194_Mixed,_incl._GGDEF_domain,_and_Phosphoric_diester_hydrolase_activity


id: CL:4197
description: GGDEF domain, and Phosphoric diester hydrolase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4197_GGDEF_domain,_and_Phosphoric_diester_hydrolase_activity


id: CL:4200
description: PAS-associated, C-terminal, and EAL domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4200_PAS-associated,_C-terminal,_and_EAL_domain


id: CL:421
description: Acetolactate synthase activity, and 3-isopropylmalate dehydrogenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:421_Acetolactate_synthase_activity,_and_3-isopropylmalate_dehydrogenase_activity


id: CL:4225
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4225_Two-component_regulatory_system,_and_Signal_transduction_histidine_kinase-related_protein,_C-terminal

description:
  Two-component regulatory system, and Signal transduction histidine kinase-related protein, C-terminal


id: CL:4227
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4227_Signal_transduction_response_regulator,_C-terminal_effector,_and_Signal_transduction_histidine_kinase-related_protein,_C-terminal

description:
  Signal transduction response regulator, C-terminal effector, and Signal transduction histidine kinase-related protein, C-terminal


id: CL:4259
description: HD-GYP domain, and GGDEF domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4259_HD-GYP_domain,_and_GGDEF_domain


id: CL:4261
description: HD-GYP domain, and GGDEF domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4261_HD-GYP_domain,_and_GGDEF_domain


id: CL:4287
description: Sigma-54 interaction domain, ATP-binding site 2, and Sodium Bile acid symporter family
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4287_Sigma-54_interaction_domain,_ATP-binding_site_2,_and_Sodium_Bile_acid_symporter_family


id: CL:4291
description: Bacterial regulatory protein, Fis family, and Sodium/solute symporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4291_Bacterial_regulatory_protein,_Fis_family,_and_Sodium/solute_symporter


id: CL:4312
description: P-type potassium transmembrane transporter activity, and Ion channel
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4312_P-type_potassium_transmembrane_transporter_activity,_and_Ion_channel


id: CL:4330
description: Transcription regulator HTH, LysR, and DNA binding HTH domain, AraC-type
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4330_Transcription_regulator_HTH,_LysR,_and_DNA_binding_HTH_domain,_AraC-type


id: CL:4331
description: Transcription regulator HTH, LysR, and DNA binding HTH domain, AraC-type
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4331_Transcription_regulator_HTH,_LysR,_and_DNA_binding_HTH_domain,_AraC-type


id: CL:4333
description: Transcription regulator HTH, AraC- type, and Histidine kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4333_Transcription_regulator_HTH,_AraC-_type,_and_Histidine_kinase


id: CL:4334
description: Histidine kinase, and Transcription regulator HTH, AraC- type
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4334_Histidine_kinase,_and_Transcription_regulator_HTH,_AraC-_type


id: CL:4336
description: CdaR, GGDEF-like domain, and Histidine kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4336_CdaR,_GGDEF-like_domain,_and_Histidine_kinase


id: CL:4348
description: Histidine kinase, and CdaR, GGDEF-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4348_Histidine_kinase,_and_CdaR,_GGDEF-like_domain


id: CL:4360
description: AraC-type arabinose-binding/dimerisation domain, and HTH domain AraC-type, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4360_AraC-type_arabinose-binding/dimerisation_domain,_and_HTH_domain_AraC-type,_conserved_site


id: CL:4381
description: Transcription regulator HTH, LysR
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4381_Transcription_regulator_HTH,_LysR


id: CL:4384
description: Transcription regulator HTH, LysR
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4384_Transcription_regulator_HTH,_LysR


id: CL:4386
description: Transcription regulator HTH, LysR
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4386_Transcription_regulator_HTH,_LysR


id: CL:442
description: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain, and Glycerate kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:442_D-isomer_specific_2-hydroxyacid_dehydrogenase,_catalytic_domain,_and_Glycerate_kinase


id: CL:4423
description: Mixed, incl. AraC-like ligand binding domain, and Major facilitator superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4423_Mixed,_incl._AraC-like_ligand_binding_domain,_and_Major_facilitator_superfamily


id: CL:443
description: Mixed, incl. Glycerate kinase, and 3-hydroxyisobutyrate dehydrogenase-related
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:443_Mixed,_incl._Glycerate_kinase,_and_3-hydroxyisobutyrate_dehydrogenase-related


id: CL:4433
description: Mixed, incl. RNA polymerase sigma-70, and Proteolysis
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4433_Mixed,_incl._RNA_polymerase_sigma-70,_and_Proteolysis


id: CL:4443
description: Mixed, incl. Bacterial microcompartment, and NqrDE/RnfAE
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4443_Mixed,_incl._Bacterial_microcompartment,_and_NqrDE/RnfAE


id: CL:4444
description: Mixed, incl. Bacterial microcompartment, and Hsp70 protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4444_Mixed,_incl._Bacterial_microcompartment,_and_Hsp70_protein


id: CL:4477
description: NqrDE/RnfAE, and RnfC Barrel sandwich hybrid domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4477_NqrDE/RnfAE,_and_RnfC_Barrel_sandwich_hybrid_domain


id: CL:4494
description: Mixed, incl. Sulfur metabolism, and Nitrogen metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4494_Mixed,_incl._Sulfur_metabolism,_and_Nitrogen_metabolism


id: CL:4495
description: Mixed, incl. Sulfur metabolism, and Iron ion binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4495_Mixed,_incl._Sulfur_metabolism,_and_Iron_ion_binding


id: CL:4496
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4496_Sulfur_metabolism,_and_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen,_incorporation_of_two_atoms_of_oxygen

description:
  Sulfur metabolism, and Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen


id: CL:4501
description: NMT1/THI5 like, and Sulfur metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4501_NMT1/THI5_like,_and_Sulfur_metabolism


id: CL:4512
description: SsuA/THI5-like, and Sulfur metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4512_SsuA/THI5-like,_and_Sulfur_metabolism


id: CL:4539
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4539_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen,_incorporation_of_two_atoms_of_oxygen,_and_Putative_cyclase

description:
  Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen, and Putative cyclase


id: CL:4554
description: Mixed, incl. Electron transport, and Hemerythrin-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4554_Mixed,_incl._Electron_transport,_and_Hemerythrin-like


id: CL:4556
description: Electron transport, and Gas transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4556_Electron_transport,_and_Gas_transport


id: CL:4575
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4575_Mixed,_incl._Prismane,_alpha-bundle,_and_Oxidoreductase_activity,_acting_on_NAD(P)H,_oxygen_as_acceptor

description:
  Mixed, incl. Prismane, alpha-bundle, and Oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor


id: CL:4594
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4594_Mixed,_incl._Oxidoreductase_activity,_acting_on_iron-sulfur_proteins_as_donors,_and_ABC_transporter,_permease_protein,_BtuC-like

description:
  Mixed, incl. Oxidoreductase activity, acting on iron-sulfur proteins as donors, and ABC transporter, permease protein, BtuC-like


id: CL:4595
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4595_Mixed,_incl._Oxidoreductase_activity,_acting_on_iron-sulfur_proteins_as_donors,_and_ABC_transporter,_permease_protein,_BtuC-like

description:
  Mixed, incl. Oxidoreductase activity, acting on iron-sulfur proteins as donors, and ABC transporter, permease protein, BtuC-like


id: CL:4596
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4596_Mixed,_incl._Oxidoreductase_activity,_acting_on_iron-sulfur_proteins_as_donors,_and_ABC_transporter,_permease_protein,_BtuC-like

description:
  Mixed, incl. Oxidoreductase activity, acting on iron-sulfur proteins as donors, and ABC transporter, permease protein, BtuC-like


id: CL:4597
description: Mixed, incl. ABC transporter, permease protein, BtuC-like, and Periplasmic binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4597_Mixed,_incl._ABC_transporter,_permease_protein,_BtuC-like,_and_Periplasmic_binding_protein


id: CL:4599
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4599_Oxidoreductase_activity,_acting_on_iron-sulfur_proteins_as_donors,_and_ABC_transporter,_permease_protein,_BtuC-like

description:
  Oxidoreductase activity, acting on iron-sulfur proteins as donors, and ABC transporter, permease protein, BtuC-like


id: CL:4615
description: Heme transport, and ABC transporter, permease protein, BtuC-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4615_Heme_transport,_and_ABC_transporter,_permease_protein,_BtuC-like


id: CL:4626
description: Oxidoreductase activity, acting on iron-sulfur proteins as donors, and Prismane, alpha-bundle
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4626_Oxidoreductase_activity,_acting_on_iron-sulfur_proteins_as_donors,_and_Prismane,_alpha-bundle


id: CL:4628
description: Nitrogen fixation, and Dinitrogenase iron-molybdenum cofactor
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4628_Nitrogen_fixation,_and_Dinitrogenase_iron-molybdenum_cofactor


id: CL:4646
description: Nitrogen regulatory PII-like, alpha/beta, and Ammonia transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4646_Nitrogen_regulatory_PII-like,_alpha/beta,_and_Ammonia_transport


id: CL:466
description: Mixed, incl. 2-isopropylmalate synthase activity, and Phosphoglycerate dehydrogenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:466_Mixed,_incl._2-isopropylmalate_synthase_activity,_and_Phosphoglycerate_dehydrogenase_activity


id: CL:4666
description: Mixed, incl. Biotin and Thiamin Synthesis associated domain, and Iron hydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4666_Mixed,_incl._Biotin_and_Thiamin_Synthesis_associated_domain,_and_Iron_hydrogenase


id: CL:4669
description: Biotin and Thiamin Synthesis associated domain, and Iron hydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4669_Biotin_and_Thiamin_Synthesis_associated_domain,_and_Iron_hydrogenase


id: CL:4686
description: Mixed, incl. Latent infection - Other responses of Mtb to phagocytosis, and Amide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4686_Mixed,_incl._Latent_infection_-_Other_responses_of_Mtb_to_phagocytosis,_and_Amide_transport


id: CL:4687
description: Mixed, incl. Latent infection - Other responses of Mtb to phagocytosis, and Amide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4687_Mixed,_incl._Latent_infection_-_Other_responses_of_Mtb_to_phagocytosis,_and_Amide_transport


id: CL:4688
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4688_Mixed,_incl._Nickel_cation_transmembrane_transporter_activity,_and_Oligopeptide/dipeptide_ABC_transporter,_C-terminal

description:
  Mixed, incl. Nickel cation transmembrane transporter activity, and Oligopeptide/dipeptide ABC transporter, C-terminal


id: CL:4691
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4691_Nickel_cation_transmembrane_transporter_activity,_and_Oligopeptide/dipeptide_ABC_transporter,_C-terminal

description:
  Nickel cation transmembrane transporter activity, and Oligopeptide/dipeptide ABC transporter, C-terminal


id: CL:4692
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4692_Nickel_cation_transmembrane_transporter_activity,_and_Oligopeptide/dipeptide_ABC_transporter,_C-terminal

description:
  Nickel cation transmembrane transporter activity, and Oligopeptide/dipeptide ABC transporter, C-terminal


id: CL:4693
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4693_Oligopeptide/dipeptide_ABC_transporter,_C-terminal,_and_Nickel_cation_transmembrane_transporter_activity

description:
  Oligopeptide/dipeptide ABC transporter, C-terminal, and Nickel cation transmembrane transporter activity


id: CL:4694
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4694_Oligopeptide/dipeptide_ABC_transporter,_C-terminal,_and_Nickel_cation_transmembrane_transporter_activity

description:
  Oligopeptide/dipeptide ABC transporter, C-terminal, and Nickel cation transmembrane transporter activity


id: CL:4695
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4695_Oligopeptide/dipeptide_ABC_transporter,_C-terminal,_and_Nickel_cation_transmembrane_transporter_activity

description:
  Oligopeptide/dipeptide ABC transporter, C-terminal, and Nickel cation transmembrane transporter activity


id: CL:4696
description: Oligopeptide/dipeptide ABC transporter, C-terminal, and Solute-binding protein family 5
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4696_Oligopeptide/dipeptide_ABC_transporter,_C-terminal,_and_Solute-binding_protein_family_5


id: CL:4698
description: Peptide transmembrane transporter activity, and Oligopeptide/dipeptide ABC transporter, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4698_Peptide_transmembrane_transporter_activity,_and_Oligopeptide/dipeptide_ABC_transporter,_C-terminal


