# geneInfo

ensembl_gene_id: SAMN02745215_00017
symbol: SHN49008.1
gene_biotype: protein_coding
description:
  Na+/H+-dicarboxylate symporter; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: SAMN02745215_00024
symbol: glmS
gene_biotype: protein_coding
description:
  Glutamine--fructose-6-phosphate transaminase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.


ensembl_gene_id: SAMN02745215_00026
symbol: glmM
gene_biotype: protein_coding
description:
  Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.


ensembl_gene_id: SAMN02745215_00029
symbol: dacA
gene_biotype: protein_coding
description:
  Diadenylate cyclase; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria.


ensembl_gene_id: SAMN02745215_00053
symbol: SHN49309.1
gene_biotype: protein_coding
description:
  DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: SAMN02745215_00064
symbol: nadE
gene_biotype: protein_coding
description:
  NH(3)-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source; Belongs to the NAD synthetase family.


ensembl_gene_id: SAMN02745215_00065
symbol: SHN49430.1
gene_biotype: protein_coding
description:
  Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family.


ensembl_gene_id: SAMN02745215_00068
symbol: SHN49458.1
gene_biotype: protein_coding
description:
  Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.


ensembl_gene_id: SAMN02745215_00075
symbol: SHN49521.1
gene_biotype: protein_coding
description:
  trimethylamine-N-oxide reductase (cytochrome c); Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: SAMN02745215_00092
symbol: argD
gene_biotype: protein_coding
description:
  Acetylornithine aminotransferase apoenzyme; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.


ensembl_gene_id: SAMN02745215_00093
symbol: argB
gene_biotype: protein_coding
description:
  N-acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.


ensembl_gene_id: SAMN02745215_00094
symbol: argJ
gene_biotype: protein_coding
description:
  N-acetylglutamate synthase /glutamate N-acetyltransferase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family.


ensembl_gene_id: SAMN02745215_00095
symbol: argC
gene_biotype: protein_coding
description:
  N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.


ensembl_gene_id: SAMN02745215_00101
symbol: SHN49758.1
gene_biotype: protein_coding
description:
  23S rRNA (adenine-N6)-dimethyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.


ensembl_gene_id: SAMN02745215_00110
symbol: sbcD
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease I subunit D; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family.


ensembl_gene_id: SAMN02745215_00119
symbol: rplY
gene_biotype: protein_coding
description:
  LSU ribosomal protein L25P; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.


ensembl_gene_id: SAMN02745215_00135
symbol: SHN50069.1
gene_biotype: protein_coding
description:
  Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: SAMN02745215_00141
symbol: rplM
gene_biotype: protein_coding
description:
  LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.


ensembl_gene_id: SAMN02745215_00145
symbol: SHN50153.1
gene_biotype: protein_coding
description:
  Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. Belongs to the chaperonin (HSP60) family.


ensembl_gene_id: SAMN02745215_00273
symbol: SHN51280.1
gene_biotype: protein_coding
description:
  Anaerobic selenocysteine-containing dehydrogenase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: SAMN02745215_00275
symbol: nifH
gene_biotype: protein_coding
description:
  Nitrogenase iron protein NifH; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family.


ensembl_gene_id: SAMN02745215_00294
symbol: SHN51503.1
gene_biotype: protein_coding
description:
  ATP-dependent DNA ligase LigD phosphoesterase module /ATP-dependent DNA ligase LigD polymerase module.


ensembl_gene_id: SAMN02745215_00304
symbol: folD
gene_biotype: protein_coding
description:
  Methenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.


ensembl_gene_id: SAMN02745215_00313
symbol: SHN51705.1
gene_biotype: protein_coding
description:
  Tat (twin-arginine translocation) pathway signal sequence; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: SAMN02745215_00335
symbol: clpP
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease proteolytic subunit ClpP; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: SAMN02745215_00366
symbol: SHN52146.1
gene_biotype: protein_coding
description:
  L-alanine-DL-glutamate epimerase; Belongs to the mandelate racemase/muconate lactonizing enzyme family.


ensembl_gene_id: SAMN02745215_00369
symbol: SHN52165.1
gene_biotype: protein_coding
description:
  GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex.


ensembl_gene_id: SAMN02745215_00379
symbol: SHN52243.1
gene_biotype: protein_coding
description:
  Tetrathionate reductase subunit A; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: SAMN02745215_00388
symbol: SHN52320.1
gene_biotype: protein_coding
description:
  Peroxiredoxin (alkyl hydroperoxide reductase subunit C); Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.


ensembl_gene_id: SAMN02745215_00390
symbol: menC
gene_biotype: protein_coding
description:
  O-succinylbenzoate synthase; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB).


ensembl_gene_id: SAMN02745215_00391
symbol: menE
gene_biotype: protein_coding
description:
  O-succinylbenzoic acid--CoA ligase; Converts 2-succinylbenzoate (OSB) to 2-succinylbenzoyl-CoA (OSB-CoA); Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily.


ensembl_gene_id: SAMN02745215_00392
symbol: menB
gene_biotype: protein_coding
description:
  1,4-Dihydroxy-2-naphthoyl-CoA synthase; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA).


ensembl_gene_id: SAMN02745215_00393
symbol: menH
gene_biotype: protein_coding
description:
  2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase; Catalyzes a proton abstraction reaction that results in 2,5- elimination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC) and the formation of 2-succinyl-6- hydroxy-2,4-cyclohexadiene-1-carboxylate (SHCHC).


ensembl_gene_id: SAMN02745215_00394
symbol: menD
gene_biotype: protein_coding
description:
  2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Belongs to the TPP enzyme family. MenD subfamily.


ensembl_gene_id: SAMN02745215_00397
symbol: truA
gene_biotype: protein_coding
description:
  tRNA pseudouridine38-40 synthase; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.


ensembl_gene_id: SAMN02745215_00398
symbol: acsA
gene_biotype: protein_coding
description:
  Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family.


ensembl_gene_id: SAMN02745215_00415
symbol: rpoA
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: SAMN02745215_00416
symbol: rpsD
gene_biotype: protein_coding
description:
  SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.


ensembl_gene_id: SAMN02745215_00417
symbol: rpsK
gene_biotype: protein_coding
description:
  SSU ribosomal protein S11P; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.


ensembl_gene_id: SAMN02745215_00418
symbol: rpsM
gene_biotype: protein_coding
description:
  SSU ribosomal protein S13P; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.


ensembl_gene_id: SAMN02745215_00420
symbol: infA
gene_biotype: protein_coding
description:
  Bacterial translation initiation factor 1 (bIF-1); One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.


ensembl_gene_id: SAMN02745215_00421
symbol: map
gene_biotype: protein_coding
description:
  Methionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.


ensembl_gene_id: SAMN02745215_00422
symbol: adk
gene_biotype: protein_coding
description:
  Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.


ensembl_gene_id: SAMN02745215_00423
symbol: secY
gene_biotype: protein_coding
description:
  Protein translocase subunit secY/sec61 alpha; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.


ensembl_gene_id: SAMN02745215_00424
symbol: rplO
gene_biotype: protein_coding
description:
  LSU ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.


ensembl_gene_id: SAMN02745215_00426
symbol: rpsE
gene_biotype: protein_coding
description:
  SSU ribosomal protein S5P; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.


ensembl_gene_id: SAMN02745215_00427
symbol: rplR
gene_biotype: protein_coding
description:
  LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.


ensembl_gene_id: SAMN02745215_00428
symbol: rplF
gene_biotype: protein_coding
description:
  LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.


ensembl_gene_id: SAMN02745215_00429
symbol: rpsH
gene_biotype: protein_coding
description:
  SSU ribosomal protein S8P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.


ensembl_gene_id: SAMN02745215_00430
symbol: rpsZ
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.


ensembl_gene_id: SAMN02745215_00431
symbol: rplE
gene_biotype: protein_coding
description:
  LSU ribosomal protein L5P; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.


ensembl_gene_id: SAMN02745215_00432
symbol: rplX
gene_biotype: protein_coding
description:
  LSU ribosomal protein L24P; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.


ensembl_gene_id: SAMN02745215_00433
symbol: rplN
gene_biotype: protein_coding
description:
  LSU ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.


ensembl_gene_id: SAMN02745215_00434
symbol: rpsQ
gene_biotype: protein_coding
description:
  SSU ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.


ensembl_gene_id: SAMN02745215_00436
symbol: rplP
gene_biotype: protein_coding
description:
  LSU ribosomal protein L16P; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.


ensembl_gene_id: SAMN02745215_00437
symbol: rpsC
gene_biotype: protein_coding
description:
  SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.


ensembl_gene_id: SAMN02745215_00438
symbol: rplV
gene_biotype: protein_coding
description:
  LSU ribosomal protein L22P; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.


ensembl_gene_id: SAMN02745215_00439
symbol: rpsS
gene_biotype: protein_coding
description:
  SSU ribosomal protein S19P; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.


ensembl_gene_id: SAMN02745215_00440
symbol: rplB
gene_biotype: protein_coding
description:
  LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.


ensembl_gene_id: SAMN02745215_00441
symbol: rplW
gene_biotype: protein_coding
description:
  LSU ribosomal protein L23P; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.


ensembl_gene_id: SAMN02745215_00443
symbol: rplC
gene_biotype: protein_coding
description:
  LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.


ensembl_gene_id: SAMN02745215_00444
symbol: rpsJ
gene_biotype: protein_coding
description:
  SSU ribosomal protein S10P; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.


ensembl_gene_id: SAMN02745215_00445
symbol: tuf
gene_biotype: protein_coding
description:
  Translation elongation factor 1A (EF-1A/EF-Tu); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.


ensembl_gene_id: SAMN02745215_00446
symbol: fusA
gene_biotype: protein_coding
description:
  Translation elongation factor 2 (EF-2/EF-G); Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. [...]


ensembl_gene_id: SAMN02745215_00447
symbol: rpsG
gene_biotype: protein_coding
description:
  SSU ribosomal protein S7P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.


ensembl_gene_id: SAMN02745215_00448
symbol: rpsL
gene_biotype: protein_coding
description:
  SSU ribosomal protein S12P; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.


ensembl_gene_id: SAMN02745215_00450
symbol: rpoC
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: SAMN02745215_00456
symbol: rplL
gene_biotype: protein_coding
description:
  LSU ribosomal protein L12P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.


ensembl_gene_id: SAMN02745215_00457
symbol: rplJ
gene_biotype: protein_coding
description:
  LSU ribosomal protein L10P; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.


ensembl_gene_id: SAMN02745215_00459
symbol: rplA
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.


ensembl_gene_id: SAMN02745215_00460
symbol: rplK
gene_biotype: protein_coding
description:
  LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.


ensembl_gene_id: SAMN02745215_00461
symbol: nusG
gene_biotype: protein_coding
description:
  Transcription antitermination protein nusG; Participates in transcription elongation, termination and antitermination.


ensembl_gene_id: SAMN02745215_00462
symbol: secE
gene_biotype: protein_coding
description:
  Protein translocase subunit secE/sec61 gamma; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.


ensembl_gene_id: SAMN02745215_00467
symbol: SHN52940.1
gene_biotype: protein_coding
description:
  23S rRNA (guanosine2251-2'-O)-methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: SAMN02745215_00468
symbol: thyX
gene_biotype: protein_coding
description:
  Thymidylate synthase (FAD); Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant.


ensembl_gene_id: SAMN02745215_00469
symbol: mrnC
gene_biotype: protein_coding
description:
  Ribonuclease-3 family protein; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family.


ensembl_gene_id: SAMN02745215_00473
symbol: gltX
gene_biotype: protein_coding
description:
  glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu).


ensembl_gene_id: SAMN02745215_00474
symbol: ispF
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP).


ensembl_gene_id: SAMN02745215_00475
symbol: ispD
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP).


ensembl_gene_id: SAMN02745215_00479
symbol: radA
gene_biotype: protein_coding
description:
  DNA repair protein RadA/Sms; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.


ensembl_gene_id: SAMN02745215_00490
symbol: panB
gene_biotype: protein_coding
description:
  Ketopantoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family.


ensembl_gene_id: SAMN02745215_00499
symbol: dinB
gene_biotype: protein_coding
description:
  DNA polymerase-4; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.


ensembl_gene_id: SAMN02745215_00508
symbol: SHN53234.1
gene_biotype: protein_coding
description:
  Indolepyruvate ferredoxin oxidoreductase alpha subunit; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates.


ensembl_gene_id: SAMN02745215_00520
symbol: SHN53299.1
gene_biotype: protein_coding
description:
  Anaerobic ribonucleoside-triphosphate reductase activating protein; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine.


ensembl_gene_id: SAMN02745215_00569
symbol: SHN53655.1
gene_biotype: protein_coding
description:
  Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.


ensembl_gene_id: SAMN02745215_00571
symbol: SHN53670.1
gene_biotype: protein_coding
description:
  Anaerobic dimethyl sulfoxide reductase subunit A; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: SAMN02745215_00594
symbol: SHN53867.1
gene_biotype: protein_coding
description:
  Nitrate reductase alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: SAMN02745215_00598
symbol: SHN53904.1
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase.


ensembl_gene_id: SAMN02745215_00609
symbol: SHN55786.1
gene_biotype: protein_coding
description:
  Putative ABC transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: SAMN02745215_00612
symbol: addB
gene_biotype: protein_coding
description:
  DNA helicase/exodeoxyribonuclease V, subunit B; ATP-dependent DNA helicase; Belongs to the helicase family. AddB/RexB type 1 subfamily.


ensembl_gene_id: SAMN02745215_00618
symbol: SHN55878.1
gene_biotype: protein_coding
description:
  Cardiolipin synthetase 2; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol.


ensembl_gene_id: SAMN02745215_00627
symbol: SHN55967.1
gene_biotype: protein_coding
description:
  Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family.


ensembl_gene_id: SAMN02745215_00685
symbol: ppk
gene_biotype: protein_coding
description:
  Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.


ensembl_gene_id: SAMN02745215_00693
symbol: SHN56533.1
gene_biotype: protein_coding
description:
  methylated-DNA-[protein]-cysteine S-methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated.


ensembl_gene_id: SAMN02745215_00700
symbol: katG
gene_biotype: protein_coding
description:
  Catalase-peroxidase; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily.


ensembl_gene_id: SAMN02745215_00721
symbol: sucD
gene_biotype: protein_coding
description:
  succinyl-CoA synthetase (ADP-forming) alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.


ensembl_gene_id: SAMN02745215_00733
symbol: SHN56849.1
gene_biotype: protein_coding
description:
  D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: SAMN02745215_00745
symbol: mdh
gene_biotype: protein_coding
description:
  Malate dehydrogenase (NAD); Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.


ensembl_gene_id: SAMN02745215_00812
symbol: SHN57600.1
gene_biotype: protein_coding
description:
  Chromosome partitioning ATPase, Mrp family, contains Fe-S cluster; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.


ensembl_gene_id: SAMN02745215_00830
symbol: SHN57736.1
gene_biotype: protein_coding
description:
  ATPase, P-type (transporting), HAD superfamily, subfamily IC/heavy metal translocating P-type ATPase.


ensembl_gene_id: SAMN02745215_00839
symbol: SHN57799.1
gene_biotype: protein_coding
description:
  Amino acid/amide ABC transporter membrane protein 2, HAAT family (TC 3.A.1.4.-); Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: SAMN02745215_00840
symbol: SHN57807.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: SAMN02745215_00857
symbol: moaA
gene_biotype: protein_coding
description:
  Cyclic pyranopterin monophosphate synthase subunit MoaA; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.


ensembl_gene_id: SAMN02745215_00861
symbol: rpiA
gene_biotype: protein_coding
description:
  Ribose-5-phosphate isomerase; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.


ensembl_gene_id: SAMN02745215_00872
symbol: SHN57986.1
gene_biotype: protein_coding
description:
  Alkylhydroperoxidase/carboxymuconolactone decarboxylase family protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.


ensembl_gene_id: SAMN02745215_00879
symbol: mtaD
gene_biotype: protein_coding
description:
  5-methylthioadenosine/S-adenosylhomocysteine deaminase; Catalyzes the deamination of 5-methylthioadenosine and S- adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine. Belongs to the metallo-dependent hydrolases superfamily. MTA/SAH deaminase family.


ensembl_gene_id: SAMN02745215_00902
symbol: tig
gene_biotype: protein_coding
description:
  Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.


ensembl_gene_id: SAMN02745215_01008
symbol: amj
gene_biotype: protein_coding
description:
  Protein of unknown function; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.


ensembl_gene_id: SAMN02745215_01021
symbol: SHN59161.1
gene_biotype: protein_coding
description:
  Alginate O-acetyltransferase complex protein AlgI; Belongs to the membrane-bound acyltransferase family.


ensembl_gene_id: SAMN02745215_01071
symbol: ade
gene_biotype: protein_coding
description:
  Adenine deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family.


ensembl_gene_id: SAMN02745215_01096
symbol: SHN59776.1
gene_biotype: protein_coding
description:
  Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.


ensembl_gene_id: SAMN02745215_01103
symbol: ddl
gene_biotype: protein_coding
description:
  D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.


ensembl_gene_id: SAMN02745215_01106
symbol: murF
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.


ensembl_gene_id: SAMN02745215_01107
symbol: SHN59880.1
gene_biotype: protein_coding
description:
  D-Ala-D-Ala dipeptidase vanX. Metallo peptidase. MEROPS family M15D; Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide.


ensembl_gene_id: SAMN02745215_01121
symbol: SHN60009.1
gene_biotype: protein_coding
description:
  D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family.


ensembl_gene_id: SAMN02745215_01146
symbol: SHN60225.1
gene_biotype: protein_coding
description:
  Prokaryotic molybdopterin-containing oxidoreductase family, molybdopterin binding subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: SAMN02745215_01213
symbol: ilvA
gene_biotype: protein_coding
description:
  L-threonine ammonia-lyase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA.


ensembl_gene_id: SAMN02745215_01223
symbol: polC
gene_biotype: protein_coding
description:
  DNA polymerase III catalytic subunit, PolC type; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: SAMN02745215_01225
symbol: leuA
gene_biotype: protein_coding
description:
  2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 2 subfamily.


ensembl_gene_id: SAMN02745215_01247
symbol: fdhD
gene_biotype: protein_coding
description:
  FdhD protein; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.


ensembl_gene_id: SAMN02745215_01257
symbol: SHN63026.1
gene_biotype: protein_coding
description:
  Amino acid ABC transporter substrate-binding protein, PAAT family; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: SAMN02745215_01263
symbol: nifH-2
gene_biotype: protein_coding
description:
  Mo-nitrogenase iron protein subunit NifH; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family.


ensembl_gene_id: SAMN02745215_01265
symbol: SHN63078.1
gene_biotype: protein_coding
description:
  Mo-nitrogenase MoFe protein subunit NifK; This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation; Belongs to the NifD/NifK/NifE/NifN family.


ensembl_gene_id: SAMN02745215_01285
symbol: speE
gene_biotype: protein_coding
description:
  Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.


ensembl_gene_id: SAMN02745215_01305
symbol: pdxS
gene_biotype: protein_coding
description:
  Pyridoxal phosphate synthase yaaD subunit; Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5- phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively. Belongs to the PdxS/SNZ family.


