# geneInfo

ensembl_gene_id: SAMN02746041_00007
symbol: SMC16135.1
gene_biotype: protein_coding
description:
  Amino acid/amide ABC transporter membrane protein 2, HAAT family (TC 3.A.1.4.-); Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: SAMN02746041_00008
symbol: SMC16136.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: SAMN02746041_00010
symbol: mqnD
gene_biotype: protein_coding
description:
  1,4-dihydroxy-6-naphthoate synthase; Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2); Belongs to the MqnA/MqnD family. MqnD subfamily.


ensembl_gene_id: SAMN02746041_00025
symbol: eno
gene_biotype: protein_coding
description:
  Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.


ensembl_gene_id: SAMN02746041_00026
symbol: coaE
gene_biotype: protein_coding
description:
  dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.


ensembl_gene_id: SAMN02746041_00043
symbol: cheD
gene_biotype: protein_coding
description:
  HDIG domain-containing protein; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.


ensembl_gene_id: SAMN02746041_00049
symbol: selA
gene_biotype: protein_coding
description:
  L-seryl-tRNA(Sec) selenium transferase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis.


ensembl_gene_id: SAMN02746041_00050
symbol: mfd
gene_biotype: protein_coding
description:
  Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.


ensembl_gene_id: SAMN02746041_00056
symbol: glgC
gene_biotype: protein_coding
description:
  Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.


ensembl_gene_id: SAMN02746041_00058
symbol: gatA
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).


ensembl_gene_id: SAMN02746041_00059
symbol: gatC
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.


ensembl_gene_id: SAMN02746041_00067
symbol: SMC16422.1
gene_biotype: protein_coding
description:
  Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: SAMN02746041_00071
symbol: cbiD
gene_biotype: protein_coding
description:
  cobalt-precorrin-5B (C1)-methyltransferase; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A.


ensembl_gene_id: SAMN02746041_00078
symbol: msrA
gene_biotype: protein_coding
description:
  Peptide methionine sulfoxide reductase msrA/msrB; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.


ensembl_gene_id: SAMN02746041_00083
symbol: SMC16473.1
gene_biotype: protein_coding
description:
  Chromosome partitioning ATPase, Mrp family, contains Fe-S cluster; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.


ensembl_gene_id: SAMN02746041_00098
symbol: SMC16510.1
gene_biotype: protein_coding
description:
  DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains.


ensembl_gene_id: SAMN02746041_00115
symbol: rhlB
gene_biotype: protein_coding
description:
  ATP-dependent RNA helicase RhlB; DEAD-box RNA helicase involved in RNA degradation. Has RNA- dependent ATPase activity and unwinds double-stranded RNA.


ensembl_gene_id: SAMN02746041_00120
symbol: uvrB
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate  [...]


ensembl_gene_id: SAMN02746041_00125
symbol: nth
gene_biotype: protein_coding
description:
  DNA-(apurinic or apyrimidinic site) lyase; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.


ensembl_gene_id: SAMN02746041_00165
symbol: ispF
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP).


ensembl_gene_id: SAMN02746041_00166
symbol: ispD
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP).


ensembl_gene_id: SAMN02746041_00170
symbol: ruvB
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase subunit RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.


ensembl_gene_id: SAMN02746041_00171
symbol: ruvA
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase subunit RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.


ensembl_gene_id: SAMN02746041_00172
symbol: ruvC
gene_biotype: protein_coding
description:
  Holliday junction endonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.


ensembl_gene_id: SAMN02746041_00174
symbol: rlmE
gene_biotype: protein_coding
description:
  23S rRNA Um-2552 2'-O-methyltransferase; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit.


ensembl_gene_id: SAMN02746041_00184
symbol: atpB
gene_biotype: protein_coding
description:
  ATP synthase F0 subcomplex A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.


ensembl_gene_id: SAMN02746041_00185
symbol: atpE
gene_biotype: protein_coding
description:
  ATP synthase F0 subcomplex C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: SAMN02746041_00187
symbol: atpF
gene_biotype: protein_coding
description:
  ATP synthase B/B' CF(0); Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.


ensembl_gene_id: SAMN02746041_00196
symbol: trmL
gene_biotype: protein_coding
description:
  tRNA (cytidine/uridine-2'-O-)-methyltransferase; Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S-adenosyl-L-methionine to the 2'-OH of the wobble nucleotide.


ensembl_gene_id: SAMN02746041_00199
symbol: aroK
gene_biotype: protein_coding
description:
  Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.


ensembl_gene_id: SAMN02746041_00272
symbol: SMC17299.1
gene_biotype: protein_coding
description:
  tRNA (adenine-58-N(1)-) methyltransferase; Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA.


ensembl_gene_id: SAMN02746041_00274
symbol: SMC17307.1
gene_biotype: protein_coding
description:
  Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.


ensembl_gene_id: SAMN02746041_00278
symbol: pcm
gene_biotype: protein_coding
description:
  protein-L-isoaspartate(D-aspartate) O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins.


ensembl_gene_id: SAMN02746041_00293
symbol: SMC17338.1
gene_biotype: protein_coding
description:
  6-phosphofructokinase 1; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.


ensembl_gene_id: SAMN02746041_00298
symbol: SMC17357.1
gene_biotype: protein_coding
description:
  Anaerobic selenocysteine-containing dehydrogenase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: SAMN02746041_00303
symbol: SMC17368.1
gene_biotype: protein_coding
description:
  Anaerobic cobaltochelatase; Catalyzes the insertion of Co(2+) into sirohydrochlorin. Belongs to the CbiK family.


ensembl_gene_id: SAMN02746041_00310
symbol: pyrR
gene_biotype: protein_coding
description:
  Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant.


ensembl_gene_id: SAMN02746041_00312
symbol: SMC17389.1
gene_biotype: protein_coding
description:
  phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).


ensembl_gene_id: SAMN02746041_00315
symbol: SMC17402.1
gene_biotype: protein_coding
description:
  Amino acid/amide ABC transporter membrane protein 1, HAAT family (TC 3.A.1.4.-); Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: SAMN02746041_00316
symbol: SMC17405.1
gene_biotype: protein_coding
description:
  Amino acid/amide ABC transporter membrane protein 2, HAAT family; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: SAMN02746041_00320
symbol: SMC17412.1
gene_biotype: protein_coding
description:
  2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.


ensembl_gene_id: SAMN02746041_00324
symbol: pckA
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate carboxykinase (ATP); Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA.


ensembl_gene_id: SAMN02746041_00326
symbol: rnc
gene_biotype: protein_coding
description:
  RNAse III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.


ensembl_gene_id: SAMN02746041_00329
symbol: era
gene_biotype: protein_coding
description:
  GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.


ensembl_gene_id: SAMN02746041_00340
symbol: mdh
gene_biotype: protein_coding
description:
  Malate dehydrogenase (NAD); Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.


ensembl_gene_id: SAMN02746041_00348
symbol: SMC17582.1
gene_biotype: protein_coding
description:
  Phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.


ensembl_gene_id: SAMN02746041_00376
symbol: SMC17696.1
gene_biotype: protein_coding
description:
  Amino acid/amide ABC transporter membrane protein 1, HAAT family; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: SAMN02746041_00378
symbol: SMC17701.1
gene_biotype: protein_coding
description:
  Indolepyruvate ferredoxin oxidoreductase alpha subunit; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates.


ensembl_gene_id: SAMN02746041_00412
symbol: nnrE
gene_biotype: protein_coding
description:
  NAD(P)H-hydrate epimerase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration.  Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of bot [...]


ensembl_gene_id: SAMN02746041_00413
symbol: acpS
gene_biotype: protein_coding
description:
  Holo-[acyl-carrier protein] synthase; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family.


ensembl_gene_id: SAMN02746041_00414
symbol: pdxJ
gene_biotype: protein_coding
description:
  Pyridoxine 5'-phosphate synthase; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate.


ensembl_gene_id: SAMN02746041_00415
symbol: ybeY
gene_biotype: protein_coding
description:
  Probable rRNA maturation factor; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.


ensembl_gene_id: SAMN02746041_00423
symbol: nadE
gene_biotype: protein_coding
description:
  NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source; Belongs to the NAD synthetase family.


ensembl_gene_id: SAMN02746041_00435
symbol: queH
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr).


ensembl_gene_id: SAMN02746041_00439
symbol: coaX
gene_biotype: protein_coding
description:
  Pantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.


ensembl_gene_id: SAMN02746041_00440
symbol: glmM
gene_biotype: protein_coding
description:
  Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.


ensembl_gene_id: SAMN02746041_00441
symbol: SMC18001.1
gene_biotype: protein_coding
description:
  Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives.


ensembl_gene_id: SAMN02746041_00442
symbol: ftsH
gene_biotype: protein_coding
description:
  Membrane protease FtsH catalytic subunit; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family.  In the central section; belongs to the AAA ATPase family.


ensembl_gene_id: SAMN02746041_00447
symbol: SMC18019.1
gene_biotype: protein_coding
description:
  dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.


ensembl_gene_id: SAMN02746041_00448
symbol: SMC18023.1
gene_biotype: protein_coding
description:
  dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family.


ensembl_gene_id: SAMN02746041_00453
symbol: ndk
gene_biotype: protein_coding
description:
  Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.


ensembl_gene_id: SAMN02746041_00459
symbol: tolB
gene_biotype: protein_coding
description:
  TolB protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.


ensembl_gene_id: SAMN02746041_00460
symbol: pal
gene_biotype: protein_coding
description:
  Peptidoglycan-associated lipoprotein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.


ensembl_gene_id: SAMN02746041_00461
symbol: cpoB
gene_biotype: protein_coding
description:
  Tol-pal system protein YbgF; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family.


ensembl_gene_id: SAMN02746041_00468
symbol: engB
gene_biotype: protein_coding
description:
  GTP-binding protein; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.


ensembl_gene_id: SAMN02746041_00471
symbol: hisG
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase (homohexameric); Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Long subfamily.


ensembl_gene_id: SAMN02746041_00472
symbol: hisI
gene_biotype: protein_coding
description:
  phosphoribosyl-AMP cyclohydrolase; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP.


ensembl_gene_id: SAMN02746041_00473
symbol: rlmN
gene_biotype: protein_coding
description:
  23S rRNA m(2)A-2503 methyltransferase; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family.


ensembl_gene_id: SAMN02746041_00512
symbol: SMC18724.1
gene_biotype: protein_coding
description:
  Metal-binding trascriptional regulator, contains putative Fe-S cluster and ArsR family DNA binding domain.


ensembl_gene_id: SAMN02746041_00522
symbol: SMC18758.1
gene_biotype: protein_coding
description:
  Purine-nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.


ensembl_gene_id: SAMN02746041_00523
symbol: mtaD
gene_biotype: protein_coding
description:
  5-methylthioadenosine/S-adenosylhomocysteine deaminase; Catalyzes the deamination of 5-methylthioadenosine and S- adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine. Belongs to the metallo-dependent hydrolases superfamily. MTA/SAH deaminase family.


ensembl_gene_id: SAMN02746041_00526
symbol: valS
gene_biotype: protein_coding
description:
  valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.


ensembl_gene_id: SAMN02746041_00528
symbol: nfo
gene_biotype: protein_coding
description:
  Endonuclease IV; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin.


ensembl_gene_id: SAMN02746041_00544
symbol: mnmA
gene_biotype: protein_coding
description:
  tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.


ensembl_gene_id: SAMN02746041_00572
symbol: SMC18876.1
gene_biotype: protein_coding
description:
  Formate dehydrogenase major subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: SAMN02746041_00581
symbol: rplM
gene_biotype: protein_coding
description:
  LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.


ensembl_gene_id: SAMN02746041_00583
symbol: argC
gene_biotype: protein_coding
description:
  N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.


ensembl_gene_id: SAMN02746041_00584
symbol: truA
gene_biotype: protein_coding
description:
  tRNA pseudouridine38-40 synthase; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.


ensembl_gene_id: SAMN02746041_00614
symbol: mltG
gene_biotype: protein_coding
description:
  UPF0755 protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation.


ensembl_gene_id: SAMN02746041_00622
symbol: hisD
gene_biotype: protein_coding
description:
  Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.


ensembl_gene_id: SAMN02746041_00623
symbol: rlpA
gene_biotype: protein_coding
description:
  Rare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.


ensembl_gene_id: SAMN02746041_00625
symbol: aspS
gene_biotype: protein_coding
description:
  aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.


ensembl_gene_id: SAMN02746041_00630
symbol: SMC19217.1
gene_biotype: protein_coding
description:
  Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.


ensembl_gene_id: SAMN02746041_00633
symbol: SMC19224.1
gene_biotype: protein_coding
description:
  Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.


ensembl_gene_id: SAMN02746041_00640
symbol: SMC19250.1
gene_biotype: protein_coding
description:
  Flagellar basal-body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein.


ensembl_gene_id: SAMN02746041_00643
symbol: SMC19341.1
gene_biotype: protein_coding
description:
  Flagellar FliL protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.


ensembl_gene_id: SAMN02746041_00647
symbol: fliP
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.


ensembl_gene_id: SAMN02746041_00648
symbol: fliQ
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.


ensembl_gene_id: SAMN02746041_00649
symbol: SMC19352.1
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family.


ensembl_gene_id: SAMN02746041_00650
symbol: flhB
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family.


ensembl_gene_id: SAMN02746041_00651
symbol: flhA
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.


ensembl_gene_id: SAMN02746041_00660
symbol: flgH
gene_biotype: protein_coding
description:
  Flagellar L-ring protein precursor FlgH; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.


ensembl_gene_id: SAMN02746041_00661
symbol: flgI
gene_biotype: protein_coding
description:
  Flagellar P-ring protein precursor FlgI; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.


ensembl_gene_id: SAMN02746041_00667
symbol: SMC19414.1
gene_biotype: protein_coding
description:
  Flagellin C-terminal helical region; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.


ensembl_gene_id: SAMN02746041_00675
symbol: cheB
gene_biotype: protein_coding
description:
  Two-component system, chemotaxis family, response regulator CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.


ensembl_gene_id: SAMN02746041_00678
symbol: cheD-2
gene_biotype: protein_coding
description:
  Chemotaxis protein CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.


ensembl_gene_id: SAMN02746041_00679
symbol: SMC19451.1
gene_biotype: protein_coding
description:
  Chemotaxis protein methyltransferase CheR; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP.


ensembl_gene_id: SAMN02746041_00690
symbol: SMC19481.1
gene_biotype: protein_coding
description:
  Thiol:disulfide interchange protein DsbC; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily.


ensembl_gene_id: SAMN02746041_00703
symbol: lspA
gene_biotype: protein_coding
description:
  Signal peptidase II Aspartic peptidase. MEROPS family A08; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.


ensembl_gene_id: SAMN02746041_00704
symbol: ileS
gene_biotype: protein_coding
description:
  Isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily.


ensembl_gene_id: SAMN02746041_00705
symbol: groL
gene_biotype: protein_coding
description:
  Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.


ensembl_gene_id: SAMN02746041_00706
symbol: groS
gene_biotype: protein_coding
description:
  Chaperonin GroES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.


ensembl_gene_id: SAMN02746041_00713
symbol: fabH
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.


ensembl_gene_id: SAMN02746041_00722
symbol: mnmG
gene_biotype: protein_coding
description:
  tRNA uridine 5-carboxymethylaminomethyl modification enzyme; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.


ensembl_gene_id: SAMN02746041_00725
symbol: gltX
gene_biotype: protein_coding
description:
  glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu).


ensembl_gene_id: SAMN02746041_00729
symbol: plsX
gene_biotype: protein_coding
description:
  Phosphate:acyl-[acyl carrier protein] acyltransferase; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.


ensembl_gene_id: SAMN02746041_00733
symbol: SMC19622.1
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: SAMN02746041_00734
symbol: SMC19624.1
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.


ensembl_gene_id: SAMN02746041_00736
symbol: glyA
gene_biotype: protein_coding
description:
  Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.


ensembl_gene_id: SAMN02746041_00737
symbol: SMC19629.1
gene_biotype: protein_coding
description:
  Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.


ensembl_gene_id: SAMN02746041_00739
symbol: ribBA
gene_biotype: protein_coding
description:
  GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.


ensembl_gene_id: SAMN02746041_00740
symbol: ribH
gene_biotype: protein_coding
description:
  6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.


ensembl_gene_id: SAMN02746041_00741
symbol: nusB
gene_biotype: protein_coding
description:
  NusB antitermination factor; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.


ensembl_gene_id: SAMN02746041_00755
symbol: secA
gene_biotype: protein_coding
description:
  Protein translocase subunit secA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family.


ensembl_gene_id: SAMN02746041_00756
symbol: argJ
gene_biotype: protein_coding
description:
  Glutamate N-acetyltransferase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family.


ensembl_gene_id: SAMN02746041_00769
symbol: tatA
gene_biotype: protein_coding
description:
  Sec-independent protein translocase protein TatB; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. Belongs to the TatA/E family.


ensembl_gene_id: SAMN02746041_00770
symbol: tatC
gene_biotype: protein_coding
description:
  Sec-independent protein translocase TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides.


ensembl_gene_id: SAMN02746041_00771
symbol: SMC19980.1
gene_biotype: protein_coding
description:
  XTP/dITP diphosphohydrolase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.


ensembl_gene_id: SAMN02746041_00774
symbol: SMC19984.1
gene_biotype: protein_coding
description:
  Pyrophosphate-dependent phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family.


ensembl_gene_id: SAMN02746041_00775
symbol: SMC19989.1
gene_biotype: protein_coding
description:
  Putative hydroxymethylpyrimidine transporter CytX; Belongs to the purine-cytosine permease (2.A.39) family.


ensembl_gene_id: SAMN02746041_00781
symbol: tig
gene_biotype: protein_coding
description:
  Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.


ensembl_gene_id: SAMN02746041_00782
symbol: clpP
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease proteolytic subunit ClpP; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: SAMN02746041_00783
symbol: clpX
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.


ensembl_gene_id: SAMN02746041_00784
symbol: lon
gene_biotype: protein_coding
description:
  ATP-dependent proteinase. Serine peptidase. MEROPS family S16; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.


ensembl_gene_id: SAMN02746041_00789
symbol: SMC20036.1
gene_biotype: protein_coding
description:
  4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: SAMN02746041_00794
symbol: aroC
gene_biotype: protein_coding
description:
  Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.


ensembl_gene_id: SAMN02746041_00795
symbol: clpS
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease adaptor protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.


ensembl_gene_id: SAMN02746041_00797
symbol: aat
gene_biotype: protein_coding
description:
  leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine.


ensembl_gene_id: SAMN02746041_00799
symbol: SMC20072.1
gene_biotype: protein_coding
description:
  cob(I)yrinic acid a,c-diamide adenosyltransferase; Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids.


ensembl_gene_id: SAMN02746041_00801
symbol: efp
gene_biotype: protein_coding
description:
  Translation elongation factor P (EF-P); Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.


ensembl_gene_id: SAMN02746041_00804
symbol: SMC20087.1
gene_biotype: protein_coding
description:
  Lipopolysaccharide biosynthesis regulator YciM, contains six TPR domains and a predicted metal-binding C-terminal domain.


ensembl_gene_id: SAMN02746041_00823
symbol: xerC
gene_biotype: protein_coding
description:
  Integrase/recombinase XerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.


ensembl_gene_id: SAMN02746041_00824
symbol: hslV
gene_biotype: protein_coding
description:
  ATP dependent peptidase CodWX, CodW component. Threonine peptidase. MEROPS family T01B; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery.


ensembl_gene_id: SAMN02746041_00825
symbol: hslU
gene_biotype: protein_coding
description:
  ATP-dependent HslUV protease ATP-binding subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis.


ensembl_gene_id: SAMN02746041_00826
symbol: argB
gene_biotype: protein_coding
description:
  N-acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.


ensembl_gene_id: SAMN02746041_00827
symbol: argD
gene_biotype: protein_coding
description:
  Acetylornithine aminotransferase apoenzyme; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.


ensembl_gene_id: SAMN02746041_00828
symbol: SMC20125.1
gene_biotype: protein_coding
description:
  Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.


ensembl_gene_id: SAMN02746041_00832
symbol: lysA
gene_biotype: protein_coding
description:
  Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.


ensembl_gene_id: SAMN02746041_00833
symbol: dapF
gene_biotype: protein_coding
description:
  Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.


ensembl_gene_id: SAMN02746041_00834
symbol: dapA
gene_biotype: protein_coding
description:
  Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).


ensembl_gene_id: SAMN02746041_00835
symbol: dapB
gene_biotype: protein_coding
description:
  Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.


ensembl_gene_id: SAMN02746041_00836
symbol: dapL
gene_biotype: protein_coding
description:
  LL-diaminopimelate aminotransferase apoenzyme; Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL- diaminopimelate.


ensembl_gene_id: SAMN02746041_00839
symbol: tal
gene_biotype: protein_coding
description:
  Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.


ensembl_gene_id: SAMN02746041_00841
symbol: SMC20202.1
gene_biotype: protein_coding
description:
  CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: SAMN02746041_00854
symbol: SMC20262.1
gene_biotype: protein_coding
description:
  Hydrophobic/amphiphilic exporter-1, HAE1 family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: SAMN02746041_00855
symbol: SMC20267.1
gene_biotype: protein_coding
description:
  RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: SAMN02746041_00856
symbol: SMC20270.1
gene_biotype: protein_coding
description:
  Outer membrane protein TolC; CyaE is necessary for transport of calmodulin-sensitive adenylate cyclase-hemolysin (cyclolysin). Belongs to the outer membrane factor (OMF) (TC 1.B.17) family.


ensembl_gene_id: SAMN02746041_00872
symbol: SMC20312.1
gene_biotype: protein_coding
description:
  Tat (twin-arginine translocation) pathway signal sequence; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.


ensembl_gene_id: SAMN02746041_00879
symbol: nuoN
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family.


ensembl_gene_id: SAMN02746041_00882
symbol: nuoK
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit K; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family.


ensembl_gene_id: SAMN02746041_00883
symbol: SMC20338.1
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit J; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: SAMN02746041_00884
symbol: nuoI
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: SAMN02746041_00885
symbol: nuoH
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit H; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone.


ensembl_gene_id: SAMN02746041_00887
symbol: nuoD
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family.


ensembl_gene_id: SAMN02746041_00888
symbol: nuoC
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit C; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family.


ensembl_gene_id: SAMN02746041_00889
symbol: nuoB
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit B; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: SAMN02746041_00890
symbol: nuoA
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit A; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family.


ensembl_gene_id: SAMN02746041_00903
symbol: rimP
gene_biotype: protein_coding
description:
  Ribosome maturation factor RimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.


ensembl_gene_id: SAMN02746041_00906
symbol: infB
gene_biotype: protein_coding
description:
  Bacterial translation initiation factor 2 (bIF-2); One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.


ensembl_gene_id: SAMN02746041_00908
symbol: rbfA
gene_biotype: protein_coding
description:
  Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.


ensembl_gene_id: SAMN02746041_00910
symbol: truB
gene_biotype: protein_coding
description:
  tRNA pseudouridine55 synthase; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.


ensembl_gene_id: SAMN02746041_00911
symbol: rpsO
gene_biotype: protein_coding
description:
  SSU ribosomal protein S15P; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.


ensembl_gene_id: SAMN02746041_00912
symbol: pnp
gene_biotype: protein_coding
description:
  Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.


ensembl_gene_id: SAMN02746041_00916
symbol: secF
gene_biotype: protein_coding
description:
  Protein translocase subunit secF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: SAMN02746041_00917
symbol: secD
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: SAMN02746041_00918
symbol: yajC
gene_biotype: protein_coding
description:
  Protein translocase subunit yajC; The SecYEG-SecDF-YajC-YidC holo-translocon (HTL) protein secretase/insertase is a supercomplex required for protein secretion, insertion of proteins into membranes, and assembly of membrane protein complexes. While the SecYEG complex is essential for assembly of a number of proteins and complexes, the SecDF-YajC-YidC subcomplex facilitates these functions.


ensembl_gene_id: SAMN02746041_00919
symbol: tgt
gene_biotype: protein_coding
description:
  tRNA-guanine transglycosylase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the [...]


ensembl_gene_id: SAMN02746041_00920
symbol: queA
gene_biotype: protein_coding
description:
  S-adenosylmethionine--tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).


ensembl_gene_id: SAMN02746041_00922
symbol: SMC20478.1
gene_biotype: protein_coding
description:
  Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.


ensembl_gene_id: SAMN02746041_00932
symbol: uvrC
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.


ensembl_gene_id: SAMN02746041_00965
symbol: SMC20608.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage; Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily.


ensembl_gene_id: SAMN02746041_00992
symbol: tpx
gene_biotype: protein_coding
description:
  Thiol peroxidase (atypical 2-Cys peroxiredoxin); Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.


ensembl_gene_id: SAMN02746041_01034
symbol: SMC20847.1
gene_biotype: protein_coding
description:
  D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: SAMN02746041_01050
symbol: dacA
gene_biotype: protein_coding
description:
  TIGR00159 family protein; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria.


ensembl_gene_id: SAMN02746041_01062
symbol: rsmH
gene_biotype: protein_coding
description:
  16S rRNA (cytosine1402-N4)-methyltransferase; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.


ensembl_gene_id: SAMN02746041_01065
symbol: murE
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily.


ensembl_gene_id: SAMN02746041_01066
symbol: murF
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.


ensembl_gene_id: SAMN02746041_01067
symbol: murD
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.


ensembl_gene_id: SAMN02746041_01072
symbol: ftsA
gene_biotype: protein_coding
description:
  Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.


ensembl_gene_id: SAMN02746041_01073
symbol: ftsZ
gene_biotype: protein_coding
description:
  Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.


ensembl_gene_id: SAMN02746041_01103
symbol: SMC21037.1
gene_biotype: protein_coding
description:
  Molybdopterin molybdochelatase; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.


ensembl_gene_id: SAMN02746041_01104
symbol: murJ
gene_biotype: protein_coding
description:
  Putative peptidoglycan lipid II flippase; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.


ensembl_gene_id: SAMN02746041_01114
symbol: SMC21061.1
gene_biotype: protein_coding
description:
  Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: SAMN02746041_01116
symbol: rplU
gene_biotype: protein_coding
description:
  LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.


ensembl_gene_id: SAMN02746041_01118
symbol: obg
gene_biotype: protein_coding
description:
  GTP-binding protein; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.


ensembl_gene_id: SAMN02746041_01134
symbol: cbiA
gene_biotype: protein_coding
description:
  Hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing); Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.


ensembl_gene_id: SAMN02746041_01140
symbol: cobT
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB).


ensembl_gene_id: SAMN02746041_01143
symbol: grpE
gene_biotype: protein_coding
description:
  Molecular chaperone GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP [...]


ensembl_gene_id: SAMN02746041_01144
symbol: hrcA
gene_biotype: protein_coding
description:
  Heat-inducible transcription repressor HrcA; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons.


ensembl_gene_id: SAMN02746041_01150
symbol: pyrE
gene_biotype: protein_coding
description:
  Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).


ensembl_gene_id: SAMN02746041_01154
symbol: SMC21223.1
gene_biotype: protein_coding
description:
  Cation diffusion facilitator family transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.


ensembl_gene_id: SAMN02746041_01155
symbol: hypA
gene_biotype: protein_coding
description:
  Hydrogenase nickel incorporation protein HypA/HybF; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.


ensembl_gene_id: SAMN02746041_01157
symbol: SMC21232.1
gene_biotype: protein_coding
description:
  Hydrogenase maturation protein, carbamoyltransferase HypF; Involved in the maturation of [NiFe] hydrogenases. Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of [NiFe]-hydrogenases. HypF functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide.


ensembl_gene_id: SAMN02746041_01171
symbol: ubiE
gene_biotype: protein_coding
description:
  Demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2).


ensembl_gene_id: SAMN02746041_01173
symbol: SMC21310.1
gene_biotype: protein_coding
description:
  23S rRNA m(5)U-1939 methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.


ensembl_gene_id: SAMN02746041_01174
symbol: SMC21312.1
gene_biotype: protein_coding
description:
  Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits).


ensembl_gene_id: SAMN02746041_01179
symbol: leuA
gene_biotype: protein_coding
description:
  2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily.


ensembl_gene_id: SAMN02746041_01190
symbol: panB
gene_biotype: protein_coding
description:
  Ketopantoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family.


ensembl_gene_id: SAMN02746041_01209
symbol: SMC21544.1
gene_biotype: protein_coding
description:
  CDP-L-myo-inositol myo-inositolphosphotransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: SAMN02746041_01212
symbol: lon-2
gene_biotype: protein_coding
description:
  ATP-dependent Lon protease; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.


ensembl_gene_id: SAMN02746041_01215
symbol: SMC21577.1
gene_biotype: protein_coding
description:
  2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family.


ensembl_gene_id: SAMN02746041_01216
symbol: recA
gene_biotype: protein_coding
description:
  Recombination protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.


ensembl_gene_id: SAMN02746041_01217
symbol: alaS
gene_biotype: protein_coding
description:
  alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.


ensembl_gene_id: SAMN02746041_01219
symbol: SMC21586.1
gene_biotype: protein_coding
description:
  RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: SAMN02746041_01225
symbol: SMC21606.1
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.


ensembl_gene_id: SAMN02746041_01231
symbol: minE
gene_biotype: protein_coding
description:
  Cell division topological specificity factor MinE; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell.


ensembl_gene_id: SAMN02746041_01233
symbol: minC
gene_biotype: protein_coding
description:
  Septum site-determining protein MinC; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family.


ensembl_gene_id: SAMN02746041_01236
symbol: SMC21622.1
gene_biotype: protein_coding
description:
  Formate dehydrogenase formation protein; Necessary for formate dehydrogenase activity. Belongs to the FdhE family.


ensembl_gene_id: SAMN02746041_01238
symbol: SMC21625.1
gene_biotype: protein_coding
description:
  Formate dehydrogenase alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: SAMN02746041_01241
symbol: purA
gene_biotype: protein_coding
description:
  Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.


ensembl_gene_id: SAMN02746041_01248
symbol: ftsY
gene_biotype: protein_coding
description:
  Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components.


ensembl_gene_id: SAMN02746041_01253
symbol: recC
gene_biotype: protein_coding
description:
  DNA helicase/exodeoxyribonuclease V, gamma subunit; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recomb [...]


ensembl_gene_id: SAMN02746041_01254
symbol: recB
gene_biotype: protein_coding
description:
  DNA helicase/exodeoxyribonuclease V, beta subunit; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombi [...]