id: CL:4708
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4708_Oligopeptide/dipeptide_transporter,_C-terminal_region,_and_Nickel_cation_transmembrane_transporter_activity

description:
  Oligopeptide/dipeptide transporter, C-terminal region, and Nickel cation transmembrane transporter activity


id: CL:4717
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4717_Oligopeptide/dipeptide_transporter,_C-terminal_region,_and_N-terminal_TM_domain_of_oligopeptide_transport_permease_C

description:
  Oligopeptide/dipeptide transporter, C-terminal region, and N-terminal TM domain of oligopeptide transport permease C


id: CL:4726
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4726_Solute-binding_protein_family_5,_conserved_site,_and_Oligopeptide/dipeptide_ABC_transporter,_C-terminal

description:
  Solute-binding protein family 5, conserved site, and Oligopeptide/dipeptide ABC transporter, C-terminal


id: CL:4735
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4735_Solute-binding_protein_family_5,_conserved_site,_and_Oligopeptide/dipeptide_transporter,_C-terminal_region

description:
  Solute-binding protein family 5, conserved site, and Oligopeptide/dipeptide transporter, C-terminal region


id: CL:4744
description: Nickel cation transmembrane transporter activity, and Solute-binding protein family 5
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4744_Nickel_cation_transmembrane_transporter_activity,_and_Solute-binding_protein_family_5


id: CL:4755
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4755_Oligopeptide/dipeptide_transporter,_C-terminal_region,_and_N-terminal_TM_domain_of_oligopeptide_transport_permease_C

description:
  Oligopeptide/dipeptide transporter, C-terminal region, and N-terminal TM domain of oligopeptide transport permease C


id: CL:4777
description: Mixed, incl. Nitrogen fixation, and 4Fe-4S binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4777_Mixed,_incl._Nitrogen_fixation,_and_4Fe-4S_binding_domain


id: CL:478
description: Glycine radical, and Organic radical enzyme activase
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:478_Glycine_radical,_and_Organic_radical_enzyme_activase


id: CL:4791
description: Mixed, incl. ECF transporter, substrate-specific component, and Type 1 protein exporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4791_Mixed,_incl._ECF_transporter,_substrate-specific_component,_and_Type_1_protein_exporter


id: CL:4793
description: Mixed, incl. Type 1 protein exporter, and Methyltransferase TcmP-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4793_Mixed,_incl._Type_1_protein_exporter,_and_Methyltransferase_TcmP-like


id: CL:4796
description: Cobalt transport protein, and Type 1 protein exporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4796_Cobalt_transport_protein,_and_Type_1_protein_exporter


id: CL:480
description: Glycine radical, and Pyruvate formate-lyase 1 activating enzyme
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:480_Glycine_radical,_and_Pyruvate_formate-lyase_1_activating_enzyme


id: CL:4809
description: Methyltransferase TcmP-like, and Type 1 protein exporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4809_Methyltransferase_TcmP-like,_and_Type_1_protein_exporter


id: CL:4824
description: Mixed, incl. ECF transporter, substrate-specific component, and Vitamin transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4824_Mixed,_incl._ECF_transporter,_substrate-specific_component,_and_Vitamin_transport


id: CL:4828
description: ABC transporter, CbiO/EcfA subunit, and Cobalt transport protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4828_ABC_transporter,_CbiO/EcfA_subunit,_and_Cobalt_transport_protein


id: CL:4852
description: Mostly uncharacterized, incl. Type 1 protein exporter, and beta-Lactam resistance
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4852_Mostly_uncharacterized,_incl._Type_1_protein_exporter,_and_beta-Lactam_resistance


id: CL:4853
description: Mostly uncharacterized, incl. ABC-2 family transporter protein, and Major Facilitator Superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4853_Mostly_uncharacterized,_incl._ABC-2_family_transporter_protein,_and_Major_Facilitator_Superfamily


id: CL:4854
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4854_Mostly_uncharacterized,_incl._ABC-2_family_transporter_protein,_and_Protein_of_unknown_function_(DUF1048)

description:
  Mostly uncharacterized, incl. ABC-2 family transporter protein, and Protein of unknown function (DUF1048)


id: CL:4855
description: Mostly uncharacterized, incl. Protein of unknown function (DUF1048), and ABC-2 transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4855_Mostly_uncharacterized,_incl._Protein_of_unknown_function_(DUF1048),_and_ABC-2_transporter


id: CL:4856
description: Mostly uncharacterized, incl. AI-2E family transporter, and ABC-2 transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4856_Mostly_uncharacterized,_incl._AI-2E_family_transporter,_and_ABC-2_transporter


id: CL:4857
description: Mixed, incl. ABC-2 transporter, and Transcription regulator HTH, GntR
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4857_Mixed,_incl._ABC-2_transporter,_and_Transcription_regulator_HTH,_GntR


id: CL:4868
description: Mixed, incl. AI-2E family transporter, and Transcription regulator HTH, GntR
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4868_Mixed,_incl._AI-2E_family_transporter,_and_Transcription_regulator_HTH,_GntR


id: CL:4877
description: Mixed, incl. Protein of unknown function (DUF1048), and DNA alkylation repair enzyme
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4877_Mixed,_incl._Protein_of_unknown_function_(DUF1048),_and_DNA_alkylation_repair_enzyme


id: CL:4878
description: Mixed, incl. DNA alkylation repair enzyme, and ubiE/COQ5 methyltransferase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4878_Mixed,_incl._DNA_alkylation_repair_enzyme,_and_ubiE/COQ5_methyltransferase_family


id: CL:4887
description: Protein of unknown function (DUF1048), and ABC-2 transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4887_Protein_of_unknown_function_(DUF1048),_and_ABC-2_transporter


id: CL:4896
description: Phage infection protein, YhgE, C-terminal, and Collagen binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4896_Phage_infection_protein,_YhgE,_C-terminal,_and_Collagen_binding


id: CL:4905
description: Mixed, incl. Major Facilitator Superfamily, and Quinone metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4905_Mixed,_incl._Major_Facilitator_Superfamily,_and_Quinone_metabolic_process


id: CL:4906
description: Mixed, incl. Quinone metabolic process, and Sulfite exporter TauE/SafE
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4906_Mixed,_incl._Quinone_metabolic_process,_and_Sulfite_exporter_TauE/SafE


id: CL:4915
description: Major Facilitator Superfamily, and Tetracyclin repressor-like, C-terminal domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4915_Major_Facilitator_Superfamily,_and_Tetracyclin_repressor-like,_C-terminal_domain_superfamily


id: CL:4925
description: Mixed, incl. Type 1 protein exporter, and Transcriptional regulator C-terminal region
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4925_Mixed,_incl._Type_1_protein_exporter,_and_Transcriptional_regulator_C-terminal_region


id: CL:4927
description: Type 1 protein exporter, and Vitamin B6 biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4927_Type_1_protein_exporter,_and_Vitamin_B6_biosynthetic_process


id: CL:4929
description: Vitamin B6 biosynthetic process, and Type 1 protein exporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4929_Vitamin_B6_biosynthetic_process,_and_Type_1_protein_exporter


id: CL:4961
description: ABC transporters, and HlyD family secretion protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4961_ABC_transporters,_and_HlyD_family_secretion_protein


id: CL:4962
description: ABC transporters, and HlyD family secretion protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4962_ABC_transporters,_and_HlyD_family_secretion_protein


id: CL:4963
description: Mixed, incl. FtsX-like permease family, and MacB, ATP-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4963_Mixed,_incl._FtsX-like_permease_family,_and_MacB,_ATP-binding_domain


id: CL:4964
description: Mixed, incl. FtsX-like permease family, and MacB, ATP-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4964_Mixed,_incl._FtsX-like_permease_family,_and_MacB,_ATP-binding_domain


id: CL:4965
description: Mixed, incl. MacB, ATP-binding domain, and FtsX-like permease family
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4965_Mixed,_incl._MacB,_ATP-binding_domain,_and_FtsX-like_permease_family


id: CL:4967
description: Mixed, incl. HlyD family secretion protein, and MacB, ATP-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4967_Mixed,_incl._HlyD_family_secretion_protein,_and_MacB,_ATP-binding_domain


id: CL:4969
description: Membrane fusion protein, biotin-lipoyl like domain, and MacB-like periplasmic core domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:4969_Membrane_fusion_protein,_biotin-lipoyl_like_domain,_and_MacB-like_periplasmic_core_domain


id: CL:5000
description: Membrane component of ABC transporter, predicted, and MacB, ATP-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5000_Membrane_component_of_ABC_transporter,_predicted,_and_MacB,_ATP-binding_domain


id: CL:5018
description: Mixed, incl. FtsX-like permease family, and ABC transporter, lipoprotein release, LolD-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5018_Mixed,_incl._FtsX-like_permease_family,_and_ABC_transporter,_lipoprotein_release,_LolD-like


id: CL:5020
description: MacB-like periplasmic core domain, and Membrane iron-sulfur containing protein FtrD-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5020_MacB-like_periplasmic_core_domain,_and_Membrane_iron-sulfur_containing_protein_FtrD-like


id: CL:5038
description: Mixed, incl. Polyamine transport, and Sulfate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5038_Mixed,_incl._Polyamine_transport,_and_Sulfate_transport


id: CL:5039
description: Mixed, incl. Polyamine transport, and Ferric binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5039_Mixed,_incl._Polyamine_transport,_and_Ferric_binding_protein


id: CL:5040
description: Mixed, incl. Polyamine transport, and Ferric binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5040_Mixed,_incl._Polyamine_transport,_and_Ferric_binding_protein


id: CL:5053
description: Mixed, incl. Ferric binding protein, and TOBE domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5053_Mixed,_incl._Ferric_binding_protein,_and_TOBE_domain


id: CL:5062
description: Sulfate transport, and Sulfate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5062_Sulfate_transport,_and_Sulfate_transport


id: CL:5076
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5076_Mixed,_incl._Amino_acid_ABC_transporter,_permease_protein,_3-TM_domain,_and_Bacterial_periplasmic_substrate-binding_proteins

description:
  Mixed, incl. Amino acid ABC transporter, permease protein, 3-TM domain, and Bacterial periplasmic substrate-binding proteins


id: CL:5077
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5077_Amino_acid_ABC_transporter,_permease_protein,_3-TM_domain,_and_Bacterial_periplasmic_substrate-binding_proteins

description:
  Amino acid ABC transporter, permease protein, 3-TM domain, and Bacterial periplasmic substrate-binding proteins


id: CL:5078
description: Amino acid ABC transporter, permease protein, 3-TM domain, and Ligand-gated channel activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5078_Amino_acid_ABC_transporter,_permease_protein,_3-TM_domain,_and_Ligand-gated_channel_activity


id: CL:5080
description: Amino acid ABC transporter, permease protein, 3-TM domain, and Ligand-gated channel activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5080_Amino_acid_ABC_transporter,_permease_protein,_3-TM_domain,_and_Ligand-gated_channel_activity


id: CL:5105
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5105_Bacterial_periplasmic_substrate-binding_proteins,_and_Amino_acid_ABC_transporter,_permease_protein,_3-TM_domain

description:
  Bacterial periplasmic substrate-binding proteins, and Amino acid ABC transporter, permease protein, 3-TM domain


id: CL:511
description: Carbohydrate metabolic process, and Alcohol dehydrogenase-like, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:511_Carbohydrate_metabolic_process,_and_Alcohol_dehydrogenase-like,_C-terminal


id: CL:5115
description: EamA-like transporter family, and AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5115_EamA-like_transporter_family,_and_AAA_domain


id: CL:513
description: Mixed, incl. Pentose phosphate pathway, and Glycolysis / Gluconeogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:513_Mixed,_incl._Pentose_phosphate_pathway,_and_Glycolysis_/_Gluconeogenesis


id: CL:5132
description: Mixed, incl. DTXR-type HTH domain, and ABC transporter, TroCD-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5132_Mixed,_incl._DTXR-type_HTH_domain,_and_ABC_transporter,_TroCD-like


id: CL:5134
description: Mixed, incl. DTXR-type HTH domain, and ABC transporter, TroCD-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5134_Mixed,_incl._DTXR-type_HTH_domain,_and_ABC_transporter,_TroCD-like


