# geneInfo

ensembl_gene_id: SAMN02746089_00008
symbol: SHE29790.1
gene_biotype: protein_coding
description:
  Dinuclear metal center protein, YbgI/SA1388 family; Belongs to the GTP cyclohydrolase I type 2/NIF3 family.


ensembl_gene_id: SAMN02746089_00013
symbol: sigA
gene_biotype: protein_coding
description:
  RNA polymerase, sigma 70 subunit, RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.


ensembl_gene_id: SAMN02746089_00014
symbol: dnaG
gene_biotype: protein_coding
description:
  DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.


ensembl_gene_id: SAMN02746089_00016
symbol: glyQS
gene_biotype: protein_coding
description:
  glycyl-tRNA synthetase; Catalyzes the attachment of glycine to tRNA(Gly). Belongs to the class-II aminoacyl-tRNA synthetase family.


ensembl_gene_id: SAMN02746089_00020
symbol: era
gene_biotype: protein_coding
description:
  GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.


ensembl_gene_id: SAMN02746089_00022
symbol: ybeY
gene_biotype: protein_coding
description:
  Probable rRNA maturation factor; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.


ensembl_gene_id: SAMN02746089_00030
symbol: SHE30673.1
gene_biotype: protein_coding
description:
  16S rRNA (uracil1498-N3)-methyltransferase; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.


ensembl_gene_id: SAMN02746089_00031
symbol: prmA
gene_biotype: protein_coding
description:
  Ribosomal protein L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family.


ensembl_gene_id: SAMN02746089_00032
symbol: dnaJ
gene_biotype: protein_coding
description:
  Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...]


ensembl_gene_id: SAMN02746089_00034
symbol: grpE
gene_biotype: protein_coding
description:
  Molecular chaperone GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP [...]


ensembl_gene_id: SAMN02746089_00035
symbol: hrcA
gene_biotype: protein_coding
description:
  Heat-inducible transcription repressor HrcA; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons.


ensembl_gene_id: SAMN02746089_00036
symbol: SHE31091.1
gene_biotype: protein_coding
description:
  Oxygen-independent coproporphyrinogen-3 oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: SAMN02746089_00037
symbol: lepA
gene_biotype: protein_coding
description:
  GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.


ensembl_gene_id: SAMN02746089_00040
symbol: gpr
gene_biotype: protein_coding
description:
  Spore protease; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.


ensembl_gene_id: SAMN02746089_00049
symbol: ilvE
gene_biotype: protein_coding
description:
  Branched-chain amino acid aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: SAMN02746089_00052
symbol: ldh
gene_biotype: protein_coding
description:
  L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family.


ensembl_gene_id: SAMN02746089_00054
symbol: SHE32295.1
gene_biotype: protein_coding
description:
  Phosphotransferase system, enzyme I, PtsI; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr).


ensembl_gene_id: SAMN02746089_00055
symbol: SHE32348.1
gene_biotype: protein_coding
description:
  Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: SAMN02746089_00056
symbol: lspA
gene_biotype: protein_coding
description:
  Signal peptidase II; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.


ensembl_gene_id: SAMN02746089_00060
symbol: cas1
gene_biotype: protein_coding
description:
  CRISPR-associated protein, Cas1 family; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.


ensembl_gene_id: SAMN02746089_00061
symbol: SHE32610.1
gene_biotype: protein_coding
description:
  CRISPR-associated exonuclease Cas4; CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Belongs to the CRISPR-associated exonuclease Cas4 family.


ensembl_gene_id: SAMN02746089_00066
symbol: cas2
gene_biotype: protein_coding
description:
  CRISPR-associated protein Cas2; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.


ensembl_gene_id: SAMN02746089_00067
symbol: SHE32912.1
gene_biotype: protein_coding
description:
  CRISPR-associated endoribonuclease Cas6; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA).


ensembl_gene_id: SAMN02746089_00097
symbol: SHE34345.1
gene_biotype: protein_coding
description:
  Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: SAMN02746089_00112
symbol: obg
gene_biotype: protein_coding
description:
  GTP-binding protein; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.


ensembl_gene_id: SAMN02746089_00116
symbol: rplU
gene_biotype: protein_coding
description:
  LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.


ensembl_gene_id: SAMN02746089_00117
symbol: SHE35239.1
gene_biotype: protein_coding
description:
  Dihydrofolate synthase / folylpolyglutamate synthase; Belongs to the folylpolyglutamate synthase family.


ensembl_gene_id: SAMN02746089_00119
symbol: valS
gene_biotype: protein_coding
description:
  valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.


ensembl_gene_id: SAMN02746089_00124
symbol: zwf
gene_biotype: protein_coding
description:
  Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.


ensembl_gene_id: SAMN02746089_00126
symbol: SHE35609.1
gene_biotype: protein_coding
description:
  CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: SAMN02746089_00137
symbol: lon
gene_biotype: protein_coding
description:
  ATP-dependent Lon protease; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.


ensembl_gene_id: SAMN02746089_00139
symbol: clpX
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.


ensembl_gene_id: SAMN02746089_00140
symbol: clpP
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease proteolytic subunit ClpP; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: SAMN02746089_00141
symbol: tig
gene_biotype: protein_coding
description:
  Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.


ensembl_gene_id: SAMN02746089_00162
symbol: SHE37234.1
gene_biotype: protein_coding
description:
  Adenosylhomocysteine nucleosidase; Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'- methylthioribose and S-ribosylhomocysteine, respectively. Belongs to the PNP/UDP phosphorylase family. MtnN subfamily.


ensembl_gene_id: SAMN02746089_00163
symbol: ileS
gene_biotype: protein_coding
description:
  Isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily.


ensembl_gene_id: SAMN02746089_00169
symbol: sepF
gene_biotype: protein_coding
description:
  Cell division inhibitor SepF; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA.


ensembl_gene_id: SAMN02746089_00170
symbol: SHE37507.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.


ensembl_gene_id: SAMN02746089_00173
symbol: SHE37597.1
gene_biotype: protein_coding
description:
  Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.


ensembl_gene_id: SAMN02746089_00174
symbol: plsY
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate acyltransferase PlsY; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.


ensembl_gene_id: SAMN02746089_00175
symbol: der
gene_biotype: protein_coding
description:
  GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.


ensembl_gene_id: SAMN02746089_00182
symbol: pstB
gene_biotype: protein_coding
description:
  Phosphate ABC transporter ATP-binding protein, PhoT family; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.


ensembl_gene_id: SAMN02746089_00184
symbol: SHE38053.1
gene_biotype: protein_coding
description:
  Phosphate ABC transporter membrane protein 1, PhoT family (TC 3.A.1.7.1); Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: SAMN02746089_00187
symbol: nrdR
gene_biotype: protein_coding
description:
  Transcriptional repressor NrdR; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family.


ensembl_gene_id: SAMN02746089_00189
symbol: SHE38266.1
gene_biotype: protein_coding
description:
  RNA polymerase, sigma subunit, RpsG/SigG; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: SAMN02746089_00190
symbol: SHE38301.1
gene_biotype: protein_coding
description:
  RNA polymerase, sigma 29 subunit, SigE; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: SAMN02746089_00191
symbol: SHE38340.1
gene_biotype: protein_coding
description:
  Stage II sporulation protein GA (sporulation sigma-E factor processing peptidase); Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family.


ensembl_gene_id: SAMN02746089_00192
symbol: ftsZ
gene_biotype: protein_coding
description:
  Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.


ensembl_gene_id: SAMN02746089_00193
symbol: ftsA
gene_biotype: protein_coding
description:
  Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.


ensembl_gene_id: SAMN02746089_00198
symbol: murD
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.


ensembl_gene_id: SAMN02746089_00199
symbol: mraY
gene_biotype: protein_coding
description:
  Phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.


ensembl_gene_id: SAMN02746089_00200
symbol: murF
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.


ensembl_gene_id: SAMN02746089_00201
symbol: murE
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily.


ensembl_gene_id: SAMN02746089_00204
symbol: rsmH
gene_biotype: protein_coding
description:
  16S rRNA (cytosine1402-N4)-methyltransferase; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.


ensembl_gene_id: SAMN02746089_00210
symbol: SHE39163.1
gene_biotype: protein_coding
description:
  Isocitrate dehydrogenase (NADP); Belongs to the isocitrate and isopropylmalate dehydrogenases family.


ensembl_gene_id: SAMN02746089_00214
symbol: ychF
gene_biotype: protein_coding
description:
  Hypothetical protein; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.


ensembl_gene_id: SAMN02746089_00224
symbol: lgt
gene_biotype: protein_coding
description:
  Phosphatidylglycerol:prolipoprotein diacylglycerol transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.


ensembl_gene_id: SAMN02746089_00226
symbol: smpB
gene_biotype: protein_coding
description:
  SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...]


ensembl_gene_id: SAMN02746089_00229
symbol: SHE40021.1
gene_biotype: protein_coding
description:
  methylated-DNA-[protein]-cysteine S-methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated.


ensembl_gene_id: SAMN02746089_00231
symbol: SHE40124.1
gene_biotype: protein_coding
description:
  Zinc transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family.


ensembl_gene_id: SAMN02746089_00249
symbol: SHE40974.1
gene_biotype: protein_coding
description:
  phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).


ensembl_gene_id: SAMN02746089_00251
symbol: SHE41078.1
gene_biotype: protein_coding
description:
  Indolepyruvate ferredoxin oxidoreductase alpha subunit; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates.


ensembl_gene_id: SAMN02746089_00256
symbol: trpA
gene_biotype: protein_coding
description:
  Tryptophan synthase, alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.


ensembl_gene_id: SAMN02746089_00257
symbol: trpB
gene_biotype: protein_coding
description:
  Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.


ensembl_gene_id: SAMN02746089_00260
symbol: trpD
gene_biotype: protein_coding
description:
  Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).


ensembl_gene_id: SAMN02746089_00262
symbol: trpE
gene_biotype: protein_coding
description:
  Anthranilate synthase component 1; Part of a heterotetrameric complex that catalyzes the two- step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine-binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentr [...]


ensembl_gene_id: SAMN02746089_00274
symbol: nanE
gene_biotype: protein_coding
description:
  N-acylglucosamine-6-phosphate 2-epimerase; Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N- acetylglucosamine-6-phosphate (GlcNAc-6-P).


ensembl_gene_id: SAMN02746089_00287
symbol: pyrR
gene_biotype: protein_coding
description:
  Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant; Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrR subfamily.


ensembl_gene_id: SAMN02746089_00289
symbol: pyrB
gene_biotype: protein_coding
description:
  Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.


ensembl_gene_id: SAMN02746089_00290
symbol: pyrC
gene_biotype: protein_coding
description:
  Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.


ensembl_gene_id: SAMN02746089_00294
symbol: pyrK
gene_biotype: protein_coding
description:
  Dihydroorotate oxidase B, electron transfer subunit; Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD(+).


ensembl_gene_id: SAMN02746089_00296
symbol: pyrE
gene_biotype: protein_coding
description:
  Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).


ensembl_gene_id: SAMN02746089_00317
symbol: ruvC
gene_biotype: protein_coding
description:
  Holliday junction endonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.


ensembl_gene_id: SAMN02746089_00318
symbol: ruvA
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase subunit RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.


ensembl_gene_id: SAMN02746089_00319
symbol: ruvB
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase subunit RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.


ensembl_gene_id: SAMN02746089_00322
symbol: queA
gene_biotype: protein_coding
description:
  S-adenosylmethionine--tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).


ensembl_gene_id: SAMN02746089_00323
symbol: tgt
gene_biotype: protein_coding
description:
  Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form t [...]


ensembl_gene_id: SAMN02746089_00327
symbol: secD
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: SAMN02746089_00328
symbol: secF
gene_biotype: protein_coding
description:
  Protein translocase subunit secF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: SAMN02746089_00332
symbol: apt
gene_biotype: protein_coding
description:
  Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.


ensembl_gene_id: SAMN02746089_00333
symbol: SHE49654.1
gene_biotype: protein_coding
description:
  GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.


ensembl_gene_id: SAMN02746089_00335
symbol: aspS
gene_biotype: protein_coding
description:
  aspartyl-tRNA synthetase; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor end of tRNA(Asp). Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.


ensembl_gene_id: SAMN02746089_00347
symbol: iscS
gene_biotype: protein_coding
description:
  Cysteine desulfurase; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily.


ensembl_gene_id: SAMN02746089_00349
symbol: mnmA
gene_biotype: protein_coding
description:
  tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.


ensembl_gene_id: SAMN02746089_00353
symbol: alaS
gene_biotype: protein_coding
description:
  alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.


ensembl_gene_id: SAMN02746089_00355
symbol: SHE50559.1
gene_biotype: protein_coding
description:
  Putative holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.


ensembl_gene_id: SAMN02746089_00358
symbol: rnj
gene_biotype: protein_coding
description:
  Ribonuclease J; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay.


ensembl_gene_id: SAMN02746089_00359
symbol: SHE50738.1
gene_biotype: protein_coding
description:
  UPF0342 protein SAMN02746089_00359; Cell fate regulator YlbF, YheA/YmcA/DUF963 family (controls sporulation, competence, biofilm development); Belongs to the UPF0342 family.


ensembl_gene_id: SAMN02746089_00360
symbol: mltG
gene_biotype: protein_coding
description:
  UPF0755 protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family.


ensembl_gene_id: SAMN02746089_00363
symbol: SHE50918.1
gene_biotype: protein_coding
description:
  RNA polymerase, sigma 27/28 subunit, RpsK/SigK; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: SAMN02746089_00365
symbol: aroE
gene_biotype: protein_coding
description:
  Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).


ensembl_gene_id: SAMN02746089_00382
symbol: aroK
gene_biotype: protein_coding
description:
  Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.


ensembl_gene_id: SAMN02746089_00384
symbol: proB
gene_biotype: protein_coding
description:
  Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.


ensembl_gene_id: SAMN02746089_00385
symbol: proA
gene_biotype: protein_coding
description:
  Glutamate-5-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.


ensembl_gene_id: SAMN02746089_00386
symbol: aroQ
gene_biotype: protein_coding
description:
  3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.


ensembl_gene_id: SAMN02746089_00388
symbol: efp
gene_biotype: protein_coding
description:
  Elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.


ensembl_gene_id: SAMN02746089_00400
symbol: nusB
gene_biotype: protein_coding
description:
  NusB antitermination factor; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.


ensembl_gene_id: SAMN02746089_00401
symbol: folD
gene_biotype: protein_coding
description:
  Methylenetetrahydrofolate dehydrogenase (NADP+); Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.


ensembl_gene_id: SAMN02746089_00402
symbol: xseA
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.


ensembl_gene_id: SAMN02746089_00403
symbol: xseB
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.


ensembl_gene_id: SAMN02746089_00407
symbol: dxs
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.


ensembl_gene_id: SAMN02746089_00409
symbol: nadK
gene_biotype: protein_coding
description:
  NAD+ kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.


ensembl_gene_id: SAMN02746089_00411
symbol: SHE53084.1
gene_biotype: protein_coding
description:
  DNA repair protein RecN (Recombination protein N); May be involved in recombinational repair of damaged DNA.


ensembl_gene_id: SAMN02746089_00413
symbol: SHE53179.1
gene_biotype: protein_coding
description:
  Two-component system, response regulator, stage 0 sporulation protein A; May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process.


ensembl_gene_id: SAMN02746089_00418
symbol: SHE53404.1
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase.


ensembl_gene_id: SAMN02746089_00424
symbol: SHE53689.1
gene_biotype: protein_coding
description:
  D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family.


ensembl_gene_id: SAMN02746089_00426
symbol: spoIIAB
gene_biotype: protein_coding
description:
  Stage II sporulation protein AB (anti-sigma F factor); Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition.


ensembl_gene_id: SAMN02746089_00427
symbol: SHE53834.1
gene_biotype: protein_coding
description:
  RNA polymerase, sigma subunit, RpoX/SigF; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: SAMN02746089_00434
symbol: scpA
gene_biotype: protein_coding
description:
  Condensin subunit ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: SAMN02746089_00435
symbol: SHE54216.1
gene_biotype: protein_coding
description:
  Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: SAMN02746089_00441
symbol: SHE54480.1
gene_biotype: protein_coding
description:
  Ribosomal large subunit pseudouridine synthase B; Belongs to the pseudouridine synthase RsuA family.


ensembl_gene_id: SAMN02746089_00442
symbol: speE
gene_biotype: protein_coding
description:
  Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.


ensembl_gene_id: SAMN02746089_00451
symbol: ispH
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.


ensembl_gene_id: SAMN02746089_00453
symbol: speH
gene_biotype: protein_coding
description:
  Adenosylmethionine decarboxylase proenzyme; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the prokaryotic AdoMetDC family. Type 1 subfamily.


ensembl_gene_id: SAMN02746089_00471
symbol: SHE58467.1
gene_biotype: protein_coding
description:
  L-threonylcarbamoyladenylate synthase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.


ensembl_gene_id: SAMN02746089_00472
symbol: SHE58519.1
gene_biotype: protein_coding
description:
  Protein-tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.


ensembl_gene_id: SAMN02746089_00474
symbol: upp
gene_biotype: protein_coding
description:
  Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.


ensembl_gene_id: SAMN02746089_00477
symbol: SHE58771.1
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing); Belongs to the UDP-N-acetylglucosamine 2-epimerase family.


ensembl_gene_id: SAMN02746089_00483
symbol: murA
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.


ensembl_gene_id: SAMN02746089_00497
symbol: fabZ
gene_biotype: protein_coding
description:
  3-hydroxyacyl-[acyl-carrier-protein] dehydratase; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.


ensembl_gene_id: SAMN02746089_00509
symbol: SHE60354.1
gene_biotype: protein_coding
description:
  D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: SAMN02746089_00511
symbol: rplY
gene_biotype: protein_coding
description:
  LSU ribosomal protein L25P; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.


ensembl_gene_id: SAMN02746089_00512
symbol: lysA
gene_biotype: protein_coding
description:
  Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.


ensembl_gene_id: SAMN02746089_00521
symbol: recD2
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease V alpha subunit; DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity; Belongs to the RecD family. RecD-like subfamily.


ensembl_gene_id: SAMN02746089_00530
symbol: SHE61504.1
gene_biotype: protein_coding
description:
  Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.


ensembl_gene_id: SAMN02746089_00538
symbol: hpf
gene_biotype: protein_coding
description:
  SSU ribosomal protein S30P/sigma 54 modulation protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.


ensembl_gene_id: SAMN02746089_00539
symbol: secA
gene_biotype: protein_coding
description:
  Protein translocase subunit secA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family.


ensembl_gene_id: SAMN02746089_00540
symbol: prfB
gene_biotype: protein_coding
description:
  Bacterial peptide chain release factor 2 (bRF-2); Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.


ensembl_gene_id: SAMN02746089_00541
symbol: rnfC
gene_biotype: protein_coding
description:
  Electron transport complex protein RnfC; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily.


ensembl_gene_id: SAMN02746089_00542
symbol: rnfD
gene_biotype: protein_coding
description:
  Electron transport complex protein RnfD; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family.


ensembl_gene_id: SAMN02746089_00543
symbol: rnfG
gene_biotype: protein_coding
description:
  Electron transport complex protein RnfG; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the RnfG family.


ensembl_gene_id: SAMN02746089_00544
symbol: rnfE
gene_biotype: protein_coding
description:
  Electron transport complex protein RnfE; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.


ensembl_gene_id: SAMN02746089_00545
symbol: rnfA
gene_biotype: protein_coding
description:
  Electron transport complex protein RnfA; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.


ensembl_gene_id: SAMN02746089_00546
symbol: rnfB
gene_biotype: protein_coding
description:
  Electron transport complex, RnfABCDGE type, B subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.


ensembl_gene_id: SAMN02746089_00557
symbol: SHE62907.1
gene_biotype: protein_coding
description:
  Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.


ensembl_gene_id: SAMN02746089_00571
symbol: SHE63634.1
gene_biotype: protein_coding
description:
  Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.


ensembl_gene_id: SAMN02746089_00574
symbol: SHE63777.1
gene_biotype: protein_coding
description:
  tRNA-U20-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.


ensembl_gene_id: SAMN02746089_00576
symbol: tyrS
gene_biotype: protein_coding
description:
  tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily.


ensembl_gene_id: SAMN02746089_00590
symbol: SHE66585.1
gene_biotype: protein_coding
description:
  ATP-binding cassette, subfamily B (MDR/TAP), member 1/ATP-binding cassette, subfamily B/ATP-binding cassette, subfamily B, MsbA.


ensembl_gene_id: SAMN02746089_00603
symbol: nadE
gene_biotype: protein_coding
description:
  NAD+ synthase (glutamine-hydrolysing); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.


ensembl_gene_id: SAMN02746089_00604
symbol: trpS
gene_biotype: protein_coding
description:
  tryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: SAMN02746089_00621
symbol: SHE68025.1
gene_biotype: protein_coding
description:
  Fur family transcriptional regulator, peroxide stress response regulator; Belongs to the Fur family.


ensembl_gene_id: SAMN02746089_00646
symbol: aroC
gene_biotype: protein_coding
description:
  Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.


ensembl_gene_id: SAMN02746089_00649
symbol: polA
gene_biotype: protein_coding
description:
  DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.


ensembl_gene_id: SAMN02746089_00650
symbol: coaE
gene_biotype: protein_coding
description:
  dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.


ensembl_gene_id: SAMN02746089_00657
symbol: kdpA
gene_biotype: protein_coding
description:
  K+-transporting ATPase ATPase A chain; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane.


ensembl_gene_id: SAMN02746089_00658
symbol: kdpB
gene_biotype: protein_coding
description:
  K+-transporting ATPase ATPase B chain; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system. Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IA subfamily.


ensembl_gene_id: SAMN02746089_00659
symbol: kdpC
gene_biotype: protein_coding
description:
  K+-transporting ATPase ATPase C chain; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP-binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB/KdpC/ATP ternary complex.


ensembl_gene_id: SAMN02746089_00677
symbol: SHE70583.1
gene_biotype: protein_coding
description:
  Uncharacterized protein, PH0010 family/AmmeMemoRadiSam system protein A/AmmeMemoRadiSam system protein B.


ensembl_gene_id: SAMN02746089_00680
symbol: dacA
gene_biotype: protein_coding
description:
  Diadenylate cyclase; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria.


ensembl_gene_id: SAMN02746089_00689
symbol: glmM
gene_biotype: protein_coding
description:
  Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.


ensembl_gene_id: SAMN02746089_00691
symbol: glmS
gene_biotype: protein_coding
description:
  Glucosamine--fructose-6-phosphate aminotransferase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.


ensembl_gene_id: SAMN02746089_00698
symbol: SHE73716.1
gene_biotype: protein_coding
description:
  Riboflavin transporter FmnP; Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins; Belongs to the prokaryotic riboflavin transporter (P-RFT) (TC 2.A.87) family.


ensembl_gene_id: SAMN02746089_00702
symbol: SHE73921.1
gene_biotype: protein_coding
description:
  [SSU ribosomal protein S18P]-alanine acetyltransferase; Acetylates the N-terminal alanine of ribosomal protein S18.


ensembl_gene_id: SAMN02746089_00704
symbol: tsaD
gene_biotype: protein_coding
description:
  N6-L-threonylcarbamoyladenine synthase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.


ensembl_gene_id: SAMN02746089_00705
symbol: SHE74071.1
gene_biotype: protein_coding
description:
  Phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: SAMN02746089_00707
symbol: ribH
gene_biotype: protein_coding
description:
  6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.


ensembl_gene_id: SAMN02746089_00708
symbol: ribBA
gene_biotype: protein_coding
description:
  3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.


ensembl_gene_id: SAMN02746089_00710
symbol: SHE74304.1
gene_biotype: protein_coding
description:
  Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.


ensembl_gene_id: SAMN02746089_00712
symbol: rex
gene_biotype: protein_coding
description:
  Redox-sensing transcriptional repressor; Modulates transcription in response to changes in cellular NADH/NAD(+) redox state.


ensembl_gene_id: SAMN02746089_00722
symbol: ndk
gene_biotype: protein_coding
description:
  Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.


ensembl_gene_id: SAMN02746089_00724
symbol: SHE74894.1
gene_biotype: protein_coding
description:
  5,10-methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.


ensembl_gene_id: SAMN02746089_00726
symbol: murJ
gene_biotype: protein_coding
description:
  Putative peptidoglycan lipid II flippase; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.


ensembl_gene_id: SAMN02746089_00731
symbol: SHE75209.1
gene_biotype: protein_coding
description:
  23S rRNA (uracil-5-)-methyltransferase RumA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.


ensembl_gene_id: SAMN02746089_00732
symbol: rnz
gene_biotype: protein_coding
description:
  Ribonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family.


ensembl_gene_id: SAMN02746089_00736
symbol: luxS
gene_biotype: protein_coding
description:
  S-ribosylhomocysteine lyase /quorum-sensing autoinducer 2 (AI-2) synthesis protein LuxS; Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5-dihydroxy-2,3-pentadione (DPD). Belongs to the LuxS family.


ensembl_gene_id: SAMN02746089_00755
symbol: hypA
gene_biotype: protein_coding
description:
  Hydrogenase nickel incorporation protein HypA/HybF; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.


ensembl_gene_id: SAMN02746089_00761
symbol: rho
gene_biotype: protein_coding
description:
  Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.


ensembl_gene_id: SAMN02746089_00764
symbol: prmC
gene_biotype: protein_coding
description:
  Release factor glutamine methyltransferase; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.


ensembl_gene_id: SAMN02746089_00769
symbol: rnmV
gene_biotype: protein_coding
description:
  Ribonuclease M5; Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step.


ensembl_gene_id: SAMN02746089_00770
symbol: rsmA
gene_biotype: protein_coding
description:
  16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.


ensembl_gene_id: SAMN02746089_00773
symbol: SHE76934.1
gene_biotype: protein_coding
description:
  DNA-binding protein HU-beta; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.


ensembl_gene_id: SAMN02746089_00787
symbol: SHE77375.1
gene_biotype: protein_coding
description:
  Acetaldehyde dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.


ensembl_gene_id: SAMN02746089_00792
symbol: SHE77586.1
gene_biotype: protein_coding
description:
  Pyruvate-ferredoxin/flavodoxin oxidoreductase; Belongs to the pyruvate:ferredoxin/flavodoxin oxidoreductase family.


ensembl_gene_id: SAMN02746089_00793
symbol: ku
gene_biotype: protein_coding
description:
  DNA end-binding protein Ku; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.


ensembl_gene_id: SAMN02746089_00804
symbol: atpA
gene_biotype: protein_coding
description:
  V/A-type H+-transporting ATPase subunit A; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.


ensembl_gene_id: SAMN02746089_00805
symbol: atpB
gene_biotype: protein_coding
description:
  V/A-type H+-transporting ATPase subunit B; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit.


ensembl_gene_id: SAMN02746089_00806
symbol: atpD
gene_biotype: protein_coding
description:
  V/A-type H+-transporting ATPase subunit D; Produces ATP from ADP in the presence of a proton gradient across the membrane.


ensembl_gene_id: SAMN02746089_00809
symbol: SHE78363.1
gene_biotype: protein_coding
description:
  23S rRNA pseudouridine1911/1915/1917 synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: SAMN02746089_00825
symbol: rsfS
gene_biotype: protein_coding
description:
  Ribosome-associated protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.


ensembl_gene_id: SAMN02746089_00828
symbol: nadD
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).


ensembl_gene_id: SAMN02746089_00853
symbol: thiI
gene_biotype: protein_coding
description:
  Thiamine biosynthesis protein ThiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS.


ensembl_gene_id: SAMN02746089_00886
symbol: pnp
gene_biotype: protein_coding
description:
  Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.


ensembl_gene_id: SAMN02746089_00887
symbol: rpsO
gene_biotype: protein_coding
description:
  SSU ribosomal protein S15P; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.


ensembl_gene_id: SAMN02746089_00889
symbol: truB
gene_biotype: protein_coding
description:
  tRNA pseudouridine55 synthase; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.


ensembl_gene_id: SAMN02746089_00891
symbol: rbfA
gene_biotype: protein_coding
description:
  Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.


ensembl_gene_id: SAMN02746089_00892
symbol: infB
gene_biotype: protein_coding
description:
  Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.


ensembl_gene_id: SAMN02746089_00896
symbol: rimP
gene_biotype: protein_coding
description:
  Ribosome maturation factor RimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.


ensembl_gene_id: SAMN02746089_00900
symbol: SHE84488.1
gene_biotype: protein_coding
description:
  Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.


ensembl_gene_id: SAMN02746089_00901
symbol: thrS
gene_biotype: protein_coding
description:
  threonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr).


ensembl_gene_id: SAMN02746089_00914
symbol: prfA
gene_biotype: protein_coding
description:
  Bacterial peptide chain release factor 1 (bRF-1); Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.


ensembl_gene_id: SAMN02746089_00917
symbol: metG
gene_biotype: protein_coding
description:
  methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.


ensembl_gene_id: SAMN02746089_00921
symbol: rsmI
gene_biotype: protein_coding
description:
  16S rRNA (cytidine1402-2'-O)-methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.


ensembl_gene_id: SAMN02746089_00925
symbol: SHE87444.1
gene_biotype: protein_coding
description:
  Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like/2,3-diketo-5-methylthio-1-phosphopentane phosphatase.


ensembl_gene_id: SAMN02746089_00926
symbol: SHE87494.1
gene_biotype: protein_coding
description:
  Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.


ensembl_gene_id: SAMN02746089_00931
symbol: tmk
gene_biotype: protein_coding
description:
  dTMP kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.


ensembl_gene_id: SAMN02746089_00937
symbol: murG
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine-N- acetylmuramylpentapeptide N-acetylglucosamine transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.


ensembl_gene_id: SAMN02746089_00946
symbol: nagB
gene_biotype: protein_coding
description:
  Glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion.


ensembl_gene_id: SAMN02746089_00963
symbol: recR
gene_biotype: protein_coding
description:
  DNA replication and repair protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.


ensembl_gene_id: SAMN02746089_00964
symbol: SHE89159.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.


ensembl_gene_id: SAMN02746089_00965
symbol: dnaX
gene_biotype: protein_coding
description:
  DNA polymerase-3 subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: SAMN02746089_00970
symbol: tadA
gene_biotype: protein_coding
description:
  tRNA(adenine34) deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: SAMN02746089_00974
symbol: SHE89514.1
gene_biotype: protein_coding
description:
  Amino acid ABC transporter substrate-binding protein, PAAT family; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: SAMN02746089_00983
symbol: rlmH
gene_biotype: protein_coding
description:
  23S rRNA (pseudouridine1915-N3)-methyltransferase; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.


ensembl_gene_id: SAMN02746089_01009
symbol: mutS2
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS2; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.


ensembl_gene_id: SAMN02746089_01011
symbol: SHE92632.1
gene_biotype: protein_coding
description:
  Cell division protein ZapA; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.


ensembl_gene_id: SAMN02746089_01013
symbol: pheT
gene_biotype: protein_coding
description:
  phenylalanyl-tRNA synthetase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.


ensembl_gene_id: SAMN02746089_01014
symbol: pheS
gene_biotype: protein_coding
description:
  phenylalanyl-tRNA synthetase, alpha subunit; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.


ensembl_gene_id: SAMN02746089_01015
symbol: SHE92794.1
gene_biotype: protein_coding
description:
  RNA methyltransferase, TrmH family; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: SAMN02746089_01018
symbol: rplT
gene_biotype: protein_coding
description:
  LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.