ensembl_gene_id: SAMN02746041_01259
symbol: recD
gene_biotype: protein_coding
description:
  DNA helicase/exodeoxyribonuclease V, alpha subunit; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recomb [...]


ensembl_gene_id: SAMN02746041_01277
symbol: proB
gene_biotype: protein_coding
description:
  Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.


ensembl_gene_id: SAMN02746041_01278
symbol: proA
gene_biotype: protein_coding
description:
  Glutamate-5-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.


ensembl_gene_id: SAMN02746041_01279
symbol: nadD
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).


ensembl_gene_id: SAMN02746041_01280
symbol: rsfS
gene_biotype: protein_coding
description:
  Ribosome-associated protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.


ensembl_gene_id: SAMN02746041_01286
symbol: rplY
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.


ensembl_gene_id: SAMN02746041_01287
symbol: pth
gene_biotype: protein_coding
description:
  peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.


ensembl_gene_id: SAMN02746041_01288
symbol: hppA
gene_biotype: protein_coding
description:
  K(+)-stimulated pyrophosphate-energized sodium pump; Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na(+) movement across the membrane. Belongs to the H(+)-translocating pyrophosphatase (TC 3.A.10) family. K(+)-stimulated subfamily.


ensembl_gene_id: SAMN02746041_01291
symbol: SMC21850.1
gene_biotype: protein_coding
description:
  Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: SAMN02746041_01315
symbol: proS
gene_biotype: protein_coding
description:
  prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves dea [...]


ensembl_gene_id: SAMN02746041_01345
symbol: SMC22006.1
gene_biotype: protein_coding
description:
  Glutamine transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: SAMN02746041_01361
symbol: SMC22064.1
gene_biotype: protein_coding
description:
  TRAP-type mannitol/chloroaromatic compound transport system, substrate-binding protein; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.


ensembl_gene_id: SAMN02746041_01371
symbol: SMC22235.1
gene_biotype: protein_coding
description:
  Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.


ensembl_gene_id: SAMN02746041_01380
symbol: tmk
gene_biotype: protein_coding
description:
  Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.


ensembl_gene_id: SAMN02746041_01383
symbol: metG
gene_biotype: protein_coding
description:
  methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.


ensembl_gene_id: SAMN02746041_01386
symbol: SMC22305.1
gene_biotype: protein_coding
description:
  Cu(I)/Ag(I) efflux system membrane protein CusA/SilA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: SAMN02746041_01387
symbol: SMC22316.1
gene_biotype: protein_coding
description:
  Membrane fusion protein, Cu(I)/Ag(I) efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: SAMN02746041_01401
symbol: metK
gene_biotype: protein_coding
description:
  Methionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.


ensembl_gene_id: SAMN02746041_01402
symbol: ahcY
gene_biotype: protein_coding
description:
  Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.


ensembl_gene_id: SAMN02746041_01406
symbol: SMC22370.1
gene_biotype: protein_coding
description:
  16S rRNA (cytosine967-C5)-methyltransferase; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.


ensembl_gene_id: SAMN02746041_01408
symbol: fmt
gene_biotype: protein_coding
description:
  methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.


ensembl_gene_id: SAMN02746041_01409
symbol: def
gene_biotype: protein_coding
description:
  Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.


ensembl_gene_id: SAMN02746041_01410
symbol: priA
gene_biotype: protein_coding
description:
  Replication restart DNA helicase PriA; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.


ensembl_gene_id: SAMN02746041_01412
symbol: SMC22377.1
gene_biotype: protein_coding
description:
  DNA-binding protein HU-beta; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.


ensembl_gene_id: SAMN02746041_01415
symbol: ligA
gene_biotype: protein_coding
description:
  DNA ligase (NAD+); DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA; Belongs to the NAD-dependent DNA ligase family. LigA subfamily.


ensembl_gene_id: SAMN02746041_01419
symbol: tilS
gene_biotype: protein_coding
description:
  tRNA(Ile)-lysidine synthase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.


ensembl_gene_id: SAMN02746041_01436
symbol: SMC22422.1
gene_biotype: protein_coding
description:
  Thiosulfate reductase / polysulfide reductase chain A; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: SAMN02746041_01445
symbol: csrA
gene_biotype: protein_coding
description:
  Carbon storage regulator, CsrA; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW.


ensembl_gene_id: SAMN02746041_01446
symbol: fliW
gene_biotype: protein_coding
description:
  Flagellar assembly factor FliW; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum.


ensembl_gene_id: SAMN02746041_01450
symbol: SMC22436.1
gene_biotype: protein_coding
description:
  Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.


ensembl_gene_id: SAMN02746041_01451
symbol: SMC22437.1
gene_biotype: protein_coding
description:
  Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.


ensembl_gene_id: SAMN02746041_01471
symbol: uppP
gene_biotype: protein_coding
description:
  Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.


ensembl_gene_id: SAMN02746041_01476
symbol: xseA
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.


ensembl_gene_id: SAMN02746041_01477
symbol: xseB
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.


ensembl_gene_id: SAMN02746041_01479
symbol: dxs
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.


ensembl_gene_id: SAMN02746041_01481
symbol: rlmH
gene_biotype: protein_coding
description:
  23S rRNA (pseudouridine1915-N3)-methyltransferase; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.


ensembl_gene_id: SAMN02746041_01483
symbol: SMC22469.1
gene_biotype: protein_coding
description:
  Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.


ensembl_gene_id: SAMN02746041_01485
symbol: serS
gene_biotype: protein_coding
description:
  seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).


ensembl_gene_id: SAMN02746041_01496
symbol: dtd
gene_biotype: protein_coding
description:
  D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family.


ensembl_gene_id: SAMN02746041_01514
symbol: hisH
gene_biotype: protein_coding
description:
  Glutamine amidotransferase / cyclase; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF; Belongs to the HisA/HisF family.


ensembl_gene_id: SAMN02746041_01521
symbol: SMC22584.1
gene_biotype: protein_coding
description:
  Phosphate ABC transporter ATP-binding protein, PhoT family; Belongs to the ABC transporter superfamily.


ensembl_gene_id: SAMN02746041_01532
symbol: rnfA
gene_biotype: protein_coding
description:
  Na+-transporting NADH:ubiquinone oxidoreductase subunit E; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.


ensembl_gene_id: SAMN02746041_01535
symbol: SMC22744.1
gene_biotype: protein_coding
description:
  Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family.


ensembl_gene_id: SAMN02746041_01536
symbol: fbp
gene_biotype: protein_coding
description:
  Fructose-bisphosphate aldolase; Catalyzes two subsequent steps in gluconeogenesis: the aldol condensation of dihydroxyacetone phosphate (DHAP) and glyceraldehyde-3- phosphate (GA3P) to fructose-1,6-bisphosphate (FBP), and the dephosphorylation of FBP to fructose-6-phosphate (F6P).


ensembl_gene_id: SAMN02746041_01541
symbol: lpxC
gene_biotype: protein_coding
description:
  UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the LpxC family.


ensembl_gene_id: SAMN02746041_01544
symbol: SMC22765.1
gene_biotype: protein_coding
description:
  D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4).


ensembl_gene_id: SAMN02746041_01545
symbol: aroA
gene_biotype: protein_coding
description:
  3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.


ensembl_gene_id: SAMN02746041_01546
symbol: aroE
gene_biotype: protein_coding
description:
  Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).


ensembl_gene_id: SAMN02746041_01558
symbol: serC
gene_biotype: protein_coding
description:
  Phosphoserine aminotransferase apoenzyme; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily.


ensembl_gene_id: SAMN02746041_01560
symbol: pepA
gene_biotype: protein_coding
description:
  Leucyl aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.


ensembl_gene_id: SAMN02746041_01582
symbol: fumC
gene_biotype: protein_coding
description:
  Fumarase, class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.


ensembl_gene_id: SAMN02746041_01637
symbol: SMC23058.1
gene_biotype: protein_coding
description:
  MFS transporter, DHA2 family, multidrug resistance protein; Belongs to the major facilitator superfamily.


ensembl_gene_id: SAMN02746041_01645
symbol: rsmG
gene_biotype: protein_coding
description:
  16S rRNA m(7)G-527 methyltransferase; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA.


ensembl_gene_id: SAMN02746041_01650
symbol: ugpE
gene_biotype: protein_coding
description:
  Sn-glycerol 3-phosphate transport system permease protein; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.


ensembl_gene_id: SAMN02746041_01651
symbol: SMC23096.1
gene_biotype: protein_coding
description:
  Carbohydrate ABC transporter ATP-binding protein, CUT1 family (TC 3.A.1.1.-); Belongs to the ABC transporter superfamily.


ensembl_gene_id: SAMN02746041_01667
symbol: SMC23138.1
gene_biotype: protein_coding
description:
  Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E.


ensembl_gene_id: SAMN02746041_01673
symbol: SMC23151.1
gene_biotype: protein_coding
description:
  Ribosomal large subunit pseudouridine synthase B; Belongs to the pseudouridine synthase RsuA family.


ensembl_gene_id: SAMN02746041_01674
symbol: trpS
gene_biotype: protein_coding
description:
  tryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: SAMN02746041_01676
symbol: SMC23154.1
gene_biotype: protein_coding
description:
  tRNA nucleotidyltransferase (CCA-adding enzyme); Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.


ensembl_gene_id: SAMN02746041_01677
symbol: xerD
gene_biotype: protein_coding
description:
  Tyrosine recombinase XerD subunit; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.


ensembl_gene_id: SAMN02746041_01682
symbol: SMC23189.1
gene_biotype: protein_coding
description:
  Isocitrate dehydrogenase (NADP); Belongs to the isocitrate and isopropylmalate dehydrogenases family.


ensembl_gene_id: SAMN02746041_01693
symbol: leuC
gene_biotype: protein_coding
description:
  3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.


ensembl_gene_id: SAMN02746041_01702
symbol: recR
gene_biotype: protein_coding
description:
  DNA replication and repair protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.


ensembl_gene_id: SAMN02746041_01703
symbol: SMC23346.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.


ensembl_gene_id: SAMN02746041_01704
symbol: dnaX
gene_biotype: protein_coding
description:
  DNA polymerase III, tau subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: SAMN02746041_01709
symbol: fusA
gene_biotype: protein_coding
description:
  Translation elongation factor 2 (EF-2/EF-G); Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. [...]


ensembl_gene_id: SAMN02746041_01713
symbol: queF
gene_biotype: protein_coding
description:
  7-cyano-7-deazaguanine reductase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1). Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily.


ensembl_gene_id: SAMN02746041_01719
symbol: dnaJ
gene_biotype: protein_coding
description:
  Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...]


ensembl_gene_id: SAMN02746041_01721
symbol: rpoZ
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.


ensembl_gene_id: SAMN02746041_01729
symbol: mraY
gene_biotype: protein_coding
description:
  Phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.


ensembl_gene_id: SAMN02746041_01730
symbol: murG
gene_biotype: protein_coding
description:
  Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.


ensembl_gene_id: SAMN02746041_01732
symbol: purE
gene_biotype: protein_coding
description:
  5-(carboxyamino)imidazole ribonucleotide mutase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).


ensembl_gene_id: SAMN02746041_01736
symbol: SMC23492.1
gene_biotype: protein_coding
description:
  5,10-methylenetetrahydrofolate reductase (ferredoxin); Belongs to the methylenetetrahydrofolate reductase family.


ensembl_gene_id: SAMN02746041_01748
symbol: folD
gene_biotype: protein_coding
description:
  Methylenetetrahydrofolate dehydrogenase (NADP+); Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.


ensembl_gene_id: SAMN02746041_01750
symbol: SMC23540.1
gene_biotype: protein_coding
description:
  DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]


ensembl_gene_id: SAMN02746041_01751
symbol: gyrB
gene_biotype: protein_coding
description:
  DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: SAMN02746041_01752
symbol: gyrA
gene_biotype: protein_coding
description:
  DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: SAMN02746041_01753
symbol: gpsA
gene_biotype: protein_coding
description:
  Glycerol 3-phosphate dehydrogenase (NAD(P)+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: SAMN02746041_01756
symbol: SMC23549.1
gene_biotype: protein_coding
description:
  Phosphatidylglycerophosphatase A; Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG).


ensembl_gene_id: SAMN02746041_01761
symbol: SMC23556.1
gene_biotype: protein_coding
description:
  Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the BPG-independent phosphoglycerate mutase family.


ensembl_gene_id: SAMN02746041_01763
symbol: rnpA
gene_biotype: protein_coding
description:
  Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.


ensembl_gene_id: SAMN02746041_01764
symbol: SMC23559.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.


ensembl_gene_id: SAMN02746041_01765
symbol: yidC
gene_biotype: protein_coding
description:
  Protein translocase subunit yidC; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins.


ensembl_gene_id: SAMN02746041_01767
symbol: mnmE
gene_biotype: protein_coding
description:
  tRNA modification GTPase trmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.


ensembl_gene_id: SAMN02746041_01769
symbol: SMC23573.1
gene_biotype: protein_coding
description:
  Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family.


ensembl_gene_id: SAMN02746041_01774
symbol: SMC23583.1
gene_biotype: protein_coding
description:
  Adenosylcobinamide kinase; Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate.


ensembl_gene_id: SAMN02746041_01775
symbol: cobS
gene_biotype: protein_coding
description:
  Cobalamin-5'-phosphate synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.


ensembl_gene_id: SAMN02746041_01776
symbol: birA
gene_biotype: protein_coding
description:
  Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.


ensembl_gene_id: SAMN02746041_01777
symbol: dksA
gene_biotype: protein_coding
description:
  Transcriptional regulator, TraR/DksA family; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters.


ensembl_gene_id: SAMN02746041_01778
symbol: moaC
gene_biotype: protein_coding
description:
  Cyclic pyranopterin monophosphate synthase subunit MoaC; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family.


ensembl_gene_id: SAMN02746041_01781
symbol: phnC
gene_biotype: protein_coding
description:
  Phosphonate transport system ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.


ensembl_gene_id: SAMN02746041_01788
symbol: SMC23644.1
gene_biotype: protein_coding
description:
  Carbon-phosphorous lyase; Catalyzes the breakage of the C-P bond in alpha-D-ribose 1- methylphosphonate 5-phosphate (PRPn) forming alpha-D-ribose. Belongs to the PhnJ family.


ensembl_gene_id: SAMN02746041_01792
symbol: SMC23651.1
gene_biotype: protein_coding
description:
  Protein tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.


ensembl_gene_id: SAMN02746041_01803
symbol: bioB
gene_biotype: protein_coding
description:
  Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.


ensembl_gene_id: SAMN02746041_01879
symbol: fdhD
gene_biotype: protein_coding
description:
  FdhD protein; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.


ensembl_gene_id: SAMN02746041_01883
symbol: SMC23960.1
gene_biotype: protein_coding
description:
  Molybdenum cofactor synthesis domain-containing protein; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.


ensembl_gene_id: SAMN02746041_01895
symbol: prs
gene_biotype: protein_coding
description:
  Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.


ensembl_gene_id: SAMN02746041_01902
symbol: rpoD
gene_biotype: protein_coding
description:
  RNA polymerase, sigma 70 subunit, RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.


ensembl_gene_id: SAMN02746041_01903
symbol: dnaG
gene_biotype: protein_coding
description:
  DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.


ensembl_gene_id: SAMN02746041_01905
symbol: hisA
gene_biotype: protein_coding
description:
  1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase.


ensembl_gene_id: SAMN02746041_01925
symbol: ilvC
gene_biotype: protein_coding
description:
  Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate.


ensembl_gene_id: SAMN02746041_01926
symbol: psd
gene_biotype: protein_coding
description:
  Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).


ensembl_gene_id: SAMN02746041_01927
symbol: SMC24079.1
gene_biotype: protein_coding
description:
  CDP-diacylglycerol--serine O-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: SAMN02746041_01928
symbol: leuC-2
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydratase, large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.


ensembl_gene_id: SAMN02746041_01929
symbol: leuD
gene_biotype: protein_coding
description:
  3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 2 subfamily.


ensembl_gene_id: SAMN02746041_01930
symbol: asd
gene_biotype: protein_coding
description:
  Aspartate semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.


ensembl_gene_id: SAMN02746041_01932
symbol: coaD
gene_biotype: protein_coding
description:
  Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.


ensembl_gene_id: SAMN02746041_01944
symbol: SMC24115.1
gene_biotype: protein_coding
description:
  D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family.


ensembl_gene_id: SAMN02746041_01946
symbol: speH
gene_biotype: protein_coding
description:
  S-adenosylmethionine decarboxylase; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the prokaryotic AdoMetDC family. Type 1 subfamily.


ensembl_gene_id: SAMN02746041_01947
symbol: speE
gene_biotype: protein_coding
description:
  Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.


ensembl_gene_id: SAMN02746041_01951
symbol: miaA
gene_biotype: protein_coding
description:
  tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.


ensembl_gene_id: SAMN02746041_01952
symbol: mutL
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.


ensembl_gene_id: SAMN02746041_01953
symbol: SMC24144.1
gene_biotype: protein_coding
description:
  GGDEF domain-containing protein, diguanylate cyclase (c-di-GMP synthetase) or its enzymatically inactive variants.


ensembl_gene_id: SAMN02746041_01962
symbol: moaA
gene_biotype: protein_coding
description:
  Cyclic pyranopterin monophosphate synthase subunit MoaA; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.


ensembl_gene_id: SAMN02746041_01964
symbol: tsaD
gene_biotype: protein_coding
description:
  O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.


ensembl_gene_id: SAMN02746041_01965
symbol: rsmA
gene_biotype: protein_coding
description:
  Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.


ensembl_gene_id: SAMN02746041_01971
symbol: panC
gene_biotype: protein_coding
description:
  Pantothenate synthetase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.


ensembl_gene_id: SAMN02746041_01972
symbol: panD
gene_biotype: protein_coding
description:
  L-aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.


ensembl_gene_id: SAMN02746041_01989
symbol: polA
gene_biotype: protein_coding
description:
  DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.


ensembl_gene_id: SAMN02746041_01990
symbol: queC
gene_biotype: protein_coding
description:
  preQ(0) biosynthesis protein QueC; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Belongs to the QueC family.


ensembl_gene_id: SAMN02746041_01992
symbol: corA
gene_biotype: protein_coding
description:
  Magnesium transporter; Mediates influx of magnesium ions. Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.


ensembl_gene_id: SAMN02746041_02016
symbol: rex
gene_biotype: protein_coding
description:
  Redox-sensing transcriptional repressor; Modulates transcription in response to changes in cellular NADH/NAD(+) redox state.


ensembl_gene_id: SAMN02746041_02018
symbol: pdxA
gene_biotype: protein_coding
description:
  4-hydroxythreonine-4-phosphate dehydrogenase; Catalyzes the NAD(P)-dependent oxidation of 4-(phosphooxy)-L- threonine (HTP) into 2-amino-3-oxo-4-(phosphooxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP).


ensembl_gene_id: SAMN02746041_02019
symbol: SMC24504.1
gene_biotype: protein_coding
description:
  Quinolinate synthetase; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.


ensembl_gene_id: SAMN02746041_02020
symbol: SMC24507.1
gene_biotype: protein_coding
description:
  Outer membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).


ensembl_gene_id: SAMN02746041_02022
symbol: rnj
gene_biotype: protein_coding
description:
  Ribonuclease J; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay.


ensembl_gene_id: SAMN02746041_02023
symbol: SMC24514.1
gene_biotype: protein_coding
description:
  1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.


ensembl_gene_id: SAMN02746041_02024
symbol: SMC24516.1
gene_biotype: protein_coding
description:
  Single-strand binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.


ensembl_gene_id: SAMN02746041_02025
symbol: tatA-2
gene_biotype: protein_coding
description:
  Sec-independent protein translocase protein TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.


ensembl_gene_id: SAMN02746041_02027
symbol: hemA
gene_biotype: protein_coding
description:
  glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).


ensembl_gene_id: SAMN02746041_02031
symbol: rimO
gene_biotype: protein_coding
description:
  SSU ribosomal protein S12P methylthiotransferase; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.


ensembl_gene_id: SAMN02746041_02082
symbol: glgB
gene_biotype: protein_coding
description:
  Glycogen branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.


ensembl_gene_id: SAMN02746041_02084
symbol: ackA
gene_biotype: protein_coding
description:
  Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.


ensembl_gene_id: SAMN02746041_02092
symbol: mqnE
gene_biotype: protein_coding
description:
  Aminodeoxyfutalosine synthase; Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3-[(1-carboxyvinyl)oxy]benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate.


ensembl_gene_id: SAMN02746041_02093
symbol: mqnC
gene_biotype: protein_coding
description:
  De-hypoxanthine futalosine cyclase; Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2).


ensembl_gene_id: SAMN02746041_02095
symbol: mqnA
gene_biotype: protein_coding
description:
  Chorismate dehydratase; Catalyzes the dehydration of chorismate into 3-[(1- carboxyvinyl)oxy]benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2).


ensembl_gene_id: SAMN02746041_02097
symbol: ubiX
gene_biotype: protein_coding
description:
  4-hydroxy-3-polyprenylbenzoate decarboxylase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.


ensembl_gene_id: SAMN02746041_02103
symbol: SMC24829.1
gene_biotype: protein_coding
description:
  Molybdopterin molybdotransferase; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.


ensembl_gene_id: SAMN02746041_02104
symbol: mobA
gene_biotype: protein_coding
description:
  Molybdenum cofactor guanylyltransferase; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor; Belongs to the MobA family.


ensembl_gene_id: SAMN02746041_02108
symbol: lgt
gene_biotype: protein_coding
description:
  Phosphatidylglycerol:prolipoprotein diacylglycerol transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.


ensembl_gene_id: SAMN02746041_02114
symbol: SMC24855.1
gene_biotype: protein_coding
description:
  Cell division transport system permease protein; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.


ensembl_gene_id: SAMN02746041_02131
symbol: greA
gene_biotype: protein_coding
description:
  Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.


ensembl_gene_id: SAMN02746041_02132
symbol: pyrB
gene_biotype: protein_coding
description:
  Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.


ensembl_gene_id: SAMN02746041_02133
symbol: pyrC
gene_biotype: protein_coding
description:
  Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.


ensembl_gene_id: SAMN02746041_02139
symbol: SMC24898.1
gene_biotype: protein_coding
description:
  RNA polymerase sigma-32 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: SAMN02746041_02140
symbol: hisC
gene_biotype: protein_coding
description:
  Histidinol phosphate aminotransferase apoenzyme; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.


ensembl_gene_id: SAMN02746041_02142
symbol: SMC24905.1
gene_biotype: protein_coding
description:
  SSU ribosomal protein S1P; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence.


ensembl_gene_id: SAMN02746041_02146
symbol: guaB
gene_biotype: protein_coding
description:
  Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.


ensembl_gene_id: SAMN02746041_02152
symbol: mutS
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.


ensembl_gene_id: SAMN02746041_02155
symbol: prfB
gene_biotype: protein_coding
description:
  Bacterial peptide chain release factor 2 (bRF-2); Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.


ensembl_gene_id: SAMN02746041_02156
symbol: lnt
gene_biotype: protein_coding
description:
  Apolipoprotein N-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily.


ensembl_gene_id: SAMN02746041_02159
symbol: SMC24946.1
gene_biotype: protein_coding
description:
  S-adenosylmethionine decarboxylase; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine.


ensembl_gene_id: SAMN02746041_02162
symbol: nadK
gene_biotype: protein_coding
description:
  NAD+ kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.


ensembl_gene_id: SAMN02746041_02167
symbol: upp
gene_biotype: protein_coding
description:
  Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.


ensembl_gene_id: SAMN02746041_02173
symbol: lepA
gene_biotype: protein_coding
description:
  GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.


ensembl_gene_id: SAMN02746041_02174
symbol: SMC24985.1
gene_biotype: protein_coding
description:
  Oxygen-independent coproporphyrinogen-3 oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: SAMN02746041_02183
symbol: SMC25016.1
gene_biotype: protein_coding
description:
  Multidrug efflux pump subunit AcrB; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: SAMN02746041_02189
symbol: ispH
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.


ensembl_gene_id: SAMN02746041_02190
symbol: SMC25031.1
gene_biotype: protein_coding
description:
  tRNA-U20-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.


ensembl_gene_id: SAMN02746041_02210
symbol: der
gene_biotype: protein_coding
description:
  GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.


ensembl_gene_id: SAMN02746041_02214
symbol: dxr
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family.


ensembl_gene_id: SAMN02746041_02216
symbol: SMC25144.1
gene_biotype: protein_coding
description:
  Undecaprenyl pyrophosphate synthetase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.


ensembl_gene_id: SAMN02746041_02217
symbol: frr
gene_biotype: protein_coding
description:
  Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.


ensembl_gene_id: SAMN02746041_02219
symbol: tsf
gene_biotype: protein_coding
description:
  Translation elongation factor Ts (EF-Ts); Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.


ensembl_gene_id: SAMN02746041_02221
symbol: cysQ
gene_biotype: protein_coding
description:
  3'(2'),5'-bisphosphate nucleotidase; Converts adenosine-3',5'-bisphosphate (PAP) to AMP. Belongs to the inositol monophosphatase superfamily. CysQ family.


ensembl_gene_id: SAMN02746041_02222
symbol: trpB
gene_biotype: protein_coding
description:
  Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.


ensembl_gene_id: SAMN02746041_02229
symbol: prmA
gene_biotype: protein_coding
description:
  [LSU ribosomal protein L11P]-lysine N-methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family.


ensembl_gene_id: SAMN02746041_02230
symbol: kdsB
gene_biotype: protein_coding
description:
  3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase); Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria.


ensembl_gene_id: SAMN02746041_02233
symbol: purF
gene_biotype: protein_coding
description:
  Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.


ensembl_gene_id: SAMN02746041_02240
symbol: SMC25199.1
gene_biotype: protein_coding
description:
  Integration host factor subunit alpha; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family.


ensembl_gene_id: SAMN02746041_02245
symbol: dnaA
gene_biotype: protein_coding
description:
  Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.


ensembl_gene_id: SAMN02746041_02247
symbol: ddl
gene_biotype: protein_coding
description:
  D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.


ensembl_gene_id: SAMN02746041_02251
symbol: SMC25215.1
gene_biotype: protein_coding
description:
  16S rRNA (uracil1498-N3)-methyltransferase; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.


ensembl_gene_id: SAMN02746041_02252
symbol: SMC25216.1
gene_biotype: protein_coding
description:
  Type 4 prepilin peptidase 1 Aspartic peptidase. MEROPS family A24A; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.


ensembl_gene_id: SAMN02746041_02253
symbol: topA
gene_biotype: protein_coding
description:
  DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]


ensembl_gene_id: SAMN02746041_02260
symbol: nuoN-2
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family.


ensembl_gene_id: SAMN02746041_02266
symbol: nuoH-2
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit H; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone.


ensembl_gene_id: SAMN02746041_02270
symbol: SMC25257.1
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit A; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain.


ensembl_gene_id: SAMN02746041_02276
symbol: proC
gene_biotype: protein_coding
description:
  Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.


ensembl_gene_id: SAMN02746041_02292
symbol: pxpA
gene_biotype: protein_coding
description:
  UPF0271 protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.


ensembl_gene_id: SAMN02746041_02300
symbol: lexA
gene_biotype: protein_coding
description:
  Repressor LexA; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair.


ensembl_gene_id: SAMN02746041_02303
symbol: SMC25358.1
gene_biotype: protein_coding
description:
  2-oxoglutarate dehydrogenase E2 component; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2).


ensembl_gene_id: SAMN02746041_02308
symbol: clpB
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease ATP-binding subunit ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.


ensembl_gene_id: SAMN02746041_02321
symbol: SMC25405.1
gene_biotype: protein_coding
description:
  methylated-DNA-[protein]-cysteine S-methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated.


ensembl_gene_id: SAMN02746041_02327
symbol: cobD
gene_biotype: protein_coding
description:
  Adenosylcobinamide-phosphate synthase; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.


ensembl_gene_id: SAMN02746041_02328
symbol: cobQ
gene_biotype: protein_coding
description:
  Adenosylcobyric acid synthase (glutamine-hydrolysing); Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.


ensembl_gene_id: SAMN02746041_02330
symbol: cbiA-2
gene_biotype: protein_coding
description:
  Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.


ensembl_gene_id: SAMN02746041_02357
symbol: SMC25521.1
gene_biotype: protein_coding
description:
  Membrane fusion protein, multidrug efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: SAMN02746041_02365
symbol: fur-3
gene_biotype: protein_coding
description:
  Fur family transcriptional regulator, peroxide stress response regulator; Belongs to the Fur family.


ensembl_gene_id: SAMN02746041_02366
symbol: katG
gene_biotype: protein_coding
description:
  Catalase-peroxidase; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily.


ensembl_gene_id: SAMN02746041_02382
symbol: aroQ
gene_biotype: protein_coding
description:
  3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.


ensembl_gene_id: SAMN02746041_02413
symbol: SMC25689.1
gene_biotype: protein_coding
description:
  Heavy metal efflux pump, CzcA family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: SAMN02746041_02427
symbol: trmJ
gene_biotype: protein_coding
description:
  tRNA/rRNA methyltransferase; Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA.


ensembl_gene_id: SAMN02746041_02432
symbol: rsmI
gene_biotype: protein_coding
description:
  16S rRNA (cytidine1402-2'-O)-methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.


ensembl_gene_id: SAMN02746041_02435
symbol: rplS
gene_biotype: protein_coding
description:
  LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.


ensembl_gene_id: SAMN02746041_02437
symbol: trmD
gene_biotype: protein_coding
description:
  tRNA (Guanine37-N(1)-) methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.


ensembl_gene_id: SAMN02746041_02438
symbol: rimM
gene_biotype: protein_coding
description:
  16S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.


ensembl_gene_id: SAMN02746041_02441
symbol: ffh
gene_biotype: protein_coding
description:
  Signal recognition particle subunit FFH/SRP54 (srp54); Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the i [...]


ensembl_gene_id: SAMN02746041_02447
symbol: dinB
gene_biotype: protein_coding
description:
  DNA polymerase-4; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.


ensembl_gene_id: SAMN02746041_02459
symbol: SMC25868.1
gene_biotype: protein_coding
description:
  Na+-transporting NADH:ubiquinone oxidoreductase subunit B; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family.


ensembl_gene_id: SAMN02746041_02500
symbol: glpK
gene_biotype: protein_coding
description:
  Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.