id: CL:5137
description: Mixed, incl. DTXR-type HTH domain, and ABC transporter, TroCD-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5137_Mixed,_incl._DTXR-type_HTH_domain,_and_ABC_transporter,_TroCD-like


id: CL:514
description: Mixed, incl. Pentose phosphate pathway, and Glycolytic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:514_Mixed,_incl._Pentose_phosphate_pathway,_and_Glycolytic_process


id: CL:5140
description: ABC transporter, TroCD-like, and Adhesin B
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5140_ABC_transporter,_TroCD-like,_and_Adhesin_B


id: CL:5141
description: Adhesin B, and ABC transporter, TroCD-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5141_Adhesin_B,_and_ABC_transporter,_TroCD-like


id: CL:515
description: Mixed, incl. Pentose phosphate pathway, and Glycolytic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:515_Mixed,_incl._Pentose_phosphate_pathway,_and_Glycolytic_process


id: CL:5152
description: ABC transporter, TroCD-like, and Adhesin B
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5152_ABC_transporter,_TroCD-like,_and_Adhesin_B


id: CL:516
description: Mixed, incl. Pentose phosphate pathway, and Glycolytic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:516_Mixed,_incl._Pentose_phosphate_pathway,_and_Glycolytic_process


id: CL:517
description: Pentose phosphate pathway, and Glycolytic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:517_Pentose_phosphate_pathway,_and_Glycolytic_process


id: CL:518
description: Pentose phosphate pathway, and Glycolytic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:518_Pentose_phosphate_pathway,_and_Glycolytic_process


id: CL:5198
description: Mixed, incl. Pfam phage integrase family, and Domain of unknown function DUF3850
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5198_Mixed,_incl._Pfam_phage_integrase_family,_and_Domain_of_unknown_function_DUF3850


id: CL:5199
description: Mixed, incl. Pfam phage integrase family, and Domain of unknown function DUF3850
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5199_Mixed,_incl._Pfam_phage_integrase_family,_and_Domain_of_unknown_function_DUF3850


id: CL:520
description: Glycolytic process, and Pentose phosphate pathway
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:520_Glycolytic_process,_and_Pentose_phosphate_pathway


id: CL:5201
description: Mixed, incl. Pfam phage integrase family, and Regulation of RNA stability
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5201_Mixed,_incl._Pfam_phage_integrase_family,_and_Regulation_of_RNA_stability


id: CL:5203
description: Core-binding (CB) domain, and Regulation of RNA stability
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5203_Core-binding_(CB)_domain,_and_Regulation_of_RNA_stability


id: CL:522
description: Glycolysis, and Pentose phosphate pathway
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:522_Glycolysis,_and_Pentose_phosphate_pathway


id: CL:5233
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5233_Mixed,_incl._Domain_of_unknown_function_DUF3850,_and_DNA_methylase,_C-5_cytosine-specific,_active_site

description:
  Mixed, incl. Domain of unknown function DUF3850, and DNA methylase, C-5 cytosine-specific, active site


id: CL:5246
description: Mostly uncharacterized, incl. Putative cyclase, and Flavodoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5246_Mostly_uncharacterized,_incl._Putative_cyclase,_and_Flavodoxin


id: CL:5248
description: Mixed, incl. Flavodoxin, and Asparagine synthase
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5248_Mixed,_incl._Flavodoxin,_and_Asparagine_synthase


id: CL:525
description: Glycolysis, and Fructose-bisphosphate aldolase class-II
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:525_Glycolysis,_and_Fructose-bisphosphate_aldolase_class-II


id: CL:526
description: Glycolysis, and NADPH regeneration
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:526_Glycolysis,_and_NADPH_regeneration


id: CL:5260
description: Mixed, incl. Putative cyclase, and RpiR-like, SIS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5260_Mixed,_incl._Putative_cyclase,_and_RpiR-like,_SIS_domain


id: CL:5271
description: ABC transporters, and Periplasmic binding protein-like I
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5271_ABC_transporters,_and_Periplasmic_binding_protein-like_I


id: CL:5272
description: ABC transporters, and Helix_turn _helix lactose operon repressor
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5272_ABC_transporters,_and_Helix_turn__helix_lactose_operon_repressor


id: CL:5274
description: Mixed, incl. Carbohydrate transport, and ABC transporter, permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5274_Mixed,_incl._Carbohydrate_transport,_and_ABC_transporter,_permease


id: CL:5275
description: Mixed, incl. Carbohydrate transport, and ABC transporter, permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5275_Mixed,_incl._Carbohydrate_transport,_and_ABC_transporter,_permease


id: CL:5276
description: Mixed, incl. Carbohydrate transport, and ABC transporter, permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5276_Mixed,_incl._Carbohydrate_transport,_and_ABC_transporter,_permease


id: CL:5277
description: Carbohydrate transport, and ABC transporter, permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5277_Carbohydrate_transport,_and_ABC_transporter,_permease


id: CL:5278
description: Carbohydrate transport, and ABC transporter, permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5278_Carbohydrate_transport,_and_ABC_transporter,_permease


id: CL:5279
description: Carbohydrate transport, and ABC transporter, permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5279_Carbohydrate_transport,_and_ABC_transporter,_permease


id: CL:5282
description: Periplasmic binding protein domain, and ABC transporter, permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5282_Periplasmic_binding_protein_domain,_and_ABC_transporter,_permease


id: CL:5283
description: Periplasmic binding protein domain, and ABC transporter, permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5283_Periplasmic_binding_protein_domain,_and_ABC_transporter,_permease


id: CL:5294
description: Periplasmic binding protein domain, and Carbohydrate transmembrane transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5294_Periplasmic_binding_protein_domain,_and_Carbohydrate_transmembrane_transport


id: CL:5312
description: D-ribose catabolic process, and Periplasmic binding protein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5312_D-ribose_catabolic_process,_and_Periplasmic_binding_protein_domain


id: CL:5322
description: Mixed, incl. D-xylose metabolic process, and Sucrose-6F-phosphate phosphohydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5322_Mixed,_incl._D-xylose_metabolic_process,_and_Sucrose-6F-phosphate_phosphohydrolase


id: CL:5333
description: Mixed, incl. Aldolase FbaB-like, archaeal-type, and Cupin 2, conserved barrel
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5333_Mixed,_incl._Aldolase_FbaB-like,_archaeal-type,_and_Cupin_2,_conserved_barrel


id: CL:535
description: Glycolysis, and Fructose-bisphosphate aldolase class-II
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:535_Glycolysis,_and_Fructose-bisphosphate_aldolase_class-II


id: CL:5350
description: Mixed, incl. D-ribose catabolic process, and YhcH/YjgK/YiaL
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5350_Mixed,_incl._D-ribose_catabolic_process,_and_YhcH/YjgK/YiaL


id: CL:5361
description: Helix_turn _helix lactose operon repressor, and Import into cell
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5361_Helix_turn__helix_lactose_operon_repressor,_and_Import_into_cell


id: CL:5364
description: Import into cell, and Helix_turn _helix lactose operon repressor
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5364_Import_into_cell,_and_Helix_turn__helix_lactose_operon_repressor


id: CL:5387
description: Mixed, incl. ABC transporter substrate-binding protein PnrA-like, and ABC transporter, permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5387_Mixed,_incl._ABC_transporter_substrate-binding_protein_PnrA-like,_and_ABC_transporter,_permease


id: CL:5389
description: ABC transporter substrate-binding protein PnrA-like, and ABC transporter, permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5389_ABC_transporter_substrate-binding_protein_PnrA-like,_and_ABC_transporter,_permease


id: CL:5411
description: Mixed, incl. Isochorismatase-like, and Phospholipid methyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5411_Mixed,_incl._Isochorismatase-like,_and_Phospholipid_methyltransferase


id: CL:5424
description: MetI-like superfamily, and Bacterial extracellular solute-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5424_MetI-like_superfamily,_and_Bacterial_extracellular_solute-binding_protein


id: CL:5425
description: MetI-like superfamily, and Bacterial extracellular solute-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5425_MetI-like_superfamily,_and_Bacterial_extracellular_solute-binding_protein


id: CL:5426
description: MetI-like superfamily, and Bacterial extracellular solute-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5426_MetI-like_superfamily,_and_Bacterial_extracellular_solute-binding_protein


id: CL:5428
description: Bacterial extracellular solute-binding protein, and ABC-type maltose transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5428_Bacterial_extracellular_solute-binding_protein,_and_ABC-type_maltose_transporter_activity


id: CL:5430
description: Bacterial extracellular solute-binding protein, and ABC-type maltose transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5430_Bacterial_extracellular_solute-binding_protein,_and_ABC-type_maltose_transporter_activity


id: CL:5432
description: Bacterial extracellular solute-binding protein, and ABC-type maltose transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5432_Bacterial_extracellular_solute-binding_protein,_and_ABC-type_maltose_transporter_activity


id: CL:5434
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5434_Mixed,_incl._Regulation_of_nitrogen_utilization,_and_ATP-binding_cassette_(ABC)_transporter_complex,_substrate-binding_subunit-containing

description:
  Mixed, incl. Regulation of nitrogen utilization, and ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing


id: CL:5437
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5437_ATP-binding_cassette_(ABC)_transporter_complex,_substrate-binding_subunit-containing,_and_Bacterial_extracellular_solute-binding_protein

description:
  ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing, and Bacterial extracellular solute-binding protein


id: CL:5464
description: ABC-type maltose transporter activity, and Bacterial extracellular solute-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5464_ABC-type_maltose_transporter_activity,_and_Bacterial_extracellular_solute-binding_protein


id: CL:547
description: Thiamin diphosphate-binding fold, and Cobalt
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:547_Thiamin_diphosphate-binding_fold,_and_Cobalt


id: CL:5504
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5504_Mixed,_incl._Transcriptional_regulator_LacI/GalR-like,_sensor_domain,_and_ABC-type_maltose_transporter_activity

description:
  Mixed, incl. Transcriptional regulator LacI/GalR-like, sensor domain, and ABC-type maltose transporter activity


id: CL:5513
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5513_Mixed,_incl._Regulation_of_nitrogen_utilization,_and_Transcriptional_regulator_LacI/GalR-like,_sensor_domain

description:
  Mixed, incl. Regulation of nitrogen utilization, and Transcriptional regulator LacI/GalR-like, sensor domain


id: CL:5524
description: Mixed, incl. Nucleoplasm, and Terpene metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5524_Mixed,_incl._Nucleoplasm,_and_Terpene_metabolic_process


id: CL:5543
description: Mixed, incl. ABC transporter, permease, and Periplasmic binding protein-like I
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5543_Mixed,_incl._ABC_transporter,_permease,_and_Periplasmic_binding_protein-like_I


id: CL:5544
description: Mixed, incl. Branched-chain amino acid transport, and Leucine-binding protein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5544_Mixed,_incl._Branched-chain_amino_acid_transport,_and_Leucine-binding_protein_domain


id: CL:5547
description: Mixed, incl. Branched-chain amino acid transport, and Leucine-binding protein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5547_Mixed,_incl._Branched-chain_amino_acid_transport,_and_Leucine-binding_protein_domain


id: CL:5548
description: Mixed, incl. Branched-chain amino acid transport, and Leu/Ile/Val-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5548_Mixed,_incl._Branched-chain_amino_acid_transport,_and_Leu/Ile/Val-binding_protein


id: CL:5549
description: Mixed, incl. Branched-chain amino acid transport, and Leu/Ile/Val-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5549_Mixed,_incl._Branched-chain_amino_acid_transport,_and_Leu/Ile/Val-binding_protein


id: CL:5560
description: Branched-chain amino acid transport, and Leu/Ile/Val-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5560_Branched-chain_amino_acid_transport,_and_Leu/Ile/Val-binding_protein


id: CL:5569
description: Branched-chain amino acid transport, and Leucine-binding protein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5569_Branched-chain_amino_acid_transport,_and_Leucine-binding_protein_domain


id: CL:5582
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5582_Mixed,_incl._Putative_inner_membrane_exporter,_YdcZ,_and_Cyclic_nucleotide-monophosphate_binding_domain

description:
  Mixed, incl. Putative inner membrane exporter, YdcZ, and Cyclic nucleotide-monophosphate binding domain


id: CL:5595
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5595_Mixed,_incl._ABC_transporter_substrate_binding_protein,_and_ABC_transporter,_lipoprotein_release,_LolD-like