ensembl_gene_id: SAMN02746089_01020
symbol: SHE93038.1
gene_biotype: protein_coding
description:
  Bacterial translation initiation factor 3 (bIF-3); IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.


ensembl_gene_id: SAMN02746089_01023
symbol: polC
gene_biotype: protein_coding
description:
  DNA polymerase-3 subunit alpha; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: SAMN02746089_01025
symbol: ispG
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family.


ensembl_gene_id: SAMN02746089_01027
symbol: dxr
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family.


ensembl_gene_id: SAMN02746089_01029
symbol: SHE93470.1
gene_biotype: protein_coding
description:
  Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.


ensembl_gene_id: SAMN02746089_01030
symbol: frr
gene_biotype: protein_coding
description:
  Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.


ensembl_gene_id: SAMN02746089_01032
symbol: tsf
gene_biotype: protein_coding
description:
  Translation elongation factor Ts (EF-Ts); Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.


ensembl_gene_id: SAMN02746089_01036
symbol: cheD
gene_biotype: protein_coding
description:
  Chemotaxis protein CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.


ensembl_gene_id: SAMN02746089_01043
symbol: flhA
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.


ensembl_gene_id: SAMN02746089_01044
symbol: flhB
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family.


ensembl_gene_id: SAMN02746089_01045
symbol: SHE94224.1
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family.


ensembl_gene_id: SAMN02746089_01046
symbol: fliQ
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.


ensembl_gene_id: SAMN02746089_01047
symbol: fliP
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.


ensembl_gene_id: SAMN02746089_01052
symbol: SHE94577.1
gene_biotype: protein_coding
description:
  Flagellar FliL protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.


ensembl_gene_id: SAMN02746089_01064
symbol: SHE95133.1
gene_biotype: protein_coding
description:
  Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.


ensembl_gene_id: SAMN02746089_01067
symbol: SHE95274.1
gene_biotype: protein_coding
description:
  Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.


ensembl_gene_id: SAMN02746089_01068
symbol: codY
gene_biotype: protein_coding
description:
  Transcriptional pleiotropic repressor; DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor; Belongs to the CodY family.


ensembl_gene_id: SAMN02746089_01069
symbol: hslU
gene_biotype: protein_coding
description:
  ATP-dependent HslUV protease ATP-binding subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis.


ensembl_gene_id: SAMN02746089_01070
symbol: hslV
gene_biotype: protein_coding
description:
  ATP dependent peptidase CodWX, CodW component. Threonine peptidase. MEROPS family T01B; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery.


ensembl_gene_id: SAMN02746089_01071
symbol: topA
gene_biotype: protein_coding
description:
  DNA topoisomerase-1; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]


ensembl_gene_id: SAMN02746089_01095
symbol: SHE97942.1
gene_biotype: protein_coding
description:
  Amino acid/amide ABC transporter membrane protein 1, HAAT family; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: SAMN02746089_01096
symbol: SHE97990.1
gene_biotype: protein_coding
description:
  Amino acid/amide ABC transporter membrane protein 2, HAAT family; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: SAMN02746089_01107
symbol: atpB-2
gene_biotype: protein_coding
description:
  ATP synthase F0 subcomplex A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.


ensembl_gene_id: SAMN02746089_01108
symbol: atpE
gene_biotype: protein_coding
description:
  ATP synthase F0 subcomplex C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: SAMN02746089_01109
symbol: atpF
gene_biotype: protein_coding
description:
  F-type H+-transporting ATPase subunit b; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.


ensembl_gene_id: SAMN02746089_01110
symbol: atpH
gene_biotype: protein_coding
description:
  F-type H+-transporting ATPase subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: SAMN02746089_01111
symbol: atpA-2
gene_biotype: protein_coding
description:
  F-type H+-transporting ATPase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.


ensembl_gene_id: SAMN02746089_01112
symbol: atpG
gene_biotype: protein_coding
description:
  F-type H+-transporting ATPase subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.


ensembl_gene_id: SAMN02746089_01113
symbol: atpD-2
gene_biotype: protein_coding
description:
  ATP synthase F1 subcomplex beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.


ensembl_gene_id: SAMN02746089_01114
symbol: atpC
gene_biotype: protein_coding
description:
  F-type H+-transporting ATPase subunit epsilon; Produces ATP from ADP in the presence of a proton gradient across the membrane.


ensembl_gene_id: SAMN02746089_01119
symbol: groS
gene_biotype: protein_coding
description:
  Chaperonin GroES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.


ensembl_gene_id: SAMN02746089_01120
symbol: groL
gene_biotype: protein_coding
description:
  Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.


ensembl_gene_id: SAMN02746089_01139
symbol: thiE
gene_biotype: protein_coding
description:
  Thiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.


ensembl_gene_id: SAMN02746089_01140
symbol: thiM
gene_biotype: protein_coding
description:
  Hydroxyethylthiazole kinase; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family.


ensembl_gene_id: SAMN02746089_01160
symbol: pepT
gene_biotype: protein_coding
description:
  Tripeptide aminopeptidase; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family.


ensembl_gene_id: SAMN02746089_01170
symbol: SHF02130.1
gene_biotype: protein_coding
description:
  Cation diffusion facilitator family transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.


ensembl_gene_id: SAMN02746089_01172
symbol: SHF02224.1
gene_biotype: protein_coding
description:
  Septum formation protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.


ensembl_gene_id: SAMN02746089_01178
symbol: minC
gene_biotype: protein_coding
description:
  Septum site-determining protein MinC; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family.


ensembl_gene_id: SAMN02746089_01180
symbol: SHF02611.1
gene_biotype: protein_coding
description:
  Cell division topological specificity factor; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell.


ensembl_gene_id: SAMN02746089_01181
symbol: rodA
gene_biotype: protein_coding
description:
  Cell elongation-specific peptidoglycan biosynthesis regulator RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.


ensembl_gene_id: SAMN02746089_01188
symbol: rimO
gene_biotype: protein_coding
description:
  SSU ribosomal protein S12P methylthiotransferase; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.


ensembl_gene_id: SAMN02746089_01191
symbol: recA
gene_biotype: protein_coding
description:
  Recombination protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.


ensembl_gene_id: SAMN02746089_01200
symbol: lexA
gene_biotype: protein_coding
description:
  Repressor LexA; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair.


ensembl_gene_id: SAMN02746089_01202
symbol: uppP
gene_biotype: protein_coding
description:
  Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.


ensembl_gene_id: SAMN02746089_01210
symbol: proC
gene_biotype: protein_coding
description:
  Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.


ensembl_gene_id: SAMN02746089_01211
symbol: hfq
gene_biotype: protein_coding
description:
  RNA-binding protein Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family.


ensembl_gene_id: SAMN02746089_01212
symbol: miaA
gene_biotype: protein_coding
description:
  tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.


ensembl_gene_id: SAMN02746089_01213
symbol: mutL
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.


ensembl_gene_id: SAMN02746089_01214
symbol: mutS
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.


ensembl_gene_id: SAMN02746089_01215
symbol: miaB
gene_biotype: protein_coding
description:
  tRNA-2-methylthio-N6-dimethylallyladenosine synthase; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.


ensembl_gene_id: SAMN02746089_01225
symbol: mprF
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms.


ensembl_gene_id: SAMN02746089_01232
symbol: cbiM
gene_biotype: protein_coding
description:
  Cobalt/nickel transport system permease protein; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import.


ensembl_gene_id: SAMN02746089_01233
symbol: cbiN
gene_biotype: protein_coding
description:
  Cobalt/nickel transport protein; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import; Belongs to the CbiN family.


ensembl_gene_id: SAMN02746089_01235
symbol: SHF06695.1
gene_biotype: protein_coding
description:
  Cobalt/nickel transport system ATP-binding protein; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.


ensembl_gene_id: SAMN02746089_01239
symbol: hemC
gene_biotype: protein_coding
description:
  Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.


ensembl_gene_id: SAMN02746089_01240
symbol: hemA
gene_biotype: protein_coding
description:
  glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).


ensembl_gene_id: SAMN02746089_01247
symbol: cbiD
gene_biotype: protein_coding
description:
  Cobalt-precorrin 5B C1-methyltransferase; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A.


ensembl_gene_id: SAMN02746089_01252
symbol: cobS
gene_biotype: protein_coding
description:
  Cobalamin-5'-phosphate synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.


ensembl_gene_id: SAMN02746089_01254
symbol: cobD
gene_biotype: protein_coding
description:
  Adenosylcobinamide-phosphate synthase; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.


ensembl_gene_id: SAMN02746089_01255
symbol: cobQ
gene_biotype: protein_coding
description:
  Adenosylcobyric acid synthase (glutamine-hydrolysing); Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.


ensembl_gene_id: SAMN02746089_01256
symbol: cbiA
gene_biotype: protein_coding
description:
  Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.


ensembl_gene_id: SAMN02746089_01258
symbol: SHF07736.1
gene_biotype: protein_coding
description:
  Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: SAMN02746089_01262
symbol: nth
gene_biotype: protein_coding
description:
  DNA-(apurinic or apyrimidinic site) lyase; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.


ensembl_gene_id: SAMN02746089_01272
symbol: rplM
gene_biotype: protein_coding
description:
  LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.


ensembl_gene_id: SAMN02746089_01273
symbol: truA
gene_biotype: protein_coding
description:
  tRNA pseudouridine38-40 synthase; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.


ensembl_gene_id: SAMN02746089_01274
symbol: ecfT
gene_biotype: protein_coding
description:
  Energy-coupling factor transport system permease protein; Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.


ensembl_gene_id: SAMN02746089_01275
symbol: ecfA
gene_biotype: protein_coding
description:
  Energy-coupling factor transport system ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.


ensembl_gene_id: SAMN02746089_01278
symbol: rpoA
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: SAMN02746089_01279
symbol: rpsD
gene_biotype: protein_coding
description:
  SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.


ensembl_gene_id: SAMN02746089_01280
symbol: rpsK
gene_biotype: protein_coding
description:
  SSU ribosomal protein S11P; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.


ensembl_gene_id: SAMN02746089_01281
symbol: rpsM
gene_biotype: protein_coding
description:
  SSU ribosomal protein S13P; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.


ensembl_gene_id: SAMN02746089_01282
symbol: infA
gene_biotype: protein_coding
description:
  Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.


ensembl_gene_id: SAMN02746089_01284
symbol: map
gene_biotype: protein_coding
description:
  Methionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.


ensembl_gene_id: SAMN02746089_01285
symbol: adk
gene_biotype: protein_coding
description:
  Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.


ensembl_gene_id: SAMN02746089_01286
symbol: secY
gene_biotype: protein_coding
description:
  Protein translocase subunit secY/sec61 alpha; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.


ensembl_gene_id: SAMN02746089_01287
symbol: rplO
gene_biotype: protein_coding
description:
  LSU ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.


ensembl_gene_id: SAMN02746089_01289
symbol: rpsE
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.


ensembl_gene_id: SAMN02746089_01290
symbol: rplR
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.


ensembl_gene_id: SAMN02746089_01291
symbol: rplF
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.


ensembl_gene_id: SAMN02746089_01292
symbol: rpsH
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.


ensembl_gene_id: SAMN02746089_01293
symbol: rpsZ
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.


ensembl_gene_id: SAMN02746089_01294
symbol: rplE
gene_biotype: protein_coding
description:
  LSU ribosomal protein L5P; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.


ensembl_gene_id: SAMN02746089_01295
symbol: rplX
gene_biotype: protein_coding
description:
  LSU ribosomal protein L24P; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.


ensembl_gene_id: SAMN02746089_01296
symbol: rplN
gene_biotype: protein_coding
description:
  LSU ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.


ensembl_gene_id: SAMN02746089_01297
symbol: rpsQ
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.


ensembl_gene_id: SAMN02746089_01299
symbol: rplP
gene_biotype: protein_coding
description:
  LSU ribosomal protein L16P; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.


ensembl_gene_id: SAMN02746089_01300
symbol: rpsC
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.


ensembl_gene_id: SAMN02746089_01301
symbol: rplV
gene_biotype: protein_coding
description:
  LSU ribosomal protein L22P; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.


ensembl_gene_id: SAMN02746089_01302
symbol: rpsS
gene_biotype: protein_coding
description:
  SSU ribosomal protein S19P; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.


ensembl_gene_id: SAMN02746089_01303
symbol: rplB
gene_biotype: protein_coding
description:
  LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.


ensembl_gene_id: SAMN02746089_01304
symbol: rplW
gene_biotype: protein_coding
description:
  LSU ribosomal protein L23P; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.


ensembl_gene_id: SAMN02746089_01306
symbol: rplC
gene_biotype: protein_coding
description:
  LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.


ensembl_gene_id: SAMN02746089_01307
symbol: rpsJ
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.


ensembl_gene_id: SAMN02746089_01308
symbol: tuf
gene_biotype: protein_coding
description:
  Translation elongation factor 1A (EF-1A/EF-Tu); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.


ensembl_gene_id: SAMN02746089_01312
symbol: SHF11220.1
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.


ensembl_gene_id: SAMN02746089_01333
symbol: tilS
gene_biotype: protein_coding
description:
  tRNA(Ile)-lysidine synthase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.


ensembl_gene_id: SAMN02746089_01334
symbol: SHF12175.1
gene_biotype: protein_coding
description:
  Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.


ensembl_gene_id: SAMN02746089_01335
symbol: ftsH
gene_biotype: protein_coding
description:
  Cell division protease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family.  In the central section; belongs to the AAA ATPase family.


ensembl_gene_id: SAMN02746089_01341
symbol: SHF12510.1
gene_biotype: protein_coding
description:
  Sodium pump decarboxylases, gamma subunit; Catalyzes the decarboxylation of oxaloacetate coupled to Na(+) translocation; Belongs to the OadG family.


ensembl_gene_id: SAMN02746089_01343
symbol: SHF12612.1
gene_biotype: protein_coding
description:
  glutaconyl-CoA decarboxylase beta subunit; Tunnel subunit of the primary sodium pump glutaconyl-CoA decarboxylase (GCD).


ensembl_gene_id: SAMN02746089_01345
symbol: birA
gene_biotype: protein_coding
description:
  Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.


ensembl_gene_id: SAMN02746089_01347
symbol: coaX
gene_biotype: protein_coding
description:
  Type III pantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.


ensembl_gene_id: SAMN02746089_01348
symbol: SHF12828.1
gene_biotype: protein_coding
description:
  Beta-aspartyl-dipeptidase (metallo-type); Catalyzes the hydrolytic cleavage of a subset of L- isoaspartyl (L-beta-aspartyl) dipeptides. Used to degrade proteins damaged by L-isoaspartyl residues formation. Belongs to the peptidase M38 family.


ensembl_gene_id: SAMN02746089_01349
symbol: SHF12866.1
gene_biotype: protein_coding
description:
  Transcriptional antiterminator NusG; Participates in transcription elongation, termination and antitermination.


ensembl_gene_id: SAMN02746089_01352
symbol: pth
gene_biotype: protein_coding
description:
  peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.


ensembl_gene_id: SAMN02746089_01354
symbol: mfd
gene_biotype: protein_coding
description:
  Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.


ensembl_gene_id: SAMN02746089_01355
symbol: prsA
gene_biotype: protein_coding
description:
  Foldase protein PrsA; Plays a major role in protein secretion by helping the post- translocational extracellular folding of several secreted proteins.


ensembl_gene_id: SAMN02746089_01360
symbol: ispE
gene_biotype: protein_coding
description:
  4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.


ensembl_gene_id: SAMN02746089_01384
symbol: SHF15303.1
gene_biotype: protein_coding
description:
  XTP/dITP diphosphohydrolase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.


ensembl_gene_id: SAMN02746089_01385
symbol: rph
gene_biotype: protein_coding
description:
  RNAse PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation.


ensembl_gene_id: SAMN02746089_01389
symbol: SHF15515.1
gene_biotype: protein_coding
description:
  Chaperonin GroES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter; Belongs to the GroES chaperonin family.


ensembl_gene_id: SAMN02746089_01400
symbol: lipA
gene_biotype: protein_coding
description:
  Lipoic acid synthetase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.


ensembl_gene_id: SAMN02746089_01401
symbol: lipB
gene_biotype: protein_coding
description:
  Lipoyl(octanoyl) transferase; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate.


ensembl_gene_id: SAMN02746089_01404
symbol: crcB
gene_biotype: protein_coding
description:
  Camphor resistance protein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.


ensembl_gene_id: SAMN02746089_01424
symbol: ppa
gene_biotype: protein_coding
description:
  Inorganic pyrophosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.


ensembl_gene_id: SAMN02746089_01443
symbol: azoR
gene_biotype: protein_coding
description:
  FMN-dependent NADH-azoreductase; Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family.


ensembl_gene_id: SAMN02746089_01455
symbol: SHF19380.1
gene_biotype: protein_coding
description:
  RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: SAMN02746089_01460
symbol: bpsA
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in the biosynthesis of branched-chain polyamines, which support the growth of thermophiles under high-temperature conditions. Catalyzes the sequential condensation of spermidine with the aminopropyl groups of decarboxylated S-adenosylmethionines to produce N(4)-bis(aminopropyl)spermidine via N(4)-aminopropylspermidine.


ensembl_gene_id: SAMN02746089_01462
symbol: queE
gene_biotype: protein_coding
description:
  7-carboxy-7-deazaguanine synthase; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds.


ensembl_gene_id: SAMN02746089_01463
symbol: queC
gene_biotype: protein_coding
description:
  7-cyano-7-deazaguanine synthase; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)).


ensembl_gene_id: SAMN02746089_01466
symbol: SHF19845.1
gene_biotype: protein_coding
description:
  Threonine dehydratase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA.


ensembl_gene_id: SAMN02746089_01468
symbol: SHF19931.1
gene_biotype: protein_coding
description:
  Predicted component of the ribosome quality control (RQC) complex, YloA/Tae2 family, contains fibronectin-binding (FbpA) and DUF814 domains.


ensembl_gene_id: SAMN02746089_01469
symbol: dapF
gene_biotype: protein_coding
description:
  Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.


ensembl_gene_id: SAMN02746089_01472
symbol: rpoZ
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.


ensembl_gene_id: SAMN02746089_01473
symbol: SHF20122.1
gene_biotype: protein_coding
description:
  Phosphopantothenate-cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.


ensembl_gene_id: SAMN02746089_01474
symbol: priA
gene_biotype: protein_coding
description:
  Replication restart DNA helicase PriA; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.


ensembl_gene_id: SAMN02746089_01475
symbol: def
gene_biotype: protein_coding
description:
  Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.


ensembl_gene_id: SAMN02746089_01476
symbol: fmt
gene_biotype: protein_coding
description:
  methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.


ensembl_gene_id: SAMN02746089_01479
symbol: SHF20364.1
gene_biotype: protein_coding
description:
  16S rRNA (cytosine967-C5)-methyltransferase; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.


ensembl_gene_id: SAMN02746089_01480
symbol: rlmN
gene_biotype: protein_coding
description:
  23S rRNA m(2)A-2503 methyltransferase; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family.


ensembl_gene_id: SAMN02746089_01483
symbol: rsgA
gene_biotype: protein_coding
description:
  Ribosome biogenesis GTPase; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.


ensembl_gene_id: SAMN02746089_01488
symbol: recG
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.


ensembl_gene_id: SAMN02746089_01491
symbol: coaD
gene_biotype: protein_coding
description:
  Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.


ensembl_gene_id: SAMN02746089_01493
symbol: tmcAL
gene_biotype: protein_coding
description:
  Predicted nucleotidyltransferase; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of elongator tRNA(Met), using acetate and ATP as substrates. First activates an acetate ion to form acetyladenylate (Ac- AMP) and then transfers the acetyl group to tRNA to form ac(4)C34.


ensembl_gene_id: SAMN02746089_01495
symbol: ackA
gene_biotype: protein_coding
description:
  Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.


ensembl_gene_id: SAMN02746089_01499
symbol: SHF21175.1
gene_biotype: protein_coding
description:
  Fatty acid synthesis protein; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.


ensembl_gene_id: SAMN02746089_01559
symbol: guaB
gene_biotype: protein_coding
description:
  IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.


ensembl_gene_id: SAMN02746089_01563
symbol: purE
gene_biotype: protein_coding
description:
  5-(carboxyamino)imidazole ribonucleotide mutase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).


ensembl_gene_id: SAMN02746089_01565
symbol: purS
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to assist in  [...]


ensembl_gene_id: SAMN02746089_01566
symbol: purQ
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase subunit I; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to  [...]


ensembl_gene_id: SAMN02746089_01567
symbol: purL
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase subunit II; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to [...]


ensembl_gene_id: SAMN02746089_01568
symbol: purF
gene_biotype: protein_coding
description:
  Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.


ensembl_gene_id: SAMN02746089_01570
symbol: purN
gene_biotype: protein_coding
description:
  Phosphoribosylglycinamide formyltransferase-1; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.


ensembl_gene_id: SAMN02746089_01582
symbol: metN
gene_biotype: protein_coding
description:
  D-methionine transport system ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.


ensembl_gene_id: SAMN02746089_01587
symbol: amj
gene_biotype: protein_coding
description:
  Protein of unknown function; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.


ensembl_gene_id: SAMN02746089_01590
symbol: glyA
gene_biotype: protein_coding
description:
  Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.


ensembl_gene_id: SAMN02746089_01594
symbol: gltX
gene_biotype: protein_coding
description:
  glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.


ensembl_gene_id: SAMN02746089_01595
symbol: SHF26877.1
gene_biotype: protein_coding
description:
  Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.


ensembl_gene_id: SAMN02746089_01630
symbol: ddl
gene_biotype: protein_coding
description:
  D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.


ensembl_gene_id: SAMN02746089_01636
symbol: pyrG
gene_biotype: protein_coding
description:
  CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.


ensembl_gene_id: SAMN02746089_01648
symbol: SHF29759.1
gene_biotype: protein_coding
description:
  Beta-fructofuranosidase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.


ensembl_gene_id: SAMN02746089_01653
symbol: SHF29953.1
gene_biotype: protein_coding
description:
  solute:Na+ symporter, SSS family; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.


ensembl_gene_id: SAMN02746089_01657
symbol: ilvC
gene_biotype: protein_coding
description:
  Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate.


ensembl_gene_id: SAMN02746089_01658
symbol: leuA
gene_biotype: protein_coding
description:
  2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily.


ensembl_gene_id: SAMN02746089_01659
symbol: leuC
gene_biotype: protein_coding
description:
  3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.


ensembl_gene_id: SAMN02746089_01660
symbol: leuD
gene_biotype: protein_coding
description:
  3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 2 subfamily.


ensembl_gene_id: SAMN02746089_01661
symbol: leuB
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.


ensembl_gene_id: SAMN02746089_01667
symbol: pckG
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate carboxykinase (GTP); Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle; Belongs to the phosphoenolpyruvate carboxykinase [GTP] family.


ensembl_gene_id: SAMN02746089_01669
symbol: nadA
gene_biotype: protein_coding
description:
  Quinolinate synthetase; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.


ensembl_gene_id: SAMN02746089_01672
symbol: greA
gene_biotype: protein_coding
description:
  Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.


ensembl_gene_id: SAMN02746089_01676
symbol: gyrA
gene_biotype: protein_coding
description:
  DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: SAMN02746089_01677
symbol: gyrB
gene_biotype: protein_coding
description:
  DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: SAMN02746089_01679
symbol: recF
gene_biotype: protein_coding
description:
  DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family.


ensembl_gene_id: SAMN02746089_01681
symbol: SHF31791.1
gene_biotype: protein_coding
description:
  DNA polymerase-3 subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...]


ensembl_gene_id: SAMN02746089_01682
symbol: dnaA
gene_biotype: protein_coding
description:
  Chromosomal replication initiator protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.


ensembl_gene_id: SAMN02746089_01683
symbol: rnpA
gene_biotype: protein_coding
description:
  Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.


ensembl_gene_id: SAMN02746089_01686
symbol: mnmE
gene_biotype: protein_coding
description:
  tRNA modification GTPase; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.


ensembl_gene_id: SAMN02746089_01687
symbol: mnmG
gene_biotype: protein_coding
description:
  tRNA uridine 5-carboxymethylaminomethyl modification enzyme; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.


ensembl_gene_id: SAMN02746089_01688
symbol: rsmG
gene_biotype: protein_coding
description:
  16S rRNA m(7)G-527 methyltransferase; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.


ensembl_gene_id: SAMN02746089_01704
symbol: SHF32771.1
gene_biotype: protein_coding
description:
  Single-strand binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.


ensembl_gene_id: SAMN02746089_01705
symbol: rpsR
gene_biotype: protein_coding
description:
  SSU ribosomal protein S18P; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.


ensembl_gene_id: SAMN02746089_01707
symbol: SHF32882.1
gene_biotype: protein_coding
description:
  c-di-AMP phosphodiesterase, consists of a GGDEF-like and DHH domains; Has phosphodiesterase (PDE) activity against cyclic-di-AMP (c-di-AMP); Belongs to the GdpP/PdeA phosphodiesterase family.


ensembl_gene_id: SAMN02746089_01709
symbol: SHF32966.1
gene_biotype: protein_coding
description:
  Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.


ensembl_gene_id: SAMN02746089_01723
symbol: glmU
gene_biotype: protein_coding
description:
  Glucosamine-1-phosphate N-acetyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain.


ensembl_gene_id: SAMN02746089_01724
symbol: prs
gene_biotype: protein_coding
description:
  Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.


ensembl_gene_id: SAMN02746089_01726
symbol: queF
gene_biotype: protein_coding
description:
  7-cyano-7-deazaguanine reductase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1). Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily.


ensembl_gene_id: SAMN02746089_01727
symbol: pcp
gene_biotype: protein_coding
description:
  Pyroglutamyl-peptidase I. Cysteine peptidase. MEROPS family C15; Removes 5-oxoproline from various penultimate amino acid residues except L-proline; Belongs to the peptidase C15 family.


ensembl_gene_id: SAMN02746089_01745
symbol: pdxS
gene_biotype: protein_coding
description:
  Pyridoxal phosphate synthase yaaD subunit; Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5- phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively. Belongs to the PdxS/SNZ family.


ensembl_gene_id: SAMN02746089_01746
symbol: pdxT
gene_biotype: protein_coding
description:
  5'-phosphate synthase pdxT subunit; Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS.


ensembl_gene_id: SAMN02746089_01752
symbol: pfkA
gene_biotype: protein_coding
description:
  6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.


ensembl_gene_id: SAMN02746089_01766
symbol: hppA
gene_biotype: protein_coding
description:
  K(+)-stimulated pyrophosphate-energized sodium pump; Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na(+) movement across the membrane. Belongs to the H(+)-translocating pyrophosphatase (TC 3.A.10) family. K(+)-stimulated subfamily.


ensembl_gene_id: SAMN02746089_01768
symbol: hprK
gene_biotype: protein_coding
description:
  Hpr(Ser) kinase/phosphatase; Catalyzes the ATP- as well as the pyrophosphate-dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK/P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P-Ser-HPr). The two antagonistic activities of HprK/P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable car [...]


ensembl_gene_id: SAMN02746089_01769
symbol: uvrC
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.


ensembl_gene_id: SAMN02746089_01799
symbol: hisZ
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase regulatory subunit; Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine.


ensembl_gene_id: SAMN02746089_01800
symbol: hisG
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Short subfamily.


ensembl_gene_id: SAMN02746089_01801
symbol: hisD
gene_biotype: protein_coding
description:
  Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.


ensembl_gene_id: SAMN02746089_01802
symbol: hisC
gene_biotype: protein_coding
description:
  Histidinol phosphate aminotransferase apoenzyme; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.


ensembl_gene_id: SAMN02746089_01804
symbol: hisH
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase subunit hisH; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.


ensembl_gene_id: SAMN02746089_01805
symbol: hisA
gene_biotype: protein_coding
description:
  1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase.


ensembl_gene_id: SAMN02746089_01806
symbol: hisF
gene_biotype: protein_coding
description:
  Cyclase; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.


ensembl_gene_id: SAMN02746089_01819
symbol: SHF38819.1
gene_biotype: protein_coding
description:
  CRISPR-associated exonuclease, Cas4 family; CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Belongs to the CRISPR-associated exonuclease Cas4 family.


ensembl_gene_id: SAMN02746089_01820
symbol: cas1-2
gene_biotype: protein_coding
description:
  CRISP-associated protein Cas1; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.


ensembl_gene_id: SAMN02746089_01838
symbol: tal
gene_biotype: protein_coding
description:
  Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.


ensembl_gene_id: SAMN02746089_01864
symbol: aroA
gene_biotype: protein_coding
description:
  3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.


ensembl_gene_id: SAMN02746089_01931
symbol: tpx
gene_biotype: protein_coding
description:
  Thiol peroxidase, atypical 2-Cys peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.


ensembl_gene_id: SAMN02746089_01962
symbol: SHF46451.1
gene_biotype: protein_coding
description:
  Putrescine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: SAMN02746089_01963
symbol: SHF46497.1
gene_biotype: protein_coding
description:
  Ribonucleoside-diphosphate reductase class II; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.


ensembl_gene_id: SAMN02746089_01964
symbol: SHF46531.1
gene_biotype: protein_coding
description:
  CopG family transcriptional regulator, nickel-responsive regulator; Transcriptional regulator; Belongs to the transcriptional regulatory CopG/NikR family.


ensembl_gene_id: SAMN02746089_01975
symbol: radA
gene_biotype: protein_coding
description:
  DNA repair protein RadA/Sms; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.


ensembl_gene_id: SAMN02746089_01979
symbol: ispD
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP).


ensembl_gene_id: SAMN02746089_01981
symbol: ispF
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP).


ensembl_gene_id: SAMN02746089_01982
symbol: proS
gene_biotype: protein_coding
description:
  prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves dea [...]


ensembl_gene_id: SAMN02746089_01986
symbol: mrnC
gene_biotype: protein_coding
description:
  Ribonuclease-3 family protein; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family.


ensembl_gene_id: SAMN02746089_01987
symbol: SHF47423.1
gene_biotype: protein_coding
description:
  Thymidylate synthase (FAD); Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant.


ensembl_gene_id: SAMN02746089_01988
symbol: SHF47456.1
gene_biotype: protein_coding
description:
  23S rRNA (guanosine2251-2'-O)-methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: SAMN02746089_01996
symbol: mntH
gene_biotype: protein_coding
description:
  Manganese transport protein; H(+)-stimulated, divalent metal cation uptake system. Belongs to the NRAMP family.


ensembl_gene_id: SAMN02746089_02017
symbol: rbsK
gene_biotype: protein_coding
description:
  Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.


ensembl_gene_id: SAMN02746089_02050
symbol: SHF50585.1
gene_biotype: protein_coding
description:
  Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.


ensembl_gene_id: SAMN02746089_02068
symbol: SHF51741.1
gene_biotype: protein_coding
description:
  UDP-N-acetyl-D-glucosamine dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.


ensembl_gene_id: SAMN02746089_02077
symbol: SHF52015.1
gene_biotype: protein_coding
description:
  NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC.


ensembl_gene_id: SAMN02746089_02127
symbol: gatB
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily.


ensembl_gene_id: SAMN02746089_02128
symbol: gatA
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).


ensembl_gene_id: SAMN02746089_02129
symbol: gatC
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.


ensembl_gene_id: SAMN02746089_02130
symbol: ligA
gene_biotype: protein_coding
description:
  DNA ligase (NAD+); DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA; Belongs to the NAD-dependent DNA ligase family. LigA subfamily.


ensembl_gene_id: SAMN02746089_02132
symbol: SHF54427.1
gene_biotype: protein_coding
description:
  Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.


