# pathwayInfo

id: PF07221
description: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07221
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF07221_N-acylglucosamine_2-epimerase_(GlcNAc_2-epimerase)


id: PF07336
description: Putative stress-induced transcription regulator
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07336
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF07336_Putative_stress-induced_transcription_regulator


id: PF07479
description: NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07479
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF07479_NAD-dependent_glycerol-3-phosphate_dehydrogenase_C-terminus


id: PF07521
description: Zn-dependent metallo-hydrolase RNA specificity domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07521
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF07521_Zn-dependent_metallo-hydrolase_RNA_specificity_domain


id: PF07685
description: CobB/CobQ-like glutamine amidotransferase domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07685
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF07685_CobB/CobQ-like_glutamine_amidotransferase_domain


id: PF07733
description: Bacterial DNA polymerase III alpha NTPase domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07733
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF07733_Bacterial_DNA_polymerase_III_alpha_NTPase_domain


id: PF07835
description: Bacterial aa3 type cytochrome c oxidase subunit IV
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07835
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF07835_Bacterial_aa3_type_cytochrome_c_oxidase_subunit_IV


id: PF07879
description: PHB/PHA accumulation regulator DNA-binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07879
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF07879_PHB/PHA_accumulation_regulator_DNA-binding_domain


id: PF07963
description: Prokaryotic N-terminal methylation motif
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07963
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF07963_Prokaryotic_N-terminal_methylation_motif


id: PF07991
description: Acetohydroxy acid isomeroreductase, NADPH-binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07991
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF07991_Acetohydroxy_acid_isomeroreductase,_NADPH-binding_domain


id: PF07992
description: Pyridine nucleotide-disulphide oxidoreductase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07992
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF07992_Pyridine_nucleotide-disulphide_oxidoreductase


id: PF08028
description: Acyl-CoA dehydrogenase, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08028
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF08028_Acyl-CoA_dehydrogenase,_C-terminal_domain


id: PF08125
description: Mannitol dehydrogenase C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08125
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF08125_Mannitol_dehydrogenase_C-terminal_domain


id: PF08207
description: Elongation factor P (EF-P) KOW-like domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08207
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF08207_Elongation_factor_P_(EF-P)_KOW-like_domain


id: PF08240
description: Alcohol dehydrogenase GroES-like domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08240
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF08240_Alcohol_dehydrogenase_GroES-like_domain


id: PF08264
description: Anticodon-binding domain of tRNA ligase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08264
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF08264_Anticodon-binding_domain_of_tRNA_ligase


id: PF08275
description: DNA primase catalytic core, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08275
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF08275_DNA_primase_catalytic_core,_N-terminal_domain


id: PF08327
description: Activator of Hsp90 ATPase homolog 1-like protein
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08327
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF08327_Activator_of_Hsp90_ATPase_homolog_1-like_protein


id: PF08334
description: Type II secretion system (T2SS), protein G
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08334
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF08334_Type_II_secretion_system_(T2SS),_protein_G


id: PF08352
description: Oligopeptide/dipeptide transporter, C-terminal region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08352
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF08352_Oligopeptide/dipeptide_transporter,_C-terminal_region


id: PF08361
description: MAATS-type transcriptional repressor, C-terminal region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08361
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF08361_MAATS-type_transcriptional_repressor,_C-terminal_region


id: PF08364
description: Bacterial translation initiation factor IF-2 associated region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08364
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF08364_Bacterial_translation_initiation_factor_IF-2_associated_region


id: PF08379
description: Bacterial transglutaminase-like N-terminal region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08379
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF08379_Bacterial_transglutaminase-like_N-terminal_region


id: PF08436
description: 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08436
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF08436_1-deoxy-D-xylulose_5-phosphate_reductoisomerase_C-terminal_domain


id: PF08450
description: SMP-30/Gluconolactonase/LRE-like region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08450
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF08450_SMP-30/Gluconolactonase/LRE-like_region


id: PF08471
description: Class II vitamin B12-dependent ribonucleotide reductase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08471
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF08471_Class_II_vitamin_B12-dependent_ribonucleotide_reductase


id: PF08501
description: Shikimate dehydrogenase substrate binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08501
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF08501_Shikimate_dehydrogenase_substrate_binding_domain


id: PF08541
description: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08541
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF08541_3-Oxoacyl-[acyl-carrier-protein_(ACP)]_synthase_III_C_terminal__


id: PF08545
description: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08545
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF08545_3-Oxoacyl-[acyl-carrier-protein_(ACP)]_synthase_III


id: PF08669
description: Glycine cleavage T-protein C-terminal barrel domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08669
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF08669_Glycine_cleavage_T-protein_C-terminal_barrel_domain


id: PF08843
description: Nucleotidyl transferase AbiEii toxin, Type IV TA system
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08843
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF08843_Nucleotidyl_transferase_AbiEii_toxin,_Type_IV_TA_system


id: PF09157
description: Pseudouridine synthase II TruB, C-terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09157
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF09157_Pseudouridine_synthase_II_TruB,_C-terminal


id: PF09296
description: NADH pyrophosphatase-like rudimentary NUDIX domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09296
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF09296_NADH_pyrophosphatase-like_rudimentary_NUDIX_domain


id: PF09297
description: NADH pyrophosphatase zinc ribbon domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09297
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF09297_NADH_pyrophosphatase_zinc_ribbon_domain


id: PF09326
description: NADH-ubiquinone oxidoreductase subunit G, C-terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09326
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF09326_NADH-ubiquinone_oxidoreductase_subunit_G,_C-terminal


id: PF09413
description: Putative prokaryotic signal transducing protein
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09413
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF09413_Putative_prokaryotic_signal_transducing_protein_


id: PF09476
description: Pilus biogenesis CpaD protein (pilus_cpaD)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09476
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF09476_Pilus_biogenesis_CpaD_protein_(pilus_cpaD)


id: PF09490
description: Probable cobalt transporter subunit (CbtA)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09490
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF09490_Probable_cobalt_transporter_subunit_(CbtA)


id: PF09527
description: Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09527
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF09527_Putative_F0F1-ATPase_subunit_Ca2+/Mg2+_transporter


id: PF09538
description: Protein of unknown function (FYDLN_acid)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09538
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF09538_Protein_of_unknown_function_(FYDLN_acid)


id: PF09608
description: Putative transmembrane protein (Alph_Pro_TM)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09608
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF09608_Putative_transmembrane_protein_(Alph_Pro_TM)