description:
  Mixed, incl. ABC transporter substrate binding protein, and ABC transporter, lipoprotein release, LolD-like


id: CL:5611
description: Mixed, incl. Organic acid catabolic process, and Amino acid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5611_Mixed,_incl._Organic_acid_catabolic_process,_and_Amino_acid_transport


id: CL:5612
description: Mixed, incl. Organic acid catabolic process, and Amino acid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5612_Mixed,_incl._Organic_acid_catabolic_process,_and_Amino_acid_transport


id: CL:5613
description: Mixed, incl. Cellular amino acid catabolic process, and Solute:sodium symporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5613_Mixed,_incl._Cellular_amino_acid_catabolic_process,_and_Solute:sodium_symporter_activity


id: CL:5614
description: Mixed, incl. Cellular amino acid catabolic process, and Solute:sodium symporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5614_Mixed,_incl._Cellular_amino_acid_catabolic_process,_and_Solute:sodium_symporter_activity


id: CL:5616
description: Mixed, incl. Cellular amino acid catabolic process, and HutD
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5616_Mixed,_incl._Cellular_amino_acid_catabolic_process,_and_HutD


id: CL:5617
description: Mixed, incl. 4-hydroxyproline metabolic process, and Opine dehydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5617_Mixed,_incl._4-hydroxyproline_metabolic_process,_and_Opine_dehydrogenase


id: CL:5618
description: Mixed, incl. 4-hydroxyproline metabolic process, and C-terminal binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5618_Mixed,_incl._4-hydroxyproline_metabolic_process,_and_C-terminal_binding_protein


id: CL:5619
description: Mixed, incl. 4-hydroxyproline metabolic process, and HutD
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5619_Mixed,_incl._4-hydroxyproline_metabolic_process,_and_HutD


id: CL:5621
description: 4-hydroxyproline metabolic process, and C-terminal binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5621_4-hydroxyproline_metabolic_process,_and_C-terminal_binding_protein


id: CL:5640
description: Mixed, incl. 4-hydroxyproline metabolic process, and C-terminal binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5640_Mixed,_incl._4-hydroxyproline_metabolic_process,_and_C-terminal_binding_protein


id: CL:5652
description: Opine dehydrogenase, and Propionate metabolic process, methylcitrate cycle
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5652_Opine_dehydrogenase,_and_Propionate_metabolic_process,_methylcitrate_cycle


id: CL:5662
description: Mixed, incl. Formate metabolic process, and Orc1-like, AAA ATPase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5662_Mixed,_incl._Formate_metabolic_process,_and_Orc1-like,_AAA_ATPase_domain


id: CL:5665
description: Mixed, incl. Orc1-like, AAA ATPase domain, and Cytidylyltransferase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5665_Mixed,_incl._Orc1-like,_AAA_ATPase_domain,_and_Cytidylyltransferase-like


id: CL:5698
description: Mixed, incl. Alanine transport, and Phospholipase C/D
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5698_Mixed,_incl._Alanine_transport,_and_Phospholipase_C/D


id: CL:5700
description: Alanine transport, and Sodium/solute symporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5700_Alanine_transport,_and_Sodium/solute_symporter


id: CL:5725
description: Mixed, incl. ATPase regulator activity, and Na+-H+ antiporter family
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5725_Mixed,_incl._ATPase_regulator_activity,_and_Na+-H+_antiporter_family


id: CL:5734
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5734_Mixed,_incl._Metal-dependent_hydrolase,_composite_domain_superfamily,_and_Folic_acid_catabolic_process

description:
  Mixed, incl. Metal-dependent hydrolase, composite domain superfamily, and Folic acid catabolic process


id: CL:5735
description: Mixed, incl. Copper, and AzlC protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5735_Mixed,_incl._Copper,_and_AzlC_protein


id: CL:5736
description: Mixed, incl. N-acetylglucosamine metabolic process, and Sphingolipid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5736_Mixed,_incl._N-acetylglucosamine_metabolic_process,_and_Sphingolipid_metabolism


id: CL:5740
description: Mixed, incl. N-acetylglucosamine metabolic process, and Sodium/solute symporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5740_Mixed,_incl._N-acetylglucosamine_metabolic_process,_and_Sodium/solute_symporter


id: CL:5758
description: AzlC protein, and Branched-chain amino acid transport, AzlD
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5758_AzlC_protein,_and_Branched-chain_amino_acid_transport,_AzlD


id: CL:5772
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5772_Mixed,_incl._Folic_acid_catabolic_process,_and_Metal-dependent_hydrolase,_composite_domain_superfamily

description:
  Mixed, incl. Folic acid catabolic process, and Metal-dependent hydrolase, composite domain superfamily


id: CL:5773
description: Mixed, incl. Amidohydrolase family, and Endoribonuclease L-PSP/chorismate mutase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5773_Mixed,_incl._Amidohydrolase_family,_and_Endoribonuclease_L-PSP/chorismate_mutase-like


id: CL:5775
description: Endoribonuclease L-PSP/chorismate mutase-like, and Amidohydrolase 3
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5775_Endoribonuclease_L-PSP/chorismate_mutase-like,_and_Amidohydrolase_3


id: CL:5787
description: Mixed, incl. Amidohydrolase 3, and PucR C-terminal helix-turn-helix domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5787_Mixed,_incl._Amidohydrolase_3,_and_PucR_C-terminal_helix-turn-helix_domain


id: CL:5798
description: Mixed, incl. Uroporphyrinogen decarboxylase (URO-D), and Folic acid catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5798_Mixed,_incl._Uroporphyrinogen_decarboxylase_(URO-D),_and_Folic_acid_catabolic_process


id: CL:5809
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5809_Mixed,_incl._Sodium/glutamate_symporter,_and_TRAP_C4-dicarboxylate_transport_system_permease_DctM_subunit

description:
  Mixed, incl. Sodium/glutamate symporter, and TRAP C4-dicarboxylate transport system permease DctM subunit


id: CL:5810
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5810_Mixed,_incl._Sodium/glutamate_symporter,_and_TRAP_C4-dicarboxylate_transport_system_permease_DctM_subunit

description:
  Mixed, incl. Sodium/glutamate symporter, and TRAP C4-dicarboxylate transport system permease DctM subunit


id: CL:5812
description: Mixed, incl. TRAP C4-dicarboxylate transport system permease DctM subunit, and Symport
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5812_Mixed,_incl._TRAP_C4-dicarboxylate_transport_system_permease_DctM_subunit,_and_Symport


id: CL:5815
description: Mixed, incl. Beta-lactamase enzyme family, and Na+/H+ antiporter, NhaC-like, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5815_Mixed,_incl._Beta-lactamase_enzyme_family,_and_Na+/H+_antiporter,_NhaC-like,_C-terminal


id: CL:5847
description: Mixed, incl. Alanine metabolic process, and NlpC/P60 family
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5847_Mixed,_incl._Alanine_metabolic_process,_and_NlpC/P60_family


id: CL:5849
description: Alanine metabolic process, and NlpC/P60 family
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5849_Alanine_metabolic_process,_and_NlpC/P60_family


id: CL:5870
description: Mixed, incl. Fermentation, and Two-component system
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5870_Mixed,_incl._Fermentation,_and_Two-component_system


id: CL:5871
description: Mixed, incl. Transcription regulator HTH, GntR, and Two-component system
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5871_Mixed,_incl._Transcription_regulator_HTH,_GntR,_and_Two-component_system


id: CL:5872
description: Mostly uncharacterized, incl. GntR, C-terminal, and Receptor
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5872_Mostly_uncharacterized,_incl._GntR,_C-terminal,_and_Receptor


id: CL:5873
description: Mostly uncharacterized, incl. Receptor, and TRAP transporter large membrane protein DctM
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5873_Mostly_uncharacterized,_incl._Receptor,_and_TRAP_transporter_large_membrane_protein_DctM


id: CL:5874
description: Mostly uncharacterized, incl. Aldolase/RraA, and Citrate transporter-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5874_Mostly_uncharacterized,_incl._Aldolase/RraA,_and_Citrate_transporter-like_domain


id: CL:5875
description: Mixed, incl. Aldolase/RraA, and TRAP transporter large membrane protein DctM
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5875_Mixed,_incl._Aldolase/RraA,_and_TRAP_transporter_large_membrane_protein_DctM


id: CL:5876
description: Mixed, incl. Citrate transport, and Protein of unknown function DUF6282
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5876_Mixed,_incl._Citrate_transport,_and_Protein_of_unknown_function_DUF6282


id: CL:589
description: Mixed, incl. Phosphoglucosamine mutase activity, and N-acetylglucosamine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:589_Mixed,_incl._Phosphoglucosamine_mutase_activity,_and_N-acetylglucosamine_metabolic_process


id: CL:5890
description: Mixed, incl. Aldolase/RraA, and Deacetylase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5890_Mixed,_incl._Aldolase/RraA,_and_Deacetylase_activity


id: CL:5900
description: Mostly uncharacterized, incl. PdxA family, and YhcH/YjgK/YiaL
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5900_Mostly_uncharacterized,_incl._PdxA_family,_and_YhcH/YjgK/YiaL


id: CL:5903
description: Mixed, incl. PdxA family, and Sialidase
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5903_Mixed,_incl._PdxA_family,_and_Sialidase


id: CL:5924
description: Mixed, incl. Receptor, and Tripartite tricarboxylate transporter TctA family
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5924_Mixed,_incl._Receptor,_and_Tripartite_tricarboxylate_transporter_TctA_family


id: CL:5926
description: Receptor, and C4-dicarboxylate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5926_Receptor,_and_C4-dicarboxylate_transport


id: CL:5950
description: Mixed, incl. GntR, C-terminal, and Transcription regulator IclR, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5950_Mixed,_incl._GntR,_C-terminal,_and_Transcription_regulator_IclR,_C-terminal


id: CL:5951
description: Mixed, incl. Transcription regulator IclR, C-terminal, and NRAMP family
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5951_Mixed,_incl._Transcription_regulator_IclR,_C-terminal,_and_NRAMP_family


id: CL:5953
description: Mixed, incl. Cyclophilin-like domain superfamily, and Transcription regulator IclR, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5953_Mixed,_incl._Cyclophilin-like_domain_superfamily,_and_Transcription_regulator_IclR,_C-terminal


id: CL:5957
description: Cyclophilin-like domain superfamily, and NRAMP family
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5957_Cyclophilin-like_domain_superfamily,_and_NRAMP_family


id: CL:5983
description: GntR, C-terminal, and UbiC transcription regulator-associated
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5983_GntR,_C-terminal,_and_UbiC_transcription_regulator-associated


id: CL:5995
description: UbiC transcription regulator-associated, and Fluorobenzoate degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:5995_UbiC_transcription_regulator-associated,_and_Fluorobenzoate_degradation


id: CL:6010
description: Mixed, incl. acetyl-CoA metabolic process, and Citrate lyase ligase
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:6010_Mixed,_incl._acetyl-CoA_metabolic_process,_and_Citrate_lyase_ligase


id: CL:6011
description: Mixed, incl. acetyl-CoA metabolic process, and Citrate lyase ligase
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:6011_Mixed,_incl._acetyl-CoA_metabolic_process,_and_Citrate_lyase_ligase


id: CL:6022
description: acetyl-CoA metabolic process, and Citrate lyase ligase
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:6022_acetyl-CoA_metabolic_process,_and_Citrate_lyase_ligase


id: CL:6033
description: Mixed, incl. Fermentation, and Alkaloid catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:6033_Mixed,_incl._Fermentation,_and_Alkaloid_catabolic_process


id: CL:6036
description: Fermentation, and CoA enzyme activase uncharacterised domain (DUF2229)
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:6036_Fermentation,_and_CoA_enzyme_activase_uncharacterised_domain_(DUF2229)


id: CL:6070
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:6070_Mixed,_incl._CoA_enzyme_activase_uncharacterised_domain_(DUF2229),_and_Calcineurin-like_phosphoesterase_superfamily_domain

description:
  Mixed, incl. CoA enzyme activase uncharacterised domain (DUF2229), and Calcineurin-like phosphoesterase superfamily domain


id: CL:6087
description: Mixed, incl. Alkaloid catabolic process, and Purine nucleobase catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:6087_Mixed,_incl._Alkaloid_catabolic_process,_and_Purine_nucleobase_catabolic_process