ensembl_gene_id: SAMN02746089_02170
symbol: SHF56556.1
gene_biotype: protein_coding
description:
  Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.


ensembl_gene_id: SAMN02746089_02186
symbol: rnr
gene_biotype: protein_coding
description:
  Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.


ensembl_gene_id: SAMN02746089_02188
symbol: SHF57791.1
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.


ensembl_gene_id: SAMN02746089_02189
symbol: eno
gene_biotype: protein_coding
description:
  Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.


ensembl_gene_id: SAMN02746089_02190
symbol: gpmI
gene_biotype: protein_coding
description:
  Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.


ensembl_gene_id: SAMN02746089_02191
symbol: tpiA
gene_biotype: protein_coding
description:
  Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.


ensembl_gene_id: SAMN02746089_02193
symbol: SHF58001.1
gene_biotype: protein_coding
description:
  Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: SAMN02746089_02197
symbol: pckA
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate carboxykinase (ATP); Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA.


ensembl_gene_id: SAMN02746089_02218
symbol: purA
gene_biotype: protein_coding
description:
  Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.


ensembl_gene_id: SAMN02746089_02233
symbol: SHF60638.1
gene_biotype: protein_coding
description:
  Thiazole-phosphate synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.


ensembl_gene_id: SAMN02746089_02236
symbol: thiE-2
gene_biotype: protein_coding
description:
  Thiamine-phosphate diphosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.


ensembl_gene_id: SAMN02746089_02244
symbol: SHF61077.1
gene_biotype: protein_coding
description:
  Chromosome partitioning ATPase, Mrp family, contains Fe-S cluster; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.


ensembl_gene_id: SAMN02746089_02255
symbol: SHF61480.1
gene_biotype: protein_coding
description:
  Beta-galactosidase trimerisation domain-containing protein; Belongs to the glycosyl hydrolase 35 family.


ensembl_gene_id: SAMN02746089_02264
symbol: metK
gene_biotype: protein_coding
description:
  Methionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.


ensembl_gene_id: SAMN02746089_02265
symbol: SHF62417.1
gene_biotype: protein_coding
description:
  RNA polymerase sporulation-specific sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: SAMN02746089_02271
symbol: metXA
gene_biotype: protein_coding
description:
  Homoserine O-acetyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine.


ensembl_gene_id: SAMN02746089_02279
symbol: lolD
gene_biotype: protein_coding
description:
  Putative ABC transport system ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.


ensembl_gene_id: SAMN02746089_02315
symbol: dapH
gene_biotype: protein_coding
description:
  2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase; Catalyzes the transfer of an acetyl group from acetyl-CoA to tetrahydrodipicolinate.


ensembl_gene_id: SAMN02746089_02316
symbol: dapB
gene_biotype: protein_coding
description:
  Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.


ensembl_gene_id: SAMN02746089_02317
symbol: dapA
gene_biotype: protein_coding
description:
  4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).


ensembl_gene_id: SAMN02746089_02318
symbol: asd
gene_biotype: protein_coding
description:
  Aspartate semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.


ensembl_gene_id: SAMN02746089_02319
symbol: SHF65217.1
gene_biotype: protein_coding
description:
  Carbohydrate ABC transporter ATP-binding protein, CUT1 family (TC 3.A.1.1.-); Belongs to the ABC transporter superfamily.


ensembl_gene_id: SAMN02746089_02322
symbol: ftsE
gene_biotype: protein_coding
description:
  Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.


ensembl_gene_id: SAMN02746089_02323
symbol: SHF65388.1
gene_biotype: protein_coding
description:
  Cell division transport system permease protein; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.


ensembl_gene_id: SAMN02746089_02325
symbol: SHF65471.1
gene_biotype: protein_coding
description:
  C-terminal processing peptidase-3. Serine peptidase. MEROPS family S41A; Belongs to the peptidase S41A family.


ensembl_gene_id: SAMN02746089_02331
symbol: SHF65693.1
gene_biotype: protein_coding
description:
  Purine-nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.


ensembl_gene_id: SAMN02746089_02341
symbol: pfp
gene_biotype: protein_coding
description:
  6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP- PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions.


ensembl_gene_id: SAMN02746089_02358
symbol: SHF67479.1
gene_biotype: protein_coding
description:
  Oxaloacetate decarboxylase, beta subunit; Tunnel subunit of the primary sodium pump glutaconyl-CoA decarboxylase (GCD).


ensembl_gene_id: SAMN02746089_02362
symbol: thrB
gene_biotype: protein_coding
description:
  Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily.


ensembl_gene_id: SAMN02746089_02373
symbol: SHF68034.1
gene_biotype: protein_coding
description:
  ATP-binding protein involved in chromosome partitioning; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.


ensembl_gene_id: SAMN02746089_02375
symbol: pstB-2
gene_biotype: protein_coding
description:
  Phosphate ABC transporter ATP-binding protein, PhoT family (TC 3.A.1.7.1); Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.


ensembl_gene_id: SAMN02746089_02396
symbol: SHF69371.1
gene_biotype: protein_coding
description:
  Protein-tyrosine-phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.


ensembl_gene_id: SAMN02746089_02433
symbol: SHF71247.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: SAMN02746089_02435
symbol: uvrB
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate  [...]


ensembl_gene_id: SAMN02746089_02467
symbol: SHF73518.1
gene_biotype: protein_coding
description:
  Aryl-phospho-beta-D-glucosidase BglC, GH1 family; Belongs to the glycosyl hydrolase 5 (cellulase A) family.


ensembl_gene_id: SAMN02746089_02471
symbol: hflX
gene_biotype: protein_coding
description:
  GTP-binding protein HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.


ensembl_gene_id: SAMN02746089_02474
symbol: SHF73839.1
gene_biotype: protein_coding
description:
  Anaerobic sulfite reductase subunit C; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.


ensembl_gene_id: SAMN02746089_02479
symbol: SHF74483.1
gene_biotype: protein_coding
description:
  Phosphate:acyl-[acyl carrier protein] acyltransferase; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.


ensembl_gene_id: SAMN02746089_02480
symbol: fabH
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] synthase-3; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.


ensembl_gene_id: SAMN02746089_02483
symbol: SHF74630.1
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: SAMN02746089_02485
symbol: SHF74703.1
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.


ensembl_gene_id: SAMN02746089_02489
symbol: smc
gene_biotype: protein_coding
description:
  Condensin subunit Smc; Required for chromosome condensation and partitioning. Belongs to the SMC family.


ensembl_gene_id: SAMN02746089_02490
symbol: ftsY
gene_biotype: protein_coding
description:
  Fused signal recognition particle receptor; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC).


ensembl_gene_id: SAMN02746089_02491
symbol: SHF74935.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a regulatory protein.


ensembl_gene_id: SAMN02746089_02492
symbol: ffh
gene_biotype: protein_coding
description:
  Signal recognition particle subunit FFH/SRP54 (srp54); Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily.


ensembl_gene_id: SAMN02746089_02495
symbol: rimM
gene_biotype: protein_coding
description:
  16S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.


ensembl_gene_id: SAMN02746089_02496
symbol: trmD
gene_biotype: protein_coding
description:
  tRNA (guanine37-N1)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.


ensembl_gene_id: SAMN02746089_02497
symbol: rplS
gene_biotype: protein_coding
description:
  LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.


ensembl_gene_id: SAMN02746089_02498
symbol: SHF75195.1
gene_biotype: protein_coding
description:
  Ribosome biogenesis GTPase A; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.


ensembl_gene_id: SAMN02746089_02531
symbol: nnrD
gene_biotype: protein_coding
description:
  NAD(P)H-hydrate epimerase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration.  Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of bot [...]


ensembl_gene_id: SAMN02746089_02532
symbol: SHF77628.1
gene_biotype: protein_coding
description:
  Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.


ensembl_gene_id: SAMN02746089_02537
symbol: SHF77844.1
gene_biotype: protein_coding
description:
  N-acetylmannosaminyltransferase; Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid.


ensembl_gene_id: SAMN02746089_02556
symbol: serS
gene_biotype: protein_coding
description:
  seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).


ensembl_gene_id: SAMN02746089_02563
symbol: cobT
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB).


ensembl_gene_id: SAMN02746089_02598
symbol: SHF81367.1
gene_biotype: protein_coding
description:
  Cobalt-zinc-cadmium efflux system protein; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.


ensembl_gene_id: SAMN02746089_02599
symbol: SHF81713.1
gene_biotype: protein_coding
description:
  Fatty acid/phospholipid synthesis protein PlsX; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.


ensembl_gene_id: SAMN02746089_02606
symbol: cheB
gene_biotype: protein_coding
description:
  Two-component system, chemotaxis family, response regulator CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.


ensembl_gene_id: SAMN02746089_02614
symbol: secE
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.


ensembl_gene_id: SAMN02746089_02615
symbol: nusG
gene_biotype: protein_coding
description:
  Transcription antitermination protein nusG; Participates in transcription elongation, termination and antitermination.


ensembl_gene_id: SAMN02746089_02616
symbol: rplK
gene_biotype: protein_coding
description:
  LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.


ensembl_gene_id: SAMN02746089_02617
symbol: rplA
gene_biotype: protein_coding
description:
  LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.


ensembl_gene_id: SAMN02746089_02619
symbol: rplJ
gene_biotype: protein_coding
description:
  LSU ribosomal protein L10P; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.


ensembl_gene_id: SAMN02746089_02620
symbol: rplL
gene_biotype: protein_coding
description:
  LSU ribosomal protein L12P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.


ensembl_gene_id: SAMN02746089_02621
symbol: rpoB
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: SAMN02746089_02624
symbol: rpsL
gene_biotype: protein_coding
description:
  SSU ribosomal protein S12P; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.


ensembl_gene_id: SAMN02746089_02625
symbol: rpsG
gene_biotype: protein_coding
description:
  SSU ribosomal protein S7P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.


ensembl_gene_id: SAMN02746089_02626
symbol: fusA
gene_biotype: protein_coding
description:
  Elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.


ensembl_gene_id: SAMN02746089_02628
symbol: aroB
gene_biotype: protein_coding
description:
  3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).


ensembl_gene_id: SAMN02746089_02632
symbol: argD
gene_biotype: protein_coding
description:
  acetylornithine/N-succinyldiaminopimelate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.


ensembl_gene_id: SAMN02746089_02633
symbol: argB
gene_biotype: protein_coding
description:
  N-acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.


ensembl_gene_id: SAMN02746089_02634
symbol: argJ
gene_biotype: protein_coding
description:
  Glutamate N-acetyltransferase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family.


ensembl_gene_id: SAMN02746089_02635
symbol: argC
gene_biotype: protein_coding
description:
  N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.


ensembl_gene_id: SAMN02746089_02641
symbol: SHF83981.1
gene_biotype: protein_coding
description:
  tRNA (cytidine/uridine-2'-O-)-methyltransferase; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.


ensembl_gene_id: SAMN02746089_02645
symbol: SHF84129.1
gene_biotype: protein_coding
description:
  PTS system D-glucosamine-specific IIA component, Glc family (TC 4.A.1.1.6)/PTS system D-glucosamine-specific IIB component, Glc family (TC 4.A.1.1.6)/PTS system D-glucosamine-specific IIC component, Glc family (TC 4.A.1.1.6).


ensembl_gene_id: SAMN02746089_02670
symbol: SHF85588.1
gene_biotype: protein_coding
description:
  ATP-dependent helicase/nuclease subunit A; ATP-dependent DNA helicase; Belongs to the helicase family. UvrD subfamily.


ensembl_gene_id: SAMN02746089_02673
symbol: SHF85958.1
gene_biotype: protein_coding
description:
  4-nitrophenyl phosphatase; Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro; Belongs to the HAD-like hydrolase superfamily. NagD family.


ensembl_gene_id: SAMN02746089_02677
symbol: dinB
gene_biotype: protein_coding
description:
  DNA polymerase-4; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.


ensembl_gene_id: SAMN02746089_02684
symbol: SHF86591.1
gene_biotype: protein_coding
description:
  Pyruvate formate lyase activating enzyme; Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine; Belongs to the organic radical-activating enzymes family.


ensembl_gene_id: SAMN02746089_02689
symbol: SHF86797.1
gene_biotype: protein_coding
description:
  2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family.


ensembl_gene_id: SAMN02746089_02731
symbol: SHF89405.1
gene_biotype: protein_coding
description:
  Alkylhydroperoxidase AhpD family core domain-containing protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.


ensembl_gene_id: SAMN02746089_02768
symbol: SHF91722.1
gene_biotype: protein_coding
description:
  Putative phosphotransacetylase; Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate.


ensembl_gene_id: SAMN02746089_02774
symbol: SHF92075.1
gene_biotype: protein_coding
description:
  23S rRNA (uracil1939-C5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.


# pathwayInfo

id: CL:1008
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1008_Mixed,_incl._Alpha-amino_acid_metabolic_process,_and_Nucleobase-containing_small_molecule_metabolic_process

description:
  Mixed, incl. Alpha-amino acid metabolic process, and Nucleobase-containing small molecule metabolic process


id: CL:1009
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1009_Mixed,_incl._Ribonucleoside_monophosphate_biosynthetic_process,_and_Alpha-amino_acid_biosynthetic_process

description:
  Mixed, incl. Ribonucleoside monophosphate biosynthetic process, and Alpha-amino acid biosynthetic process


id: CL:101
description: Mixed, incl. Translation elongation factor EF1B/ribosomal protein S6, and Small ribosomal subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:101_Mixed,_incl._Translation_elongation_factor_EF1B/ribosomal_protein_S6,_and_Small_ribosomal_subunit


id: CL:1010
description: Ribonucleoside monophosphate biosynthetic process, and Pyrimidine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1010_Ribonucleoside_monophosphate_biosynthetic_process,_and_Pyrimidine_metabolism


id: CL:1011
description: Ribonucleoside monophosphate biosynthetic process, and Pyrimidine nucleoside metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1011_Ribonucleoside_monophosphate_biosynthetic_process,_and_Pyrimidine_nucleoside_metabolic_process


id: CL:1012
description: Ribonucleoside monophosphate biosynthetic process, and One-carbon metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1012_Ribonucleoside_monophosphate_biosynthetic_process,_and_One-carbon_metabolism


id: CL:1016
description: De novo IMP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1016_De_novo_IMP_biosynthetic_process


id: CL:1018
description: De novo IMP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1018_De_novo_IMP_biosynthetic_process


id: CL:1035
description: AMP metabolic process, and GMP biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1035_AMP_metabolic_process,_and_GMP_biosynthesis


id: CL:1051
description: De novo UMP biosynthetic process, and Permease family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1051_De_novo_UMP_biosynthetic_process,_and_Permease_family


id: CL:1055
description: De novo UMP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1055_De_novo_UMP_biosynthetic_process


id: CL:1080
description: Mixed, incl. Pyrimidine nucleoside metabolic process, and UTP metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1080_Mixed,_incl._Pyrimidine_nucleoside_metabolic_process,_and_UTP_metabolic_process


id: CL:1096
description: Mixed, incl. Riboflavin metabolic process, and NUDIX domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1096_Mixed,_incl._Riboflavin_metabolic_process,_and_NUDIX_domain


id: CL:1097
description: Mixed, incl. Riboflavin metabolic process, and Tetrahydrofolate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1097_Mixed,_incl._Riboflavin_metabolic_process,_and_Tetrahydrofolate_biosynthetic_process


id: CL:110
description: Large ribosomal subunit, and Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:110_Large_ribosomal_subunit,_and_Structural_constituent_of_ribosome


id: CL:1116
description: CTP metabolic process, and Intein
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1116_CTP_metabolic_process,_and_Intein


id: CL:1128
description: NUDIX domain, and Nicotinamide nucleotide metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1128_NUDIX_domain,_and_Nicotinamide_nucleotide_metabolic_process


id: CL:113
description: Large ribosomal subunit, and Nucleotide-binding alpha-beta plait domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:113_Large_ribosomal_subunit,_and_Nucleotide-binding_alpha-beta_plait_domain_superfamily


id: CL:1138
description: Arginine metabolic process, and Lysine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1138_Arginine_metabolic_process,_and_Lysine_metabolic_process


id: CL:1140
description: Arginine metabolic process, and Lysine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1140_Arginine_metabolic_process,_and_Lysine_biosynthesis


id: CL:1180
description: Tyrosine metabolism, and Asparagine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1180_Tyrosine_metabolism,_and_Asparagine_metabolic_process


id: CL:1192
description: Mixed, incl. Pyruvate metabolism, and 2-Oxocarboxylic acid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1192_Mixed,_incl._Pyruvate_metabolism,_and_2-Oxocarboxylic_acid_metabolism


id: CL:1193
description: Pyruvate metabolism, and 2-Oxocarboxylic acid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1193_Pyruvate_metabolism,_and_2-Oxocarboxylic_acid_metabolism


id: CL:1194
description: Pyruvate metabolism, and 2-Oxocarboxylic acid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1194_Pyruvate_metabolism,_and_2-Oxocarboxylic_acid_metabolism


id: CL:1196
description: Citrate cycle (TCA cycle), and Valine, leucine and isoleucine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1196_Citrate_cycle_(TCA_cycle),_and_Valine,_leucine_and_isoleucine_biosynthesis


id: CL:1197
description: Citrate cycle (TCA cycle), and Carbon-nitrogen hydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1197_Citrate_cycle_(TCA_cycle),_and_Carbon-nitrogen_hydrolase


id: CL:1198
description: Citrate cycle (TCA cycle), and Carbon-nitrogen hydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1198_Citrate_cycle_(TCA_cycle),_and_Carbon-nitrogen_hydrolase


id: CL:1203
description: Pyruvate:ferredoxin oxidoreductase core domain II, and Dicarboxylic acid catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1203_Pyruvate:ferredoxin_oxidoreductase_core_domain_II,_and_Dicarboxylic_acid_catabolic_process


id: CL:1228
description: Mixed, incl. Sodium ion transport, and Malate dehydrogenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1228_Mixed,_incl._Sodium_ion_transport,_and_Malate_dehydrogenase_activity


id: CL:1243
description: Valine, leucine and isoleucine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1243_Valine,_leucine_and_isoleucine_biosynthesis


id: CL:126
description: Large ribosomal subunit rRNA binding, and Translation regulation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:126_Large_ribosomal_subunit_rRNA_binding,_and_Translation_regulation


id: CL:1268
description: Mixed, incl. Iron-type alcohol dehydrogenase-like, and Taurine and hypotaurine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1268_Mixed,_incl._Iron-type_alcohol_dehydrogenase-like,_and_Taurine_and_hypotaurine_metabolism


id: CL:1270
description: Iron-type alcohol dehydrogenase-like, and Aldehyde dehydrogenase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1270_Iron-type_alcohol_dehydrogenase-like,_and_Aldehyde_dehydrogenase_domain


id: CL:1290
description: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain, and Microbody
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1290_D-isomer_specific_2-hydroxyacid_dehydrogenase,_catalytic_domain,_and_Microbody


id: CL:1302
description: Mixed, incl. Sulfur metabolism, and FAD/NAD(P)-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1302_Mixed,_incl._Sulfur_metabolism,_and_FAD/NAD(P)-binding_domain


id: CL:1303
description: Mixed, incl. Pyridine nucleotide-disulphide oxidoreductase, and Glutamate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1303_Mixed,_incl._Pyridine_nucleotide-disulphide_oxidoreductase,_and_Glutamate_biosynthetic_process


id: CL:1305
description: NADH:flavin oxidoreductase / NADH oxidase family, and Glutamate synthase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1305_NADH:flavin_oxidoreductase_/_NADH_oxidase_family,_and_Glutamate_synthase_domain


id: CL:1321
description: Glutamate biosynthetic process, and Oxygen metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1321_Glutamate_biosynthetic_process,_and_Oxygen_metabolic_process


id: CL:1335
description: Sulfur metabolism, and ThiF family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1335_Sulfur_metabolism,_and_ThiF_family


id: CL:1337
description: Mixed, incl. Sulfate assimilation, and ThiF family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1337_Mixed,_incl._Sulfate_assimilation,_and_ThiF_family


id: CL:1364
description: Mixed, incl. Sulfur amino acid metabolic process, and Methyltransferase type 11
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1364_Mixed,_incl._Sulfur_amino_acid_metabolic_process,_and_Methyltransferase_type_11


id: CL:1365
description: Sulfur amino acid metabolic process, and Methyltransferase type 11
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1365_Sulfur_amino_acid_metabolic_process,_and_Methyltransferase_type_11


id: CL:1368
description: Sulfur amino acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1368_Sulfur_amino_acid_metabolic_process


id: CL:1369
description: Threonine biosynthesis, and B12 binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1369_Threonine_biosynthesis,_and_B12_binding_domain


id: CL:1380
description: Transsulfuration, and ThiS family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1380_Transsulfuration,_and_ThiS_family


id: CL:1399
description: Mixed, incl. Cysteine biosynthetic process, and RNA 2-O ribose methyltransferase substrate binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1399_Mixed,_incl._Cysteine_biosynthetic_process,_and_RNA_2-O_ribose_methyltransferase_substrate_binding


id: CL:1422
description: Aromatic amino acid family biosynthetic process, and Histidine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1422_Aromatic_amino_acid_family_biosynthetic_process,_and_Histidine_biosynthesis


id: CL:1423
description: Aromatic amino acid family biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1423_Aromatic_amino_acid_family_biosynthetic_process


id: CL:1425
description: Chorismate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1425_Chorismate_biosynthetic_process


id: CL:144
description: L28p-like, and Zinc-binding ribosomal protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:144_L28p-like,_and_Zinc-binding_ribosomal_protein


id: CL:1483
description: Carbohydrate metabolic process, and Phosphotransferase system (PTS)
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1483_Carbohydrate_metabolic_process,_and_Phosphotransferase_system_(PTS)


id: CL:1484
description: Mixed, incl. Carbon metabolism, and Phosphotransferase system (PTS)
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1484_Mixed,_incl._Carbon_metabolism,_and_Phosphotransferase_system_(PTS)


id: CL:1485
description: Mixed, incl. Carbon metabolism, and Phosphotransferase system (PTS)
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1485_Mixed,_incl._Carbon_metabolism,_and_Phosphotransferase_system_(PTS)


id: CL:1486
description: Mixed, incl. Carbon metabolism, and Phosphotransferase system (PTS)
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1486_Mixed,_incl._Carbon_metabolism,_and_Phosphotransferase_system_(PTS)


id: CL:1487
description: Mixed, incl. Glycolysis / Gluconeogenesis, and Phosphotransferase system (PTS)
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1487_Mixed,_incl._Glycolysis_/_Gluconeogenesis,_and_Phosphotransferase_system_(PTS)


id: CL:1488
description: Mixed, incl. Pentose phosphate pathway, and Phosphotransferase system (PTS)
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1488_Mixed,_incl._Pentose_phosphate_pathway,_and_Phosphotransferase_system_(PTS)


id: CL:1489
description: Mixed, incl. Glycolytic process, and Phosphotransferase system (PTS)
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1489_Mixed,_incl._Glycolytic_process,_and_Phosphotransferase_system_(PTS)


id: CL:1490
description: Mixed, incl. Glycolytic process, and Phosphotransferase system (PTS)
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1490_Mixed,_incl._Glycolytic_process,_and_Phosphotransferase_system_(PTS)


id: CL:1491
description: Mixed, incl. Glycolytic process, and Amino sugar metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1491_Mixed,_incl._Glycolytic_process,_and_Amino_sugar_metabolic_process


id: CL:1492
description: Glycolytic process, and KDPG/KHG aldolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1492_Glycolytic_process,_and_KDPG/KHG_aldolase


id: CL:1495
description: Glycolysis, and Fructose-1,6-bisphosphate aldolase, class 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1495_Glycolysis,_and_Fructose-1,6-bisphosphate_aldolase,_class_2


id: CL:1520
description: KDPG/KHG aldolase, and L-serine biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1520_KDPG/KHG_aldolase,_and_L-serine_biosynthetic_process


id: CL:1529
description: N-acetylglucosamine metabolic process, and GlmS/FrlB, SIS domain 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1529_N-acetylglucosamine_metabolic_process,_and_GlmS/FrlB,_SIS_domain_2


id: CL:1531
description: GlmS/FrlB, SIS domain 2, and N-acetylglucosamine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1531_GlmS/FrlB,_SIS_domain_2,_and_N-acetylglucosamine_metabolic_process


id: CL:1548
description: Phosphotransferase system (PTS)
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1548_Phosphotransferase_system_(PTS)


id: CL:1567
description: Amine-lyase activity, and LacI-type HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1567_Amine-lyase_activity,_and_LacI-type_HTH_domain


id: CL:1578
description: Mixed, incl. Pentose catabolic process, and Glycerol dehydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1578_Mixed,_incl._Pentose_catabolic_process,_and_Glycerol_dehydrogenase


id: CL:1580
description: Mixed, incl. Glycerol dehydrogenase, and Pentose shunt
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1580_Mixed,_incl._Glycerol_dehydrogenase,_and_Pentose_shunt


id: CL:1597
description: ROK family, and Family 4 glycosyl hydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1597_ROK_family,_and_Family_4_glycosyl_hydrolase


id: CL:1598
description: Family 4 glycosyl hydrolase, and ROK family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1598_Family_4_glycosyl_hydrolase,_and_ROK_family


id: CL:1599
description: Family 4 glycosyl hydrolase, and D-xylose metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1599_Family_4_glycosyl_hydrolase,_and_D-xylose_metabolic_process


id: CL:1610
description: Mixed, incl. Hexokinase activity, and mannose-6-phosphate isomerase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1610_Mixed,_incl._Hexokinase_activity,_and_mannose-6-phosphate_isomerase_activity


id: CL:1621
description: ROK family, and Plasma membrane region
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1621_ROK_family,_and_Plasma_membrane_region


id: CL:1632
description: Mixed, incl. Xylulokinase, and Pentose shunt
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1632_Mixed,_incl._Xylulokinase,_and_Pentose_shunt


id: CL:1647
description: Mixed, incl. L-threonine catabolic process to glycine, and Fucose metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1647_Mixed,_incl._L-threonine_catabolic_process_to_glycine,_and_Fucose_metabolic_process


id: CL:1649
description: Fucose metabolic process, and L-threonine 3-dehydrogenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1649_Fucose_metabolic_process,_and_L-threonine_3-dehydrogenase_activity


id: CL:165
description: rRNA-binding, and Protein transport by the Sec complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:165_rRNA-binding,_and_Protein_transport_by_the_Sec_complex


id: CL:167
description: Ribosomal subunit, and Initiation factor
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:167_Ribosomal_subunit,_and_Initiation_factor


id: CL:1671
description: NADPH regeneration, and Protein of unknown function DUF6062
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1671_NADPH_regeneration,_and_Protein_of_unknown_function_DUF6062


id: CL:1685
description: Mixed, incl. Amidohydrolase, and Alkaline shock protein Asp23
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1685_Mixed,_incl._Amidohydrolase,_and_Alkaline_shock_protein_Asp23


id: CL:1696
description: Nicotinate and nicotinamide metabolism, and PP-loop family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1696_Nicotinate_and_nicotinamide_metabolism,_and_PP-loop_family


id: CL:1697
description: Mixed, incl. Nicotinamide nucleotide biosynthetic process, and PP-loop family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1697_Mixed,_incl._Nicotinamide_nucleotide_biosynthetic_process,_and_PP-loop_family


id: CL:1698
description: Nicotinamide nucleotide biosynthetic process, and PP-loop family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1698_Nicotinamide_nucleotide_biosynthetic_process,_and_PP-loop_family


id: CL:1701
description: Nicotinamide nucleotide biosynthetic process, and Negative regulation of translation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1701_Nicotinamide_nucleotide_biosynthetic_process,_and_Negative_regulation_of_translation


id: CL:1721
description: Mixed, incl. Putative zinc-finger, and Quinolinate phosphoribosyl transferase, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1721_Mixed,_incl._Putative_zinc-finger,_and_Quinolinate_phosphoribosyl_transferase,_N-terminal


id: CL:1735
description: Regulator of K+ conductance, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1735_Regulator_of_K+_conductance,_N-terminal


id: CL:1745
description: Mixed, incl. Electron transport chain, and Protein maturation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1745_Mixed,_incl._Electron_transport_chain,_and_Protein_maturation


id: CL:1746
description: Mixed, incl. Electron transport chain, and Protein maturation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1746_Mixed,_incl._Electron_transport_chain,_and_Protein_maturation


id: CL:1747
description: Mixed, incl. Electron transport chain, and Terpenoid backbone biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1747_Mixed,_incl._Electron_transport_chain,_and_Terpenoid_backbone_biosynthesis


id: CL:1748
description: Mixed, incl. Iron hydrogenase, and Biotin and Thiamin Synthesis associated domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1748_Mixed,_incl._Iron_hydrogenase,_and_Biotin_and_Thiamin_Synthesis_associated_domain


id: CL:1749
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1749_Mixed,_incl._Iron_hydrogenase,_and_HPr(Ser)_kinase/phosphorylase-like,_N-terminal_domain_superfamily

description:
  Mixed, incl. Iron hydrogenase, and HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily


id: CL:1751
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1751_Mixed,_incl._Iron_hydrogenase,_and_HPr(Ser)_kinase/phosphorylase-like,_N-terminal_domain_superfamily

description:
  Mixed, incl. Iron hydrogenase, and HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily


id: CL:1753
description: Iron hydrogenase, and Thioredoxin-like [2Fe-2S] ferredoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1753_Iron_hydrogenase,_and_Thioredoxin-like_[2Fe-2S]_ferredoxin


id: CL:1780
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1780_Mixed,_incl._Biotin_and_Thiamin_Synthesis_associated_domain,_and_Tricarboxylic_acid_metabolic_process

description:
  Mixed, incl. Biotin and Thiamin Synthesis associated domain, and Tricarboxylic acid metabolic process


id: CL:1793
description: Mixed, incl. Electron transport, and Polyprenyl synthetase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1793_Mixed,_incl._Electron_transport,_and_Polyprenyl_synthetase


id: CL:1794
description: Mixed, incl. Polyprenyl synthetase, and Prenyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1794_Mixed,_incl._Polyprenyl_synthetase,_and_Prenyltransferase_activity


id: CL:1797
description: Mixed, incl. NAD metabolic process, and Polyprenyl synthetase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1797_Mixed,_incl._NAD_metabolic_process,_and_Polyprenyl_synthetase


id: CL:1828
description: Mixed, incl. Oxidoreductase activity, acting on NAD(P)H, and Protein maturation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1828_Mixed,_incl._Oxidoreductase_activity,_acting_on_NAD(P)H,_and_Protein_maturation


id: CL:1830
description: Mixed, incl. Oxidoreductase activity, acting on NAD(P)H, and ATPase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1830_Mixed,_incl._Oxidoreductase_activity,_acting_on_NAD(P)H,_and_ATPase_complex


id: CL:1831
description: Oxidoreductase activity, acting on NAD(P)H
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1831_Oxidoreductase_activity,_acting_on_NAD(P)H


id: CL:1842
description: ATPase complex, and Protein maturation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1842_ATPase_complex,_and_Protein_maturation


id: CL:1856
description: Mixed, incl. N-methyltransferase activity, and Chromate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1856_Mixed,_incl._N-methyltransferase_activity,_and_Chromate_transport


id: CL:1858
description: Chromate transport, and Peptidyl-glutamine methylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1858_Chromate_transport,_and_Peptidyl-glutamine_methylation