ensembl_gene_id: SAMN02746041_02502
symbol: SMC26025.1
gene_biotype: protein_coding
description:
  Glycerol 3-phosphate dehydrogenase (quinone) subunit A; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: SAMN02746041_02516
symbol: surE
gene_biotype: protein_coding
description:
  5'-nucleotidase /3'-nucleotidase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.


ensembl_gene_id: SAMN02746041_02525
symbol: SMC26085.1
gene_biotype: protein_coding
description:
  Succinate dehydrogenase subunit A; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.


ensembl_gene_id: SAMN02746041_02536
symbol: rpoA
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: SAMN02746041_02537
symbol: rpsD
gene_biotype: protein_coding
description:
  SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.


ensembl_gene_id: SAMN02746041_02538
symbol: rpsK
gene_biotype: protein_coding
description:
  SSU ribosomal protein S11P; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.


ensembl_gene_id: SAMN02746041_02539
symbol: rpsM
gene_biotype: protein_coding
description:
  SSU ribosomal protein S13P; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.


ensembl_gene_id: SAMN02746041_02540
symbol: infA
gene_biotype: protein_coding
description:
  Bacterial translation initiation factor 1 (bIF-1); One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.


ensembl_gene_id: SAMN02746041_02541
symbol: map
gene_biotype: protein_coding
description:
  Methionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.


ensembl_gene_id: SAMN02746041_02542
symbol: adk
gene_biotype: protein_coding
description:
  Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.


ensembl_gene_id: SAMN02746041_02543
symbol: secY
gene_biotype: protein_coding
description:
  Protein translocase subunit secY/sec61 alpha; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.


ensembl_gene_id: SAMN02746041_02544
symbol: rplO
gene_biotype: protein_coding
description:
  LSU ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.


ensembl_gene_id: SAMN02746041_02546
symbol: rpsE
gene_biotype: protein_coding
description:
  SSU ribosomal protein S5P; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.


ensembl_gene_id: SAMN02746041_02547
symbol: rplR
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.


ensembl_gene_id: SAMN02746041_02548
symbol: rplF
gene_biotype: protein_coding
description:
  LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.


ensembl_gene_id: SAMN02746041_02549
symbol: rpsH
gene_biotype: protein_coding
description:
  SSU ribosomal protein S8P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.


ensembl_gene_id: SAMN02746041_02550
symbol: rpsZ
gene_biotype: protein_coding
description:
  SSU ribosomal protein S14P; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.


ensembl_gene_id: SAMN02746041_02551
symbol: rplE
gene_biotype: protein_coding
description:
  LSU ribosomal protein L5P; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.


ensembl_gene_id: SAMN02746041_02552
symbol: rplX
gene_biotype: protein_coding
description:
  LSU ribosomal protein L24P; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.


ensembl_gene_id: SAMN02746041_02553
symbol: rplN
gene_biotype: protein_coding
description:
  LSU ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.


ensembl_gene_id: SAMN02746041_02554
symbol: rpsQ
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.


ensembl_gene_id: SAMN02746041_02556
symbol: rplP
gene_biotype: protein_coding
description:
  LSU ribosomal protein L16P; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.


ensembl_gene_id: SAMN02746041_02557
symbol: rpsC
gene_biotype: protein_coding
description:
  SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.


ensembl_gene_id: SAMN02746041_02558
symbol: rplV
gene_biotype: protein_coding
description:
  LSU ribosomal protein L22P; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.


ensembl_gene_id: SAMN02746041_02559
symbol: rpsS
gene_biotype: protein_coding
description:
  SSU ribosomal protein S19P; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.


ensembl_gene_id: SAMN02746041_02560
symbol: rplB
gene_biotype: protein_coding
description:
  LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.


ensembl_gene_id: SAMN02746041_02561
symbol: rplW
gene_biotype: protein_coding
description:
  LSU ribosomal protein L23P; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.


ensembl_gene_id: SAMN02746041_02563
symbol: rplC
gene_biotype: protein_coding
description:
  LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.


ensembl_gene_id: SAMN02746041_02564
symbol: rpsJ
gene_biotype: protein_coding
description:
  SSU ribosomal protein S10P; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.


ensembl_gene_id: SAMN02746041_02566
symbol: sucD
gene_biotype: protein_coding
description:
  succinyl-CoA synthetase (ADP-forming) alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.


ensembl_gene_id: SAMN02746041_02567
symbol: sucC
gene_biotype: protein_coding
description:
  succinyl-CoA synthetase (ADP-forming) beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.


ensembl_gene_id: SAMN02746041_02568
symbol: gatB
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily.


ensembl_gene_id: SAMN02746041_02569
symbol: mtnA
gene_biotype: protein_coding
description:
  Methylthioribose-1-phosphate isomerase; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P).


ensembl_gene_id: SAMN02746041_02570
symbol: radA
gene_biotype: protein_coding
description:
  DNA repair protein RadA/Sms; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.


ensembl_gene_id: SAMN02746041_02573
symbol: bamD
gene_biotype: protein_coding
description:
  Beta-barrel assembly machine subunit BamD; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.


ensembl_gene_id: SAMN02746041_02574
symbol: rho
gene_biotype: protein_coding
description:
  Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.


ensembl_gene_id: SAMN02746041_02577
symbol: prfA
gene_biotype: protein_coding
description:
  Bacterial peptide chain release factor 1 (bRF-1); Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.


ensembl_gene_id: SAMN02746041_02578
symbol: prmC
gene_biotype: protein_coding
description:
  [protein release factor]-glutamine N5-methyltransferase; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.


ensembl_gene_id: SAMN02746041_02579
symbol: murA
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.


ensembl_gene_id: SAMN02746041_02622
symbol: SMC26402.1
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing); Belongs to the UDP-N-acetylglucosamine 2-epimerase family.


ensembl_gene_id: SAMN02746041_02629
symbol: SMC26409.1
gene_biotype: protein_coding
description:
  Sugar transferase, PEP-CTERM system associated/exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.


ensembl_gene_id: SAMN02746041_02654
symbol: SMC26506.1
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase.


ensembl_gene_id: SAMN02746041_02656
symbol: SMC26515.1
gene_biotype: protein_coding
description:
  NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC.


ensembl_gene_id: SAMN02746041_02661
symbol: hflX
gene_biotype: protein_coding
description:
  GTP-binding protein HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis.


ensembl_gene_id: SAMN02746041_02663
symbol: SMC26541.1
gene_biotype: protein_coding
description:
  Primary replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily.


ensembl_gene_id: SAMN02746041_02666
symbol: rpsR
gene_biotype: protein_coding
description:
  SSU ribosomal protein S18P; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.


ensembl_gene_id: SAMN02746041_02677
symbol: SMC26594.1
gene_biotype: protein_coding
description:
  Phosphate ABC transporter membrane protein 1, PhoT family (TC 3.A.1.7.1); Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: SAMN02746041_02680
symbol: pstB
gene_biotype: protein_coding
description:
  Phosphate transport system ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.


ensembl_gene_id: SAMN02746041_02690
symbol: pyrG
gene_biotype: protein_coding
description:
  CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.


ensembl_gene_id: SAMN02746041_02698
symbol: SMC26632.1
gene_biotype: protein_coding
description:
  RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: SAMN02746041_02699
symbol: hpf
gene_biotype: protein_coding
description:
  SSU ribosomal protein S30P/sigma 54 modulation protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.


ensembl_gene_id: SAMN02746041_02705
symbol: SMC26639.1
gene_biotype: protein_coding
description:
  Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: SAMN02746041_02706
symbol: SMC26640.1
gene_biotype: protein_coding
description:
  Glyceraldehyde-3-phosphate dehydrogenase (NAD+); Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: SAMN02746041_02708
symbol: tpiA
gene_biotype: protein_coding
description:
  Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.


ensembl_gene_id: SAMN02746041_02709
symbol: SMC26643.1
gene_biotype: protein_coding
description:
  Protein translocase subunit secG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.


ensembl_gene_id: SAMN02746041_02756
symbol: SMC26766.1
gene_biotype: protein_coding
description:
  GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.


ensembl_gene_id: SAMN02746041_02757
symbol: ispG
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family.


ensembl_gene_id: SAMN02746041_02763
symbol: trpA
gene_biotype: protein_coding
description:
  Tryptophan synthase, alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.


ensembl_gene_id: SAMN02746041_02764
symbol: trpB-2
gene_biotype: protein_coding
description:
  Tryptophan synthase, beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.


ensembl_gene_id: SAMN02746041_02767
symbol: trpD
gene_biotype: protein_coding
description:
  Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).


ensembl_gene_id: SAMN02746041_02772
symbol: recD2
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease V alpha subunit; DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity; Belongs to the RecD family. RecD-like subfamily.


ensembl_gene_id: SAMN02746041_02779
symbol: pyrF
gene_biotype: protein_coding
description:
  Orotidine-5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily.


ensembl_gene_id: SAMN02746041_02800
symbol: SMC26895.1
gene_biotype: protein_coding
description:
  23S rRNA (guanosine2251-2'-O)-methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: SAMN02746041_02801
symbol: SMC26896.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.


ensembl_gene_id: SAMN02746041_02802
symbol: SMC26897.1
gene_biotype: protein_coding
description:
  Septum formation protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.


ensembl_gene_id: SAMN02746041_02805
symbol: SMC26903.1
gene_biotype: protein_coding
description:
  Ribonucleoside-diphosphate reductase class II; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen.


ensembl_gene_id: SAMN02746041_02806
symbol: nfi
gene_biotype: protein_coding
description:
  Endonuclease V; DNA repair enzyme involved in the repair of deaminated bases. Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA.


ensembl_gene_id: SAMN02746041_02853
symbol: SMC27029.1
gene_biotype: protein_coding
description:
  Putative TIM-barrel protein, nifR3 family; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.


ensembl_gene_id: SAMN02746041_02857
symbol: SMC27044.1
gene_biotype: protein_coding
description:
  Amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-); Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: SAMN02746041_02867
symbol: SMC27124.1
gene_biotype: protein_coding
description:
  Amino acid ABC transporter substrate-binding protein, PAAT family; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: SAMN02746041_02878
symbol: glnD
gene_biotype: protein_coding
description:
  [protein-PII] uridylyltransferase; Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen metabolism.


ensembl_gene_id: SAMN02746041_02881
symbol: SMC27152.1
gene_biotype: protein_coding
description:
  UDP-N-acetyl-D-glucosamine dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.


ensembl_gene_id: SAMN02746041_02886
symbol: SMC27157.1
gene_biotype: protein_coding
description:
  dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.


ensembl_gene_id: SAMN02746041_02891
symbol: SMC27165.1
gene_biotype: protein_coding
description:
  Putative ABC transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: SAMN02746041_02904
symbol: SMC27214.1
gene_biotype: protein_coding
description:
  3-deoxy-D-manno-octulosonic-acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family.


ensembl_gene_id: SAMN02746041_02923
symbol: rnfB
gene_biotype: protein_coding
description:
  Electron transport complex, RnfABCDGE type, B subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.


ensembl_gene_id: SAMN02746041_02924
symbol: rnfA-2
gene_biotype: protein_coding
description:
  Electron transport complex protein RnfA; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.


ensembl_gene_id: SAMN02746041_02925
symbol: rnfE
gene_biotype: protein_coding
description:
  Electron transport complex protein RnfE; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.


ensembl_gene_id: SAMN02746041_02926
symbol: rnfG
gene_biotype: protein_coding
description:
  Electron transport complex protein RnfG; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the RnfG family.


ensembl_gene_id: SAMN02746041_02927
symbol: rnfD
gene_biotype: protein_coding
description:
  Electron transport complex protein RnfD; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family.


ensembl_gene_id: SAMN02746041_02949
symbol: SMC27386.1
gene_biotype: protein_coding
description:
  L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family.  In the N-terminal section; belongs to the proline dehydrogenase family.


ensembl_gene_id: SAMN02746041_02973
symbol: SMC27483.1
gene_biotype: protein_coding
description:
  Nucleoside ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: SAMN02746041_02977
symbol: lpxK
gene_biotype: protein_coding
description:
  lipid-A-disaccharide kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).


ensembl_gene_id: SAMN02746041_02993
symbol: purN
gene_biotype: protein_coding
description:
  Formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.


ensembl_gene_id: SAMN02746041_02995
symbol: purL
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase subunit II; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to [...]


ensembl_gene_id: SAMN02746041_02996
symbol: mntP
gene_biotype: protein_coding
description:
  Putative Mn2+ efflux pump MntP; Probably functions as a manganese efflux pump. Belongs to the MntP (TC 9.B.29) family.


ensembl_gene_id: SAMN02746041_02998
symbol: pheT
gene_biotype: protein_coding
description:
  phenylalanyl-tRNA synthetase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.


ensembl_gene_id: SAMN02746041_02999
symbol: pheS
gene_biotype: protein_coding
description:
  phenylalanyl-tRNA synthetase, alpha subunit; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.


ensembl_gene_id: SAMN02746041_03000
symbol: rplT
gene_biotype: protein_coding
description:
  LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.


ensembl_gene_id: SAMN02746041_03002
symbol: infC
gene_biotype: protein_coding
description:
  Bacterial translation initiation factor 3 (bIF-3); IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.


ensembl_gene_id: SAMN02746041_03008
symbol: miaB
gene_biotype: protein_coding
description:
  tRNA-i(6)A37 thiotransferase enzyme MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.


ensembl_gene_id: SAMN02746041_03010
symbol: ade
gene_biotype: protein_coding
description:
  Adenine deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family.


ensembl_gene_id: SAMN02746041_03037
symbol: thiE
gene_biotype: protein_coding
description:
  Thiamine-phosphate diphosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.


ensembl_gene_id: SAMN02746041_03038
symbol: thiL
gene_biotype: protein_coding
description:
  Thiamine-monophosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family.


ensembl_gene_id: SAMN02746041_03047
symbol: hemC
gene_biotype: protein_coding
description:
  Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.


ensembl_gene_id: SAMN02746041_03054
symbol: nadE-2
gene_biotype: protein_coding
description:
  NH(3)-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.


ensembl_gene_id: SAMN02746041_03056
symbol: glnD-2
gene_biotype: protein_coding
description:
  UTP--GlnB (protein PII) uridylyltransferase, GlnD; Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen metabolism.


ensembl_gene_id: SAMN02746041_03058
symbol: SMC27747.1
gene_biotype: protein_coding
description:
  Glutamate-ammonia-ligase adenylyltransferase; Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transd [...]


ensembl_gene_id: SAMN02746041_03068
symbol: SMC27793.1
gene_biotype: protein_coding
description:
  Dihydrofolate synthase / folylpolyglutamate synthase; Belongs to the folylpolyglutamate synthase family.


ensembl_gene_id: SAMN02746041_03069
symbol: lptD
gene_biotype: protein_coding
description:
  LPS-assembly protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.


ensembl_gene_id: SAMN02746041_03071
symbol: leuB
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.


ensembl_gene_id: SAMN02746041_03077
symbol: SMC27802.1
gene_biotype: protein_coding
description:
  Molecular chaperone GrpE (heat shock protein); Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle.  [...]


ensembl_gene_id: SAMN02746041_03086
symbol: lolD
gene_biotype: protein_coding
description:
  Lipoprotein-releasing system ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.


ensembl_gene_id: SAMN02746041_03087
symbol: bamA
gene_biotype: protein_coding
description:
  Beta-barrel assembly machine subunit BamA; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.


ensembl_gene_id: SAMN02746041_03089
symbol: lpxD
gene_biotype: protein_coding
description:
  UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily.


ensembl_gene_id: SAMN02746041_03090
symbol: fabZ
gene_biotype: protein_coding
description:
  3-hydroxyacyl-[acyl-carrier-protein] dehydratase; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.


ensembl_gene_id: SAMN02746041_03091
symbol: lpxA
gene_biotype: protein_coding
description:
  acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: SAMN02746041_03093
symbol: lpxB
gene_biotype: protein_coding
description:
  lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: SAMN02746041_03094
symbol: msbA
gene_biotype: protein_coding
description:
  ATP-binding cassette, subfamily B, MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation.


ensembl_gene_id: SAMN02746041_03098
symbol: SMC27822.1
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate--protein phosphotransferase; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr).


ensembl_gene_id: SAMN02746041_03099
symbol: smpB
gene_biotype: protein_coding
description:
  SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...]


ensembl_gene_id: SAMN02746041_03109
symbol: gcvH
gene_biotype: protein_coding
description:
  Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.


ensembl_gene_id: SAMN02746041_03110
symbol: gcvPA
gene_biotype: protein_coding
description:
  Glycine dehydrogenase (decarboxylating) alpha subunit; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein.


ensembl_gene_id: SAMN02746041_03112
symbol: lipB
gene_biotype: protein_coding
description:
  Lipoyl(octanoyl) transferase; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate.


ensembl_gene_id: SAMN02746041_03113
symbol: lipA
gene_biotype: protein_coding
description:
  Lipoic acid synthetase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.


ensembl_gene_id: SAMN02746041_03121
symbol: SMC27929.1
gene_biotype: protein_coding
description:
  AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase.


ensembl_gene_id: SAMN02746041_03123
symbol: cas2
gene_biotype: protein_coding
description:
  CRISPR-associated protein, Cas2 family; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.


ensembl_gene_id: SAMN02746041_03124
symbol: cas1
gene_biotype: protein_coding
description:
  CRISPR-associated protein, Cas1 family/CRISPR-associated exonuclease, Cas4 family; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.


ensembl_gene_id: SAMN02746041_03136
symbol: tyrS
gene_biotype: protein_coding
description:
  tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily.


ensembl_gene_id: SAMN02746041_03139
symbol: glmS
gene_biotype: protein_coding
description:
  Glutamine--fructose-6-phosphate transaminase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.


ensembl_gene_id: SAMN02746041_03140
symbol: atpC
gene_biotype: protein_coding
description:
  ATP synthase F1 subcomplex epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.


ensembl_gene_id: SAMN02746041_03141
symbol: atpD
gene_biotype: protein_coding
description:
  ATP synthase F1 subcomplex beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.


ensembl_gene_id: SAMN02746041_03142
symbol: atpG
gene_biotype: protein_coding
description:
  ATP synthase F1 subcomplex gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.


ensembl_gene_id: SAMN02746041_03143
symbol: atpA
gene_biotype: protein_coding
description:
  ATP synthase F1 subcomplex alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.


ensembl_gene_id: SAMN02746041_03144
symbol: atpH
gene_biotype: protein_coding
description:
  F-type H+-transporting ATPase subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: SAMN02746041_03145
symbol: atpF-3
gene_biotype: protein_coding
description:
  F-type H+-transporting ATPase subunit b; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.


ensembl_gene_id: SAMN02746041_03147
symbol: mrdB
gene_biotype: protein_coding
description:
  Cell elongation-specific peptidoglycan biosynthesis regulator RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.


ensembl_gene_id: SAMN02746041_03153
symbol: thi4
gene_biotype: protein_coding
description:
  Thiazole-adenylate synthase; Involved in the biosynthesis of the thiazole moiety of thiamine. Catalyzes the conversion of NAD and glycine to adenosine diphosphate 5-(2-hydroxyethyl)-4-methylthiazole-2-carboxylate (ADT), an adenylated thiazole intermediate, using free sulfide as a source of sulfur.


ensembl_gene_id: SAMN02746041_03198
symbol: rpsG
gene_biotype: protein_coding
description:
  SSU ribosomal protein S7P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.


ensembl_gene_id: SAMN02746041_03199
symbol: rpsL
gene_biotype: protein_coding
description:
  SSU ribosomal protein S12P; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.


ensembl_gene_id: SAMN02746041_03200
symbol: rpoC
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: SAMN02746041_03202
symbol: rplL
gene_biotype: protein_coding
description:
  LSU ribosomal protein L12P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.


ensembl_gene_id: SAMN02746041_03203
symbol: rplJ
gene_biotype: protein_coding
description:
  LSU ribosomal protein L10P; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.


ensembl_gene_id: SAMN02746041_03204
symbol: rplA
gene_biotype: protein_coding
description:
  LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.


ensembl_gene_id: SAMN02746041_03205
symbol: rplK
gene_biotype: protein_coding
description:
  LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.


ensembl_gene_id: SAMN02746041_03206
symbol: nusG
gene_biotype: protein_coding
description:
  Transcription antitermination protein nusG; Participates in transcription elongation, termination and antitermination.


ensembl_gene_id: SAMN02746041_03207
symbol: secE
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.


ensembl_gene_id: SAMN02746041_03222
symbol: dnaA-2
gene_biotype: protein_coding
description:
  Chromosomal replication initiator protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.


ensembl_gene_id: SAMN02746041_03248
symbol: SMC28377.1
gene_biotype: protein_coding
description:
  DNA polymerase-3 subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...]


ensembl_gene_id: SAMN02746041_03334
symbol: SMC28995.1
gene_biotype: protein_coding
description:
  Protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.


# pathwayInfo

id: CL:1007
description: Amino-acid biosynthesis, and Phenylalanine, tyrosine and tryptophan biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1007_Amino-acid_biosynthesis,_and_Phenylalanine,_tyrosine_and_tryptophan_biosynthesis


id: CL:1008
description: Phenylalanine, tyrosine and tryptophan biosynthesis, and Histidine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1008_Phenylalanine,_tyrosine_and_tryptophan_biosynthesis,_and_Histidine_biosynthesis


id: CL:1009
description: Phenylalanine, tyrosine and tryptophan biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1009_Phenylalanine,_tyrosine_and_tryptophan_biosynthesis


id: CL:1011
description: Chorismate metabolic process, and NeuB family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1011_Chorismate_metabolic_process,_and_NeuB_family


id: CL:1013
description: Chorismate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1013_Chorismate_biosynthetic_process


id: CL:1033
description: Tryptophan biosynthesis, and ADC synthase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1033_Tryptophan_biosynthesis,_and_ADC_synthase


id: CL:1036
description: Tryptophan biosynthesis, and ADC synthase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1036_Tryptophan_biosynthesis,_and_ADC_synthase


id: CL:1067
description: Lysine biosynthesis, and Arginine biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1067_Lysine_biosynthesis,_and_Arginine_biosynthetic_process


id: CL:1068
description: Arginine biosynthetic process, and Cobalt ion binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1068_Arginine_biosynthetic_process,_and_Cobalt_ion_binding


id: CL:1092
description: Lysine biosynthetic process, and Isoleucine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1092_Lysine_biosynthetic_process,_and_Isoleucine_biosynthesis


id: CL:1114
description: Mixed, incl. Pyridine nucleotide metabolic process, and CDP-alcohol phosphatidyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1114_Mixed,_incl._Pyridine_nucleotide_metabolic_process,_and_CDP-alcohol_phosphatidyltransferase


id: CL:1116
description: Mixed, incl. Pyridine nucleotide metabolic process, and CDP-alcohol phosphatidyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1116_Mixed,_incl._Pyridine_nucleotide_metabolic_process,_and_CDP-alcohol_phosphatidyltransferase


id: CL:1117
description: Pyridine nucleotide metabolic process, and Proline biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1117_Pyridine_nucleotide_metabolic_process,_and_Proline_biosynthesis


id: CL:1119
description: Pyridine nucleotide metabolic process, and Sir2 family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1119_Pyridine_nucleotide_metabolic_process,_and_Sir2_family


id: CL:1121
description: Sir2 family, and Nicotinamide-nucleotide adenylyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1121_Sir2_family,_and_Nicotinamide-nucleotide_adenylyltransferase_activity


id: CL:1145
description: Proline biosynthesis, and Ribosome assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1145_Proline_biosynthesis,_and_Ribosome_assembly


id: CL:1158
description: Mixed, incl. CDP-alcohol phosphatidyltransferase, and Alpha/Beta hydrolase fold
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1158_Mixed,_incl._CDP-alcohol_phosphatidyltransferase,_and_Alpha/Beta_hydrolase_fold


id: CL:1160
description: CDP-alcohol phosphatidyltransferase, and Phospholipid catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1160_CDP-alcohol_phosphatidyltransferase,_and_Phospholipid_catabolic_process


id: CL:1186
description: Nitrogen utilization, and Phosphoesterase MJ0912
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1186_Nitrogen_utilization,_and_Phosphoesterase_MJ0912


id: CL:1196
description: Mixed, incl. Pentose phosphate pathway, and Import across plasma membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1196_Mixed,_incl._Pentose_phosphate_pathway,_and_Import_across_plasma_membrane


id: CL:1197
description: Mixed, incl. Pentose phosphate pathway, and Import across plasma membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1197_Mixed,_incl._Pentose_phosphate_pathway,_and_Import_across_plasma_membrane


id: CL:1198
description: Mixed, incl. Pentose phosphate pathway, and Import across plasma membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1198_Mixed,_incl._Pentose_phosphate_pathway,_and_Import_across_plasma_membrane


id: CL:1199
description: Mixed, incl. Glycolytic process, and Import across plasma membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1199_Mixed,_incl._Glycolytic_process,_and_Import_across_plasma_membrane


id: CL:1201
description: Glycolytic process, and Sugar-phosphatase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1201_Glycolytic_process,_and_Sugar-phosphatase_activity


id: CL:1204
description: Glycolytic process, and NADPH regeneration
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1204_Glycolytic_process,_and_NADPH_regeneration


id: CL:1205
description: Glyceraldehyde 3-phosphate dehydrogenase, active site, and Glycolytic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1205_Glyceraldehyde_3-phosphate_dehydrogenase,_active_site,_and_Glycolytic_process


id: CL:1214
description: NADPH regeneration, and Glycolysis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1214_NADPH_regeneration,_and_Glycolysis


id: CL:123
description: Translation, and Ribonucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:123_Translation,_and_Ribonucleoside_triphosphate_biosynthetic_process


id: CL:1237
description: PTS EIIA type-2 domain, and Sugar transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1237_PTS_EIIA_type-2_domain,_and_Sugar_transport


id: CL:124
description: Translation, and Ribonucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:124_Translation,_and_Ribonucleoside_triphosphate_biosynthetic_process


id: CL:125
description: Translation, and Ribonucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:125_Translation,_and_Ribonucleoside_triphosphate_biosynthetic_process


id: CL:1252
description: Xylose isomerase-like TIM barrel, and Gfo/Idh/MocA-like oxidoreductase, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1252_Xylose_isomerase-like_TIM_barrel,_and_Gfo/Idh/MocA-like_oxidoreductase,_N-terminal


id: CL:1262
description: FAD-linked oxidase, C-terminal, and Carbohydrate kinase, FGGY
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1262_FAD-linked_oxidase,_C-terminal,_and_Carbohydrate_kinase,_FGGY


id: CL:127
description: Translation, and Purine nucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:127_Translation,_and_Purine_nucleoside_triphosphate_biosynthetic_process


id: CL:1279
description: Serine biosynthesis, and Phosphoglycolate phosphatase-like, domain 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1279_Serine_biosynthesis,_and_Phosphoglycolate_phosphatase-like,_domain_2


id: CL:128
description: Translation, and Purine nucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:128_Translation,_and_Purine_nucleoside_triphosphate_biosynthetic_process


id: CL:1281
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1281_D-isomer_specific_2-hydroxyacid_dehydrogenase,_catalytic_domain,_and_Phosphoglycolate_phosphatase-like,_domain_2

description:
  D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain, and Phosphoglycolate phosphatase-like, domain 2


id: CL:129
description: Translation, and Purine nucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:129_Translation,_and_Purine_nucleoside_triphosphate_biosynthetic_process


id: CL:1305
description: Mixed, incl. Cell division, and tRNA threonylcarbamoyladenosine modification
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1305_Mixed,_incl._Cell_division,_and_tRNA_threonylcarbamoyladenosine_modification


id: CL:1307
description: Mixed, incl. Cell division, and Peptidoglycan metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1307_Mixed,_incl._Cell_division,_and_Peptidoglycan_metabolic_process


id: CL:1308
description: Mixed, incl. Regulation of cell shape, and Penicillin binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1308_Mixed,_incl._Regulation_of_cell_shape,_and_Penicillin_binding


id: CL:131
description: Translation, and Purine nucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:131_Translation,_and_Purine_nucleoside_triphosphate_biosynthetic_process


id: CL:1310
description: Mixed, incl. Cell shape, and Beta-lactamase/transpeptidase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1310_Mixed,_incl._Cell_shape,_and_Beta-lactamase/transpeptidase-like


id: CL:1313
description: Mixed, incl. Cell shape, and Cell division site
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1313_Mixed,_incl._Cell_shape,_and_Cell_division_site


id: CL:1315
description: Cell shape, and Cell division site
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1315_Cell_shape,_and_Cell_division_site


id: CL:1317
description: Cell shape, and Penicillin-binding Protein dimerisation domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1317_Cell_shape,_and_Penicillin-binding_Protein_dimerisation_domain


id: CL:1319
description: Mur ligase, central, and HEAT repeats
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1319_Mur_ligase,_central,_and_HEAT_repeats


id: CL:133
description: Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:133_Ribosome,_and_Translation_regulator_activity


id: CL:1354
description: Mixed, incl. Cell cycle protein, and Cell shape determining protein MreB
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1354_Mixed,_incl._Cell_cycle_protein,_and_Cell_shape_determining_protein_MreB


id: CL:136
description: Ribosome, and Translational elongation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:136_Ribosome,_and_Translational_elongation


id: CL:139
description: Ribosome, and Translational elongation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:139_Ribosome,_and_Translational_elongation


id: CL:1390
description: Mixed, incl. Peptidase M23, and PDZ domain 6
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1390_Mixed,_incl._Peptidase_M23,_and_PDZ_domain_6


id: CL:1412
description: Mixed, incl. tRNA threonylcarbamoyladenosine modification, and Alanine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1412_Mixed,_incl._tRNA_threonylcarbamoyladenosine_modification,_and_Alanine_metabolic_process


id: CL:1413
description: tRNA threonylcarbamoyladenosine modification, and L-alanine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1413_tRNA_threonylcarbamoyladenosine_modification,_and_L-alanine_metabolic_process


id: CL:142
description: Structural constituent of ribosome, and Translational elongation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:142_Structural_constituent_of_ribosome,_and_Translational_elongation


id: CL:1427
description: Vitamin B6 metabolism, and PhoH-like protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1427_Vitamin_B6_metabolism,_and_PhoH-like_protein


id: CL:1447
description: Mixed, incl. Histone-like DNA-binding protein, and AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1447_Mixed,_incl._Histone-like_DNA-binding_protein,_and_AAA_domain