id: CL:609
description: Nucleoside catabolic process, and Deoxyribonucleotide catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:609_Nucleoside_catabolic_process,_and_Deoxyribonucleotide_catabolic_process


id: CL:6103
description: Mixed, incl. Xenobiotic transport, and Biosynthesis of siderophore group nonribosomal peptides
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:6103_Mixed,_incl._Xenobiotic_transport,_and_Biosynthesis_of_siderophore_group_nonribosomal_peptides


id: CL:6104
description: Mixed, incl. Xenobiotic transport, and Biosynthesis of siderophore group nonribosomal peptides
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:6104_Mixed,_incl._Xenobiotic_transport,_and_Biosynthesis_of_siderophore_group_nonribosomal_peptides


id: CL:6106
description: Mixed, incl. Xenobiotic transport, and Biosynthesis of siderophore group nonribosomal peptides
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:6106_Mixed,_incl._Xenobiotic_transport,_and_Biosynthesis_of_siderophore_group_nonribosomal_peptides


id: CL:6107
description: Mixed, incl. Xenobiotic transport, and Flavodoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:6107_Mixed,_incl._Xenobiotic_transport,_and_Flavodoxin


id: CL:6137
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:6137_Biosynthesis_of_siderophore_group_nonribosomal_peptides,_and_NADH:flavin_oxidoreductase_/_NADH_oxidase_family

description:
  Biosynthesis of siderophore group nonribosomal peptides, and NADH:flavin oxidoreductase / NADH oxidase family


id: CL:6149
description: Mixed, incl. Nickel, and Suppression of autophagy
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:6149_Mixed,_incl._Nickel,_and_Suppression_of_autophagy


id: CL:6165
description: Mixed, incl. Membrane transport protein, and L,D-transpeptidase catalytic domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:6165_Mixed,_incl._Membrane_transport_protein,_and_L,D-transpeptidase_catalytic_domain


id: CL:6166
description: Mixed, incl. L,D-transpeptidase catalytic domain, and Bacterial Ig-like domain, group 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:6166_Mixed,_incl._L,D-transpeptidase_catalytic_domain,_and_Bacterial_Ig-like_domain,_group_2


id: CL:6177
description: Mixed, incl. Sodium Bile acid symporter family, and Inorganic H+ pyrophosphatase
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:6177_Mixed,_incl._Sodium_Bile_acid_symporter_family,_and_Inorganic_H+_pyrophosphatase


id: CL:6186
description: Mixed, incl. DNA metabolic process, and Ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:6186_Mixed,_incl._DNA_metabolic_process,_and_Ion_transport


id: CL:6187
description: Mixed, incl. DNA metabolic process, and Transition metal ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:6187_Mixed,_incl._DNA_metabolic_process,_and_Transition_metal_ion_transport


id: CL:6188
description: Mixed, incl. DNA metabolic process, and Antirestriction
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:6188_Mixed,_incl._DNA_metabolic_process,_and_Antirestriction


id: CL:6189
description: Mixed, incl. DNA metabolic process, and Antirestriction
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:6189_Mixed,_incl._DNA_metabolic_process,_and_Antirestriction


id: CL:6191
description: Mostly uncharacterized, incl. DNA strand exchange activity, and C-5 methylation of cytosine
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:6191_Mostly_uncharacterized,_incl._DNA_strand_exchange_activity,_and_C-5_methylation_of_cytosine


id: CL:6193
description: Mostly uncharacterized, incl. DNA-binding recombinase domain, and C-5 methylation of cytosine
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:6193_Mostly_uncharacterized,_incl._DNA-binding_recombinase_domain,_and_C-5_methylation_of_cytosine


id: CL:6194
description: Mostly uncharacterized, incl. DNA-binding recombinase domain, and C-5 methylation of cytosine
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:6194_Mostly_uncharacterized,_incl._DNA-binding_recombinase_domain,_and_C-5_methylation_of_cytosine


id: CL:6195
description: Mostly uncharacterized, incl. DNA-binding recombinase domain, and Antirestriction
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:6195_Mostly_uncharacterized,_incl._DNA-binding_recombinase_domain,_and_Antirestriction


id: CL:6196
description: Mixed, incl. DNA-binding recombinase domain, and Maff2 family
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:6196_Mixed,_incl._DNA-binding_recombinase_domain,_and_Maff2_family


id: CL:6198
description: Mostly uncharacterized, incl. DNA-binding recombinase domain, and Maff2 family
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:6198_Mostly_uncharacterized,_incl._DNA-binding_recombinase_domain,_and_Maff2_family


id: CL:6201
description: Mostly uncharacterized, incl. Maff2 family, and Domain of unknown function DUF4366
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:6201_Mostly_uncharacterized,_incl._Maff2_family,_and_Domain_of_unknown_function_DUF4366


id: CL:6203
description: Mixed, incl. Maff2 family, and Protein of unknown function DUF3801
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:6203_Mixed,_incl._Maff2_family,_and_Protein_of_unknown_function_DUF3801


id: CL:6219
description: Mixed, incl. Antirestriction protein ArdA, domain 1, and ParB/Sulfiredoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:6219_Mixed,_incl._Antirestriction_protein_ArdA,_domain_1,_and_ParB/Sulfiredoxin


id: CL:625
description: Mixed, incl. Ureidoglycolate lyase activity, and Cobalt ion binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:625_Mixed,_incl._Ureidoglycolate_lyase_activity,_and_Cobalt_ion_binding


id: CL:6250
description: Mostly uncharacterized, incl. Maff2 family, and NlpC/P60 family
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:6250_Mostly_uncharacterized,_incl._Maff2_family,_and_NlpC/P60_family


id: CL:6252
description: Mixed, incl. Maff2 family, and NlpC/P60 family
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:6252_Mixed,_incl._Maff2_family,_and_NlpC/P60_family


id: CL:6272
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:6272_Mixed,_incl._Endonuclease_relaxase,_MobA/VirD2,_and_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen

description:
  Mixed, incl. Endonuclease relaxase, MobA/VirD2, and Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen


id: CL:6286
description: Mixed, incl. C-5 methylation of cytosine
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:6286_Mixed,_incl._C-5_methylation_of_cytosine


id: CL:6295
description: Mixed, incl. Calcium, and Aminoacyl-tRNA editing domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:6295_Mixed,_incl._Calcium,_and_Aminoacyl-tRNA_editing_domain


id: CL:6319
description: Mixed, incl. Integrase, catalytic core, and Helix-turn-helix domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:6319_Mixed,_incl._Integrase,_catalytic_core,_and_Helix-turn-helix_domain


id: CL:6322
description: Mixed, incl. Transposase InsH, N-terminal, and Regulation of growth
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:6322_Mixed,_incl._Transposase_InsH,_N-terminal,_and_Regulation_of_growth


id: CL:6348
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:6348_Mixed,_incl._Ferrous_iron_transmembrane_transporter_activity,_and_Ferrous_iron_transporter_FeoA_domain

description:
  Mixed, incl. Ferrous iron transmembrane transporter activity, and Ferrous iron transporter FeoA domain


id: CL:635
description: Asp/Glu/Hydantoin racemase, and Xylose isomerase-like TIM barrel
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:635_Asp/Glu/Hydantoin_racemase,_and_Xylose_isomerase-like_TIM_barrel


id: CL:6350
description: Mixed, incl. Ferrous iron transporter FeoA domain, and FeoB, cytosolic helical domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:6350_Mixed,_incl._Ferrous_iron_transporter_FeoA_domain,_and_FeoB,_cytosolic_helical_domain


id: CL:6368
description: Mixed, incl. 4Fe-4S binding domain, and Domain of unknown function DUF4368
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:6368_Mixed,_incl._4Fe-4S_binding_domain,_and_Domain_of_unknown_function_DUF4368


id: CL:6380
description: Mixed, incl. Heavy metal-associated domain, HMA, and Metal-sensitive transcriptional repressor
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:6380_Mixed,_incl._Heavy_metal-associated_domain,_HMA,_and_Metal-sensitive_transcriptional_repressor


id: CL:6382
description: Mixed, incl. Heavy metal-associated domain, HMA, and Metal-sensitive transcriptional repressor
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:6382_Mixed,_incl._Heavy_metal-associated_domain,_HMA,_and_Metal-sensitive_transcriptional_repressor


id: CL:6383
description: Mixed, incl. P-type ATPase, subfamily IB, and Metal-sensitive transcriptional repressor
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:6383_Mixed,_incl._P-type_ATPase,_subfamily_IB,_and_Metal-sensitive_transcriptional_repressor


id: CL:6385
description: Heavy metal-associated domain, HMA, and Metal-sensitive transcriptional repressor
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:6385_Heavy_metal-associated_domain,_HMA,_and_Metal-sensitive_transcriptional_repressor


id: CL:6408
description: Mixed, incl. Cupredoxin, and Membrane iron-sulfur containing protein FtrD-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:6408_Mixed,_incl._Cupredoxin,_and_Membrane_iron-sulfur_containing_protein_FtrD-like


id: CL:6432
description: Mostly uncharacterized, incl. Oligopeptide transport, and Rad50/SbcC-type AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:6432_Mostly_uncharacterized,_incl._Oligopeptide_transport,_and_Rad50/SbcC-type_AAA_domain


id: CL:6434
description: Mixed, incl. Serine aminopeptidase, S33, and SpoVT-AbrB domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:6434_Mixed,_incl._Serine_aminopeptidase,_S33,_and_SpoVT-AbrB_domain_superfamily


id: CL:6450
description: Mixed, incl. Oligopeptide transport, and Biosynthesis of siderophore group nonribosomal peptides
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:6450_Mixed,_incl._Oligopeptide_transport,_and_Biosynthesis_of_siderophore_group_nonribosomal_peptides


id: CL:6459
description: Mostly uncharacterized, incl. Cupredoxin, and ThiF family
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:6459_Mostly_uncharacterized,_incl._Cupredoxin,_and_ThiF_family


id: CL:6461
description: Mixed, incl. ThiF family, and Peptidase U32
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:6461_Mixed,_incl._ThiF_family,_and_Peptidase_U32


id: CL:647
description: Mixed, incl. Amine-lyase activity, and Triose-phosphate Transporter family
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:647_Mixed,_incl._Amine-lyase_activity,_and_Triose-phosphate_Transporter_family


id: CL:6486
description: Mixed, incl. FAD dependent protein, and LytR_cpsA_psr family
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:6486_Mixed,_incl._FAD_dependent_protein,_and_LytR_cpsA_psr_family


id: CL:6487
description: Mixed, incl. LytR_cpsA_psr family, and FAD dependent protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:6487_Mixed,_incl._LytR_cpsA_psr_family,_and_FAD_dependent_protein


id: CL:6496
description: Mixed, incl. FAD dependent protein, and Bile acid catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:6496_Mixed,_incl._FAD_dependent_protein,_and_Bile_acid_catabolic_process


id: CL:6505
description: Mostly uncharacterized, incl. Pyridoxamine 5-phosphate oxidase, and Formate/nitrite transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:6505_Mostly_uncharacterized,_incl._Pyridoxamine_5-phosphate_oxidase,_and_Formate/nitrite_transporter


id: CL:6506
description: Mixed, incl. Pyridoxamine 5-phosphate oxidase, and Formate/nitrite transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:6506_Mixed,_incl._Pyridoxamine_5-phosphate_oxidase,_and_Formate/nitrite_transporter


id: CL:6507
description: Mixed, incl. Pyridoxamine 5-phosphate oxidase, and Formate/nitrite transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:6507_Mixed,_incl._Pyridoxamine_5-phosphate_oxidase,_and_Formate/nitrite_transporter


id: CL:6508
description: Pyridoxamine 5-phosphate oxidase, and Transcription regulator PadR, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:6508_Pyridoxamine_5-phosphate_oxidase,_and_Transcription_regulator_PadR,_N-terminal


id: CL:6517
description: Mixed, incl. Formate/nitrite transporter, and Protein repair
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:6517_Mixed,_incl._Formate/nitrite_transporter,_and_Protein_repair


id: CL:6526
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:6526_Mixed,_incl._UDP-N-acetylglucosamine_biosynthetic_process,_and_Helix-turn-helix_XRE-family_like_proteins

description:
  Mixed, incl. UDP-N-acetylglucosamine biosynthetic process, and Helix-turn-helix XRE-family like proteins