id: CL:1876
description: CoA-ligase activity, and ACT domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1876_CoA-ligase_activity,_and_ACT_domain


id: CL:1888
description: Mixed, incl. Carbohydrate biosynthetic process, and O-Antigen nucleotide sugar biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1888_Mixed,_incl._Carbohydrate_biosynthetic_process,_and_O-Antigen_nucleotide_sugar_biosynthesis


id: CL:1889
description: Mixed, incl. Carbohydrate biosynthetic process, and O-Antigen nucleotide sugar biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1889_Mixed,_incl._Carbohydrate_biosynthetic_process,_and_O-Antigen_nucleotide_sugar_biosynthesis


id: CL:1891
description: Mixed, incl. Carbohydrate biosynthetic process, and O-Antigen nucleotide sugar biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1891_Mixed,_incl._Carbohydrate_biosynthetic_process,_and_O-Antigen_nucleotide_sugar_biosynthesis


id: CL:1892
description: Mixed, incl. Carbohydrate biosynthetic process, and O-Antigen nucleotide sugar biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1892_Mixed,_incl._Carbohydrate_biosynthetic_process,_and_O-Antigen_nucleotide_sugar_biosynthesis


id: CL:1893
description: Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and Polysaccharide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1893_Mixed,_incl._O-Antigen_nucleotide_sugar_biosynthesis,_and_Polysaccharide_biosynthetic_process


id: CL:1894
description: O-Antigen nucleotide sugar biosynthesis, and Polysaccharide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1894_O-Antigen_nucleotide_sugar_biosynthesis,_and_Polysaccharide_biosynthetic_process


id: CL:1895
description: Mixed, incl. Polysaccharide biosynthetic process, and Nucleotidyl transferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1895_Mixed,_incl._Polysaccharide_biosynthetic_process,_and_Nucleotidyl_transferase_domain


id: CL:1897
description: Polysaccharide biosynthetic process, and Nucleotidyl transferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1897_Polysaccharide_biosynthetic_process,_and_Nucleotidyl_transferase_domain


id: CL:1899
description: Polysaccharide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1899_Polysaccharide_biosynthetic_process


id: CL:1902
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1902_UDP-glucose/GDP-mannose_dehydrogenase_family,_NAD_binding_domain,_and_NAD-dependent_epimerase/dehydratase

description:
  UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain, and NAD-dependent epimerase/dehydratase


id: CL:1932
description: Mixed, incl. Polyketide sugar unit biosynthesis, and Oligosaccharide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1932_Mixed,_incl._Polyketide_sugar_unit_biosynthesis,_and_Oligosaccharide_biosynthetic_process


id: CL:1936
description: MobA-like NTP transferase domain, and SAF domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1936_MobA-like_NTP_transferase_domain,_and_SAF_domain


id: CL:1956
description: Mixed, incl. UDP-glucose 4-epimerase activity, and Uridylyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1956_Mixed,_incl._UDP-glucose_4-epimerase_activity,_and_Uridylyltransferase_activity


id: CL:1971
description: Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and Glycosyltransferase like family 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1971_Mixed,_incl._O-Antigen_nucleotide_sugar_biosynthesis,_and_Glycosyltransferase_like_family_2


id: CL:1975
description: Mixed, incl. Glycosyltransferase like family 2, and DegT/DnrJ/EryC1/StrS aminotransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1975_Mixed,_incl._Glycosyltransferase_like_family_2,_and_DegT/DnrJ/EryC1/StrS_aminotransferase


id: CL:199
description: Mixed, incl. PRC-barrel domain, and K homology domain superfamily, prokaryotic type
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:199_Mixed,_incl._PRC-barrel_domain,_and_K_homology_domain_superfamily,_prokaryotic_type


id: CL:1996
description: Mixed, incl. Glucan biosynthetic process, and Cof family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1996_Mixed,_incl._Glucan_biosynthetic_process,_and_Cof_family


id: CL:1997
description: Mixed, incl. Cof family, and Glycoside hydrolase families 57/38, central domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1997_Mixed,_incl._Cof_family,_and_Glycoside_hydrolase_families_57/38,_central_domain_superfamily


id: CL:1999
description: Mixed, incl. Cof family, and Alpha-D-phosphohexomutase, alpha/beta/alpha domain I
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:1999_Mixed,_incl._Cof_family,_and_Alpha-D-phosphohexomutase,_alpha/beta/alpha_domain_I


id: CL:2019
description: Mixed, incl. O-Antigen ligase, and MobA-like NTP transferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2019_Mixed,_incl._O-Antigen_ligase,_and_MobA-like_NTP_transferase


id: CL:2035
description: Mixed, incl. Na+/Pi-cotransporter, and Glycosyl transferase, family 28, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2035_Mixed,_incl._Na+/Pi-cotransporter,_and_Glycosyl_transferase,_family_28,_C-terminal


id: CL:2056
description: Mixed, incl. Protein tyrosine phosphatase activity, and Telomere recombination
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2056_Mixed,_incl._Protein_tyrosine_phosphatase_activity,_and_Telomere_recombination


id: CL:2080
description: Mixed, incl. Macromolecule metabolic process, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2080_Mixed,_incl._Macromolecule_metabolic_process,_and_Signal


id: CL:2081
description: Mixed, incl. Response to stimulus, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2081_Mixed,_incl._Response_to_stimulus,_and_Signal


id: CL:2082
description: Mixed, incl. Response to stimulus, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2082_Mixed,_incl._Response_to_stimulus,_and_Signal


id: CL:2083
description: Mixed, incl. Response to stimulus, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2083_Mixed,_incl._Response_to_stimulus,_and_Signal


id: CL:2084
description: Mostly uncharacterized, incl. Response to biotic stimulus, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2084_Mostly_uncharacterized,_incl._Response_to_biotic_stimulus,_and_Signal


id: CL:2085
description: Mostly uncharacterized, incl. Response to biotic stimulus, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2085_Mostly_uncharacterized,_incl._Response_to_biotic_stimulus,_and_Signal


id: CL:2086
description: Mostly uncharacterized, incl. Response to virus, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2086_Mostly_uncharacterized,_incl._Response_to_virus,_and_Signal


id: CL:2088
description: Mixed, incl. Response to virus, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2088_Mixed,_incl._Response_to_virus,_and_Signal


id: CL:2089
description: Mixed, incl. Response to virus, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2089_Mixed,_incl._Response_to_virus,_and_Signal


id: CL:2090
description: Mixed, incl. Response to virus, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2090_Mixed,_incl._Response_to_virus,_and_Signal


id: CL:2091
description: Mixed, incl. Response to virus, and S-layer homology domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2091_Mixed,_incl._Response_to_virus,_and_S-layer_homology_domain


id: CL:2092
description: Mixed, incl. Response to virus, and Major facilitator superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2092_Mixed,_incl._Response_to_virus,_and_Major_facilitator_superfamily


id: CL:2095
description: Mixed, incl. Response to virus, and Major Facilitator Superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2095_Mixed,_incl._Response_to_virus,_and_Major_Facilitator_Superfamily


id: CL:2097
description: Mixed, incl. RAMP superfamily, and Major Facilitator Superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2097_Mixed,_incl._RAMP_superfamily,_and_Major_Facilitator_Superfamily


id: CL:2099
description: Mixed, incl. RAMP superfamily, and Glucan 1,4-alpha-glucosidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2099_Mixed,_incl._RAMP_superfamily,_and_Glucan_1,4-alpha-glucosidase_activity


id: CL:2103
description: RAMP superfamily, and Response to virus
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2103_RAMP_superfamily,_and_Response_to_virus


id: CL:2116
description: Mixed, incl. Glucan 1,4-alpha-glucosidase activity, and DNA topoisomerase, type IA, zn finger
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2116_Mixed,_incl._Glucan_1,4-alpha-glucosidase_activity,_and_DNA_topoisomerase,_type_IA,_zn_finger


id: CL:2139
description: RAMP superfamily, and Reverse transcriptase/Diguanylate cyclase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2139_RAMP_superfamily,_and_Reverse_transcriptase/Diguanylate_cyclase_domain


id: CL:2156
description: Mixed, incl. Glycosyl transferase family 2, and Domain of unknown function DUF6385
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2156_Mixed,_incl._Glycosyl_transferase_family_2,_and_Domain_of_unknown_function_DUF6385


id: CL:2158
description: Uncharacterised protein family UPF0236, and Transposase (putative), YhgA-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2158_Uncharacterised_protein_family_UPF0236,_and_Transposase_(putative),_YhgA-like


id: CL:2173
description: Glycosyl transferase family 2, and Domain of unknown function DUF6385
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2173_Glycosyl_transferase_family_2,_and_Domain_of_unknown_function_DUF6385


id: CL:2185
description: Mixed, incl. S-layer homology domain, and NAD(P)-binding Rossmann-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2185_Mixed,_incl._S-layer_homology_domain,_and_NAD(P)-binding_Rossmann-like_domain


id: CL:2187
description: Mostly uncharacterized, incl. S-layer homology domain, and O-Antigen ligase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2187_Mostly_uncharacterized,_incl._S-layer_homology_domain,_and_O-Antigen_ligase


id: CL:2188
description: Mixed, incl. S-layer homology domain, and O-Antigen ligase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2188_Mixed,_incl._S-layer_homology_domain,_and_O-Antigen_ligase


id: CL:2190
description: Mixed, incl. S-layer homology domain, and O-Antigen ligase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2190_Mixed,_incl._S-layer_homology_domain,_and_O-Antigen_ligase


id: CL:2192
description: Nucleotide catabolic process, and O-Antigen ligase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2192_Nucleotide_catabolic_process,_and_O-Antigen_ligase


id: CL:2204
description: Mixed, incl. Ligase activity, forming nitrogen-metal bonds, and O-acyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2204_Mixed,_incl._Ligase_activity,_forming_nitrogen-metal_bonds,_and_O-acyltransferase_activity


id: CL:2226
description: Mixed, incl. Beta-lactamase class A, catalytic domain, and Single-stranded DNA-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2226_Mixed,_incl._Beta-lactamase_class_A,_catalytic_domain,_and_Single-stranded_DNA-binding_protein


id: CL:2254
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2254_Mixed,_incl._Periplasmic_sensor-like_domain_superfamily,_and_Regulation_of_single-species_biofilm_formation

description:
  Mixed, incl. Periplasmic sensor-like domain superfamily, and Regulation of single-species biofilm formation


id: CL:2271
description: Mixed, incl. Exonuclease, and FtsK domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2271_Mixed,_incl._Exonuclease,_and_FtsK_domain


id: CL:2274
description: Mixed, incl. FtsK domain, and AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2274_Mixed,_incl._FtsK_domain,_and_AAA_domain


id: CL:229
description: Mixed, incl. RimP C-terminal SH3 domain, and tRNA pseudouridine synthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:229_Mixed,_incl._RimP_C-terminal_SH3_domain,_and_tRNA_pseudouridine_synthesis


id: CL:2294
description: Mixed, incl. Transposase, mutator type, and Phosphodiester glycosidase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2294_Mixed,_incl._Transposase,_mutator_type,_and_Phosphodiester_glycosidase


id: CL:2311
description: Mixed, incl. Transglutaminase-like, and Vicinal oxygen chelate (VOC) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2311_Mixed,_incl._Transglutaminase-like,_and_Vicinal_oxygen_chelate_(VOC)_domain


id: CL:2326
description: Mixed, incl. Cache domain, and CdaR, GGDEF-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2326_Mixed,_incl._Cache_domain,_and_CdaR,_GGDEF-like_domain


id: CL:2328
description: Mixed, incl. Histidine kinase, and Periplasmic binding protein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2328_Mixed,_incl._Histidine_kinase,_and_Periplasmic_binding_protein_domain


id: CL:2342
description: Mixed, incl. Glycosyltransferase Family 4, and Thioredoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2342_Mixed,_incl._Glycosyltransferase_Family_4,_and_Thioredoxin


id: CL:2360
description: Mixed, incl. Putative adhesin, and tRNA thio-modification
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2360_Mixed,_incl._Putative_adhesin,_and_tRNA_thio-modification


id: CL:2371
description: Mixed, incl. Glutathione metabolism, and tRNA (adenine) methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2371_Mixed,_incl._Glutathione_metabolism,_and_tRNA_(adenine)_methyltransferase_activity


id: CL:2373
description: Mixed, incl. Sister chromatid cohesion, and Spore germination
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2373_Mixed,_incl._Sister_chromatid_cohesion,_and_Spore_germination


id: CL:2393
description: Mixed, incl. Intein, and 4Fe-4S double cluster binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2393_Mixed,_incl._Intein,_and_4Fe-4S_double_cluster_binding_domain


id: CL:2409
description: Mixed, incl. Putative restriction endonuclease, and RNA polymerase sigma-70 like
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2409_Mixed,_incl._Putative_restriction_endonuclease,_and_RNA_polymerase_sigma-70_like


id: CL:2418
description: Mixed, incl. Histidine metabolism, and Asexual sporulation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2418_Mixed,_incl._Histidine_metabolism,_and_Asexual_sporulation


id: CL:2419
description: Mixed, incl. DEDD transposase family, and Asexual sporulation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2419_Mixed,_incl._DEDD_transposase_family,_and_Asexual_sporulation


id: CL:2421
description: Mixed, incl. Putative zinc-finger, and ABC-2 family transporter protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2421_Mixed,_incl._Putative_zinc-finger,_and_ABC-2_family_transporter_protein


id: CL:2431
description: DEDD transposase family, and Asexual sporulation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2431_DEDD_transposase_family,_and_Asexual_sporulation


id: CL:244
description: RNA polymerase, and Regulation of DNA-templated transcription, elongation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:244_RNA_polymerase,_and_Regulation_of_DNA-templated_transcription,_elongation


id: CL:2443
description: Mixed, incl. Ribonuclease HepT-like, and ATPase, dynein-related, AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2443_Mixed,_incl._Ribonuclease_HepT-like,_and_ATPase,_dynein-related,_AAA_domain


id: CL:2458
description: Mixed, incl. MacB, ATP-binding domain, and FtsX-like permease family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2458_Mixed,_incl._MacB,_ATP-binding_domain,_and_FtsX-like_permease_family


id: CL:2459
description: Mixed, incl. ABC transporter, lipoprotein release, LolD-like, and FtsX-like permease family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2459_Mixed,_incl._ABC_transporter,_lipoprotein_release,_LolD-like,_and_FtsX-like_permease_family


id: CL:2460
description: Mixed, incl. ABC transporter, lipoprotein release, LolD-like, and FtsX-like permease family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2460_Mixed,_incl._ABC_transporter,_lipoprotein_release,_LolD-like,_and_FtsX-like_permease_family


id: CL:2462
description: ABC transporter, lipoprotein release, LolD-like, and FtsX-like permease family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2462_ABC_transporter,_lipoprotein_release,_LolD-like,_and_FtsX-like_permease_family


id: CL:2479
description: Mixed, incl. Lipase activity, and Adaptive Immune System
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2479_Mixed,_incl._Lipase_activity,_and_Adaptive_Immune_System


id: CL:2488
description: Mixed, incl. RND efflux pump, membrane fusion protein, and MacB-like periplasmic core domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2488_Mixed,_incl._RND_efflux_pump,_membrane_fusion_protein,_and_MacB-like_periplasmic_core_domain


id: CL:2508
description: Mixed, incl. Deoxyhypusine synthase activity, and Lipopolysaccharide biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2508_Mixed,_incl._Deoxyhypusine_synthase_activity,_and_Lipopolysaccharide_biosynthesis


id: CL:2510
description: Deoxyhypusine synthase activity, and Lipopolysaccharide biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2510_Deoxyhypusine_synthase_activity,_and_Lipopolysaccharide_biosynthesis


id: CL:2537
description: Mixed, incl. Response to virus, and CRISPR-associated protein Cas7
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2537_Mixed,_incl._Response_to_virus,_and_CRISPR-associated_protein_Cas7


id: CL:2539
description: Response to virus, and CRISPR-associated protein Cas7
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2539_Response_to_virus,_and_CRISPR-associated_protein_Cas7


id: CL:2541
description: Mixed, incl. Antiviral defense, and CRISPR-associated protein Cas7
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2541_Mixed,_incl._Antiviral_defense,_and_CRISPR-associated_protein_Cas7


id: CL:2564
description: Mixed, incl. Antiviral defense, and CRISPR-associated protein, Cas5
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2564_Mixed,_incl._Antiviral_defense,_and_CRISPR-associated_protein,_Cas5


id: CL:2585
description: Mixed, incl. Coat F domain, and Cellular metal ion homeostasis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2585_Mixed,_incl._Coat_F_domain,_and_Cellular_metal_ion_homeostasis


id: CL:2594
description: Mixed, incl. Cell differentiation, and Phosphate ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2594_Mixed,_incl._Cell_differentiation,_and_Phosphate_ion_transport


id: CL:2595
description: Mixed, incl. Cell differentiation, and Phosphate ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2595_Mixed,_incl._Cell_differentiation,_and_Phosphate_ion_transport


id: CL:2596
description: Mixed, incl. Cell differentiation, and Chromosome organization
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2596_Mixed,_incl._Cell_differentiation,_and_Chromosome_organization


id: CL:2597
description: Cell differentiation, and SASP, alpha/beta-type superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2597_Cell_differentiation,_and_SASP,_alpha/beta-type_superfamily


id: CL:2598
description: Cell differentiation, and SASP, alpha/beta-type superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2598_Cell_differentiation,_and_SASP,_alpha/beta-type_superfamily


id: CL:2600
description: Cell differentiation, and SASP, alpha/beta-type superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2600_Cell_differentiation,_and_SASP,_alpha/beta-type_superfamily


id: CL:2602
description: Cell differentiation, and AsnC-type HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2602_Cell_differentiation,_and_AsnC-type_HTH_domain


id: CL:2608
description: Mixed, incl. RNA polymerase sigma-70, and Sporulation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2608_Mixed,_incl._RNA_polymerase_sigma-70,_and_Sporulation


id: CL:2611
description: Mixed, incl. Aspartyl protease, and SpoVT / AbrB like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2611_Mixed,_incl._Aspartyl_protease,_and_SpoVT_/_AbrB_like_domain


id: CL:2626
description: Mixed, incl. Zymogen, and Sporulation stage II, protein P
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2626_Mixed,_incl._Zymogen,_and_Sporulation_stage_II,_protein_P


id: CL:2635
description: Mixed, incl. SpoVA, and Protein serine kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2635_Mixed,_incl._SpoVA,_and_Protein_serine_kinase_activity


id: CL:264
description: Mixed, incl. SpoOB, alpha-helical domain, and OBG-type guanine nucleotide-binding (G) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:264_Mixed,_incl._SpoOB,_alpha-helical_domain,_and_OBG-type_guanine_nucleotide-binding_(G)_domain


id: CL:2650
description: Stage III sporulation protein AC/AD family, and Sporulation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2650_Stage_III_sporulation_protein_AC/AD_family,_and_Sporulation


id: CL:2668
description: Spore germination GerAB, and Spore germination GerAC-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2668_Spore_germination_GerAB,_and_Spore_germination_GerAC-like


id: CL:2685
description: Spore germination, and AsnC-type HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2685_Spore_germination,_and_AsnC-type_HTH_domain


id: CL:2732
description: Endospore-forming forespore, and Septum formation initiator
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2732_Endospore-forming_forespore,_and_Septum_formation_initiator


id: CL:2744
description: Mixed, incl. Isoprenoid metabolic process, and Chromosome segregation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2744_Mixed,_incl._Isoprenoid_metabolic_process,_and_Chromosome_segregation


id: CL:2745
description: Mixed, incl. Chromosome segregation, and Spermidine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2745_Mixed,_incl._Chromosome_segregation,_and_Spermidine_biosynthesis


id: CL:2746
description: Mixed, incl. Spermidine biosynthesis, and Dimethylallyl diphosphate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2746_Mixed,_incl._Spermidine_biosynthesis,_and_Dimethylallyl_diphosphate_metabolic_process


id: CL:2748
description: Dimethylallyl diphosphate metabolic process, and RutC-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2748_Dimethylallyl_diphosphate_metabolic_process,_and_RutC-like_superfamily


id: CL:2767
description: Mixed, incl. Chromosome partition, and MnmG, N-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2767_Mixed,_incl._Chromosome_partition,_and_MnmG,_N-terminal_domain


id: CL:2769
description: Mixed, incl. MnmG, N-terminal domain, and Pseudouridine synthase, RsuA/RluB/E/F
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2769_Mixed,_incl._MnmG,_N-terminal_domain,_and_Pseudouridine_synthase,_RsuA/RluB/E/F


id: CL:2788
description: Mixed, incl. DNA catabolic process, and Isoprenoid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2788_Mixed,_incl._DNA_catabolic_process,_and_Isoprenoid_metabolic_process


id: CL:279
description: SRP54-type protein, helical bundle domain, and Translocation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:279_SRP54-type_protein,_helical_bundle_domain,_and_Translocation


id: CL:2790
description: DNA catabolic process, and NusB family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2790_DNA_catabolic_process,_and_NusB_family


id: CL:2800
description: Mixed, incl. Thiamine pyrophosphate, and Amino acid binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2800_Mixed,_incl._Thiamine_pyrophosphate,_and_Amino_acid_binding


id: CL:2809
description: Mixed, incl. Phosphate ion transport, and Protein of unknown function DUF3189
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2809_Mixed,_incl._Phosphate_ion_transport,_and_Protein_of_unknown_function_DUF3189


id: CL:2811
description: Mixed, incl. Phosphate ion transport, and Protein of unknown function DUF3189
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2811_Mixed,_incl._Phosphate_ion_transport,_and_Protein_of_unknown_function_DUF3189


id: CL:2812
description: Mixed, incl. Phosphate ion transport, and Protein of unknown function DUF3189
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2812_Mixed,_incl._Phosphate_ion_transport,_and_Protein_of_unknown_function_DUF3189


id: CL:2815
description: Phosphate transport, and PBP domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2815_Phosphate_transport,_and_PBP_domain


id: CL:2830
description: Mixed, incl. Protein of unknown function DUF3189, and Sporulation stage II, protein P
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2830_Mixed,_incl._Protein_of_unknown_function_DUF3189,_and_Sporulation_stage_II,_protein_P


id: CL:2843
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2843_Mixed,_incl._Alanine_racemase,_N-terminal,_and_Nucleotide-binding_alpha-beta_plait_domain_superfamily

description:
  Mixed, incl. Alanine racemase, N-terminal, and Nucleotide-binding alpha-beta plait domain superfamily


id: CL:2859
description: Mostly uncharacterized, incl. Peptidase M41, and Thiamine diphosphokinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2859_Mostly_uncharacterized,_incl._Peptidase_M41,_and_Thiamine_diphosphokinase_activity


id: CL:2860
description: Mixed, incl. Thiamine diphosphokinase activity, and Glycosyltransferase like family 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2860_Mixed,_incl._Thiamine_diphosphokinase_activity,_and_Glycosyltransferase_like_family_2


id: CL:2864
description: Mixed, incl. Thiamine diphosphokinase activity, and Glycosyltransferase like family 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2864_Mixed,_incl._Thiamine_diphosphokinase_activity,_and_Glycosyltransferase_like_family_2


id: CL:2879
description: Mixed, incl. Peptidase M41, and Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2879_Mixed,_incl._Peptidase_M41,_and_Quinate/shikimate_5-dehydrogenase/glutamyl-tRNA_reductase


id: CL:2894
description: Mixed, incl. LSM domain superfamily, and Cyclic nucleotide-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2894_Mixed,_incl._LSM_domain_superfamily,_and_Cyclic_nucleotide-binding_domain


id: CL:2909
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2909_Mixed,_incl._Benzoate_degradation,_and_Carbon-nitrogen_ligase_activity,_with_glutamine_as_amido-N-donor

description:
  Mixed, incl. Benzoate degradation, and Carbon-nitrogen ligase activity, with glutamine as amido-N-donor


id: CL:2910
description: Mixed, incl. Benzoate degradation, and Regulation of catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2910_Mixed,_incl._Benzoate_degradation,_and_Regulation_of_catabolic_process


id: CL:2913
description: Mixed, incl. CoA enzyme activase, and Thioesterase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2913_Mixed,_incl._CoA_enzyme_activase,_and_Thioesterase_domain


id: CL:2935
description: Mixed, incl. Cold shock domain, and NagB/RpiA transferase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2935_Mixed,_incl._Cold_shock_domain,_and_NagB/RpiA_transferase-like


id: CL:294
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:294_Aminoacyl-tRNA_synthetase,_class_I,_conserved_site,_and_Aminoacyl-tRNA_synthetase,_class_II_(G/_P/_S/T)

description:
  Aminoacyl-tRNA synthetase, class I, conserved site, and Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)


id: CL:2946
description: Mixed, incl. Response to toxic substance, and Electron transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2946_Mixed,_incl._Response_to_toxic_substance,_and_Electron_transport


id: CL:2948
description: Mixed, incl. Response to toxic substance, and Electron transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2948_Mixed,_incl._Response_to_toxic_substance,_and_Electron_transport


id: CL:2949
description: Mixed, incl. Rubredoxin-like domain, and Flavodoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2949_Mixed,_incl._Rubredoxin-like_domain,_and_Flavodoxin


id: CL:2952
description: Rubredoxin-like domain, and Flavodoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2952_Rubredoxin-like_domain,_and_Flavodoxin


id: CL:297
description: Aminoacyl-tRNA synthetase, class Ia, anticodon-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:297_Aminoacyl-tRNA_synthetase,_class_Ia,_anticodon-binding


id: CL:2970
description: Prismane-like superfamily, and Nitrotoluene degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2970_Prismane-like_superfamily,_and_Nitrotoluene_degradation


id: CL:2990
description: Mostly uncharacterized, incl. D-Alanine metabolism, and Arc-type ribbon-helix-helix
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2990_Mostly_uncharacterized,_incl._D-Alanine_metabolism,_and_Arc-type_ribbon-helix-helix


id: CL:2992
description: Mixed, incl. UDP-glycosyltransferase activity, and Transketolase, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:2992_Mixed,_incl._UDP-glycosyltransferase_activity,_and_Transketolase,_N-terminal


id: CL:3011
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3011_Mixed,_incl._Phosphonate_and_phosphinate_metabolism,_and_Glycoside_hydrolase/deacetylase,_beta/alpha-barrel

description:
  Mixed, incl. Phosphonate and phosphinate metabolism, and Glycoside hydrolase/deacetylase, beta/alpha-barrel


id: CL:3013
description: Mixed, incl. mRNA metabolic process, and Methyltransferase small domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3013_Mixed,_incl._mRNA_metabolic_process,_and_Methyltransferase_small_domain


id: CL:3015
description: Mixed, incl. mRNA metabolic process, and Organic anion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3015_Mixed,_incl._mRNA_metabolic_process,_and_Organic_anion_transport


id: CL:3039
description: Phosphonate and phosphinate metabolism, and Glycerophosphodiester phosphodiesterase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3039_Phosphonate_and_phosphinate_metabolism,_and_Glycerophosphodiester_phosphodiesterase_domain


id: CL:3051
description: Mixed, incl. Flagellar assembly, and Signal transduction
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3051_Mixed,_incl._Flagellar_assembly,_and_Signal_transduction


id: CL:3052
description: Mixed, incl. Flagellar assembly, and Signal transduction
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3052_Mixed,_incl._Flagellar_assembly,_and_Signal_transduction


id: CL:3054
description: Flagellar assembly, and Signal transduction
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3054_Flagellar_assembly,_and_Signal_transduction


id: CL:3055
description: Flagellar assembly, and Signal transduction
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3055_Flagellar_assembly,_and_Signal_transduction


id: CL:3056
description: Flagellar assembly, and Bacterial chemotaxis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3056_Flagellar_assembly,_and_Bacterial_chemotaxis


id: CL:3064
description: Bacterial-type flagellum-dependent cell motility
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3064_Bacterial-type_flagellum-dependent_cell_motility


id: CL:3067
description: Bacterial-type flagellum basal body
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3067_Bacterial-type_flagellum_basal_body


id: CL:3090
description: Bacterial flagellum protein export, and Bacterial-type flagellum assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3090_Bacterial_flagellum_protein_export,_and_Bacterial-type_flagellum_assembly


id: CL:3115
description: Bacterial-type flagellum hook, and CheC-like family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3115_Bacterial-type_flagellum_hook,_and_CheC-like_family


id: CL:3133
description: Mixed, incl. PilZ domain, and ATP binding protein MinD/FleN
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3133_Mixed,_incl._PilZ_domain,_and_ATP_binding_protein_MinD/FleN


id: CL:314
description: Mixed, incl. Isoprene biosynthesis, and UBA-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:314_Mixed,_incl._Isoprene_biosynthesis,_and_UBA-like_superfamily


id: CL:316
description: Mixed, incl. UBA-like superfamily, and Cytidylyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:316_Mixed,_incl._UBA-like_superfamily,_and_Cytidylyltransferase_activity


id: CL:3162
description: CheW-like domain, and CheC-like family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3162_CheW-like_domain,_and_CheC-like_family


id: CL:3175
description: Two-component regulatory system, and HD-GYP domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3175_Two-component_regulatory_system,_and_HD-GYP_domain


id: CL:3177
description: HD-GYP domain, and Diguanylate cyclase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3177_HD-GYP_domain,_and_Diguanylate_cyclase


id: CL:3179
description: Diguanylate cyclase, and HD-GYP domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3179_Diguanylate_cyclase,_and_HD-GYP_domain


id: CL:3205
description: Two-component regulatory system
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3205_Two-component_regulatory_system


id: CL:3207
description: Two-component regulatory system
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3207_Two-component_regulatory_system


id: CL:3231
description: Mixed, incl. Magnesium-chelatase subunit ChlI-like, and Horizontal gene transfer
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3231_Mixed,_incl._Magnesium-chelatase_subunit_ChlI-like,_and_Horizontal_gene_transfer


id: CL:3232
description: Mixed, incl. Magnesium-chelatase subunit ChlI-like, and tRNA endonuclease-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3232_Mixed,_incl._Magnesium-chelatase_subunit_ChlI-like,_and_tRNA_endonuclease-like_domain_superfamily


id: CL:3243
description: Mixed, incl. RecD-like DNA helicase, and DNA replication initiation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3243_Mixed,_incl._RecD-like_DNA_helicase,_and_DNA_replication_initiation


id: CL:3260
description: Mixed, incl. P-type potassium transmembrane transporter activity, and Dioxygenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3260_Mixed,_incl._P-type_potassium_transmembrane_transporter_activity,_and_Dioxygenase_activity


id: CL:3261
description: Mixed, incl. P-type potassium transmembrane transporter activity, and Dioxygenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3261_Mixed,_incl._P-type_potassium_transmembrane_transporter_activity,_and_Dioxygenase_activity


id: CL:3263
description: Mixed, incl. Dioxygenase activity, and Phosphorus-oxygen lyase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3263_Mixed,_incl._Dioxygenase_activity,_and_Phosphorus-oxygen_lyase_activity


id: CL:3273
description: P-type potassium transmembrane transporter activity, and Peptidyl-histidine modification
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3273_P-type_potassium_transmembrane_transporter_activity,_and_Peptidyl-histidine_modification


id: CL:3282
description: Mixed, incl. Acetyltransferase (GNAT) domain, and Glycoside hydrolase, family 3, active site
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3282_Mixed,_incl._Acetyltransferase_(GNAT)_domain,_and_Glycoside_hydrolase,_family_3,_active_site