id: PF09832
description: Uncharacterized protein conserved in bacteria (DUF2059)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09832
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF09832_Uncharacterized_protein_conserved_in_bacteria_(DUF2059)


id: PF09857
description: Putative toxin of bacterial toxin-antitoxin pair
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09857
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF09857_Putative_toxin_of_bacterial_toxin-antitoxin_pair


id: PF09863
description: Uncharacterized protein conserved in bacteria (DUF2090)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09863
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF09863_Uncharacterized_protein_conserved_in_bacteria_(DUF2090)


id: PF09864
description: Membrane-bound lysozyme-inhibitor of c-type lysozyme
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09864
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF09864_Membrane-bound_lysozyme-inhibitor_of_c-type_lysozyme


id: PF09866
description: Uncharacterized protein conserved in bacteria (DUF2093)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09866
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF09866_Uncharacterized_protein_conserved_in_bacteria_(DUF2093)


id: PF09898
description: Uncharacterized protein conserved in bacteria (DUF2125)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09898
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF09898_Uncharacterized_protein_conserved_in_bacteria_(DUF2125)


id: PF09923
description: Uncharacterized protein conserved in bacteria (DUF2155)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09923
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF09923_Uncharacterized_protein_conserved_in_bacteria_(DUF2155)


id: PF09928
description: Predicted small integral membrane protein (DUF2160)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09928
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF09928_Predicted_small_integral_membrane_protein_(DUF2160)


id: PF09929
description: Putative PD-(D/E)XK phosphodiesterase (DUF2161)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09929
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF09929_Putative_PD-(D/E)XK_phosphodiesterase_(DUF2161)


id: PF09948
description: Predicted metal-binding integral membrane protein (DUF2182)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09948
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF09948_Predicted_metal-binding_integral_membrane_protein_(DUF2182)


id: PF09954
description: Uncharacterized protein conserved in bacteria (DUF2188)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09954
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF09954_Uncharacterized_protein_conserved_in_bacteria_(DUF2188)


id: PF09955
description: Predicted integral membrane protein (DUF2189)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09955
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF09955_Predicted_integral_membrane_protein_(DUF2189)


id: PF09981
description: Uncharacterized protein conserved in bacteria (DUF2218)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09981
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF09981_Uncharacterized_protein_conserved_in_bacteria_(DUF2218)


id: PF09994
description: Uncharacterized alpha/beta hydrolase domain (DUF2235)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09994
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF09994_Uncharacterized_alpha/beta_hydrolase_domain_(DUF2235)


id: PF10006
description: Uncharacterized conserved protein (DUF2249)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10006
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF10006_Uncharacterized_conserved_protein_(DUF2249)


id: PF10022
description: Uncharacterized protein conserved in bacteria (DUF2264)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10022
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF10022_Uncharacterized_protein_conserved_in_bacteria_(DUF2264)


id: PF10025
description: Uncharacterized conserved protein (DUF2267)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10025
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF10025_Uncharacterized_conserved_protein_(DUF2267)


id: PF10027
description: Predicted integral membrane protein (DUF2269)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10027
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF10027_Predicted_integral_membrane_protein_(DUF2269)


id: PF10028
description: Predicted integral membrane protein (DUF2270)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10028
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF10028_Predicted_integral_membrane_protein_(DUF2270)


id: PF10073
description: Uncharacterized protein conserved in bacteria (DUF2312)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10073
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF10073_Uncharacterized_protein_conserved_in_bacteria_(DUF2312)


id: PF10087
description: Uncharacterized protein conserved in bacteria (DUF2325)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10087
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF10087_Uncharacterized_protein_conserved_in_bacteria_(DUF2325)


id: PF10090
description: Histidine phosphotransferase C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10090
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF10090_Histidine_phosphotransferase_C-terminal_domain


id: PF10094
description: Uncharacterized protein conserved in bacteria (DUF2332)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10094
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF10094_Uncharacterized_protein_conserved_in_bacteria_(DUF2332)


id: PF10095
description: Uncharacterized protein conserved in bacteria (DUF2333)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10095
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF10095_Uncharacterized_protein_conserved_in_bacteria_(DUF2333)


id: PF10098
description: Uncharacterised protein conserved in bacteria (DUF2336)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10098
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF10098_Uncharacterised_protein_conserved_in_bacteria_(DUF2336)


id: PF10116
description: Protein required for attachment to host cells
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10116
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF10116_Protein_required_for_attachment_to_host_cells


id: PF10385
description: RNA polymerase beta subunit external 1 domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10385
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF10385_RNA_polymerase_beta_subunit_external_1_domain


id: PF10399
description: Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10399
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF10399_Ubiquitinol-cytochrome_C_reductase_Fe-S_subunit_TAT_signal


id: PF10410
description: DnaB-helicase binding domain of primase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10410
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF10410_DnaB-helicase_binding_domain_of_primase


id: PF10412
description: Type IV secretion-system coupling protein DNA-binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10412
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF10412_Type_IV_secretion-system_coupling_protein_DNA-binding_domain


id: PF10423
description: Bacterial AMP nucleoside phosphorylase N-terminus
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10423
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF10423_Bacterial_AMP_nucleoside_phosphorylase_N-terminus_


id: PF10518
description: TAT (twin-arginine translocation) pathway signal sequence
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10518
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF10518_TAT_(twin-arginine_translocation)_pathway_signal_sequence


id: PF10555
description: Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10555
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF10555_Phospho-N-acetylmuramoyl-pentapeptide-transferase_signature_1_


id: PF10590
description: Pyridoxine 5-phosphate oxidase C-terminal dimerisation region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10590
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF10590_Pyridoxine_5-phosphate_oxidase_C-terminal_dimerisation_region


id: PF10604
description: Polyketide cyclase / dehydrase and lipid transport
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10604
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF10604_Polyketide_cyclase_/_dehydrase_and_lipid_transport


id: PF10662
description: Ethanolamine utilisation - propanediol utilisation
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10662
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF10662_Ethanolamine_utilisation_-_propanediol_utilisation


id: PF10722
description: Putative bacterial sensory transduction regulator
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10722
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF10722_Putative_bacterial_sensory_transduction_regulator


id: PF10947
description: Protein of unknown function (DUF2628)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10947
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF10947_Protein_of_unknown_function_(DUF2628)____


id: PF11390
description: NADH-dependant formate dehydrogenase delta subunit FdsD
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF11390
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF11390_NADH-dependant_formate_dehydrogenase_delta_subunit_FdsD