id: CL:6535
description: Mixed, incl. Helix-turn-helix, and DNA integration
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:6535_Mixed,_incl._Helix-turn-helix,_and_DNA_integration


id: CL:6546
description: Mixed, incl. Transposition, and Mechanosensitive ion channel activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:6546_Mixed,_incl._Transposition,_and_Mechanosensitive_ion_channel_activity


id: CL:6549
description: Transposition, and Amidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:6549_Transposition,_and_Amidase_activity


id: CL:6551
description: DDE transposase sub-family, and Putative transposase of IS4/5 family (DUF4096)
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:6551_DDE_transposase_sub-family,_and_Putative_transposase_of_IS4/5_family_(DUF4096)


id: CL:6556
description: DDE transposase sub-family, and Putative transposase of IS4/5 family (DUF4096)
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:6556_DDE_transposase_sub-family,_and_Putative_transposase_of_IS4/5_family_(DUF4096)


id: CL:6560
description: Putative transposase of IS4/5 family (DUF4096), and DDE transposase sub-family
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:6560_Putative_transposase_of_IS4/5_family_(DUF4096),_and_DDE_transposase_sub-family


id: CL:6597
description: Mixed, incl. Ion channel, and Cellular response to abiotic stimulus
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:6597_Mixed,_incl._Ion_channel,_and_Cellular_response_to_abiotic_stimulus


id: CL:6611
description: Mixed, incl. Ribbon-helix-helix protein, copG family, and Hexapeptide transferase, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:6611_Mixed,_incl._Ribbon-helix-helix_protein,_copG_family,_and_Hexapeptide_transferase,_conserved_site


id: CL:6623
description: Response to virus, and Maintenance of DNA repeat elements
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:6623_Response_to_virus,_and_Maintenance_of_DNA_repeat_elements


id: CL:6637
description: Mixed, incl. Symport, and DNA integration
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:6637_Mixed,_incl._Symport,_and_DNA_integration


id: CL:667
description: Mixed, incl. Pentose and glucuronate interconversions, and Inositol catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:667_Mixed,_incl._Pentose_and_glucuronate_interconversions,_and_Inositol_catabolic_process


id: CL:668
description: Mixed, incl. Pentose and glucuronate interconversions, and Inositol catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:668_Mixed,_incl._Pentose_and_glucuronate_interconversions,_and_Inositol_catabolic_process


id: CL:669
description: Inositol catabolic process, and Xylose isomerase-like TIM barrel
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:669_Inositol_catabolic_process,_and_Xylose_isomerase-like_TIM_barrel


id: CL:672
description: Inositol catabolic process, and Xylose isomerase-like TIM barrel
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:672_Inositol_catabolic_process,_and_Xylose_isomerase-like_TIM_barrel


id: CL:696
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:696_Mixed,_incl._FAD-dependent_oxidoreductase_SdhA/FrdA/AprA,_and_NADH:flavin_oxidoreductase_/_NADH_oxidase_family

description:
  Mixed, incl. FAD-dependent oxidoreductase SdhA/FrdA/AprA, and NADH:flavin oxidoreductase / NADH oxidase family


id: CL:713
description: Mixed, incl. Uronic acid metabolic process, and Hexitol metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:713_Mixed,_incl._Uronic_acid_metabolic_process,_and_Hexitol_metabolic_process


id: CL:714
description: Mixed, incl. Uronic acid metabolic process, and Hexitol metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:714_Mixed,_incl._Uronic_acid_metabolic_process,_and_Hexitol_metabolic_process


id: CL:716
description: Hexitol metabolic process, and Glucuronate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:716_Hexitol_metabolic_process,_and_Glucuronate_metabolic_process


id: CL:735
description: Galacturonate catabolic process, and Aldolase/RraA
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:735_Galacturonate_catabolic_process,_and_Aldolase/RraA


id: CL:751
description: Mixed, incl. Alcohol dehydrogenase-like, C-terminal, and Aldo/keto reductase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:751_Mixed,_incl._Alcohol_dehydrogenase-like,_C-terminal,_and_Aldo/keto_reductase_family


id: CL:752
description: Mixed, incl. Alcohol dehydrogenase-like, C-terminal, and Aldo/keto reductase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:752_Mixed,_incl._Alcohol_dehydrogenase-like,_C-terminal,_and_Aldo/keto_reductase_family


id: CL:753
description: Mixed, incl. Alcohol dehydrogenase-like, C-terminal, and Class II aldolase/adducin N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:753_Mixed,_incl._Alcohol_dehydrogenase-like,_C-terminal,_and_Class_II_aldolase/adducin_N-terminal


id: CL:754
description: Alcohol dehydrogenase-like, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:754_Alcohol_dehydrogenase-like,_C-terminal


id: CL:765
description: Class II aldolase/adducin N-terminal, and Carbohydrate kinase, FGGY, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:765_Class_II_aldolase/adducin_N-terminal,_and_Carbohydrate_kinase,_FGGY,_C-terminal


id: CL:777
description: Methylglyoxal synthase, and Butanol dehydrogenase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:777_Methylglyoxal_synthase,_and_Butanol_dehydrogenase-like


id: CL:791
description: Mixed, incl. Side of membrane, and D-xylose metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:791_Mixed,_incl._Side_of_membrane,_and_D-xylose_metabolic_process


id: CL:801
description: Mixed, incl. Glycerolipid metabolism, and FAD dependent oxidoreductase
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:801_Mixed,_incl._Glycerolipid_metabolism,_and_FAD_dependent_oxidoreductase


id: CL:803
description: Mixed, incl. Glycerol kinase activity, and FAD dependent oxidoreductase
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:803_Mixed,_incl._Glycerol_kinase_activity,_and_FAD_dependent_oxidoreductase


id: CL:832
description: Mixed, incl. Amino-acid biosynthesis, and Nucleoside monophosphate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:832_Mixed,_incl._Amino-acid_biosynthesis,_and_Nucleoside_monophosphate_metabolic_process


id: CL:833
description: Organic cyclic compound biosynthetic process, and Histidine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:833_Organic_cyclic_compound_biosynthetic_process,_and_Histidine_metabolism


id: CL:834
description: Mixed, incl. Nucleoside monophosphate biosynthetic process, and Tetrahydrofolate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:834_Mixed,_incl._Nucleoside_monophosphate_biosynthetic_process,_and_Tetrahydrofolate_metabolic_process


id: CL:835
description: Nucleoside monophosphate biosynthetic process, and One-carbon metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:835_Nucleoside_monophosphate_biosynthetic_process,_and_One-carbon_metabolic_process


id: CL:836
description: Ribonucleoside monophosphate biosynthetic process, and One-carbon metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:836_Ribonucleoside_monophosphate_biosynthetic_process,_and_One-carbon_metabolic_process


id: CL:837
description: One-carbon metabolic process, and Ribonucleoside monophosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:837_One-carbon_metabolic_process,_and_Ribonucleoside_monophosphate_biosynthetic_process


id: CL:838
description: One-carbon metabolic process, and De novo IMP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:838_One-carbon_metabolic_process,_and_De_novo_IMP_biosynthetic_process


id: CL:839
description: Purine biosynthesis, and Cyanoamino acid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:839_Purine_biosynthesis,_and_Cyanoamino_acid_metabolism


id: CL:840
description: De novo IMP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:840_De_novo_IMP_biosynthetic_process


id: CL:842
description: PurM-like, N-terminal domain, and De novo IMP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:842_PurM-like,_N-terminal_domain,_and_De_novo_IMP_biosynthetic_process


id: CL:873
description: Cyclodeaminase/cyclohydrolase, and Formiminotransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:873_Cyclodeaminase/cyclohydrolase,_and_Formiminotransferase_domain


id: CL:911
description: GMP biosynthetic process, and Phosphoribosyl transferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:911_GMP_biosynthetic_process,_and_Phosphoribosyl_transferase_domain


id: CL:925
description: Mixed, incl. Deoxyribonucleotide biosynthetic process, and Peptidase U32
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:925_Mixed,_incl._Deoxyribonucleotide_biosynthetic_process,_and_Peptidase_U32


id: CL:926
description: Mixed, incl. Peptidase U32, and YceG-like family
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:926_Mixed,_incl._Peptidase_U32,_and_YceG-like_family


id: CL:937
description: Deoxyribonucleotide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:937_Deoxyribonucleotide_biosynthetic_process


id: CL:948
description: Riboflavin metabolism, and Tetrahydrofolate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:948_Riboflavin_metabolism,_and_Tetrahydrofolate_biosynthetic_process


id: CL:949
description: Riboflavin metabolic process, and Tetrahydrofolate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:949_Riboflavin_metabolic_process,_and_Tetrahydrofolate_biosynthetic_process


id: CL:952
description: Riboflavin biosynthesis, and ATP synthase subunit alpha, N-terminal domain-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:952_Riboflavin_biosynthesis,_and_ATP_synthase_subunit_alpha,_N-terminal_domain-like_superfamily


id: CL:964
description: Tetrahydrofolate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:964_Tetrahydrofolate_biosynthetic_process


id: CL:976
description: Nitroreductase family, and Biotin
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:976_Nitroreductase_family,_and_Biotin


id: CL:989
description: Phenylalanine, tyrosine and tryptophan biosynthesis, and Histidine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:989_Phenylalanine,_tyrosine_and_tryptophan_biosynthesis,_and_Histidine_biosynthesis


id: CL:991
description: Phenylalanine, tyrosine and tryptophan biosynthesis, and Histidine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:991_Phenylalanine,_tyrosine_and_tryptophan_biosynthesis,_and_Histidine_biosynthesis


id: CL:992
description: Aromatic amino acid family biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:992_Aromatic_amino_acid_family_biosynthetic_process


id: CL:995
description: Chorismate metabolic process, and Novobiocin biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1105031_STRINGid_CL:995_Chorismate_metabolic_process,_and_Novobiocin_biosynthesis


id: GO:0000701
description: Purine-specific mismatch base pair DNA N-glycosylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0000701
golevel: 6
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0000701_Purine-specific_mismatch_base_pair_DNA_N-glycosylase_activity


id: GO:0000716
description: Transcription-coupled nucleotide-excision repair, DNA damage recognition
memo: https://amigo.geneontology.org/amigo/term/GO:0000716
golevel: 7
name:
  GOBP.STRING_v12.0_1105031_STRINGid_GO:0000716_Transcription-coupled_nucleotide-excision_repair,_DNA_damage_recognition


id: GO:0000724
description: Double-strand break repair via homologous recombination
memo: https://amigo.geneontology.org/amigo/term/GO:0000724
golevel: 7
name:
  GOBP.STRING_v12.0_1105031_STRINGid_GO:0000724_Double-strand_break_repair_via_homologous_recombination


id: GO:0001073
description: Transcription antitermination factor activity, DNA binding
memo: https://amigo.geneontology.org/amigo/term/GO:0001073
golevel: 2
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0001073_Transcription_antitermination_factor_activity,_DNA_binding


id: GO:0002926
description: tRNA wobble base 5-methoxycarbonylmethyl-2-thiouridinylation
memo: https://amigo.geneontology.org/amigo/term/GO:0002926
golevel: 9
name:
  GOBP.STRING_v12.0_1105031_STRINGid_GO:0002926_tRNA_wobble_base_5-methoxycarbonylmethyl-2-thiouridinylation


id: GO:0003848
description: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003848
golevel: 5
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0003848_2-amino-4-hydroxy-6-hydroxymethyldihydropteridine_diphosphokinase_activity


id: GO:0003871
description: 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003871
golevel: 6
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0003871_5-methyltetrahydropteroyltriglutamate-homocysteine_S-methyltransferase_activity


id: GO:0003906
description: DNA-(apurinic or apyrimidinic site) endonuclease activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003906
golevel: 6
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0003906_DNA-(apurinic_or_apyrimidinic_site)_endonuclease_activity


id: GO:0003908
description: methylated-DNA-[protein]-cysteine S-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003908
golevel: 4
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0003908_methylated-DNA-[protein]-cysteine_S-methyltransferase_activity


id: GO:0003917
description: DNA topoisomerase type I (single strand cut, ATP-independent) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003917
golevel: 5
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0003917_DNA_topoisomerase_type_I_(single_strand_cut,_ATP-independent)_activity


id: GO:0003918
description: DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003918
golevel: 3
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0003918_DNA_topoisomerase_type_II_(double_strand_cut,_ATP-hydrolyzing)_activity