id: CL:1449
description: Mixed, incl. AAA domain, and Chromosome partition
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1449_Mixed,_incl._AAA_domain,_and_Chromosome_partition


id: CL:145
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:145_Structural_constituent_of_ribosome


id: CL:1452
description: AAA domain, and Protein of unknown function (DUF1573)
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1452_AAA_domain,_and_Protein_of_unknown_function_(DUF1573)


id: CL:1471
description: Histone-like DNA-binding protein, and DnaA N-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1471_Histone-like_DNA-binding_protein,_and_DnaA_N-terminal_domain


id: CL:1482
description: Mostly uncharacterized, incl. TatD related DNase, and GMP metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1482_Mostly_uncharacterized,_incl._TatD_related_DNase,_and_GMP_metabolic_process


id: CL:1485
description: Mixed, incl. GMP metabolic process, and 3-5-exoribonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1485_Mixed,_incl._GMP_metabolic_process,_and_3-5-exoribonuclease_activity


id: CL:1496
description: Mixed, incl. TatD related DNase, and Nucleotide diphosphatase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1496_Mixed,_incl._TatD_related_DNase,_and_Nucleotide_diphosphatase_activity


id: CL:150
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:150_Structural_constituent_of_ribosome


id: CL:1505
description: Mixed, incl. Deacetylase activity, and Chromosome organization
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1505_Mixed,_incl._Deacetylase_activity,_and_Chromosome_organization


id: CL:1508
description: Mixed, incl. Histone deacetylase domain, and Chromatin remodeling
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1508_Mixed,_incl._Histone_deacetylase_domain,_and_Chromatin_remodeling


id: CL:151
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:151_Structural_constituent_of_ribosome


id: CL:1512
description: Chromatin remodeling, and Histone deacetylase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1512_Chromatin_remodeling,_and_Histone_deacetylase_domain


id: CL:152
description: rRNA-binding, and Protein transport by the Sec complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:152_rRNA-binding,_and_Protein_transport_by_the_Sec_complex


id: CL:153
description: Mixed, incl. Large ribosomal subunit, and Large ribosomal subunit rRNA binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:153_Mixed,_incl._Large_ribosomal_subunit,_and_Large_ribosomal_subunit_rRNA_binding


id: CL:1544
description: Mixed, incl. Regulation of cell cycle, and Epimerase family protein SDR39U1
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1544_Mixed,_incl._Regulation_of_cell_cycle,_and_Epimerase_family_protein_SDR39U1


id: CL:1546
description: Mixed, incl. Epimerase family protein SDR39U1, and LexA/Signal peptidase-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1546_Mixed,_incl._Epimerase_family_protein_SDR39U1,_and_LexA/Signal_peptidase-like_superfamily


id: CL:1569
description: Mixed, incl. Ribonuclease E/G, and Regulation of catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1569_Mixed,_incl._Ribonuclease_E/G,_and_Regulation_of_catabolic_process


id: CL:1583
description: Mixed, incl. Cold shock, CspA, and Metalloenzyme
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1583_Mixed,_incl._Cold_shock,_CspA,_and_Metalloenzyme


id: CL:1585
description: Cold shock, CspA, and Metalloenzyme
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1585_Cold_shock,_CspA,_and_Metalloenzyme


id: CL:1613
description: Mixed, incl. Butanoate metabolism, and Fatty acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1613_Mixed,_incl._Butanoate_metabolism,_and_Fatty_acid_metabolic_process


id: CL:1614
description: Mixed, incl. Fatty acid metabolic process, and acyl-CoA dehydrogenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1614_Mixed,_incl._Fatty_acid_metabolic_process,_and_acyl-CoA_dehydrogenase_activity


id: CL:1616
description: Mixed, incl. Fatty acid metabolic process, and acyl-CoA dehydrogenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1616_Mixed,_incl._Fatty_acid_metabolic_process,_and_acyl-CoA_dehydrogenase_activity


id: CL:1617
description: Mixed, incl. Fatty acid metabolic process, and acyl-CoA dehydrogenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1617_Mixed,_incl._Fatty_acid_metabolic_process,_and_acyl-CoA_dehydrogenase_activity


id: CL:1618
description: Mixed, incl. Fatty acid degradation, and ClpP/crotonase-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1618_Mixed,_incl._Fatty_acid_degradation,_and_ClpP/crotonase-like_domain_superfamily


id: CL:1620
description: Mixed, incl. Fatty acid metabolic process, and Enoyl-CoA hydratase, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1620_Mixed,_incl._Fatty_acid_metabolic_process,_and_Enoyl-CoA_hydratase,_C-terminal


id: CL:1621
description: Fatty acid metabolism, and Enoyl-CoA hydratase/isomerase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1621_Fatty_acid_metabolism,_and_Enoyl-CoA_hydratase/isomerase


id: CL:1625
description: Lipid oxidation, and Enoyl-CoA hydratase/isomerase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1625_Lipid_oxidation,_and_Enoyl-CoA_hydratase/isomerase


id: CL:1626
description: Enoyl-CoA hydratase/isomerase, and C-acyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1626_Enoyl-CoA_hydratase/isomerase,_and_C-acyltransferase_activity


id: CL:1628
description: Thiolase, N-terminal, and Enoyl-CoA hydratase/isomerase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1628_Thiolase,_N-terminal,_and_Enoyl-CoA_hydratase/isomerase


id: CL:1629
description: Enoyl-CoA hydratase/isomerase, and Thiolase, active site
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1629_Enoyl-CoA_hydratase/isomerase,_and_Thiolase,_active_site


id: CL:1640
description: Thiolase, N-terminal domain, and 3-hydroxyacyl-CoA dehydrogenase, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1640_Thiolase,_N-terminal_domain,_and_3-hydroxyacyl-CoA_dehydrogenase,_C-terminal


id: CL:1662
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1662_Mixed,_incl._3-hydroxyacyl-CoA_dehydrogenase_activity,_and_Short-chain_dehydrogenase/reductase,_conserved_site

description:
  Mixed, incl. 3-hydroxyacyl-CoA dehydrogenase activity, and Short-chain dehydrogenase/reductase, conserved site


id: CL:1682
description: Ligase activity, forming carbon-carbon bonds, and Conserved carboxylase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1682_Ligase_activity,_forming_carbon-carbon_bonds,_and_Conserved_carboxylase_domain


id: CL:1700
description: Mixed, incl. Tyrosine metabolism, and Acetate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1700_Mixed,_incl._Tyrosine_metabolism,_and_Acetate_metabolic_process


id: CL:1703
description: Taurine and hypotaurine metabolism, and Acetate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1703_Taurine_and_hypotaurine_metabolism,_and_Acetate_metabolic_process


id: CL:171
description: Large ribosomal subunit, and rRNA-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:171_Large_ribosomal_subunit,_and_rRNA-binding


id: CL:1718
description: Naphthalene degradation, and Zinc-binding dehydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1718_Naphthalene_degradation,_and_Zinc-binding_dehydrogenase


id: CL:1729
description: Electron transfer flavoprotein domain, and acyl-CoA dehydrogenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1729_Electron_transfer_flavoprotein_domain,_and_acyl-CoA_dehydrogenase_activity


id: CL:1731
description: Electron transfer flavoprotein domain, and FAD binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1731_Electron_transfer_flavoprotein_domain,_and_FAD_binding


id: CL:1752
description: Coenzyme A transferase, and AhpD-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1752_Coenzyme_A_transferase,_and_AhpD-like


id: CL:1771
description: Fatty acid synthase activity, and Nitronate monooxygenase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1771_Fatty_acid_synthase_activity,_and_Nitronate_monooxygenase


id: CL:1796
description: Pyruvate metabolism, and Valine, leucine and isoleucine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1796_Pyruvate_metabolism,_and_Valine,_leucine_and_isoleucine_biosynthesis


id: CL:1798
description: Glycolysis / Gluconeogenesis, and Indolepyruvate oxidoreductase subunit IorA
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1798_Glycolysis_/_Gluconeogenesis,_and_Indolepyruvate_oxidoreductase_subunit_IorA


id: CL:1802
description: acetyl-CoA biosynthetic process from pyruvate, and Pyruvate ferredoxin/flavodoxin oxidoreductase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1802_acetyl-CoA_biosynthetic_process_from_pyruvate,_and_Pyruvate_ferredoxin/flavodoxin_oxidoreductase


id: CL:1805
description: acetyl-CoA biosynthetic process from pyruvate
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1805_acetyl-CoA_biosynthetic_process_from_pyruvate


id: CL:1826
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1826_Thiamin_diphosphate-binding_fold,_and_2-oxoacid:acceptor_oxidoreductase,_gamma_subunit,_pyruvate/2-ketoisovalerate

description:
  Thiamin diphosphate-binding fold, and 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate


id: CL:1845
description: Pyruvate, water dikinase activity, and Conserved carboxylase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1845_Pyruvate,_water_dikinase_activity,_and_Conserved_carboxylase_domain


id: CL:186
description: Mixed, incl. Small ribosomal subunit, and Ribosomal protein L2, domain 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:186_Mixed,_incl._Small_ribosomal_subunit,_and_Ribosomal_protein_L2,_domain_2


id: CL:1875
description: Valine, leucine and isoleucine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1875_Valine,_leucine_and_isoleucine_biosynthesis


id: CL:1878
description: Valine, leucine and isoleucine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1878_Valine,_leucine_and_isoleucine_biosynthesis


id: CL:1880
description: Branched-chain amino acid biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1880_Branched-chain_amino_acid_biosynthesis


id: CL:1916
description: Oxidative phosphorylation, and Glycine catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1916_Oxidative_phosphorylation,_and_Glycine_catabolic_process


id: CL:1917
description: Oxidative phosphorylation, and Tricarboxylic acid cycle
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1917_Oxidative_phosphorylation,_and_Tricarboxylic_acid_cycle


id: CL:1921
description: Quinone binding, and Proton-conducting membrane transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1921_Quinone_binding,_and_Proton-conducting_membrane_transporter


id: CL:1922
description: Quinone binding, and Thioredoxin-like [2Fe-2S] ferredoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1922_Quinone_binding,_and_Thioredoxin-like_[2Fe-2S]_ferredoxin


id: CL:1980
description: Tricarboxylic acid cycle, and FAD-dependent oxidoreductase SdhA/FrdA/AprA
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1980_Tricarboxylic_acid_cycle,_and_FAD-dependent_oxidoreductase_SdhA/FrdA/AprA


id: CL:1982
description: CoA-ligase, and FAD-dependent oxidoreductase SdhA/FrdA/AprA
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1982_CoA-ligase,_and_FAD-dependent_oxidoreductase_SdhA/FrdA/AprA


id: CL:1998
description: Mixed, incl. Succinate dehydrogenase activity, and 2Fe-2S iron-sulfur cluster binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:1998_Mixed,_incl._Succinate_dehydrogenase_activity,_and_2Fe-2S_iron-sulfur_cluster_binding_domain


id: CL:2012
description: Mixed, incl. Glycine catabolic process, and Protein lipoylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2012_Mixed,_incl._Glycine_catabolic_process,_and_Protein_lipoylation


id: CL:2030
description: Ribose-phosphate pyrophosphokinase, and Lipoyl
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2030_Ribose-phosphate_pyrophosphokinase,_and_Lipoyl


id: CL:2039
description: Mixed, incl. Methane metabolism, and Sulfur metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2039_Mixed,_incl._Methane_metabolism,_and_Sulfur_metabolism


id: CL:2041
description: Anaerobic respiration, and Methane metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2041_Anaerobic_respiration,_and_Methane_metabolism


id: CL:2042
description: Mixed, incl. Anaerobic respiration, and Nitrogen metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2042_Mixed,_incl._Anaerobic_respiration,_and_Nitrogen_metabolism


id: CL:2043
description: FAD/NAD(P)-binding domain, and Respiratory chain complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2043_FAD/NAD(P)-binding_domain,_and_Respiratory_chain_complex


id: CL:2044
description: Dihydroprymidine dehydrogenase domain II, and Respiratory chain complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2044_Dihydroprymidine_dehydrogenase_domain_II,_and_Respiratory_chain_complex


id: CL:2046
description: Dihydroprymidine dehydrogenase domain II, and Respiratory chain complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2046_Dihydroprymidine_dehydrogenase_domain_II,_and_Respiratory_chain_complex


id: CL:2048
description: Mixed, incl. Dihydroprymidine dehydrogenase domain II, and Glutamate synthase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2048_Mixed,_incl._Dihydroprymidine_dehydrogenase_domain_II,_and_Glutamate_synthase_domain


id: CL:2051
description: Dihydroprymidine dehydrogenase domain II, and Glutamate synthase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2051_Dihydroprymidine_dehydrogenase_domain_II,_and_Glutamate_synthase_domain


id: CL:2053
description: Dihydroprymidine dehydrogenase domain II, and Glutamate synthase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2053_Dihydroprymidine_dehydrogenase_domain_II,_and_Glutamate_synthase_domain


id: CL:2067
description: Dihydroprymidine dehydrogenase domain II, and Cytochrome-c3 hydrogenase, gamma subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2067_Dihydroprymidine_dehydrogenase_domain_II,_and_Cytochrome-c3_hydrogenase,_gamma_subunit


id: CL:2105
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2105_Mixed,_incl._FAD/NAD-linked_reductase,_dimerisation_domain_superfamily,_and_Sarcosine_oxidase_activity

description:
  Mixed, incl. FAD/NAD-linked reductase, dimerisation domain superfamily, and Sarcosine oxidase activity


id: CL:2108
description: Sarcosine oxidase activity, and FAD dependent oxidoreductase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2108_Sarcosine_oxidase_activity,_and_FAD_dependent_oxidoreductase


id: CL:2126
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2126_Mixed,_incl._Oxidoreductase_activity,_acting_on_other_nitrogenous_compounds_as_donors,_and_Molydopterin_dinucleotide_binding_domain

description:
  Mixed, incl. Oxidoreductase activity, acting on other nitrogenous compounds as donors, and Molydopterin dinucleotide binding domain


id: CL:2128
description: Mixed, incl. Acetylene hydratase activity, and Formate dehydrogenase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2128_Mixed,_incl._Acetylene_hydratase_activity,_and_Formate_dehydrogenase_complex


id: CL:213
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:213_Structural_constituent_of_ribosome


id: CL:2130
description: Mixed, incl. Acetylene hydratase activity, and NrfD family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2130_Mixed,_incl._Acetylene_hydratase_activity,_and_NrfD_family


id: CL:215
description: Mixed, incl. Zinc-binding ribosomal protein, and Large ribosomal subunit rRNA binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:215_Mixed,_incl._Zinc-binding_ribosomal_protein,_and_Large_ribosomal_subunit_rRNA_binding


id: CL:2156
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2156_Oxidoreductase_activity,_acting_on_other_nitrogenous_compounds_as_donors,_oxygen_as_acceptor,_and_Nitrate_assimilation

description:
  Oxidoreductase activity, acting on other nitrogenous compounds as donors, oxygen as acceptor, and Nitrate assimilation


id: CL:2165
description: Methane metabolism, and Lactate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2165_Methane_metabolism,_and_Lactate_metabolic_process


id: CL:2166
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2166_Mixed,_incl._H(2):CoB-CoM_heterodisulfide,ferredoxin_reductase_subunit_A-like,_and_F420-non-reducing_hydrogenase_iron-sulfur_subunit_D

description:
  Mixed, incl. H(2):CoB-CoM heterodisulfide,ferredoxin reductase subunit A-like, and F420-non-reducing hydrogenase iron-sulfur subunit D


id: CL:2167
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2167_H(2):CoB-CoM_heterodisulfide,ferredoxin_reductase_subunit_A-like,_and_F420-non-reducing_hydrogenase_iron-sulfur_subunit_D

description:
  H(2):CoB-CoM heterodisulfide,ferredoxin reductase subunit A-like, and F420-non-reducing hydrogenase iron-sulfur subunit D


id: CL:2169
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2169_H(2):CoB-CoM_heterodisulfide,ferredoxin_reductase_subunit_A-like,_and_F420-non-reducing_hydrogenase_iron-sulfur_subunit_D

description:
  H(2):CoB-CoM heterodisulfide,ferredoxin reductase subunit A-like, and F420-non-reducing hydrogenase iron-sulfur subunit D


id: CL:2171
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2171_H(2):CoB-CoM_heterodisulfide,ferredoxin_reductase_subunit_A-like,_and_F420-non-reducing_hydrogenase_iron-sulfur_subunit_D

description:
  H(2):CoB-CoM heterodisulfide,ferredoxin reductase subunit A-like, and F420-non-reducing hydrogenase iron-sulfur subunit D


id: CL:2173
description: H(2):CoB-CoM heterodisulfide,ferredoxin reductase subunit A-like, and 4Fe-4S dicluster domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2173_H(2):CoB-CoM_heterodisulfide,ferredoxin_reductase_subunit_A-like,_and_4Fe-4S_dicluster_domain


id: CL:2175
description: H(2):CoB-CoM heterodisulfide,ferredoxin reductase subunit A-like, and 4Fe-4S dicluster domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2175_H(2):CoB-CoM_heterodisulfide,ferredoxin_reductase_subunit_A-like,_and_4Fe-4S_dicluster_domain


id: CL:2177
description: Mixed, incl. Carotenoid metabolic process, and F420-non-reducing hydrogenase iron-sulfur subunit D
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2177_Mixed,_incl._Carotenoid_metabolic_process,_and_F420-non-reducing_hydrogenase_iron-sulfur_subunit_D


id: CL:2215
description: F420-non-reducing hydrogenase iron-sulfur subunit D, and 4Fe-4S dicluster domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2215_F420-non-reducing_hydrogenase_iron-sulfur_subunit_D,_and_4Fe-4S_dicluster_domain


id: CL:2235
description: NADH metabolic process, and Peptidase A31 family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2235_NADH_metabolic_process,_and_Peptidase_A31_family


id: CL:2245
description: Mixed, incl. 4Fe-4S dicluster domain, and Oxidoreductase FAD-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2245_Mixed,_incl._4Fe-4S_dicluster_domain,_and_Oxidoreductase_FAD-binding_domain


id: CL:2262
description: LUD domain, and Cysteine-rich domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2262_LUD_domain,_and_Cysteine-rich_domain


id: CL:2283
description: Mixed, incl. Sulfur metabolism, and Glycine betaine catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2283_Mixed,_incl._Sulfur_metabolism,_and_Glycine_betaine_catabolic_process


id: CL:2284
description: Mixed, incl. Glycine betaine catabolic process, and Nitrite/sulphite reductase 4Fe-4S domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2284_Mixed,_incl._Glycine_betaine_catabolic_process,_and_Nitrite/sulphite_reductase_4Fe-4S_domain


id: CL:2286
description: Mixed, incl. Nitrite/sulphite reductase 4Fe-4S domain, and NrfD family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2286_Mixed,_incl._Nitrite/sulphite_reductase_4Fe-4S_domain,_and_NrfD_family


id: CL:2288
description: Mixed, incl. NrfD family, and Nitrate assimilation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2288_Mixed,_incl._NrfD_family,_and_Nitrate_assimilation


id: CL:229
description: Mixed, incl. L28p-like, and Zinc-binding ribosomal protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:229_Mixed,_incl._L28p-like,_and_Zinc-binding_ribosomal_protein


id: CL:2298
description: Nitrite/sulphite reductase 4Fe-4S domain, and Sulfur relay system
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2298_Nitrite/sulphite_reductase_4Fe-4S_domain,_and_Sulfur_relay_system


id: CL:2315
description: Mixed, incl. PUA-like domain, and Sulfate reduction
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2315_Mixed,_incl._PUA-like_domain,_and_Sulfate_reduction


id: CL:2317
description: Sulfate reduction, and PUA-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2317_Sulfate_reduction,_and_PUA-like_domain


id: CL:2337
description: Mixed, incl. Sulfur amino acid metabolic process, and 4Fe-4S domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2337_Mixed,_incl._Sulfur_amino_acid_metabolic_process,_and_4Fe-4S_domain


id: CL:2338
description: Mixed, incl. 4Fe-4S domain, and Prismane-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2338_Mixed,_incl._4Fe-4S_domain,_and_Prismane-like_superfamily


id: CL:2340
description: Mixed, incl. 4Fe-4S domain, and Prismane-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2340_Mixed,_incl._4Fe-4S_domain,_and_Prismane-like_superfamily


id: CL:2342
description: Mixed, incl. Prismane-like superfamily, and Putative Fe-S cluster
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2342_Mixed,_incl._Prismane-like_superfamily,_and_Putative_Fe-S_cluster


id: CL:2345
description: Prismane-like superfamily, and CO dehydrogenase/acetyl-CoA synthase delta subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2345_Prismane-like_superfamily,_and_CO_dehydrogenase/acetyl-CoA_synthase_delta_subunit


id: CL:2385
description: Sulfur amino acid metabolic process, and One-carbon metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2385_Sulfur_amino_acid_metabolic_process,_and_One-carbon_metabolism


id: CL:2387
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2387_One-carbon_metabolism,_and_5-methyltetrahydropteroyltri-L-glutamate-dependent_methyltransferase_activity

description:
  One-carbon metabolism, and 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity


id: CL:2389
description: Cysteine metabolic process, and Adenosylhomocysteinase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2389_Cysteine_metabolic_process,_and_Adenosylhomocysteinase-like


id: CL:2425
description: Domain of unknown function DUF362, and PurE domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2425_Domain_of_unknown_function_DUF362,_and_PurE_domain


id: CL:2438
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2438_Mixed,_incl._Oxaloacetate_decarboxylase,_gamma_chain_,_and_Na+-transporting_oxaloacetate_decarboxylase_beta_subunit

description:
  Mixed, incl. Oxaloacetate decarboxylase, gamma chain , and Na+-transporting oxaloacetate decarboxylase beta subunit


id: CL:2455
description: Mixed, incl. Thioredoxin-like superfamily, and Sulfur relay system
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2455_Mixed,_incl._Thioredoxin-like_superfamily,_and_Sulfur_relay_system


id: CL:2456
description: Mixed, incl. Iron-sulfur cluster assembly, and Metallo-beta-lactamase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2456_Mixed,_incl._Iron-sulfur_cluster_assembly,_and_Metallo-beta-lactamase


id: CL:2457
description: Mixed, incl. Metallo-beta-lactamase, and Sulfur relay system
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2457_Mixed,_incl._Metallo-beta-lactamase,_and_Sulfur_relay_system


id: CL:2458
description: Mixed, incl. Metallo-beta-lactamase, and Heavy-metal-associated domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2458_Mixed,_incl._Metallo-beta-lactamase,_and_Heavy-metal-associated_domain


id: CL:2460
description: Metallo-beta-lactamase, and Blockage of phagosome acidification
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2460_Metallo-beta-lactamase,_and_Blockage_of_phagosome_acidification


id: CL:2463
description: Blockage of phagosome acidification, and tRNA pseudouridine synthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2463_Blockage_of_phagosome_acidification,_and_tRNA_pseudouridine_synthesis


id: CL:2485
description: Mixed, incl. Heavy-metal-associated domain, and Rubredoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2485_Mixed,_incl._Heavy-metal-associated_domain,_and_Rubredoxin


id: CL:2502
description: Mixed, incl. Sulphur transport, and DsrEFH-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2502_Mixed,_incl._Sulphur_transport,_and_DsrEFH-like


id: CL:2523
description: Iron-sulfur cluster assembly, and Cysteine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2523_Iron-sulfur_cluster_assembly,_and_Cysteine_metabolic_process


id: CL:2524
description: Iron-sulfur cluster assembly complex, and Cysteine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2524_Iron-sulfur_cluster_assembly_complex,_and_Cysteine_metabolic_process


id: CL:2543
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2543_Thioredoxin-like_superfamily,_and_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_NAD(P)_as_acceptor

description:
  Thioredoxin-like superfamily, and Oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor


id: CL:2544
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2544_Thioredoxin-like_superfamily,_and_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_NAD(P)_as_acceptor

description:
  Thioredoxin-like superfamily, and Oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor


id: CL:2546
description: Thioredoxin domain, and F plasmid transfer operon protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2546_Thioredoxin_domain,_and_F_plasmid_transfer_operon_protein


id: CL:257
description: Small ribosomal subunit, and Initiation factor
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:257_Small_ribosomal_subunit,_and_Initiation_factor


id: CL:2570
description: Protein-disulfide reductase (NAD(P)) activity, and Protein repair
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2570_Protein-disulfide_reductase_(NAD(P))_activity,_and_Protein_repair


id: CL:2586
description: Mixed, incl. Thioredoxin domain, and Peptidase M16, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2586_Mixed,_incl._Thioredoxin_domain,_and_Peptidase_M16,_N-terminal


id: CL:2607
description: Mixed, incl. CoA-transferase family III, and Cobalamin binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2607_Mixed,_incl._CoA-transferase_family_III,_and_Cobalamin_binding


id: CL:2608
description: Mixed, incl. CoA-transferase family III, and Cobalamin binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2608_Mixed,_incl._CoA-transferase_family_III,_and_Cobalamin_binding


id: CL:2610
description: Cobalamin binding, and CoA-transferase family III
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2610_Cobalamin_binding,_and_CoA-transferase_family_III


id: CL:2613
description: Mixed, incl. Methylmalonyl-CoA mutase, and SIMIBI class G3E GTPase, ArgK/MeaB
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2613_Mixed,_incl._Methylmalonyl-CoA_mutase,_and_SIMIBI_class_G3E_GTPase,_ArgK/MeaB


id: CL:2642
description: Nitroreductase, and AMP-binding enzyme C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2642_Nitroreductase,_and_AMP-binding_enzyme_C-terminal_domain


id: CL:2651
description: Mixed, incl. CoA-transferase family III
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2651_Mixed,_incl._CoA-transferase_family_III


id: CL:2670
description: Protein refolding, and Protein maturation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2670_Protein_refolding,_and_Protein_maturation


id: CL:2672
description: ATPase complex, and Protein maturation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2672_ATPase_complex,_and_Protein_maturation


id: CL:2695
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2695_Mixed,_incl._S-adenosyl-L-methionine-dependent_methyltransferase_superfamily,_and_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds

description:
  Mixed, incl. S-adenosyl-L-methionine-dependent methyltransferase superfamily, and Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds


id: CL:2696
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2696_Mixed,_incl._S-adenosyl-L-methionine-dependent_methyltransferase_superfamily,_and_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds

description:
  Mixed, incl. S-adenosyl-L-methionine-dependent methyltransferase superfamily, and Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds


id: CL:2697
description: Mixed, incl. Arginine and proline metabolism, and Formamide metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2697_Mixed,_incl._Arginine_and_proline_metabolism,_and_Formamide_metabolic_process


id: CL:2698
description: Mixed, incl. Polyamine metabolic process, and Formamide metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2698_Mixed,_incl._Polyamine_metabolic_process,_and_Formamide_metabolic_process


id: CL:2699
description: Mixed, incl. Polyamine metabolic process, and GNAT domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2699_Mixed,_incl._Polyamine_metabolic_process,_and_GNAT_domain


id: CL:2700
description: Polyamine metabolic process, and Deaminase MtaD/DadD
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2700_Polyamine_metabolic_process,_and_Deaminase_MtaD/DadD


id: CL:2724
description: Cupin domain, and Acetyltransferase (GNAT) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2724_Cupin_domain,_and_Acetyltransferase_(GNAT)_domain


id: CL:2752
description: Mixed, incl. Biotin metabolic process, and Methyltransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2752_Mixed,_incl._Biotin_metabolic_process,_and_Methyltransferase_domain


id: CL:2753
description: Mixed, incl. Methyltransferase domain, and Creatinase, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2753_Mixed,_incl._Methyltransferase_domain,_and_Creatinase,_N-terminal


id: CL:2764
description: Biotin metabolic process, and Monooxygenase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2764_Biotin_metabolic_process,_and_Monooxygenase


id: CL:2779
description: Quinone metabolic process, and Hydrolase activity, hydrolyzing N-glycosyl compounds
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2779_Quinone_metabolic_process,_and_Hydrolase_activity,_hydrolyzing_N-glycosyl_compounds


id: CL:2780
description: Menaquinone biosynthesis, and Ubiquinone metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2780_Menaquinone_biosynthesis,_and_Ubiquinone_metabolic_process


id: CL:2782
description: Menaquinone biosynthesis, and Amino acid salvage
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2782_Menaquinone_biosynthesis,_and_Amino_acid_salvage


id: CL:2801
description: Mixed, incl. LOG family, and AMP salvage
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2801_Mixed,_incl._LOG_family,_and_AMP_salvage


id: CL:2813
description: Mixed, incl. YaeB-like, and Amino acid salvage
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2813_Mixed,_incl._YaeB-like,_and_Amino_acid_salvage


id: CL:2822
description: Mixed, incl. Metal ion transport, and Gated channel activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2822_Mixed,_incl._Metal_ion_transport,_and_Gated_channel_activity


id: CL:2824
description: Mixed, incl. Potassium ion transport, and Antiporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2824_Mixed,_incl._Potassium_ion_transport,_and_Antiporter_activity


id: CL:2825
description: Mixed, incl. Potassium ion transport, and Antiporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2825_Mixed,_incl._Potassium_ion_transport,_and_Antiporter_activity


id: CL:2828
description: Potassium ion transport, and Citrate transporter-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2828_Potassium_ion_transport,_and_Citrate_transporter-like_domain


id: CL:2852
description: Mixed, incl. LSM domain superfamily, and Aldehyde dehydrogenase, cysteine active site
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2852_Mixed,_incl._LSM_domain_superfamily,_and_Aldehyde_dehydrogenase,_cysteine_active_site


id: CL:2868
description: Mixed, incl. Citrate transporter-like domain, and Response to arsenic-containing substance
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2868_Mixed,_incl._Citrate_transporter-like_domain,_and_Response_to_arsenic-containing_substance


id: CL:2877
description: Mostly uncharacterized, incl. UspA, and Glycosyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2877_Mostly_uncharacterized,_incl._UspA,_and_Glycosyltransferase_activity


id: CL:2878
description: Mostly uncharacterized, incl. UspA, and Glycosyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2878_Mostly_uncharacterized,_incl._UspA,_and_Glycosyltransferase_activity


id: CL:2879
description: Mostly uncharacterized, incl. UspA, and Tetratricopeptide-like helical domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2879_Mostly_uncharacterized,_incl._UspA,_and_Tetratricopeptide-like_helical_domain_superfamily