id: CL:3291
description: Mixed, incl. Transition metal ion transport, and Cytochrome complex assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3291_Mixed,_incl._Transition_metal_ion_transport,_and_Cytochrome_complex_assembly


id: CL:3292
description: Mixed, incl. Copper ion transport, and Cytochrome complex assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3292_Mixed,_incl._Copper_ion_transport,_and_Cytochrome_complex_assembly


id: CL:3294
description: Mixed, incl. Cytochrome complex assembly, and Spermidine synthase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3294_Mixed,_incl._Cytochrome_complex_assembly,_and_Spermidine_synthase_activity


id: CL:3316
description: EamA domain, and Deubiquitinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3316_EamA_domain,_and_Deubiquitinase_activity


id: CL:3328
description: Mixed, incl. Secretion, and Pilus organization
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3328_Mixed,_incl._Secretion,_and_Pilus_organization


id: CL:3329
description: Mixed, incl. Bacterial secretion system, and Proline biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3329_Mixed,_incl._Bacterial_secretion_system,_and_Proline_biosynthesis


id: CL:3330
description: Mixed, incl. Prokaryotic N-terminal methylation motif, and Proline biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3330_Mixed,_incl._Prokaryotic_N-terminal_methylation_motif,_and_Proline_biosynthesis


id: CL:3333
description: Pilus organization, and Protein transport across the cell outer membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3333_Pilus_organization,_and_Protein_transport_across_the_cell_outer_membrane


id: CL:3336
description: Type II/IV secretion system protein, and GspF/PilC family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3336_Type_II/IV_secretion_system_protein,_and_GspF/PilC_family


id: CL:3356
description: Mixed, incl. Proline biosynthesis, and Creatinase, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3356_Mixed,_incl._Proline_biosynthesis,_and_Creatinase,_N-terminal


id: CL:3358
description: Prokaryotic N-terminal methylation motif, and Nucleus
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3358_Prokaryotic_N-terminal_methylation_motif,_and_Nucleus


id: CL:3375
description: Mixed, incl. Sulfur relay system, and rRNA processing
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3375_Mixed,_incl._Sulfur_relay_system,_and_rRNA_processing


id: CL:3376
description: Mixed, incl. Sulfur relay system, and Peptidase U32
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3376_Mixed,_incl._Sulfur_relay_system,_and_Peptidase_U32


id: CL:3377
description: Mixed, incl. Peptidase U32, and RNA 5-end processing
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3377_Mixed,_incl._Peptidase_U32,_and_RNA_5-end_processing


id: CL:338
description: PDZ domain, and Methyltransferase small domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:338_PDZ_domain,_and_Methyltransferase_small_domain


id: CL:3392
description: Sulfur relay system, and AI-2E family transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3392_Sulfur_relay_system,_and_AI-2E_family_transporter


id: CL:3405
description: Mixed, incl. Carboxylic acid transport, and Plasma membrane region
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3405_Mixed,_incl._Carboxylic_acid_transport,_and_Plasma_membrane_region


id: CL:3416
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3416_Mixed,_incl._Protein_transport_across_the_cell_outer_membrane,_and_Type_II_secretion_system_(T2SS),_protein_F

description:
  Mixed, incl. Protein transport across the cell outer membrane, and Type II secretion system (T2SS), protein F


id: CL:3417
description: Mixed, incl. Protein transport across the cell outer membrane, and Pilus organization
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3417_Mixed,_incl._Protein_transport_across_the_cell_outer_membrane,_and_Pilus_organization


id: CL:3419
description: Mixed, incl. Protein transport across the cell outer membrane, and Pilus organization
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3419_Mixed,_incl._Protein_transport_across_the_cell_outer_membrane,_and_Pilus_organization


id: CL:3421
description: Type II/IV secretion system protein, and GspF/PilC family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3421_Type_II/IV_secretion_system_protein,_and_GspF/PilC_family


id: CL:3447
description: AAA domain, and Type II secretion system (T2SS), protein F
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3447_AAA_domain,_and_Type_II_secretion_system_(T2SS),_protein_F


id: CL:3463
description: Mixed, incl. tRNA threonylcarbamoyladenosine modification, and Vitamin transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3463_Mixed,_incl._tRNA_threonylcarbamoyladenosine_modification,_and_Vitamin_transport


id: CL:3464
description: Mixed, incl. tRNA threonylcarbamoyladenosine modification, and Vitamin transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3464_Mixed,_incl._tRNA_threonylcarbamoyladenosine_modification,_and_Vitamin_transport


id: CL:3465
description: Mixed, incl. tRNA threonylcarbamoyladenosine modification, and YqgF/RNase H-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3465_Mixed,_incl._tRNA_threonylcarbamoyladenosine_modification,_and_YqgF/RNase_H-like_domain


id: CL:3467
description: tRNA threonylcarbamoyladenosine modification, and YqgF/RNase H-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3467_tRNA_threonylcarbamoyladenosine_modification,_and_YqgF/RNase_H-like_domain


id: CL:3486
description: Thiamine transport, and ECF transporter, substrate-specific component
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3486_Thiamine_transport,_and_ECF_transporter,_substrate-specific_component


id: CL:3495
description: Ammonia transport, and Nitrogen regulatory protein PII
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3495_Ammonia_transport,_and_Nitrogen_regulatory_protein_PII


id: CL:3504
description: Mixed, incl. Proton-transporting two-sector ATPase complex, and Nuclease, putative, TT1808
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3504_Mixed,_incl._Proton-transporting_two-sector_ATPase_complex,_and_Nuclease,_putative,_TT1808


id: CL:3506
description: Proton-transporting two-sector ATPase complex, and Acid phosphatase homologues
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3506_Proton-transporting_two-sector_ATPase_complex,_and_Acid_phosphatase_homologues


id: CL:3510
description: ATPase-coupled ion transmembrane transporter activity, and Lipid binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3510_ATPase-coupled_ion_transmembrane_transporter_activity,_and_Lipid_binding


id: CL:3512
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3512_Proton-transporting_V-type_ATPase_complex,_and_Proton_motive_force-driven_plasma_membrane_ATP_synthesis

description:
  Proton-transporting V-type ATPase complex, and Proton motive force-driven plasma membrane ATP synthesis


id: CL:354
description: Mixed, incl. RNA methylation, and phenylalanyl-tRNA aminoacylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:354_Mixed,_incl._RNA_methylation,_and_phenylalanyl-tRNA_aminoacylation


id: CL:3547
description: Mixed, incl. Nuclease, putative, TT1808, and Ribonuclease HepT-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3547_Mixed,_incl._Nuclease,_putative,_TT1808,_and_Ribonuclease_HepT-like


id: CL:3549
description: Mixed, incl. Ribonuclease HepT-like, and ATPase, AAA-3
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3549_Mixed,_incl._Ribonuclease_HepT-like,_and_ATPase,_AAA-3


id: CL:355
description: Mixed, incl. phenylalanyl-tRNA aminoacylation, and Potassium ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:355_Mixed,_incl._phenylalanyl-tRNA_aminoacylation,_and_Potassium_ion_transport


id: CL:357
description: phenylalanyl-tRNA aminoacylation, and Cation transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:357_phenylalanyl-tRNA_aminoacylation,_and_Cation_transporter


id: CL:3573
description: Mixed, incl. Helix-turn-helix XRE-family like proteins, and Protein lipoylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3573_Mixed,_incl._Helix-turn-helix_XRE-family_like_proteins,_and_Protein_lipoylation


id: CL:3575
description: Mixed, incl. Helix-turn-helix XRE-family like proteins, and Cation efflux family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3575_Mixed,_incl._Helix-turn-helix_XRE-family_like_proteins,_and_Cation_efflux_family


id: CL:3577
description: Mixed, incl. Cation efflux family, and Cysteine desulfurase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3577_Mixed,_incl._Cation_efflux_family,_and_Cysteine_desulfurase


id: CL:3591
description: Mixed, incl. Helix-turn-helix XRE-family like proteins, and Papain-like cysteine protease AvrRpt2
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3591_Mixed,_incl._Helix-turn-helix_XRE-family_like_proteins,_and_Papain-like_cysteine_protease_AvrRpt2


id: CL:3613
description: Mixed, incl. Protein lipoylation, and Lysine degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3613_Mixed,_incl._Protein_lipoylation,_and_Lysine_degradation


id: CL:3628
description: Mixed, incl. ABC transporters, and Tetrapyrrole metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3628_Mixed,_incl._ABC_transporters,_and_Tetrapyrrole_metabolic_process


id: CL:3629
description: Mixed, incl. Mtb iron assimilation by chelation, and ABC transporters
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3629_Mixed,_incl._Mtb_iron_assimilation_by_chelation,_and_ABC_transporters


id: CL:3630
description: Mixed, incl. Mtb iron assimilation by chelation, and Sulfur metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3630_Mixed,_incl._Mtb_iron_assimilation_by_chelation,_and_Sulfur_metabolism


id: CL:3631
description: Mixed, incl. Mtb iron assimilation by chelation, and ECF transporter, substrate-specific component
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3631_Mixed,_incl._Mtb_iron_assimilation_by_chelation,_and_ECF_transporter,_substrate-specific_component


id: CL:3632
description: Mixed, incl. Mtb iron assimilation by chelation, and ABC-2 transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3632_Mixed,_incl._Mtb_iron_assimilation_by_chelation,_and_ABC-2_transporter


id: CL:3633
description: Mixed, incl. Mtb iron assimilation by chelation, and ABC-2 transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3633_Mixed,_incl._Mtb_iron_assimilation_by_chelation,_and_ABC-2_transporter


id: CL:3634
description: Type 1 protein exporter, and ABC-2 transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3634_Type_1_protein_exporter,_and_ABC-2_transporter


id: CL:3636
description: Type 1 protein exporter, and ABC-2 transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3636_Type_1_protein_exporter,_and_ABC-2_transporter


id: CL:3637
description: Type 1 protein exporter, and ABC-2 transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3637_Type_1_protein_exporter,_and_ABC-2_transporter


id: CL:3639
description: Mtb iron assimilation by chelation, and ABC transporter transmembrane region
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3639_Mtb_iron_assimilation_by_chelation,_and_ABC_transporter_transmembrane_region


id: CL:3660
description: Mixed, incl. ABC-2 family transporter protein, and 50S ribosome-binding GTPase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3660_Mixed,_incl._ABC-2_family_transporter_protein,_and_50S_ribosome-binding_GTPase


id: CL:3684
description: Helix_turn_helix multiple antibiotic resistance protein, and Mtb iron assimilation by chelation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3684_Helix_turn_helix_multiple_antibiotic_resistance_protein,_and_Mtb_iron_assimilation_by_chelation


id: CL:3696
description: Mixed, incl. Aldo-keto reductase, and Methyltransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3696_Mixed,_incl._Aldo-keto_reductase,_and_Methyltransferase_domain


id: CL:3706
description: Mixed, incl. Protein dehydration, and ECF transporter, substrate-specific component
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3706_Mixed,_incl._Protein_dehydration,_and_ECF_transporter,_substrate-specific_component


id: CL:3718
description: Mixed, incl. Sulfur metabolism, and Nitrogen cycle metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3718_Mixed,_incl._Sulfur_metabolism,_and_Nitrogen_cycle_metabolic_process


id: CL:3720
description: Mixed, incl. ABC-2 family transporter protein, and Thioredoxin-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3720_Mixed,_incl._ABC-2_family_transporter_protein,_and_Thioredoxin-like_superfamily


id: CL:3753
description: Mixed, incl. NRAMP family, and Oxoprolinase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3753_Mixed,_incl._NRAMP_family,_and_Oxoprolinase_family


id: CL:3755
description: Mixed, incl. NRAMP family, and Antioxidant activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3755_Mixed,_incl._NRAMP_family,_and_Antioxidant_activity


id: CL:3757
description: Mixed, incl. Hydantoinase/oxoprolinase, and Ureohydrolase domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3757_Mixed,_incl._Hydantoinase/oxoprolinase,_and_Ureohydrolase_domain_superfamily


id: CL:3792
description: Mixed, incl. Tetrapyrrole metabolic process, and Bacterial microcompartment
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3792_Mixed,_incl._Tetrapyrrole_metabolic_process,_and_Bacterial_microcompartment


id: CL:3793
description: Mixed, incl. Cobalamin metabolic process, and Bacterial microcompartment
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3793_Mixed,_incl._Cobalamin_metabolic_process,_and_Bacterial_microcompartment


id: CL:3795
description: Mixed, incl. Cobalamin metabolic process, and Porphyrin biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3795_Mixed,_incl._Cobalamin_metabolic_process,_and_Porphyrin_biosynthesis


id: CL:3796
description: Cobalamin metabolic process, and Porphyrin biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3796_Cobalamin_metabolic_process,_and_Porphyrin_biosynthesis


id: CL:3798
description: Cobalamin metabolic process, and Porphyrin biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3798_Cobalamin_metabolic_process,_and_Porphyrin_biosynthesis


id: CL:3804
description: Tetrapyrrole methylase, subdomain 2, and Glutaminase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3804_Tetrapyrrole_methylase,_subdomain_2,_and_Glutaminase_complex


id: CL:3850
description: Cobalt ion transport, and ABC transporter, CbiO/EcfA subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3850_Cobalt_ion_transport,_and_ABC_transporter,_CbiO/EcfA_subunit


id: CL:3851
description: Cobalt ion transport, and ABC transporter, CbiO/EcfA subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3851_Cobalt_ion_transport,_and_ABC_transporter,_CbiO/EcfA_subunit


id: CL:3866
description: ABC transporter, CbiO/EcfA subunit, and tRNA pseudouridine synthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3866_ABC_transporter,_CbiO/EcfA_subunit,_and_tRNA_pseudouridine_synthesis


id: CL:3875
description: Mixed, incl. 4Fe-4S double cluster binding domain, and Endonuclease III-like, conserved site-2
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3875_Mixed,_incl._4Fe-4S_double_cluster_binding_domain,_and_Endonuclease_III-like,_conserved_site-2


id: CL:3887
description: Bacterial microcompartment, and DeoR-type HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3887_Bacterial_microcompartment,_and_DeoR-type_HTH_domain


id: CL:3888
description: Bacterial microcompartment, and DeoR-type HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3888_Bacterial_microcompartment,_and_DeoR-type_HTH_domain


id: CL:3892
description: Cobalamin binding, and cob(I)yrinic acid a,c-diamide adenosyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3892_Cobalamin_binding,_and_cob(I)yrinic_acid_a,c-diamide_adenosyltransferase_activity


id: CL:3919
description: Mixed, incl. FMN-binding split barrel, and Endonuclease III-like, conserved site-2
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3919_Mixed,_incl._FMN-binding_split_barrel,_and_Endonuclease_III-like,_conserved_site-2


id: CL:3935
description: Mixed, incl. Non-homologous end-joining, and Uracil DNA N-glycosylase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3935_Mixed,_incl._Non-homologous_end-joining,_and_Uracil_DNA_N-glycosylase_activity


id: CL:3937
description: Mixed, incl. Non-homologous end-joining, and Nucleoside phosphorylase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3937_Mixed,_incl._Non-homologous_end-joining,_and_Nucleoside_phosphorylase_superfamily


id: CL:394
description: Mixed, incl. Chaperone, and Endopeptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:394_Mixed,_incl._Chaperone,_and_Endopeptidase_activity


id: CL:395
description: Protein folding, and ATP-dependent peptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:395_Protein_folding,_and_ATP-dependent_peptidase_activity


id: CL:3956
description: Mixed, incl. Major facilitator superfamily domain, and Aldo/keto reductase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3956_Mixed,_incl._Major_facilitator_superfamily_domain,_and_Aldo/keto_reductase_family


id: CL:3957
description: Mixed, incl. Aldo/keto reductase family, and Multi antimicrobial extrusion protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3957_Mixed,_incl._Aldo/keto_reductase_family,_and_Multi_antimicrobial_extrusion_protein


id: CL:3958
description: Mixed, incl. Aldo/keto reductase family, and Flavoprotein-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3958_Mixed,_incl._Aldo/keto_reductase_family,_and_Flavoprotein-like_superfamily


id: CL:3960
description: Mixed, incl. Aldo/keto reductase family, and Domain of unknown function DUF362
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3960_Mixed,_incl._Aldo/keto_reductase_family,_and_Domain_of_unknown_function_DUF362


id: CL:3962
description: Mixed, incl. Flavodoxin, and MerR-type HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3962_Mixed,_incl._Flavodoxin,_and_MerR-type_HTH_domain


id: CL:397
description: Protein folding, and ATP-dependent peptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:397_Protein_folding,_and_ATP-dependent_peptidase_activity


id: CL:3979
description: Domain of unknown function DUF362, and 4Fe-4S dicluster domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:3979_Domain_of_unknown_function_DUF362,_and_4Fe-4S_dicluster_domain


id: CL:399
description: Protein folding, and Lon protease
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:399_Protein_folding,_and_Lon_protease


id: CL:4004
description: Mixed, incl. Multi antimicrobial extrusion protein, and Acyl-CoA N-acyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4004_Mixed,_incl._Multi_antimicrobial_extrusion_protein,_and_Acyl-CoA_N-acyltransferase


id: CL:4006
description: Multi antimicrobial extrusion protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4006_Multi_antimicrobial_extrusion_protein


id: CL:4022
description: Mixed, incl. WD40-like beta propeller, and Prokaryotic transglycosylase, active site
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4022_Mixed,_incl._WD40-like_beta_propeller,_and_Prokaryotic_transglycosylase,_active_site


id: CL:4038
description: Mixed, incl. AhpD-like, and Major facilitator superfamily domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4038_Mixed,_incl._AhpD-like,_and_Major_facilitator_superfamily_domain


id: CL:4040
description: AhpD-like, and HxlR-like helix-turn-helix
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4040_AhpD-like,_and_HxlR-like_helix-turn-helix


id: CL:4056
description: Mixed, incl. Gdt1 family, and HTH-type transcriptional repressor KstR2, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4056_Mixed,_incl._Gdt1_family,_and_HTH-type_transcriptional_repressor_KstR2,_C-terminal


id: CL:4067
description: Mixed, incl. Carbohydrate metabolic process, and UROD/MetE-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4067_Mixed,_incl._Carbohydrate_metabolic_process,_and_UROD/MetE-like_superfamily


id: CL:4068
description: Mixed, incl. UROD/MetE-like superfamily, and Carotenoid biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4068_Mixed,_incl._UROD/MetE-like_superfamily,_and_Carotenoid_biosynthesis


id: CL:4069
description: Mixed, incl. UROD/MetE-like superfamily, and Inositol phosphate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4069_Mixed,_incl._UROD/MetE-like_superfamily,_and_Inositol_phosphate_metabolism


id: CL:4070
description: Mixed, incl. UROD/MetE-like superfamily, and Inositol phosphate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4070_Mixed,_incl._UROD/MetE-like_superfamily,_and_Inositol_phosphate_metabolism


id: CL:4071
description: Mixed, incl. UROD/MetE-like superfamily, and Inositol phosphate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4071_Mixed,_incl._UROD/MetE-like_superfamily,_and_Inositol_phosphate_metabolism


id: CL:4072
description: Mixed, incl. UROD/MetE-like superfamily, and Inositol phosphate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4072_Mixed,_incl._UROD/MetE-like_superfamily,_and_Inositol_phosphate_metabolism


id: CL:4074
description: UROD/MetE-like superfamily, and B12 binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4074_UROD/MetE-like_superfamily,_and_B12_binding_domain


id: CL:4076
description: Uroporphyrinogen decarboxylase (URO-D), and Methionine synthase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4076_Uroporphyrinogen_decarboxylase_(URO-D),_and_Methionine_synthase_activity


id: CL:4121
description: Mixed, incl. Inositol phosphate metabolism, and Lipid catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4121_Mixed,_incl._Inositol_phosphate_metabolism,_and_Lipid_catabolic_process


id: CL:4123
description: Inositol phosphate metabolism, and Lipid catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4123_Inositol_phosphate_metabolism,_and_Lipid_catabolic_process


id: CL:4139
description: Mixed, incl. Vicinal oxygen chelate (VOC) domain, and Ascorbate and aldarate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4139_Mixed,_incl._Vicinal_oxygen_chelate_(VOC)_domain,_and_Ascorbate_and_aldarate_metabolism


id: CL:4153
description: Mixed, incl. Ferritin-like, and HD-GYP domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4153_Mixed,_incl._Ferritin-like,_and_HD-GYP_domain


id: CL:4163
description: Mixed, incl. L-arabinose isomerase activity, and MFS_1 like family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4163_Mixed,_incl._L-arabinose_isomerase_activity,_and_MFS_1_like_family


id: CL:4180
description: Mixed, incl. Pseudouridine synthase, RsuA/RluB/E/F, and Alpha/Beta hydrolase fold
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4180_Mixed,_incl._Pseudouridine_synthase,_RsuA/RluB/E/F,_and_Alpha/Beta_hydrolase_fold


id: CL:4190
description: Carotenoid biosynthesis, and Biosynthesis of siderophore group nonribosomal peptides
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4190_Carotenoid_biosynthesis,_and_Biosynthesis_of_siderophore_group_nonribosomal_peptides


id: CL:4191
description: Carotenoid biosynthesis, and Biosynthesis of siderophore group nonribosomal peptides
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4191_Carotenoid_biosynthesis,_and_Biosynthesis_of_siderophore_group_nonribosomal_peptides


id: CL:4192
description: Carotenoid biosynthesis, and Domain of unknown function DUF4351
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4192_Carotenoid_biosynthesis,_and_Domain_of_unknown_function_DUF4351


id: CL:4195
description: Transposase, putative, helix-turn-helix domain, and Putative transposase DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4195_Transposase,_putative,_helix-turn-helix_domain,_and_Putative_transposase_DNA-binding_domain


id: CL:4215
description: Mixed, incl. Domain of unknown function DUF4351, and Tautomerase enzyme
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4215_Mixed,_incl._Domain_of_unknown_function_DUF4351,_and_Tautomerase_enzyme


id: CL:4232
description: Transposase IS200-like, and HUH transposase Y1 type
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4232_Transposase_IS200-like,_and_HUH_transposase_Y1_type


id: CL:4242
description: DNA integration, and Carotenoid biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4242_DNA_integration,_and_Carotenoid_biosynthesis


id: CL:4252
description: Mixed, incl. Inositol catabolic process, and Xylose isomerase-like TIM barrel
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4252_Mixed,_incl._Inositol_catabolic_process,_and_Xylose_isomerase-like_TIM_barrel


id: CL:4253
description: Mixed, incl. Inositol catabolic process, and Xylose isomerase-like TIM barrel
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4253_Mixed,_incl._Inositol_catabolic_process,_and_Xylose_isomerase-like_TIM_barrel


id: CL:4254
description: Mixed, incl. Inositol catabolic process, and Xylose isomerase-like TIM barrel
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4254_Mixed,_incl._Inositol_catabolic_process,_and_Xylose_isomerase-like_TIM_barrel


id: CL:4255
description: Inositol catabolic process, and Xylose isomerase-like TIM barrel
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4255_Inositol_catabolic_process,_and_Xylose_isomerase-like_TIM_barrel


id: CL:4256
description: Inositol catabolic process, and Xylose isomerase-like TIM barrel
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4256_Inositol_catabolic_process,_and_Xylose_isomerase-like_TIM_barrel


id: CL:4257
description: Inositol catabolic process, and Xylose isomerase-like TIM barrel
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4257_Inositol_catabolic_process,_and_Xylose_isomerase-like_TIM_barrel


id: CL:4259
description: Inositol catabolic process, and Xylose isomerase-like TIM barrel
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4259_Inositol_catabolic_process,_and_Xylose_isomerase-like_TIM_barrel


id: CL:4260
description: Inositol catabolic process, and Xylose isomerase-like TIM barrel
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4260_Inositol_catabolic_process,_and_Xylose_isomerase-like_TIM_barrel


id: CL:4263
description: Xylose isomerase-like TIM barrel
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4263_Xylose_isomerase-like_TIM_barrel


id: CL:4278
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4278_Mixed,_incl._Trehalose_catabolism_protein,_ThuA,_prokaryote,_and_3,4-dihydroxybenzoate_metabolic_process

description:
  Mixed, incl. Trehalose catabolism protein, ThuA, prokaryote, and 3,4-dihydroxybenzoate metabolic process


id: CL:4289
description: Mixed, incl. Response to bacterium, and pfkB family carbohydrate kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4289_Mixed,_incl._Response_to_bacterium,_and_pfkB_family_carbohydrate_kinase


id: CL:4308
description: Oxidoreductase family, C-terminal alpha/beta domain, and 3,4-dihydroxybenzoate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4308_Oxidoreductase_family,_C-terminal_alpha/beta_domain,_and_3,4-dihydroxybenzoate_metabolic_process


id: CL:4322
description: Mixed, incl. DeoR-type HTH domain, and Creatinase, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4322_Mixed,_incl._DeoR-type_HTH_domain,_and_Creatinase,_N-terminal


id: CL:4337
description: Mixed, incl. Pentose catabolic process, and Glycerol dehydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4337_Mixed,_incl._Pentose_catabolic_process,_and_Glycerol_dehydrogenase


id: CL:4354
description: Mixed, incl. Phosphate transporter, and RpiR-like, SIS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4354_Mixed,_incl._Phosphate_transporter,_and_RpiR-like,_SIS_domain


id: CL:4357
description: Mixed, incl. RpiR-like, SIS domain, and Putative N-acetylmannosamine-6-phosphate epimerase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4357_Mixed,_incl._RpiR-like,_SIS_domain,_and_Putative_N-acetylmannosamine-6-phosphate_epimerase


id: CL:4378
description: Mixed, incl. AraC-like ligand binding domain, and Sigma-70, region 4
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4378_Mixed,_incl._AraC-like_ligand_binding_domain,_and_Sigma-70,_region_4


id: CL:4394
description: Mixed, incl. Cobalt ion binding, and RNA polymerase sigma factor 70, region 4 type 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4394_Mixed,_incl._Cobalt_ion_binding,_and_RNA_polymerase_sigma_factor_70,_region_4_type_2


id: CL:4414
description: Hydrolase activity, hydrolyzing O-glycosyl compounds, and Six-hairpin glycosidase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4414_Hydrolase_activity,_hydrolyzing_O-glycosyl_compounds,_and_Six-hairpin_glycosidase_superfamily


id: CL:4416
description: Glycoside hydrolase superfamily, and Six-hairpin glycosidase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4416_Glycoside_hydrolase_superfamily,_and_Six-hairpin_glycosidase_superfamily


id: CL:4417
description: Glycoside hydrolase superfamily, and Six-hairpin glycosidase-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4417_Glycoside_hydrolase_superfamily,_and_Six-hairpin_glycosidase-like_superfamily


id: CL:4418
description: Glycoside hydrolase superfamily, and Six-hairpin glycosidase-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4418_Glycoside_hydrolase_superfamily,_and_Six-hairpin_glycosidase-like_superfamily


id: CL:4419
description: Galactosidase activity, and Alpha-L-rhamnosidase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4419_Galactosidase_activity,_and_Alpha-L-rhamnosidase


id: CL:4423
description: Sphingolipid metabolism, and Beta-galactosidase, domain 4
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4423_Sphingolipid_metabolism,_and_Beta-galactosidase,_domain_4


id: CL:443
description: Mixed, incl. Radical SAM, alpha/beta horseshoe, and Ribosome biogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:443_Mixed,_incl._Radical_SAM,_alpha/beta_horseshoe,_and_Ribosome_biogenesis


id: CL:444
description: Mixed, incl. Ribosome biogenesis, and AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:444_Mixed,_incl._Ribosome_biogenesis,_and_AAA_domain


id: CL:4440
description: Beta-galactosidase complex, and Alpha-L-rhamnosidase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4440_Beta-galactosidase_complex,_and_Alpha-L-rhamnosidase


id: CL:4453
description: Mixed, incl. Glycoside hydrolase, family 5, and Fibronectin type III-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4453_Mixed,_incl._Glycoside_hydrolase,_family_5,_and_Fibronectin_type_III-like_domain


id: CL:4455
description: Glycoside hydrolase, family 5, and Fibronectin type III-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4455_Glycoside_hydrolase,_family_5,_and_Fibronectin_type_III-like_domain


id: CL:446
description: Mixed, incl. AAA domain, and K Homology domain, type 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:446_Mixed,_incl._AAA_domain,_and_K_Homology_domain,_type_2


id: CL:4467
description: Glycoside hydrolase-type carbohydrate-binding, and Galactose mutarotase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4467_Glycoside_hydrolase-type_carbohydrate-binding,_and_Galactose_mutarotase-like


id: CL:4481
description: Mixed, incl. Alpha-L-fucosidase, and Beta-hexosaminidase-like, domain 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4481_Mixed,_incl._Alpha-L-fucosidase,_and_Beta-hexosaminidase-like,_domain_2


id: CL:4502
description: Mixed, incl. Six-hairpin glycosidase superfamily, and Beta-hexosaminidase-like, domain 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4502_Mixed,_incl._Six-hairpin_glycosidase_superfamily,_and_Beta-hexosaminidase-like,_domain_2


id: CL:4505
description: Mixed, incl. Beta-L-arabinofuranosidase, GH127, and Beta-hexosaminidase-like, domain 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4505_Mixed,_incl._Beta-L-arabinofuranosidase,_GH127,_and_Beta-hexosaminidase-like,_domain_2


id: CL:4534
description: Mixed, incl. Queuosine biosynthesis, and ABC-2 family transporter protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4534_Mixed,_incl._Queuosine_biosynthesis,_and_ABC-2_family_transporter_protein


id: CL:4535
description: Mixed, incl. Queuosine biosynthesis, and ABC-2 transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4535_Mixed,_incl._Queuosine_biosynthesis,_and_ABC-2_transporter


id: CL:4545
description: Mixed, incl. ABC-2 transporter, and Beta-L-arabinofuranosidase, GH127
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4545_Mixed,_incl._ABC-2_transporter,_and_Beta-L-arabinofuranosidase,_GH127


id: CL:4554
description: Sodium ion transmembrane transport, and Hexose catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4554_Sodium_ion_transmembrane_transport,_and_Hexose_catabolic_process


id: CL:4563
description: MetI-like superfamily, and Bacterial extracellular solute-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4563_MetI-like_superfamily,_and_Bacterial_extracellular_solute-binding_protein


id: CL:4564
description: MetI-like superfamily, and Bacterial extracellular solute-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4564_MetI-like_superfamily,_and_Bacterial_extracellular_solute-binding_protein


id: CL:4565
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4565_Binding-protein-dependent_transport_system_inner_membrane_component,_and_Bacterial_extracellular_solute-binding_protein

description:
  Binding-protein-dependent transport system inner membrane component, and Bacterial extracellular solute-binding protein


id: CL:4567
description: Mixed, incl. Sugar transport, and ABC-type maltose transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4567_Mixed,_incl._Sugar_transport,_and_ABC-type_maltose_transporter_activity


id: CL:4569
description: Sugar transport, and TOBE domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4569_Sugar_transport,_and_TOBE_domain


id: CL:4571
description: Sugar transport, and TOBE domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4571_Sugar_transport,_and_TOBE_domain


id: CL:4627
description: Mixed, incl. Six-bladed beta-propeller, TolB-like, and ABC-type maltose transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4627_Mixed,_incl._Six-bladed_beta-propeller,_TolB-like,_and_ABC-type_maltose_transporter_activity