id: GO:0003949
memo: https://amigo.geneontology.org/amigo/term/GO:0003949
golevel: 5
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0003949_1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide_isomerase_activity

description:
  1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity


id: GO:0003992
description: N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003992
golevel: 5
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0003992_N2-acetyl-L-ornithine:2-oxoglutarate_5-aminotransferase_activity


id: GO:0004018
description: N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004018
golevel: 5
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0004018_N6-(1,2-dicarboxyethyl)AMP_AMP-lyase_(fumarate-forming)_activity


id: GO:0004088
description: Carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004088
golevel: 5
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0004088_Carbamoyl-phosphate_synthase_(glutamine-hydrolyzing)_activity


id: GO:0004316
description: 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004316
golevel: 5
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0004316_3-oxoacyl-[acyl-carrier-protein]_reductase_(NADPH)_activity


id: GO:0004317
description: 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004317
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0004317_3-hydroxypalmitoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0004360
description: glutamine-fructose-6-phosphate transaminase (isomerizing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004360
golevel: 6
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0004360_glutamine-fructose-6-phosphate_transaminase_(isomerizing)_activity


id: GO:0004471
description: Malate dehydrogenase (decarboxylating) (NAD+) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004471
golevel: 5
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0004471_Malate_dehydrogenase_(decarboxylating)_(NAD+)_activity


id: GO:0004486
description: Methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004486
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0004486_Methylenetetrahydrofolate_dehydrogenase_[NAD(P)+]_activity


id: GO:0004488
description: Methylenetetrahydrofolate dehydrogenase (NADP+) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004488
golevel: 5
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0004488_Methylenetetrahydrofolate_dehydrogenase_(NADP+)_activity


id: GO:0004489
description: Methylenetetrahydrofolate reductase (NAD(P)H) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004489
golevel: 5
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0004489_Methylenetetrahydrofolate_reductase_(NAD(P)H)_activity


id: GO:0004514
description: Nicotinate-nucleotide diphosphorylase (carboxylating) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004514
golevel: 5
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0004514_Nicotinate-nucleotide_diphosphorylase_(carboxylating)_activity


id: GO:0004639
description: Phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004639
golevel: 5
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0004639_Phosphoribosylaminoimidazolesuccinocarboxamide_synthase_activity


id: GO:0004641
description: Phosphoribosylformylglycinamidine cyclo-ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004641
golevel: 5
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0004641_Phosphoribosylformylglycinamidine_cyclo-ligase_activity


id: GO:0004643
description: Phosphoribosylaminoimidazolecarboxamide formyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004643
golevel: 5
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0004643_Phosphoribosylaminoimidazolecarboxamide_formyltransferase_activity


id: GO:0004648
description: O-phospho-L-serine:2-oxoglutarate aminotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004648
golevel: 5
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0004648_O-phospho-L-serine:2-oxoglutarate_aminotransferase_activity


id: GO:0005315
description: Inorganic phosphate transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0005315
golevel: 5
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0005315_Inorganic_phosphate_transmembrane_transporter_activity


id: GO:0006515
description: Protein quality control for misfolded or incompletely synthesized proteins
memo: https://amigo.geneontology.org/amigo/term/GO:0006515
golevel: 7
name:
  GOBP.STRING_v12.0_1105031_STRINGid_GO:0006515_Protein_quality_control_for_misfolded_or_incompletely_synthesized_proteins


id: GO:0006614
description: SRP-dependent cotranslational protein targeting to membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0006614
golevel: 6
name:
  GOBP.STRING_v12.0_1105031_STRINGid_GO:0006614_SRP-dependent_cotranslational_protein_targeting_to_membrane


id: GO:0008028
description: Monocarboxylic acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008028
golevel: 4
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0008028_Monocarboxylic_acid_transmembrane_transporter_activity


id: GO:0008271
description: Secondary active sulfate transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008271
golevel: 5
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0008271_Secondary_active_sulfate_transmembrane_transporter_activity


id: GO:0008444
description: CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008444
golevel: 6
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0008444_CDP-diacylglycerol-glycerol-3-phosphate_3-phosphatidyltransferase_activity


id: GO:0008534
description: Oxidized purine nucleobase lesion DNA N-glycosylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008534
golevel: 6
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0008534_Oxidized_purine_nucleobase_lesion_DNA_N-glycosylase_activity


id: GO:0008657
description: DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) inhibitor activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008657
golevel: 4
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0008657_DNA_topoisomerase_type_II_(double_strand_cut,_ATP-hydrolyzing)_inhibitor_activity


id: GO:0008659
description: (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008659
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0008659_(3R)-hydroxymyristoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0008685
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008685
golevel: 4
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0008685_2-C-methyl-D-erythritol_2,4-cyclodiphosphate_synthase_activity


id: GO:0008686
description: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008686
golevel: 4
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0008686_3,4-dihydroxy-2-butanone-4-phosphate_synthase_activity


id: GO:0008693
description: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008693
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0008693_3-hydroxydecanoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0008697
description: 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008697
golevel: 5
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0008697_4-deoxy-L-threo-5-hexosulose-uronate_ketol-isomerase_activity


id: GO:0008703
description: 5-amino-6-(5-phosphoribosylamino)uracil reductase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008703
golevel: 5
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0008703_5-amino-6-(5-phosphoribosylamino)uracil_reductase_activity


id: GO:0008757
description: S-adenosylmethionine-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008757
golevel: 5
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0008757_S-adenosylmethionine-dependent_methyltransferase_activity


id: GO:0008760
description: UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008760
golevel: 4
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0008760_UDP-N-acetylglucosamine_1-carboxyvinyltransferase_activity


id: GO:0008764
description: UDP-N-acetylmuramoylalanine-D-glutamate ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008764
golevel: 5
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0008764_UDP-N-acetylmuramoylalanine-D-glutamate_ligase_activity


id: GO:0008765
description: UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008765
golevel: 5
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0008765_UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate_ligase_activity


id: GO:0008766
description: UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008766
golevel: 5
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0008766_UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine_ligase_activity


id: GO:0008817
description: cob(I)yrinic acid a,c-diamide adenosyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008817
golevel: 4
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0008817_cob(I)yrinic_acid_a,c-diamide_adenosyltransferase_activity


id: GO:0008835
description: Diaminohydroxyphosphoribosylaminopyrimidine deaminase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008835
golevel: 5
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0008835_Diaminohydroxyphosphoribosylaminopyrimidine_deaminase_activity


id: GO:0008961
description: Phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008961
golevel: 3
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0008961_Phosphatidylglycerol-prolipoprotein_diacylglyceryl_transferase_activity


id: GO:0008963
description: phospho-N-acetylmuramoyl-pentapeptide-transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008963
golevel: 5
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0008963_phospho-N-acetylmuramoyl-pentapeptide-transferase_activity


id: GO:0009095
description: Aromatic amino acid family biosynthetic process, prephenate pathway
memo: https://amigo.geneontology.org/amigo/term/GO:0009095
golevel: 7
name:
  GOBP.STRING_v12.0_1105031_STRINGid_GO:0009095_Aromatic_amino_acid_family_biosynthetic_process,_prephenate_pathway


id: GO:0009130
description: Pyrimidine nucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009130
golevel: 7
name:
  GOBP.STRING_v12.0_1105031_STRINGid_GO:0009130_Pyrimidine_nucleoside_monophosphate_biosynthetic_process


id: GO:0009139
description: Pyrimidine nucleoside diphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009139
golevel: 7
name:
  GOBP.STRING_v12.0_1105031_STRINGid_GO:0009139_Pyrimidine_nucleoside_diphosphate_biosynthetic_process


id: GO:0009148
description: Pyrimidine nucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009148
golevel: 7
name:
  GOBP.STRING_v12.0_1105031_STRINGid_GO:0009148_Pyrimidine_nucleoside_triphosphate_biosynthetic_process


id: GO:0009157
description: Deoxyribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009157
golevel: 7
name:
  GOBP.STRING_v12.0_1105031_STRINGid_GO:0009157_Deoxyribonucleoside_monophosphate_biosynthetic_process


id: GO:0009168
description: Purine ribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009168
golevel: 8
name:
  GOBP.STRING_v12.0_1105031_STRINGid_GO:0009168_Purine_ribonucleoside_monophosphate_biosynthetic_process


id: GO:0009173
description: Pyrimidine ribonucleoside monophosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009173
golevel: 8
name:
  GOBP.STRING_v12.0_1105031_STRINGid_GO:0009173_Pyrimidine_ribonucleoside_monophosphate_metabolic_process


id: GO:0009174
description: Pyrimidine ribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009174
golevel: 8
name:
  GOBP.STRING_v12.0_1105031_STRINGid_GO:0009174_Pyrimidine_ribonucleoside_monophosphate_biosynthetic_process


id: GO:0009176
description: Pyrimidine deoxyribonucleoside monophosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009176
golevel: 8
name:
  GOBP.STRING_v12.0_1105031_STRINGid_GO:0009176_Pyrimidine_deoxyribonucleoside_monophosphate_metabolic_process


id: GO:0009177
description: Pyrimidine deoxyribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009177
golevel: 8
name:
  GOBP.STRING_v12.0_1105031_STRINGid_GO:0009177_Pyrimidine_deoxyribonucleoside_monophosphate_biosynthetic_process


id: GO:0009196
description: Pyrimidine deoxyribonucleoside diphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009196
golevel: 8
name:
  GOBP.STRING_v12.0_1105031_STRINGid_GO:0009196_Pyrimidine_deoxyribonucleoside_diphosphate_metabolic_process


id: GO:0009197
description: Pyrimidine deoxyribonucleoside diphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009197
golevel: 8
name:
  GOBP.STRING_v12.0_1105031_STRINGid_GO:0009197_Pyrimidine_deoxyribonucleoside_diphosphate_biosynthetic_process


id: GO:0009206
description: Purine ribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009206
golevel: 8
name:
  GOBP.STRING_v12.0_1105031_STRINGid_GO:0009206_Purine_ribonucleoside_triphosphate_biosynthetic_process


id: GO:0009208
description: Pyrimidine ribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009208
golevel: 8
name:
  GOBP.STRING_v12.0_1105031_STRINGid_GO:0009208_Pyrimidine_ribonucleoside_triphosphate_metabolic_process


id: GO:0009209
description: Pyrimidine ribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009209
golevel: 8
name:
  GOBP.STRING_v12.0_1105031_STRINGid_GO:0009209_Pyrimidine_ribonucleoside_triphosphate_biosynthetic_process


id: GO:0009210
description: Pyrimidine ribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009210
golevel: 8
name:
  GOBP.STRING_v12.0_1105031_STRINGid_GO:0009210_Pyrimidine_ribonucleoside_triphosphate_catabolic_process


id: GO:0009211
description: Pyrimidine deoxyribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009211
golevel: 8
name:
  GOBP.STRING_v12.0_1105031_STRINGid_GO:0009211_Pyrimidine_deoxyribonucleoside_triphosphate_metabolic_process


id: GO:0009212
description: Pyrimidine deoxyribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009212
golevel: 8
name:
  GOBP.STRING_v12.0_1105031_STRINGid_GO:0009212_Pyrimidine_deoxyribonucleoside_triphosphate_biosynthetic_process


id: GO:0009213
description: Pyrimidine deoxyribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009213
golevel: 8
name:
  GOBP.STRING_v12.0_1105031_STRINGid_GO:0009213_Pyrimidine_deoxyribonucleoside_triphosphate_catabolic_process


id: GO:0009215
description: Purine deoxyribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009215
golevel: 8
name:
  GOBP.STRING_v12.0_1105031_STRINGid_GO:0009215_Purine_deoxyribonucleoside_triphosphate_metabolic_process


id: GO:0009217
description: Purine deoxyribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009217
golevel: 8
name:
  GOBP.STRING_v12.0_1105031_STRINGid_GO:0009217_Purine_deoxyribonucleoside_triphosphate_catabolic_process


id: GO:0009401
description: Phosphoenolpyruvate-dependent sugar phosphotransferase system
memo: https://amigo.geneontology.org/amigo/term/GO:0009401
golevel: 5
name:
  GOBP.STRING_v12.0_1105031_STRINGid_GO:0009401_Phosphoenolpyruvate-dependent_sugar_phosphotransferase_system