ensembl_gene_id: SAMN02745215_01306
symbol: pdxT
gene_biotype: protein_coding
description:
  Pyridoxal phosphate synthase yaaE subunit; Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS.


ensembl_gene_id: SAMN02745215_01308
symbol: SHN63471.1
gene_biotype: protein_coding
description:
  Putative SOS response-associated peptidase YedK; Belongs to the SOS response-associated peptidase family.


ensembl_gene_id: SAMN02745215_01321
symbol: SHN63614.1
gene_biotype: protein_coding
description:
  RNA polymerase, sigma-24 subunit, RpoE /RNA polymerase, sigma subunit, SigV; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: SAMN02745215_01357
symbol: SHN63914.1
gene_biotype: protein_coding
description:
  Methyltransferase, TIGR00027 family; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity.


ensembl_gene_id: SAMN02745215_01360
symbol: pckA
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate carboxykinase (ATP); Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA.


ensembl_gene_id: SAMN02745215_01381
symbol: SHN64161.1
gene_biotype: protein_coding
description:
  Sodium/proline symporter; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.


ensembl_gene_id: SAMN02745215_01400
symbol: allB
gene_biotype: protein_coding
description:
  Allantoinase; Catalyzes the conversion of allantoin (5-ureidohydantoin) to allantoic acid by hydrolytic cleavage of the five-member hydantoin ring; Belongs to the metallo-dependent hydrolases superfamily. Allantoinase family.


ensembl_gene_id: SAMN02745215_01403
symbol: SHN64390.1
gene_biotype: protein_coding
description:
  Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family.


ensembl_gene_id: SAMN02745215_01414
symbol: speD
gene_biotype: protein_coding
description:
  S-adenosylmethionine decarboxylase; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the prokaryotic AdoMetDC family. Type 2 subfamily.


ensembl_gene_id: SAMN02745215_01415
symbol: SHN64468.1
gene_biotype: protein_coding
description:
  Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.


ensembl_gene_id: SAMN02745215_01421
symbol: SHN64517.1
gene_biotype: protein_coding
description:
  Phosphate ABC transporter membrane protein 1, PhoT family; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: SAMN02745215_01423
symbol: pstB
gene_biotype: protein_coding
description:
  Phosphate ABC transporter ATP-binding protein, PhoT family; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.


ensembl_gene_id: SAMN02745215_01463
symbol: napA
gene_biotype: protein_coding
description:
  Periplasmic nitrate reductase subunit NapA apoprotein; Catalytic subunit of the nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite.


ensembl_gene_id: SAMN02745215_01466
symbol: SHN64943.1
gene_biotype: protein_coding
description:
  Cardiolipin synthase; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol; Belongs to the phospholipase D family. Cardiolipin synthase subfamily.


ensembl_gene_id: SAMN02745215_01468
symbol: ftsH
gene_biotype: protein_coding
description:
  Membrane protease FtsH catalytic subunit; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family.  In the central section; belongs to the AAA ATPase family.


ensembl_gene_id: SAMN02745215_01470
symbol: cbiD
gene_biotype: protein_coding
description:
  Cobalt-precorrin 5B C1-methyltransferase; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A.


ensembl_gene_id: SAMN02745215_01480
symbol: cobQ
gene_biotype: protein_coding
description:
  Adenosylcobyric acid synthase (glutamine-hydrolysing); Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.


ensembl_gene_id: SAMN02745215_01481
symbol: cobD
gene_biotype: protein_coding
description:
  Adenosylcobinamide-phosphate synthase; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.


ensembl_gene_id: SAMN02745215_01482
symbol: cbiA
gene_biotype: protein_coding
description:
  Hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing) /cobyrinate a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.


ensembl_gene_id: SAMN02745215_01516
symbol: acpS
gene_biotype: protein_coding
description:
  Holo-[acyl-carrier protein] synthase; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family.


ensembl_gene_id: SAMN02745215_01517
symbol: nnrD
gene_biotype: protein_coding
description:
  NAD(P)H-hydrate epimerase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration.  Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of bot [...]


ensembl_gene_id: SAMN02745215_01518
symbol: SHN65441.1
gene_biotype: protein_coding
description:
  Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.


ensembl_gene_id: SAMN02745215_01524
symbol: SHN65484.1
gene_biotype: protein_coding
description:
  Transcriptional modulator of MazE/toxin, MazF; Toxic component of a type II toxin-antitoxin (TA) system.


ensembl_gene_id: SAMN02745215_01568
symbol: SHN65751.1
gene_biotype: protein_coding
description:
  [SSU ribosomal protein S18P]-alanine acetyltransferase; Acetylates the N-terminal alanine of ribosomal protein S18.


ensembl_gene_id: SAMN02745215_01569
symbol: tsaD
gene_biotype: protein_coding
description:
  O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.


ensembl_gene_id: SAMN02745215_01582
symbol: SHN65850.1
gene_biotype: protein_coding
description:
  Formate dehydrogenase alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: SAMN02745215_01583
symbol: mobA
gene_biotype: protein_coding
description:
  Molybdenum cofactor guanylyltransferase; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor.


ensembl_gene_id: SAMN02745215_01586
symbol: moaC
gene_biotype: protein_coding
description:
  Cyclic pyranopterin monophosphate synthase subunit MoaC; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family.


ensembl_gene_id: SAMN02745215_01590
symbol: groS
gene_biotype: protein_coding
description:
  Chaperonin GroES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.


ensembl_gene_id: SAMN02745215_01591
symbol: groL
gene_biotype: protein_coding
description:
  Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.


ensembl_gene_id: SAMN02745215_01623
symbol: SHN66143.1
gene_biotype: protein_coding
description:
  Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.


ensembl_gene_id: SAMN02745215_01634
symbol: recD2
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease V alpha subunit; DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity; Belongs to the RecD family. RecD-like subfamily.


ensembl_gene_id: SAMN02745215_01680
symbol: glpK
gene_biotype: protein_coding
description:
  Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.


ensembl_gene_id: SAMN02745215_01714
symbol: SHN67862.1
gene_biotype: protein_coding
description:
  Putative molybdopterin biosynthesis protein; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.


ensembl_gene_id: SAMN02745215_01719
symbol: smpB
gene_biotype: protein_coding
description:
  SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...]


ensembl_gene_id: SAMN02745215_01720
symbol: hppA
gene_biotype: protein_coding
description:
  K(+)-stimulated pyrophosphate-energized sodium pump; Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na(+) movement across the membrane. Belongs to the H(+)-translocating pyrophosphatase (TC 3.A.10) family. K(+)-stimulated subfamily.


ensembl_gene_id: SAMN02745215_01721
symbol: SHN67935.1
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.


ensembl_gene_id: SAMN02745215_01722
symbol: eno
gene_biotype: protein_coding
description:
  Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.


ensembl_gene_id: SAMN02745215_01723
symbol: gpmI
gene_biotype: protein_coding
description:
  Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.


ensembl_gene_id: SAMN02745215_01724
symbol: tpiA
gene_biotype: protein_coding
description:
  Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.


ensembl_gene_id: SAMN02745215_01728
symbol: SHN67998.1
gene_biotype: protein_coding
description:
  Conserved hypothetical protein, cofD-related; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family.


ensembl_gene_id: SAMN02745215_01739
symbol: uvrA
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.


ensembl_gene_id: SAMN02745215_01740
symbol: uvrB
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate  [...]


ensembl_gene_id: SAMN02745215_01743
symbol: SHN68143.1
gene_biotype: protein_coding
description:
  C-terminal processing peptidase-3. Serine peptidase. MEROPS family S41A; Belongs to the peptidase S41A family.


ensembl_gene_id: SAMN02745215_01745
symbol: SHN68160.1
gene_biotype: protein_coding
description:
  Cell division protein FtsX; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.


ensembl_gene_id: SAMN02745215_01746
symbol: ftsE
gene_biotype: protein_coding
description:
  Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.


ensembl_gene_id: SAMN02745215_01750
symbol: prfB
gene_biotype: protein_coding
description:
  Bacterial peptide chain release factor 2 (bRF-2); Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.


ensembl_gene_id: SAMN02745215_01751
symbol: secA
gene_biotype: protein_coding
description:
  Protein translocase subunit secA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family.


ensembl_gene_id: SAMN02745215_01752
symbol: hpf
gene_biotype: protein_coding
description:
  Sigma 54 modulation protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.


ensembl_gene_id: SAMN02745215_01762
symbol: fabZ
gene_biotype: protein_coding
description:
  3-hydroxyacyl-[acyl-carrier-protein] dehydratase; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.


ensembl_gene_id: SAMN02745215_01765
symbol: sigI
gene_biotype: protein_coding
description:
  RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; Belongs to the sigma-70 factor family. SigI subfamily.


ensembl_gene_id: SAMN02745215_01766
symbol: SHN68352.1
gene_biotype: protein_coding
description:
  N-acetylmannosaminyltransferase; Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid.


ensembl_gene_id: SAMN02745215_01784
symbol: SHN68467.1
gene_biotype: protein_coding
description:
  Tetrathionate reductase alpha subunit precursor; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: SAMN02745215_01786
symbol: topB
gene_biotype: protein_coding
description:
  DNA topoisomerase-3; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]


ensembl_gene_id: SAMN02745215_01788
symbol: murA
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.


ensembl_gene_id: SAMN02745215_01790
symbol: atpC
gene_biotype: protein_coding
description:
  ATP synthase F1 subcomplex epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.


ensembl_gene_id: SAMN02745215_01791
symbol: atpD
gene_biotype: protein_coding
description:
  ATP synthase F1 subcomplex beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.


ensembl_gene_id: SAMN02745215_01792
symbol: atpG
gene_biotype: protein_coding
description:
  ATP synthase F1 subcomplex gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.


ensembl_gene_id: SAMN02745215_01793
symbol: atpA
gene_biotype: protein_coding
description:
  ATP synthase F1 subcomplex alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.


ensembl_gene_id: SAMN02745215_01794
symbol: atpH
gene_biotype: protein_coding
description:
  ATP synthase F1 subcomplex delta subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: SAMN02745215_01795
symbol: atpF
gene_biotype: protein_coding
description:
  ATP synthase F0 subcomplex B subunit; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.


ensembl_gene_id: SAMN02745215_01796
symbol: atpE
gene_biotype: protein_coding
description:
  ATP synthase F0 subcomplex C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: SAMN02745215_01797
symbol: atpB
gene_biotype: protein_coding
description:
  ATP synthase F0 subcomplex A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.


ensembl_gene_id: SAMN02745215_01826
symbol: upp
gene_biotype: protein_coding
description:
  Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.


ensembl_gene_id: SAMN02745215_01827
symbol: glyA
gene_biotype: protein_coding
description:
  Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.


ensembl_gene_id: SAMN02745215_01830
symbol: SHN68701.1
gene_biotype: protein_coding
description:
  Protein tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.


ensembl_gene_id: SAMN02745215_01831
symbol: mntP
gene_biotype: protein_coding
description:
  Putative Mn2+ efflux pump MntP; Probably functions as a manganese efflux pump. Belongs to the MntP (TC 9.B.29) family.


ensembl_gene_id: SAMN02745215_01832
symbol: SHN68713.1
gene_biotype: protein_coding
description:
  Translation factor SUA5; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.


ensembl_gene_id: SAMN02745215_01833
symbol: prmC
gene_biotype: protein_coding
description:
  [protein release factor]-glutamine N5-methyltransferase; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.


ensembl_gene_id: SAMN02745215_01834
symbol: prfA
gene_biotype: protein_coding
description:
  Bacterial peptide chain release factor 1 (bRF-1); Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.


ensembl_gene_id: SAMN02745215_01839
symbol: tal
gene_biotype: protein_coding
description:
  Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.


ensembl_gene_id: SAMN02745215_01845
symbol: pyrG
gene_biotype: protein_coding
description:
  CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.


ensembl_gene_id: SAMN02745215_01874
symbol: SHN68951.1
gene_biotype: protein_coding
description:
  methylmalonyl-CoA mutase C-terminal domain-containing protein/methyltransferase cognate corrinoid proteins.


ensembl_gene_id: SAMN02745215_01876
symbol: lysA
gene_biotype: protein_coding
description:
  Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.


ensembl_gene_id: SAMN02745215_01880
symbol: SHN68996.1
gene_biotype: protein_coding
description:
  Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily.


ensembl_gene_id: SAMN02745215_01894
symbol: SHN69091.1
gene_biotype: protein_coding
description:
  Propanediol utilization protein; Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate.


ensembl_gene_id: SAMN02745215_01906
symbol: cutD
gene_biotype: protein_coding
description:
  Pyruvate formate lyase activating enzyme; Catalyzes activation of the choline trimethylamine-lyase CutC under anaerobic conditions by generation of an organic free radical on a glycine residue, via an homolytic cleavage of S-adenosyl-L-methionine (SAM).


ensembl_gene_id: SAMN02745215_01907
symbol: cutC
gene_biotype: protein_coding
description:
  Formate C-acetyltransferase; Glycine radical enzyme that catalyzes the cleavage of a C-N bond in choline, producing trimethylamine (TMA) and acetaldehyde. Belongs to the glycyl radical enzyme (GRE) family. CutC subfamily.


ensembl_gene_id: SAMN02745215_01919
symbol: rlmH
gene_biotype: protein_coding
description:
  23S rRNA (pseudouridine1915-N3)-methyltransferase; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.


ensembl_gene_id: SAMN02745215_01933
symbol: SHN69395.1
gene_biotype: protein_coding
description:
  Amino acid/amide ABC transporter membrane protein 2, HAAT family; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: SAMN02745215_01934
symbol: SHN69403.1
gene_biotype: protein_coding
description:
  Amino acid/amide ABC transporter membrane protein 1, HAAT family; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: SAMN02745215_01938
symbol: purA
gene_biotype: protein_coding
description:
  Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.


ensembl_gene_id: SAMN02745215_01940
symbol: SHN69439.1
gene_biotype: protein_coding
description:
  Primary replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.


ensembl_gene_id: SAMN02745215_01945
symbol: rpsR
gene_biotype: protein_coding
description:
  SSU ribosomal protein S18P; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.


ensembl_gene_id: SAMN02745215_01946
symbol: SHN69495.1
gene_biotype: protein_coding
description:
  Single-strand binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.


ensembl_gene_id: SAMN02745215_01948
symbol: ychF
gene_biotype: protein_coding
description:
  Hypothetical protein; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.


ensembl_gene_id: SAMN02745215_01954
symbol: hypA
gene_biotype: protein_coding
description:
  Hydrogenase-3 nickel incorporation protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.


ensembl_gene_id: SAMN02745215_01962
symbol: rsmG
gene_biotype: protein_coding
description:
  16S rRNA m(7)G-527 methyltransferase; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.


ensembl_gene_id: SAMN02745215_01963
symbol: mnmG
gene_biotype: protein_coding
description:
  tRNA uridine 5-carboxymethylaminomethyl modification enzyme; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.


ensembl_gene_id: SAMN02745215_01964
symbol: mnmE
gene_biotype: protein_coding
description:
  tRNA modification GTPase trmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.


ensembl_gene_id: SAMN02745215_01967
symbol: SHN69663.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.


ensembl_gene_id: SAMN02745215_01968
symbol: rnpA
gene_biotype: protein_coding
description:
  Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.


ensembl_gene_id: SAMN02745215_01969
symbol: dnaA
gene_biotype: protein_coding
description:
  Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.


ensembl_gene_id: SAMN02745215_01970
symbol: SHN69683.1
gene_biotype: protein_coding
description:
  DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]


ensembl_gene_id: SAMN02745215_01971
symbol: recF
gene_biotype: protein_coding
description:
  DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family.


ensembl_gene_id: SAMN02745215_01973
symbol: gyrB
gene_biotype: protein_coding
description:
  DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: SAMN02745215_01974
symbol: gyrA
gene_biotype: protein_coding
description:
  DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: SAMN02745215_01976
symbol: serS
gene_biotype: protein_coding
description:
  seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).


ensembl_gene_id: SAMN02745215_01979
symbol: tadA
gene_biotype: protein_coding
description:
  tRNA-adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: SAMN02745215_02007
symbol: SHN69911.1
gene_biotype: protein_coding
description:
  Manganese/zinc/iron transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family.


ensembl_gene_id: SAMN02745215_02020
symbol: SHN70014.1
gene_biotype: protein_coding
description:
  Zinc transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family.


ensembl_gene_id: SAMN02745215_02031
symbol: dnaX
gene_biotype: protein_coding
description:
  DNA polymerase-3 subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: SAMN02745215_02032
symbol: SHN70096.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.


ensembl_gene_id: SAMN02745215_02033
symbol: recR
gene_biotype: protein_coding
description:
  DNA replication and repair protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.


ensembl_gene_id: SAMN02745215_02044
symbol: rsmI
gene_biotype: protein_coding
description:
  16S rRNA (cytidine1402-2'-O)-methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.


ensembl_gene_id: SAMN02745215_02046
symbol: metG
gene_biotype: protein_coding
description:
  methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.


ensembl_gene_id: SAMN02745215_02052
symbol: rnmV
gene_biotype: protein_coding
description:
  RNAse M5; Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step.


ensembl_gene_id: SAMN02745215_02053
symbol: rsmA
gene_biotype: protein_coding
description:
  Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.


ensembl_gene_id: SAMN02745215_02064
symbol: ispE
gene_biotype: protein_coding
description:
  4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.


ensembl_gene_id: SAMN02745215_02068
symbol: glmU
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine pyrophosphorylase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain.


ensembl_gene_id: SAMN02745215_02069
symbol: prs
gene_biotype: protein_coding
description:
  Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.


ensembl_gene_id: SAMN02745215_02071
symbol: SHN70403.1
gene_biotype: protein_coding
description:
  Copper-(or silver)-translocating P-type ATPase/heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase,TIGR01512.


ensembl_gene_id: SAMN02745215_02098
symbol: SHN70536.1
gene_biotype: protein_coding
description:
  N-terminal TM domain of oligopeptide transport permease C; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: SAMN02745215_02110
symbol: pth
gene_biotype: protein_coding
description:
  peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.


ensembl_gene_id: SAMN02745215_02118
symbol: mfd
gene_biotype: protein_coding
description:
  Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.


ensembl_gene_id: SAMN02745215_02122
symbol: SHN70615.1
gene_biotype: protein_coding
description:
  Bacterial nucleoid protein Hbs; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.


ensembl_gene_id: SAMN02745215_02130
symbol: tilS
gene_biotype: protein_coding
description:
  tRNA(Ile)-lysidine synthase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.


ensembl_gene_id: SAMN02745215_02132
symbol: ndk
gene_biotype: protein_coding
description:
  Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.


ensembl_gene_id: SAMN02745215_02138
symbol: SHN70678.1
gene_biotype: protein_coding
description:
  Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.


ensembl_gene_id: SAMN02745215_02142
symbol: panC
gene_biotype: protein_coding
description:
  Pantothenate synthetase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.


ensembl_gene_id: SAMN02745215_02143
symbol: panD
gene_biotype: protein_coding
description:
  L-aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.


ensembl_gene_id: SAMN02745215_02146
symbol: birA
gene_biotype: protein_coding
description:
  Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.