id: PF11614
description: IG-like fold at C-terminal of FixG, putative oxidoreductase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF11614
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF11614_IG-like_fold_at_C-terminal_of_FixG,_putative_oxidoreductase


id: PF11799
description: impB/mucB/samB family C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF11799
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF11799_impB/mucB/samB_family_C-terminal_domain


id: PF11800
description: Replication protein C C-terminal region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF11800
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF11800_Replication_protein_C_C-terminal_region


id: PF11940
description: Domain of unknown function (DUF3458) Ig-like fold
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF11940
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF11940_Domain_of_unknown_function_(DUF3458)_Ig-like_fold


id: PF12169
description: DNA polymerase III subunits gamma and tau domain III
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12169
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF12169_DNA_polymerase_III_subunits_gamma_and_tau_domain_III


id: PF12256
description: Insecticide toxin TcdB middle/N-terminal region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12256
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF12256_Insecticide_toxin_TcdB_middle/N-terminal_region


id: PF12362
description: DNA polymerase III gamma and tau subunits C terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12362
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF12362_DNA_polymerase_III_gamma_and_tau_subunits_C_terminal


id: PF12399
description: Branched-chain amino acid ATP-binding cassette transporter
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12399
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF12399_Branched-chain_amino_acid_ATP-binding_cassette_transporter


id: PF12551
description: Poly-beta-hydroxybutyrate polymerase N terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12551
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF12551_Poly-beta-hydroxybutyrate_polymerase_N_terminal


id: PF12556
description: Cobaltochelatase CobS subunit N terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12556
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF12556_Cobaltochelatase_CobS_subunit_N_terminal_


id: PF12573
description: 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12573
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF12573_2-oxoisovalerate_dehydrogenase_E1_alpha_subunit_N_terminal


id: PF12627
description: Probable RNA and SrmB- binding site of polymerase A
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12627
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF12627_Probable_RNA_and_SrmB-_binding_site_of_polymerase_A


id: PF12729
description: Four helix bundle sensory module for signal transduction
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12729
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF12729_Four_helix_bundle_sensory_module_for_signal_transduction


id: PF12806
description: Acetyl-CoA dehydrogenase C-terminal like
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12806
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF12806_Acetyl-CoA_dehydrogenase_C-terminal_like


id: PF12850
description: Calcineurin-like phosphoesterase superfamily domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12850
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF12850_Calcineurin-like_phosphoesterase_superfamily_domain


id: PF12911
description: N-terminal TM domain of oligopeptide transport permease C
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12911
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF12911_N-terminal_TM_domain_of_oligopeptide_transport_permease_C


id: PF13005
description: Zinc-finger binding domain of transposase IS66
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13005
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF13005_Zinc-finger_binding_domain_of_transposase_IS66_


id: PF13085
description: 2Fe-2S iron-sulfur cluster binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13085
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF13085_2Fe-2S_iron-sulfur_cluster_binding_domain


id: PF13090
description: Polyphosphate kinase C-terminal domain 2
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13090
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF13090_Polyphosphate_kinase_C-terminal_domain_2


id: PF13231
description: Dolichyl-phosphate-mannose-protein mannosyltransferase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13231
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF13231_Dolichyl-phosphate-mannose-protein_mannosyltransferase


id: PF13292
description: 1-deoxy-D-xylulose-5-phosphate synthase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13292
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF13292_1-deoxy-D-xylulose-5-phosphate_synthase


id: PF13304
description: AAA domain, putative AbiEii toxin, Type IV TA system
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13304
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF13304_AAA_domain,_putative_AbiEii_toxin,_Type_IV_TA_system


id: PF13335
description: Magnesium chelatase, subunit ChlI C-terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13335
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF13335_Magnesium_chelatase,_subunit_ChlI_C-terminal


id: PF13340
description: Putative transposase of IS4/5 family (DUF4096)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13340
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF13340_Putative_transposase_of_IS4/5_family_(DUF4096)


id: PF13343
description: Bacterial extracellular solute-binding protein
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13343
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF13343_Bacterial_extracellular_solute-binding_protein


id: PF13376
description: Bacteriocin-protection, YdeI or OmpD-Associated
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13376
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF13376_Bacteriocin-protection,_YdeI_or_OmpD-Associated


id: PF13377
description: Periplasmic binding protein-like domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13377
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF13377_Periplasmic_binding_protein-like_domain


id: PF13400
description: Putative Flp pilus-assembly TadE/G-like
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13400
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF13400_Putative_Flp_pilus-assembly_TadE/G-like


id: PF13409
description: Glutathione S-transferase, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13409
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF13409_Glutathione_S-transferase,_N-terminal_domain


id: PF13410
description: Glutathione S-transferase, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13410
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF13410_Glutathione_S-transferase,_C-terminal_domain


id: PF13416
description: Bacterial extracellular solute-binding protein
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13416
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF13416_Bacterial_extracellular_solute-binding_protein


id: PF13417
description: Glutathione S-transferase, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13417
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF13417_Glutathione_S-transferase,_N-terminal_domain


id: PF13442
description: Cytochrome C oxidase, cbb3-type, subunit III
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13442
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF13442_Cytochrome_C_oxidase,_cbb3-type,_subunit_III_


id: PF13491
description: 4TM region of DNA translocase FtsK/SpoIIIE
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13491
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF13491_4TM_region_of_DNA_translocase_FtsK/SpoIIIE


id: PF13505
description: Outer membrane protein beta-barrel domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13505
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF13505_Outer_membrane_protein_beta-barrel_domain


id: PF13510
description: 2Fe-2S iron-sulfur cluster binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13510
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF13510_2Fe-2S_iron-sulfur_cluster_binding_domain


id: PF13531
description: Bacterial extracellular solute-binding protein
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13531
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF13531_Bacterial_extracellular_solute-binding_protein


id: PF13607
description: Succinyl-CoA ligase like flavodoxin domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13607
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF13607_Succinyl-CoA_ligase_like_flavodoxin_domain


id: PF13627
description: Prokaryotic lipoprotein-attachment site
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13627
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF13627_Prokaryotic_lipoprotein-attachment_site


id: PF13629
description: Pilus formation protein N terminal region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13629
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF13629_Pilus_formation_protein_N_terminal_region


id: PF13669
description: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13669
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF13669_Glyoxalase/Bleomycin_resistance_protein/Dioxygenase_superfamily


id: PF13677
description: Membrane MotB of proton-channel complex MotA/MotB
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13677
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF13677_Membrane_MotB_of_proton-channel_complex_MotA/MotB_