id: CL:463
description: Mixed, incl. Radical SAM, alpha/beta horseshoe, and HIT-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:463_Mixed,_incl._Radical_SAM,_alpha/beta_horseshoe,_and_HIT-like_superfamily


id: CL:4642
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4642_Mixed,_incl._Ligand-gated_channel_activity,_and_Amino_acid_ABC_transporter,_permease_protein,_3-TM_domain

description:
  Mixed, incl. Ligand-gated channel activity, and Amino acid ABC transporter, permease protein, 3-TM domain


id: CL:4644
description: Ligand-gated channel activity, and Amino acid ABC transporter, permease protein, 3-TM domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4644_Ligand-gated_channel_activity,_and_Amino_acid_ABC_transporter,_permease_protein,_3-TM_domain


id: CL:4658
description: Mixed, incl. Hemerythrin-like, and Protein of unknown function (DUF441)
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4658_Mixed,_incl._Hemerythrin-like,_and_Protein_of_unknown_function_(DUF441)


id: CL:4674
description: Mixed, incl. Sulfur compound metabolic process, and Nitrogen cycle metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4674_Mixed,_incl._Sulfur_compound_metabolic_process,_and_Nitrogen_cycle_metabolic_process


id: CL:4675
description: Mixed, incl. Thiamine biosynthetic process, and Nitrogen fixation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4675_Mixed,_incl._Thiamine_biosynthetic_process,_and_Nitrogen_fixation


id: CL:4676
description: Mixed, incl. Nitrogen fixation, and CobQ/CobB/MinD/ParA nucleotide binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4676_Mixed,_incl._Nitrogen_fixation,_and_CobQ/CobB/MinD/ParA_nucleotide_binding_domain


id: CL:4677
description: Mixed, incl. Nitrogen fixation, and CobQ/CobB/MinD/ParA nucleotide binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4677_Mixed,_incl._Nitrogen_fixation,_and_CobQ/CobB/MinD/ParA_nucleotide_binding_domain


id: CL:4679
description: Nitrogen fixation, and CobQ/CobB/MinD/ParA nucleotide binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4679_Nitrogen_fixation,_and_CobQ/CobB/MinD/ParA_nucleotide_binding_domain


id: CL:4682
description: MTH1175 domain, and CobQ/CobB/MinD/ParA nucleotide binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4682_MTH1175_domain,_and_CobQ/CobB/MinD/ParA_nucleotide_binding_domain


id: CL:4695
description: Nitrogen fixation, and CobQ/CobB/MinD/ParA nucleotide binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4695_Nitrogen_fixation,_and_CobQ/CobB/MinD/ParA_nucleotide_binding_domain


id: CL:4711
description: Predicted permease DUF318, and Cyclic nucleotide-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4711_Predicted_permease_DUF318,_and_Cyclic_nucleotide-binding_domain


id: CL:4721
description: Mixed, incl. Heme transport, and Helix-turn-helix, type 11
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4721_Mixed,_incl._Heme_transport,_and_Helix-turn-helix,_type_11


id: CL:4722
description: Mixed, incl. Heme transport, and Zinc finger, DksA/TraR C4-type
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4722_Mixed,_incl._Heme_transport,_and_Zinc_finger,_DksA/TraR_C4-type


id: CL:4731
description: Mixed, incl. Helix-turn-helix, type 11, and Sigma-54 interaction domain, ATP-binding site 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4731_Mixed,_incl._Helix-turn-helix,_type_11,_and_Sigma-54_interaction_domain,_ATP-binding_site_1


id: CL:4743
description: Mixed, incl. Thiamine biosynthetic process, and Beta-Casp domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4743_Mixed,_incl._Thiamine_biosynthetic_process,_and_Beta-Casp_domain


id: CL:4745
description: Thiamine biosynthetic process, and Cytosine permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4745_Thiamine_biosynthetic_process,_and_Cytosine_permease


id: CL:4747
description: Thiazole synthase activity, and ThiH/NocL/HydG-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4747_Thiazole_synthase_activity,_and_ThiH/NocL/HydG-like


id: CL:475
description: Mostly uncharacterized, incl. Proteasome, and Beta-Casp domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:475_Mostly_uncharacterized,_incl._Proteasome,_and_Beta-Casp_domain


id: CL:476
description: Mixed, incl. Proteasome, and Beta-Casp domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:476_Mixed,_incl._Proteasome,_and_Beta-Casp_domain


id: CL:4774
description: Mixed, incl. Response to arsenic-containing substance, and Amino acid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4774_Mixed,_incl._Response_to_arsenic-containing_substance,_and_Amino_acid_transport


id: CL:4776
description: Mixed, incl. Response to arsenic-containing substance, and Predicted permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4776_Mixed,_incl._Response_to_arsenic-containing_substance,_and_Predicted_permease


id: CL:4778
description: Mixed, incl. Response to arsenic-containing substance, and Uncharacterized ACR, COG1993
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4778_Mixed,_incl._Response_to_arsenic-containing_substance,_and_Uncharacterized_ACR,_COG1993


id: CL:4797
description: Mixed, incl. Predicted permease, and Redox-active disulphide protein 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4797_Mixed,_incl._Predicted_permease,_and_Redox-active_disulphide_protein_2


id: CL:4835
description: Mostly uncharacterized, incl. Tricarboxylic acid cycle, and DapA-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4835_Mostly_uncharacterized,_incl._Tricarboxylic_acid_cycle,_and_DapA-like


id: CL:4836
description: Mixed, incl. Tricarboxylic acid cycle, and DapA-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4836_Mixed,_incl._Tricarboxylic_acid_cycle,_and_DapA-like


id: CL:4838
description: Tricarboxylic acid cycle, and Alditol metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4838_Tricarboxylic_acid_cycle,_and_Alditol_metabolic_process


id: CL:4857
description: Mixed, incl. Omega peptidase activity, and Carboxypeptidase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4857_Mixed,_incl._Omega_peptidase_activity,_and_Carboxypeptidase


id: CL:4868
description: Mostly uncharacterized, incl. RAMP superfamily, and DNA integration
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4868_Mostly_uncharacterized,_incl._RAMP_superfamily,_and_DNA_integration


id: CL:4869
description: Mostly uncharacterized, incl. RAMP superfamily, and DNA integration
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4869_Mostly_uncharacterized,_incl._RAMP_superfamily,_and_DNA_integration


id: CL:4870
description: Mixed, incl. DNA integration, and Nitrogen metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4870_Mixed,_incl._DNA_integration,_and_Nitrogen_metabolism


id: CL:4871
description: Mostly uncharacterized, incl. Hemerythrin-like, and Domain of unknown function DUF1232
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4871_Mostly_uncharacterized,_incl._Hemerythrin-like,_and_Domain_of_unknown_function_DUF1232


id: CL:4872
description: Mixed, incl. Hemerythrin-like, and Domain of unknown function DUF1232
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4872_Mixed,_incl._Hemerythrin-like,_and_Domain_of_unknown_function_DUF1232


id: CL:4883
description: Mixed, incl. Protein of unknown function (DUF441), and Ribbon-helix-helix
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4883_Mixed,_incl._Protein_of_unknown_function_(DUF441),_and_Ribbon-helix-helix


id: CL:489
description: Mixed, incl. SNF2, N-terminal, and OmpA family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:489_Mixed,_incl._SNF2,_N-terminal,_and_OmpA_family


id: CL:4893
description: Mixed, incl. Homeodomain-like domain, and PepSY domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4893_Mixed,_incl._Homeodomain-like_domain,_and_PepSY_domain


id: CL:4911
description: Mixed, incl. RAMP superfamily, and Fermentation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4911_Mixed,_incl._RAMP_superfamily,_and_Fermentation


id: CL:4930
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4930_Mixed,_incl._Regulation_of_cell_communication,_and_HTH-type_transcriptional_repressor_KstR2,_C-terminal

description:
  Mixed, incl. Regulation of cell communication, and HTH-type transcriptional repressor KstR2, C-terminal


id: CL:4940
description: Mixed, incl. Spo0E like sporulation regulatory protein, and tRNA 3-end processing
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4940_Mixed,_incl._Spo0E_like_sporulation_regulatory_protein,_and_tRNA_3-end_processing


id: CL:4951
description: Mixed, incl. Peptidase M42, and Proteasome
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4951_Mixed,_incl._Peptidase_M42,_and_Proteasome


id: CL:4952
description: Mixed, incl. Peptidase M42, and Proteasome
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4952_Mixed,_incl._Peptidase_M42,_and_Proteasome


id: CL:4954
description: Peptidase M42, and Band 7 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4954_Peptidase_M42,_and_Band_7_domain


id: CL:4966
description: Mixed, incl. Proteasome, and Negative regulation of translation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4966_Mixed,_incl._Proteasome,_and_Negative_regulation_of_translation


id: CL:4977
description: Mixed, incl. Clp protease, and Adenosine deaminase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4977_Mixed,_incl._Clp_protease,_and_Adenosine_deaminase_activity


id: CL:498
description: Mixed, incl. Coenzyme A metabolic process, and rRNA methylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:498_Mixed,_incl._Coenzyme_A_metabolic_process,_and_rRNA_methylation


id: CL:4991
description: Mixed, incl. Peptidoglycan binding, and Ubiquinone metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:4991_Mixed,_incl._Peptidoglycan_binding,_and_Ubiquinone_metabolic_process


id: CL:5009
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:5009_Mostly_uncharacterized,_incl._Evasion_of_host_immune_response,_and_Prokaryotic_N-terminal_methylation_site

description:
  Mostly uncharacterized, incl. Evasion of host immune response, and Prokaryotic N-terminal methylation site


id: CL:501
description: Mixed, incl. rRNA methyltransferase activity, and Formyl transferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:501_Mixed,_incl._rRNA_methyltransferase_activity,_and_Formyl_transferase


id: CL:5011
description: Mixed, incl. Evasion of host immune response, and Prokaryotic N-terminal methylation site
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:5011_Mixed,_incl._Evasion_of_host_immune_response,_and_Prokaryotic_N-terminal_methylation_site


id: CL:5012
description: Mixed, incl. Holliday junction resolvase RusA-like superfamily, and Regulation of cell division
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:5012_Mixed,_incl._Holliday_junction_resolvase_RusA-like_superfamily,_and_Regulation_of_cell_division


id: CL:5014
description: Negative regulation of transcription, DNA-templated, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:5014_Negative_regulation_of_transcription,_DNA-templated,_and_Signal


id: CL:5033
description: Mixed, incl. ParB-like nuclease domain, and Prokaryotic N-terminal methylation site
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:5033_Mixed,_incl._ParB-like_nuclease_domain,_and_Prokaryotic_N-terminal_methylation_site


id: CL:504
description: rRNA methyltransferase activity, and Formyl transferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:504_rRNA_methyltransferase_activity,_and_Formyl_transferase


id: CL:5058
description: Mostly uncharacterized, incl. Helix-turn-helix XRE-family like proteins, and Primosome complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:5058_Mostly_uncharacterized,_incl._Helix-turn-helix_XRE-family_like_proteins,_and_Primosome_complex


id: CL:5059
description: Mixed, incl. Helix-turn-helix XRE-family like proteins, and Primosome complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:5059_Mixed,_incl._Helix-turn-helix_XRE-family_like_proteins,_and_Primosome_complex


id: CL:5060
description: Mixed, incl. Primosome complex, and DNA alkylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:5060_Mixed,_incl._Primosome_complex,_and_DNA_alkylation


id: CL:5061
description: Mixed, incl. DNA alkylation, and RecD-like DNA helicase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:5061_Mixed,_incl._DNA_alkylation,_and_RecD-like_DNA_helicase


id: CL:5083
description: Mixed, incl. Helix-turn-helix XRE-family like proteins, and Deubiquitinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:5083_Mixed,_incl._Helix-turn-helix_XRE-family_like_proteins,_and_Deubiquitinase_activity


id: CL:5096
description: Mostly uncharacterized, incl. PhoU domain, and Radical SAM superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:5096_Mostly_uncharacterized,_incl._PhoU_domain,_and_Radical_SAM_superfamily


id: CL:5098
description: Mixed, incl. Radical SAM superfamily, and Signal peptide processing
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:5098_Mixed,_incl._Radical_SAM_superfamily,_and_Signal_peptide_processing


id: CL:5119
description: Mixed, incl. Transposase activity, and ABC-2 transporter-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:5119_Mixed,_incl._Transposase_activity,_and_ABC-2_transporter-like


id: CL:5121
description: Mixed, incl. ABC-2 transporter-like, and Nickel insertion protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:5121_Mixed,_incl._ABC-2_transporter-like,_and_Nickel_insertion_protein


id: CL:5123
description: Mixed, incl. ABC-2 transporter-like, and Nickel insertion protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:5123_Mixed,_incl._ABC-2_transporter-like,_and_Nickel_insertion_protein


id: CL:5126
description: Nickel insertion protein, and PurE domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:5126_Nickel_insertion_protein,_and_PurE_domain


id: CL:5141
description: ABC-2 transporter-like, and ABC transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:5141_ABC-2_transporter-like,_and_ABC_transporter


id: CL:515
description: Mixed, incl. Protein kinase domain, and Thiamine diphosphokinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:515_Mixed,_incl._Protein_kinase_domain,_and_Thiamine_diphosphokinase_activity


id: CL:5155
description: ABC-2 transporter-like, and Transmembrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:5155_ABC-2_transporter-like,_and_Transmembrane


id: CL:5170
description: Mixed, incl. DDE transposase sub-family, and Transposition
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:5170_Mixed,_incl._DDE_transposase_sub-family,_and_Transposition


id: CL:5201
description: Solute-binding protein family 5, and Nickel cation transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:5201_Solute-binding_protein_family_5,_and_Nickel_cation_transmembrane_transporter_activity


id: CL:5204
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:5204_Nickel_cation_transmembrane_transporter_activity,_and_Oligopeptide/dipeptide_ABC_transporter,_C-terminal

description:
  Nickel cation transmembrane transporter activity, and Oligopeptide/dipeptide ABC transporter, C-terminal


id: CL:5209
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:5209_Nickel_cation_transmembrane_transporter_activity,_and_Oligopeptide/dipeptide_ABC_transporter,_C-terminal

description:
  Nickel cation transmembrane transporter activity, and Oligopeptide/dipeptide ABC transporter, C-terminal


id: CL:5213
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:5213_Nickel_cation_transmembrane_transporter_activity,_and_Oligopeptide/dipeptide_ABC_transporter,_C-terminal

description:
  Nickel cation transmembrane transporter activity, and Oligopeptide/dipeptide ABC transporter, C-terminal


id: CL:5230
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:5230_Nickel_cation_transmembrane_transporter_activity,_and_Oligopeptide/dipeptide_ABC_transporter,_C-terminal

description:
[cell repeats an earlier one in this file: 104 characters]


id: CL:5262
description: Branched-chain amino acid transport, and ABC transporter, permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:5262_Branched-chain_amino_acid_transport,_and_ABC_transporter,_permease


id: CL:5277
description: Mixed, incl. Regulation of growth, and ParB/Sulfiredoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:5277_Mixed,_incl._Regulation_of_growth,_and_ParB/Sulfiredoxin


id: CL:5278
description: Mixed, incl. Regulation of growth, and Protein of unknown function DUF3232
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:5278_Mixed,_incl._Regulation_of_growth,_and_Protein_of_unknown_function_DUF3232


id: CL:5280
description: Mixed, incl. Double-stranded DNA binding, and Magnesium ion binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:5280_Mixed,_incl._Double-stranded_DNA_binding,_and_Magnesium_ion_binding


id: CL:5296
description: Regulation of growth, and Deoxyribonucleotide catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:5296_Regulation_of_growth,_and_Deoxyribonucleotide_catabolic_process


id: CL:5324
description: Mixed, incl. AAA domain, and Helix-turn-helix domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:5324_Mixed,_incl._AAA_domain,_and_Helix-turn-helix_domain


id: CL:535
description: Mixed, incl. DNA damage, and DNA replication
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:535_Mixed,_incl._DNA_damage,_and_DNA_replication


id: CL:536
description: Mixed, incl. DNA damage, and DNA replication
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:536_Mixed,_incl._DNA_damage,_and_DNA_replication


id: CL:5365
description: Mixed, incl. Vancomycin resistance, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:5365_Mixed,_incl._Vancomycin_resistance,_and_Signal


id: CL:538
description: DNA replication, and DNA repair complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:538_DNA_replication,_and_DNA_repair_complex


id: CL:539
description: Mixed, incl. DNA replication, and DNA repair complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:539_Mixed,_incl._DNA_replication,_and_DNA_repair_complex


id: CL:540
description: DNA replication, and Topoisomerase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:540_DNA_replication,_and_Topoisomerase


id: CL:541
description: DNA biosynthetic process, and Topoisomerase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:541_DNA_biosynthetic_process,_and_Topoisomerase


id: CL:558
description: Mixed, incl. DNA topoisomerase, type IIA-like domain superfamily, and DNA clamp superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:558_Mixed,_incl._DNA_topoisomerase,_type_IIA-like_domain_superfamily,_and_DNA_clamp_superfamily


id: CL:570
description: DNA replication, synthesis of RNA primer, and Sigma-70 region 3
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:570_DNA_replication,_synthesis_of_RNA_primer,_and_Sigma-70_region_3


id: CL:579
description: SOS response, and Nucleotide excision repair
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:579_SOS_response,_and_Nucleotide_excision_repair


id: CL:58
description: Translation, and RNA metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:58_Translation,_and_RNA_metabolic_process


id: CL:581
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:581_DNA_recombination_and_repair_protein_RecA-like,_ATP-binding_domain,_and_DNA/RNA_polymerase_superfamily

description:
  DNA recombination and repair protein RecA-like, ATP-binding domain, and DNA/RNA polymerase superfamily


id: CL:59
description: Mixed, incl. Translation, and Protein export
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:59_Mixed,_incl._Translation,_and_Protein_export


id: CL:611
description: Mismatch repair, and LSM domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:611_Mismatch_repair,_and_LSM_domain_superfamily


id: CL:62
description: Mixed, incl. Ribosome, and Regulation of translation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:62_Mixed,_incl._Ribosome,_and_Regulation_of_translation


id: CL:628
description: Mixed, incl. Holliday junction helicase complex, and Queuosine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:628_Mixed,_incl._Holliday_junction_helicase_complex,_and_Queuosine_biosynthesis


id: CL:629
description: Mixed, incl. Aminoacyl-tRNA synthetase, class II, and ThiF family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:629_Mixed,_incl._Aminoacyl-tRNA_synthetase,_class_II,_and_ThiF_family


id: CL:63
description: Ribosome, and Regulation of translation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:63_Ribosome,_and_Regulation_of_translation


id: CL:64
description: Structural constituent of ribosome, and Regulation of translation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:64_Structural_constituent_of_ribosome,_and_Regulation_of_translation


id: CL:642
description: Mixed, incl. Holliday junction helicase complex, and Queuosine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:642_Mixed,_incl._Holliday_junction_helicase_complex,_and_Queuosine_biosynthesis


id: CL:65
description: Structural constituent of ribosome, and Regulation of translation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:65_Structural_constituent_of_ribosome,_and_Regulation_of_translation


id: CL:655
description: Mixed, incl. glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity, and DNA ligase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:655_Mixed,_incl._glutaminyl-tRNA_synthase_(glutamine-hydrolyzing)_activity,_and_DNA_ligase_activity


id: CL:66
description: Structural constituent of ribosome, and ATP synthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:66_Structural_constituent_of_ribosome,_and_ATP_synthesis


id: CL:668
description: Mixed, incl. ParB/Spo0J, HTH domain, and tRNA processing
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:668_Mixed,_incl._ParB/Spo0J,_HTH_domain,_and_tRNA_processing


id: CL:669
description: Mixed, incl. ParB/Spo0J, HTH domain, and tRNA processing
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:669_Mixed,_incl._ParB/Spo0J,_HTH_domain,_and_tRNA_processing


id: CL:671
description: Mixed, incl. MnmG, N-terminal domain, and rRNA base methylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:671_Mixed,_incl._MnmG,_N-terminal_domain,_and_rRNA_base_methylation


id: CL:68
description: Structural constituent of ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:68_Structural_constituent_of_ribosome,_and_Translation_regulator_activity


id: CL:688
description: Mixed, incl. GAF domain, and Gdt1 family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:688_Mixed,_incl._GAF_domain,_and_Gdt1_family


id: CL:69
description: Structural constituent of ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:69_Structural_constituent_of_ribosome,_and_Translation_regulator_activity


id: CL:699
description: Mixed, incl. Fatty acid metabolism, and Fatty acid biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:699_Mixed,_incl._Fatty_acid_metabolism,_and_Fatty_acid_biosynthetic_process


id: CL:700
description: Mixed, incl. Fatty acid metabolism, and Lipid biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:700_Mixed,_incl._Fatty_acid_metabolism,_and_Lipid_biosynthesis


id: CL:701
description: Mixed, incl. Fatty acid metabolism, and Lipid biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:701_Mixed,_incl._Fatty_acid_metabolism,_and_Lipid_biosynthesis


id: CL:702
description: Lipid biosynthesis, and Fatty acid biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:702_Lipid_biosynthesis,_and_Fatty_acid_biosynthesis


id: CL:704
description: Lipid biosynthesis, and Fatty acid biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:704_Lipid_biosynthesis,_and_Fatty_acid_biosynthesis


id: CL:722
description: Fatty acid synthesis protein, and Negative regulation of small molecule metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:722_Fatty_acid_synthesis_protein,_and_Negative_regulation_of_small_molecule_metabolic_process


id: CL:73
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:73_Structural_constituent_of_ribosome


id: CL:74
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:74_Structural_constituent_of_ribosome


id: CL:744
description: Mixed, incl. Peptidase M16, C-terminal, and AMP-binding enzyme C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:744_Mixed,_incl._Peptidase_M16,_C-terminal,_and_AMP-binding_enzyme_C-terminal_domain


id: CL:760
description: Mixed, incl. Nitroreductase, and SpoU rRNA Methylase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:760_Mixed,_incl._Nitroreductase,_and_SpoU_rRNA_Methylase_family


id: CL:77
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:77_Structural_constituent_of_ribosome


id: CL:771
description: Mixed, incl. Butanoate metabolism, and Rotamase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:771_Mixed,_incl._Butanoate_metabolism,_and_Rotamase


id: CL:772
description: Mixed, incl. Butanoate metabolism, and Peptidase M41
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:772_Mixed,_incl._Butanoate_metabolism,_and_Peptidase_M41


id: CL:773
description: Mixed, incl. Sodium transport, and Single hybrid motif
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:773_Mixed,_incl._Sodium_transport,_and_Single_hybrid_motif


id: CL:789
description: Mixed, incl. Peptidase M41, and PP-loop family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:789_Mixed,_incl._Peptidase_M41,_and_PP-loop_family


id: CL:79
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:79_Structural_constituent_of_ribosome


id: CL:801
description: Mixed, incl. Rotamase, and UvrB, interaction domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:801_Mixed,_incl._Rotamase,_and_UvrB,_interaction_domain


id: CL:810
description: Mixed, incl. Sulfite exporter TauE/SafE, and OBG-type guanine nucleotide-binding (G) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:810_Mixed,_incl._Sulfite_exporter_TauE/SafE,_and_OBG-type_guanine_nucleotide-binding_(G)_domain


id: CL:82
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:82_Structural_constituent_of_ribosome


id: CL:821
description: Mixed, incl. Primosome complex, and DnaJ domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:821_Mixed,_incl._Primosome_complex,_and_DnaJ_domain


id: CL:823
description: Mixed, incl. DnaJ domain, and Phosphodiesterase MJ0936/Vps29
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:823_Mixed,_incl._DnaJ_domain,_and_Phosphodiesterase_MJ0936/Vps29


id: CL:83
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:83_Structural_constituent_of_ribosome


id: CL:835
description: Mixed, incl. DNA strand elongation, and G5 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:835_Mixed,_incl._DNA_strand_elongation,_and_G5_domain


id: CL:84
description: Small ribosomal subunit, and rRNA-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:84_Small_ribosomal_subunit,_and_rRNA-binding


id: CL:844
description: Mixed, incl. Cell division, and Aminoglycan metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:844_Mixed,_incl._Cell_division,_and_Aminoglycan_metabolic_process


id: CL:845
description: Mixed, incl. Cell division, and Aminoglycan metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:845_Mixed,_incl._Cell_division,_and_Aminoglycan_metabolic_process


id: CL:846
description: Mixed, incl. Peptidoglycan biosynthesis, and Peptidoglycan muralytic activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:846_Mixed,_incl._Peptidoglycan_biosynthesis,_and_Peptidoglycan_muralytic_activity


id: CL:847
description: Mixed, incl. Cell shape, and Cell division site
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:847_Mixed,_incl._Cell_shape,_and_Cell_division_site


id: CL:849
description: Cell shape, and Cell division site
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:849_Cell_shape,_and_Cell_division_site


id: CL:851
description: Cell shape, and Cell division site
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:851_Cell_shape,_and_Cell_division_site


id: CL:852
description: Mur ligase, C-terminal, and Cell division site
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:852_Mur_ligase,_C-terminal,_and_Cell_division_site


id: CL:854
description: MurE/MurF, N-terminal, and Vancomycin resistance
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:854_MurE/MurF,_N-terminal,_and_Vancomycin_resistance


id: CL:873
description: UDP-N-acetylgalactosamine metabolic process, and D-Alanine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:873_UDP-N-acetylgalactosamine_metabolic_process,_and_D-Alanine_metabolism


id: CL:897
description: Mixed, incl. Inorganic diphosphatase activity, and Cell cycle protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:897_Mixed,_incl._Inorganic_diphosphatase_activity,_and_Cell_cycle_protein


id: CL:907
description: N-acetylmuramoyl-L-alanine amidase activity, and Serine-type exopeptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:907_N-acetylmuramoyl-L-alanine_amidase_activity,_and_Serine-type_exopeptidase_activity


id: CL:909
description: Cell Wall Hydrolase, and PGBD superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:909_Cell_Wall_Hydrolase,_and_PGBD_superfamily


id: CL:927
description: Serine-type exopeptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:927_Serine-type_exopeptidase_activity


id: CL:938
description: Mixed, incl. Cell morphogenesis, and CDP-alcohol phosphatidyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:938_Mixed,_incl._Cell_morphogenesis,_and_CDP-alcohol_phosphatidyltransferase


id: CL:940
description: Mixed, incl. Regulation of cell cycle, and Actin
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:940_Mixed,_incl._Regulation_of_cell_cycle,_and_Actin


id: CL:943
description: Mixed, incl. Actin, and MPN domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:943_Mixed,_incl._Actin,_and_MPN_domain


id: CL:967
description: CDP-alcohol phosphatidyltransferase, and FtsK domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:967_CDP-alcohol_phosphatidyltransferase,_and_FtsK_domain


id: CL:990
description: Mixed, incl. Aspartyl protease, and Lipid catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121256_STRINGid_CL:990_Mixed,_incl._Aspartyl_protease,_and_Lipid_catabolic_process


id: GO:0000701
description: Purine-specific mismatch base pair DNA N-glycosylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0000701
golevel: 6
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0000701_Purine-specific_mismatch_base_pair_DNA_N-glycosylase_activity


id: GO:0000716
description: Transcription-coupled nucleotide-excision repair, DNA damage recognition
memo: https://amigo.geneontology.org/amigo/term/GO:0000716
golevel: 7
name:
  GOBP.STRING_v12.0_1121256_STRINGid_GO:0000716_Transcription-coupled_nucleotide-excision_repair,_DNA_damage_recognition


id: GO:0000724
description: Double-strand break repair via homologous recombination
memo: https://amigo.geneontology.org/amigo/term/GO:0000724
golevel: 7
name:
  GOBP.STRING_v12.0_1121256_STRINGid_GO:0000724_Double-strand_break_repair_via_homologous_recombination


id: GO:0001073
description: Transcription antitermination factor activity, DNA binding
memo: https://amigo.geneontology.org/amigo/term/GO:0001073
golevel: 2
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0001073_Transcription_antitermination_factor_activity,_DNA_binding


id: GO:0002926
description: tRNA wobble base 5-methoxycarbonylmethyl-2-thiouridinylation
memo: https://amigo.geneontology.org/amigo/term/GO:0002926
golevel: 9
name:
  GOBP.STRING_v12.0_1121256_STRINGid_GO:0002926_tRNA_wobble_base_5-methoxycarbonylmethyl-2-thiouridinylation


id: GO:0003848
description: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003848
golevel: 5
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0003848_2-amino-4-hydroxy-6-hydroxymethyldihydropteridine_diphosphokinase_activity


id: GO:0003906
description: DNA-(apurinic or apyrimidinic site) endonuclease activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003906
golevel: 6
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0003906_DNA-(apurinic_or_apyrimidinic_site)_endonuclease_activity


id: GO:0003908
description: methylated-DNA-[protein]-cysteine S-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003908
golevel: 4
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0003908_methylated-DNA-[protein]-cysteine_S-methyltransferase_activity


id: GO:0003917
description: DNA topoisomerase type I (single strand cut, ATP-independent) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003917
golevel: 5
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0003917_DNA_topoisomerase_type_I_(single_strand_cut,_ATP-independent)_activity


id: GO:0003918
description: DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003918
golevel: 3
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0003918_DNA_topoisomerase_type_II_(double_strand_cut,_ATP-hydrolyzing)_activity


id: GO:0003949
memo: https://amigo.geneontology.org/amigo/term/GO:0003949
golevel: 5
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0003949_1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide_isomerase_activity

description:
  1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity


id: GO:0004015
description: adenosylmethionine-8-amino-7-oxononanoate transaminase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004015
golevel: 5
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0004015_adenosylmethionine-8-amino-7-oxononanoate_transaminase_activity


id: GO:0004018
description: N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004018
golevel: 5
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0004018_N6-(1,2-dicarboxyethyl)AMP_AMP-lyase_(fumarate-forming)_activity


id: GO:0004088
description: Carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004088
golevel: 5
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0004088_Carbamoyl-phosphate_synthase_(glutamine-hydrolyzing)_activity


id: GO:0004317
description: 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004317
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0004317_3-hydroxypalmitoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0004360
description: glutamine-fructose-6-phosphate transaminase (isomerizing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004360
golevel: 6
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0004360_glutamine-fructose-6-phosphate_transaminase_(isomerizing)_activity


id: GO:0004471
description: Malate dehydrogenase (decarboxylating) (NAD+) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004471
golevel: 5
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0004471_Malate_dehydrogenase_(decarboxylating)_(NAD+)_activity


id: GO:0004486
description: Methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004486
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0004486_Methylenetetrahydrofolate_dehydrogenase_[NAD(P)+]_activity


id: GO:0004488
description: Methylenetetrahydrofolate dehydrogenase (NADP+) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004488
golevel: 5
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0004488_Methylenetetrahydrofolate_dehydrogenase_(NADP+)_activity


id: GO:0004489
description: Methylenetetrahydrofolate reductase (NAD(P)H) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004489
golevel: 5
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0004489_Methylenetetrahydrofolate_reductase_(NAD(P)H)_activity


id: GO:0004514
description: Nicotinate-nucleotide diphosphorylase (carboxylating) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004514
golevel: 5
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0004514_Nicotinate-nucleotide_diphosphorylase_(carboxylating)_activity


id: GO:0004616
description: Phosphogluconate dehydrogenase (decarboxylating) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004616
golevel: 5
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0004616_Phosphogluconate_dehydrogenase_(decarboxylating)_activity