ensembl_gene_id: SAMN02745215_02147
symbol: coaX
gene_biotype: protein_coding
description:
  Pantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.


ensembl_gene_id: SAMN02745215_02148
symbol: SHN70724.1
gene_biotype: protein_coding
description:
  tRNA-U20-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.


ensembl_gene_id: SAMN02745215_02149
symbol: greA
gene_biotype: protein_coding
description:
  Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.


ensembl_gene_id: SAMN02745215_02165
symbol: rnj
gene_biotype: protein_coding
description:
  Ribonuclease J; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay.


ensembl_gene_id: SAMN02745215_02166
symbol: dapA
gene_biotype: protein_coding
description:
  Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).


ensembl_gene_id: SAMN02745215_02168
symbol: asd
gene_biotype: protein_coding
description:
  Aspartate semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.


ensembl_gene_id: SAMN02745215_02171
symbol: dapB
gene_biotype: protein_coding
description:
  Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.


ensembl_gene_id: SAMN02745215_02174
symbol: dut
gene_biotype: protein_coding
description:
  Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family.


ensembl_gene_id: SAMN02745215_02178
symbol: pnp
gene_biotype: protein_coding
description:
  Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.


ensembl_gene_id: SAMN02745215_02179
symbol: rpsO
gene_biotype: protein_coding
description:
  SSU ribosomal protein S15P; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.


ensembl_gene_id: SAMN02745215_02181
symbol: truB
gene_biotype: protein_coding
description:
  tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.


ensembl_gene_id: SAMN02745215_02183
symbol: rbfA
gene_biotype: protein_coding
description:
  Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.


ensembl_gene_id: SAMN02745215_02184
symbol: SHN71741.1
gene_biotype: protein_coding
description:
  Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex.


ensembl_gene_id: SAMN02745215_02189
symbol: rimP
gene_biotype: protein_coding
description:
  Ribosome maturation factor RimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.


ensembl_gene_id: SAMN02745215_02199
symbol: proS
gene_biotype: protein_coding
description:
  prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves dea [...]


ensembl_gene_id: SAMN02745215_02200
symbol: ispG
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family.


ensembl_gene_id: SAMN02745215_02202
symbol: dxr
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family.


ensembl_gene_id: SAMN02745215_02205
symbol: SHN71830.1
gene_biotype: protein_coding
description:
  Undecaprenyl pyrophosphate synthetase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.


ensembl_gene_id: SAMN02745215_02206
symbol: frr
gene_biotype: protein_coding
description:
  Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.


ensembl_gene_id: SAMN02745215_02208
symbol: tsf
gene_biotype: protein_coding
description:
  Translation elongation factor Ts (EF-Ts); Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.


ensembl_gene_id: SAMN02745215_02211
symbol: codY
gene_biotype: protein_coding
description:
  Transcriptional pleiotropic repressor; DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor; Belongs to the CodY family.


ensembl_gene_id: SAMN02745215_02212
symbol: hslU
gene_biotype: protein_coding
description:
  ATP-dependent HslUV protease ATP-binding subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis.


ensembl_gene_id: SAMN02745215_02213
symbol: hslV
gene_biotype: protein_coding
description:
  ATP dependent peptidase CodWX, CodW component. Threonine peptidase. MEROPS family T01B; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery.


ensembl_gene_id: SAMN02745215_02214
symbol: xerC
gene_biotype: protein_coding
description:
  Tyrosine recombinase XerC subunit; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.


ensembl_gene_id: SAMN02745215_02215
symbol: trmFO
gene_biotype: protein_coding
description:
  methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase; Catalyzes the folate-dependent formation of 5-methyl-uridine at position 54 (M-5-U54) in all tRNAs; Belongs to the MnmG family. TrmFO subfamily.


ensembl_gene_id: SAMN02745215_02216
symbol: topA
gene_biotype: protein_coding
description:
  DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]


ensembl_gene_id: SAMN02745215_02218
symbol: ku
gene_biotype: protein_coding
description:
  DNA end-binding protein Ku; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.


ensembl_gene_id: SAMN02745215_02240
symbol: nuoN
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family.


ensembl_gene_id: SAMN02745215_02243
symbol: nuoK
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit K; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family.


ensembl_gene_id: SAMN02745215_02244
symbol: SHN72053.1
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit J; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: SAMN02745215_02246
symbol: nuoH
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit H; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone.


ensembl_gene_id: SAMN02745215_02247
symbol: nuoD
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family.


ensembl_gene_id: SAMN02745215_02248
symbol: nuoC
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit C; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family.


ensembl_gene_id: SAMN02745215_02249
symbol: nuoB
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit B; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: SAMN02745215_02250
symbol: nuoA
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit A; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family.


ensembl_gene_id: SAMN02745215_02252
symbol: SHN72104.1
gene_biotype: protein_coding
description:
  Ras superfamily GTP-binding protein YlqF; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.


ensembl_gene_id: SAMN02745215_02254
symbol: rplS
gene_biotype: protein_coding
description:
  LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.


ensembl_gene_id: SAMN02745215_02256
symbol: trmD
gene_biotype: protein_coding
description:
  tRNA (Guanine37-N(1)-) methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.


ensembl_gene_id: SAMN02745215_02257
symbol: rimM
gene_biotype: protein_coding
description:
  16S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.


ensembl_gene_id: SAMN02745215_02260
symbol: ffh
gene_biotype: protein_coding
description:
  Signal recognition particle subunit FFH/SRP54 (srp54); Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily.


ensembl_gene_id: SAMN02745215_02261
symbol: SHN72163.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a regulatory protein.


ensembl_gene_id: SAMN02745215_02264
symbol: mtnA
gene_biotype: protein_coding
description:
  Methylthioribose-1-phosphate isomerase; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P).


ensembl_gene_id: SAMN02745215_02265
symbol: SHN72189.1
gene_biotype: protein_coding
description:
  Methylthioadenosine phosphorylase; Purine nucleoside phosphorylase which is highly specific for 6-oxopurine nucleosides. Cleaves guanosine or inosine to respective bases and sugar-1-phosphate molecules. Involved in purine salvage.


ensembl_gene_id: SAMN02745215_02266
symbol: ftsY
gene_biotype: protein_coding
description:
  Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC).


ensembl_gene_id: SAMN02745215_02280
symbol: SHN72277.1
gene_biotype: protein_coding
description:
  CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: SAMN02745215_02318
symbol: smc
gene_biotype: protein_coding
description:
  Condensin subunit Smc; Required for chromosome condensation and partitioning. Belongs to the SMC family.


ensembl_gene_id: SAMN02745215_02319
symbol: rnc
gene_biotype: protein_coding
description:
  RNAse III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.


ensembl_gene_id: SAMN02745215_02320
symbol: SHN72534.1
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.


ensembl_gene_id: SAMN02745215_02323
symbol: SHN72553.1
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: SAMN02745215_02326
symbol: fabH
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.


ensembl_gene_id: SAMN02745215_02327
symbol: plsX
gene_biotype: protein_coding
description:
  Phosphate:acyl-[acyl carrier protein] acyltransferase; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.


ensembl_gene_id: SAMN02745215_02332
symbol: ackA
gene_biotype: protein_coding
description:
  Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.


ensembl_gene_id: SAMN02745215_02337
symbol: gpr
gene_biotype: protein_coding
description:
  Spore protease; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.


ensembl_gene_id: SAMN02745215_02339
symbol: recG
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.


ensembl_gene_id: SAMN02745215_02345
symbol: hslO
gene_biotype: protein_coding
description:
  Molecular chaperone Hsp33; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress.


ensembl_gene_id: SAMN02745215_02348
symbol: rsgA
gene_biotype: protein_coding
description:
  Ribosome biogenesis GTPase; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.


ensembl_gene_id: SAMN02745215_02355
symbol: rlmN
gene_biotype: protein_coding
description:
  23S rRNA m(2)A-2503 methyltransferase; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family.


ensembl_gene_id: SAMN02745215_02356
symbol: SHN72800.1
gene_biotype: protein_coding
description:
  16S rRNA (cytosine967-C5)-methyltransferase; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.


ensembl_gene_id: SAMN02745215_02357
symbol: fmt
gene_biotype: protein_coding
description:
  methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.


ensembl_gene_id: SAMN02745215_02358
symbol: def
gene_biotype: protein_coding
description:
  Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.


ensembl_gene_id: SAMN02745215_02359
symbol: priA
gene_biotype: protein_coding
description:
  Replication restart DNA helicase PriA; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.


ensembl_gene_id: SAMN02745215_02380
symbol: SHN72942.1
gene_biotype: protein_coding
description:
  Antitoxin Phd_YefM, type II toxin-antitoxin system; Antitoxin component of a type II toxin-antitoxin (TA) system.


ensembl_gene_id: SAMN02745215_02397
symbol: metK
gene_biotype: protein_coding
description:
  Methionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.


ensembl_gene_id: SAMN02745215_02398
symbol: SHN73054.1
gene_biotype: protein_coding
description:
  Phosphopantothenate-cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.


ensembl_gene_id: SAMN02745215_02399
symbol: rpoZ
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.


ensembl_gene_id: SAMN02745215_02432
symbol: dapF
gene_biotype: protein_coding
description:
  Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.


ensembl_gene_id: SAMN02745215_02453
symbol: SHN73378.1
gene_biotype: protein_coding
description:
  Predicted component of the ribosome quality control (RQC) complex, YloA/Tae2 family, contains fibronectin-binding (FbpA) and DUF814 domains.


ensembl_gene_id: SAMN02745215_02463
symbol: cas2
gene_biotype: protein_coding
description:
  CRISPR-associated protein, Cas2 family; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.


ensembl_gene_id: SAMN02745215_02464
symbol: cas1
gene_biotype: protein_coding
description:
  CRISPR-associated protein, Cas1 family; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.


ensembl_gene_id: SAMN02745215_02465
symbol: SHN73444.1
gene_biotype: protein_coding
description:
  CRISPR-associated exonuclease, Cas4 family; CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Belongs to the CRISPR-associated exonuclease Cas4 family.


ensembl_gene_id: SAMN02745215_02483
symbol: SHN73541.1
gene_biotype: protein_coding
description:
  CRISPR-associated protein, Cas6 family; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA).


ensembl_gene_id: SAMN02745215_02500
symbol: SHN73633.1
gene_biotype: protein_coding
description:
  Yersiniabactin nonribosomal peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family.


ensembl_gene_id: SAMN02745215_02544
symbol: trpS
gene_biotype: protein_coding
description:
  tryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: SAMN02745215_02620
symbol: SHN75114.1
gene_biotype: protein_coding
description:
  Phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: SAMN02745215_02676
symbol: SHN75433.1
gene_biotype: protein_coding
description:
  Nucleoside ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: SAMN02745215_02690
symbol: SHN75515.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid:cation transporter, LIVCS family; Component of the transport system for branched-chain amino acids.


ensembl_gene_id: SAMN02745215_02702
symbol: SHN75582.1
gene_biotype: protein_coding
description:
  2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family.


ensembl_gene_id: SAMN02745215_02708
symbol: ung
gene_biotype: protein_coding
description:
  Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.


ensembl_gene_id: SAMN02745215_02823
symbol: SHN76288.1
gene_biotype: protein_coding
description:
  Cation diffusion facilitator family transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.


ensembl_gene_id: SAMN02745215_02829
symbol: plsY
gene_biotype: protein_coding
description:
  Acyl-phosphate glycerol-3-phosphate acyltransferase; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.


ensembl_gene_id: SAMN02745215_02831
symbol: mscL
gene_biotype: protein_coding
description:
  Large conductance mechanosensitive channel; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell.


ensembl_gene_id: SAMN02745215_02832
symbol: SHN76348.1
gene_biotype: protein_coding
description:
  23S rRNA pseudouridine1911/1915/1917 synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: SAMN02745215_02919
symbol: larC
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2+), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor-dependent enzymes. Belongs to the LarC family.


ensembl_gene_id: SAMN02745215_02925
symbol: tatA
gene_biotype: protein_coding
description:
  Sec-independent protein translocase protein TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.


ensembl_gene_id: SAMN02745215_02934
symbol: hemC
gene_biotype: protein_coding
description:
  Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.


ensembl_gene_id: SAMN02745215_02935
symbol: hemA
gene_biotype: protein_coding
description:
  glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).


ensembl_gene_id: SAMN02745215_02943
symbol: tatC
gene_biotype: protein_coding
description:
  Sec-independent protein translocase TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes.


ensembl_gene_id: SAMN02745215_02945
symbol: speH
gene_biotype: protein_coding
description:
  Adenosylmethionine decarboxylase proenzyme; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the prokaryotic AdoMetDC family. Type 1 subfamily.


ensembl_gene_id: SAMN02745215_02960
symbol: SHN77937.1
gene_biotype: protein_coding
description:
  Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.


ensembl_gene_id: SAMN02745215_02961
symbol: gpsA
gene_biotype: protein_coding
description:
  Glycerol 3-phosphate dehydrogenase (NAD(P)+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: SAMN02745215_02963
symbol: der
gene_biotype: protein_coding
description:
  GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.


ensembl_gene_id: SAMN02745215_02967
symbol: ispH
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.


ensembl_gene_id: SAMN02745215_02972
symbol: SHN78018.1
gene_biotype: protein_coding
description:
  Lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.


ensembl_gene_id: SAMN02745215_02973
symbol: aroA
gene_biotype: protein_coding
description:
  3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.


ensembl_gene_id: SAMN02745215_02976
symbol: SHN78037.1
gene_biotype: protein_coding
description:
  Chorismate mutase; Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis.


ensembl_gene_id: SAMN02745215_02978
symbol: nhaA
gene_biotype: protein_coding
description:
  Sodium/proton antiporter, NhaA family; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family.


ensembl_gene_id: SAMN02745215_02990
symbol: SHN78102.1
gene_biotype: protein_coding
description:
  Ribosomal large subunit pseudouridine synthase B; Belongs to the pseudouridine synthase RsuA family.


ensembl_gene_id: SAMN02745215_02999
symbol: scpB
gene_biotype: protein_coding
description:
  Condensin subunit ScpB; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: SAMN02745215_03000
symbol: scpA
gene_biotype: protein_coding
description:
  Condensin subunit ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: SAMN02745215_03003
symbol: SHN78167.1
gene_biotype: protein_coding
description:
  tRNA nucleotidyltransferase (CCA-adding enzyme); Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.


ensembl_gene_id: SAMN02745215_03015
symbol: spoIIAB
gene_biotype: protein_coding
description:
  Stage II sporulation protein AB (anti-sigma F factor); Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition.


ensembl_gene_id: SAMN02745215_03016
symbol: SHN78236.1
gene_biotype: protein_coding
description:
  RNA polymerase, sigma subunit, RpoX/SigF; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: SAMN02745215_03020
symbol: SHN78255.1
gene_biotype: protein_coding
description:
  Purine-nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.


ensembl_gene_id: SAMN02745215_03021
symbol: deoB
gene_biotype: protein_coding
description:
  Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family.


ensembl_gene_id: SAMN02745215_03022
symbol: xerC-2
gene_biotype: protein_coding
description:
  Tyrosine recombinase XerD subunit; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.


ensembl_gene_id: SAMN02745215_03049
symbol: SHN78385.1
gene_biotype: protein_coding
description:
  Response regulator receiver protein; May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process.


ensembl_gene_id: SAMN02745215_03054
symbol: nadK
gene_biotype: protein_coding
description:
  NAD+ kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.


ensembl_gene_id: SAMN02745215_03056
symbol: dxs
gene_biotype: protein_coding
description:
  Transketolase subunit B; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.


ensembl_gene_id: SAMN02745215_03060
symbol: xseB
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.


ensembl_gene_id: SAMN02745215_03061
symbol: xseA
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.


ensembl_gene_id: SAMN02745215_03072
symbol: nusB
gene_biotype: protein_coding
description:
  NusB antitermination factor; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.


ensembl_gene_id: SAMN02745215_03075
symbol: SHN78537.1
gene_biotype: protein_coding
description:
  Biotin carboxylase /acetyl-CoA carboxylase carboxyltransferase subunit alpha; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: SAMN02745215_03086
symbol: efp
gene_biotype: protein_coding
description:
  Translation elongation factor P (EF-P); Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.


ensembl_gene_id: SAMN02745215_03087
symbol: aroQ
gene_biotype: protein_coding
description:
  3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.


ensembl_gene_id: SAMN02745215_03091
symbol: SHN78612.1
gene_biotype: protein_coding
description:
  Leader peptidase (prepilin peptidase) / N-methyltransferase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.


ensembl_gene_id: SAMN02745215_03099
symbol: aroB
gene_biotype: protein_coding
description:
  3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).


ensembl_gene_id: SAMN02745215_03100
symbol: aroK
gene_biotype: protein_coding
description:
  Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.


ensembl_gene_id: SAMN02745215_03101
symbol: aroC
gene_biotype: protein_coding
description:
  Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.


ensembl_gene_id: SAMN02745215_03103
symbol: aroE
gene_biotype: protein_coding
description:
  Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).


ensembl_gene_id: SAMN02745215_03105
symbol: psd
gene_biotype: protein_coding
description:
  Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).


ensembl_gene_id: SAMN02745215_03112
symbol: SHN78695.1
gene_biotype: protein_coding
description:
  RNA polymerase, sigma 27/28 subunit, RpsK/SigK; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: SAMN02745215_03116
symbol: SHN78707.1
gene_biotype: protein_coding
description:
  Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase.


ensembl_gene_id: SAMN02745215_03120
symbol: mltG
gene_biotype: protein_coding
description:
  UPF0755 protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation.


ensembl_gene_id: SAMN02745215_03123
symbol: SHN78730.1
gene_biotype: protein_coding
description:
  Putative holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.


ensembl_gene_id: SAMN02745215_03126
symbol: alaS
gene_biotype: protein_coding
description:
  alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.


ensembl_gene_id: SAMN02745215_03135
symbol: mnmA
gene_biotype: protein_coding
description:
  tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.


ensembl_gene_id: SAMN02745215_03137
symbol: iscS
gene_biotype: protein_coding
description:
  Cysteine desulfurase; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily.


ensembl_gene_id: SAMN02745215_03142
symbol: aspS
gene_biotype: protein_coding
description:
  aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.


ensembl_gene_id: SAMN02745215_03162
symbol: dtd
gene_biotype: protein_coding
description:
  D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family.


ensembl_gene_id: SAMN02745215_03163
symbol: SHN78890.1
gene_biotype: protein_coding
description:
  (p)ppGpp synthetase I, SpoT/RelA; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.


ensembl_gene_id: SAMN02745215_03164
symbol: apt
gene_biotype: protein_coding
description:
  Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.


ensembl_gene_id: SAMN02745215_03171
symbol: secF
gene_biotype: protein_coding
description:
  Protein translocase subunit secF /protein translocase subunit secD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.


ensembl_gene_id: SAMN02745215_03175
symbol: tgt
gene_biotype: protein_coding
description:
  tRNA-guanine transglycosylase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the [...]


ensembl_gene_id: SAMN02745215_03176
symbol: queA
gene_biotype: protein_coding
description:
  S-adenosylmethionine--tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).


ensembl_gene_id: SAMN02745215_03178
symbol: ruvB
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase subunit RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.