id: CL:2880
description: Mostly uncharacterized, incl. UspA, and Tetratricopeptide-like helical domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2880_Mostly_uncharacterized,_incl._UspA,_and_Tetratricopeptide-like_helical_domain_superfamily


id: CL:2881
description: Mostly uncharacterized, incl. UspA, and Tetratricopeptide-like helical domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2881_Mostly_uncharacterized,_incl._UspA,_and_Tetratricopeptide-like_helical_domain_superfamily


id: CL:2883
description: Mixed, incl. UspA, and SPOR domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2883_Mixed,_incl._UspA,_and_SPOR_domain


id: CL:2885
description: Mixed, incl. UspA, and Class III cytochrome C
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2885_Mixed,_incl._UspA,_and_Class_III_cytochrome_C


id: CL:2886
description: Mixed, incl. UspA, and Class III cytochrome C
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2886_Mixed,_incl._UspA,_and_Class_III_cytochrome_C


id: CL:2888
description: Mixed, incl. Class III cytochrome C, and Dynamin family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2888_Mixed,_incl._Class_III_cytochrome_C,_and_Dynamin_family


id: CL:2890
description: Class III cytochrome C, and Tetratricopeptide repeats
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2890_Class_III_cytochrome_C,_and_Tetratricopeptide_repeats


id: CL:2919
description: Mostly uncharacterized, incl. SEC-C motif, and tRNA 3-end processing
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2919_Mostly_uncharacterized,_incl._SEC-C_motif,_and_tRNA_3-end_processing


id: CL:2921
description: Mixed, incl. SEC-C motif, and Diguanylate cyclase, GGDEF domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2921_Mixed,_incl._SEC-C_motif,_and_Diguanylate_cyclase,_GGDEF_domain


id: CL:2949
description: Mixed, incl. D-aminoacyl-tRNA deacylase-like superfamily, and UspA
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2949_Mixed,_incl._D-aminoacyl-tRNA_deacylase-like_superfamily,_and_UspA


id: CL:296
description: RNA polymerase, and Transcription termination
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:296_RNA_polymerase,_and_Transcription_termination


id: CL:2967
description: Mixed, incl. Peptidyl-lysine modification to peptidyl-hypusine, and Lysine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2967_Mixed,_incl._Peptidyl-lysine_modification_to_peptidyl-hypusine,_and_Lysine_metabolic_process


id: CL:2970
description: Peptidyl-lysine modification to peptidyl-hypusine, and Peptidase M48
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2970_Peptidyl-lysine_modification_to_peptidyl-hypusine,_and_Peptidase_M48


id: CL:2985
description: Mixed, incl. Aminotransferase class IV, and Cyclophilin-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2985_Mixed,_incl._Aminotransferase_class_IV,_and_Cyclophilin-like_domain_superfamily


id: CL:2994
description: Mixed, incl. Glycosyl transferase, family 28, C-terminal, and Calcium ion binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2994_Mixed,_incl._Glycosyl_transferase,_family_28,_C-terminal,_and_Calcium_ion_binding


id: CL:2997
description: Glycosyl transferase, family 28, C-terminal, and NodB homology domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:2997_Glycosyl_transferase,_family_28,_C-terminal,_and_NodB_homology_domain


id: CL:3015
description: Mostly uncharacterized, incl. ABC-2 family transporter protein, and Peptidase U32
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:3015_Mostly_uncharacterized,_incl._ABC-2_family_transporter_protein,_and_Peptidase_U32


id: CL:3016
description: Mixed, incl. Peptidase U32, and 4Fe4S-binding SPASM domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:3016_Mixed,_incl._Peptidase_U32,_and_4Fe4S-binding_SPASM_domain


id: CL:3028
description: Mixed, incl. ABC-2 family transporter protein, and Class I glutamine amidotransferase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:3028_Mixed,_incl._ABC-2_family_transporter_protein,_and_Class_I_glutamine_amidotransferase-like


id: CL:3038
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:3038_Mostly_uncharacterized,_incl._Endodeoxyribonuclease_activity,_and_Major_facilitator_superfamily_domain

description:
  Mostly uncharacterized, incl. Endodeoxyribonuclease activity, and Major facilitator superfamily domain


id: CL:3040
description: Mixed, incl. Endodeoxyribonuclease activity, and Major facilitator superfamily domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:3040_Mixed,_incl._Endodeoxyribonuclease_activity,_and_Major_facilitator_superfamily_domain


id: CL:3042
description: Major facilitator superfamily domain, and Ferric iron transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:3042_Major_facilitator_superfamily_domain,_and_Ferric_iron_transmembrane_transporter_activity


id: CL:3058
description: Mixed, incl. Nucleotidase activity, and Aminoacyl-tRNA editing domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:3058_Mixed,_incl._Nucleotidase_activity,_and_Aminoacyl-tRNA_editing_domain


id: CL:3072
description: Mixed, incl. RNA ligase activity, and Peptidyl-glutamine methylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:3072_Mixed,_incl._RNA_ligase_activity,_and_Peptidyl-glutamine_methylation


id: CL:3081
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:3081_Mixed,_incl._Transcription_regulator_AsnC/Lrp,_ligand_binding_domain,_and_Protein_of_unknown_function_DUF1285

description:
  Mixed, incl. Transcription regulator AsnC/Lrp, ligand binding domain, and Protein of unknown function DUF1285


id: CL:3082
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:3082_Mixed,_incl._Transcription_regulator_AsnC/Lrp,_ligand_binding_domain,_and_Calcineurin-like_phosphoesterase_domain,_ApaH_type

description:
  Mixed, incl. Transcription regulator AsnC/Lrp, ligand binding domain, and Calcineurin-like phosphoesterase domain, ApaH type


id: CL:3093
description: Mixed, incl. Protein of unknown function DUF1285, and D-aminoacyl-tRNA deacylase-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:3093_Mixed,_incl._Protein_of_unknown_function_DUF1285,_and_D-aminoacyl-tRNA_deacylase-like_superfamily


id: CL:3105
description: Mixed, incl. Carbohydrate metabolic process, and Glycoprotein metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:3105_Mixed,_incl._Carbohydrate_metabolic_process,_and_Glycoprotein_metabolic_process


id: CL:3107
description: Mixed, incl. Carbohydrate metabolic process, and Glycoprotein metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:3107_Mixed,_incl._Carbohydrate_metabolic_process,_and_Glycoprotein_metabolic_process


id: CL:3108
description: Mixed, incl. Carbohydrate metabolic process, and Glycoprotein metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:3108_Mixed,_incl._Carbohydrate_metabolic_process,_and_Glycoprotein_metabolic_process


id: CL:3109
description: Mixed, incl. Polysaccharide metabolic process, and Amino sugar and nucleotide sugar metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:3109_Mixed,_incl._Polysaccharide_metabolic_process,_and_Amino_sugar_and_nucleotide_sugar_metabolism


id: CL:3111
description: Mixed, incl. Polysaccharide metabolic process, and Amino sugar and nucleotide sugar metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:3111_Mixed,_incl._Polysaccharide_metabolic_process,_and_Amino_sugar_and_nucleotide_sugar_metabolism


id: CL:3112
description: Mixed, incl. Polysaccharide metabolic process, and Amino sugar and nucleotide sugar metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:3112_Mixed,_incl._Polysaccharide_metabolic_process,_and_Amino_sugar_and_nucleotide_sugar_metabolism


id: CL:3114
description: Polysaccharide metabolic process, and Amino sugar and nucleotide sugar metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:3114_Polysaccharide_metabolic_process,_and_Amino_sugar_and_nucleotide_sugar_metabolism


id: CL:3115
description: O-Antigen nucleotide sugar biosynthesis, and Amino sugar and nucleotide sugar metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:3115_O-Antigen_nucleotide_sugar_biosynthesis,_and_Amino_sugar_and_nucleotide_sugar_metabolism


id: CL:3116
description: Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and Galactose metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:3116_Mixed,_incl._O-Antigen_nucleotide_sugar_biosynthesis,_and_Galactose_metabolic_process


id: CL:3118
description: O-Antigen nucleotide sugar biosynthesis, and Polysaccharide biosynthesis protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:3118_O-Antigen_nucleotide_sugar_biosynthesis,_and_Polysaccharide_biosynthesis_protein


id: CL:3121
description: Polyketide sugar unit biosynthesis, and UDP binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:3121_Polyketide_sugar_unit_biosynthesis,_and_UDP_binding_domain


id: CL:3150
description: Mixed, incl. Gfo/Idh/MocA-like oxidoreductase, N-terminal, and Glycosyl transferase 4-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:3150_Mixed,_incl._Gfo/Idh/MocA-like_oxidoreductase,_N-terminal,_and_Glycosyl_transferase_4-like_domain


id: CL:3159
description: Mixed, incl. MobA-like NTP transferase domain, and Alpha-D-phosphohexomutase, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:3159_Mixed,_incl._MobA-like_NTP_transferase_domain,_and_Alpha-D-phosphohexomutase,_C-terminal


id: CL:3161
description: Nucleotidyl transferase domain, and Capsule organization
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:3161_Nucleotidyl_transferase_domain,_and_Capsule_organization


id: CL:3184
description: Glycosyl transferases group 1, and Starch and sucrose metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:3184_Glycosyl_transferases_group_1,_and_Starch_and_sucrose_metabolism


id: CL:3186
description: Glycosyl transferases group 1, and Glycogen metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:3186_Glycosyl_transferases_group_1,_and_Glycogen_metabolism


id: CL:3188
description: Glycosyltransferase Family 4, and Glycosyl transferase 4-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:3188_Glycosyltransferase_Family_4,_and_Glycosyl_transferase_4-like


id: CL:3190
description: Peptidyl-asparagine modification, and O-Antigen ligase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:3190_Peptidyl-asparagine_modification,_and_O-Antigen_ligase


id: CL:3212
description: Glycogen biosynthesis, and Glycoside hydrolase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:3212_Glycogen_biosynthesis,_and_Glycoside_hydrolase_superfamily


id: CL:3229
description: Polysaccharide biosynthesis protein, and Glycosyltransferase Family 4
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:3229_Polysaccharide_biosynthesis_protein,_and_Glycosyltransferase_Family_4


id: CL:3244
description: Mixed, incl. Polysaccharide metabolic process, and Polysaccharide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:3244_Mixed,_incl._Polysaccharide_metabolic_process,_and_Polysaccharide_transport


id: CL:3245
description: Mixed, incl. Polysaccharide metabolic process, and Polysaccharide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:3245_Mixed,_incl._Polysaccharide_metabolic_process,_and_Polysaccharide_transport


id: CL:3247
description: Mixed, incl. Glycosyltransferase 2-like, and NodB homology domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:3247_Mixed,_incl._Glycosyltransferase_2-like,_and_NodB_homology_domain


id: CL:3249
description: Mixed, incl. Glycosyltransferase like family 2, and NodB homology domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:3249_Mixed,_incl._Glycosyltransferase_like_family_2,_and_NodB_homology_domain


id: CL:3252
description: Mixed, incl. Sulfotransferase family, and O-Antigen ligase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:3252_Mixed,_incl._Sulfotransferase_family,_and_O-Antigen_ligase


id: CL:3268
description: Mixed, incl. Glycosyl transferase 4-like domain, and BioF2-like, acetyltransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:3268_Mixed,_incl._Glycosyl_transferase_4-like_domain,_and_BioF2-like,_acetyltransferase_domain


id: CL:327
description: Proton-transporting ATP synthase complex, coupling factor F(o)
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:327_Proton-transporting_ATP_synthase_complex,_coupling_factor_F(o)


id: CL:3293
description: Mixed, incl. Vacuolar membrane, and Modulation by symbiont of host intracellular transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:3293_Mixed,_incl._Vacuolar_membrane,_and_Modulation_by_symbiont_of_host_intracellular_transport


id: CL:3296
description: Mixed, incl. Vacuolar membrane, and Polysaccharide export protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:3296_Mixed,_incl._Vacuolar_membrane,_and_Polysaccharide_export_protein


id: CL:3298
description: Mixed, incl. Exosortase, and Polysaccharide export protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:3298_Mixed,_incl._Exosortase,_and_Polysaccharide_export_protein


id: CL:3330
description: Mixed, incl. Glycosyltransferase subfamily 4-like, N-terminal domain, and VanZ like family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:3330_Mixed,_incl._Glycosyltransferase_subfamily_4-like,_N-terminal_domain,_and_VanZ_like_family


id: CL:3333
description: Glycosyl transferase 4-like domain, and Asparagine synthase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:3333_Glycosyl_transferase_4-like_domain,_and_Asparagine_synthase


id: CL:3351
description: Mixed, incl. Sulfotransferase domain, and Polysaccharide biosynthesis protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:3351_Mixed,_incl._Sulfotransferase_domain,_and_Polysaccharide_biosynthesis_protein


id: CL:3368
description: Mixed, incl. Asparagine synthase, and Glycosyl transferase 4-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:3368_Mixed,_incl._Asparagine_synthase,_and_Glycosyl_transferase_4-like


id: CL:3382
description: Mixed, incl. Glycerophospholipid metabolism, and DNA-binding HTH domain, TetR-type
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:3382_Mixed,_incl._Glycerophospholipid_metabolism,_and_DNA-binding_HTH_domain,_TetR-type


id: CL:3384
description: Mixed, incl. Glycerophospholipid metabolism, and Acid phosphatase homologues
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:3384_Mixed,_incl._Glycerophospholipid_metabolism,_and_Acid_phosphatase_homologues


id: CL:3385
description: Mixed, incl. Acid phosphatase homologues, and ABC-2 family transporter protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:3385_Mixed,_incl._Acid_phosphatase_homologues,_and_ABC-2_family_transporter_protein


id: CL:3388
description: Acid phosphatase homologues, and Aminoacyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:3388_Acid_phosphatase_homologues,_and_Aminoacyltransferase_activity


id: CL:339
description: SRP54-type protein, helical bundle domain, and Protein-transporting ATPase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:339_SRP54-type_protein,_helical_bundle_domain,_and_Protein-transporting_ATPase_activity


id: CL:3405
description: Mixed, incl. Patatin-like phospholipase, and Zymogen
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:3405_Mixed,_incl._Patatin-like_phospholipase,_and_Zymogen


id: CL:3428
description: Mixed, incl. DNA-binding HTH domain, TetR-type, and Glycerolipid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:3428_Mixed,_incl._DNA-binding_HTH_domain,_TetR-type,_and_Glycerolipid_metabolism


id: CL:3430
description: Mixed, incl. Glycerolipid metabolism, and Propionate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:3430_Mixed,_incl._Glycerolipid_metabolism,_and_Propionate_metabolic_process


id: CL:3446
description: DNA-binding HTH domain, TetR-type
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:3446_DNA-binding_HTH_domain,_TetR-type


id: CL:3456
description: Mixed, incl. DUS-like, FMN-binding domain, and ParB/Sulfiredoxin domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:3456_Mixed,_incl._DUS-like,_FMN-binding_domain,_and_ParB/Sulfiredoxin_domain


id: CL:3475
description: Mixed, incl. NAD(+) synthetase, and Antioxidant activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:3475_Mixed,_incl._NAD(+)_synthetase,_and_Antioxidant_activity


id: CL:3489
description: Mixed, incl. Extracellular polysaccharide metabolic process, and Regulation of signaling
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:3489_Mixed,_incl._Extracellular_polysaccharide_metabolic_process,_and_Regulation_of_signaling


id: CL:3491
description: Tetratricopeptide repeat, and Extracellular polysaccharide metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:3491_Tetratricopeptide_repeat,_and_Extracellular_polysaccharide_metabolic_process


id: CL:3533
description: Signaling, and Bacterial chemotaxis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:3533_Signaling,_and_Bacterial_chemotaxis


id: CL:3535
description: Signaling, and Nucleotide cyclase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:3535_Signaling,_and_Nucleotide_cyclase


id: CL:3537
description: Signaling, and Nucleotide cyclase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:3537_Signaling,_and_Nucleotide_cyclase


id: CL:3540
description: Signaling, and Nucleotide cyclase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:3540_Signaling,_and_Nucleotide_cyclase


id: CL:3542
description: Signaling, and Nucleotide cyclase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:3542_Signaling,_and_Nucleotide_cyclase


id: CL:356
description: tRNA (guanine) methyltransferase activity, and KH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:356_tRNA_(guanine)_methyltransferase_activity,_and_KH_domain


id: CL:3561
description: Histidine kinase domain, and Transcriptional regulatory protein WalR-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:3561_Histidine_kinase_domain,_and_Transcriptional_regulatory_protein_WalR-like


id: CL:3564
description: Histidine kinase domain, and Transcriptional regulatory protein WalR-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:3564_Histidine_kinase_domain,_and_Transcriptional_regulatory_protein_WalR-like


id: CL:3567
description: PAS domain, and Signal transduction response regulator, receiver domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:3567_PAS_domain,_and_Signal_transduction_response_regulator,_receiver_domain


id: CL:3571
description: PAS domain, and Signal transduction response regulator, receiver domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:3571_PAS_domain,_and_Signal_transduction_response_regulator,_receiver_domain


id: CL:3574
description: PAS domain, and Protein serine/threonine phosphatase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:3574_PAS_domain,_and_Protein_serine/threonine_phosphatase_activity


id: CL:3578
description: His Kinase A (phosphoacceptor) domain, and Protein serine/threonine phosphatase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:3578_His_Kinase_A_(phosphoacceptor)_domain,_and_Protein_serine/threonine_phosphatase_activity


id: CL:3581
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:3581_Signal_transduction_histidine_kinase,_dimerisation/phosphoacceptor_domain,_and_Protein_serine/threonine_phosphatase_activity

description:
  Signal transduction histidine kinase, dimerisation/phosphoacceptor domain, and Protein serine/threonine phosphatase activity


id: CL:3584
description: PAC motif, and Signal transduction histidine kinase, dimerisation/phosphoacceptor domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:3584_PAC_motif,_and_Signal_transduction_histidine_kinase,_dimerisation/phosphoacceptor_domain


id: CL:3586
description: PAC motif, and Chemotaxis protein CheW
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:3586_PAC_motif,_and_Chemotaxis_protein_CheW


id: CL:3589
description: PAC motif, and Chemotaxis protein CheW
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:3589_PAC_motif,_and_Chemotaxis_protein_CheW


id: CL:3601
description: Signal transduction histidine kinase, dimerisation/phosphoacceptor domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:3601_Signal_transduction_histidine_kinase,_dimerisation/phosphoacceptor_domain


id: CL:3616
description: Protein serine/threonine phosphatase activity, and PAS fold-3
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:3616_Protein_serine/threonine_phosphatase_activity,_and_PAS_fold-3


id: CL:366
description: Mixed, incl. Maturation of SSU-rRNA, and tRNA pseudouridine synthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:366_Mixed,_incl._Maturation_of_SSU-rRNA,_and_tRNA_pseudouridine_synthesis


id: CL:3694
description: Protein-glutamine glutaminase activity, and Single Cache domain 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:3694_Protein-glutamine_glutaminase_activity,_and_Single_Cache_domain_2


id: CL:3739
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:3739_Mixed,_incl._DNA-binding_transcription_activator_activity,_and_Calcineurin-like_phosphoesterase_domain,_ApaH_type

description:
  Mixed, incl. DNA-binding transcription activator activity, and Calcineurin-like phosphoesterase domain, ApaH type


id: CL:3774
description: Diguanylate cyclase, and HD-GYP domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:3774_Diguanylate_cyclase,_and_HD-GYP_domain


id: CL:3801
description: Sigma-54 interaction domain, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:3801_Sigma-54_interaction_domain,_conserved_site


id: CL:3806
description: Sigma-54 interaction domain, ATP-binding site 2, and DNA-binding transcription activator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:3806_Sigma-54_interaction_domain,_ATP-binding_site_2,_and_DNA-binding_transcription_activator_activity


id: CL:385
description: tRNA aminoacylation, and glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:385_tRNA_aminoacylation,_and_glutaminyl-tRNA_synthase_(glutamine-hydrolyzing)_activity


id: CL:3850
description: Cilium, and Bacterial-type flagellum organization
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:3850_Cilium,_and_Bacterial-type_flagellum_organization


id: CL:3853
description: Cilium, and Motility protein B-like, N-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:3853_Cilium,_and_Motility_protein_B-like,_N-terminal_domain


id: CL:3858
description: Bacterial-type flagellum basal body, and Bacterial flagellum biogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:3858_Bacterial-type_flagellum_basal_body,_and_Bacterial_flagellum_biogenesis


id: CL:3859
description: Bacterial-type flagellum basal body
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:3859_Bacterial-type_flagellum_basal_body


id: CL:3861
description: Flagella basal body rod protein, and Bacterial-type flagellum basal body, distal rod
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:3861_Flagella_basal_body_rod_protein,_and_Bacterial-type_flagellum_basal_body,_distal_rod


id: CL:3877
description: Cytoskeletal motor activity, and Protein secretion by the type III secretion system
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:3877_Cytoskeletal_motor_activity,_and_Protein_secretion_by_the_type_III_secretion_system


id: CL:3889
description: Bacterial flagellum protein export, and Bacterial-type flagellum assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:3889_Bacterial_flagellum_protein_export,_and_Bacterial-type_flagellum_assembly


id: CL:391
description: Aminoacyl-tRNA synthetase, class I, conserved site, and tRNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:391_Aminoacyl-tRNA_synthetase,_class_I,_conserved_site,_and_tRNA-binding_domain


id: CL:3912
description: Secreted, and Flagellar protein FliS
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:3912_Secreted,_and_Flagellar_protein_FliS


id: CL:3960
description: Mixed, incl. Phosphoenolpyruvate synthase, and Sulfite exporter TauE/SafE
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:3960_Mixed,_incl._Phosphoenolpyruvate_synthase,_and_Sulfite_exporter_TauE/SafE


id: CL:3978
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:3978_Mixed,_incl._Regulation_of_bacterial-type_flagellum-dependent_cell_motility,_and_Peptidyl-histidine_modification

description:
  Mixed, incl. Regulation of bacterial-type flagellum-dependent cell motility, and Peptidyl-histidine modification


id: CL:3993
description: Metal-dependent hydrolase HDOD, and EamA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:3993_Metal-dependent_hydrolase_HDOD,_and_EamA_domain


id: CL:4014
description: Mixed, incl. Protein of unknown function DUF1566, and C-type lectin fold
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4014_Mixed,_incl._Protein_of_unknown_function_DUF1566,_and_C-type_lectin_fold


id: CL:4031
description: Mixed, incl. CBS domain, and Sequence-specific DNA binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4031_Mixed,_incl._CBS_domain,_and_Sequence-specific_DNA_binding


id: CL:4048
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4048_Mixed,_incl._Sigma-54_interaction_domain,_ATP-binding_site_2,_and_Cationic_antimicrobial_peptide_(CAMP)_resistance

description:
  Mixed, incl. Sigma-54 interaction domain, ATP-binding site 2, and Cationic antimicrobial peptide (CAMP) resistance


id: CL:4070
description: Mixed, incl. Regulation of nitrogen utilization, and Nucleoplasm
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4070_Mixed,_incl._Regulation_of_nitrogen_utilization,_and_Nucleoplasm


id: CL:4073
description: Regulation of nitrogen utilization, and [protein-PII] uridylyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4073_Regulation_of_nitrogen_utilization,_and_[protein-PII]_uridylyltransferase_activity


id: CL:409
description: Mixed, incl. glycyl-tRNA aminoacylation, and Leucyl-tRNA synthetase, Domain 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:409_Mixed,_incl._glycyl-tRNA_aminoacylation,_and_Leucyl-tRNA_synthetase,_Domain_2


id: CL:4097
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4097_Mixed,_incl._Organic_phosphonate_metabolic_process,_and_Inorganic_phosphate_transmembrane_transporter_activity

description:
  Mixed, incl. Organic phosphonate metabolic process, and Inorganic phosphate transmembrane transporter activity


id: CL:4098
description: Mixed, incl. Inorganic phosphate transmembrane transporter activity, and Phosphate ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4098_Mixed,_incl._Inorganic_phosphate_transmembrane_transporter_activity,_and_Phosphate_ion_transport


id: CL:4100
description: Inorganic phosphate transmembrane transporter activity, and Phosphate ion binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4100_Inorganic_phosphate_transmembrane_transporter_activity,_and_Phosphate_ion_binding


id: CL:4102
description: Phosphate ion transport, and Inorganic phosphate transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4102_Phosphate_ion_transport,_and_Inorganic_phosphate_transmembrane_transporter_activity


id: CL:4124
description: Mixed, incl. 3-5-exoribonuclease activity, and Protein-exporting ATPase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4124_Mixed,_incl._3-5-exoribonuclease_activity,_and_Protein-exporting_ATPase_activity


id: CL:4134
description: Organic phosphonate metabolic process, and ABC-type phosphonate transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4134_Organic_phosphonate_metabolic_process,_and_ABC-type_phosphonate_transporter_activity


id: CL:4137
description: Organic phosphonate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4137_Organic_phosphonate_metabolic_process


id: CL:4169
description: Mixed, incl. Lipopolysaccharide biosynthesis, and beta-Lactam resistance
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4169_Mixed,_incl._Lipopolysaccharide_biosynthesis,_and_beta-Lactam_resistance


id: CL:4170
description: Mixed, incl. Lipopolysaccharide biosynthesis, and beta-Lactam resistance
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4170_Mixed,_incl._Lipopolysaccharide_biosynthesis,_and_beta-Lactam_resistance


id: CL:4171
description: Mixed, incl. Lipopolysaccharide biosynthesis, and beta-Lactam resistance
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4171_Mixed,_incl._Lipopolysaccharide_biosynthesis,_and_beta-Lactam_resistance


id: CL:4172
description: Mixed, incl. Lipopolysaccharide biosynthesis, and Membrane organization
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4172_Mixed,_incl._Lipopolysaccharide_biosynthesis,_and_Membrane_organization


id: CL:4173
description: Mixed, incl. Lipopolysaccharide biosynthesis, and Membrane assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4173_Mixed,_incl._Lipopolysaccharide_biosynthesis,_and_Membrane_assembly


id: CL:4175
description: Mixed, incl. Membrane assembly, and Outer membrane protein, bacterial
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4175_Mixed,_incl._Membrane_assembly,_and_Outer_membrane_protein,_bacterial


id: CL:4176
description: Mixed, incl. Outer membrane protein, bacterial, and Protein insertion into membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4176_Mixed,_incl._Outer_membrane_protein,_bacterial,_and_Protein_insertion_into_membrane


id: CL:4178
description: Bacteriocin transport, and Periplasm
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4178_Bacteriocin_transport,_and_Periplasm


id: CL:4202
description: Permease LptG/LptF-related, and Lipopolysaccharide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4202_Permease_LptG/LptF-related,_and_Lipopolysaccharide_transport


id: CL:4221
description: Lipopolysaccharide biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4221_Lipopolysaccharide_biosynthesis


id: CL:4223
description: Lipid A biosynthesis, and Lipopolysaccharide biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4223_Lipid_A_biosynthesis,_and_Lipopolysaccharide_biosynthesis


id: CL:4225
description: Kdo transferase activity, and Lipid A biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4225_Kdo_transferase_activity,_and_Lipid_A_biosynthesis


id: CL:423
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:423_glutaminyl-tRNA_synthase_(glutamine-hydrolyzing)_activity,_and_Aspartyl/Asparaginyl-tRNA_synthetase,_class_IIb

description:
  glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity, and Aspartyl/Asparaginyl-tRNA synthetase, class IIb


id: CL:4253
description: Mixed, incl. Glycosyl transferase, family 9, and Phosphomethylpyrimidine kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4253_Mixed,_incl._Glycosyl_transferase,_family_9,_and_Phosphomethylpyrimidine_kinase


id: CL:4264
description: Mixed, incl. Lipoprotein localisation LolA/LolB/LppX, and MEMO1 family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4264_Mixed,_incl._Lipoprotein_localisation_LolA/LolB/LppX,_and_MEMO1_family


id: CL:4274
description: Mixed, incl. Efflux transmembrane transporter activity, and HlyD family secretion protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4274_Mixed,_incl._Efflux_transmembrane_transporter_activity,_and_HlyD_family_secretion_protein


id: CL:4275
description: Efflux transmembrane transporter activity, and HlyD family secretion protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4275_Efflux_transmembrane_transporter_activity,_and_HlyD_family_secretion_protein


id: CL:4277
description: Efflux transmembrane transporter activity, and HlyD family secretion protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4277_Efflux_transmembrane_transporter_activity,_and_HlyD_family_secretion_protein


id: CL:4279
description: Efflux transmembrane transporter activity, and RND efflux pump, membrane fusion protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4279_Efflux_transmembrane_transporter_activity,_and_RND_efflux_pump,_membrane_fusion_protein


id: CL:4281
description: Efflux transmembrane transporter activity, and RND efflux pump, membrane fusion protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4281_Efflux_transmembrane_transporter_activity,_and_RND_efflux_pump,_membrane_fusion_protein


id: CL:432
description: Mixed, incl. Ribosome biogenesis, and Ribonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:432_Mixed,_incl._Ribosome_biogenesis,_and_Ribonuclease_activity


id: CL:4322
description: ABC3 transporter permease protein domain, and MacB, ATP-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4322_ABC3_transporter_permease_protein_domain,_and_MacB,_ATP-binding_domain


id: CL:433
description: RNA degradation, and NUDIX hydrolase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:433_RNA_degradation,_and_NUDIX_hydrolase_domain


id: CL:4336
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4336_Mixed,_incl._Tetracycline_resistance_protein_TetA/multidrug_resistance_protein_MdtG,_and_Xenobiotic_transmembrane_transporter_activity

description:
  Mixed, incl. Tetracycline resistance protein TetA/multidrug resistance protein MdtG, and Xenobiotic transmembrane transporter activity


id: CL:435
description: Mixed, incl. 3-5 exonuclease, and RNA helicase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:435_Mixed,_incl._3-5_exonuclease,_and_RNA_helicase_activity


id: CL:4351
description: Mannosylation, and lipid-A-disaccharide synthase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4351_Mannosylation,_and_lipid-A-disaccharide_synthase_activity


id: CL:4363
description: Mixed, incl. Phospholipid transport, and MPN domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4363_Mixed,_incl._Phospholipid_transport,_and_MPN_domain