id: PF13720
description: Udp N-acetylglucosamine O-acyltransferase; Domain 2
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13720
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF13720_Udp_N-acetylglucosamine_O-acyltransferase;_Domain_2


id: PF13738
description: Pyridine nucleotide-disulphide oxidoreductase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13738
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF13738_Pyridine_nucleotide-disulphide_oxidoreductase


id: PF13975
description: Gag-polyprotein putative aspartyl protease
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13975
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF13975_Gag-polyprotein_putative_aspartyl_protease


id: PF13977
description: BetI-type transcriptional repressor, C-terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13977
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF13977_BetI-type_transcriptional_repressor,_C-terminal


id: PF14246
description: AefR-like transcriptional repressor, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14246
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF14246_AefR-like_transcriptional_repressor,_C-terminal_domain


id: PF14384
description: BrnA antitoxin of type II toxin-antitoxin system
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14384
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF14384_BrnA_antitoxin_of_type_II_toxin-antitoxin_system


id: PF14497
description: Glutathione S-transferase, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14497
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF14497_Glutathione_S-transferase,_C-terminal_domain


id: PF14572
description: Phosphoribosyl synthetase-associated domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14572
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF14572_Phosphoribosyl_synthetase-associated_domain


id: PF14602
description: Hexapeptide repeat of succinyl-transferase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14602
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF14602_Hexapeptide_repeat_of_succinyl-transferase


id: PF14691
description: Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14691
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF14691_Dihydroprymidine_dehydrogenase_domain_II,_4Fe-4S_cluster


id: PF14693
description: Ribosomal protein TL5, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14693
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF14693_Ribosomal_protein_TL5,_C-terminal_domain


id: PF14696
description: Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14696
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF14696_Hydroxyphenylpyruvate_dioxygenase,_HPPD,_N-terminal_


id: PF14714
description: KH-domain-like of EngA bacterial GTPase enzymes, C-terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14714
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF14714_KH-domain-like_of_EngA_bacterial_GTPase_enzymes,_C-terminal


id: PF14715
description: N-terminal domain of cytochrome oxidase-cbb3, FixP
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14715
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF14715_N-terminal_domain_of_cytochrome_oxidase-cbb3,_FixP_


id: PF14748
description: Pyrroline-5-carboxylate reductase dimerisation
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14748
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF14748_Pyrroline-5-carboxylate_reductase_dimerisation


id: PF14805
description: Tetrahydrodipicolinate N-succinyltransferase N-terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14805
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF14805_Tetrahydrodipicolinate_N-succinyltransferase_N-terminal


id: PF14833
description: NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14833
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF14833_NAD-binding_of_NADP-dependent_3-hydroxyisobutyrate_dehydrogenase


id: PF14850
description: DNA-binding domain of Proline dehydrogenase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14850
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF14850_DNA-binding_domain_of_Proline_dehydrogenase


id: PF15887
description: Putative zinc-binding metallo-peptidase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF15887
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF15887_Putative_zinc-binding_metallo-peptidase


id: PF16078
description: 2-oxoglutarate dehydrogenase N-terminus
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16078
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF16078_2-oxoglutarate_dehydrogenase_N-terminus


id: PF16177
description: Acetyl-coenzyme A synthetase N-terminus
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16177
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF16177_Acetyl-coenzyme_A_synthetase_N-terminus


id: PF16197
description: Ketoacyl-synthetase C-terminal extension
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16197
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF16197_Ketoacyl-synthetase_C-terminal_extension


id: PF16198
description: tRNA pseudouridylate synthase B C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16198
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF16198_tRNA_pseudouridylate_synthase_B_C-terminal_domain


id: PF16321
description: Sigma 54 modulation/S30EA ribosomal protein C terminus
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16321
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF16321_Sigma_54_modulation/S30EA_ribosomal_protein_C_terminus


id: PF16327
description: Cytochrome c-type biogenesis protein CcmF C-terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16327
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF16327_Cytochrome_c-type_biogenesis_protein_CcmF_C-terminal


id: PF16350
description: FAD dependent oxidoreductase central domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16350
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF16350_FAD_dependent_oxidoreductase_central_domain


id: PF16576
description: Barrel-sandwich domain of CusB or HlyD membrane-fusion
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16576
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF16576_Barrel-sandwich_domain_of_CusB_or_HlyD_membrane-fusion


id: PF16653
description: Saccharopine dehydrogenase C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16653
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF16653_Saccharopine_dehydrogenase_C-terminal_domain


id: PF16655
description: PhoD-like phosphatase, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16655
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF16655_PhoD-like_phosphatase,_N-terminal_domain


id: PF16658
description: Class II release factor RF3, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16658
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF16658_Class_II_release_factor_RF3,_C-terminal_domain


id: PF16859
description: Tetracyclin repressor-like, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16859
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF16859_Tetracyclin_repressor-like,_C-terminal_domain


id: PF16870
description: 2-oxoglutarate dehydrogenase C-terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16870
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF16870_2-oxoglutarate_dehydrogenase_C-terminal


id: PF16881
description: N-terminal domain of lipoyl synthase of Radical_SAM family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16881
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF16881_N-terminal_domain_of_lipoyl_synthase_of_Radical_SAM_family


id: PF16901
description: C-terminal domain of alpha-glycerophosphate oxidase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16901
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF16901_C-terminal_domain_of_alpha-glycerophosphate_oxidase


id: PF16916
description: Dimerisation domain of Zinc Transporter
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16916
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF16916_Dimerisation_domain_of_Zinc_Transporter


id: PF17092
description: Penicillin-binding protein OB-like domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF17092
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF17092_Penicillin-binding_protein_OB-like_domain


id: PF17167
description: Glycosyl hydrolase 36 superfamily, catalytic domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF17167
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF17167_Glycosyl_hydrolase_36_superfamily,_catalytic_domain


id: PF17432
description: Domain of unknown function (DUF3458_C) ARM repeats
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF17432
name:
  Protein Domains (Pfam).STRING_v12.0_1117943_STRINGid_PF17432_Domain_of_unknown_function_(DUF3458_C)_ARM_repeats


id: SM00044
description: Adenylyl- / guanylyl cyclase, catalytic domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00044
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00044_Adenylyl-_/_guanylyl_cyclase,_catalytic_domain


id: SM00046
description: Diacylglycerol kinase catalytic domain (presumed)
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00046
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00046_Diacylglycerol_kinase_catalytic_domain_(presumed)


id: SM00052
description: Putative diguanylate phosphodiesterase
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00052
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00052_Putative_diguanylate_phosphodiesterase


id: SM00062
description: Bacterial periplasmic substrate-binding proteins
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00062
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00062_Bacterial_periplasmic_substrate-binding_proteins


id: SM00065
description: Domain present in phytochromes and cGMP-specific phosphodiesterases.
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00065
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00065_Domain_present_in_phytochromes_and_cGMP-specific_phosphodiesterases.