ensembl_gene_id: SAMN02745215_03179
symbol: ruvA
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase subunit RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.


ensembl_gene_id: SAMN02745215_03180
symbol: ruvC
gene_biotype: protein_coding
description:
  Holliday junction endonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.


ensembl_gene_id: SAMN02745215_03184
symbol: SHN78955.1
gene_biotype: protein_coding
description:
  Respiratory nitrite reductase (cytochrome ammonia-forming) precursor; Belongs to the cytochrome c-552 family.


ensembl_gene_id: SAMN02745215_03237
symbol: SHN79616.1
gene_biotype: protein_coding
description:
  UDP-N-acetyl-D-glucosamine dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.


ensembl_gene_id: SAMN02745215_03238
symbol: SHN79622.1
gene_biotype: protein_coding
description:
  NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC.


ensembl_gene_id: SAMN02745215_03244
symbol: SHN79650.1
gene_biotype: protein_coding
description:
  2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.


ensembl_gene_id: SAMN02745215_03258
symbol: SHN79706.1
gene_biotype: protein_coding
description:
  Hydrophobic/amphiphilic exporter-1, HAE1 family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: SAMN02745215_03259
symbol: SHN79711.1
gene_biotype: protein_coding
description:
  RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: SAMN02745215_03297
symbol: SHN79881.1
gene_biotype: protein_coding
description:
  Molybdate transport system permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: SAMN02745215_03300
symbol: dapL
gene_biotype: protein_coding
description:
  LL-diaminopimelate aminotransferase apoenzyme; Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL- diaminopimelate.


ensembl_gene_id: SAMN02745215_03314
symbol: serC
gene_biotype: protein_coding
description:
  Phosphoserine aminotransferase apoenzyme; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine.


ensembl_gene_id: SAMN02745215_03317
symbol: metAA
gene_biotype: protein_coding
description:
  Homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family.


ensembl_gene_id: SAMN02745215_03330
symbol: msrA
gene_biotype: protein_coding
description:
  Peptide methionine sulfoxide reductase msrA/msrB; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.


ensembl_gene_id: SAMN02745215_03385
symbol: gatB
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily.


ensembl_gene_id: SAMN02745215_03386
symbol: gatA
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).


ensembl_gene_id: SAMN02745215_03387
symbol: gatC
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.


ensembl_gene_id: SAMN02745215_03460
symbol: dnaG
gene_biotype: protein_coding
description:
  DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.


ensembl_gene_id: SAMN02745215_03461
symbol: sigA
gene_biotype: protein_coding
description:
  RNA polymerase, sigma 70 subunit, RpoD /RNA polymerase, sigma 38 subunit, RpoS; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.


ensembl_gene_id: SAMN02745215_03466
symbol: SHN80826.1
gene_biotype: protein_coding
description:
  Dinuclear metal center protein, YbgI/SA1388 family; Belongs to the GTP cyclohydrolase I type 2/NIF3 family.


ensembl_gene_id: SAMN02745215_03473
symbol: SHN80853.1
gene_biotype: protein_coding
description:
  Citrate lyase subunit gamma (acyl carrier protein); Covalent carrier of the coenzyme of citrate lyase.


ensembl_gene_id: SAMN02745215_03489
symbol: fliW
gene_biotype: protein_coding
description:
  Flagellar assembly factor FliW; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum.


ensembl_gene_id: SAMN02745215_03490
symbol: csrA
gene_biotype: protein_coding
description:
  Carbon storage regulator, CsrA; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW.


ensembl_gene_id: SAMN02745215_03492
symbol: SHN80938.1
gene_biotype: protein_coding
description:
  Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.


ensembl_gene_id: SAMN02745215_03495
symbol: SHN80952.1
gene_biotype: protein_coding
description:
  Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.


ensembl_gene_id: SAMN02745215_03504
symbol: cheB
gene_biotype: protein_coding
description:
  Response regulator receiver modulated CheB methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.


ensembl_gene_id: SAMN02745215_03507
symbol: SHN81005.1
gene_biotype: protein_coding
description:
  Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.


ensembl_gene_id: SAMN02745215_03513
symbol: SHN81026.1
gene_biotype: protein_coding
description:
  Flagellar FliL protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.


ensembl_gene_id: SAMN02745215_03518
symbol: fliP
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.


ensembl_gene_id: SAMN02745215_03519
symbol: fliQ
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.


ensembl_gene_id: SAMN02745215_03520
symbol: SHN81054.1
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family.


ensembl_gene_id: SAMN02745215_03521
symbol: flhB
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family.


ensembl_gene_id: SAMN02745215_03522
symbol: flhA
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.


ensembl_gene_id: SAMN02745215_03527
symbol: cheD
gene_biotype: protein_coding
description:
  CheD, stimulates methylation of MCP proteins; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.


ensembl_gene_id: SAMN02745215_03534
symbol: SHN81105.1
gene_biotype: protein_coding
description:
  Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.


ensembl_gene_id: SAMN02745215_03539
symbol: SHN81124.1
gene_biotype: protein_coding
description:
  Sulfate transport system permease protein; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import.


ensembl_gene_id: SAMN02745215_03541
symbol: cysA
gene_biotype: protein_coding
description:
  Sulfate transport system ATP-binding protein; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system.


ensembl_gene_id: SAMN02745215_03545
symbol: SHN81146.1
gene_biotype: protein_coding
description:
  Adenylylsulfate kinase /sulfate adenylyltransferase subunit 1; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.


ensembl_gene_id: SAMN02745215_03549
symbol: SHN81160.1
gene_biotype: protein_coding
description:
  Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.


ensembl_gene_id: SAMN02745215_03558
symbol: SHN81194.1
gene_biotype: protein_coding
description:
  Molybdopterin molybdochelatase; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.


ensembl_gene_id: SAMN02745215_03573
symbol: SHN81262.1
gene_biotype: protein_coding
description:
  UPF0342 protein SAMN02745215_03573; Cell fate regulator YlbF, YheA/YmcA/DUF963 family (controls sporulation, competence, biofilm development); Belongs to the UPF0342 family.


ensembl_gene_id: SAMN02745215_03583
symbol: rsmH
gene_biotype: protein_coding
description:
  16S rRNA (cytosine1402-N4)-methyltransferase; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.


ensembl_gene_id: SAMN02745215_03586
symbol: murE
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily.


ensembl_gene_id: SAMN02745215_03588
symbol: mraY
gene_biotype: protein_coding
description:
  Phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.


ensembl_gene_id: SAMN02745215_03589
symbol: murD
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.


ensembl_gene_id: SAMN02745215_03591
symbol: murG
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine-N- acetylmuramylpentapeptide N-acetylglucosamine transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.


ensembl_gene_id: SAMN02745215_03597
symbol: ftsZ
gene_biotype: protein_coding
description:
  Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.


ensembl_gene_id: SAMN02745215_03599
symbol: SHN81377.1
gene_biotype: protein_coding
description:
  Sporulation factor SpoIIGA. Unknown type peptidase. MEROPS family U04; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family.


ensembl_gene_id: SAMN02745215_03600
symbol: SHN81382.1
gene_biotype: protein_coding
description:
  RNA polymerase, sigma 29 subunit, SigE; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: SAMN02745215_03601
symbol: SHN81387.1
gene_biotype: protein_coding
description:
  RNA polymerase, sigma subunit, RpsG/SigG; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: SAMN02745215_03607
symbol: SHN81417.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.


ensembl_gene_id: SAMN02745215_03608
symbol: sepF
gene_biotype: protein_coding
description:
  Cell division inhibitor SepF; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA.


ensembl_gene_id: SAMN02745215_03612
symbol: ileS
gene_biotype: protein_coding
description:
  Isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily.


ensembl_gene_id: SAMN02745215_03617
symbol: gcvH
gene_biotype: protein_coding
description:
  Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.


ensembl_gene_id: SAMN02745215_03618
symbol: gcvPA
gene_biotype: protein_coding
description:
  Glycine dehydrogenase (decarboxylating) alpha subunit; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein.


ensembl_gene_id: SAMN02745215_03619
symbol: gcvPB
gene_biotype: protein_coding
description:
  Glycine dehydrogenase (decarboxylating) beta subunit; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. C-terminal subunit subfamily.


ensembl_gene_id: SAMN02745215_03620
symbol: SHN81466.1
gene_biotype: protein_coding
description:
  Putative phosphotransacetylase; Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate.


ensembl_gene_id: SAMN02745215_03625
symbol: menA
gene_biotype: protein_coding
description:
  1,4-dihydroxy-2-naphthoate prenyltransferase; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily.


ensembl_gene_id: SAMN02745215_03641
symbol: lspA
gene_biotype: protein_coding
description:
  Signal peptidase II; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.


ensembl_gene_id: SAMN02745215_03642
symbol: SHN81534.1
gene_biotype: protein_coding
description:
  Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: SAMN02745215_03644
symbol: pyrR
gene_biotype: protein_coding
description:
  Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant; Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrR subfamily.


ensembl_gene_id: SAMN02745215_03645
symbol: pyrB
gene_biotype: protein_coding
description:
  Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.


ensembl_gene_id: SAMN02745215_03646
symbol: pyrC
gene_biotype: protein_coding
description:
  Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.


ensembl_gene_id: SAMN02745215_03651
symbol: pyrF
gene_biotype: protein_coding
description:
  Orotidine-5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily.


ensembl_gene_id: SAMN02745215_03652
symbol: pyrE
gene_biotype: protein_coding
description:
  Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).


ensembl_gene_id: SAMN02745215_03668
symbol: SHN81810.1
gene_biotype: protein_coding
description:
  Formate dehydrogenase major subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: SAMN02745215_03710
symbol: rimO
gene_biotype: protein_coding
description:
  SSU ribosomal protein S12P methylthiotransferase; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.


ensembl_gene_id: SAMN02745215_03724
symbol: recA
gene_biotype: protein_coding
description:
  Recombination protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.


ensembl_gene_id: SAMN02745215_03726
symbol: rny
gene_biotype: protein_coding
description:
  Metal dependent phosphohydrolase; Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family.


ensembl_gene_id: SAMN02745215_03743
symbol: sucD-2
gene_biotype: protein_coding
description:
  succinyl-CoA synthetase alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.


ensembl_gene_id: SAMN02745215_03763
symbol: menG
gene_biotype: protein_coding
description:
  Demethylmenaquinone methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2).


ensembl_gene_id: SAMN02745215_03773
symbol: nth
gene_biotype: protein_coding
description:
  DNA-(apurinic or apyrimidinic site) lyase; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.


ensembl_gene_id: SAMN02745215_03783
symbol: ahcY
gene_biotype: protein_coding
description:
  Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.


ensembl_gene_id: SAMN02745215_03792
symbol: uvrC
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.


ensembl_gene_id: SAMN02745215_03809
symbol: SHN82389.1
gene_biotype: protein_coding
description:
  CDP-diacylglycerol---serine O-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: SAMN02745215_03813
symbol: SHN82407.1
gene_biotype: protein_coding
description:
  Hybrid cluster protein-associated redox disulfide domain-containing protein; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.


ensembl_gene_id: SAMN02745215_03822
symbol: tmk
gene_biotype: protein_coding
description:
  Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.


ensembl_gene_id: SAMN02745215_03839
symbol: SHN82519.1
gene_biotype: protein_coding
description:
  Manganese/iron transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family.


ensembl_gene_id: SAMN02745215_03840
symbol: SHN82523.1
gene_biotype: protein_coding
description:
  Peptidyl-prolyl cis-trans isomerase B (cyclophilin B); PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.


ensembl_gene_id: SAMN02745215_03842
symbol: pfkA
gene_biotype: protein_coding
description:
  6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.


ensembl_gene_id: SAMN02745215_03859
symbol: surE
gene_biotype: protein_coding
description:
  5'-nucleotidase /3'-nucleotidase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.


ensembl_gene_id: SAMN02745215_03863
symbol: SHN82613.1
gene_biotype: protein_coding
description:
  Beta-aspartyl-dipeptidase (metallo-type); Catalyzes the hydrolytic cleavage of a subset of L- isoaspartyl (L-beta-aspartyl) dipeptides. Used to degrade proteins damaged by L-isoaspartyl residues formation. Belongs to the peptidase M38 family.


ensembl_gene_id: SAMN02745215_03895
symbol: potA
gene_biotype: protein_coding
description:
  Spermidine/putrescine transport system ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.


ensembl_gene_id: SAMN02745215_03951
symbol: pfkA-2
gene_biotype: protein_coding
description:
  6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. Mixed-substrate PFK group III subfamily.


ensembl_gene_id: SAMN02745215_03958
symbol: SHN83126.1
gene_biotype: protein_coding
description:
  Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like/2,3-diketo-5-methylthio-1-phosphopentane phosphatase.


ensembl_gene_id: SAMN02745215_03959
symbol: thiE
gene_biotype: protein_coding
description:
  Thiamine-phosphate diphosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.


ensembl_gene_id: SAMN02745215_03960
symbol: thiM
gene_biotype: protein_coding
description:
  Hydroxyethylthiazole kinase; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family.


ensembl_gene_id: SAMN02745215_03961
symbol: thiC
gene_biotype: protein_coding
description:
  Hydroxymethylpyrimidine synthase; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. Belongs to the ThiC family.


ensembl_gene_id: SAMN02745215_03963
symbol: SHN83143.1
gene_biotype: protein_coding
description:
  3-deoxy-D-arabinoheptulosonate-7-phosphate synthase; Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino- heptulosonate-7-phosphate (DAHP).


ensembl_gene_id: SAMN02745215_03979
symbol: proA
gene_biotype: protein_coding
description:
  Glutamate-5-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.


ensembl_gene_id: SAMN02745215_03980
symbol: proB
gene_biotype: protein_coding
description:
  Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.


ensembl_gene_id: SAMN02745215_03981
symbol: proC
gene_biotype: protein_coding
description:
  Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.


ensembl_gene_id: SAMN02745215_03997
symbol: leuB
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.


ensembl_gene_id: SAMN02745215_03998
symbol: leuD
gene_biotype: protein_coding
description:
  3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 2 subfamily.


ensembl_gene_id: SAMN02745215_03999
symbol: leuC
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydratase, large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.


ensembl_gene_id: SAMN02745215_04000
symbol: ilvC
gene_biotype: protein_coding
description:
  Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate.


ensembl_gene_id: SAMN02745215_04004
symbol: ilvE
gene_biotype: protein_coding
description:
  Branched chain amino acid aminotransferase apoenzyme; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: SAMN02745215_04007
symbol: thrB
gene_biotype: protein_coding
description:
  Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily.


ensembl_gene_id: SAMN02745215_04024
symbol: coaE
gene_biotype: protein_coding
description:
  dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.


ensembl_gene_id: SAMN02745215_04027
symbol: mutM
gene_biotype: protein_coding
description:
  DNA-(apurinic or apyrimidinic site) lyase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates.


ensembl_gene_id: SAMN02745215_04028
symbol: polA
gene_biotype: protein_coding
description:
  DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.


ensembl_gene_id: SAMN02745215_04060
symbol: accA
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase carboxyltransferase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.


ensembl_gene_id: SAMN02745215_04061
symbol: accD
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase carboxyltransferase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.


ensembl_gene_id: SAMN02745215_04063
symbol: coaD
gene_biotype: protein_coding
description:
  Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.


ensembl_gene_id: SAMN02745215_04069
symbol: SHN83583.1
gene_biotype: protein_coding
description:
  tRNA (cytidine/uridine-2'-O-)-methyltransferase; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.


ensembl_gene_id: SAMN02745215_04079
symbol: SHN83842.1
gene_biotype: protein_coding
description:
  Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain-containing protein; Belongs to the ABC transporter superfamily.


ensembl_gene_id: SAMN02745215_04100
symbol: SHN83904.1
gene_biotype: protein_coding
description:
  Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.


ensembl_gene_id: SAMN02745215_04156
symbol: lexA
gene_biotype: protein_coding
description:
  SOS-response transcriptional repressor, LexA; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair.


ensembl_gene_id: SAMN02745215_04161
symbol: hflX
gene_biotype: protein_coding
description:
  GTP-binding protein HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.


ensembl_gene_id: SAMN02745215_04164
symbol: hfq
gene_biotype: protein_coding
description:
  RNA-binding protein Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family.


ensembl_gene_id: SAMN02745215_04165
symbol: miaA
gene_biotype: protein_coding
description:
  tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.


ensembl_gene_id: SAMN02745215_04167
symbol: mutL
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.


ensembl_gene_id: SAMN02745215_04170
symbol: mutS
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.


ensembl_gene_id: SAMN02745215_04171
symbol: SHN84173.1
gene_biotype: protein_coding
description:
  UPF0342 protein SAMN02745215_04171; Cell fate regulator YlbF, YheA/YmcA/DUF963 family (controls sporulation, competence, biofilm development); Belongs to the UPF0342 family.


ensembl_gene_id: SAMN02745215_04172
symbol: miaB
gene_biotype: protein_coding
description:
  tRNA-i(6)A37 thiotransferase enzyme MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.


ensembl_gene_id: SAMN02745215_04187
symbol: SHN84232.1
gene_biotype: protein_coding
description:
  Glyceraldehyde-3-phosphate dehydrogenase (NAD+); Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: SAMN02745215_04193
symbol: SHN84253.1
gene_biotype: protein_coding
description:
  Molybdenum cofactor cytidylyltransferase; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.


ensembl_gene_id: SAMN02745215_04224
symbol: SHN84373.1
gene_biotype: protein_coding
description:
  CO-methylating acetyl-CoA synthase corrinoid iron-sulfur protein small subunit precursor /acetyl-CoA decarbonylase/synthase delta subunit.


ensembl_gene_id: SAMN02745215_04241
symbol: SHN84440.1
gene_biotype: protein_coding
description:
  Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.


ensembl_gene_id: SAMN02745215_04243
symbol: ribBA
gene_biotype: protein_coding
description:
  3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.


ensembl_gene_id: SAMN02745215_04244
symbol: ribH
gene_biotype: protein_coding
description:
  6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.


ensembl_gene_id: SAMN02745215_04245
symbol: SHN84458.1
gene_biotype: protein_coding
description:
  RNA polymerase, sigma-24 subunit, RpoE /RNA polymerase, sigma 30 subunit, SigH; Belongs to the sigma-70 factor family.


ensembl_gene_id: SAMN02745215_04248
symbol: clpB
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease ATP-binding subunit ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.


ensembl_gene_id: SAMN02745215_04311
symbol: cobS
gene_biotype: protein_coding
description:
  Cobalamin-5'-phosphate synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.


ensembl_gene_id: SAMN02745215_04313
symbol: cobT
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB).


ensembl_gene_id: SAMN02745215_04334
symbol: crcB
gene_biotype: protein_coding
description:
  Camphor resistance protein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.


ensembl_gene_id: SAMN02745215_04345
symbol: prfC
gene_biotype: protein_coding
description:
  Bacterial peptide chain release factor 3 (bRF-3); Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.


ensembl_gene_id: SAMN02745215_04369
symbol: SHN85148.1
gene_biotype: protein_coding
description:
  Multidrug efflux pump subunit AcrB; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: SAMN02745215_04377
symbol: pepT
gene_biotype: protein_coding
description:
  Peptidase T. Metallo peptidase. MEROPS family M20B; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family.