id: CL:4364
description: Phospholipid transport, and MPN domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4364_Phospholipid_transport,_and_MPN_domain


id: CL:4384
description: Mixed, incl. MPN domain, and PUA domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4384_Mixed,_incl._MPN_domain,_and_PUA_domain_superfamily


id: CL:4393
description: Mostly uncharacterized, incl. Flavoprotein, and Clp protease
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4393_Mostly_uncharacterized,_incl._Flavoprotein,_and_Clp_protease


id: CL:4395
description: Mixed, incl. Flavoprotein, and Nitroreductase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4395_Mixed,_incl._Flavoprotein,_and_Nitroreductase


id: CL:4416
description: Mixed, incl. ParM-like, and cAMP metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4416_Mixed,_incl._ParM-like,_and_cAMP_metabolic_process


id: CL:4418
description: Mixed, incl. cAMP metabolic process, and ParM-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4418_Mixed,_incl._cAMP_metabolic_process,_and_ParM-like


id: CL:4439
description: Mixed, incl. Pantothenate biosynthetic process, and Coenzyme A biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4439_Mixed,_incl._Pantothenate_biosynthetic_process,_and_Coenzyme_A_biosynthesis


id: CL:4440
description: Mixed, incl. Pantothenate biosynthetic process, and Coenzyme A biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4440_Mixed,_incl._Pantothenate_biosynthetic_process,_and_Coenzyme_A_biosynthesis


id: CL:4442
description: Pantothenate biosynthetic process, and Coenzyme A biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4442_Pantothenate_biosynthetic_process,_and_Coenzyme_A_biosynthesis


id: CL:4444
description: Pantothenate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4444_Pantothenate_biosynthetic_process


id: CL:4466
description: Mixed, incl. Uncharacterised ArCR, COG2043, and dephospho-CoA kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4466_Mixed,_incl._Uncharacterised_ArCR,_COG2043,_and_dephospho-CoA_kinase_activity


id: CL:4476
description: Mixed, incl. NUDIX domain, and ROS/MUCR transcriptional regulator
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4476_Mixed,_incl._NUDIX_domain,_and_ROS/MUCR_transcriptional_regulator


id: CL:4493
description: Mixed, incl. Prosthetic group metabolic process, and Aldehyde ferredoxin oxidoreductase, domain 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4493_Mixed,_incl._Prosthetic_group_metabolic_process,_and_Aldehyde_ferredoxin_oxidoreductase,_domain_2


id: CL:4496
description: Prosthetic group metabolic process, and Aldehyde ferredoxin oxidoreductase, domain 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4496_Prosthetic_group_metabolic_process,_and_Aldehyde_ferredoxin_oxidoreductase,_domain_2


id: CL:4498
description: Prosthetic group metabolic process, and Aldehyde ferredoxin oxidoreductase, domain 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4498_Prosthetic_group_metabolic_process,_and_Aldehyde_ferredoxin_oxidoreductase,_domain_2


id: CL:4501
description: Prosthetic group metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4501_Prosthetic_group_metabolic_process


id: CL:4503
description: Molybdenum cofactor biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4503_Molybdenum_cofactor_biosynthesis


id: CL:4505
description: Molybdenum cofactor biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4505_Molybdenum_cofactor_biosynthesis


id: CL:4535
description: Aldehyde ferredoxin oxidoreductase, domain 2, and PBP domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4535_Aldehyde_ferredoxin_oxidoreductase,_domain_2,_and_PBP_domain


id: CL:4557
description: Mixed, incl. Thiamine diphosphate metabolic process, and Domain of unknown function
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4557_Mixed,_incl._Thiamine_diphosphate_metabolic_process,_and_Domain_of_unknown_function


id: CL:456
description: Mixed, incl. Pseudouridine synthase, RluA-like, conserved site, and RNA (guanine-N7)-methylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:456_Mixed,_incl._Pseudouridine_synthase,_RluA-like,_conserved_site,_and_RNA_(guanine-N7)-methylation


id: CL:4560
description: Thiamine diphosphate metabolic process, and PIN domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4560_Thiamine_diphosphate_metabolic_process,_and_PIN_domain


id: CL:457
description: Mixed, incl. RNA (guanine-N7)-methylation, and RNA 5-end processing
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:457_Mixed,_incl._RNA_(guanine-N7)-methylation,_and_RNA_5-end_processing


id: CL:4594
description: Queuosine metabolic process, and SNARE associated Golgi protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4594_Queuosine_metabolic_process,_and_SNARE_associated_Golgi_protein


id: CL:4596
description: Queuosine biosynthesis, and Hydro-lyase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4596_Queuosine_biosynthesis,_and_Hydro-lyase_activity


id: CL:4626
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4626_Mostly_uncharacterized,_incl._Dinitrogenase_iron-molybdenum_cofactor_biosynthesis_superfamily,_and_CobQ/CobB/MinD/ParA_nucleotide_binding_domain

description:
  Mostly uncharacterized, incl. Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily, and CobQ/CobB/MinD/ParA nucleotide binding domain


id: CL:4627
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4627_Mixed,_incl._Dinitrogenase_iron-molybdenum_cofactor_biosynthesis_superfamily,_and_CobQ/CobB/MinD/ParA_nucleotide_binding_domain

description:
  Mixed, incl. Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily, and CobQ/CobB/MinD/ParA nucleotide binding domain


id: CL:4628
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4628_Mixed,_incl._Dinitrogenase_iron-molybdenum_cofactor_biosynthesis_superfamily,_and_CobQ/CobB/MinD/ParA_nucleotide_binding_domain

description:
  Mixed, incl. Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily, and CobQ/CobB/MinD/ParA nucleotide binding domain


id: CL:4630
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4630_Mixed,_incl._Dinitrogenase_iron-molybdenum_cofactor_biosynthesis_superfamily,_and_CobQ/CobB/MinD/ParA_nucleotide_binding_domain

description:
  Mixed, incl. Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily, and CobQ/CobB/MinD/ParA nucleotide binding domain


id: CL:4634
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4634_Dinitrogenase_iron-molybdenum_cofactor_biosynthesis_superfamily,_and_CobQ/CobB/MinD/ParA_nucleotide_binding_domain

description:
  Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily, and CobQ/CobB/MinD/ParA nucleotide binding domain


id: CL:4654
description: Mixed, incl. Predicted permease, and HTH ArsR-type DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4654_Mixed,_incl._Predicted_permease,_and_HTH_ArsR-type_DNA-binding_domain


id: CL:4664
description: Mixed, incl. HIT-like domain, and ApbE-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4664_Mixed,_incl._HIT-like_domain,_and_ApbE-like_superfamily


id: CL:4676
description: Mostly uncharacterized, incl. DJ-1/PfpI, and Lon protease (S16) C-terminal proteolytic domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4676_Mostly_uncharacterized,_incl._DJ-1/PfpI,_and_Lon_protease_(S16)_C-terminal_proteolytic_domain


id: CL:4678
description: Mixed, incl. DJ-1/PfpI, and Peptidase U32
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4678_Mixed,_incl._DJ-1/PfpI,_and_Peptidase_U32


id: CL:469
description: rRNA pseudouridine synthesis, and 50S ribosomal protein L30e-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:469_rRNA_pseudouridine_synthesis,_and_50S_ribosomal_protein_L30e-like


id: CL:4690
description: Mixed, incl. Lon protease (S16) C-terminal proteolytic domain, and RNA-binding protein KhpA
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4690_Mixed,_incl._Lon_protease_(S16)_C-terminal_proteolytic_domain,_and_RNA-binding_protein_KhpA


id: CL:4699
description: Mixed, incl. Flavoprotein-like superfamily, and Cellular detoxification
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4699_Mixed,_incl._Flavoprotein-like_superfamily,_and_Cellular_detoxification


id: CL:4700
description: Mostly uncharacterized, incl. Cellular detoxification, and Flavoprotein-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4700_Mostly_uncharacterized,_incl._Cellular_detoxification,_and_Flavoprotein-like_superfamily


id: CL:4701
description: Mixed, incl. Cellular detoxification, and Flavodoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4701_Mixed,_incl._Cellular_detoxification,_and_Flavodoxin


id: CL:4702
description: Mixed, incl. Flavodoxin, and Cellular detoxification
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4702_Mixed,_incl._Flavodoxin,_and_Cellular_detoxification


id: CL:4703
description: Mostly uncharacterized, incl. AhpC/TSA family, and FMN-binding split barrel
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4703_Mostly_uncharacterized,_incl._AhpC/TSA_family,_and_FMN-binding_split_barrel


id: CL:4704
description: Mixed, incl. AhpC/TSA family, and FMN-binding split barrel
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4704_Mixed,_incl._AhpC/TSA_family,_and_FMN-binding_split_barrel


id: CL:4706
description: AhpC/TSA family, and FMN-binding split barrel
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4706_AhpC/TSA_family,_and_FMN-binding_split_barrel


id: CL:4716
description: Mixed, incl. Transcription regulator IclR, N-terminal, and ABC transporter, BtuC-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4716_Mixed,_incl._Transcription_regulator_IclR,_N-terminal,_and_ABC_transporter,_BtuC-like


id: CL:4725
description: Mixed, incl. Six-hairpin glycosidase superfamily, and Flavodoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4725_Mixed,_incl._Six-hairpin_glycosidase_superfamily,_and_Flavodoxin


id: CL:4737
description: Mixed, incl. Ferritin-like diiron domain, and Rubredoxin-oxygen oxidoreductase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4737_Mixed,_incl._Ferritin-like_diiron_domain,_and_Rubredoxin-oxygen_oxidoreductase


id: CL:4739
description: Mixed, incl. Redoxin, and DJ-1/PfpI
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4739_Mixed,_incl._Redoxin,_and_DJ-1/PfpI


id: CL:4751
description: Aerobic electron transport chain, and Rubredoxin-oxygen oxidoreductase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4751_Aerobic_electron_transport_chain,_and_Rubredoxin-oxygen_oxidoreductase


id: CL:4766
description: Mixed, incl. Carotenoid biosynthetic process, and Lipoprotein transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4766_Mixed,_incl._Carotenoid_biosynthetic_process,_and_Lipoprotein_transport


id: CL:4780
description: Mixed, incl. EamA domain, and Organic cation transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4780_Mixed,_incl._EamA_domain,_and_Organic_cation_transport


id: CL:4781
description: Mixed, incl. EamA domain, and Organic cation transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4781_Mixed,_incl._EamA_domain,_and_Organic_cation_transport


id: CL:4783
description: Organic cation transport, and MetI-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4783_Organic_cation_transport,_and_MetI-like_superfamily


id: CL:479
description: Mixed, incl. ELP3/YhcC, and GTP-binding protein Era
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:479_Mixed,_incl._ELP3/YhcC,_and_GTP-binding_protein_Era


id: CL:4812
description: Mixed, incl. Neutral amino acid transport, and Sigma-70, region 4
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4812_Mixed,_incl._Neutral_amino_acid_transport,_and_Sigma-70,_region_4


id: CL:4823
description: Mixed, incl. NADPH-dependent FMN reductase-like, and PrkA AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4823_Mixed,_incl._NADPH-dependent_FMN_reductase-like,_and_PrkA_AAA_domain


id: CL:4824
description: Mixed, incl. NADPH-dependent FMN reductase-like, and PrkA AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4824_Mixed,_incl._NADPH-dependent_FMN_reductase-like,_and_PrkA_AAA_domain


id: CL:4825
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4825_Mixed,_incl._NADPH-dependent_FMN_reductase-like,_and_ATPase-coupled_lipid_transmembrane_transporter_activity

description:
  Mixed, incl. NADPH-dependent FMN reductase-like, and ATPase-coupled lipid transmembrane transporter activity


id: CL:4827
description: Mixed, incl. ATPase-coupled lipid transmembrane transporter activity, and Queuosine salvage
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4827_Mixed,_incl._ATPase-coupled_lipid_transmembrane_transporter_activity,_and_Queuosine_salvage


id: CL:4847
description: PrkA AAA domain, and PIN domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4847_PrkA_AAA_domain,_and_PIN_domain


id: CL:4858
description: Mixed, incl. NADPH-dependent FMN reductase, and Crp-type HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4858_Mixed,_incl._NADPH-dependent_FMN_reductase,_and_Crp-type_HTH_domain


id: CL:4878
description: Mixed, incl. Universal stress protein A family, and Long-chain fatty acid transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4878_Mixed,_incl._Universal_stress_protein_A_family,_and_Long-chain_fatty_acid_transporter_activity


id: CL:4879
description: Mixed, incl. Universal stress protein A family, and Radical SAM superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4879_Mixed,_incl._Universal_stress_protein_A_family,_and_Radical_SAM_superfamily


id: CL:4880
description: Mixed, incl. Universal stress protein A family, and Carnitine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4880_Mixed,_incl._Universal_stress_protein_A_family,_and_Carnitine_metabolic_process


id: CL:4891
description: Mixed, incl. Radical SAM superfamily, and Sulfite exporter TauE/SafE
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4891_Mixed,_incl._Radical_SAM_superfamily,_and_Sulfite_exporter_TauE/SafE


id: CL:4901
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4901_Mixed,_incl._6-O-methylguanine_DNA_methyltransferase,_DNA_binding_domain,_and_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen

description:
  Mixed, incl. 6-O-methylguanine DNA methyltransferase, DNA binding domain, and Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen


id: CL:4919
description: Mixed, incl. Glutathione metabolism, and C4-dicarboxylate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4919_Mixed,_incl._Glutathione_metabolism,_and_C4-dicarboxylate_transport


id: CL:4920
description: Mixed, incl. Glutathione metabolism, and C4-dicarboxylate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4920_Mixed,_incl._Glutathione_metabolism,_and_C4-dicarboxylate_transport


id: CL:4922
description: Glutathione metabolism, and Peptidase M28
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4922_Glutathione_metabolism,_and_Peptidase_M28


id: CL:4923
description: Glutathione metabolic process, and Metalloexopeptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4923_Glutathione_metabolic_process,_and_Metalloexopeptidase_activity


id: CL:4925
description: Metalloexopeptidase activity, and Glutathione synthase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4925_Metalloexopeptidase_activity,_and_Glutathione_synthase_activity


id: CL:4942
description: Cyclophilin-like domain superfamily, and Transcription regulator IclR, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4942_Cyclophilin-like_domain_superfamily,_and_Transcription_regulator_IclR,_N-terminal


id: CL:4958
description: C4-dicarboxylate transport, and TRAP transporter solute receptor DctP
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4958_C4-dicarboxylate_transport,_and_TRAP_transporter_solute_receptor_DctP


id: CL:4959
description: Solute binding protein, TakP-like, and C4-dicarboxylate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4959_Solute_binding_protein,_TakP-like,_and_C4-dicarboxylate_transport


id: CL:496
description: Mixed, incl. Protein folding, and Macromolecule catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:496_Mixed,_incl._Protein_folding,_and_Macromolecule_catabolic_process


id: CL:4970
description: TRAP transporter solute receptor, DctP family, and C4-dicarboxylate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4970_TRAP_transporter_solute_receptor,_DctP_family,_and_C4-dicarboxylate_transport


id: CL:498
description: Mixed, incl. Protein folding, and Protein catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:498_Mixed,_incl._Protein_folding,_and_Protein_catabolic_process


id: CL:4981
description: Mostly uncharacterized, incl. HNH nuclease, and Sugar transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4981_Mostly_uncharacterized,_incl._HNH_nuclease,_and_Sugar_transport


id: CL:4983
description: Sugar transport, and ABC transporter, permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4983_Sugar_transport,_and_ABC_transporter,_permease


id: CL:4993
description: Mixed, incl. HNH nuclease, and Peptidase S1C, Do
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:4993_Mixed,_incl._HNH_nuclease,_and_Peptidase_S1C,_Do


id: CL:500
description: Protein folding, and Protein catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:500_Protein_folding,_and_Protein_catabolic_process


id: CL:5002
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5002_Mostly_uncharacterized,_incl._DDE_transposase_sub-family,_and_Siderophore_uptake_transmembrane_transporter_activity

description:
  Mostly uncharacterized, incl. DDE transposase sub-family, and Siderophore uptake transmembrane transporter activity


id: CL:5004
description: Mixed, incl. DDE transposase sub-family, and Siderophore uptake transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5004_Mixed,_incl._DDE_transposase_sub-family,_and_Siderophore_uptake_transmembrane_transporter_activity


id: CL:5005
description: Mixed, incl. Siderophore uptake transmembrane transporter activity, and Ion channel
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5005_Mixed,_incl._Siderophore_uptake_transmembrane_transporter_activity,_and_Ion_channel


id: CL:5008
description: Mixed, incl. Ion channel, and Identical protein binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5008_Mixed,_incl._Ion_channel,_and_Identical_protein_binding


id: CL:501
description: Protein folding, and Proteolysis involved in protein catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:501_Protein_folding,_and_Proteolysis_involved_in_protein_catabolic_process


id: CL:502
description: Protein folding, and Proteolysis involved in protein catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:502_Protein_folding,_and_Proteolysis_involved_in_protein_catabolic_process


id: CL:5021
description: Siderophore uptake transmembrane transporter activity, and MreB/Mbl protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5021_Siderophore_uptake_transmembrane_transporter_activity,_and_MreB/Mbl_protein


id: CL:5031
description: DDE transposase sub-family, and DNA integration
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5031_DDE_transposase_sub-family,_and_DNA_integration


id: CL:5049
description: Mixed, incl. GIY-YIG endonuclease, and Methyltransferase small domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5049_Mixed,_incl._GIY-YIG_endonuclease,_and_Methyltransferase_small_domain


id: CL:506
description: Chaperone, and Allosteric enzyme
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:506_Chaperone,_and_Allosteric_enzyme


id: CL:5063
description: Mixed, incl. Bacterial secretion system, and Pilus organization
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5063_Mixed,_incl._Bacterial_secretion_system,_and_Pilus_organization


id: CL:5064
description: Mixed, incl. Bacterial secretion system, and Pilus organization
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5064_Mixed,_incl._Bacterial_secretion_system,_and_Pilus_organization


id: CL:5065
description: Bacterial secretion system, and Pilus organization
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5065_Bacterial_secretion_system,_and_Pilus_organization


id: CL:5066
description: Bacterial secretion system, and Pilus organization
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5066_Bacterial_secretion_system,_and_Pilus_organization


id: CL:5068
description: Mixed, incl. Type II/IV secretion system protein, and Pilin-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5068_Mixed,_incl._Type_II/IV_secretion_system_protein,_and_Pilin-like


id: CL:5069
description: Mixed, incl. Type II/IV secretion system protein, and Pilin-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5069_Mixed,_incl._Type_II/IV_secretion_system_protein,_and_Pilin-like


id: CL:507
description: Chaperonin Cpn60/GroEL, and GroES chaperonin family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:507_Chaperonin_Cpn60/GroEL,_and_GroES_chaperonin_family


id: CL:5071
description: Mixed, incl. Type II/IV secretion system protein, and GspF/PilC family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5071_Mixed,_incl._Type_II/IV_secretion_system_protein,_and_GspF/PilC_family


id: CL:5074
description: Mixed, incl. Pilus assembly, and GspD/PilQ family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5074_Mixed,_incl._Pilus_assembly,_and_GspD/PilQ_family


id: CL:5102
description: Horizontal gene transfer, and Magnesium chelatase ChlI-like, catalytic domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5102_Horizontal_gene_transfer,_and_Magnesium_chelatase_ChlI-like,_catalytic_domain


id: CL:5114
description: Mixed, incl. Prokaryotic N-terminal methylation site, and Pilus
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5114_Mixed,_incl._Prokaryotic_N-terminal_methylation_site,_and_Pilus


id: CL:5117
description: Prokaryotic N-terminal methylation site, and Pilus
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5117_Prokaryotic_N-terminal_methylation_site,_and_Pilus


id: CL:5134
description: Mixed, incl. GspD/PilQ family, and Pilus retraction protein PilT/PilU
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5134_Mixed,_incl._GspD/PilQ_family,_and_Pilus_retraction_protein_PilT/PilU


id: CL:5146
description: Mixed, incl. Transglutaminase-like, and Cobaltochelatase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5146_Mixed,_incl._Transglutaminase-like,_and_Cobaltochelatase_activity


id: CL:5155
description: Mixed, incl. ELP3/YhcC, and Peptidase U32
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5155_Mixed,_incl._ELP3/YhcC,_and_Peptidase_U32


id: CL:5164
description: Mostly uncharacterized, incl. L,D-transpeptidase catalytic domain, and Export from cell
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5164_Mostly_uncharacterized,_incl._L,D-transpeptidase_catalytic_domain,_and_Export_from_cell


id: CL:5165
description: Mostly uncharacterized, incl. L,D-transpeptidase catalytic domain, and Pfam phage integrase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5165_Mostly_uncharacterized,_incl._L,D-transpeptidase_catalytic_domain,_and_Pfam_phage_integrase_family


id: CL:5167
description: Mostly uncharacterized, incl. Pfam phage integrase family, and Fido domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5167_Mostly_uncharacterized,_incl._Pfam_phage_integrase_family,_and_Fido_domain


id: CL:5168
description: Mostly uncharacterized, incl. Nucleoside catabolic process, and DUS-like, FMN-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5168_Mostly_uncharacterized,_incl._Nucleoside_catabolic_process,_and_DUS-like,_FMN-binding_domain


id: CL:5170
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5170_Mixed,_incl._DUS-like,_FMN-binding_domain,_and_Oxidoreductase_activity,_acting_on_iron-sulfur_proteins_as_donors

description:
  Mixed, incl. DUS-like, FMN-binding domain, and Oxidoreductase activity, acting on iron-sulfur proteins as donors


id: CL:518
description: Chaperone DnaK, and DnaJ domain, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:518_Chaperone_DnaK,_and_DnaJ_domain,_conserved_site


id: CL:5184
description: Mixed, incl. Nucleoside catabolic process, and Regulation of protein transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5184_Mixed,_incl._Nucleoside_catabolic_process,_and_Regulation_of_protein_transport


id: CL:5197
description: Pfam phage integrase family, and Fido domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5197_Pfam_phage_integrase_family,_and_Fido_domain


id: CL:5212
description: L,D-transpeptidase catalytic domain, and ATP synthase I chain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5212_L,D-transpeptidase_catalytic_domain,_and_ATP_synthase_I_chain


id: CL:5224
description: Mixed, incl. Translocation and assembly module TamB, and ROS/MUCR transcriptional regulator
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5224_Mixed,_incl._Translocation_and_assembly_module_TamB,_and_ROS/MUCR_transcriptional_regulator


id: CL:5227
description: Mixed, incl. Translocation and assembly module TamB, and ROS/MUCR transcriptional regulator
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5227_Mixed,_incl._Translocation_and_assembly_module_TamB,_and_ROS/MUCR_transcriptional_regulator


id: CL:5247
description: Mixed, incl. RACo linker region, and UPF0759 superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5247_Mixed,_incl._RACo_linker_region,_and_UPF0759_superfamily


id: CL:5259
description: Mixed, incl. ABC transporters, and Tetrapyrrole biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5259_Mixed,_incl._ABC_transporters,_and_Tetrapyrrole_biosynthetic_process


id: CL:5260
description: Mixed, incl. MetI-like superfamily, and Oligopeptide/dipeptide ABC transporter, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5260_Mixed,_incl._MetI-like_superfamily,_and_Oligopeptide/dipeptide_ABC_transporter,_C-terminal


id: CL:5261
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5261_Latent_infection_-_Other_responses_of_Mtb_to_phagocytosis,_and_Oligopeptide/dipeptide_ABC_transporter,_C-terminal

description:
  Latent infection - Other responses of Mtb to phagocytosis, and Oligopeptide/dipeptide ABC transporter, C-terminal


id: CL:5262
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5262_Latent_infection_-_Other_responses_of_Mtb_to_phagocytosis,_and_Oligopeptide/dipeptide_ABC_transporter,_C-terminal

description:
  Latent infection - Other responses of Mtb to phagocytosis, and Oligopeptide/dipeptide ABC transporter, C-terminal


id: CL:5263
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5263_Mixed,_incl._Oligopeptide/dipeptide_ABC_transporter,_C-terminal,_and_Oligopeptide_transport_permease_C-like,_N-terminal_domain

description:
  Mixed, incl. Oligopeptide/dipeptide ABC transporter, C-terminal, and Oligopeptide transport permease C-like, N-terminal domain


id: CL:5264
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5264_Mixed,_incl._Oligopeptide_transport_permease_C-like,_N-terminal_domain,_and_Oligopeptide/dipeptide_ABC_transporter,_C-terminal

description:
  Mixed, incl. Oligopeptide transport permease C-like, N-terminal domain, and Oligopeptide/dipeptide ABC transporter, C-terminal


id: CL:5265
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5265_Mixed,_incl._Oligopeptide/dipeptide_ABC_transporter,_C-terminal,_and_Oligopeptide_transport_permease_C-like,_N-terminal_domain

description:
  Mixed, incl. Oligopeptide/dipeptide ABC transporter, C-terminal, and Oligopeptide transport permease C-like, N-terminal domain


id: CL:5266
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5266_Mixed,_incl._Oligopeptide_transport_permease_C-like,_N-terminal_domain,_and_Peptide/nickel_binding_protein,_MppA-type

description:
  Mixed, incl. Oligopeptide transport permease C-like, N-terminal domain, and Peptide/nickel binding protein, MppA-type


id: CL:5281
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5281_Oligopeptide/dipeptide_ABC_transporter,_C-terminal,_and_Oligopeptide_transport_permease_C-like,_N-terminal_domain

description:
  Oligopeptide/dipeptide ABC transporter, C-terminal, and Oligopeptide transport permease C-like, N-terminal domain


id: CL:5290
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5290_Oligopeptide_transport_permease_C-like,_N-terminal_domain,_and_Oligopeptide/dipeptide_ABC_transporter,_C-terminal

description:
  Oligopeptide transport permease C-like, N-terminal domain, and Oligopeptide/dipeptide ABC transporter, C-terminal


id: CL:5301
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5301_Oligopeptide/dipeptide_transporter,_C-terminal_region,_and_Solute-binding_protein_family_5,_conserved_site

description:
  Oligopeptide/dipeptide transporter, C-terminal region, and Solute-binding protein family 5, conserved site


id: CL:5310
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5310_Mixed,_incl._Twin-arginine_translocation_pathway,_signal_sequence,_bacterial/archaeal,_and_ABC_transporter_type_1,_GsiC-like,_N-terminal_domain

description:
  Mixed, incl. Twin-arginine translocation pathway, signal sequence, bacterial/archaeal, and ABC transporter type 1, GsiC-like, N-terminal domain


id: CL:5323
description: Mixed, incl. Phosphate transporter, and Protein of unknown function DUF47
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5323_Mixed,_incl._Phosphate_transporter,_and_Protein_of_unknown_function_DUF47


id: CL:5338
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5338_Mixed,_incl._Amino_acid_ABC_transporter,_permease_protein,_3-TM_domain,_and_ABC-type_transporter_activity

description:
  Mixed, incl. Amino acid ABC transporter, permease protein, 3-TM domain, and ABC-type transporter activity


id: CL:5339
description: Amino acid ABC transporter, permease protein, 3-TM domain, and Ligand-gated channel activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5339_Amino_acid_ABC_transporter,_permease_protein,_3-TM_domain,_and_Ligand-gated_channel_activity


id: CL:5341
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5341_Amino_acid_ABC_transporter,_permease_protein,_3-TM_domain,_and_ABC-type_amino_acid_transporter_activity

description:
  Amino acid ABC transporter, permease protein, 3-TM domain, and ABC-type amino acid transporter activity


id: CL:5343
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5343_Amino_acid_ABC_transporter,_permease_protein,_3-TM_domain,_and_ABC-type_amino_acid_transporter_activity

description:
  Amino acid ABC transporter, permease protein, 3-TM domain, and ABC-type amino acid transporter activity


id: CL:5380
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5380_Mixed,_incl._Molybdate/tungstate_binding,_C-terminal,_and_ABC-type_carbohydrate_transporter_activity

description:
  Mixed, incl. Molybdate/tungstate binding, C-terminal, and ABC-type carbohydrate transporter activity


id: CL:5382
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5382_Mixed,_incl._Molybdate/tungstate_binding,_C-terminal,_and_ABC-type_carbohydrate_transporter_activity

description:
  Mixed, incl. Molybdate/tungstate binding, C-terminal, and ABC-type carbohydrate transporter activity


id: CL:5384
description: ABC transporter, ferric cation import, FbpC, and ABC-type carbohydrate transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5384_ABC_transporter,_ferric_cation_import,_FbpC,_and_ABC-type_carbohydrate_transporter_activity


id: CL:5409
description: Mixed, incl. Tetrapyrrole biosynthetic process, and Iron ion homeostasis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5409_Mixed,_incl._Tetrapyrrole_biosynthetic_process,_and_Iron_ion_homeostasis


id: CL:5410
description: Tetrapyrrole biosynthetic process, and TAT protein transport complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5410_Tetrapyrrole_biosynthetic_process,_and_TAT_protein_transport_complex


id: CL:5411
description: Tetrapyrrole biosynthetic process, and ABC transporter, CbiO/EcfA subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5411_Tetrapyrrole_biosynthetic_process,_and_ABC_transporter,_CbiO/EcfA_subunit


id: CL:5412
description: Tetrapyrrole biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5412_Tetrapyrrole_biosynthetic_process


id: CL:5417
description: CobB/CobQ-like glutamine amidotransferase, and Threonine-phosphate decarboxylase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5417_CobB/CobQ-like_glutamine_amidotransferase,_and_Threonine-phosphate_decarboxylase_activity


id: CL:5436
description: Tetrapyrrole methylase, and Cobalamin metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5436_Tetrapyrrole_methylase,_and_Cobalamin_metabolic_process


id: CL:5467
description: Mixed, incl. ABC transporter, CbiO/EcfA subunit, and Cobalt transport protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5467_Mixed,_incl._ABC_transporter,_CbiO/EcfA_subunit,_and_Cobalt_transport_protein


id: CL:5470
description: Mixed, incl. Enzyme inhibitor activity, and Cobalt transport protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5470_Mixed,_incl._Enzyme_inhibitor_activity,_and_Cobalt_transport_protein


id: CL:5487
description: TAT protein transport complex, and Cytochrome complex assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5487_TAT_protein_transport_complex,_and_Cytochrome_complex_assembly