id: GO:0004639
description: Phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004639
golevel: 5
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0004639_Phosphoribosylaminoimidazolesuccinocarboxamide_synthase_activity


id: GO:0004641
description: Phosphoribosylformylglycinamidine cyclo-ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004641
golevel: 5
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0004641_Phosphoribosylformylglycinamidine_cyclo-ligase_activity


id: GO:0004643
description: Phosphoribosylaminoimidazolecarboxamide formyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004643
golevel: 5
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0004643_Phosphoribosylaminoimidazolecarboxamide_formyltransferase_activity


id: GO:0004748
description: Ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0004748
golevel: 6
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0004748_Ribonucleoside-diphosphate_reductase_activity,_thioredoxin_disulfide_as_acceptor


id: GO:0005315
description: Inorganic phosphate transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0005315
golevel: 5
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0005315_Inorganic_phosphate_transmembrane_transporter_activity


id: GO:0005350
description: Pyrimidine nucleobase transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0005350
golevel: 4
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0005350_Pyrimidine_nucleobase_transmembrane_transporter_activity


id: GO:0006303
description: Double-strand break repair via nonhomologous end joining
memo: https://amigo.geneontology.org/amigo/term/GO:0006303
golevel: 7
name:
  GOBP.STRING_v12.0_1121256_STRINGid_GO:0006303_Double-strand_break_repair_via_nonhomologous_end_joining


id: GO:0006515
description: Protein quality control for misfolded or incompletely synthesized proteins
memo: https://amigo.geneontology.org/amigo/term/GO:0006515
golevel: 7
name:
  GOBP.STRING_v12.0_1121256_STRINGid_GO:0006515_Protein_quality_control_for_misfolded_or_incompletely_synthesized_proteins


id: GO:0006614
description: SRP-dependent cotranslational protein targeting to membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0006614
golevel: 6
name:
  GOBP.STRING_v12.0_1121256_STRINGid_GO:0006614_SRP-dependent_cotranslational_protein_targeting_to_membrane


id: GO:0007157
description: Heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules
memo: https://amigo.geneontology.org/amigo/term/GO:0007157
golevel: 4
name:
  GOBP.STRING_v12.0_1121256_STRINGid_GO:0007157_Heterophilic_cell-cell_adhesion_via_plasma_membrane_cell_adhesion_molecules


id: GO:0008028
description: Monocarboxylic acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008028
golevel: 4
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0008028_Monocarboxylic_acid_transmembrane_transporter_activity


id: GO:0008108
description: UDP-glucose:hexose-1-phosphate uridylyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008108
golevel: 6
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0008108_UDP-glucose:hexose-1-phosphate_uridylyltransferase_activity


id: GO:0008444
description: CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008444
golevel: 6
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0008444_CDP-diacylglycerol-glycerol-3-phosphate_3-phosphatidyltransferase_activity


id: GO:0008534
description: Oxidized purine nucleobase lesion DNA N-glycosylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008534
golevel: 6
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0008534_Oxidized_purine_nucleobase_lesion_DNA_N-glycosylase_activity


id: GO:0008659
description: (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008659
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0008659_(3R)-hydroxymyristoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0008685
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008685
golevel: 4
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0008685_2-C-methyl-D-erythritol_2,4-cyclodiphosphate_synthase_activity


id: GO:0008686
description: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008686
golevel: 4
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0008686_3,4-dihydroxy-2-butanone-4-phosphate_synthase_activity


id: GO:0008693
description: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008693
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0008693_3-hydroxydecanoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0008703
description: 5-amino-6-(5-phosphoribosylamino)uracil reductase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008703
golevel: 5
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0008703_5-amino-6-(5-phosphoribosylamino)uracil_reductase_activity


id: GO:0008757
description: S-adenosylmethionine-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008757
golevel: 5
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0008757_S-adenosylmethionine-dependent_methyltransferase_activity


id: GO:0008760
description: UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008760
golevel: 4
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0008760_UDP-N-acetylglucosamine_1-carboxyvinyltransferase_activity


id: GO:0008764
description: UDP-N-acetylmuramoylalanine-D-glutamate ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008764
golevel: 5
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0008764_UDP-N-acetylmuramoylalanine-D-glutamate_ligase_activity


id: GO:0008765
description: UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008765
golevel: 5
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0008765_UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate_ligase_activity


id: GO:0008780
description: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008780
golevel: 6
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0008780_acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine_O-acyltransferase_activity


id: GO:0008817
description: cob(I)yrinic acid a,c-diamide adenosyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008817
golevel: 4
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0008817_cob(I)yrinic_acid_a,c-diamide_adenosyltransferase_activity


id: GO:0008835
description: Diaminohydroxyphosphoribosylaminopyrimidine deaminase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008835
golevel: 5
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0008835_Diaminohydroxyphosphoribosylaminopyrimidine_deaminase_activity


id: GO:0008939
description: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008939
golevel: 5
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0008939_Nicotinate-nucleotide-dimethylbenzimidazole_phosphoribosyltransferase_activity


id: GO:0008961
description: Phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008961
golevel: 3
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0008961_Phosphatidylglycerol-prolipoprotein_diacylglyceryl_transferase_activity


id: GO:0008963
description: phospho-N-acetylmuramoyl-pentapeptide-transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008963
golevel: 5
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0008963_phospho-N-acetylmuramoyl-pentapeptide-transferase_activity


id: GO:0008965
description: Phosphoenolpyruvate-protein phosphotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008965
golevel: 5
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0008965_Phosphoenolpyruvate-protein_phosphotransferase_activity


id: GO:0008982
description: protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008982
golevel: 4
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0008982_protein-N(PI)-phosphohistidine-sugar_phosphotransferase_activity


id: GO:0009095
description: Aromatic amino acid family biosynthetic process, prephenate pathway
memo: https://amigo.geneontology.org/amigo/term/GO:0009095
golevel: 7
name:
  GOBP.STRING_v12.0_1121256_STRINGid_GO:0009095_Aromatic_amino_acid_family_biosynthetic_process,_prephenate_pathway


id: GO:0009130
description: Pyrimidine nucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009130
golevel: 7
name:
  GOBP.STRING_v12.0_1121256_STRINGid_GO:0009130_Pyrimidine_nucleoside_monophosphate_biosynthetic_process


id: GO:0009139
description: Pyrimidine nucleoside diphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009139
golevel: 7
name:
  GOBP.STRING_v12.0_1121256_STRINGid_GO:0009139_Pyrimidine_nucleoside_diphosphate_biosynthetic_process


id: GO:0009148
description: Pyrimidine nucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009148
golevel: 7
name:
  GOBP.STRING_v12.0_1121256_STRINGid_GO:0009148_Pyrimidine_nucleoside_triphosphate_biosynthetic_process


id: GO:0009157
description: Deoxyribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009157
golevel: 7
name:
  GOBP.STRING_v12.0_1121256_STRINGid_GO:0009157_Deoxyribonucleoside_monophosphate_biosynthetic_process


id: GO:0009168
description: Purine ribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009168
golevel: 8
name:
  GOBP.STRING_v12.0_1121256_STRINGid_GO:0009168_Purine_ribonucleoside_monophosphate_biosynthetic_process


id: GO:0009173
description: Pyrimidine ribonucleoside monophosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009173
golevel: 8
name:
  GOBP.STRING_v12.0_1121256_STRINGid_GO:0009173_Pyrimidine_ribonucleoside_monophosphate_metabolic_process


id: GO:0009174
description: Pyrimidine ribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009174
golevel: 8
name:
  GOBP.STRING_v12.0_1121256_STRINGid_GO:0009174_Pyrimidine_ribonucleoside_monophosphate_biosynthetic_process


id: GO:0009176
description: Pyrimidine deoxyribonucleoside monophosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009176
golevel: 8
name:
  GOBP.STRING_v12.0_1121256_STRINGid_GO:0009176_Pyrimidine_deoxyribonucleoside_monophosphate_metabolic_process


id: GO:0009177
description: Pyrimidine deoxyribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009177
golevel: 8
name:
  GOBP.STRING_v12.0_1121256_STRINGid_GO:0009177_Pyrimidine_deoxyribonucleoside_monophosphate_biosynthetic_process


id: GO:0009196
description: Pyrimidine deoxyribonucleoside diphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009196
golevel: 8
name:
  GOBP.STRING_v12.0_1121256_STRINGid_GO:0009196_Pyrimidine_deoxyribonucleoside_diphosphate_metabolic_process


id: GO:0009197
description: Pyrimidine deoxyribonucleoside diphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009197
golevel: 8
name:
  GOBP.STRING_v12.0_1121256_STRINGid_GO:0009197_Pyrimidine_deoxyribonucleoside_diphosphate_biosynthetic_process


id: GO:0009206
description: Purine ribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009206
golevel: 8
name:
  GOBP.STRING_v12.0_1121256_STRINGid_GO:0009206_Purine_ribonucleoside_triphosphate_biosynthetic_process


id: GO:0009208
description: Pyrimidine ribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009208
golevel: 8
name:
  GOBP.STRING_v12.0_1121256_STRINGid_GO:0009208_Pyrimidine_ribonucleoside_triphosphate_metabolic_process


id: GO:0009209
description: Pyrimidine ribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009209
golevel: 8
name:
  GOBP.STRING_v12.0_1121256_STRINGid_GO:0009209_Pyrimidine_ribonucleoside_triphosphate_biosynthetic_process


id: GO:0009210
description: Pyrimidine ribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009210
golevel: 8
name:
  GOBP.STRING_v12.0_1121256_STRINGid_GO:0009210_Pyrimidine_ribonucleoside_triphosphate_catabolic_process


id: GO:0009211
description: Pyrimidine deoxyribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009211
golevel: 8
name:
  GOBP.STRING_v12.0_1121256_STRINGid_GO:0009211_Pyrimidine_deoxyribonucleoside_triphosphate_metabolic_process


id: GO:0009212
description: Pyrimidine deoxyribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009212
golevel: 8
name:
  GOBP.STRING_v12.0_1121256_STRINGid_GO:0009212_Pyrimidine_deoxyribonucleoside_triphosphate_biosynthetic_process


id: GO:0009213
description: Pyrimidine deoxyribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009213
golevel: 8
name:
  GOBP.STRING_v12.0_1121256_STRINGid_GO:0009213_Pyrimidine_deoxyribonucleoside_triphosphate_catabolic_process


id: GO:0009215
description: Purine deoxyribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009215
golevel: 8
name:
  GOBP.STRING_v12.0_1121256_STRINGid_GO:0009215_Purine_deoxyribonucleoside_triphosphate_metabolic_process


id: GO:0009217
description: Purine deoxyribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009217
golevel: 8
name:
  GOBP.STRING_v12.0_1121256_STRINGid_GO:0009217_Purine_deoxyribonucleoside_triphosphate_catabolic_process


id: GO:0009401
description: Phosphoenolpyruvate-dependent sugar phosphotransferase system
memo: https://amigo.geneontology.org/amigo/term/GO:0009401
golevel: 5
name:
  GOBP.STRING_v12.0_1121256_STRINGid_GO:0009401_Phosphoenolpyruvate-dependent_sugar_phosphotransferase_system


id: GO:0009678
description: Pyrophosphate hydrolysis-driven proton transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0009678
golevel: 5
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0009678_Pyrophosphate_hydrolysis-driven_proton_transmembrane_transporter_activity


id: GO:0010557
description: Positive regulation of macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010557
golevel: 7
name:
  GOBP.STRING_v12.0_1121256_STRINGid_GO:0010557_Positive_regulation_of_macromolecule_biosynthetic_process


id: GO:0010558
description: Negative regulation of macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010558
golevel: 7
name:
  GOBP.STRING_v12.0_1121256_STRINGid_GO:0010558_Negative_regulation_of_macromolecule_biosynthetic_process


id: GO:0010604
description: Positive regulation of macromolecule metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010604
golevel: 6
name:
  GOBP.STRING_v12.0_1121256_STRINGid_GO:0010604_Positive_regulation_of_macromolecule_metabolic_process


id: GO:0010605
description: Negative regulation of macromolecule metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010605
golevel: 6
name:
  GOBP.STRING_v12.0_1121256_STRINGid_GO:0010605_Negative_regulation_of_macromolecule_metabolic_process


id: GO:0015318
description: Inorganic molecular entity transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015318
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0015318_Inorganic_molecular_entity_transmembrane_transporter_activity


id: GO:0015415
description: ATPase-coupled phosphate ion transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015415
golevel: 3
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0015415_ATPase-coupled_phosphate_ion_transmembrane_transporter_activity


id: GO:0015451
description: Decarboxylation-driven active transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015451
golevel: 5
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0015451_Decarboxylation-driven_active_transmembrane_transporter_activity


id: GO:0015453
description: Oxidoreduction-driven active transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015453
golevel: 5
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0015453_Oxidoreduction-driven_active_transmembrane_transporter_activity


id: GO:0015572
description: N-acetylglucosamine transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015572
golevel: 4
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0015572_N-acetylglucosamine_transmembrane_transporter_activity


id: GO:0015658
description: Branched-chain amino acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015658
golevel: 4
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0015658_Branched-chain_amino_acid_transmembrane_transporter_activity


id: GO:0015667
description: Site-specific DNA-methyltransferase (cytosine-N4-specific) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015667
golevel: 5
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0015667_Site-specific_DNA-methyltransferase_(cytosine-N4-specific)_activity


id: GO:0015975
description: Energy derivation by oxidation of reduced inorganic compounds
memo: https://amigo.geneontology.org/amigo/term/GO:0015975
golevel: 4
name:
  GOBP.STRING_v12.0_1121256_STRINGid_GO:0015975_Energy_derivation_by_oxidation_of_reduced_inorganic_compounds


id: GO:0015988
description: Energy coupled proton transmembrane transport, against electrochemical gradient
memo: https://amigo.geneontology.org/amigo/term/GO:0015988
golevel: 6
name:
  GOBP.STRING_v12.0_1121256_STRINGid_GO:0015988_Energy_coupled_proton_transmembrane_transport,_against_electrochemical_gradient


id: GO:0016614
description: Oxidoreductase activity, acting on CH-OH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016614
golevel: 3
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0016614_Oxidoreductase_activity,_acting_on_CH-OH_group_of_donors


id: GO:0016616
description: Oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016616
golevel: 4
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0016616_Oxidoreductase_activity,_acting_on_the_CH-OH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016620
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016620
golevel: 4
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0016620_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016625
memo: https://amigo.geneontology.org/amigo/term/GO:0016625
golevel: 4
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0016625_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_iron-sulfur_protein_as_acceptor

description:
  Oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor


id: GO:0016627
description: Oxidoreductase activity, acting on the CH-CH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016627
golevel: 3
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0016627_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors


id: GO:0016628
description: Oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016628
golevel: 4
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0016628_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016634
description: Oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016634
golevel: 4
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0016634_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_oxygen_as_acceptor


id: GO:0016635
memo: https://amigo.geneontology.org/amigo/term/GO:0016635
golevel: 4
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0016635_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_quinone_or_related_compound_as_acceptor

description:
  Oxidoreductase activity, acting on the CH-CH group of donors, quinone or related compound as acceptor


id: GO:0016638
description: Oxidoreductase activity, acting on the CH-NH2 group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016638
golevel: 3
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0016638_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors


id: GO:0016639
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016639
golevel: 4
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0016639_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016641
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016641
golevel: 4
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0016641_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_oxygen_as_acceptor


id: GO:0016645
description: Oxidoreductase activity, acting on the CH-NH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016645
golevel: 3
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0016645_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors


id: GO:0016646
description: Oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016646
golevel: 4
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0016646_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016652
description: Oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016652
golevel: 4
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0016652_Oxidoreductase_activity,_acting_on_NAD(P)H,_NAD(P)_as_acceptor


id: GO:0016655
description: Oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016655
golevel: 4
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0016655_Oxidoreductase_activity,_acting_on_NAD(P)H,_quinone_or_similar_compound_as_acceptor


id: GO:0016657
description: Oxidoreductase activity, acting on NAD(P)H, nitrogenous group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016657
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0016657_Oxidoreductase_activity,_acting_on_NAD(P)H,_nitrogenous_group_as_acceptor


id: GO:0016661
description: Oxidoreductase activity, acting on other nitrogenous compounds as donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016661
golevel: 3
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0016661_Oxidoreductase_activity,_acting_on_other_nitrogenous_compounds_as_donors


id: GO:0016667
description: Oxidoreductase activity, acting on a sulfur group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016667
golevel: 3
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0016667_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors


id: GO:0016668
description: Oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016668
golevel: 4
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0016668_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_NAD(P)_as_acceptor


id: GO:0016671
description: Oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016671
golevel: 4
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0016671_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_disulfide_as_acceptor


id: GO:0016684
description: Oxidoreductase activity, acting on peroxide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016684
golevel: 3
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0016684_Oxidoreductase_activity,_acting_on_peroxide_as_acceptor


id: GO:0016699
description: Oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016699
golevel: 4
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0016699_Oxidoreductase_activity,_acting_on_hydrogen_as_donor,_iron-sulfur_protein_as_acceptor


id: GO:0016701
description: Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen
memo: https://amigo.geneontology.org/amigo/term/GO:0016701
golevel: 3
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0016701_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen


id: GO:0016703
memo: https://amigo.geneontology.org/amigo/term/GO:0016703
golevel: 4
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0016703_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen,_incorporation_of_one_atom_of_oxygen_(internal_monooxygenases_or_internal_mixed_function_oxidases)

description:
  Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)


id: GO:0016721
description: Oxidoreductase activity, acting on superoxide radicals as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016721
golevel: 3
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0016721_Oxidoreductase_activity,_acting_on_superoxide_radicals_as_acceptor


id: GO:0016726
description: Oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016726
golevel: 4
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0016726_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_NAD_or_NADP_as_acceptor


id: GO:0016728
description: Oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016728
golevel: 4
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0016728_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_disulfide_as_acceptor


id: GO:0016742
description: Hydroxymethyl-, formyl- and related transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0016742
golevel: 4
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0016742_Hydroxymethyl-,_formyl-_and_related_transferase_activity


id: GO:0016747
description: Acyltransferase activity, transferring groups other than amino-acyl groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016747
golevel: 4
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0016747_Acyltransferase_activity,_transferring_groups_other_than_amino-acyl_groups


id: GO:0016765
description: Transferase activity, transferring alkyl or aryl (other than methyl) groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016765
golevel: 3
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0016765_Transferase_activity,_transferring_alkyl_or_aryl_(other_than_methyl)_groups


id: GO:0016772
description: Transferase activity, transferring phosphorus-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016772
golevel: 3
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0016772_Transferase_activity,_transferring_phosphorus-containing_groups


id: GO:0016773
description: Phosphotransferase activity, alcohol group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016773
golevel: 4
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0016773_Phosphotransferase_activity,_alcohol_group_as_acceptor


id: GO:0016774
description: Phosphotransferase activity, carboxyl group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016774
golevel: 4
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0016774_Phosphotransferase_activity,_carboxyl_group_as_acceptor


id: GO:0016775
description: Phosphotransferase activity, nitrogenous group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016775
golevel: 4
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0016775_Phosphotransferase_activity,_nitrogenous_group_as_acceptor


id: GO:0016776
description: Phosphotransferase activity, phosphate group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016776
golevel: 4
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0016776_Phosphotransferase_activity,_phosphate_group_as_acceptor


id: GO:0016780
description: Phosphotransferase activity, for other substituted phosphate groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016780
golevel: 4
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0016780_Phosphotransferase_activity,_for_other_substituted_phosphate_groups


id: GO:0016782
description: Transferase activity, transferring sulphur-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016782
golevel: 3
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0016782_Transferase_activity,_transferring_sulphur-containing_groups


id: GO:0016796
memo: https://amigo.geneontology.org/amigo/term/GO:0016796
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0016796_Exonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_5-phosphomonoesters

description:
  Exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5-phosphomonoesters


id: GO:0016810
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
memo: https://amigo.geneontology.org/amigo/term/GO:0016810
golevel: 3
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0016810_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds


id: GO:0016811
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
memo: https://amigo.geneontology.org/amigo/term/GO:0016811
golevel: 4
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0016811_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_linear_amides


id: GO:0016812
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
memo: https://amigo.geneontology.org/amigo/term/GO:0016812
golevel: 4
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0016812_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_cyclic_amides


id: GO:0016813
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines
memo: https://amigo.geneontology.org/amigo/term/GO:0016813
golevel: 4
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0016813_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_linear_amidines


id: GO:0016814
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines
memo: https://amigo.geneontology.org/amigo/term/GO:0016814
golevel: 4
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0016814_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_cyclic_amidines


id: GO:0016818
description: Hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
memo: https://amigo.geneontology.org/amigo/term/GO:0016818
golevel: 4
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0016818_Hydrolase_activity,_acting_on_acid_anhydrides,_in_phosphorus-containing_anhydrides


id: GO:0016837
description: Carbon-oxygen lyase activity, acting on polysaccharides
memo: https://amigo.geneontology.org/amigo/term/GO:0016837
golevel: 4
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0016837_Carbon-oxygen_lyase_activity,_acting_on_polysaccharides


id: GO:0016855
description: Racemase and epimerase activity, acting on amino acids and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0016855
golevel: 4
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0016855_Racemase_and_epimerase_activity,_acting_on_amino_acids_and_derivatives


id: GO:0016857
description: Racemase and epimerase activity, acting on carbohydrates and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0016857
golevel: 4
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0016857_Racemase_and_epimerase_activity,_acting_on_carbohydrates_and_derivatives


id: GO:0016861
description: Intramolecular oxidoreductase activity, interconverting aldoses and ketoses
memo: https://amigo.geneontology.org/amigo/term/GO:0016861
golevel: 4
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0016861_Intramolecular_oxidoreductase_activity,_interconverting_aldoses_and_ketoses


id: GO:0016867
description: Intramolecular transferase activity, transferring acyl groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016867
golevel: 4
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0016867_Intramolecular_transferase_activity,_transferring_acyl_groups


id: GO:0016868
description: Intramolecular transferase activity, phosphotransferases
memo: https://amigo.geneontology.org/amigo/term/GO:0016868
golevel: 4
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0016868_Intramolecular_transferase_activity,_phosphotransferases


id: GO:0016869
description: Intramolecular transferase activity, transferring amino groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016869
golevel: 4
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0016869_Intramolecular_transferase_activity,_transferring_amino_groups


id: GO:0016884
description: Carbon-nitrogen ligase activity, with glutamine as amido-N-donor
memo: https://amigo.geneontology.org/amigo/term/GO:0016884
golevel: 4
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0016884_Carbon-nitrogen_ligase_activity,_with_glutamine_as_amido-N-donor


id: GO:0016889
description: Endodeoxyribonuclease activity, producing 3-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016889
golevel: 4
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0016889_Endodeoxyribonuclease_activity,_producing_3-phosphomonoesters


id: GO:0016891
description: Endoribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016891
golevel: 4
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0016891_Endoribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016892
description: Endoribonuclease activity, producing 3-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016892
golevel: 4
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0016892_Endoribonuclease_activity,_producing_3-phosphomonoesters


id: GO:0016893
memo: https://amigo.geneontology.org/amigo/term/GO:0016893
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0016893_Endonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_5-phosphomonoesters

description:
  Endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5-phosphomonoesters


id: GO:0016894
memo: https://amigo.geneontology.org/amigo/term/GO:0016894
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0016894_Endonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_3-phosphomonoesters

description:
  Endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3-phosphomonoesters


id: GO:0016895
description: Exodeoxyribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016895
golevel: 6
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0016895_Exodeoxyribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016896
description: Exoribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016896
golevel: 6
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0016896_Exoribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016901
memo: https://amigo.geneontology.org/amigo/term/GO:0016901
golevel: 4
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0016901_Oxidoreductase_activity,_acting_on_the_CH-OH_group_of_donors,_quinone_or_similar_compound_as_acceptor

description:
  Oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor


id: GO:0016903
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016903
golevel: 3
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0016903_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors


id: GO:0018339
description: peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid
memo: https://amigo.geneontology.org/amigo/term/GO:0018339
golevel: 8
name:
  GOBP.STRING_v12.0_1121256_STRINGid_GO:0018339_peptidyl-L-beta-methylthioaspartic_acid_biosynthetic_process_from_peptidyl-aspartic_acid


id: GO:0019171
description: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0019171
golevel: 5
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0019171_3-hydroxyacyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0019219
description: Regulation of nucleobase-containing compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0019219
golevel: 6
name:
  GOBP.STRING_v12.0_1121256_STRINGid_GO:0019219_Regulation_of_nucleobase-containing_compound_metabolic_process


id: GO:0019288
description: Isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
memo: https://amigo.geneontology.org/amigo/term/GO:0019288
golevel: 5
name:
  GOBP.STRING_v12.0_1121256_STRINGid_GO:0019288_Isopentenyl_diphosphate_biosynthetic_process,_methylerythritol_4-phosphate_pathway


id: GO:0019556
description: Histidine catabolic process to glutamate and formamide
memo: https://amigo.geneontology.org/amigo/term/GO:0019556
golevel: 5
name:
  GOBP.STRING_v12.0_1121256_STRINGid_GO:0019556_Histidine_catabolic_process_to_glutamate_and_formamide


id: GO:0019829
description: ATPase-coupled cation transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0019829
golevel: 3
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0019829_ATPase-coupled_cation_transmembrane_transporter_activity


id: GO:0030435
description: Sporulation resulting in formation of a cellular spore
memo: https://amigo.geneontology.org/amigo/term/GO:0030435
golevel: 3
name:
  GOBP.STRING_v12.0_1121256_STRINGid_GO:0030435_Sporulation_resulting_in_formation_of_a_cellular_spore


id: GO:0030604
description: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0030604
golevel: 5
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0030604_1-deoxy-D-xylulose-5-phosphate_reductoisomerase_activity


id: GO:0030698
description: 5,10-methylenetetrahydrofolate-dependent tRNA (m5U54) methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0030698
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0030698_5,10-methylenetetrahydrofolate-dependent_tRNA_(m5U54)_methyltransferase_activity


id: GO:0031234
description: Extrinsic component of cytoplasmic side of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031234
golevel: 4
name:
  GOCC.STRING_v12.0_1121256_STRINGid_GO:0031234_Extrinsic_component_of_cytoplasmic_side_of_plasma_membrane


id: GO:0031250
description: Anaerobic ribonucleoside-triphosphate reductase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0031250
golevel: 3
name:
  GOCC.STRING_v12.0_1121256_STRINGid_GO:0031250_Anaerobic_ribonucleoside-triphosphate_reductase_complex


id: GO:0031554
description: Regulation of DNA-templated transcription, termination
memo: https://amigo.geneontology.org/amigo/term/GO:0031554
golevel: 6
name:
  GOBP.STRING_v12.0_1121256_STRINGid_GO:0031554_Regulation_of_DNA-templated_transcription,_termination


id: GO:0032105
description: Negative regulation of response to extracellular stimulus
memo: https://amigo.geneontology.org/amigo/term/GO:0032105
name:
  GOBP.STRING_v12.0_1121256_STRINGid_GO:0032105_Negative_regulation_of_response_to_extracellular_stimulus


id: GO:0033177
description: Proton-transporting two-sector ATPase complex, proton-transporting domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033177
golevel: 3
name:
  GOCC.STRING_v12.0_1121256_STRINGid_GO:0033177_Proton-transporting_two-sector_ATPase_complex,_proton-transporting_domain


id: GO:0033178
description: Proton-transporting two-sector ATPase complex, catalytic domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033178
golevel: 3
name:
  GOCC.STRING_v12.0_1121256_STRINGid_GO:0033178_Proton-transporting_two-sector_ATPase_complex,_catalytic_domain


id: GO:0033283
description: ATPase-coupled organic acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033283
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0033283_ATPase-coupled_organic_acid_transmembrane_transporter_activity


id: GO:0033284
description: ATPase-coupled carboxylic acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033284
golevel: 3
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0033284_ATPase-coupled_carboxylic_acid_transmembrane_transporter_activity


id: GO:0034023
description: 5-(carboxyamino)imidazole ribonucleotide mutase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0034023
golevel: 4
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0034023_5-(carboxyamino)imidazole_ribonucleotide_mutase_activity


id: GO:0034036
description: Purine ribonucleoside bisphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034036
golevel: 6
name:
  GOBP.STRING_v12.0_1121256_STRINGid_GO:0034036_Purine_ribonucleoside_bisphosphate_biosynthetic_process


id: GO:0034249
description: Negative regulation of cellular amide metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034249
golevel: 6
name:
  GOBP.STRING_v12.0_1121256_STRINGid_GO:0034249_Negative_regulation_of_cellular_amide_metabolic_process


id: GO:0034250
description: Positive regulation of cellular amide metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034250
golevel: 6
name:
  GOBP.STRING_v12.0_1121256_STRINGid_GO:0034250_Positive_regulation_of_cellular_amide_metabolic_process


id: GO:0034404
description: Nucleobase-containing small molecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034404
golevel: 5
name:
  GOBP.STRING_v12.0_1121256_STRINGid_GO:0034404_Nucleobase-containing_small_molecule_biosynthetic_process


id: GO:0034656
description: Nucleobase-containing small molecule catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034656
golevel: 5
name:
  GOBP.STRING_v12.0_1121256_STRINGid_GO:0034656_Nucleobase-containing_small_molecule_catabolic_process


id: GO:0035592
description: Establishment of protein localization to extracellular region
memo: https://amigo.geneontology.org/amigo/term/GO:0035592
golevel: 4
name:
  GOBP.STRING_v12.0_1121256_STRINGid_GO:0035592_Establishment_of_protein_localization_to_extracellular_region


id: GO:0035598
description: N6-threonylcarbomyladenosine methylthiotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0035598
golevel: 5
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0035598_N6-threonylcarbomyladenosine_methylthiotransferase_activity


id: GO:0035998
description: 7,8-dihydroneopterin 3-triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0035998
name:
  GOBP.STRING_v12.0_1121256_STRINGid_GO:0035998_7,8-dihydroneopterin_3-triphosphate_biosynthetic_process


id: GO:0036361
description: Racemase activity, acting on amino acids and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0036361
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0036361_Racemase_activity,_acting_on_amino_acids_and_derivatives


id: GO:0036381
description: Pyridoxal 5-phosphate synthase (glutamine hydrolysing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0036381
golevel: 5
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0036381_Pyridoxal_5-phosphate_synthase_(glutamine_hydrolysing)_activity


id: GO:0042083
description: 5,10-methylenetetrahydrofolate-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0042083
golevel: 5
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0042083_5,10-methylenetetrahydrofolate-dependent_methyltransferase_activity


id: GO:0042084
description: 5-methyltetrahydrofolate-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0042084
golevel: 5
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0042084_5-methyltetrahydrofolate-dependent_methyltransferase_activity


id: GO:0042173
description: Regulation of sporulation resulting in formation of a cellular spore
memo: https://amigo.geneontology.org/amigo/term/GO:0042173
golevel: 5
name:
  GOBP.STRING_v12.0_1121256_STRINGid_GO:0042173_Regulation_of_sporulation_resulting_in_formation_of_a_cellular_spore


id: GO:0042174
description: Negative regulation of sporulation resulting in formation of a cellular spore
memo: https://amigo.geneontology.org/amigo/term/GO:0042174
golevel: 6
name:
  GOBP.STRING_v12.0_1121256_STRINGid_GO:0042174_Negative_regulation_of_sporulation_resulting_in_formation_of_a_cellular_spore