id: SM00086
description: Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00086
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00086_Motif_C-terminal_to_PAS_motifs_(likely_to_contribute_to_PAS_structural_domain)


id: SM00100
description: Cyclic nucleotide-monophosphate binding domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00100
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00100_Cyclic_nucleotide-monophosphate_binding_domain


id: SM00116
description: Domain in cystathionine beta-synthase and other proteins.
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00116
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00116_Domain_in_cystathionine_beta-synthase_and_other_proteins.


id: SM00138
description: Methyltransferase, chemotaxis proteins
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00138
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00138_Methyltransferase,_chemotaxis_proteins


id: SM00226
description: Low molecular weight phosphatase family
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00226
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00226_Low_molecular_weight_phosphatase_family


id: SM00228
description: Domain present in PSD-95, Dlg, and ZO-1/2.
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00228
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00228_Domain_present_in_PSD-95,_Dlg,_and_ZO-1/2.


id: SM00260
description: Two component signalling adaptor domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00260
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00260_Two_component_signalling_adaptor_domain


id: SM00271
description: DnaJ molecular chaperone homology domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00271
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00271_DnaJ_molecular_chaperone_homology_domain


id: SM00278
description: Helix-hairpin-helix DNA-binding motif class 1
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00278
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00278_Helix-hairpin-helix_DNA-binding_motif_class_1


id: SM00279
description: Helix-hairpin-helix class 2 (Pol1 family) motifs
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00279
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00279_Helix-hairpin-helix_class_2_(Pol1_family)_motifs


id: SM00283
description: Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00283
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00283_Methyl-accepting_chemotaxis-like_domains_(chemotaxis_sensory_transducer).


id: SM00304
description: HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00304
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00304_HAMP_(Histidine_kinases,_Adenylyl_cyclases,_Methyl_binding_proteins,_Phosphatases)_domain


id: SM00316
description: Ribosomal protein S1-like RNA-binding domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00316
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00316_Ribosomal_protein_S1-like_RNA-binding_domain


id: SM00327
description: Von Willebrand factor (vWF) type A domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00327
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00327_Von_Willebrand_factor_(vWF)_type_A_domain


id: SM00342
description: Helix_turn_helix, arabinose operon control protein
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00342
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00342_Helix_turn_helix,_arabinose_operon_control_protein


id: SM00345
description: Helix_turn_helix gluconate operon transcriptional repressor
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00345
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00345_Helix_turn_helix_gluconate_operon_transcriptional_repressor


id: SM00346
description: Helix_turn_helix isocitrate lyase regulation
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00346
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00346_Helix_turn_helix_isocitrate_lyase_regulation


id: SM00347
description: Helix_turn_helix multiple antibiotic resistance protein
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00347
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00347_Helix_turn_helix_multiple_antibiotic_resistance_protein


id: SM00354
description: Helix_turn _helix lactose operon repressor
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00354
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00354_Helix_turn__helix_lactose_operon_repressor


id: SM00359
description: Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00359
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00359_Putative_RNA-binding_Domain_in_PseudoUridine_synthase_and_Archaeosine_transglycosylase


id: SM00382
description: ATPases associated with a variety of cellular activities
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00382
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00382_ATPases_associated_with_a_variety_of_cellular_activities


id: SM00411
description: Bacterial (prokaryotic) histone like domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00411
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00411_Bacterial_(prokaryotic)_histone_like_domain


id: SM00418
description: Helix_turn_helix, Arsenical Resistance Operon Repressor
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00418
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00418_Helix_turn_helix,_Arsenical_Resistance_Operon_Repressor


id: SM00419
description: Helix_turn_helix, cAMP Regulatory protein
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00419
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00419_Helix_turn_helix,_cAMP_Regulatory_protein


id: SM00420
description: Helix_turn_helix, Deoxyribose operon repressor
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00420
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00420_Helix_turn_helix,_Deoxyribose_operon_repressor


id: SM00436
description: Bacterial DNA topoisomeraes I ATP-binding domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00436
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00436_Bacterial_DNA_topoisomeraes_I_ATP-binding_domain


id: SM00437
description: Bacterial DNA topoisomerase I DNA-binding domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00437
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00437_Bacterial_DNA_topoisomerase_I_DNA-binding_domain


id: SM00460
description: Transglutaminase/protease-like homologues
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00460
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00460_Transglutaminase/protease-like_homologues


id: SM00464
description: Found in ATP-dependent protease La (LON)
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00464
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00464_Found_in_ATP-dependent_protease_La_(LON)


id: SM00471
description: Metal dependent phosphohydrolases with conserved HD motif.
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00471
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00471_Metal_dependent_phosphohydrolases_with_conserved_HD_motif.


id: SM00479
description: Exonuclease domain in DNA-polymerase alpha and epsilon chain, ribonuclease T and other exonucleases
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00479
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00479_Exonuclease_domain_in_DNA-polymerase_alpha_and_epsilon_chain,_ribonuclease_T_and_other_exonucleases


id: SM00481
description: DNA polymerase alpha chain like domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00481
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00481_DNA_polymerase_alpha_chain_like_domain


id: SM00490
description: Helicase superfamily c-terminal domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00490
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00490_Helicase_superfamily_c-terminal_domain


id: SM00493
description: Topoisomerases, DnaG-type primases, OLD family nucleases and RecR proteins
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00493
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00493_Topoisomerases,_DnaG-type_primases,_OLD_family_nucleases_and_RecR_proteins


id: SM00525
description: Iron-sulpphur binding domain in DNA-(apurinic or apyrimidinic site) lyase (subfamily of ENDO3)
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00525
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00525_Iron-sulpphur_binding_domain_in_DNA-(apurinic_or_apyrimidinic_site)_lyase_(subfamily_of_ENDO3)


id: SM00530
description: Helix-turn-helix XRE-family like proteins
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00530
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00530_Helix-turn-helix_XRE-family_like_proteins


id: SM00533
description: DNA-binding domain of DNA mismatch repair MUTS family
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00533
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00533_DNA-binding_domain_of_DNA_mismatch_repair_MUTS_family


id: SM00534
description: ATPase domain of DNA mismatch repair MUTS family
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00534
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00534_ATPase_domain_of_DNA_mismatch_repair_MUTS_family


id: SM00554
description: Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00554
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00554_Four_repeated_domains_in_the_Fasciclin_I_family_of_proteins,_present_in_many_other_contexts.