ensembl_gene_id: SAMN02745215_04386
symbol: queC
gene_biotype: protein_coding
description:
  preQ(0) biosynthesis protein QueC; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)).


ensembl_gene_id: SAMN02745215_04405
symbol: glgB
gene_biotype: protein_coding
description:
  1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.


ensembl_gene_id: SAMN02745215_04406
symbol: SHN85275.1
gene_biotype: protein_coding
description:
  Starch phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.


ensembl_gene_id: SAMN02745215_04407
symbol: glgC
gene_biotype: protein_coding
description:
  Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.


ensembl_gene_id: SAMN02745215_04434
symbol: SHN85357.1
gene_biotype: protein_coding
description:
  Heavy metal efflux pump, CzcA family/hydrophobe/amphiphile efflux-1 (HAE1) family protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: SAMN02745215_04439
symbol: trmB
gene_biotype: protein_coding
description:
  tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.


ensembl_gene_id: SAMN02745215_04465
symbol: clpX
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.


ensembl_gene_id: SAMN02745215_04468
symbol: trpA
gene_biotype: protein_coding
description:
  Tryptophan synthase, alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.


ensembl_gene_id: SAMN02745215_04469
symbol: trpB
gene_biotype: protein_coding
description:
  Tryptophan synthase, beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.


ensembl_gene_id: SAMN02745215_04470
symbol: trpD
gene_biotype: protein_coding
description:
  Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).


ensembl_gene_id: SAMN02745215_04475
symbol: lon
gene_biotype: protein_coding
description:
  ATP-dependent proteinase. Serine peptidase. MEROPS family S16; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.


ensembl_gene_id: SAMN02745215_04476
symbol: engB
gene_biotype: protein_coding
description:
  GTP-binding protein; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.


ensembl_gene_id: SAMN02745215_04483
symbol: valS
gene_biotype: protein_coding
description:
  valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.


ensembl_gene_id: SAMN02745215_04485
symbol: SHN85735.1
gene_biotype: protein_coding
description:
  Dihydrofolate synthase / folylpolyglutamate synthase; Belongs to the folylpolyglutamate synthase family.


ensembl_gene_id: SAMN02745215_04489
symbol: rex
gene_biotype: protein_coding
description:
  Redox-sensing transcriptional repressor; Modulates transcription in response to changes in cellular NADH/NAD(+) redox state.


ensembl_gene_id: SAMN02745215_04492
symbol: SHN85765.1
gene_biotype: protein_coding
description:
  Septum formation protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.


ensembl_gene_id: SAMN02745215_04498
symbol: minC
gene_biotype: protein_coding
description:
  Septum site-determining protein MinC; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family.


ensembl_gene_id: SAMN02745215_04500
symbol: minE
gene_biotype: protein_coding
description:
  Cell division topological specificity factor MinE; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell.


ensembl_gene_id: SAMN02745215_04501
symbol: rodA
gene_biotype: protein_coding
description:
  Rod shape determining protein RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.


ensembl_gene_id: SAMN02745215_04508
symbol: rplU
gene_biotype: protein_coding
description:
  LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.


ensembl_gene_id: SAMN02745215_04512
symbol: obg
gene_biotype: protein_coding
description:
  GTP-binding protein; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.


ensembl_gene_id: SAMN02745215_04514
symbol: nadD
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).


ensembl_gene_id: SAMN02745215_04517
symbol: rsfS
gene_biotype: protein_coding
description:
  Ribosome-associated protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.


ensembl_gene_id: SAMN02745215_04523
symbol: SHN85891.1
gene_biotype: protein_coding
description:
  Choline/glycine/proline betaine transport protein; Belongs to the BCCT transporter (TC 2.A.15) family.


ensembl_gene_id: SAMN02745215_04536
symbol: murJ
gene_biotype: protein_coding
description:
  Putative peptidoglycan lipid II flippase; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.


ensembl_gene_id: SAMN02745215_04541
symbol: lepA
gene_biotype: protein_coding
description:
  GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.


ensembl_gene_id: SAMN02745215_04542
symbol: SHN85953.1
gene_biotype: protein_coding
description:
  Oxygen-independent coproporphyrinogen-3 oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: SAMN02745215_04546
symbol: hrcA
gene_biotype: protein_coding
description:
  Heat-inducible transcription repressor HrcA; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons.


ensembl_gene_id: SAMN02745215_04547
symbol: grpE
gene_biotype: protein_coding
description:
  Molecular chaperone GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP [...]


ensembl_gene_id: SAMN02745215_04549
symbol: dnaJ
gene_biotype: protein_coding
description:
  Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...]


ensembl_gene_id: SAMN02745215_04550
symbol: prmA
gene_biotype: protein_coding
description:
  [LSU ribosomal protein L11P]-lysine N-methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family.


ensembl_gene_id: SAMN02745215_04551
symbol: SHN85983.1
gene_biotype: protein_coding
description:
  16S rRNA (uracil1498-N3)-methyltransferase; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.


ensembl_gene_id: SAMN02745215_04569
symbol: ybeY
gene_biotype: protein_coding
description:
  Probable rRNA maturation factor; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.


ensembl_gene_id: SAMN02745215_04571
symbol: SHN86061.1
gene_biotype: protein_coding
description:
  Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: SAMN02745215_04572
symbol: era
gene_biotype: protein_coding
description:
  GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.


ensembl_gene_id: SAMN02745215_04573
symbol: deoC
gene_biotype: protein_coding
description:
  Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.


ensembl_gene_id: SAMN02745215_04578
symbol: SHN86087.1
gene_biotype: protein_coding
description:
  Formate dehydrogenase (quinone-dependent) catalytic subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: SAMN02745215_04583
symbol: selA
gene_biotype: protein_coding
description:
  L-seryl-tRNA(Sec) selenium transferase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis.


ensembl_gene_id: SAMN02745215_04600
symbol: SHN86174.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation/dephosphorylation.


ensembl_gene_id: SAMN02745215_04614
symbol: SHN86387.1
gene_biotype: protein_coding
description:
  Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family; Antitoxin component of a type II toxin-antitoxin (TA) system.


ensembl_gene_id: SAMN02745215_04683
symbol: purE
gene_biotype: protein_coding
description:
  5-(carboxyamino)imidazole ribonucleotide mutase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).


ensembl_gene_id: SAMN02745215_04686
symbol: purF
gene_biotype: protein_coding
description:
  Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.


ensembl_gene_id: SAMN02745215_04688
symbol: purN
gene_biotype: protein_coding
description:
  Formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.


ensembl_gene_id: SAMN02745215_04697
symbol: metN
gene_biotype: protein_coding
description:
  D-methionine transport system ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.


ensembl_gene_id: SAMN02745215_04700
symbol: hisZ
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase regulatory subunit; Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine.


ensembl_gene_id: SAMN02745215_04702
symbol: hisG
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase catalytic subunit; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Short subfamily.


ensembl_gene_id: SAMN02745215_04703
symbol: hisD
gene_biotype: protein_coding
description:
  Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.


ensembl_gene_id: SAMN02745215_04704
symbol: hisC
gene_biotype: protein_coding
description:
  Histidinol phosphate aminotransferase apoenzyme; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.


ensembl_gene_id: SAMN02745215_04706
symbol: hisH
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase subunit hisH; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.


ensembl_gene_id: SAMN02745215_04707
symbol: hisA
gene_biotype: protein_coding
description:
  1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase.


ensembl_gene_id: SAMN02745215_04708
symbol: hisF
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase subunit hisF; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.


ensembl_gene_id: SAMN02745215_04710
symbol: SHN86740.1
gene_biotype: protein_coding
description:
  Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.


ensembl_gene_id: SAMN02745215_04720
symbol: SHN86773.1
gene_biotype: protein_coding
description:
  Thiosulfate reductase / polysulfide reductase chain A; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: SAMN02745215_04727
symbol: ligA
gene_biotype: protein_coding
description:
  DNA ligase (NAD+); DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA.


ensembl_gene_id: SAMN02745215_04733
symbol: SHN86827.1
gene_biotype: protein_coding
description:
  Isocitrate dehydrogenase (NADP); Belongs to the isocitrate and isopropylmalate dehydrogenases family.


ensembl_gene_id: SAMN02745215_04745
symbol: dapA-2
gene_biotype: protein_coding
description:
  4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).


ensembl_gene_id: SAMN02745215_04782
symbol: nadA
gene_biotype: protein_coding
description:
  Quinolinate synthetase; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.


ensembl_gene_id: SAMN02745215_04922
symbol: speE-2
gene_biotype: protein_coding
description:
  Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine; Belongs to the spermidine/spermine synthase family.


ensembl_gene_id: SAMN02745215_04926
symbol: thrS
gene_biotype: protein_coding
description:
  Ser-tRNA(Thr) hydrolase /threonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr).


ensembl_gene_id: SAMN02745215_04928
symbol: SHN87605.1
gene_biotype: protein_coding
description:
  Diaminopimelate dehydrogenase; Catalyzes the reversible NADPH-dependent reductive amination of L-2-amino-6-oxopimelate, the acyclic form of L- tetrahydrodipicolinate, to generate the meso compound, D,L-2,6- diaminopimelate.


ensembl_gene_id: SAMN02745215_04957
symbol: infC
gene_biotype: protein_coding
description:
  Bacterial translation initiation factor 3 (bIF-3); IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.


ensembl_gene_id: SAMN02745215_04959
symbol: rplT
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.


ensembl_gene_id: SAMN02745215_04960
symbol: SHN87687.1
gene_biotype: protein_coding
description:
  RNA methyltransferase, TrmH family; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: SAMN02745215_04966
symbol: kup
gene_biotype: protein_coding
description:
  KUP system potassium uptake protein; Transport of potassium into the cell; Belongs to the HAK/KUP transporter (TC 2.A.72) family.


ensembl_gene_id: SAMN02745215_04969
symbol: kdpA
gene_biotype: protein_coding
description:
  K+-transporting ATPase ATPase A chain; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane.


ensembl_gene_id: SAMN02745215_04970
symbol: kdpB
gene_biotype: protein_coding
description:
  K+-transporting ATPase ATPase B chain; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system. Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IA subfamily.


ensembl_gene_id: SAMN02745215_04971
symbol: kdpC
gene_biotype: protein_coding
description:
  K+-transporting ATPase ATPase C chain; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP-binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB/KdpC/ATP ternary complex.


ensembl_gene_id: SAMN02745215_04973
symbol: pheS
gene_biotype: protein_coding
description:
  phenylalanyl-tRNA synthetase, alpha subunit; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.


ensembl_gene_id: SAMN02745215_04974
symbol: pheT
gene_biotype: protein_coding
description:
  phenylalanyl-tRNA synthetase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.


ensembl_gene_id: SAMN02745215_04975
symbol: SHN87733.1
gene_biotype: protein_coding
description:
  Cell division protein ZapA; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.


ensembl_gene_id: SAMN02745215_04984
symbol: mutS2
gene_biotype: protein_coding
description:
  DNA mismatch repair protein, MutS family; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.


ensembl_gene_id: SAMN02745215_04990
symbol: tyrS
gene_biotype: protein_coding
description:
  tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily.


ensembl_gene_id: SAMN02745215_05081
symbol: cbiN
gene_biotype: protein_coding
description:
  Cobalt/nickel transport protein; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import; Belongs to the CbiN family.


ensembl_gene_id: SAMN02745215_05082
symbol: cbiM
gene_biotype: protein_coding
description:
  Cobalt/nickel transport system permease protein; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import.


ensembl_gene_id: SAMN02745215_05109
symbol: SHN88044.1
gene_biotype: protein_coding
description:
  XTP/dITP diphosphohydrolase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.


ensembl_gene_id: SAMN02745215_05110
symbol: rph
gene_biotype: protein_coding
description:
  RNAse PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation.


ensembl_gene_id: SAMN02745215_05123
symbol: glmE
gene_biotype: protein_coding
description:
  Glutamate mutase subunit E; Catalyzes the carbon skeleton rearrangement of L-glutamate to L-threo-3-methylaspartate ((2S,3S)-3-methylaspartate).


ensembl_gene_id: SAMN02745215_05125
symbol: glmS-2
gene_biotype: protein_coding
description:
  Glutamate mutase subunit S; Catalyzes the carbon skeleton rearrangement of L-glutamate to L-threo-3-methylaspartate ((2S,3S)-3-methylaspartate).


ensembl_gene_id: SAMN02745215_05143
symbol: SHN88089.1
gene_biotype: protein_coding
description:
  Cell fate regulator YlbF, YheA/YmcA/DUF963 family (controls sporulation, competence, biofilm development); Belongs to the UPF0342 family.


ensembl_gene_id: SAMN02745215_05177
symbol: SHN88159.1
gene_biotype: protein_coding
description:
  Molybdopterin biosynthesis enzyme; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.


ensembl_gene_id: SAMN02745215_05181
symbol: SHN88167.1
gene_biotype: protein_coding
description:
  Molybdopterin molybdotransferase; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.


ensembl_gene_id: SAMN02745215_05186
symbol: tyrS-2
gene_biotype: protein_coding
description:
  tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 2 subfamily.


ensembl_gene_id: SAMN02745215_05196
symbol: lgt
gene_biotype: protein_coding
description:
  Phosphatidylglycerol:prolipoprotein diacylglycerol transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.


ensembl_gene_id: SAMN02745215_05226
symbol: SHN88232.1
gene_biotype: protein_coding
description:
  23S rRNA m(5)U-1939 methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.


ensembl_gene_id: SAMN02745215_05256
symbol: SHN88293.1
gene_biotype: protein_coding
description:
  Ribonucleoside-diphosphate reductase class II; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.


ensembl_gene_id: SAMN02745215_05257
symbol: nrdR
gene_biotype: protein_coding
description:
  Transcriptional repressor NrdR; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family.


ensembl_gene_id: SAMN02745215_05302
symbol: uppP
gene_biotype: protein_coding
description:
  Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.


ensembl_gene_id: SAMN02745215_05315
symbol: SHN88397.1
gene_biotype: protein_coding
description:
  Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.


ensembl_gene_id: SAMN02745215_05358
symbol: dltA
gene_biotype: protein_coding
description:
  D-alanine--poly(phosphoribitol) ligase subunit 1; Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D- alanyl carrier protein (Dcp) DltC. In an ATP-dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall. Belongs to  [...]


ensembl_gene_id: SAMN02745215_05359
symbol: SHN88478.1
gene_biotype: protein_coding
description:
  Membrane protein involved in D-alanine export; Could be involved in the transport of activated D-alanine through the membrane.


ensembl_gene_id: SAMN02745215_05360
symbol: dltC
gene_biotype: protein_coding
description:
  D-alanine--poly(phosphoribitol) ligase subunit 2; Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC- carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall.


ensembl_gene_id: SAMN02745215_05364
symbol: SHN88488.1
gene_biotype: protein_coding
description:
  LysR family transcriptional regulator, cys regulon transcriptional activator; Belongs to the LysR transcriptional regulatory family.


# pathwayInfo

id: CL:10000
description: Mostly uncharacterized, incl. Methyltransferase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:10000_Mostly_uncharacterized,_incl._Methyltransferase_complex


id: CL:10020
description: Mostly uncharacterized, incl. Exodeoxyribonuclease VII complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:10020_Mostly_uncharacterized,_incl._Exodeoxyribonuclease_VII_complex


id: CL:10038
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:10038_Mostly_uncharacterized,_incl._Glyoxalase/Bleomycin_resistance_protein/Dihydroxybiphenyl_dioxygenase,_and_Dihydrofolate_reductase

description:
  Mostly uncharacterized, incl. Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase, and Dihydrofolate reductase


id: CL:10039
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:10039_Mixed,_incl._Glyoxalase/Bleomycin_resistance_protein/Dihydroxybiphenyl_dioxygenase,_and_SP1917_domain_superfamily

description:
  Mixed, incl. Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase, and SP1917 domain superfamily


id: CL:10040
description: Mixed, incl. PhnB-like, and Protein of unknown function DUF1697
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:10040_Mixed,_incl._PhnB-like,_and_Protein_of_unknown_function_DUF1697


id: CL:10041
description: Mixed, incl. PhnB-like, and Protein of unknown function DUF1697
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:10041_Mixed,_incl._PhnB-like,_and_Protein_of_unknown_function_DUF1697


id: CL:10043
description: PhnB-like, and Protein of unknown function DUF1697
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:10043_PhnB-like,_and_Protein_of_unknown_function_DUF1697


id: CL:10045
description: PhnB-like, and Protein of unknown function DUF1697
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:10045_PhnB-like,_and_Protein_of_unknown_function_DUF1697


id: CL:1006
description: Mixed, incl. PhoH-like protein, and K Homology domain, type 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1006_Mixed,_incl._PhoH-like_protein,_and_K_Homology_domain,_type_2


id: CL:10075
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:10075_Mixed,_incl._Polymerase,_nucleotidyl_transferase_domain,_and_Glyoxalase/fosfomycin_resistance/dioxygenase_domain

description:
  Mixed, incl. Polymerase, nucleotidyl transferase domain, and Glyoxalase/fosfomycin resistance/dioxygenase domain


id: CL:10097
description: Mixed, incl. Peptidase M29, and Protein lipoylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:10097_Mixed,_incl._Peptidase_M29,_and_Protein_lipoylation


id: CL:10098
description: Mixed, incl. Protein lipoylation, and SP1917 domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:10098_Mixed,_incl._Protein_lipoylation,_and_SP1917_domain_superfamily


id: CL:10107
description: Mixed, incl. Peptidase M29, and NfeD-like C-terminal, partner-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:10107_Mixed,_incl._Peptidase_M29,_and_NfeD-like_C-terminal,_partner-binding


id: CL:10116
description: Mostly uncharacterized, incl. Dihydrofolate reductase, and mRNA interferase PemK-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:10116_Mostly_uncharacterized,_incl._Dihydrofolate_reductase,_and_mRNA_interferase_PemK-like


id: CL:10117
description: Mixed, incl. Dihydrofolate reductase, and mRNA interferase PemK-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:10117_Mixed,_incl._Dihydrofolate_reductase,_and_mRNA_interferase_PemK-like


id: CL:10137
description: Mostly uncharacterized, incl. EcsC protein, and Inorganic diphosphatase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:10137_Mostly_uncharacterized,_incl._EcsC_protein,_and_Inorganic_diphosphatase_activity


id: CL:10138
description: Mixed, incl. Inorganic diphosphatase activity, and Protein of unknown function DUF554
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:10138_Mixed,_incl._Inorganic_diphosphatase_activity,_and_Protein_of_unknown_function_DUF554


id: CL:10158
description: Mixed, incl. Transposition, and Primosome complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:10158_Mixed,_incl._Transposition,_and_Primosome_complex


id: CL:10160
description: Mixed, incl. Transposition, DNA-mediated, and HTH-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:10160_Mixed,_incl._Transposition,_DNA-mediated,_and_HTH-like_domain


id: CL:10161
description: Mixed, incl. HTH-like domain, and Helix-turn-helix domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:10161_Mixed,_incl._HTH-like_domain,_and_Helix-turn-helix_domain