id: GO:0042777
description: Proton motive force-driven plasma membrane ATP synthesis
memo: https://amigo.geneontology.org/amigo/term/GO:0042777
golevel: 9
name:
  GOBP.STRING_v12.0_1121256_STRINGid_GO:0042777_Proton_motive_force-driven_plasma_membrane_ATP_synthesis


id: GO:0043225
description: ATPase-coupled inorganic anion transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0043225
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0043225_ATPase-coupled_inorganic_anion_transmembrane_transporter_activity


id: GO:0043242
description: Negative regulation of protein-containing complex disassembly
memo: https://amigo.geneontology.org/amigo/term/GO:0043242
golevel: 6
name:
  GOBP.STRING_v12.0_1121256_STRINGid_GO:0043242_Negative_regulation_of_protein-containing_complex_disassembly


id: GO:0043772
description: Acyl-phosphate glycerol-3-phosphate acyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0043772
golevel: 5
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0043772_Acyl-phosphate_glycerol-3-phosphate_acyltransferase_activity


id: GO:0043811
description: Phosphate:acyl-[acyl carrier protein] acyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0043811
golevel: 5
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0043811_Phosphate:acyl-[acyl_carrier_protein]_acyltransferase_activity


id: GO:0044419
description: Biological process involved in interspecies interaction between organisms
memo: https://amigo.geneontology.org/amigo/term/GO:0044419
golevel: 1
name:
  GOBP.STRING_v12.0_1121256_STRINGid_GO:0044419_Biological_process_involved_in_interspecies_interaction_between_organisms


id: GO:0044769
description: ATPase activity, coupled to transmembrane movement of ions, rotational mechanism
memo: https://amigo.geneontology.org/amigo/term/GO:0044769
golevel: 4
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0044769_ATPase_activity,_coupled_to_transmembrane_movement_of_ions,_rotational_mechanism


id: GO:0045156
memo: https://amigo.geneontology.org/amigo/term/GO:0045156
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0045156_Electron_transporter,_transferring_electrons_within_the_cyclic_electron_transport_pathway_of_photosynthesis_activity

description:
  Electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity


id: GO:0045261
description: Proton-transporting ATP synthase complex, catalytic core F(1)
memo: https://amigo.geneontology.org/amigo/term/GO:0045261
name:
  GOCC.STRING_v12.0_1121256_STRINGid_GO:0045261_Proton-transporting_ATP_synthase_complex,_catalytic_core_F(1)


id: GO:0045263
description: Proton-transporting ATP synthase complex, coupling factor F(o)
memo: https://amigo.geneontology.org/amigo/term/GO:0045263
name:
  GOCC.STRING_v12.0_1121256_STRINGid_GO:0045263_Proton-transporting_ATP_synthase_complex,_coupling_factor_F(o)


id: GO:0045304
description: Regulation of establishment of competence for transformation
memo: https://amigo.geneontology.org/amigo/term/GO:0045304
golevel: 4
name:
  GOBP.STRING_v12.0_1121256_STRINGid_GO:0045304_Regulation_of_establishment_of_competence_for_transformation


id: GO:0045717
description: Negative regulation of fatty acid biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0045717
golevel: 8
name:
  GOBP.STRING_v12.0_1121256_STRINGid_GO:0045717_Negative_regulation_of_fatty_acid_biosynthetic_process


id: GO:0045881
description: Positive regulation of sporulation resulting in formation of a cellular spore
memo: https://amigo.geneontology.org/amigo/term/GO:0045881
golevel: 6
name:
  GOBP.STRING_v12.0_1121256_STRINGid_GO:0045881_Positive_regulation_of_sporulation_resulting_in_formation_of_a_cellular_spore


id: GO:0045934
description: Negative regulation of nucleobase-containing compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0045934
golevel: 6
name:
  GOBP.STRING_v12.0_1121256_STRINGid_GO:0045934_Negative_regulation_of_nucleobase-containing_compound_metabolic_process


id: GO:0045935
description: Positive regulation of nucleobase-containing compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0045935
name:
  GOBP.STRING_v12.0_1121256_STRINGid_GO:0045935_Positive_regulation_of_nucleobase-containing_compound_metabolic_process


id: GO:0046429
description: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0046429
golevel: 5
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0046429_4-hydroxy-3-methylbut-2-en-1-yl_diphosphate_synthase_activity


id: GO:0046537
description: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0046537
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0046537_2,3-bisphosphoglycerate-independent_phosphoglycerate_mutase_activity


id: GO:0046857
memo: https://amigo.geneontology.org/amigo/term/GO:0046857
golevel: 4
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0046857_Oxidoreductase_activity,_acting_on_other_nitrogenous_compounds_as_donors,_with_NAD_or_NADP_as_acceptor

description:
  Oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor


id: GO:0046912
description: Acyltransferase activity, acyl groups converted into alkyl on transfer
memo: https://amigo.geneontology.org/amigo/term/GO:0046912
golevel: 4
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0046912_Acyltransferase_activity,_acyl_groups_converted_into_alkyl_on_transfer


id: GO:0046915
description: Transition metal ion transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0046915
golevel: 6
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0046915_Transition_metal_ion_transmembrane_transporter_activity


id: GO:0046933
description: Proton-transporting ATP synthase activity, rotational mechanism
memo: https://amigo.geneontology.org/amigo/term/GO:0046933
golevel: 3
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0046933_Proton-transporting_ATP_synthase_activity,_rotational_mechanism


id: GO:0046961
description: Proton-transporting ATPase activity, rotational mechanism
memo: https://amigo.geneontology.org/amigo/term/GO:0046961
golevel: 4
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0046961_Proton-transporting_ATPase_activity,_rotational_mechanism


id: GO:0046992
description: Oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond
memo: https://amigo.geneontology.org/amigo/term/GO:0046992
golevel: 3
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0046992_Oxidoreductase_activity,_acting_on_X-H_and_Y-H_to_form_an_X-Y_bond


id: GO:0047151
description: methylenetetrahydrofolate-tRNA-(uracil-5-)-methyltransferase (FADH2-oxidizing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0047151
golevel: 7
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0047151_methylenetetrahydrofolate-tRNA-(uracil-5-)-methyltransferase_(FADH2-oxidizing)_activity


id: GO:0047324
description: Phosphoenolpyruvate-glycerone phosphotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0047324
golevel: 5
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0047324_Phosphoenolpyruvate-glycerone_phosphotransferase_activity


id: GO:0047334
description: diphosphate-fructose-6-phosphate 1-phosphotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0047334
golevel: 6
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0047334_diphosphate-fructose-6-phosphate_1-phosphotransferase_activity


id: GO:0047451
description: 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0047451
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0047451_3-hydroxyoctanoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0048646
description: Anatomical structure formation involved in morphogenesis
memo: https://amigo.geneontology.org/amigo/term/GO:0048646
golevel: 2
name:
  GOBP.STRING_v12.0_1121256_STRINGid_GO:0048646_Anatomical_structure_formation_involved_in_morphogenesis


id: GO:0050511
description: Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050511
golevel: 6
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0050511_Undecaprenyldiphospho-muramoylpentapeptide_beta-N-acetylglucosaminyltransferase_activity


id: GO:0050515
description: 4-(cytidine 5-diphospho)-2-C-methyl-D-erythritol kinase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050515
golevel: 5
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0050515_4-(cytidine_5-diphospho)-2-C-methyl-D-erythritol_kinase_activity


id: GO:0050518
description: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050518
golevel: 6
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0050518_2-C-methyl-D-erythritol_4-phosphate_cytidylyltransferase_activity


id: GO:0050566
description: asparaginyl-tRNA synthase (glutamine-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050566
golevel: 5
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0050566_asparaginyl-tRNA_synthase_(glutamine-hydrolyzing)_activity


id: GO:0050567
description: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050567
golevel: 5
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0050567_glutaminyl-tRNA_synthase_(glutamine-hydrolyzing)_activity


id: GO:0051003
description: Ligase activity, forming nitrogen-metal bonds, forming coordination complexes
memo: https://amigo.geneontology.org/amigo/term/GO:0051003
golevel: 4
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0051003_Ligase_activity,_forming_nitrogen-metal_bonds,_forming_coordination_complexes


id: GO:0051075
description: S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0051075
golevel: 3
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0051075_S-adenosylmethionine:tRNA_ribosyltransferase-isomerase_activity


id: GO:0051129
description: Negative regulation of cellular component organization
memo: https://amigo.geneontology.org/amigo/term/GO:0051129
golevel: 5
name:
  GOBP.STRING_v12.0_1121256_STRINGid_GO:0051129_Negative_regulation_of_cellular_component_organization


id: GO:0051130
description: Positive regulation of cellular component organization
memo: https://amigo.geneontology.org/amigo/term/GO:0051130
golevel: 5
name:
  GOBP.STRING_v12.0_1121256_STRINGid_GO:0051130_Positive_regulation_of_cellular_component_organization


id: GO:0051172
description: Negative regulation of nitrogen compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0051172
name:
  GOBP.STRING_v12.0_1121256_STRINGid_GO:0051172_Negative_regulation_of_nitrogen_compound_metabolic_process


id: GO:0051173
description: Positive regulation of nitrogen compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0051173
name:
  GOBP.STRING_v12.0_1121256_STRINGid_GO:0051173_Positive_regulation_of_nitrogen_compound_metabolic_process


id: GO:0051240
description: Positive regulation of multicellular organismal process
memo: https://amigo.geneontology.org/amigo/term/GO:0051240
golevel: 4
name:
  GOBP.STRING_v12.0_1121256_STRINGid_GO:0051240_Positive_regulation_of_multicellular_organismal_process


id: GO:0051745
description: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0051745
golevel: 5
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0051745_4-hydroxy-3-methylbut-2-en-1-yl_diphosphate_reductase_activity


id: GO:0051748
description: UTP-monosaccharide-1-phosphate uridylyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0051748
golevel: 6
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0051748_UTP-monosaccharide-1-phosphate_uridylyltransferase_activity


id: GO:0051991
memo: https://amigo.geneontology.org/amigo/term/GO:0051991
golevel: 6
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0051991_UDP-N-acetyl-D-glucosamine:N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenol_4-beta-N-acetylglucosaminlytransferase_activity

description:
  UDP-N-acetyl-D-glucosamine:N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenol 4-beta-N-acetylglucosaminlytransferase activity


id: GO:0051992
memo: https://amigo.geneontology.org/amigo/term/GO:0051992
golevel: 5
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0051992_UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine:undecaprenyl-phosphate_transferase_activity

description:
  UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine:undecaprenyl-phosphate transferase activity


id: GO:0052592
description: Oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0052592
golevel: 4
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0052592_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_with_an_iron-sulfur_protein_as_acceptor


id: GO:0052890
description: Oxidoreductase activity, acting on the CH-CH group of donors, with a flavin as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0052890
golevel: 4
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0052890_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_with_a_flavin_as_acceptor


id: GO:0052908
description: 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0052908
golevel: 7
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0052908_16S_rRNA_(adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase_activity


id: GO:0055052
description: ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing
memo: https://amigo.geneontology.org/amigo/term/GO:0055052
golevel: 5
name:
  GOCC.STRING_v12.0_1121256_STRINGid_GO:0055052_ATP-binding_cassette_(ABC)_transporter_complex,_substrate-binding_subunit-containing


id: GO:0055086
description: Nucleobase-containing small molecule metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0055086
golevel: 4
name:
  GOBP.STRING_v12.0_1121256_STRINGid_GO:0055086_Nucleobase-containing_small_molecule_metabolic_process


id: GO:0060567
description: Negative regulation of DNA-templated transcription, termination
memo: https://amigo.geneontology.org/amigo/term/GO:0060567
golevel: 7
name:
  GOBP.STRING_v12.0_1121256_STRINGid_GO:0060567_Negative_regulation_of_DNA-templated_transcription,_termination


id: GO:0061504
description: Cyclic threonylcarbamoyladenosine biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0061504
golevel: 7
name:
  GOBP.STRING_v12.0_1121256_STRINGid_GO:0061504_Cyclic_threonylcarbamoyladenosine_biosynthetic_process


id: GO:0061695
description: Transferase complex, transferring phosphorus-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0061695
golevel: 4
name:
  GOCC.STRING_v12.0_1121256_STRINGid_GO:0061695_Transferase_complex,_transferring_phosphorus-containing_groups


id: GO:0062014
description: Negative regulation of small molecule metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0062014
golevel: 6
name:
  GOBP.STRING_v12.0_1121256_STRINGid_GO:0062014_Negative_regulation_of_small_molecule_metabolic_process


id: GO:0070626
memo: https://amigo.geneontology.org/amigo/term/GO:0070626
golevel: 5
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0070626_(S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)_succinate_lyase_(fumarate-forming)_activity

description:
  (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido) succinate lyase (fumarate-forming) activity


id: GO:0070647
description: Protein modification by small protein conjugation or removal
memo: https://amigo.geneontology.org/amigo/term/GO:0070647
golevel: 7
name:
  GOBP.STRING_v12.0_1121256_STRINGid_GO:0070647_Protein_modification_by_small_protein_conjugation_or_removal


id: GO:0071951
description: Conversion of methionyl-tRNA to N-formyl-methionyl-tRNA
memo: https://amigo.geneontology.org/amigo/term/GO:0071951
golevel: 8
name:
  GOBP.STRING_v12.0_1121256_STRINGid_GO:0071951_Conversion_of_methionyl-tRNA_to_N-formyl-methionyl-tRNA


id: GO:0072531
description: Pyrimidine-containing compound transmembrane transport
memo: https://amigo.geneontology.org/amigo/term/GO:0072531
golevel: 3
name:
  GOBP.STRING_v12.0_1121256_STRINGid_GO:0072531_Pyrimidine-containing_compound_transmembrane_transport


id: GO:0072599
description: Establishment of protein localization to endoplasmic reticulum
memo: https://amigo.geneontology.org/amigo/term/GO:0072599
golevel: 5
name:
  GOBP.STRING_v12.0_1121256_STRINGid_GO:0072599_Establishment_of_protein_localization_to_endoplasmic_reticulum


id: GO:0097588
description: Archaeal or bacterial-type flagellum-dependent cell motility
memo: https://amigo.geneontology.org/amigo/term/GO:0097588
golevel: 4
name:
  GOBP.STRING_v12.0_1121256_STRINGid_GO:0097588_Archaeal_or_bacterial-type_flagellum-dependent_cell_motility


id: GO:0098742
description: Cell-cell adhesion via plasma-membrane adhesion molecules
memo: https://amigo.geneontology.org/amigo/term/GO:0098742
name:
  GOBP.STRING_v12.0_1121256_STRINGid_GO:0098742_Cell-cell_adhesion_via_plasma-membrane_adhesion_molecules


id: GO:0102552
description: Lipoyl synthase activity (acting on glycine-cleavage complex H protein
memo: https://amigo.geneontology.org/amigo/term/GO:0102552
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0102552_Lipoyl_synthase_activity_(acting_on_glycine-cleavage_complex_H_protein


id: GO:0102553
description: Lipoyl synthase activity (acting on pyruvate dehydrogenase E2 protein)
memo: https://amigo.geneontology.org/amigo/term/GO:0102553
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0102553_Lipoyl_synthase_activity_(acting_on_pyruvate_dehydrogenase_E2_protein)


id: GO:0106074
description: aminoacyl-tRNA metabolism involved in translational fidelity
memo: https://amigo.geneontology.org/amigo/term/GO:0106074
golevel: 4
name:
  GOBP.STRING_v12.0_1121256_STRINGid_GO:0106074_aminoacyl-tRNA_metabolism_involved_in_translational_fidelity


id: GO:0140078
description: Class I DNA-(apurinic or apyrimidinic site) endonuclease activity
memo: https://amigo.geneontology.org/amigo/term/GO:0140078
golevel: 4
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:0140078_Class_I_DNA-(apurinic_or_apyrimidinic_site)_endonuclease_activity


id: GO:1900191
description: Negative regulation of single-species biofilm formation
memo: https://amigo.geneontology.org/amigo/term/GO:1900191
golevel: 5
name:
  GOBP.STRING_v12.0_1121256_STRINGid_GO:1900191_Negative_regulation_of_single-species_biofilm_formation


id: GO:1900231
description: Regulation of single-species biofilm formation on inanimate substrate
memo: https://amigo.geneontology.org/amigo/term/GO:1900231
golevel: 5
name:
  GOBP.STRING_v12.0_1121256_STRINGid_GO:1900231_Regulation_of_single-species_biofilm_formation_on_inanimate_substrate


id: GO:1901505
description: Carbohydrate derivative transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:1901505
golevel: 3
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:1901505_Carbohydrate_derivative_transmembrane_transporter_activity


id: GO:1901618
description: Organic hydroxy compound transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:1901618
name:
  GOMF.STRING_v12.0_1121256_STRINGid_GO:1901618_Organic_hydroxy_compound_transmembrane_transporter_activity


id: GO:1901800
description: Positive regulation of proteasomal protein catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:1901800
golevel: 8
name:
  GOBP.STRING_v12.0_1121256_STRINGid_GO:1901800_Positive_regulation_of_proteasomal_protein_catabolic_process


id: GO:1902021
description: Regulation of bacterial-type flagellum-dependent cell motility
memo: https://amigo.geneontology.org/amigo/term/GO:1902021
golevel: 5
name:
  GOBP.STRING_v12.0_1121256_STRINGid_GO:1902021_Regulation_of_bacterial-type_flagellum-dependent_cell_motility


id: GO:1902221
description: Erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:1902221
name:
  GOBP.STRING_v12.0_1121256_STRINGid_GO:1902221_Erythrose_4-phosphate/phosphoenolpyruvate_family_amino_acid_metabolic_process


id: GO:1902223
description: Erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:1902223
name:
  GOBP.STRING_v12.0_1121256_STRINGid_GO:1902223_Erythrose_4-phosphate/phosphoenolpyruvate_family_amino_acid_biosynthetic_process


id: GO:1903050
description: Regulation of proteolysis involved in protein catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:1903050
golevel: 8
name:
  GOBP.STRING_v12.0_1121256_STRINGid_GO:1903050_Regulation_of_proteolysis_involved_in_protein_catabolic_process


id: GO:1903052
description: Positive regulation of proteolysis involved in protein catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:1903052
golevel: 9
name:
  GOBP.STRING_v12.0_1121256_STRINGid_GO:1903052_Positive_regulation_of_proteolysis_involved_in_protein_catabolic_process


id: GO:1903507
description: Negative regulation of nucleic acid-templated transcription
memo: https://amigo.geneontology.org/amigo/term/GO:1903507
name:
  GOBP.STRING_v12.0_1121256_STRINGid_GO:1903507_Negative_regulation_of_nucleic_acid-templated_transcription


id: GO:1903508
description: Positive regulation of nucleic acid-templated transcription
memo: https://amigo.geneontology.org/amigo/term/GO:1903508
name:
  GOBP.STRING_v12.0_1121256_STRINGid_GO:1903508_Positive_regulation_of_nucleic_acid-templated_transcription


id: GO:1990961
description: Xenobiotic detoxification by transmembrane export across the plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:1990961
golevel: 4
name:
  GOBP.STRING_v12.0_1121256_STRINGid_GO:1990961_Xenobiotic_detoxification_by_transmembrane_export_across_the_plasma_membrane


id: GO:2000112
description: Regulation of cellular macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:2000112
name:
  GOBP.STRING_v12.0_1121256_STRINGid_GO:2000112_Regulation_of_cellular_macromolecule_biosynthetic_process


id: GO:2000113
description: Negative regulation of cellular macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:2000113
name:
  GOBP.STRING_v12.0_1121256_STRINGid_GO:2000113_Negative_regulation_of_cellular_macromolecule_biosynthetic_process


id: GOCC:0000015
description: Phosphopyruvate hydratase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000015
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1121256_STRINGid_GOCC:0000015_Phosphopyruvate_hydratase_complex


id: GOCC:0000159
description: Protein phosphatase type 2A complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000159
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1121256_STRINGid_GOCC:0000159_Protein_phosphatase_type_2A_complex


id: GOCC:0000172
description: Ribonuclease MRP complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000172
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1121256_STRINGid_GOCC:0000172_Ribonuclease_MRP_complex


id: GOCC:0000178
description: Exosome (RNase complex)
memo: https://amigo.geneontology.org/amigo/term/GO:0000178
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1121256_STRINGid_GOCC:0000178_Exosome_(RNase_complex)


id: GOCC:0000221
description: Vacuolar proton-transporting V-type ATPase, V1 domain
memo: https://amigo.geneontology.org/amigo/term/GO:0000221
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1121256_STRINGid_GOCC:0000221_Vacuolar_proton-transporting_V-type_ATPase,_V1_domain


id: GOCC:0000325
description: Plant-type vacuole
memo: https://amigo.geneontology.org/amigo/term/GO:0000325
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1121256_STRINGid_GOCC:0000325_Plant-type_vacuole


id: GOCC:0000408
description: EKC/KEOPS complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000408
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1121256_STRINGid_GOCC:0000408_EKC/KEOPS_complex


id: GOCC:0000428
description: DNA-directed RNA polymerase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000428
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1121256_STRINGid_GOCC:0000428_DNA-directed_RNA_polymerase_complex


id: GOCC:0000502
description: Proteasome complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000502
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1121256_STRINGid_GOCC:0000502_Proteasome_complex


id: GOCC:0000775
description: Chromosome, centromeric region
memo: https://amigo.geneontology.org/amigo/term/GO:0000775
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1121256_STRINGid_GOCC:0000775_Chromosome,_centromeric_region


id: GOCC:0000779
description: Condensed chromosome, centromeric region
memo: https://amigo.geneontology.org/amigo/term/GO:0000779
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1121256_STRINGid_GOCC:0000779_Condensed_chromosome,_centromeric_region


id: GOCC:0000781
description: Chromosome, telomeric region
memo: https://amigo.geneontology.org/amigo/term/GO:0000781
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1121256_STRINGid_GOCC:0000781_Chromosome,_telomeric_region


id: GOCC:0000793
description: Condensed chromosome
memo: https://amigo.geneontology.org/amigo/term/GO:0000793
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1121256_STRINGid_GOCC:0000793_Condensed_chromosome


id: GOCC:0000930
description: Gamma-tubulin complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000930
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1121256_STRINGid_GOCC:0000930_Gamma-tubulin_complex


id: GOCC:0000931
description: Gamma-tubulin large complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000931
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1121256_STRINGid_GOCC:0000931_Gamma-tubulin_large_complex


id: GOCC:0002189
description: Ribose phosphate diphosphokinase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0002189
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1121256_STRINGid_GOCC:0002189_Ribose_phosphate_diphosphokinase_complex


id: GOCC:0005576
description: Extracellular region
memo: https://amigo.geneontology.org/amigo/term/GO:0005576
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1121256_STRINGid_GOCC:0005576_Extracellular_region


id: GOCC:0005604
description: Basement membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0005604
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1121256_STRINGid_GOCC:0005604_Basement_membrane


id: GOCC:0005615
description: Extracellular space
memo: https://amigo.geneontology.org/amigo/term/GO:0005615
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1121256_STRINGid_GOCC:0005615_Extracellular_space


id: GOCC:0005727
description: Extrachromosomal circular DNA
memo: https://amigo.geneontology.org/amigo/term/GO:0005727
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1121256_STRINGid_GOCC:0005727_Extrachromosomal_circular_DNA


id: GOCC:0005732
description: Small nucleolar ribonucleoprotein complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005732
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1121256_STRINGid_GOCC:0005732_Small_nucleolar_ribonucleoprotein_complex


id: GOCC:0005740
description: Mitochondrial envelope
memo: https://amigo.geneontology.org/amigo/term/GO:0005740
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1121256_STRINGid_GOCC:0005740_Mitochondrial_envelope


id: GOCC:0005743
description: Mitochondrial inner membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0005743
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1121256_STRINGid_GOCC:0005743_Mitochondrial_inner_membrane


id: GOCC:0005746
description: Mitochondrial respirasome
memo: https://amigo.geneontology.org/amigo/term/GO:0005746
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1121256_STRINGid_GOCC:0005746_Mitochondrial_respirasome


id: GOCC:0005747
description: Mitochondrial respiratory chain complex I
memo: https://amigo.geneontology.org/amigo/term/GO:0005747
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1121256_STRINGid_GOCC:0005747_Mitochondrial_respiratory_chain_complex_I


id: GOCC:0005759
description: Mitochondrial matrix
memo: https://amigo.geneontology.org/amigo/term/GO:0005759
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1121256_STRINGid_GOCC:0005759_Mitochondrial_matrix


id: GOCC:0005765
description: Lysosomal membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0005765
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1121256_STRINGid_GOCC:0005765_Lysosomal_membrane


id: GOCC:0005774
description: Vacuolar membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0005774
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1121256_STRINGid_GOCC:0005774_Vacuolar_membrane


id: GOCC:0005783
description: Endoplasmic reticulum
memo: https://amigo.geneontology.org/amigo/term/GO:0005783
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1121256_STRINGid_GOCC:0005783_Endoplasmic_reticulum


id: GOCC:0005788
description: Endoplasmic reticulum lumen
memo: https://amigo.geneontology.org/amigo/term/GO:0005788
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1121256_STRINGid_GOCC:0005788_Endoplasmic_reticulum_lumen


id: GOCC:0005789
description: Endoplasmic reticulum membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0005789
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1121256_STRINGid_GOCC:0005789_Endoplasmic_reticulum_membrane


id: GOCC:0005798
description: Golgi-associated vesicle
memo: https://amigo.geneontology.org/amigo/term/GO:0005798
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1121256_STRINGid_GOCC:0005798_Golgi-associated_vesicle


id: GOCC:0005815
description: Microtubule organizing center
memo: https://amigo.geneontology.org/amigo/term/GO:0005815
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1121256_STRINGid_GOCC:0005815_Microtubule_organizing_center


id: GOCC:0005835
description: Fatty acid synthase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005835
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1121256_STRINGid_GOCC:0005835_Fatty_acid_synthase_complex


id: GOCC:0005839
description: Proteasome core complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005839
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1121256_STRINGid_GOCC:0005839_Proteasome_core_complex


id: GOCC:0005847
description: mRNA cleavage and polyadenylation specificity factor complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005847
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1121256_STRINGid_GOCC:0005847_mRNA_cleavage_and_polyadenylation_specificity_factor_complex


id: GOCC:0005849
description: mRNA cleavage factor complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005849
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1121256_STRINGid_GOCC:0005849_mRNA_cleavage_factor_complex


id: GOCC:0005854
description: Nascent polypeptide-associated complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005854
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1121256_STRINGid_GOCC:0005854_Nascent_polypeptide-associated_complex


id: GOCC:0005882
description: Intermediate filament
memo: https://amigo.geneontology.org/amigo/term/GO:0005882
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1121256_STRINGid_GOCC:0005882_Intermediate_filament


id: GOCC:0005887
description: Integral component of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0005887
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1121256_STRINGid_GOCC:0005887_Integral_component_of_plasma_membrane


id: GOCC:0005911
description: Cell-cell junction
memo: https://amigo.geneontology.org/amigo/term/GO:0005911
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1121256_STRINGid_GOCC:0005911_Cell-cell_junction


id: GOCC:0005945
description: 6-phosphofructokinase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005945
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1121256_STRINGid_GOCC:0005945_6-phosphofructokinase_complex


id: GOCC:0005948
description: Acetolactate synthase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005948
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1121256_STRINGid_GOCC:0005948_Acetolactate_synthase_complex


id: GOCC:0005951
description: Carbamoyl-phosphate synthase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005951
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1121256_STRINGid_GOCC:0005951_Carbamoyl-phosphate_synthase_complex


id: GOCC:0005963
description: Magnesium-dependent protein serine/threonine phosphatase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005963
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1121256_STRINGid_GOCC:0005963_Magnesium-dependent_protein_serine/threonine_phosphatase_complex


id: GOCC:0005971
description: Ribonucleoside-diphosphate reductase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005971
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1121256_STRINGid_GOCC:0005971_Ribonucleoside-diphosphate_reductase_complex


id: GOCC:0008076
description: Voltage-gated potassium channel complex
memo: https://amigo.geneontology.org/amigo/term/GO:0008076
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1121256_STRINGid_GOCC:0008076_Voltage-gated_potassium_channel_complex


id: GOCC:0008287
description: Protein serine/threonine phosphatase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0008287
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1121256_STRINGid_GOCC:0008287_Protein_serine/threonine_phosphatase_complex


id: GOCC:0009279
description: Cell outer membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0009279
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1121256_STRINGid_GOCC:0009279_Cell_outer_membrane


id: GOCC:0009288
description: Bacterial-type flagellum
memo: https://amigo.geneontology.org/amigo/term/GO:0009288
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1121256_STRINGid_GOCC:0009288_Bacterial-type_flagellum


id: GOCC:0009316
description: 3-isopropylmalate dehydratase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009316
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1121256_STRINGid_GOCC:0009316_3-isopropylmalate_dehydratase_complex


id: GOCC:0009317
description: acetyl-CoA carboxylase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009317
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1121256_STRINGid_GOCC:0009317_acetyl-CoA_carboxylase_complex


id: GOCC:0009318
description: Exodeoxyribonuclease VII complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009318
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1121256_STRINGid_GOCC:0009318_Exodeoxyribonuclease_VII_complex


id: GOCC:0009326
description: Formate dehydrogenase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009326
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1121256_STRINGid_GOCC:0009326_Formate_dehydrogenase_complex


id: GOCC:0009336
description: Sulfate adenylyltransferase complex (ATP)
memo: https://amigo.geneontology.org/amigo/term/GO:0009336
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1121256_STRINGid_GOCC:0009336_Sulfate_adenylyltransferase_complex_(ATP)


id: GOCC:0009337
description: Sulfite reductase complex (NADPH)
memo: https://amigo.geneontology.org/amigo/term/GO:0009337
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1121256_STRINGid_GOCC:0009337_Sulfite_reductase_complex_(NADPH)


id: GOCC:0009338
description: Exodeoxyribonuclease V complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009338
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1121256_STRINGid_GOCC:0009338_Exodeoxyribonuclease_V_complex


id: GOCC:0009341
description: Beta-galactosidase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009341
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1121256_STRINGid_GOCC:0009341_Beta-galactosidase_complex


id: GOCC:0009347
description: Aspartate carbamoyltransferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009347
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1121256_STRINGid_GOCC:0009347_Aspartate_carbamoyltransferase_complex


id: GOCC:0009349
description: Riboflavin synthase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009349
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1121256_STRINGid_GOCC:0009349_Riboflavin_synthase_complex


id: GOCC:0009360
description: DNA polymerase III complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009360
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1121256_STRINGid_GOCC:0009360_DNA_polymerase_III_complex


id: GOCC:0009366
description: Enterobactin synthetase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009366
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1121256_STRINGid_GOCC:0009366_Enterobactin_synthetase_complex


id: GOCC:0009368
description: Endopeptidase Clp complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009368
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1121256_STRINGid_GOCC:0009368_Endopeptidase_Clp_complex


id: GOCC:0009375
description: Ferredoxin hydrogenase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009375
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1121256_STRINGid_GOCC:0009375_Ferredoxin_hydrogenase_complex


id: GOCC:0009376
description: HslUV protease complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009376
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1121256_STRINGid_GOCC:0009376_HslUV_protease_complex


id: GOCC:0009379
description: Holliday junction helicase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009379
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1121256_STRINGid_GOCC:0009379_Holliday_junction_helicase_complex