id: SM00562
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00562
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00562_These_are_enzymes_that_catalyze_nonsubstrate_specific_conversions_of_nucleoside_diphosphates_to_nucleoside_triphosphates._These_enzymes_play_important_roles_in_bacterial_growth,_signal_transduction_and_pathogenicity.

description:
  These are enzymes that catalyze nonsubstrate specific conversions of nucleoside diphosphates to nucleoside triphosphates. These enzymes play important roles in bacterial growth, signal transduction and pathogenicity.


id: SM00729
description: Elongator protein 3, MiaB family, Radical SAM
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00729
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00729_Elongator_protein_3,_MiaB_family,_Radical_SAM


id: SM00732
description: Likely ribonuclease with RNase H fold.
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00732
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00732_Likely_ribonuclease_with_RNase_H_fold.


id: SM00738
description: In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00738
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00738_In_Spt5p,_this_domain_may_confer_affinity_for_Spt4p._It_possesses_a_RNP-like_fold.


id: SM00739
description: KOW (Kyprides, Ouzounis, Woese) motif.
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00739
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00739_KOW_(Kyprides,_Ouzounis,_Woese)_motif.


id: SM00760
description: Bacterial dnaA protein helix-turn-helix domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00760
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00760_Bacterial_dnaA_protein_helix-turn-helix_domain


id: SM00778
description: Zinc-binding domain of primase-helicase
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00778
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00778_Zinc-binding_domain_of_primase-helicase


id: SM00822
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00822
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00822_This_enzymatic_domain_is_part_of_bacterial_polyketide_synthases_and_catalyses_the_first_step_in_the_reductive_modification_of_the_beta-carbonyl_centres_in_the_growing_polyketide_chain._It_uses_NADPH_to_reduce_the_keto_group_to_a_hydroxy_group.

description:
  This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.


id: SM00827
description: Acyl transferase domain in polyketide synthase (PKS) enzymes.
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00827
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00827_Acyl_transferase_domain_in_polyketide_synthase_(PKS)_enzymes.


id: SM00833
description: Cobalamin synthesis protein cobW C-terminal domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00833
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00833_Cobalamin_synthesis_protein_cobW_C-terminal_domain


id: SM00840
description: This DALR domain is found in cysteinyl-tRNA-synthetases.
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00840
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00840_This_DALR_domain_is_found_in_cysteinyl-tRNA-synthetases.


id: SM00843
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00843
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00843_This_domain_directs_oriented_DNA_translocation_and_forms_a_winged_helix_structure._Mutated_proteins_with_substitutions_in_the_FtsK_gamma_DNA-recognition_helix_are_impaired_in_DNA_binding.

description:
  This domain directs oriented DNA translocation and forms a winged helix structure. Mutated proteins with substitutions in the FtsK gamma DNA-recognition helix are impaired in DNA binding.


id: SM00846
description: Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00846
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00846_Glyceraldehyde_3-phosphate_dehydrogenase,_NAD_binding_domain


id: SM00847
description: Helicase associated domain (HA2) Add an annotation
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00847
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00847_Helicase_associated_domain_(HA2)__Add_an_annotation


id: SM00858
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00858
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00858_This_domain_family_includes_a_range_of_different_proteins._Such_as_antifreeze_proteins_and_flagellar_FlgA_proteins,_and_CpaB_pilus_proteins.

description:
  This domain family includes a range of different proteins. Such as antifreeze proteins and flagellar FlgA proteins, and CpaB pilus proteins.


id: SM00859
description: Semialdehyde dehydrogenase, NAD binding domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00859
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00859_Semialdehyde_dehydrogenase,_NAD_binding_domain


id: SM00861
description: Transketolase, pyrimidine binding domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00861
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00861_Transketolase,_pyrimidine_binding_domain


id: SM00862
description: Transcriptional regulatory protein, C terminal
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00862
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00862_Transcriptional_regulatory_protein,_C_terminal


id: SM00863
description: Threonyl and Alanyl tRNA synthetase second additional domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00863
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00863_Threonyl_and_Alanyl_tRNA_synthetase_second_additional_domain


id: SM00865
description: Tubulin/FtsZ family, C-terminal domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00865
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00865_Tubulin/FtsZ_family,_C-terminal_domain


id: SM00866
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00866
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00866_The_UbiC_transcription_regulator-associated_(UTRA)_domain_is_a_conserved_ligand-binding_domain_that_has_a_similar_fold_to_PUBMED:12757941._It_is_believed_to_modulate_activity_of_bacterial_transcription_factors_in_response_to_binding_small_molecules.

description:
  The UbiC transcription regulator-associated (UTRA) domain is a conserved ligand-binding domain that has a similar fold to PUBMED:12757941. It is believed to modulate activity of bacterial transcription factors in response to binding small molecules.


id: SM00871
description: Bacterial transcription activator, effector binding domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00871
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00871_Bacterial_transcription_activator,_effector_binding_domain


id: SM00876
description: Biotin and Thiamin Synthesis associated domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00876
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00876_Biotin_and_Thiamin_Synthesis_associated_domain


id: SM00880
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00880
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00880_The_CHAD_domain_is_an_alpha-helical_domain_functionally_associated_with_some_members_of_the_adenylate_cyclase_family_._It_has_conserved_histidines_that_may_chelate_metals.

description:
  The CHAD domain is an alpha-helical domain functionally associated with some members of the adenylate cyclase family . It has conserved histidines that may chelate metals.


id: SM00895
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00895
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00895_This_entry_represents_the_C-terminal_ligand_binding_domain_of_many_members_of_the_GntR_family._This_domain_probably_binds_to_a_range_of_effector_molecules_that_regulate_the_transcription_of_genes_through_the_action_of_the_N-terminal_DNA-binding_...

description:
  This entry represents the C-terminal ligand binding domain of many members of the GntR family. This domain probably binds to a range of effector molecules that regulate the transcription of genes through the action of the N-terminal DNA-binding ...