id: CL:10164
description: Mixed, incl. HTH-like domain, and N-6 DNA Methylase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:10164_Mixed,_incl._HTH-like_domain,_and_N-6_DNA_Methylase


id: CL:10177
description: Mixed, incl. Helix-turn-helix domain, and HTH-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:10177_Mixed,_incl._Helix-turn-helix_domain,_and_HTH-like_domain


id: CL:1018
description: Mixed, incl. Isoprenoid biosynthetic process, and Cellular modified amino acid biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1018_Mixed,_incl._Isoprenoid_biosynthetic_process,_and_Cellular_modified_amino_acid_biosynthetic_process


id: CL:1019
description: Mixed, incl. Isoprenoid biosynthetic process, and Phospholipid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1019_Mixed,_incl._Isoprenoid_biosynthetic_process,_and_Phospholipid_metabolism


id: CL:10191
description: Mixed, incl. DDE transposase sub-family, and DDE transposase sub-family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:10191_Mixed,_incl._DDE_transposase_sub-family,_and_DDE_transposase_sub-family


id: CL:1020
description: Mixed, incl. Isoprenoid biosynthetic process, and DNA catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1020_Mixed,_incl._Isoprenoid_biosynthetic_process,_and_DNA_catabolic_process


id: CL:1021
description: Isoprenoid biosynthetic process, and De novo CTP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1021_Isoprenoid_biosynthetic_process,_and_De_novo_CTP_biosynthetic_process


id: CL:10212
description: Mixed, incl. IstB-like ATP-binding protein, and DDE transposase retroviral integrase sub-family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:10212_Mixed,_incl._IstB-like_ATP-binding_protein,_and_DDE_transposase_retroviral_integrase_sub-family


id: CL:10216
description: IstB-like ATP-binding protein, and DDE transposase retroviral integrase sub-family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:10216_IstB-like_ATP-binding_protein,_and_DDE_transposase_retroviral_integrase_sub-family


id: CL:1023
description: Isoprene biosynthesis, and De novo CTP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1023_Isoprene_biosynthesis,_and_De_novo_CTP_biosynthetic_process


id: CL:10237
description: Mostly uncharacterized, incl. CGGC domain, and IrrE N-terminal-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:10237_Mostly_uncharacterized,_incl._CGGC_domain,_and_IrrE_N-terminal-like_domain


id: CL:10239
description: Mixed, incl. CGGC domain, and Glutamate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:10239_Mixed,_incl._CGGC_domain,_and_Glutamate_biosynthetic_process


id: CL:10256
description: Mixed, incl. Glycosyl hydrolases family 25
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:10256_Mixed,_incl._Glycosyl_hydrolases_family_25


id: CL:10268
description: Mixed, incl. Uracil DNA N-glycosylase activity, and RuvA domain 2-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:10268_Mixed,_incl._Uracil_DNA_N-glycosylase_activity,_and_RuvA_domain_2-like


id: CL:10283
description: ABC transporter, substrate-binding protein, and ABC transporter, permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:10283_ABC_transporter,_substrate-binding_protein,_and_ABC_transporter,_permease


id: CL:10301
description: Mostly uncharacterized, incl. YopX protein, and N-6 DNA Methylase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:10301_Mostly_uncharacterized,_incl._YopX_protein,_and_N-6_DNA_Methylase


id: CL:10302
description: Mostly uncharacterized, incl. N-6 DNA Methylase, and YopX protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:10302_Mostly_uncharacterized,_incl._N-6_DNA_Methylase,_and_YopX_protein


id: CL:10304
description: Mixed, incl. YopX protein, and HAD superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:10304_Mixed,_incl._YopX_protein,_and_HAD_superfamily


id: CL:10322
description: Mixed, incl. N-6 DNA Methylase, and Response to virus
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:10322_Mixed,_incl._N-6_DNA_Methylase,_and_Response_to_virus


id: CL:10332
description: Mixed, incl. Domain of unknown function DUF551
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:10332_Mixed,_incl._Domain_of_unknown_function_DUF551


id: CL:10353
description: Mixed, incl. Death on curing protein, and Lipoprotein
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:10353_Mixed,_incl._Death_on_curing_protein,_and_Lipoprotein


id: CL:1038
description: Mixed, incl. De novo CTP biosynthetic process, and Cytidylyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1038_Mixed,_incl._De_novo_CTP_biosynthetic_process,_and_Cytidylyltransferase_activity


id: CL:1050
description: Polyprenyl synthetase, and PFTB repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1050_Polyprenyl_synthetase,_and_PFTB_repeat


id: CL:1065
description: Mixed, incl. DNA catabolic process, and Host cell
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1065_Mixed,_incl._DNA_catabolic_process,_and_Host_cell


id: CL:1068
description: DNA catabolic process, and Host cell
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1068_DNA_catabolic_process,_and_Host_cell


id: CL:1088
description: Mixed, incl. Phospholipid metabolism, and Pseudouridine synthase TruA/RsuA/RluB/E/F, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1088_Mixed,_incl._Phospholipid_metabolism,_and_Pseudouridine_synthase_TruA/RsuA/RluB/E/F,_N-terminal


id: CL:1089
description: Mixed, incl. Pseudouridine synthase TruA/RsuA/RluB/E/F, N-terminal, and PDZ domain 6
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1089_Mixed,_incl._Pseudouridine_synthase_TruA/RsuA/RluB/E/F,_N-terminal,_and_PDZ_domain_6


id: CL:1098
description: Glycerol-3-phosphate acyltransferase, and glycerol-3-phosphate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1098_Glycerol-3-phosphate_acyltransferase,_and_glycerol-3-phosphate_metabolic_process


id: CL:1111
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1111_Mixed,_incl._Cellular_modified_amino_acid_biosynthetic_process,_and_Pyridine_nucleotide_biosynthetic_process

description:
  Mixed, incl. Cellular modified amino acid biosynthetic process, and Pyridine nucleotide biosynthetic process


id: CL:1112
description: Cellular modified amino acid biosynthetic process, and Riboflavin metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1112_Cellular_modified_amino_acid_biosynthetic_process,_and_Riboflavin_metabolic_process


id: CL:1113
description: Riboflavin metabolic process, and Folic acid biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1113_Riboflavin_metabolic_process,_and_Folic_acid_biosynthetic_process


id: CL:1115
description: Folic acid biosynthetic process, and GTP cyclohydrolase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1115_Folic_acid_biosynthetic_process,_and_GTP_cyclohydrolase_activity


id: CL:112
description: Translation, and Ribosome biogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:112_Translation,_and_Ribosome_biogenesis


id: CL:1126
description: Riboflavin biosynthesis, and ATP synthase subunit alpha, N-terminal domain-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1126_Riboflavin_biosynthesis,_and_ATP_synthase_subunit_alpha,_N-terminal_domain-like_superfamily


id: CL:1137
description: Coenzyme A metabolic process, and Pantothenate biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1137_Coenzyme_A_metabolic_process,_and_Pantothenate_biosynthesis


id: CL:114
description: Translation, and Ribonucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:114_Translation,_and_Ribonucleoside_triphosphate_biosynthetic_process


id: CL:115
description: Translation, and Ribonucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:115_Translation,_and_Ribonucleoside_triphosphate_biosynthetic_process


id: CL:1155
description: Pyridine nucleotide biosynthetic process, and Nucleoside monophosphate catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1155_Pyridine_nucleotide_biosynthetic_process,_and_Nucleoside_monophosphate_catabolic_process


id: CL:1157
description: Pyridine nucleotide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1157_Pyridine_nucleotide_biosynthetic_process


id: CL:1179
description: Mixed, incl. tRNA threonylcarbamoyladenosine modification, and TPR repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1179_Mixed,_incl._tRNA_threonylcarbamoyladenosine_modification,_and_TPR_repeat


id: CL:1182
description: tRNA threonylcarbamoyladenosine modification, and N-acetyltransferase RimI/Ard1
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1182_tRNA_threonylcarbamoyladenosine_modification,_and_N-acetyltransferase_RimI/Ard1


id: CL:119
description: Ribosome, and Regulation of translation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:119_Ribosome,_and_Regulation_of_translation


id: CL:1194
description: TPR repeat, and YqgF/RNase H-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1194_TPR_repeat,_and_YqgF/RNase_H-like_domain


id: CL:1207
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1207_Mixed,_incl._Alpha-amino_acid_metabolic_process,_and_Ribonucleoside_monophosphate_biosynthetic_process

description:
  Mixed, incl. Alpha-amino acid metabolic process, and Ribonucleoside monophosphate biosynthetic process


id: CL:1208
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1208_Mixed,_incl._Alanine,_aspartate_and_glutamate_metabolism,_and_Ribonucleoside_monophosphate_biosynthetic_process

description:
  Mixed, incl. Alanine, aspartate and glutamate metabolism, and Ribonucleoside monophosphate biosynthetic process


id: CL:1209
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1209_Mixed,_incl._Alanine,_aspartate_and_glutamate_metabolism,_and_Ribonucleoside_monophosphate_biosynthetic_process

description:
  Mixed, incl. Alanine, aspartate and glutamate metabolism, and Ribonucleoside monophosphate biosynthetic process


id: CL:121
description: Structural constituent of ribosome, and Regulation of translation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:121_Structural_constituent_of_ribosome,_and_Regulation_of_translation


id: CL:1210
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1210_Mixed,_incl._Ribonucleoside_monophosphate_biosynthetic_process,_and_Alanine,_aspartate_and_glutamate_metabolism

description:
  Mixed, incl. Ribonucleoside monophosphate biosynthetic process, and Alanine, aspartate and glutamate metabolism


id: CL:1211
description: Ribonucleoside monophosphate biosynthetic process, and CBS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1211_Ribonucleoside_monophosphate_biosynthetic_process,_and_CBS_domain


id: CL:1212
description: Ribonucleoside monophosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1212_Ribonucleoside_monophosphate_biosynthetic_process


id: CL:1213
description: De novo UMP biosynthetic process, and Permease family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1213_De_novo_UMP_biosynthetic_process,_and_Permease_family


id: CL:122
description: Structural constituent of ribosome, and Ribonucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:122_Structural_constituent_of_ribosome,_and_Ribonucleoside_triphosphate_biosynthetic_process


id: CL:1229
description: Pyrimidine nucleobase biosynthetic process, and Permease family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1229_Pyrimidine_nucleobase_biosynthetic_process,_and_Permease_family


id: CL:123
description: Structural constituent of ribosome, and Ribonucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:123_Structural_constituent_of_ribosome,_and_Ribonucleoside_triphosphate_biosynthetic_process


id: CL:1242
description: De novo IMP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1242_De_novo_IMP_biosynthetic_process


id: CL:1244
description: De novo IMP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1244_De_novo_IMP_biosynthetic_process


id: CL:125
description: Structural constituent of ribosome, and Translational elongation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:125_Structural_constituent_of_ribosome,_and_Translational_elongation


id: CL:1268
description: Mixed, incl. Phosphoribosyl transferase domain, and GMP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1268_Mixed,_incl._Phosphoribosyl_transferase_domain,_and_GMP_biosynthetic_process


id: CL:1271
description: GMP biosynthetic process, and AMP binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1271_GMP_biosynthetic_process,_and_AMP_binding


id: CL:128
description: Structural constituent of ribosome, and Translational elongation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:128_Structural_constituent_of_ribosome,_and_Translational_elongation


id: CL:1290
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1290_Alanine,_aspartate_and_glutamate_metabolism,_and_glutaminyl-tRNA_synthase_(glutamine-hydrolyzing)_activity

description:
  Alanine, aspartate and glutamate metabolism, and glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity


id: CL:1291
description: Glutamate biosynthetic process, and glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1291_Glutamate_biosynthetic_process,_and_glutaminyl-tRNA_synthase_(glutamine-hydrolyzing)_activity


id: CL:1293
description: Glutamate biosynthetic process, and Ammonia ligase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1293_Glutamate_biosynthetic_process,_and_Ammonia_ligase_activity


id: CL:1294
description: Glutamate biosynthetic process, and Iron hydrogenase, subset
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1294_Glutamate_biosynthetic_process,_and_Iron_hydrogenase,_subset


id: CL:1305
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1305_Ammonia_ligase_activity,_and_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_NAD_or_NADP_as_acceptor

description:
  Ammonia ligase activity, and Oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor


id: CL:1317
description: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1317_glutaminyl-tRNA_synthase_(glutamine-hydrolyzing)_activity


id: CL:133
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:133_Structural_constituent_of_ribosome


id: CL:1331
description: Mixed, incl. Asparagine metabolic process, and Asp/Glu racemase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1331_Mixed,_incl._Asparagine_metabolic_process,_and_Asp/Glu_racemase


id: CL:1349
description: Diaminopimelate metabolic process, and Arginine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1349_Diaminopimelate_metabolic_process,_and_Arginine_metabolic_process


id: CL:135
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:135_Structural_constituent_of_ribosome


id: CL:1351
description: Lysine biosynthesis, and ACT domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1351_Lysine_biosynthesis,_and_ACT_domain


id: CL:1365
description: Lysine biosynthesis, and ArgE/DapE/ACY1/CPG2/YscS, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1365_Lysine_biosynthesis,_and_ArgE/DapE/ACY1/CPG2/YscS,_conserved_site


id: CL:1377
description: Arginine metabolic process, and Proline biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1377_Arginine_metabolic_process,_and_Proline_biosynthesis


id: CL:139
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:139_Structural_constituent_of_ribosome


id: CL:140
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:140_Structural_constituent_of_ribosome


id: CL:1400
description: Mixed, incl. Allantoin metabolic process, and Amidohydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1400_Mixed,_incl._Allantoin_metabolic_process,_and_Amidohydrolase


id: CL:1403
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1403_Allantoinase,_and_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_linear_amidines

description:
  Allantoinase, and Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines


id: CL:142
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:142_Structural_constituent_of_ribosome


id: CL:1421
description: Mixed, incl. Glycine catabolic process, and Tetrahydrofolate interconversion
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1421_Mixed,_incl._Glycine_catabolic_process,_and_Tetrahydrofolate_interconversion


id: CL:1423
description: Glycine catabolic process, and Tetrahydrofolate interconversion
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1423_Glycine_catabolic_process,_and_Tetrahydrofolate_interconversion


id: CL:1424
description: Glycine catabolic process, and Beta-eliminating lyase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1424_Glycine_catabolic_process,_and_Beta-eliminating_lyase


id: CL:1429
description: Glycine cleavage complex, and Glycine cleavage T-protein/YgfZ, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1429_Glycine_cleavage_complex,_and_Glycine_cleavage_T-protein/YgfZ,_C-terminal


id: CL:144
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:144_Structural_constituent_of_ribosome


id: CL:1443
description: Tetrahydrofolate interconversion, and Cyclodeaminase/cyclohydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1443_Tetrahydrofolate_interconversion,_and_Cyclodeaminase/cyclohydrolase


id: CL:145
description: Large ribosomal subunit, and Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:145_Large_ribosomal_subunit,_and_Structural_constituent_of_ribosome


id: CL:1468
description: Biosynthesis of amino acids, and Sulphoacetaldehyde acetyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1468_Biosynthesis_of_amino_acids,_and_Sulphoacetaldehyde_acetyltransferase


id: CL:147
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:147_Structural_constituent_of_ribosome


id: CL:1470
description: Branched-chain amino acid metabolic process, and Cysteine and methionine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1470_Branched-chain_amino_acid_metabolic_process,_and_Cysteine_and_methionine_metabolism


id: CL:1471
description: Cysteine and methionine metabolism, and Pyridoxal-phosphate dependent enzyme
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1471_Cysteine_and_methionine_metabolism,_and_Pyridoxal-phosphate_dependent_enzyme


id: CL:1473
description: Mixed, incl. Cysteine metabolic process, and Threonine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1473_Mixed,_incl._Cysteine_metabolic_process,_and_Threonine_biosynthesis


id: CL:1475
description: Cysteine synthase activity, and Transsulfuration
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1475_Cysteine_synthase_activity,_and_Transsulfuration


id: CL:1489
description: Threonine biosynthesis, and Homoserine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1489_Threonine_biosynthesis,_and_Homoserine_metabolic_process


id: CL:1505
description: L-serine biosynthetic process, and L-serine ammonia-lyase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1505_L-serine_biosynthetic_process,_and_L-serine_ammonia-lyase_activity


id: CL:1521
description: Valine, leucine and isoleucine biosynthesis, and Sulphoacetaldehyde acetyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1521_Valine,_leucine_and_isoleucine_biosynthesis,_and_Sulphoacetaldehyde_acetyltransferase


id: CL:1524
description: Valine, leucine and isoleucine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1524_Valine,_leucine_and_isoleucine_biosynthesis


id: CL:1525
description: Valine metabolic process, and L-threonine ammonia-lyase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1525_Valine_metabolic_process,_and_L-threonine_ammonia-lyase_activity


id: CL:1544
description: Leucine biosynthesis, and Dehydratase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1544_Leucine_biosynthesis,_and_Dehydratase_family


id: CL:1568
description: Phenylalanine, tyrosine and tryptophan biosynthesis, and Histidine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1568_Phenylalanine,_tyrosine_and_tryptophan_biosynthesis,_and_Histidine_biosynthesis


id: CL:1569
description: Aromatic amino acid family biosynthetic process, and Anthranilate synthase component I-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1569_Aromatic_amino_acid_family_biosynthetic_process,_and_Anthranilate_synthase_component_I-like


id: CL:1571
description: Aromatic amino acid family biosynthetic process, and Anthranilate synthase component I-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1571_Aromatic_amino_acid_family_biosynthetic_process,_and_Anthranilate_synthase_component_I-like


id: CL:1572
description: Aromatic amino acid family biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1572_Aromatic_amino_acid_family_biosynthetic_process


id: CL:1576
description: Chorismate biosynthetic process, and NeuB family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1576_Chorismate_biosynthetic_process,_and_NeuB_family


id: CL:1595
description: Tryptophan biosynthesis, and Anthranilate synthase component I-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1595_Tryptophan_biosynthesis,_and_Anthranilate_synthase_component_I-like


id: CL:1647
description: Mixed, incl. Helix_turn_helix ASNC type, and Lactone metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1647_Mixed,_incl._Helix_turn_helix_ASNC_type,_and_Lactone_metabolic_process


id: CL:1656
description: Mixed, incl. Polyamine metabolic process, and Ureohydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1656_Mixed,_incl._Polyamine_metabolic_process,_and_Ureohydrolase


id: CL:1657
description: Polyamine metabolic process, and Ureohydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1657_Polyamine_metabolic_process,_and_Ureohydrolase


id: CL:1660
description: Orn/Lys/Arg decarboxylase, C-terminal, and Polyamine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1660_Orn/Lys/Arg_decarboxylase,_C-terminal,_and_Polyamine_biosynthesis


id: CL:1680
description: Mixed, incl. Flavocytochrome c, and Amino acid salvage
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1680_Mixed,_incl._Flavocytochrome_c,_and_Amino_acid_salvage


id: CL:1693
description: Mixed, incl. Regulation of cell shape, and Cell division
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1693_Mixed,_incl._Regulation_of_cell_shape,_and_Cell_division