id: CL:5502
description: Mixed, incl. ABC transporter periplasmic binding domain, and GxxExxY protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5502_Mixed,_incl._ABC_transporter_periplasmic_binding_domain,_and_GxxExxY_protein


id: CL:5503
description: Mixed, incl. ABC transporter periplasmic binding domain, and GxxExxY protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5503_Mixed,_incl._ABC_transporter_periplasmic_binding_domain,_and_GxxExxY_protein


id: CL:5507
description: FecCD transport family, and Periplasmic binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5507_FecCD_transport_family,_and_Periplasmic_binding_protein


id: CL:551
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:551_Mixed,_incl._Aconitase_C-terminal_domain,_and_Oxidoreductase_activity,_acting_on_superoxide_radicals_as_acceptor

description:
  Mixed, incl. Aconitase C-terminal domain, and Oxidoreductase activity, acting on superoxide radicals as acceptor


id: CL:5525
description: Mixed, incl. TonB/TolA, C-terminal, and Integrin alpha, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5525_Mixed,_incl._TonB/TolA,_C-terminal,_and_Integrin_alpha,_N-terminal


id: CL:5544
description: Amino acid transport, and ABC transporter, permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5544_Amino_acid_transport,_and_ABC_transporter,_permease


id: CL:5545
description: Amino acid transport, and ABC transporter, permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5545_Amino_acid_transport,_and_ABC_transporter,_permease


id: CL:5548
description: Amino acid transport, and ABC transporter, permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5548_Amino_acid_transport,_and_ABC_transporter,_permease


id: CL:5549
description: Amino acid transport, and ABC transporter, permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5549_Amino_acid_transport,_and_ABC_transporter,_permease


id: CL:5550
description: Amino acid transport, and ABC transporter, permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5550_Amino_acid_transport,_and_ABC_transporter,_permease


id: CL:5551
description: Amino acid transport, and ABC transporter, permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5551_Amino_acid_transport,_and_ABC_transporter,_permease


id: CL:5552
description: Branched-chain amino acid transport, and Leucine-binding protein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5552_Branched-chain_amino_acid_transport,_and_Leucine-binding_protein_domain


id: CL:5553
description: Branched-chain amino acid transport, and Leucine-binding protein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5553_Branched-chain_amino_acid_transport,_and_Leucine-binding_protein_domain


id: CL:5554
description: Branched-chain amino acid transport, and Leucine binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5554_Branched-chain_amino_acid_transport,_and_Leucine_binding


id: CL:5555
description: Leu/Ile/Val-binding protein, and Branched-chain amino acid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5555_Leu/Ile/Val-binding_protein,_and_Branched-chain_amino_acid_transport


id: CL:5564
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5564_Mixed,_incl._High-affinity_branched-chain_amino_acid_transport_ATP-binding_protein,_and_Branched-chain_amino_acid_ATP-binding_cassette_transporter

description:
  Mixed, incl. High-affinity branched-chain amino acid transport ATP-binding protein, and Branched-chain amino acid ATP-binding cassette transporter


id: CL:5574
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5574_Mixed,_incl._High-affinity_branched-chain_amino_acid_transport_ATP-binding_protein,_and_Branched-chain_amino_acid_ATP-binding_cassette_transporter

description:
  Mixed, incl. High-affinity branched-chain amino acid transport ATP-binding protein, and Branched-chain amino acid ATP-binding cassette transporter


id: CL:5584
description: Branched-chain amino acid transmembrane transporter activity, and Leucine binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5584_Branched-chain_amino_acid_transmembrane_transporter_activity,_and_Leucine_binding


id: CL:5593
description: Branched-chain amino acid ATP-binding cassette transporter, and Branched-chain amino acid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5593_Branched-chain_amino_acid_ATP-binding_cassette_transporter,_and_Branched-chain_amino_acid_transport


id: CL:5602
description: Branched-chain amino acid transmembrane transporter activity, and Amide binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5602_Branched-chain_amino_acid_transmembrane_transporter_activity,_and_Amide_binding


id: CL:5611
description: Leu/Ile/Val-binding protein, and Branched-chain amino acid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5611_Leu/Ile/Val-binding_protein,_and_Branched-chain_amino_acid_transport


id: CL:5620
description: Branched-chain amino acid transmembrane transporter activity, and Leu/Ile/Val-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5620_Branched-chain_amino_acid_transmembrane_transporter_activity,_and_Leu/Ile/Val-binding_protein


id: CL:5622
description: Branched-chain amino acid transmembrane transporter activity, and Leu/Ile/Val-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5622_Branched-chain_amino_acid_transmembrane_transporter_activity,_and_Leu/Ile/Val-binding_protein


id: CL:5638
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5638_Mixed,_incl._High-affinity_branched-chain_amino_acid_transport_ATP-binding_protein,_and_Branched-chain_amino_acid_ATP-binding_cassette_transporter

description:
  Mixed, incl. High-affinity branched-chain amino acid transport ATP-binding protein, and Branched-chain amino acid ATP-binding cassette transporter


id: CL:564
description: Small heat shock protein, and Clp, repeat (R) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:564_Small_heat_shock_protein,_and_Clp,_repeat_(R)_domain


id: CL:5651
description: Mixed, incl. Heavy-metal resistance protein, and AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5651_Mixed,_incl._Heavy-metal_resistance_protein,_and_AAA_domain


id: CL:5665
description: AMP-dependent ligase, C-terminal, and Phenylacetic acid degradation-related domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5665_AMP-dependent_ligase,_C-terminal,_and_Phenylacetic_acid_degradation-related_domain


id: CL:5668
description: Phenylacetic acid degradation-related domain, and AMP-dependent ligase, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5668_Phenylacetic_acid_degradation-related_domain,_and_AMP-dependent_ligase,_C-terminal


id: CL:5701
description: Mixed, incl. D-aminopeptidase, and Carboxypeptidase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5701_Mixed,_incl._D-aminopeptidase,_and_Carboxypeptidase


id: CL:5703
description: Mixed, incl. D-aminopeptidase, and Carboxypeptidase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5703_Mixed,_incl._D-aminopeptidase,_and_Carboxypeptidase


id: CL:5726
description: Mixed, incl. Bacterial microcompartment, and NqrDE/RnfAE
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5726_Mixed,_incl._Bacterial_microcompartment,_and_NqrDE/RnfAE


id: CL:5727
description: Mixed, incl. NqrDE/RnfAE, and FMN-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5727_Mixed,_incl._NqrDE/RnfAE,_and_FMN-binding


id: CL:5730
description: Mixed, incl. NqrDE/RnfAE, and FMN-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5730_Mixed,_incl._NqrDE/RnfAE,_and_FMN-binding


id: CL:5762
description: Bacterial microcompartment, and Type IV pilus inner membrane component PilM
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5762_Bacterial_microcompartment,_and_Type_IV_pilus_inner_membrane_component_PilM


id: CL:5777
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5777_Mostly_uncharacterized,_incl._Degradation_of_aromatic_compounds,_and_Pyrroloquinoline_quinone_biosynthetic_process

description:
  Mostly uncharacterized, incl. Degradation of aromatic compounds, and Pyrroloquinoline quinone biosynthetic process


id: CL:5778
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5778_Mostly_uncharacterized,_incl._Degradation_of_aromatic_compounds,_and_Pyrroloquinoline_quinone_biosynthetic_process

description:
  Mostly uncharacterized, incl. Degradation of aromatic compounds, and Pyrroloquinoline quinone biosynthetic process


id: CL:5779
description: Mixed, incl. CoA enzyme activase, and FldB/FldC dehydratase alpha/beta subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5779_Mixed,_incl._CoA_enzyme_activase,_and_FldB/FldC_dehydratase_alpha/beta_subunit


id: CL:5781
description: Mixed, incl. CoA enzyme activase, and FldB/FldC dehydratase alpha/beta subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5781_Mixed,_incl._CoA_enzyme_activase,_and_FldB/FldC_dehydratase_alpha/beta_subunit


id: CL:5783
description: FldB/FldC dehydratase alpha/beta subunit, and Anaerobic glutamate catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5783_FldB/FldC_dehydratase_alpha/beta_subunit,_and_Anaerobic_glutamate_catabolic_process


id: CL:579
description: Band 7 domain, and Peptidase M41
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:579_Band_7_domain,_and_Peptidase_M41


id: CL:5795
description: Mixed, incl. NAD synthase, and S-adenosyl-L-methionine binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5795_Mixed,_incl._NAD_synthase,_and_S-adenosyl-L-methionine_binding


id: CL:5807
description: Mixed, incl. Coenzyme PQQ synthesis protein E-like, and AsnC-type HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5807_Mixed,_incl._Coenzyme_PQQ_synthesis_protein_E-like,_and_AsnC-type_HTH_domain


id: CL:5808
description: Coenzyme PQQ synthesis protein E-like, and AsnC-type HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5808_Coenzyme_PQQ_synthesis_protein_E-like,_and_AsnC-type_HTH_domain


id: CL:5817
description: Mixed, incl. Putative regulatory protein, and Ferritin-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5817_Mixed,_incl._Putative_regulatory_protein,_and_Ferritin-like


id: CL:5826
description: Mostly uncharacterized, incl. Rubrerythrin, and Uncharacterised ArCR, COG2043
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5826_Mostly_uncharacterized,_incl._Rubrerythrin,_and_Uncharacterised_ArCR,_COG2043


id: CL:5829
description: Mixed, incl. Rubrerythrin, and Uncharacterised ArCR, COG2043
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5829_Mixed,_incl._Rubrerythrin,_and_Uncharacterised_ArCR,_COG2043


id: CL:5830
description: Mostly uncharacterized, incl. Glycosyl transferase family 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5830_Mostly_uncharacterized,_incl._Glycosyl_transferase_family_2


id: CL:5841
description: Mixed, incl. Rubrerythrin, and Uncharacterised ArCR, COG2043
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5841_Mixed,_incl._Rubrerythrin,_and_Uncharacterised_ArCR,_COG2043


id: CL:5861
description: Mixed, incl. Diol catabolic process, and Bifunctional nuclease domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5861_Mixed,_incl._Diol_catabolic_process,_and_Bifunctional_nuclease_domain


id: CL:5875
description: Mixed, incl. Transposition, and Transposase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5875_Mixed,_incl._Transposition,_and_Transposase


id: CL:5876
description: Mixed, incl. Transposition, and Transposase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5876_Mixed,_incl._Transposition,_and_Transposase


id: CL:5877
description: Mixed, incl. Transposition, and Transposase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5877_Mixed,_incl._Transposition,_and_Transposase


id: CL:5878
description: Mixed, incl. Transposition, and Transposase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5878_Mixed,_incl._Transposition,_and_Transposase


id: CL:5881
description: Mixed, incl. Transposase, and Ribonuclease H-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5881_Mixed,_incl._Transposase,_and_Ribonuclease_H-like_superfamily


id: CL:5883
description: Integrase, catalytic core, and Arc-type ribbon-helix-helix
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5883_Integrase,_catalytic_core,_and_Arc-type_ribbon-helix-helix


id: CL:5899
description: Mixed, incl. Transposase domain (DUF772), and DDE transposase sub-family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5899_Mixed,_incl._Transposase_domain_(DUF772),_and_DDE_transposase_sub-family


id: CL:5913
description: Mixed, incl. IstB-like ATP-binding protein, and Carotenoid biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5913_Mixed,_incl._IstB-like_ATP-binding_protein,_and_Carotenoid_biosynthesis


id: CL:5924
description: Mixed, incl. Transposase IS200-like superfamily, and Response to virus
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5924_Mixed,_incl._Transposase_IS200-like_superfamily,_and_Response_to_virus


id: CL:5926
description: Mixed, incl. Response to virus, and Transposase IS200-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5926_Mixed,_incl._Response_to_virus,_and_Transposase_IS200-like_superfamily


id: CL:5956
description: Mixed, incl. Protein of unknown function DUF6079, and Fido domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5956_Mixed,_incl._Protein_of_unknown_function_DUF6079,_and_Fido_domain


id: CL:5958
description: Protein of unknown function DUF6079, and Fido domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5958_Protein_of_unknown_function_DUF6079,_and_Fido_domain


id: CL:597
description: Mixed, incl. Tetratricopeptide repeats, and Peptidase S1C, Do
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:597_Mixed,_incl._Tetratricopeptide_repeats,_and_Peptidase_S1C,_Do


id: CL:599
description: Mixed, incl. Sulfotransferase domain, and Carbohydrate kinase, FGGY
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:599_Mixed,_incl._Sulfotransferase_domain,_and_Carbohydrate_kinase,_FGGY


id: CL:5994
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5994_Mostly_uncharacterized,_incl._Type-IV_secretion_system_protein_TraC/Conjugative_transfer_ATPase,_and_Peptidoglycan_muralytic_activity

description:
  Mostly uncharacterized, incl. Type-IV secretion system protein TraC/Conjugative transfer ATPase, and Peptidoglycan muralytic activity


id: CL:5995
description: Mixed, incl. Peptidoglycan muralytic activity, and Protein transmembrane transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5995_Mixed,_incl._Peptidoglycan_muralytic_activity,_and_Protein_transmembrane_transport


id: CL:5996
description: Mostly uncharacterized, incl. Peptidoglycan muralytic activity, and Peptidase S26
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5996_Mostly_uncharacterized,_incl._Peptidoglycan_muralytic_activity,_and_Peptidase_S26


id: CL:5998
description: Mostly uncharacterized, incl. Peptidase S26, and Toxin metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:5998_Mostly_uncharacterized,_incl._Peptidase_S26,_and_Toxin_metabolic_process


id: CL:6000
description: Mixed, incl. Peptidase S26, and Protein transport across the cell outer membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:6000_Mixed,_incl._Peptidase_S26,_and_Protein_transport_across_the_cell_outer_membrane


id: CL:602
description: Mixed, incl. Carbohydrate kinase, FGGY, and Ankyrin repeat-containing domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:602_Mixed,_incl._Carbohydrate_kinase,_FGGY,_and_Ankyrin_repeat-containing_domain_superfamily


id: CL:6031
description: Mixed, incl. HNH nuclease, and Sel1-like repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:6031_Mixed,_incl._HNH_nuclease,_and_Sel1-like_repeat


id: CL:6040
description: Mixed, incl. Type-IV secretion system protein TraC/Conjugative transfer ATPase, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:6040_Mixed,_incl._Type-IV_secretion_system_protein_TraC/Conjugative_transfer_ATPase,_and_Signal


id: CL:6059
description: Mixed, incl. Organic radical-activating enzymes, and AMMECR1 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:6059_Mixed,_incl._Organic_radical-activating_enzymes,_and_AMMECR1_domain


id: CL:6061
description: Mixed, incl. AMMECR1 domain, and AmmeMemoRadiSam system radical SAM enzyme
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:6061_Mixed,_incl._AMMECR1_domain,_and_AmmeMemoRadiSam_system_radical_SAM_enzyme


id: CL:6063
description: AMMECR1 domain, and AmmeMemoRadiSam system radical SAM enzyme
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:6063_AMMECR1_domain,_and_AmmeMemoRadiSam_system_radical_SAM_enzyme


id: CL:6077
description: Mixed, incl. HhH-GPD domain, and Ubiquinone biosynthesis complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:6077_Mixed,_incl._HhH-GPD_domain,_and_Ubiquinone_biosynthesis_complex


id: CL:6097
description: Mixed, incl. Carotenoid biosynthetic process, and Elp3/MiaA/NifB-like, radical SAM core domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:6097_Mixed,_incl._Carotenoid_biosynthetic_process,_and_Elp3/MiaA/NifB-like,_radical_SAM_core_domain


id: CL:6113
description: Mostly uncharacterized, incl. DNA integration, and AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:6113_Mostly_uncharacterized,_incl._DNA_integration,_and_AAA_domain


id: CL:6115
description: Mixed, incl. AAA domain, and Mu transposase, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:6115_Mixed,_incl._AAA_domain,_and_Mu_transposase,_C-terminal


id: CL:6117
description: Mixed, incl. AAA domain, and Mu transposase, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:6117_Mixed,_incl._AAA_domain,_and_Mu_transposase,_C-terminal


id: CL:6118
description: Mixed, incl. AAA domain, and Mu transposase, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:6118_Mixed,_incl._AAA_domain,_and_Mu_transposase,_C-terminal


id: CL:6134
description: Mixed, incl. AAA domain, and Mu transposase, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:6134_Mixed,_incl._AAA_domain,_and_Mu_transposase,_C-terminal


id: CL:6162
description: Mixed, incl. Sterol-sensing domain, and YsiA-like protein, C-terminal region
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:6162_Mixed,_incl._Sterol-sensing_domain,_and_YsiA-like_protein,_C-terminal_region


id: CL:6165
description: Sterol-sensing domain, and Translation elongation factor activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:6165_Sterol-sensing_domain,_and_Translation_elongation_factor_activity


id: CL:6186
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:6186_Mixed,_incl._TRAP_transporter_solute_receptor,_TAXI_family,_and_TRAP_C4-dicarboxylate_transport_system_permease,_fused_DctM-DctQ

description:
  Mixed, incl. TRAP transporter solute receptor, TAXI family, and TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ


id: CL:6187
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:6187_Mixed,_incl._TRAP_transporter_solute_receptor,_TAXI_family,_and_TRAP_C4-dicarboxylate_transport_system_permease,_fused_DctM-DctQ

description:
  Mixed, incl. TRAP transporter solute receptor, TAXI family, and TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ


id: CL:6189
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:6189_TRAP_transporter_solute_receptor,_TAXI_family,_and_TRAP_C4-dicarboxylate_transport_system_permease,_fused_DctM-DctQ

description:
  TRAP transporter solute receptor, TAXI family, and TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ


id: CL:621
description: Mixed, incl. HAT (Half-A-TPR) repeat, and Sulfotransferase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:621_Mixed,_incl._HAT_(Half-A-TPR)_repeat,_and_Sulfotransferase_family


id: CL:6215
description: Ankyrin repeat-containing domain superfamily, and DNA replication, synthesis of RNA primer
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:6215_Ankyrin_repeat-containing_domain_superfamily,_and_DNA_replication,_synthesis_of_RNA_primer


id: CL:6230
description: Mixed, incl. YjbQ-like superfamily, and Ferritin-like diiron domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:6230_Mixed,_incl._YjbQ-like_superfamily,_and_Ferritin-like_diiron_domain


id: CL:6244
description: Mixed, incl. ParB/Sulfiredoxin domain, and cyclic-di-GMP binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:6244_Mixed,_incl._ParB/Sulfiredoxin_domain,_and_cyclic-di-GMP_binding


id: CL:6265
description: Mixed, incl. Outer membrane-bounded periplasmic space, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:6265_Mixed,_incl._Outer_membrane-bounded_periplasmic_space,_and_Signal


id: CL:6390
description: Mixed, incl. ATP synthase subunit alpha, N-terminal domain-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:6390_Mixed,_incl._ATP_synthase_subunit_alpha,_N-terminal_domain-like_superfamily


id: CL:641
description: Mixed, incl. RNA polymerase sigma-70 region 1.2, and Cyclic nucleotide-binding domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:641_Mixed,_incl._RNA_polymerase_sigma-70_region_1.2,_and_Cyclic_nucleotide-binding_domain_superfamily


id: CL:643
description: Cyclic nucleotide-binding domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:643_Cyclic_nucleotide-binding_domain_superfamily


id: CL:666
description: Mixed, incl. Isoprenoid biosynthetic process, and ncRNA processing
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:666_Mixed,_incl._Isoprenoid_biosynthetic_process,_and_ncRNA_processing


id: CL:667
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:667_Mixed,_incl._Isoprenoid_biosynthetic_process,_and_Exonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_5-phosphomonoesters

description:
  Mixed, incl. Isoprenoid biosynthetic process, and Exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5-phosphomonoesters


id: CL:668
description: Isoprenoid biosynthetic process, and DNA catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:668_Isoprenoid_biosynthetic_process,_and_DNA_catabolic_process


id: CL:669
description: Mixed, incl. Isoprene biosynthesis, and Prenyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:669_Mixed,_incl._Isoprene_biosynthesis,_and_Prenyltransferase_activity


id: CL:670
description: Mixed, incl. Prenyltransferase activity, and POTRA domain, BamA/TamA-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:670_Mixed,_incl._Prenyltransferase_activity,_and_POTRA_domain,_BamA/TamA-like


id: CL:692
description: DNA catabolic process, and Polyprenyl synthetase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:692_DNA_catabolic_process,_and_Polyprenyl_synthetase


id: CL:704
description: Mixed, incl. DNA integration, and CMP kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:704_Mixed,_incl._DNA_integration,_and_CMP_kinase_activity


id: CL:719
description: Methylthiotransferase, and rRNA (adenine) methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:719_Methylthiotransferase,_and_rRNA_(adenine)_methyltransferase_activity


id: CL:733
description: Catalytic activity, acting on DNA, and Nucleotide excision repair
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:733_Catalytic_activity,_acting_on_DNA,_and_Nucleotide_excision_repair


id: CL:734
description: Catalytic activity, acting on DNA, and Nucleotide excision repair
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:734_Catalytic_activity,_acting_on_DNA,_and_Nucleotide_excision_repair


id: CL:737
description: Mismatch repair, and Nucleotide excision repair
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:737_Mismatch_repair,_and_Nucleotide_excision_repair


id: CL:739
description: Mismatch repair, and Nucleotide excision repair
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:739_Mismatch_repair,_and_Nucleotide_excision_repair


id: CL:740
description: Mismatch repair, and DNA/RNA polymerase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:740_Mismatch_repair,_and_DNA/RNA_polymerase_superfamily


id: CL:741
description: DNA damage sensor activity, and Nucleotide excision repair
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:741_DNA_damage_sensor_activity,_and_Nucleotide_excision_repair


id: CL:744
description: Mismatch repair, and 3-5 exonuclease
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:744_Mismatch_repair,_and_3-5_exonuclease


id: CL:768
description: DNA biosynthetic process, and 5-3 exonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:768_DNA_biosynthetic_process,_and_5-3_exonuclease_activity


id: CL:770
description: DNA polymerase complex, and Helix-hairpin-helix motif
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:770_DNA_polymerase_complex,_and_Helix-hairpin-helix_motif


id: CL:823
description: Endonuclease III, and Deoxyribonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:823_Endonuclease_III,_and_Deoxyribonuclease_activity


id: CL:839
description: DNA topoisomerase, type IIA-like domain superfamily, and Gas vesicle
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:839_DNA_topoisomerase,_type_IIA-like_domain_superfamily,_and_Gas_vesicle


id: CL:850
description: Bacterial nucleoid, and Nucleotide biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:850_Bacterial_nucleoid,_and_Nucleotide_biosynthesis


id: CL:872
description: Cellular amino acid biosynthetic process, and Nucleotide metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:872_Cellular_amino_acid_biosynthetic_process,_and_Nucleotide_metabolic_process


id: CL:873
description: Cellular amino acid biosynthetic process, and Nucleoside monophosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:873_Cellular_amino_acid_biosynthetic_process,_and_Nucleoside_monophosphate_biosynthetic_process


id: CL:874
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:874_Mixed,_incl._Nucleoside_monophosphate_biosynthetic_process,_and_Pteridine-containing_compound_metabolic_process

description:
  Mixed, incl. Nucleoside monophosphate biosynthetic process, and Pteridine-containing compound metabolic process


id: CL:875
description: Nucleoside monophosphate biosynthetic process, and Pyrimidine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:875_Nucleoside_monophosphate_biosynthetic_process,_and_Pyrimidine_metabolism


id: CL:876
description: Nucleoside monophosphate biosynthetic process, and Tetrahydrofolate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:876_Nucleoside_monophosphate_biosynthetic_process,_and_Tetrahydrofolate_metabolic_process


id: CL:877
description: Ribonucleoside monophosphate biosynthetic process, and One carbon pool by folate
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:877_Ribonucleoside_monophosphate_biosynthetic_process,_and_One_carbon_pool_by_folate


id: CL:878
description: Purine biosynthesis, and One carbon pool by folate
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:878_Purine_biosynthesis,_and_One_carbon_pool_by_folate


id: CL:879
description: Purine biosynthesis, and IMP cyclohydrolase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:879_Purine_biosynthesis,_and_IMP_cyclohydrolase_activity


id: CL:882
description: De novo IMP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:882_De_novo_IMP_biosynthetic_process


id: CL:907
description: Tetrahydrofolate interconversion, and NusB family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:907_Tetrahydrofolate_interconversion,_and_NusB_family


id: CL:922
description: De novo UMP biosynthetic process, and Permease family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:922_De_novo_UMP_biosynthetic_process,_and_Permease_family


id: CL:925
description: De novo UMP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:925_De_novo_UMP_biosynthetic_process


id: CL:945
description: PP-loop family, and Purine ribonucleoside metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:945_PP-loop_family,_and_Purine_ribonucleoside_metabolic_process


id: CL:957
description: Mixed, incl. Nucleotidase activity, and Cytochrome c554 and c-prime
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:957_Mixed,_incl._Nucleotidase_activity,_and_Cytochrome_c554_and_c-prime


id: CL:970
description: Mixed, incl. Riboflavin metabolic process, and Pteridine-containing compound biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:970_Mixed,_incl._Riboflavin_metabolic_process,_and_Pteridine-containing_compound_biosynthetic_process


id: CL:971
description: Riboflavin metabolic process, and Folic acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:971_Riboflavin_metabolic_process,_and_Folic_acid_metabolic_process


id: CL:996
description: Mixed, incl. MafB19-like deaminase, and dTMP metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121390_STRINGid_CL:996_Mixed,_incl._MafB19-like_deaminase,_and_dTMP_metabolic_process


id: GO:0000394
description: RNA splicing, via endonucleolytic cleavage and ligation
memo: https://amigo.geneontology.org/amigo/term/GO:0000394
golevel: 6
name:
  GOBP.STRING_v12.0_1121390_STRINGid_GO:0000394_RNA_splicing,_via_endonucleolytic_cleavage_and_ligation


id: GO:0000462
description: Maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
memo: https://amigo.geneontology.org/amigo/term/GO:0000462
golevel: 7
name:
  GOBP.STRING_v12.0_1121390_STRINGid_GO:0000462_Maturation_of_SSU-rRNA_from_tricistronic_rRNA_transcript_(SSU-rRNA,_5.8S_rRNA,_LSU-rRNA)


id: GO:0000701
description: Purine-specific mismatch base pair DNA N-glycosylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0000701
golevel: 6
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0000701_Purine-specific_mismatch_base_pair_DNA_N-glycosylase_activity


id: GO:0000716
description: Transcription-coupled nucleotide-excision repair, DNA damage recognition
memo: https://amigo.geneontology.org/amigo/term/GO:0000716
golevel: 7
name:
  GOBP.STRING_v12.0_1121390_STRINGid_GO:0000716_Transcription-coupled_nucleotide-excision_repair,_DNA_damage_recognition


id: GO:0000724
description: Double-strand break repair via homologous recombination
memo: https://amigo.geneontology.org/amigo/term/GO:0000724
golevel: 7
name:
  GOBP.STRING_v12.0_1121390_STRINGid_GO:0000724_Double-strand_break_repair_via_homologous_recombination


id: GO:0000820
description: Regulation of glutamine family amino acid metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0000820
name:
  GOBP.STRING_v12.0_1121390_STRINGid_GO:0000820_Regulation_of_glutamine_family_amino_acid_metabolic_process


id: GO:0001073
description: Transcription antitermination factor activity, DNA binding
memo: https://amigo.geneontology.org/amigo/term/GO:0001073
golevel: 2
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0001073_Transcription_antitermination_factor_activity,_DNA_binding


id: GO:0002926
description: tRNA wobble base 5-methoxycarbonylmethyl-2-thiouridinylation
memo: https://amigo.geneontology.org/amigo/term/GO:0002926
golevel: 9
name:
  GOBP.STRING_v12.0_1121390_STRINGid_GO:0002926_tRNA_wobble_base_5-methoxycarbonylmethyl-2-thiouridinylation


id: GO:0003848
description: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003848
golevel: 5
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0003848_2-amino-4-hydroxy-6-hydroxymethyldihydropteridine_diphosphokinase_activity


id: GO:0003864
description: 3-methyl-2-oxobutanoate hydroxymethyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003864
golevel: 5
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0003864_3-methyl-2-oxobutanoate_hydroxymethyltransferase_activity


id: GO:0003871
description: 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003871
golevel: 6
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0003871_5-methyltetrahydropteroyltriglutamate-homocysteine_S-methyltransferase_activity


id: GO:0003882
description: CDP-diacylglycerol-serine O-phosphatidyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003882
golevel: 6
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0003882_CDP-diacylglycerol-serine_O-phosphatidyltransferase_activity


id: GO:0003906
description: DNA-(apurinic or apyrimidinic site) endonuclease activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003906
golevel: 6
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0003906_DNA-(apurinic_or_apyrimidinic_site)_endonuclease_activity


id: GO:0003908
description: methylated-DNA-[protein]-cysteine S-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003908
golevel: 4
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0003908_methylated-DNA-[protein]-cysteine_S-methyltransferase_activity


id: GO:0003917
description: DNA topoisomerase type I (single strand cut, ATP-independent) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003917
golevel: 5
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0003917_DNA_topoisomerase_type_I_(single_strand_cut,_ATP-independent)_activity


id: GO:0003918
description: DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003918
golevel: 3
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0003918_DNA_topoisomerase_type_II_(double_strand_cut,_ATP-hydrolyzing)_activity


id: GO:0003949
memo: https://amigo.geneontology.org/amigo/term/GO:0003949
golevel: 5
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0003949_1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide_isomerase_activity

description:
  1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity


id: GO:0004015
description: adenosylmethionine-8-amino-7-oxononanoate transaminase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004015
golevel: 5
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0004015_adenosylmethionine-8-amino-7-oxononanoate_transaminase_activity


id: GO:0004018
description: N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004018
golevel: 5
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0004018_N6-(1,2-dicarboxyethyl)AMP_AMP-lyase_(fumarate-forming)_activity


id: GO:0004088
description: Carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004088
golevel: 5
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0004088_Carbamoyl-phosphate_synthase_(glutamine-hydrolyzing)_activity


id: GO:0004316
description: 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004316
golevel: 5
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0004316_3-oxoacyl-[acyl-carrier-protein]_reductase_(NADPH)_activity