id: SM00896
description: Ferredoxin-fold anticodon binding domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00896
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00896_Ferredoxin-fold_anticodon_binding_domain


id: SM00898
description: Formamidopyrimidine-DNA glycosylase N-terminal domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00898
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00898_Formamidopyrimidine-DNA_glycosylase_N-terminal_domain


id: SM00922
description: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00922
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00922_Mandelate_racemase_/_muconate_lactonizing_enzyme,_C-terminal_domain


id: SM00926
description: Molybdopterin oxidoreductase Fe4S4 domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00926
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00926_Molybdopterin_oxidoreductase_Fe4S4_domain


id: SM00928
description: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00928
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00928_NADH-ubiquinone_oxidoreductase-F_iron-sulfur_binding_region


id: SM00929
description: NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00929
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00929_NADH-ubiquinone_oxidoreductase-G_iron-sulfur_binding_region


id: SM00930
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00930
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00930_This_domain_is_found_at_the_C-terminus_of_ABC_transporter_proteins_involved_in_D-methionine_transport_as_well_as_a_number_of_ferredoxin-like_proteins._This_domain_is_likely_to_act_as_a_substrate_binding_domain._The_domain_has_been_named_after_a_...

description:
  This domain is found at the C-terminus of ABC transporter proteins involved in D-methionine transport as well as a number of ferredoxin-like proteins. This domain is likely to act as a substrate binding domain. The domain has been named after a ...


id: SM00934
description: Orotidine 5-phosphate decarboxylase / HUMPS family
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00934
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00934_Orotidine_5-phosphate_decarboxylase_/_HUMPS_family


id: SM00936
description: Penicillin-binding protein 5, C-terminal domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00936
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00936_Penicillin-binding_protein_5,_C-terminal_domain


id: SM00937
description: This domain is found in peptide chain release factors.
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00937
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00937_This_domain_is_found_in_peptide_chain_release_factors.


id: SM00939
description: X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00939
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00939_X-Pro_dipeptidyl-peptidase_C-terminal_non-catalytic_domain


id: SM00941
description: Pyrimidine nucleoside phosphorylase C-terminal domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00941
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00941_Pyrimidine_nucleoside_phosphorylase_C-terminal_domain


id: SM00943
description: Bifunctional DNA primase/polymerase, N-terminal
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00943
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00943_Bifunctional_DNA_primase/polymerase,_N-terminal


id: SM00955
description: This domain is the catalytic domain of ribonuclease II.PUBMED:16806266
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00955
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00955_This_domain_is_the_catalytic_domain_of_ribonuclease_II.PUBMED:16806266


id: SM00956
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00956
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00956_This_DNA-binding_domain_is_found_in_the_RecQ_helicase_among_others_and_has_a_helix-turn-helix_structure._The_RQC_domain,_found_only_in_RecQ_family_enzymes,_is_a_high_affinity_G4_DNA_binding_domain_PUBMED:16530788.

description:
  This DNA-binding domain is found in the RecQ helicase among others and has a helix-turn-helix structure. The RQC domain, found only in RecQ family enzymes, is a high affinity G4 DNA binding domain PUBMED:16530788.


id: SM00959
description: Rho termination factor, N-terminal domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00959
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00959_Rho_termination_factor,_N-terminal_domain


id: SM00963
description: SRP54-type protein, helical bundle domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00963
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00963_SRP54-type_protein,_helical_bundle_domain


id: SM00965
description: Secretin and TonB N terminus short domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00965
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00965_Secretin_and_TonB_N_terminus_short_domain


id: SM00967
description: RNA 2-O ribose methyltransferase substrate binding
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00967
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00967_RNA_2-O_ribose_methyltransferase_substrate_binding


id: SM00974
description: This entry represents the putative helicase A859L PUBMED:11897024.
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00974
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00974_This_entry_represents_the_putative_helicase_A859L_PUBMED:11897024.


id: SM00978
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00978
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00978_Tim44_is_an_essential_component_of_the_machinery_that_mediates_the_translocation_of_nuclear-encoded_proteins_across_the_mitochondrial_inner_membrane_PUBMED:10430866._Tim44_is_thought_to_bind_phospholipids_of_the_mitochondrial_inner_membrane_both_by_...

description:
  Tim44 is an essential component of the machinery that mediates the translocation of nuclear-encoded proteins across the mitochondrial inner membrane PUBMED:10430866. Tim44 is thought to bind phospholipids of the mitochondrial inner membrane both by ...


id: SM00982
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00982
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00982_This_domain_is_found_in_proteins_necessary_for_strand-specific_repair_in_DNA_such_as_TRCF_in_Escherichia_coli._A_lesion_in_the_template_strand_blocks_the_RNA_polymerase_complex_(RNAP)._The_RNAP-DNA-RNA_complex_is_specifically_recognised_by_the_...

description:
  This domain is found in proteins necessary for strand-specific repair in DNA such as TRCF in Escherichia coli. A lesion in the template strand blocks the RNA polymerase complex (RNAP). The RNAP-DNA-RNA complex is specifically recognised by the ...


id: SM00983
description: Thiamin pyrophosphokinase, vitamin B1 binding domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00983
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00983_Thiamin_pyrophosphokinase,_vitamin_B1_binding_domain


id: SM00987
description: UreE urease accessory protein, C-terminal domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00987
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00987_UreE_urease_accessory_protein,_C-terminal_domain


id: SM00988
description: UreE urease accessory protein, N-terminal domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00988
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00988_UreE_urease_accessory_protein,_N-terminal_domain


id: SM00992
description: Hemimethylated DNA-binding protein YccV like
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00992
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00992_Hemimethylated_DNA-binding_protein_YccV_like


id: SM00997
description: S-adenosyl-L-homocysteine hydrolase, NAD binding domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00997
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM00997_S-adenosyl-L-homocysteine_hydrolase,_NAD_binding_domain


id: SM01002
description: Alanine dehydrogenase/PNT, C-terminal domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01002
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM01002_Alanine_dehydrogenase/PNT,_C-terminal_domain


id: SM01003
description: Alanine dehydrogenase/PNT, N-terminal domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01003
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM01003_Alanine_dehydrogenase/PNT,_N-terminal_domain


id: SM01006
description: Siderophore biosynthesis protein domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01006
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM01006_Siderophore_biosynthesis_protein_domain


id: SM01007
description: Class II Aldolase and Adducin N-terminal domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01007
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM01007_Class_II_Aldolase_and_Adducin_N-terminal_domain


id: SM01008
description: Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01008
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM01008_Aldehyde_oxidase_and_xanthine_dehydrogenase,_a/b_hammerhead_domain