id: CL:1694
description: Mixed, incl. Regulation of cell shape, and Cell division
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1694_Mixed,_incl._Regulation_of_cell_shape,_and_Cell_division


id: CL:1695
description: Mixed, incl. Regulation of cell shape, and Cell division
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1695_Mixed,_incl._Regulation_of_cell_shape,_and_Cell_division


id: CL:1696
description: Mixed, incl. Regulation of cell shape, and Cell division
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1696_Mixed,_incl._Regulation_of_cell_shape,_and_Cell_division


id: CL:1697
description: Mixed, incl. Regulation of cell shape, and Cell division
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1697_Mixed,_incl._Regulation_of_cell_shape,_and_Cell_division


id: CL:1698
description: Mixed, incl. Regulation of cell shape, and Cell division site
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1698_Mixed,_incl._Regulation_of_cell_shape,_and_Cell_division_site


id: CL:1699
description: Cell cycle, and Cell wall macromolecule biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1699_Cell_cycle,_and_Cell_wall_macromolecule_biosynthetic_process


id: CL:1700
description: Cell cycle, and Alanine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1700_Cell_cycle,_and_Alanine_metabolic_process


id: CL:1701
description: Cell cycle, and Alanine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1701_Cell_cycle,_and_Alanine_metabolic_process


id: CL:1703
description: Cell shape, and Alanine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1703_Cell_shape,_and_Alanine_metabolic_process


id: CL:1708
description: MurE/MurF, N-terminal, and Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1708_MurE/MurF,_N-terminal,_and_Phospho-N-acetylmuramoyl-pentapeptide_transferase,_conserved_site


id: CL:1750
description: Transglycosylase, and Lytic endotransglycosylase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1750_Transglycosylase,_and_Lytic_endotransglycosylase_activity


id: CL:1760
description: Mixed, incl. RimK-like ATP-grasp domain, and FemABX peptidyl transferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1760_Mixed,_incl._RimK-like_ATP-grasp_domain,_and_FemABX_peptidyl_transferase


id: CL:1775
description: Mixed, incl. Cell morphogenesis, and Regulation of cell cycle
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1775_Mixed,_incl._Cell_morphogenesis,_and_Regulation_of_cell_cycle


id: CL:1777
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1777_Mixed,_incl._Cell_shape_determining_protein_MreB,_and_Penicillin-binding_Protein_dimerisation_domain

description:
  Mixed, incl. Cell shape determining protein MreB, and Penicillin-binding Protein dimerisation domain


id: CL:180
description: Small ribosomal subunit, and rRNA-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:180_Small_ribosomal_subunit,_and_rRNA-binding


id: CL:1802
description: Mixed, incl. RsgA GTPase domain, and Forkhead associated domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1802_Mixed,_incl._RsgA_GTPase_domain,_and_Forkhead_associated_domain


id: CL:1804
description: Mixed, incl. Forkhead associated domain, and Protein kinase, ATP binding site
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1804_Mixed,_incl._Forkhead_associated_domain,_and_Protein_kinase,_ATP_binding_site


id: CL:181
description: Mixed, incl. Small ribosomal subunit, and K Homology domain, type 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:181_Mixed,_incl._Small_ribosomal_subunit,_and_K_Homology_domain,_type_2


id: CL:1830
description: Mixed, incl. Beta-lactamase/transpeptidase-like, and Ami_3
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1830_Mixed,_incl._Beta-lactamase/transpeptidase-like,_and_Ami_3


id: CL:1831
description: Mixed, incl. Ami_3, and NlpC/P60 family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1831_Mixed,_incl._Ami_3,_and_NlpC/P60_family


id: CL:1833
description: Mixed, incl. Ami_3, and NlpC/P60 family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1833_Mixed,_incl._Ami_3,_and_NlpC/P60_family


id: CL:1837
description: Mixed, incl. Ami_3, and Cell Wall Hydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1837_Mixed,_incl._Ami_3,_and_Cell_Wall_Hydrolase


id: CL:1853
description: Ami_3, and Bacterial Ig-like domain 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1853_Ami_3,_and_Bacterial_Ig-like_domain_2


id: CL:1870
description: Carboxypeptidase, and Nucleoside transporter/FeoB GTPase, Gate domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1870_Carboxypeptidase,_and_Nucleoside_transporter/FeoB_GTPase,_Gate_domain


id: CL:1886
description: Nucleoside transporter/FeoB GTPase, Gate domain, and Glycosyltransferase RgtA/B/C/D-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1886_Nucleoside_transporter/FeoB_GTPase,_Gate_domain,_and_Glycosyltransferase_RgtA/B/C/D-like


id: CL:1895
description: Mixed, incl. Peptidase M23, and Tail specific protease
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1895_Mixed,_incl._Peptidase_M23,_and_Tail_specific_protease


id: CL:1897
description: Mixed, incl. Tail specific protease, and ABC transporter, lipoprotein release, LolD-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1897_Mixed,_incl._Tail_specific_protease,_and_ABC_transporter,_lipoprotein_release,_LolD-like


id: CL:1921
description: VanW like protein, and D-alanine--D-alanine ligase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1921_VanW_like_protein,_and_D-alanine--D-alanine_ligase


id: CL:1935
description: Mixed, incl. S4 RNA-binding domain, and Regulation of pH
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1935_Mixed,_incl._S4_RNA-binding_domain,_and_Regulation_of_pH


id: CL:1937
description: Mixed, incl. Regulation of pH, and Alanine racemase, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1937_Mixed,_incl._Regulation_of_pH,_and_Alanine_racemase,_N-terminal


id: CL:194
description: Small ribosomal subunit, and Ribosomal protein S13-like, H2TH
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:194_Small_ribosomal_subunit,_and_Ribosomal_protein_S13-like,_H2TH


id: CL:1947
description: Mixed, incl. Aspartyl protease, and Zinc finger, DksA/TraR C4-type
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1947_Mixed,_incl._Aspartyl_protease,_and_Zinc_finger,_DksA/TraR_C4-type


id: CL:1963
description: Mixed, incl. Polysaccharide metabolic process, and Amino sugar and nucleotide sugar metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1963_Mixed,_incl._Polysaccharide_metabolic_process,_and_Amino_sugar_and_nucleotide_sugar_metabolism


id: CL:1966
description: Polysaccharide biosynthetic process, and Amino sugar and nucleotide sugar metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1966_Polysaccharide_biosynthetic_process,_and_Amino_sugar_and_nucleotide_sugar_metabolism


id: CL:1967
description: Mixed, incl. Starch and sucrose metabolism, and Nucleotide-diphospho-sugar transferases
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1967_Mixed,_incl._Starch_and_sucrose_metabolism,_and_Nucleotide-diphospho-sugar_transferases


id: CL:1969
description: Mixed, incl. Starch and sucrose metabolism, and Amino sugar metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1969_Mixed,_incl._Starch_and_sucrose_metabolism,_and_Amino_sugar_metabolic_process


id: CL:1971
description: Mixed, incl. Nucleotidyl transferase domain, and Alpha-D-phosphohexomutase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1971_Mixed,_incl._Nucleotidyl_transferase_domain,_and_Alpha-D-phosphohexomutase_superfamily


id: CL:1973
description: Nucleotidyl transferase domain, and UDP binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:1973_Nucleotidyl_transferase_domain,_and_UDP_binding_domain


id: CL:2000
description: Glycogen biosynthesis, and Glycosyl hydrolase, all-beta
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2000_Glycogen_biosynthesis,_and_Glycosyl_hydrolase,_all-beta


id: CL:2020
description: Mixed, incl. Glucosyltransferase activity, and Mannose-6-phosphate isomerase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2020_Mixed,_incl._Glucosyltransferase_activity,_and_Mannose-6-phosphate_isomerase


id: CL:2032
description: Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and Glycosyl transferases group 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2032_Mixed,_incl._O-Antigen_nucleotide_sugar_biosynthesis,_and_Glycosyl_transferases_group_1


id: CL:2033
description: O-Antigen nucleotide sugar biosynthesis, and Glycosyl transferase family 4
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2033_O-Antigen_nucleotide_sugar_biosynthesis,_and_Glycosyl_transferase_family_4


id: CL:2035
description: Mixed, incl. DegT/DnrJ/EryC1/StrS aminotransferase, and UDP binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2035_Mixed,_incl._DegT/DnrJ/EryC1/StrS_aminotransferase,_and_UDP_binding_domain


id: CL:2047
description: Mixed, incl. Glycosyl transferase family 4, and TrkA-N domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2047_Mixed,_incl._Glycosyl_transferase_family_4,_and_TrkA-N_domain


id: CL:2059
description: Polysaccharide biosynthesis protein, and Glycosyl transferases group 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2059_Polysaccharide_biosynthesis_protein,_and_Glycosyl_transferases_group_1


id: CL:2076
description: Mixed, incl. Phosphodiester glycosidase, and Protein of unknown function DUF554
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2076_Mixed,_incl._Phosphodiester_glycosidase,_and_Protein_of_unknown_function_DUF554


id: CL:2078
description: Phosphodiester glycosidase, and Lon protease
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2078_Phosphodiester_glycosidase,_and_Lon_protease


id: CL:209
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:209_Structural_constituent_of_ribosome


id: CL:2096
description: Mixed, incl. 3D domain, and Protein of unknown function DUF881
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2096_Mixed,_incl._3D_domain,_and_Protein_of_unknown_function_DUF881


id: CL:2097
description: Mixed, incl. 3D domain, and Protein of unknown function DUF881
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2097_Mixed,_incl._3D_domain,_and_Protein_of_unknown_function_DUF881


id: CL:2099
description: Ribosomal RNA adenine dimethylases, and Ribonuclease M5 activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2099_Ribosomal_RNA_adenine_dimethylases,_and_Ribonuclease_M5_activity


id: CL:211
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:211_Mixed,_incl._Large_ribosomal_subunit_rRNA_binding,_and_Translation_protein_SH3-like_domain_superfamily

description:
  Mixed, incl. Large ribosomal subunit rRNA binding, and Translation protein SH3-like domain superfamily


id: CL:2121
description: Anaerobic sulphatase maturase, radical SAM, and Response to nitrosative stress
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2121_Anaerobic_sulphatase_maturase,_radical_SAM,_and_Response_to_nitrosative_stress


id: CL:2133
description: Mixed, incl. Sister chromatid segregation, and Chromosome partition
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2133_Mixed,_incl._Sister_chromatid_segregation,_and_Chromosome_partition


id: CL:2135
description: Mixed, incl. Sister chromatid segregation, and Chromosome partition
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2135_Mixed,_incl._Sister_chromatid_segregation,_and_Chromosome_partition


id: CL:2137
description: Mixed, incl. Sister chromatid segregation, and Chromosome partition
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2137_Mixed,_incl._Sister_chromatid_segregation,_and_Chromosome_partition


id: CL:2141
description: Mixed, incl. Chromosome partition, and Tryptophan-tRNA ligase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2141_Mixed,_incl._Chromosome_partition,_and_Tryptophan-tRNA_ligase


id: CL:2168
description: Mixed, incl. RecF/RecN/SMC, N-terminal, and Domain of unknown function DUF4367
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2168_Mixed,_incl._RecF/RecN/SMC,_N-terminal,_and_Domain_of_unknown_function_DUF4367


id: CL:2185
description: Mixed, incl. Wadjet protein JetD, C-terminal, and OLD protein-like, TOPRIM domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2185_Mixed,_incl._Wadjet_protein_JetD,_C-terminal,_and_OLD_protein-like,_TOPRIM_domain


id: CL:2196
description: Mixed, incl. Glycerophospholipid metabolism, and Aminopeptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2196_Mixed,_incl._Glycerophospholipid_metabolism,_and_Aminopeptidase_activity


id: CL:2197
description: Mixed, incl. Glycerolipid biosynthetic process, and Peptidase M28
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2197_Mixed,_incl._Glycerolipid_biosynthetic_process,_and_Peptidase_M28


id: CL:2198
description: Mixed, incl. Glycerolipid biosynthetic process, and Peptidase M28
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2198_Mixed,_incl._Glycerolipid_biosynthetic_process,_and_Peptidase_M28


id: CL:2200
description: Phospholipase D-like domain, and Peptidase M28
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2200_Phospholipase_D-like_domain,_and_Peptidase_M28


id: CL:2217
description: Mixed, incl. CDP-alcohol phosphatidyltransferase, and Zymogen
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2217_Mixed,_incl._CDP-alcohol_phosphatidyltransferase,_and_Zymogen


id: CL:2231
description: Mixed, incl. TPM domain, and Antibiotic resistance
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2231_Mixed,_incl._TPM_domain,_and_Antibiotic_resistance


id: CL:2244
description: Mixed, incl. Peptidase M29, and Diacylglycerol/lipid kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2244_Mixed,_incl._Peptidase_M29,_and_Diacylglycerol/lipid_kinase


id: CL:2259
description: Mixed, incl. Short-chain fatty acid metabolic process, and Electron transfer flavoprotein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2259_Mixed,_incl._Short-chain_fatty_acid_metabolic_process,_and_Electron_transfer_flavoprotein_domain


id: CL:2260
description: Mixed, incl. Butyrate metabolic process, and Electron transfer flavoprotein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2260_Mixed,_incl._Butyrate_metabolic_process,_and_Electron_transfer_flavoprotein_domain


id: CL:2262
description: Mixed, incl. Butyrate metabolic process, and Electron transfer flavoprotein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2262_Mixed,_incl._Butyrate_metabolic_process,_and_Electron_transfer_flavoprotein_domain


id: CL:2263
description: Mixed, incl. Butyrate metabolic process, and Electron transfer flavoprotein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2263_Mixed,_incl._Butyrate_metabolic_process,_and_Electron_transfer_flavoprotein_domain


id: CL:2264
description: Mixed, incl. Butyrate metabolic process, and Electron transfer flavoprotein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2264_Mixed,_incl._Butyrate_metabolic_process,_and_Electron_transfer_flavoprotein_domain


id: CL:2265
description: Butyrate metabolic process, and Electron transfer flavoprotein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2265_Butyrate_metabolic_process,_and_Electron_transfer_flavoprotein_domain


id: CL:2266
description: Butyrate metabolic process, and Electron transfer flavoprotein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2266_Butyrate_metabolic_process,_and_Electron_transfer_flavoprotein_domain


id: CL:2267
description: Butyrate metabolic process, and AMP-binding enzyme C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2267_Butyrate_metabolic_process,_and_AMP-binding_enzyme_C-terminal_domain


id: CL:2269
description: Butyrate metabolic process, and Enoyl-CoA hydratase, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2269_Butyrate_metabolic_process,_and_Enoyl-CoA_hydratase,_C-terminal


id: CL:2273
description: Thiolase, and 3-hydroxyacyl-CoA dehydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2273_Thiolase,_and_3-hydroxyacyl-CoA_dehydrogenase


id: CL:2274
description: Thiolase, active site, and Enoyl-CoA hydratase/isomerase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2274_Thiolase,_active_site,_and_Enoyl-CoA_hydratase/isomerase


id: CL:2285
description: 3-hydroxyacyl-CoA dehydrogenase, and Thiolase, N-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2285_3-hydroxyacyl-CoA_dehydrogenase,_and_Thiolase,_N-terminal_domain


id: CL:2295
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2295_Mixed,_incl._3-hydroxyacyl-CoA_dehydrogenase,_NAD_binding_domain,_and_Enoyl-CoA_hydratase,_C-terminal

description:
  Mixed, incl. 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain, and Enoyl-CoA hydratase, C-terminal


id: CL:2331
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2331_Mixed,_incl._Electron_transfer_flavoprotein-ubiquinone_oxidoreductase,_4Fe-4S,_and_FAD-binding_domain

description:
  Mixed, incl. Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S, and FAD-binding domain


id: CL:2346
description: Electron transfer flavoprotein domain, and acyl-CoA dehydrogenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2346_Electron_transfer_flavoprotein_domain,_and_acyl-CoA_dehydrogenase_activity


id: CL:2347
description: Electron transfer flavoprotein domain, and Acyl-CoA dehydrogenase, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2347_Electron_transfer_flavoprotein_domain,_and_Acyl-CoA_dehydrogenase,_conserved_site


id: CL:2349
description: Electron transfer flavoprotein domain, and FAD binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2349_Electron_transfer_flavoprotein_domain,_and_FAD_binding_domain


id: CL:2350
description: Electron transfer flavoprotein domain, and FAD binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2350_Electron_transfer_flavoprotein_domain,_and_FAD_binding_domain


id: CL:2351
description: Mixed, incl. FAD binding domain, and Organelle membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2351_Mixed,_incl._FAD_binding_domain,_and_Organelle_membrane


id: CL:2366
description: Mixed, incl. FAD-binding domain, and Organelle membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2366_Mixed,_incl._FAD-binding_domain,_and_Organelle_membrane


id: CL:2376
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2376_Mixed,_incl._Electron_transfer_flavoprotein,_alpha_subunit,_N-terminal,_and_Electron_transfer_flavoprotein,_beta-subunit,_conserved_site

description:
  Mixed, incl. Electron transfer flavoprotein, alpha subunit, N-terminal, and Electron transfer flavoprotein, beta-subunit, conserved site


id: CL:2400
description: Mixed, incl. Electron transfer flavoprotein, beta-subunit, conserved site, and FAD-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2400_Mixed,_incl._Electron_transfer_flavoprotein,_beta-subunit,_conserved_site,_and_FAD-binding_domain


id: CL:2411
description: Mixed, incl. Enoyl-CoA hydratase/isomerase, conserved site, and FAD-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2411_Mixed,_incl._Enoyl-CoA_hydratase/isomerase,_conserved_site,_and_FAD-binding_domain


id: CL:2423
description: CoA-transferase family III, and Acyl-CoA dehydrogenase, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2423_CoA-transferase_family_III,_and_Acyl-CoA_dehydrogenase,_conserved_site


id: CL:2432
description: Mixed, incl. 4Fe-4S dicluster domain, and Electron transfer flavoprotein, alpha subunit, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2432_Mixed,_incl._4Fe-4S_dicluster_domain,_and_Electron_transfer_flavoprotein,_alpha_subunit,_N-terminal


id: CL:244
description: UTP metabolic process, and Ribosomal protein S5 domain 2-type fold, subgroup
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:244_UTP_metabolic_process,_and_Ribosomal_protein_S5_domain_2-type_fold,_subgroup


id: CL:2441
description: Mixed, incl. HI0933-like protein, and Biosynthesis of enediyne antibiotics
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2441_Mixed,_incl._HI0933-like_protein,_and_Biosynthesis_of_enediyne_antibiotics


id: CL:2451
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2451_Mixed,_incl._Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_with_a_flavin_as_acceptor,_and_Toluene_degradation

description:
  Mixed, incl. Oxidoreductase activity, acting on the CH-CH group of donors, with a flavin as acceptor, and Toluene degradation


id: CL:2468
description: Mixed, incl. Acetokinase family, and Iron-containing alcohol dehydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2468_Mixed,_incl._Acetokinase_family,_and_Iron-containing_alcohol_dehydrogenase


id: CL:2469
description: Mixed, incl. Acetokinase family, and Phosphate acetyl/butyryltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2469_Mixed,_incl._Acetokinase_family,_and_Phosphate_acetyl/butyryltransferase