id: GO:0009678
description: Pyrophosphate hydrolysis-driven proton transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0009678
golevel: 5
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0009678_Pyrophosphate_hydrolysis-driven_proton_transmembrane_transporter_activity


id: GO:0010557
description: Positive regulation of macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010557
golevel: 7
name:
  GOBP.STRING_v12.0_1105031_STRINGid_GO:0010557_Positive_regulation_of_macromolecule_biosynthetic_process


id: GO:0010558
description: Negative regulation of macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010558
golevel: 7
name:
  GOBP.STRING_v12.0_1105031_STRINGid_GO:0010558_Negative_regulation_of_macromolecule_biosynthetic_process


id: GO:0010604
description: Positive regulation of macromolecule metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010604
golevel: 6
name:
  GOBP.STRING_v12.0_1105031_STRINGid_GO:0010604_Positive_regulation_of_macromolecule_metabolic_process


id: GO:0010605
description: Negative regulation of macromolecule metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010605
golevel: 6
name:
  GOBP.STRING_v12.0_1105031_STRINGid_GO:0010605_Negative_regulation_of_macromolecule_metabolic_process


id: GO:0015318
description: Inorganic molecular entity transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015318
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0015318_Inorganic_molecular_entity_transmembrane_transporter_activity


id: GO:0015415
description: ATPase-coupled phosphate ion transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015415
golevel: 3
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0015415_ATPase-coupled_phosphate_ion_transmembrane_transporter_activity


id: GO:0015451
description: Decarboxylation-driven active transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015451
golevel: 5
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0015451_Decarboxylation-driven_active_transmembrane_transporter_activity


id: GO:0015453
description: Oxidoreduction-driven active transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015453
golevel: 5
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0015453_Oxidoreduction-driven_active_transmembrane_transporter_activity


id: GO:0015651
description: Quaternary ammonium group transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015651
golevel: 3
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0015651_Quaternary_ammonium_group_transmembrane_transporter_activity


id: GO:0015658
description: Branched-chain amino acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015658
golevel: 4
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0015658_Branched-chain_amino_acid_transmembrane_transporter_activity


id: GO:0016614
description: Oxidoreductase activity, acting on CH-OH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016614
golevel: 3
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0016614_Oxidoreductase_activity,_acting_on_CH-OH_group_of_donors


id: GO:0016616
description: Oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016616
golevel: 4
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0016616_Oxidoreductase_activity,_acting_on_the_CH-OH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016620
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016620
golevel: 4
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0016620_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016627
description: Oxidoreductase activity, acting on the CH-CH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016627
golevel: 3
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0016627_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors


id: GO:0016628
description: Oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016628
golevel: 4
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0016628_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016634
description: Oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016634
golevel: 4
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0016634_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_oxygen_as_acceptor


id: GO:0016635
memo: https://amigo.geneontology.org/amigo/term/GO:0016635
golevel: 4
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0016635_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_quinone_or_related_compound_as_acceptor

description:
  Oxidoreductase activity, acting on the CH-CH group of donors, quinone or related compound as acceptor


id: GO:0016638
description: Oxidoreductase activity, acting on the CH-NH2 group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016638
golevel: 3
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0016638_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors


id: GO:0016639
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016639
golevel: 4
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0016639_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016641
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016641
golevel: 4
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0016641_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_oxygen_as_acceptor


id: GO:0016645
description: Oxidoreductase activity, acting on the CH-NH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016645
golevel: 3
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0016645_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors


id: GO:0016646
description: Oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016646
golevel: 4
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0016646_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016655
description: Oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016655
golevel: 4
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0016655_Oxidoreductase_activity,_acting_on_NAD(P)H,_quinone_or_similar_compound_as_acceptor


id: GO:0016661
description: Oxidoreductase activity, acting on other nitrogenous compounds as donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016661
golevel: 3
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0016661_Oxidoreductase_activity,_acting_on_other_nitrogenous_compounds_as_donors


id: GO:0016667
description: Oxidoreductase activity, acting on a sulfur group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016667
golevel: 3
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0016667_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors


id: GO:0016668
description: Oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016668
golevel: 4
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0016668_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_NAD(P)_as_acceptor


id: GO:0016671
description: Oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016671
golevel: 4
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0016671_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_disulfide_as_acceptor


id: GO:0016684
description: Oxidoreductase activity, acting on peroxide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016684
golevel: 3
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0016684_Oxidoreductase_activity,_acting_on_peroxide_as_acceptor


id: GO:0016699
description: Oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016699
golevel: 4
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0016699_Oxidoreductase_activity,_acting_on_hydrogen_as_donor,_iron-sulfur_protein_as_acceptor


id: GO:0016701
description: Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen
memo: https://amigo.geneontology.org/amigo/term/GO:0016701
golevel: 3
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0016701_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen


id: GO:0016702
memo: https://amigo.geneontology.org/amigo/term/GO:0016702
golevel: 4
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0016702_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen,_incorporation_of_two_atoms_of_oxygen

description:
  Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen


id: GO:0016703
memo: https://amigo.geneontology.org/amigo/term/GO:0016703
golevel: 4
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0016703_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen,_incorporation_of_one_atom_of_oxygen_(internal_monooxygenases_or_internal_mixed_function_oxidases)

description:
  Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)


id: GO:0016705
memo: https://amigo.geneontology.org/amigo/term/GO:0016705
golevel: 3
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0016705_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen


id: GO:0016712
memo: https://amigo.geneontology.org/amigo/term/GO:0016712
golevel: 4
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0016712_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen,_reduced_flavin_or_flavoprotein_as_one_donor,_and_incorporation_of_one_atom_of_oxygen

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen


id: GO:0016721
description: Oxidoreductase activity, acting on superoxide radicals as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016721
golevel: 3
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0016721_Oxidoreductase_activity,_acting_on_superoxide_radicals_as_acceptor


id: GO:0016726
description: Oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016726
golevel: 4
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0016726_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_NAD_or_NADP_as_acceptor


id: GO:0016728
description: Oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016728
golevel: 4
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0016728_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_disulfide_as_acceptor


id: GO:0016730
description: Oxidoreductase activity, acting on iron-sulfur proteins as donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016730
golevel: 3
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0016730_Oxidoreductase_activity,_acting_on_iron-sulfur_proteins_as_donors


id: GO:0016732
description: Oxidoreductase activity, acting on iron-sulfur proteins as donors, dinitrogen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016732
golevel: 4
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0016732_Oxidoreductase_activity,_acting_on_iron-sulfur_proteins_as_donors,_dinitrogen_as_acceptor


id: GO:0016742
description: Hydroxymethyl-, formyl- and related transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0016742
golevel: 4
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0016742_Hydroxymethyl-,_formyl-_and_related_transferase_activity


id: GO:0016747
description: Acyltransferase activity, transferring groups other than amino-acyl groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016747
golevel: 4
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0016747_Acyltransferase_activity,_transferring_groups_other_than_amino-acyl_groups


id: GO:0016765
description: Transferase activity, transferring alkyl or aryl (other than methyl) groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016765
golevel: 3
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0016765_Transferase_activity,_transferring_alkyl_or_aryl_(other_than_methyl)_groups


id: GO:0016772
description: Transferase activity, transferring phosphorus-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016772
golevel: 3
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0016772_Transferase_activity,_transferring_phosphorus-containing_groups


id: GO:0016773
description: Phosphotransferase activity, alcohol group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016773
golevel: 4
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0016773_Phosphotransferase_activity,_alcohol_group_as_acceptor


id: GO:0016774
description: Phosphotransferase activity, carboxyl group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016774
golevel: 4
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0016774_Phosphotransferase_activity,_carboxyl_group_as_acceptor


id: GO:0016775
description: Phosphotransferase activity, nitrogenous group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016775
golevel: 4
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0016775_Phosphotransferase_activity,_nitrogenous_group_as_acceptor


id: GO:0016776
description: Phosphotransferase activity, phosphate group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016776
golevel: 4
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0016776_Phosphotransferase_activity,_phosphate_group_as_acceptor


id: GO:0016780
description: Phosphotransferase activity, for other substituted phosphate groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016780
golevel: 4
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0016780_Phosphotransferase_activity,_for_other_substituted_phosphate_groups


id: GO:0016782
description: Transferase activity, transferring sulphur-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016782
golevel: 3
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0016782_Transferase_activity,_transferring_sulphur-containing_groups


id: GO:0016796
memo: https://amigo.geneontology.org/amigo/term/GO:0016796
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0016796_Exonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_5-phosphomonoesters

description:
  Exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5-phosphomonoesters


id: GO:0016810
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
memo: https://amigo.geneontology.org/amigo/term/GO:0016810
golevel: 3
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0016810_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds


id: GO:0016811
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
memo: https://amigo.geneontology.org/amigo/term/GO:0016811
golevel: 4
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0016811_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_linear_amides


id: GO:0016812
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
memo: https://amigo.geneontology.org/amigo/term/GO:0016812
golevel: 4
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0016812_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_cyclic_amides


id: GO:0016813
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines
memo: https://amigo.geneontology.org/amigo/term/GO:0016813
golevel: 4
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0016813_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_linear_amidines


id: GO:0016814
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines
memo: https://amigo.geneontology.org/amigo/term/GO:0016814
golevel: 4
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0016814_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_cyclic_amidines


id: GO:0016818
description: Hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
memo: https://amigo.geneontology.org/amigo/term/GO:0016818
golevel: 4
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0016818_Hydrolase_activity,_acting_on_acid_anhydrides,_in_phosphorus-containing_anhydrides


id: GO:0016855
description: Racemase and epimerase activity, acting on amino acids and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0016855
golevel: 4
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0016855_Racemase_and_epimerase_activity,_acting_on_amino_acids_and_derivatives


id: GO:0016856
description: Racemase and epimerase activity, acting on hydroxy acids and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0016856
golevel: 4
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0016856_Racemase_and_epimerase_activity,_acting_on_hydroxy_acids_and_derivatives


id: GO:0016857
description: Racemase and epimerase activity, acting on carbohydrates and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0016857
golevel: 4
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0016857_Racemase_and_epimerase_activity,_acting_on_carbohydrates_and_derivatives


id: GO:0016861
description: Intramolecular oxidoreductase activity, interconverting aldoses and ketoses
memo: https://amigo.geneontology.org/amigo/term/GO:0016861
golevel: 4
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0016861_Intramolecular_oxidoreductase_activity,_interconverting_aldoses_and_ketoses


id: GO:0016863
description: Intramolecular oxidoreductase activity, transposing C=C bonds
memo: https://amigo.geneontology.org/amigo/term/GO:0016863
golevel: 4
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0016863_Intramolecular_oxidoreductase_activity,_transposing_C=C_bonds


id: GO:0016868
description: Intramolecular transferase activity, phosphotransferases
memo: https://amigo.geneontology.org/amigo/term/GO:0016868
golevel: 4
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0016868_Intramolecular_transferase_activity,_phosphotransferases


id: GO:0016869
description: Intramolecular transferase activity, transferring amino groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016869
golevel: 4
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0016869_Intramolecular_transferase_activity,_transferring_amino_groups


id: GO:0016884
description: Carbon-nitrogen ligase activity, with glutamine as amido-N-donor
memo: https://amigo.geneontology.org/amigo/term/GO:0016884
golevel: 4
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0016884_Carbon-nitrogen_ligase_activity,_with_glutamine_as_amido-N-donor


id: GO:0016888
description: Endodeoxyribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016888
golevel: 4
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0016888_Endodeoxyribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016889
description: Endodeoxyribonuclease activity, producing 3-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016889
golevel: 4
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0016889_Endodeoxyribonuclease_activity,_producing_3-phosphomonoesters


id: GO:0016891
description: Endoribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016891
golevel: 4
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0016891_Endoribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016893
memo: https://amigo.geneontology.org/amigo/term/GO:0016893
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0016893_Endonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_5-phosphomonoesters

description:
  Endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5-phosphomonoesters


id: GO:0016894
memo: https://amigo.geneontology.org/amigo/term/GO:0016894
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0016894_Endonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_3-phosphomonoesters

description:
  Endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3-phosphomonoesters


id: GO:0016895
description: Exodeoxyribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016895
golevel: 6
name:
  GOMF.STRING_v12.0_1105031_STRINGid_GO:0016895_Exodeoxyribonuclease_activity,_producing_5-phosphomonoesters