id: SM01016
description: Arginyl tRNA synthetase N terminal dom
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01016
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM01016_Arginyl_tRNA_synthetase_N_terminal_dom


id: SM01043
description: Bacterial transcriptional activator domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01043
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM01043_Bacterial_transcriptional_activator_domain


id: SM01049
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01049
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM01049_Cache_is_an_extracellular_domain_that_is_predicted_to_have_a_role_in_small-molecule_recognition_in_a_wide_range_of_proteins,_including_the_animal_dihydropyridine-sensitive_voltage-gated_Ca2+_channel

description:
  Cache is an extracellular domain that is predicted to have a role in small-molecule recognition in a wide range of proteins, including the animal dihydropyridine-sensitive voltage-gated Ca2+ channel


id: SM01079
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01079
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM01079_This_domain_is_found_in_the_extracellular_portion_of_receptor-like_proteins_-_such_as_serine/threonine_kinases_and_adenylyl_cyclases_PUBMED:11590000,_PUBMED:11590001._Predicted_to_be_a_ligand_binding_domain_PUBMED:11590000.

description:
  This domain is found in the extracellular portion of receptor-like proteins - such as serine/threonine kinases and adenylyl cyclases PUBMED:11590000, PUBMED:11590001. Predicted to be a ligand binding domain PUBMED:11590000.


id: SM01080
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01080
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM01080_CHASE2_is_an_extracellular_sensory_domain,_which_is_present_in_various_classes_of_transmembrane_receptors_that_are_parts_of_signal_transduction_pathways_in_bacteria._Specifically,_CHASE2_domains_are_found_in_histidine_kinases,_adenylate_cyclases,_...

description:
  CHASE2 is an extracellular sensory domain, which is present in various classes of transmembrane receptors that are parts of signal transduction pathways in bacteria. Specifically, CHASE2 domains are found in histidine kinases, adenylate cyclases, ...


id: SM01086
description: C-terminal, D2-small domain, of ClpB protein
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01086
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM01086_C-terminal,_D2-small_domain,_of_ClpB_protein


id: SM01092
description: CO dehydrogenase flavoprotein C-terminal domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01092
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM01092_CO_dehydrogenase_flavoprotein_C-terminal_domain


id: SM01096
description: Carbamoyl-phosphate synthetase large chain, oligomerisation domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01096
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM01096_Carbamoyl-phosphate_synthetase_large_chain,_oligomerisation_domain


id: SM01097
description: Carbamoyl-phosphate synthase small chain, CPSase domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01097
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM01097_Carbamoyl-phosphate_synthase_small_chain,_CPSase_domain


id: SM01118
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01118
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM01118_These_sequences_are_functionally_identified_as_members_of_the_adenylate_cyclase_family,_which_catalyses_the_conversion_of_ATP_to_3,5-cyclic_AMP_and_pyrophosphate._Six_distinct_non-homologous_classes_of_AC_have_been_identified._The_structure_of_...

description:
  These sequences are functionally identified as members of the adenylate cyclase family, which catalyses the conversion of ATP to 3,5-cyclic AMP and pyrophosphate. Six distinct non-homologous classes of AC have been identified. The structure of ...


id: SM01120
description: This domain is the predicted phosphatase domain of the dihydroxyacetone kinase family.
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01120
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM01120_This_domain_is_the_predicted_phosphatase_domain_of_the_dihydroxyacetone_kinase_family.


id: SM01150
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01150
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM01150_This_domain_is_found_in_a_variety_of_bacterial_and_fungal_hypothetical_proteins_of_unknown_function._The_structure_of_this_domain_has_been_solved_by_structural_genomics._The_structure_implies_a_zinc-binding_function,_so_it_is_a_putative_metal_...

description:
  This domain is found in a variety of bacterial and fungal hypothetical proteins of unknown function. The structure of this domain has been solved by structural genomics. The structure implies a zinc-binding function, so it is a putative metal ...


id: SM01209
description: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01209
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM01209_Phosphoribosylglycinamide_synthetase,_ATP-grasp_(A)_domain


id: SM01210
description: Phosphoribosylglycinamide synthetase, C domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01210
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM01210_Phosphoribosylglycinamide_synthetase,_C_domain


id: SM01211
description: CobB/CobQ-like glutamine amidotransferase domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01211
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM01211_CobB/CobQ-like_glutamine_amidotransferase_domain


id: SM01230
description: Glutamine synthetase, catalytic domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01230
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM01230_Glutamine_synthetase,_catalytic_domain


id: SM01231
description: Signal transducing histidine kinase, homodimeric domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01231
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM01231_Signal_transducing_histidine_kinase,_homodimeric_domain


id: SM01232
description: Formamidopyrimidine-DNA glycosylase H2TH domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01232
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM01232_Formamidopyrimidine-DNA_glycosylase_H2TH_domain


id: SM01234
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01234
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM01234_This_domain_has_haemolytic_activity_(PMID:19306042)._It_is_found_in_short_(73-103_amino_acid)_proteins_and_contains_three_conserved_cysteine_residues.

description:
  This domain has haemolytic activity (PMID:19306042). It is found in short (73-103 amino acid) proteins and contains three conserved cysteine residues.


id: SM01329
description: Isocitrate/isopropylmalate dehydrogenase
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01329
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM01329_Isocitrate/isopropylmalate_dehydrogenase


id: SM01340
description: DNA mismatch repair protein, C-terminal domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01340
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM01340_DNA_mismatch_repair_protein,_C-terminal_domain


id: SM01350
description: 6-phosphogluconate dehydrogenase, C-terminal domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01350
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM01350_6-phosphogluconate_dehydrogenase,_C-terminal_domain


id: SM01382
description: Ribosomal Proteins L2, C-terminal domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01382
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM01382_Ribosomal_Proteins_L2,_C-terminal_domain


id: SM01383
description: Ribosomal Proteins L2, RNA binding domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01383
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM01383_Ribosomal_Proteins_L2,_RNA_binding_domain


id: SM01390
description: Ribosomal protein S4/S9 N-terminal domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01390
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM01390_Ribosomal_protein_S4/S9_N-terminal_domain


id: SM01400
description: N-terminal domain of ribose phosphate pyrophosphokinase
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01400
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM01400_N-terminal_domain_of_ribose_phosphate_pyrophosphokinase


id: SM01477
description: DDE transposase retroviral integrase sub-family
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01477
name:
  Protein Domains (SMART).STRING_v12.0_1117943_STRINGid_SM01477_DDE_transposase_retroviral_integrase_sub-family