id: GO:0004317
description: 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004317
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0004317_3-hydroxypalmitoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0004360
description: glutamine-fructose-6-phosphate transaminase (isomerizing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004360
golevel: 6
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0004360_glutamine-fructose-6-phosphate_transaminase_(isomerizing)_activity


id: GO:0004471
description: Malate dehydrogenase (decarboxylating) (NAD+) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004471
golevel: 5
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0004471_Malate_dehydrogenase_(decarboxylating)_(NAD+)_activity


id: GO:0004486
description: Methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004486
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0004486_Methylenetetrahydrofolate_dehydrogenase_[NAD(P)+]_activity


id: GO:0004488
description: Methylenetetrahydrofolate dehydrogenase (NADP+) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004488
golevel: 5
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0004488_Methylenetetrahydrofolate_dehydrogenase_(NADP+)_activity


id: GO:0004489
description: Methylenetetrahydrofolate reductase (NAD(P)H) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004489
golevel: 5
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0004489_Methylenetetrahydrofolate_reductase_(NAD(P)H)_activity


id: GO:0004514
description: Nicotinate-nucleotide diphosphorylase (carboxylating) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004514
golevel: 5
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0004514_Nicotinate-nucleotide_diphosphorylase_(carboxylating)_activity


id: GO:0004591
description: Oxoglutarate dehydrogenase (succinyl-transferring) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004591
golevel: 5
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0004591_Oxoglutarate_dehydrogenase_(succinyl-transferring)_activity


id: GO:0004639
description: Phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004639
golevel: 5
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0004639_Phosphoribosylaminoimidazolesuccinocarboxamide_synthase_activity


id: GO:0004641
description: Phosphoribosylformylglycinamidine cyclo-ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004641
golevel: 5
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0004641_Phosphoribosylformylglycinamidine_cyclo-ligase_activity


id: GO:0004643
description: Phosphoribosylaminoimidazolecarboxamide formyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004643
golevel: 5
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0004643_Phosphoribosylaminoimidazolecarboxamide_formyltransferase_activity


id: GO:0004648
description: O-phospho-L-serine:2-oxoglutarate aminotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004648
golevel: 5
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0004648_O-phospho-L-serine:2-oxoglutarate_aminotransferase_activity


id: GO:0004715
description: Non-membrane spanning protein tyrosine kinase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004715
golevel: 5
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0004715_Non-membrane_spanning_protein_tyrosine_kinase_activity


id: GO:0004719
description: protein-L-isoaspartate (D-aspartate) O-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004719
golevel: 5
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0004719_protein-L-isoaspartate_(D-aspartate)_O-methyltransferase_activity


id: GO:0004748
description: Ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0004748
golevel: 6
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0004748_Ribonucleoside-diphosphate_reductase_activity,_thioredoxin_disulfide_as_acceptor


id: GO:0005315
description: Inorganic phosphate transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0005315
golevel: 5
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0005315_Inorganic_phosphate_transmembrane_transporter_activity


id: GO:0005350
description: Pyrimidine nucleobase transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0005350
golevel: 4
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0005350_Pyrimidine_nucleobase_transmembrane_transporter_activity


id: GO:0006388
description: tRNA splicing, via endonucleolytic cleavage and ligation
memo: https://amigo.geneontology.org/amigo/term/GO:0006388
golevel: 6
name:
  GOBP.STRING_v12.0_1121390_STRINGid_GO:0006388_tRNA_splicing,_via_endonucleolytic_cleavage_and_ligation


id: GO:0006490
description: Oligosaccharide-lipid intermediate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0006490
name:
  GOBP.STRING_v12.0_1121390_STRINGid_GO:0006490_Oligosaccharide-lipid_intermediate_biosynthetic_process


id: GO:0006515
description: Protein quality control for misfolded or incompletely synthesized proteins
memo: https://amigo.geneontology.org/amigo/term/GO:0006515
golevel: 7
name:
  GOBP.STRING_v12.0_1121390_STRINGid_GO:0006515_Protein_quality_control_for_misfolded_or_incompletely_synthesized_proteins


id: GO:0006614
description: SRP-dependent cotranslational protein targeting to membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0006614
golevel: 6
name:
  GOBP.STRING_v12.0_1121390_STRINGid_GO:0006614_SRP-dependent_cotranslational_protein_targeting_to_membrane


id: GO:0007157
description: Heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules
memo: https://amigo.geneontology.org/amigo/term/GO:0007157
golevel: 4
name:
  GOBP.STRING_v12.0_1121390_STRINGid_GO:0007157_Heterophilic_cell-cell_adhesion_via_plasma_membrane_cell_adhesion_molecules


id: GO:0008028
description: Monocarboxylic acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008028
golevel: 4
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0008028_Monocarboxylic_acid_transmembrane_transporter_activity


id: GO:0008108
description: UDP-glucose:hexose-1-phosphate uridylyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008108
golevel: 6
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0008108_UDP-glucose:hexose-1-phosphate_uridylyltransferase_activity


id: GO:0008425
description: 2-polyprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008425
golevel: 6
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0008425_2-polyprenyl-6-methoxy-1,4-benzoquinone_methyltransferase_activity


id: GO:0008444
description: CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008444
golevel: 6
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0008444_CDP-diacylglycerol-glycerol-3-phosphate_3-phosphatidyltransferase_activity


id: GO:0008659
description: (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008659
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0008659_(3R)-hydroxymyristoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0008685
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008685
golevel: 4
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0008685_2-C-methyl-D-erythritol_2,4-cyclodiphosphate_synthase_activity


id: GO:0008686
description: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008686
golevel: 4
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0008686_3,4-dihydroxy-2-butanone-4-phosphate_synthase_activity


id: GO:0008690
description: 3-deoxy-manno-octulosonate cytidylyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008690
golevel: 6
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0008690_3-deoxy-manno-octulosonate_cytidylyltransferase_activity


id: GO:0008693
description: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008693
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0008693_3-hydroxydecanoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0008703
description: 5-amino-6-(5-phosphoribosylamino)uracil reductase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008703
golevel: 5
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0008703_5-amino-6-(5-phosphoribosylamino)uracil_reductase_activity


id: GO:0008757
description: S-adenosylmethionine-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008757
golevel: 5
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0008757_S-adenosylmethionine-dependent_methyltransferase_activity


id: GO:0008759
description: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008759
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0008759_UDP-3-O-[3-hydroxymyristoyl]_N-acetylglucosamine_deacetylase_activity


id: GO:0008760
description: UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008760
golevel: 4
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0008760_UDP-N-acetylglucosamine_1-carboxyvinyltransferase_activity


id: GO:0008764
description: UDP-N-acetylmuramoylalanine-D-glutamate ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008764
golevel: 5
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0008764_UDP-N-acetylmuramoylalanine-D-glutamate_ligase_activity


id: GO:0008765
description: UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008765
golevel: 5
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0008765_UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate_ligase_activity


id: GO:0008766
description: UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008766
golevel: 5
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0008766_UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine_ligase_activity


id: GO:0008780
description: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008780
golevel: 6
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0008780_acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine_O-acyltransferase_activity


id: GO:0008817
description: cob(I)yrinic acid a,c-diamide adenosyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008817
golevel: 4
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0008817_cob(I)yrinic_acid_a,c-diamide_adenosyltransferase_activity


id: GO:0008825
description: Cyclopropane-fatty-acyl-phospholipid synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008825
golevel: 6
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0008825_Cyclopropane-fatty-acyl-phospholipid_synthase_activity


id: GO:0008835
description: Diaminohydroxyphosphoribosylaminopyrimidine deaminase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008835
golevel: 5
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0008835_Diaminohydroxyphosphoribosylaminopyrimidine_deaminase_activity


id: GO:0008882
description: [Glutamate-ammonia-ligase] adenylyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008882
golevel: 6
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0008882_[Glutamate-ammonia-ligase]_adenylyltransferase_activity


id: GO:0008939
description: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008939
golevel: 5
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0008939_Nicotinate-nucleotide-dimethylbenzimidazole_phosphoribosyltransferase_activity


id: GO:0008961
description: Phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008961
golevel: 3
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0008961_Phosphatidylglycerol-prolipoprotein_diacylglyceryl_transferase_activity


id: GO:0008963
description: phospho-N-acetylmuramoyl-pentapeptide-transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008963
golevel: 5
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0008963_phospho-N-acetylmuramoyl-pentapeptide-transferase_activity


id: GO:0008965
description: Phosphoenolpyruvate-protein phosphotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008965
golevel: 5
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0008965_Phosphoenolpyruvate-protein_phosphotransferase_activity


id: GO:0008982
description: protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008982
golevel: 4
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0008982_protein-N(PI)-phosphohistidine-sugar_phosphotransferase_activity


id: GO:0009095
description: Aromatic amino acid family biosynthetic process, prephenate pathway
memo: https://amigo.geneontology.org/amigo/term/GO:0009095
golevel: 7
name:
  GOBP.STRING_v12.0_1121390_STRINGid_GO:0009095_Aromatic_amino_acid_family_biosynthetic_process,_prephenate_pathway


id: GO:0009130
description: Pyrimidine nucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009130
golevel: 7
name:
  GOBP.STRING_v12.0_1121390_STRINGid_GO:0009130_Pyrimidine_nucleoside_monophosphate_biosynthetic_process


id: GO:0009139
description: Pyrimidine nucleoside diphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009139
golevel: 7
name:
  GOBP.STRING_v12.0_1121390_STRINGid_GO:0009139_Pyrimidine_nucleoside_diphosphate_biosynthetic_process


id: GO:0009148
description: Pyrimidine nucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009148
golevel: 7
name:
  GOBP.STRING_v12.0_1121390_STRINGid_GO:0009148_Pyrimidine_nucleoside_triphosphate_biosynthetic_process


id: GO:0009157
description: Deoxyribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009157
golevel: 7
name:
  GOBP.STRING_v12.0_1121390_STRINGid_GO:0009157_Deoxyribonucleoside_monophosphate_biosynthetic_process


id: GO:0009168
description: Purine ribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009168
golevel: 8
name:
  GOBP.STRING_v12.0_1121390_STRINGid_GO:0009168_Purine_ribonucleoside_monophosphate_biosynthetic_process


id: GO:0009173
description: Pyrimidine ribonucleoside monophosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009173
golevel: 8
name:
  GOBP.STRING_v12.0_1121390_STRINGid_GO:0009173_Pyrimidine_ribonucleoside_monophosphate_metabolic_process


id: GO:0009174
description: Pyrimidine ribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009174
golevel: 8
name:
  GOBP.STRING_v12.0_1121390_STRINGid_GO:0009174_Pyrimidine_ribonucleoside_monophosphate_biosynthetic_process


id: GO:0009175
description: Pyrimidine ribonucleoside monophosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009175
golevel: 8
name:
  GOBP.STRING_v12.0_1121390_STRINGid_GO:0009175_Pyrimidine_ribonucleoside_monophosphate_catabolic_process


id: GO:0009176
description: Pyrimidine deoxyribonucleoside monophosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009176
golevel: 8
name:
  GOBP.STRING_v12.0_1121390_STRINGid_GO:0009176_Pyrimidine_deoxyribonucleoside_monophosphate_metabolic_process


id: GO:0009177
description: Pyrimidine deoxyribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009177
golevel: 8
name:
  GOBP.STRING_v12.0_1121390_STRINGid_GO:0009177_Pyrimidine_deoxyribonucleoside_monophosphate_biosynthetic_process


id: GO:0009196
description: Pyrimidine deoxyribonucleoside diphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009196
golevel: 8
name:
  GOBP.STRING_v12.0_1121390_STRINGid_GO:0009196_Pyrimidine_deoxyribonucleoside_diphosphate_metabolic_process


id: GO:0009197
description: Pyrimidine deoxyribonucleoside diphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009197
golevel: 8
name:
  GOBP.STRING_v12.0_1121390_STRINGid_GO:0009197_Pyrimidine_deoxyribonucleoside_diphosphate_biosynthetic_process


id: GO:0009206
description: Purine ribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009206
golevel: 8
name:
  GOBP.STRING_v12.0_1121390_STRINGid_GO:0009206_Purine_ribonucleoside_triphosphate_biosynthetic_process


id: GO:0009208
description: Pyrimidine ribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009208
golevel: 8
name:
  GOBP.STRING_v12.0_1121390_STRINGid_GO:0009208_Pyrimidine_ribonucleoside_triphosphate_metabolic_process


id: GO:0009209
description: Pyrimidine ribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009209
golevel: 8
name:
  GOBP.STRING_v12.0_1121390_STRINGid_GO:0009209_Pyrimidine_ribonucleoside_triphosphate_biosynthetic_process


id: GO:0009210
description: Pyrimidine ribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009210
golevel: 8
name:
  GOBP.STRING_v12.0_1121390_STRINGid_GO:0009210_Pyrimidine_ribonucleoside_triphosphate_catabolic_process


id: GO:0009211
description: Pyrimidine deoxyribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009211
golevel: 8
name:
  GOBP.STRING_v12.0_1121390_STRINGid_GO:0009211_Pyrimidine_deoxyribonucleoside_triphosphate_metabolic_process


id: GO:0009212
description: Pyrimidine deoxyribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009212
golevel: 8
name:
  GOBP.STRING_v12.0_1121390_STRINGid_GO:0009212_Pyrimidine_deoxyribonucleoside_triphosphate_biosynthetic_process


id: GO:0009213
description: Pyrimidine deoxyribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009213
golevel: 8
name:
  GOBP.STRING_v12.0_1121390_STRINGid_GO:0009213_Pyrimidine_deoxyribonucleoside_triphosphate_catabolic_process


id: GO:0009215
description: Purine deoxyribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009215
golevel: 8
name:
  GOBP.STRING_v12.0_1121390_STRINGid_GO:0009215_Purine_deoxyribonucleoside_triphosphate_metabolic_process


id: GO:0009217
description: Purine deoxyribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009217
golevel: 8
name:
  GOBP.STRING_v12.0_1121390_STRINGid_GO:0009217_Purine_deoxyribonucleoside_triphosphate_catabolic_process


id: GO:0009401
description: Phosphoenolpyruvate-dependent sugar phosphotransferase system
memo: https://amigo.geneontology.org/amigo/term/GO:0009401
golevel: 5
name:
  GOBP.STRING_v12.0_1121390_STRINGid_GO:0009401_Phosphoenolpyruvate-dependent_sugar_phosphotransferase_system


id: GO:0009427
description: Bacterial-type flagellum basal body, distal rod, L ring
memo: https://amigo.geneontology.org/amigo/term/GO:0009427
golevel: 2
name:
  GOCC.STRING_v12.0_1121390_STRINGid_GO:0009427_Bacterial-type_flagellum_basal_body,_distal_rod,_L_ring


id: GO:0009428
description: Bacterial-type flagellum basal body, distal rod, P ring
memo: https://amigo.geneontology.org/amigo/term/GO:0009428
golevel: 2
name:
  GOCC.STRING_v12.0_1121390_STRINGid_GO:0009428_Bacterial-type_flagellum_basal_body,_distal_rod,_P_ring


id: GO:0009678
description: Pyrophosphate hydrolysis-driven proton transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0009678
golevel: 5
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0009678_Pyrophosphate_hydrolysis-driven_proton_transmembrane_transporter_activity


id: GO:0010557
description: Positive regulation of macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010557
golevel: 7
name:
  GOBP.STRING_v12.0_1121390_STRINGid_GO:0010557_Positive_regulation_of_macromolecule_biosynthetic_process


id: GO:0010558
description: Negative regulation of macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010558
golevel: 7
name:
  GOBP.STRING_v12.0_1121390_STRINGid_GO:0010558_Negative_regulation_of_macromolecule_biosynthetic_process


id: GO:0010604
description: Positive regulation of macromolecule metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010604
golevel: 6
name:
  GOBP.STRING_v12.0_1121390_STRINGid_GO:0010604_Positive_regulation_of_macromolecule_metabolic_process


id: GO:0010605
description: Negative regulation of macromolecule metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010605
golevel: 6
name:
  GOBP.STRING_v12.0_1121390_STRINGid_GO:0010605_Negative_regulation_of_macromolecule_metabolic_process


id: GO:0015169
description: glycerol-3-phosphate transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015169
golevel: 4
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0015169_glycerol-3-phosphate_transmembrane_transporter_activity


id: GO:0015318
description: Inorganic molecular entity transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015318
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0015318_Inorganic_molecular_entity_transmembrane_transporter_activity


id: GO:0015415
description: ATPase-coupled phosphate ion transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015415
golevel: 3
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0015415_ATPase-coupled_phosphate_ion_transmembrane_transporter_activity


id: GO:0015451
description: Decarboxylation-driven active transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015451
golevel: 5
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0015451_Decarboxylation-driven_active_transmembrane_transporter_activity


id: GO:0015453
description: Oxidoreduction-driven active transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015453
golevel: 5
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0015453_Oxidoreduction-driven_active_transmembrane_transporter_activity


id: GO:0015605
description: Organophosphate ester transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015605
golevel: 3
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0015605_Organophosphate_ester_transmembrane_transporter_activity


id: GO:0015651
description: Quaternary ammonium group transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015651
golevel: 3
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0015651_Quaternary_ammonium_group_transmembrane_transporter_activity


id: GO:0015658
description: Branched-chain amino acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015658
golevel: 4
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0015658_Branched-chain_amino_acid_transmembrane_transporter_activity


id: GO:0015932
description: Nucleobase-containing compound transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015932
golevel: 3
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0015932_Nucleobase-containing_compound_transmembrane_transporter_activity


id: GO:0015975
description: Energy derivation by oxidation of reduced inorganic compounds
memo: https://amigo.geneontology.org/amigo/term/GO:0015975
golevel: 4
name:
  GOBP.STRING_v12.0_1121390_STRINGid_GO:0015975_Energy_derivation_by_oxidation_of_reduced_inorganic_compounds


id: GO:0016614
description: Oxidoreductase activity, acting on CH-OH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016614
golevel: 3
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0016614_Oxidoreductase_activity,_acting_on_CH-OH_group_of_donors


id: GO:0016616
description: Oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016616
golevel: 4
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0016616_Oxidoreductase_activity,_acting_on_the_CH-OH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016620
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016620
golevel: 4
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0016620_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016622
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors, cytochrome as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016622
golevel: 4
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0016622_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_cytochrome_as_acceptor


id: GO:0016624
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016624
golevel: 4
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0016624_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_disulfide_as_acceptor


id: GO:0016625
memo: https://amigo.geneontology.org/amigo/term/GO:0016625
golevel: 4
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0016625_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_iron-sulfur_protein_as_acceptor

description:
  Oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor


id: GO:0016627
description: Oxidoreductase activity, acting on the CH-CH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016627
golevel: 3
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0016627_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors


id: GO:0016628
description: Oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016628
golevel: 4
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0016628_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016634
description: Oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016634
golevel: 4
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0016634_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_oxygen_as_acceptor


id: GO:0016635
memo: https://amigo.geneontology.org/amigo/term/GO:0016635
golevel: 4
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0016635_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_quinone_or_related_compound_as_acceptor

description:
  Oxidoreductase activity, acting on the CH-CH group of donors, quinone or related compound as acceptor


id: GO:0016638
description: Oxidoreductase activity, acting on the CH-NH2 group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016638
golevel: 3
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0016638_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors


id: GO:0016639
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016639
golevel: 4
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0016639_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016641
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016641
golevel: 4
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0016641_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_oxygen_as_acceptor


id: GO:0016642
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016642
golevel: 4
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0016642_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_disulfide_as_acceptor


id: GO:0016645
description: Oxidoreductase activity, acting on the CH-NH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016645
golevel: 3
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0016645_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors


id: GO:0016646
description: Oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016646
golevel: 4
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0016646_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016647
description: Oxidoreductase activity, acting on the CH-NH group of donors, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016647
golevel: 4
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0016647_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors,_oxygen_as_acceptor


id: GO:0016655
description: Oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016655
golevel: 4
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0016655_Oxidoreductase_activity,_acting_on_NAD(P)H,_quinone_or_similar_compound_as_acceptor


id: GO:0016657
description: Oxidoreductase activity, acting on NAD(P)H, nitrogenous group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016657
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0016657_Oxidoreductase_activity,_acting_on_NAD(P)H,_nitrogenous_group_as_acceptor


id: GO:0016661
description: Oxidoreductase activity, acting on other nitrogenous compounds as donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016661
golevel: 3
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0016661_Oxidoreductase_activity,_acting_on_other_nitrogenous_compounds_as_donors


id: GO:0016662
description: Oxidoreductase activity, acting on other nitrogenous compounds as donors, cytochrome as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016662
golevel: 4
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0016662_Oxidoreductase_activity,_acting_on_other_nitrogenous_compounds_as_donors,_cytochrome_as_acceptor


id: GO:0016663
description: Oxidoreductase activity, acting on other nitrogenous compounds as donors, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016663
golevel: 4
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0016663_Oxidoreductase_activity,_acting_on_other_nitrogenous_compounds_as_donors,_oxygen_as_acceptor


id: GO:0016667
description: Oxidoreductase activity, acting on a sulfur group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016667
golevel: 3
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0016667_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors


id: GO:0016668
description: Oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016668
golevel: 4
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0016668_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_NAD(P)_as_acceptor


id: GO:0016671
description: Oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016671
golevel: 4
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0016671_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_disulfide_as_acceptor


id: GO:0016673
description: Oxidoreductase activity, acting on a sulfur group of donors, iron-sulfur protein as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016673
golevel: 4
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0016673_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_iron-sulfur_protein_as_acceptor


id: GO:0016684
description: Oxidoreductase activity, acting on peroxide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016684
golevel: 3
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0016684_Oxidoreductase_activity,_acting_on_peroxide_as_acceptor


id: GO:0016699
description: Oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016699
golevel: 4
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0016699_Oxidoreductase_activity,_acting_on_hydrogen_as_donor,_iron-sulfur_protein_as_acceptor


id: GO:0016701
description: Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen
memo: https://amigo.geneontology.org/amigo/term/GO:0016701
golevel: 3
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0016701_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen


id: GO:0016702
memo: https://amigo.geneontology.org/amigo/term/GO:0016702
golevel: 4
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0016702_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen,_incorporation_of_two_atoms_of_oxygen

description:
  Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen


id: GO:0016703
memo: https://amigo.geneontology.org/amigo/term/GO:0016703
golevel: 4
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0016703_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen,_incorporation_of_one_atom_of_oxygen_(internal_monooxygenases_or_internal_mixed_function_oxidases)

description:
  Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)


id: GO:0016705
memo: https://amigo.geneontology.org/amigo/term/GO:0016705
golevel: 3
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0016705_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen


id: GO:0016709
memo: https://amigo.geneontology.org/amigo/term/GO:0016709
golevel: 4
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0016709_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen,_NAD(P)H_as_one_donor,_and_incorporation_of_one_atom_of_oxygen

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen


id: GO:0016712
memo: https://amigo.geneontology.org/amigo/term/GO:0016712
golevel: 4
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0016712_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen,_reduced_flavin_or_flavoprotein_as_one_donor,_and_incorporation_of_one_atom_of_oxygen

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen


id: GO:0016721
description: Oxidoreductase activity, acting on superoxide radicals as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016721
golevel: 3
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0016721_Oxidoreductase_activity,_acting_on_superoxide_radicals_as_acceptor


id: GO:0016726
description: Oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016726
golevel: 4
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0016726_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_NAD_or_NADP_as_acceptor


id: GO:0016728
description: Oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016728
golevel: 4
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0016728_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_disulfide_as_acceptor


id: GO:0016730
description: Oxidoreductase activity, acting on iron-sulfur proteins as donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016730
golevel: 3
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0016730_Oxidoreductase_activity,_acting_on_iron-sulfur_proteins_as_donors


id: GO:0016731
description: Oxidoreductase activity, acting on iron-sulfur proteins as donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016731
golevel: 4
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0016731_Oxidoreductase_activity,_acting_on_iron-sulfur_proteins_as_donors,_NAD_or_NADP_as_acceptor


id: GO:0016742
description: Hydroxymethyl-, formyl- and related transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0016742
golevel: 4
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0016742_Hydroxymethyl-,_formyl-_and_related_transferase_activity


id: GO:0016747
description: Acyltransferase activity, transferring groups other than amino-acyl groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016747
golevel: 4
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0016747_Acyltransferase_activity,_transferring_groups_other_than_amino-acyl_groups


id: GO:0016765
description: Transferase activity, transferring alkyl or aryl (other than methyl) groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016765
golevel: 3
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0016765_Transferase_activity,_transferring_alkyl_or_aryl_(other_than_methyl)_groups


id: GO:0016772
description: Transferase activity, transferring phosphorus-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016772
golevel: 3
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0016772_Transferase_activity,_transferring_phosphorus-containing_groups


id: GO:0016773
description: Phosphotransferase activity, alcohol group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016773
golevel: 4
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0016773_Phosphotransferase_activity,_alcohol_group_as_acceptor


id: GO:0016774
description: Phosphotransferase activity, carboxyl group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016774
golevel: 4
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0016774_Phosphotransferase_activity,_carboxyl_group_as_acceptor


id: GO:0016775
description: Phosphotransferase activity, nitrogenous group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016775
golevel: 4
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0016775_Phosphotransferase_activity,_nitrogenous_group_as_acceptor


id: GO:0016776
description: Phosphotransferase activity, phosphate group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016776
golevel: 4
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0016776_Phosphotransferase_activity,_phosphate_group_as_acceptor


id: GO:0016780
description: Phosphotransferase activity, for other substituted phosphate groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016780
golevel: 4
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0016780_Phosphotransferase_activity,_for_other_substituted_phosphate_groups


id: GO:0016782
description: Transferase activity, transferring sulphur-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016782
golevel: 3
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0016782_Transferase_activity,_transferring_sulphur-containing_groups


id: GO:0016796
memo: https://amigo.geneontology.org/amigo/term/GO:0016796
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0016796_Exonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_5-phosphomonoesters

description:
  Exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5-phosphomonoesters


id: GO:0016810
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
memo: https://amigo.geneontology.org/amigo/term/GO:0016810
golevel: 3
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0016810_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds


id: GO:0016811
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
memo: https://amigo.geneontology.org/amigo/term/GO:0016811
golevel: 4
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0016811_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_linear_amides


id: GO:0016812
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
memo: https://amigo.geneontology.org/amigo/term/GO:0016812
golevel: 4
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0016812_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_cyclic_amides


id: GO:0016813
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines
memo: https://amigo.geneontology.org/amigo/term/GO:0016813
golevel: 4
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0016813_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_linear_amidines


id: GO:0016814
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines
memo: https://amigo.geneontology.org/amigo/term/GO:0016814
golevel: 4
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0016814_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_cyclic_amidines


id: GO:0016818
description: Hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
memo: https://amigo.geneontology.org/amigo/term/GO:0016818
golevel: 4
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0016818_Hydrolase_activity,_acting_on_acid_anhydrides,_in_phosphorus-containing_anhydrides


id: GO:0016822
description: Hydrolase activity, acting on acid carbon-carbon bonds
memo: https://amigo.geneontology.org/amigo/term/GO:0016822
golevel: 3
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0016822_Hydrolase_activity,_acting_on_acid_carbon-carbon_bonds


id: GO:0016823
description: Hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances
memo: https://amigo.geneontology.org/amigo/term/GO:0016823
golevel: 4
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0016823_Hydrolase_activity,_acting_on_acid_carbon-carbon_bonds,_in_ketonic_substances


id: GO:0016825
description: Hydrolase activity, acting on acid phosphorus-nitrogen bonds
memo: https://amigo.geneontology.org/amigo/term/GO:0016825
golevel: 3
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0016825_Hydrolase_activity,_acting_on_acid_phosphorus-nitrogen_bonds


id: GO:0016837
description: Carbon-oxygen lyase activity, acting on polysaccharides
memo: https://amigo.geneontology.org/amigo/term/GO:0016837
golevel: 4
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0016837_Carbon-oxygen_lyase_activity,_acting_on_polysaccharides


id: GO:0016855
description: Racemase and epimerase activity, acting on amino acids and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0016855
golevel: 4
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0016855_Racemase_and_epimerase_activity,_acting_on_amino_acids_and_derivatives


id: GO:0016856
description: Racemase and epimerase activity, acting on hydroxy acids and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0016856
golevel: 4
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0016856_Racemase_and_epimerase_activity,_acting_on_hydroxy_acids_and_derivatives


id: GO:0016857
description: Racemase and epimerase activity, acting on carbohydrates and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0016857
golevel: 4
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0016857_Racemase_and_epimerase_activity,_acting_on_carbohydrates_and_derivatives


id: GO:0016861
description: Intramolecular oxidoreductase activity, interconverting aldoses and ketoses
memo: https://amigo.geneontology.org/amigo/term/GO:0016861
golevel: 4
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0016861_Intramolecular_oxidoreductase_activity,_interconverting_aldoses_and_ketoses


id: GO:0016867
description: Intramolecular transferase activity, transferring acyl groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016867
golevel: 4
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0016867_Intramolecular_transferase_activity,_transferring_acyl_groups


id: GO:0016868
description: Intramolecular transferase activity, phosphotransferases
memo: https://amigo.geneontology.org/amigo/term/GO:0016868
golevel: 4
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0016868_Intramolecular_transferase_activity,_phosphotransferases


id: GO:0016869
description: Intramolecular transferase activity, transferring amino groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016869
golevel: 4
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0016869_Intramolecular_transferase_activity,_transferring_amino_groups


id: GO:0016884
description: Carbon-nitrogen ligase activity, with glutamine as amido-N-donor
memo: https://amigo.geneontology.org/amigo/term/GO:0016884
golevel: 4
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0016884_Carbon-nitrogen_ligase_activity,_with_glutamine_as_amido-N-donor


id: GO:0016888
description: Endodeoxyribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016888
golevel: 4
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0016888_Endodeoxyribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016889
description: Endodeoxyribonuclease activity, producing 3-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016889
golevel: 4
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0016889_Endodeoxyribonuclease_activity,_producing_3-phosphomonoesters


id: GO:0016891
description: Endoribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016891
golevel: 4
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0016891_Endoribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016893
memo: https://amigo.geneontology.org/amigo/term/GO:0016893
name:
  GOMF.STRING_v12.0_1121390_STRINGid_GO:0016893_Endonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_5-phosphomonoesters

description:
  Endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5-phosphomonoesters