id: CL:2470
description: Acetokinase family, and Diol catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2470_Acetokinase_family,_and_Diol_catabolic_process


id: CL:2487
description: Pyruvate ferredoxin/flavodoxin oxidoreductase, and Butyrate kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2487_Pyruvate_ferredoxin/flavodoxin_oxidoreductase,_and_Butyrate_kinase


id: CL:2499
description: Iron-containing alcohol dehydrogenase, and Aldehyde dehydrogenase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2499_Iron-containing_alcohol_dehydrogenase,_and_Aldehyde_dehydrogenase_domain


id: CL:2501
description: Iron-type alcohol dehydrogenase-like, and Aldehyde dehydrogenase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2501_Iron-type_alcohol_dehydrogenase-like,_and_Aldehyde_dehydrogenase_domain


id: CL:2523
description: Mixed, incl. Glutamate catabolic process, and acetyl-CoA hydrolase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2523_Mixed,_incl._Glutamate_catabolic_process,_and_acetyl-CoA_hydrolase_activity


id: CL:2525
description: Glutamate catabolic process, and threonyl-tRNA aminoacylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2525_Glutamate_catabolic_process,_and_threonyl-tRNA_aminoacylation


id: CL:2537
description: Mixed, incl. acetyl-CoA hydrolase activity, and Monooxygenase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2537_Mixed,_incl._acetyl-CoA_hydrolase_activity,_and_Monooxygenase


id: CL:2550
description: Mixed, incl. Fatty acid biosynthesis, and Menaquinone biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2550_Mixed,_incl._Fatty_acid_biosynthesis,_and_Menaquinone_biosynthesis


id: CL:2551
description: Mixed, incl. Fatty acid biosynthesis, and Phosphopantetheine
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2551_Mixed,_incl._Fatty_acid_biosynthesis,_and_Phosphopantetheine


id: CL:2552
description: Mixed, incl. Fatty acid biosynthesis, and Phosphopantetheine binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2552_Mixed,_incl._Fatty_acid_biosynthesis,_and_Phosphopantetheine_binding


id: CL:2554
description: Fatty acid biosynthesis, and Phosphopantetheine binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2554_Fatty_acid_biosynthesis,_and_Phosphopantetheine_binding


id: CL:2555
description: Fatty acid biosynthesis, and Thioesterase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2555_Fatty_acid_biosynthesis,_and_Thioesterase_domain


id: CL:2559
description: Fatty acid biosynthesis, and Nitronate monooxygenase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2559_Fatty_acid_biosynthesis,_and_Nitronate_monooxygenase


id: CL:2575
description: CoA carboxylase activity, and Biotin
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2575_CoA_carboxylase_activity,_and_Biotin


id: CL:2596
description: Biosynthesis of siderophore group nonribosomal peptides, and Thioesterase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2596_Biosynthesis_of_siderophore_group_nonribosomal_peptides,_and_Thioesterase


id: CL:2622
description: D-Alanine metabolism, and Membrane bound O-acyl transferase, MBOAT
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2622_D-Alanine_metabolism,_and_Membrane_bound_O-acyl_transferase,_MBOAT


id: CL:2636
description: Mixed, incl. Menaquinone biosynthesis, and tRNA pseudouridine synthase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2636_Mixed,_incl._Menaquinone_biosynthesis,_and_tRNA_pseudouridine_synthase


id: CL:2660
description: Mixed, incl. Domain of unknown function (DUF362) , and Putative TM nitroreductase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2660_Mixed,_incl._Domain_of_unknown_function_(DUF362)_,_and_Putative_TM_nitroreductase


id: CL:2679
description: Mixed, incl. NTF2-like domain superfamily, and L-threonine 3-dehydrogenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2679_Mixed,_incl._NTF2-like_domain_superfamily,_and_L-threonine_3-dehydrogenase_activity


id: CL:2695
description: Mixed, incl. Oxidative phosphorylation, and Glyoxylate and dicarboxylate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2695_Mixed,_incl._Oxidative_phosphorylation,_and_Glyoxylate_and_dicarboxylate_metabolism


id: CL:2696
description: Mixed, incl. Oxidative phosphorylation, and Glyoxylate and dicarboxylate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2696_Mixed,_incl._Oxidative_phosphorylation,_and_Glyoxylate_and_dicarboxylate_metabolism


id: CL:2697
description: Mixed, incl. Oxidative phosphorylation, and FAD-dependent oxidoreductase 2, FAD binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2697_Mixed,_incl._Oxidative_phosphorylation,_and_FAD-dependent_oxidoreductase_2,_FAD_binding_domain


id: CL:2699
description: Mixed, incl. Oxidative phosphorylation, and FAD-dependent oxidoreductase 2, FAD binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2699_Mixed,_incl._Oxidative_phosphorylation,_and_FAD-dependent_oxidoreductase_2,_FAD_binding_domain


id: CL:2701
description: Mixed, incl. Oxidative phosphorylation, and FAD-dependent oxidoreductase 2, FAD binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2701_Mixed,_incl._Oxidative_phosphorylation,_and_FAD-dependent_oxidoreductase_2,_FAD_binding_domain


id: CL:2702
description: Mixed, incl. Oxidative phosphorylation, and FAD-dependent oxidoreductase 2, FAD binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2702_Mixed,_incl._Oxidative_phosphorylation,_and_FAD-dependent_oxidoreductase_2,_FAD_binding_domain


id: CL:2704
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2704_Mixed,_incl._Oxidoreductase_activity,_acting_on_NAD(P)H,_quinone_or_similar_compound_as_acceptor,_and_Antiporter_activity

description:
  Mixed, incl. Oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor, and Antiporter activity


id: CL:2705
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2705_Mixed,_incl._Oxidoreductase_activity,_acting_on_NAD(P)H,_quinone_or_similar_compound_as_acceptor,_and_2_iron,_2_sulfur_cluster_binding

description:
  Mixed, incl. Oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor, and 2 iron, 2 sulfur cluster binding


id: CL:2706
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2706_Mixed,_incl._Oxidoreductase_activity,_acting_on_NAD(P)H,_quinone_or_similar_compound_as_acceptor,_and_Rieske_[2Fe-2S]_domain

description:
  Mixed, incl. Oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor, and Rieske [2Fe-2S] domain


id: CL:2710
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2710_Oxidoreductase_activity,_acting_on_NAD(P)H,_quinone_or_similar_compound_as_acceptor,_and_Cytochrome_b/b6-like_domain_superfamily

description:
  Oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor, and Cytochrome b/b6-like domain superfamily


id: CL:2712
description: Quinone, and ATP synthesis coupled electron transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2712_Quinone,_and_ATP_synthesis_coupled_electron_transport


id: CL:2714
description: Quinone, and Proton-conducting membrane transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2714_Quinone,_and_Proton-conducting_membrane_transporter


id: CL:2744
description: Cytochrome b/b6-like domain superfamily, and Rieske [2Fe-2S] domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2744_Cytochrome_b/b6-like_domain_superfamily,_and_Rieske_[2Fe-2S]_domain


id: CL:2761
description: Mixed, incl. Formate dehydrogenase complex, and NuoE domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2761_Mixed,_incl._Formate_dehydrogenase_complex,_and_NuoE_domain


id: CL:2776
description: NADH dehydrogenase (ubiquinone) activity, and Antiporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2776_NADH_dehydrogenase_(ubiquinone)_activity,_and_Antiporter_activity


id: CL:2777
description: Glucose catabolic process, and NADH dehydrogenase (ubiquinone) activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2777_Glucose_catabolic_process,_and_NADH_dehydrogenase_(ubiquinone)_activity


id: CL:2800
description: FAD-dependent oxidoreductase 2, FAD binding domain, and Tricarboxylic acid cycle
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2800_FAD-dependent_oxidoreductase_2,_FAD_binding_domain,_and_Tricarboxylic_acid_cycle


id: CL:2802
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2802_Citrate_cycle_(TCA_cycle),_and_This_conserved_region_includes_the_FMN-binding_site_of_the_NqrC_protein_as_well_as_the_NosR_and_NirI_regulatory_proteins.

description:
  Citrate cycle (TCA cycle), and This conserved region includes the FMN-binding site of the NqrC protein as well as the NosR and NirI regulatory proteins.


id: CL:2803
description: Tricarboxylic acid cycle, and Malic oxidoreductase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2803_Tricarboxylic_acid_cycle,_and_Malic_oxidoreductase


id: CL:2804
description: Tricarboxylic acid cycle, and FAD-dependent oxidoreductase 2, FAD binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2804_Tricarboxylic_acid_cycle,_and_FAD-dependent_oxidoreductase_2,_FAD_binding_domain


id: CL:2807
description: Succinyl-CoA synthetase-like, and Glucose inhibited division protein A
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2807_Succinyl-CoA_synthetase-like,_and_Glucose_inhibited_division_protein_A


id: CL:2810
description: CoA-ligase, and Glucose inhibited division protein A
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2810_CoA-ligase,_and_Glucose_inhibited_division_protein_A


id: CL:2834
description: Malate dehydrogenase activity, and Citrate cycle (TCA cycle)
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2834_Malate_dehydrogenase_activity,_and_Citrate_cycle_(TCA_cycle)


id: CL:2850
description: FAD-dependent oxidoreductase 2, FAD binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2850_FAD-dependent_oxidoreductase_2,_FAD_binding_domain


id: CL:2864
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2864_FAD-dependent_oxidoreductase_2,_FAD_binding_domain,_and_This_conserved_region_includes_the_FMN-binding_site_of_the_NqrC_protein_as_well_as_the_NosR_and_NirI_regulatory_proteins.

description:
  FAD-dependent oxidoreductase 2, FAD binding domain, and This conserved region includes the FMN-binding site of the NqrC protein as well as the NosR and NirI regulatory proteins.


id: CL:2865
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2865_FAD-dependent_oxidoreductase_2,_FAD_binding_domain,_and_This_conserved_region_includes_the_FMN-binding_site_of_the_NqrC_protein_as_well_as_the_NosR_and_NirI_regulatory_proteins.

description:
  FAD-dependent oxidoreductase 2, FAD binding domain, and This conserved region includes the FMN-binding site of the NqrC protein as well as the NosR and NirI regulatory proteins.


id: CL:2889
description: Cytochrome complex, and Modified amino acid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2889_Cytochrome_complex,_and_Modified_amino_acid_transport


id: CL:2911
description: Mixed, incl. Ferredoxin hydrogenase activity, and ATPase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2911_Mixed,_incl._Ferredoxin_hydrogenase_activity,_and_ATPase_complex


id: CL:2912
description: Ferredoxin hydrogenase activity, and Nickel-dependent hydrogenase b-type cytochrome subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2912_Ferredoxin_hydrogenase_activity,_and_Nickel-dependent_hydrogenase_b-type_cytochrome_subunit


id: CL:2914
description: Ferredoxin hydrogenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2914_Ferredoxin_hydrogenase_activity


id: CL:2933
description: Mixed, incl. ATPase complex, and Hydrogenase maturation factor HypB
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2933_Mixed,_incl._ATPase_complex,_and_Hydrogenase_maturation_factor_HypB


id: CL:2944
description: Mixed, incl. FAD-linked oxidase, C-terminal, and Lactate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2944_Mixed,_incl._FAD-linked_oxidase,_C-terminal,_and_Lactate_transport


id: CL:2945
description: Mixed, incl. FAD-linked oxidase, C-terminal, and Glycolate oxidase, iron-sulphur subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2945_Mixed,_incl._FAD-linked_oxidase,_C-terminal,_and_Glycolate_oxidase,_iron-sulphur_subunit


id: CL:2947
description: FAD-linked oxidase, C-terminal, and Glycolate oxidase, iron-sulphur subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2947_FAD-linked_oxidase,_C-terminal,_and_Glycolate_oxidase,_iron-sulphur_subunit


id: CL:2949
description: FAD-linked oxidase, C-terminal, and Glycolate oxidase, iron-sulphur subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2949_FAD-linked_oxidase,_C-terminal,_and_Glycolate_oxidase,_iron-sulphur_subunit


id: CL:2984
description: Lactate metabolic process, and Lactate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:2984_Lactate_metabolic_process,_and_Lactate_transport


id: CL:300
description: Protein transport by the Sec complex, and Protein-transporting ATPase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:300_Protein_transport_by_the_Sec_complex,_and_Protein-transporting_ATPase_activity


id: CL:3009
description: Mixed, incl. succinate-CoA ligase complex, and Shikimate kinase, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3009_Mixed,_incl._succinate-CoA_ligase_complex,_and_Shikimate_kinase,_conserved_site


id: CL:3011
description: Mixed, incl. Glycosyltransferase Family 4, and Phosphoribosylglycinamide formyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3011_Mixed,_incl._Glycosyltransferase_Family_4,_and_Phosphoribosylglycinamide_formyltransferase_activity


id: CL:3025
description: succinate-CoA ligase complex, and Shikimate kinase, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3025_succinate-CoA_ligase_complex,_and_Shikimate_kinase,_conserved_site


id: CL:3036
description: Citrate lyase beta subunit-like, and Acyl carrier activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3036_Citrate_lyase_beta_subunit-like,_and_Acyl_carrier_activity


id: CL:3056
description: Cellular respiration, and TorD-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3056_Cellular_respiration,_and_TorD-like_superfamily


id: CL:3058
description: Cellular respiration, and Peptide binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3058_Cellular_respiration,_and_Peptide_binding


id: CL:3059
description: Cellular respiration, and Peptide binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3059_Cellular_respiration,_and_Peptide_binding


id: CL:3061
description: Cellular respiration, and Peptide binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3061_Cellular_respiration,_and_Peptide_binding


id: CL:3062
description: Cellular respiration, and Peptide binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3062_Cellular_respiration,_and_Peptide_binding


id: CL:3063
description: Cellular respiration, and TorD-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3063_Cellular_respiration,_and_TorD-like_superfamily


id: CL:3064
description: Cellular respiration, and TorD-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3064_Cellular_respiration,_and_TorD-like_superfamily


id: CL:3066
description: Cellular respiration, and TorD-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3066_Cellular_respiration,_and_TorD-like_superfamily


id: CL:3067
description: Cellular respiration, and TorD-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3067_Cellular_respiration,_and_TorD-like_superfamily


id: CL:3069
description: Sulfur metabolism, and TorD-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3069_Sulfur_metabolism,_and_TorD-like_superfamily


id: CL:3070
description: Mixed, incl. DMSO reductase anchor subunit (DmsC), and Molybdenum
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3070_Mixed,_incl._DMSO_reductase_anchor_subunit_(DmsC),_and_Molybdenum


id: CL:3071
description: Mixed, incl. DMSO reductase anchor subunit (DmsC), and Molybdenum
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3071_Mixed,_incl._DMSO_reductase_anchor_subunit_(DmsC),_and_Molybdenum


id: CL:3073
description: Mixed, incl. DMSO reductase anchor subunit (DmsC), and TorD-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3073_Mixed,_incl._DMSO_reductase_anchor_subunit_(DmsC),_and_TorD-like_superfamily


id: CL:3075
description: Mixed, incl. DMSO reductase anchor subunit (DmsC), and TorD-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3075_Mixed,_incl._DMSO_reductase_anchor_subunit_(DmsC),_and_TorD-like_superfamily


id: CL:3077
description: Mixed, incl. DMSO reductase anchor subunit (DmsC), and Dimethylsulphoxide reductase, chain B
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3077_Mixed,_incl._DMSO_reductase_anchor_subunit_(DmsC),_and_Dimethylsulphoxide_reductase,_chain_B


id: CL:3079
description: DMSO reductase anchor subunit (DmsC), and Dimethylsulphoxide reductase, chain B
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3079_DMSO_reductase_anchor_subunit_(DmsC),_and_Dimethylsulphoxide_reductase,_chain_B


id: CL:3093
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3093_Mixed,_incl._Dimethylsulphoxide_reductase,_chain_B,_and_Anaerobic_dimethyl_sulphoxide_reductase,_subunit_A,_DmsA/YnfE

description:
  Mixed, incl. Dimethylsulphoxide reductase, chain B, and Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE


id: CL:3114
description: Mixed, incl. DMSO reductase anchor subunit (DmsC), and 4Fe-4S dicluster domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3114_Mixed,_incl._DMSO_reductase_anchor_subunit_(DmsC),_and_4Fe-4S_dicluster_domain


id: CL:3141
description: Mixed, incl. DMSO reductase anchor subunit (DmsC), and Dimethylsulphoxide reductase, chain B
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3141_Mixed,_incl._DMSO_reductase_anchor_subunit_(DmsC),_and_Dimethylsulphoxide_reductase,_chain_B


id: CL:316
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:316_Mixed,_incl._Translation_initiation_factor_IF-2,_N-terminal,_and_Ribosomal_protein_L7Ae/L30e/S12e/Gadd45

description:
  Mixed, incl. Translation initiation factor IF-2, N-terminal, and Ribosomal protein L7Ae/L30e/S12e/Gadd45


id: CL:3168
description: Mixed, incl. 4Fe-4S binding domain, and DMSO reductase anchor subunit (DmsC)
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3168_Mixed,_incl._4Fe-4S_binding_domain,_and_DMSO_reductase_anchor_subunit_(DmsC)


id: CL:3179
description: Mixed, incl. NrfD family, and Putative dimethyl sulfoxide reductase catalytic subunit A, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3179_Mixed,_incl._NrfD_family,_and_Putative_dimethyl_sulfoxide_reductase_catalytic_subunit_A,_C-terminal


id: CL:3181
description: Mixed, incl. Polysulfide reductase, and Polysulphide reductase, NrfD
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3181_Mixed,_incl._Polysulfide_reductase,_and_Polysulphide_reductase,_NrfD


id: CL:3203
description: Mixed, incl. 4Fe-4S dicluster domain, and Molybdopterin cofactor binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3203_Mixed,_incl._4Fe-4S_dicluster_domain,_and_Molybdopterin_cofactor_binding


id: CL:3205
description: Mixed, incl. 4Fe-4S dicluster domain, and Acetylene hydratase, MopB domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3205_Mixed,_incl._4Fe-4S_dicluster_domain,_and_Acetylene_hydratase,_MopB_domain


id: CL:3207
description: Mixed, incl. Carboxypeptidase regulatory-like domain, and Acetylene hydratase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3207_Mixed,_incl._Carboxypeptidase_regulatory-like_domain,_and_Acetylene_hydratase


id: CL:3225
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3225_Mixed,_incl._Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_quinone_or_similar_compound_as_acceptor,_and_Putative_dimethyl_sulfoxide_reductase_catalytic_subunit_A,_C-terminal

description:
  Mixed, incl. Oxidoreductase activity, acting on CH or CH2 groups, quinone or similar compound as acceptor, and Putative dimethyl sulfoxide reductase catalytic subunit A, C-terminal


id: CL:3239
description: Mixed, incl. Formate dehydrogenase (NAD+) activity, and Formate dehydrogenase iron-sulphur subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3239_Mixed,_incl._Formate_dehydrogenase_(NAD+)_activity,_and_Formate_dehydrogenase_iron-sulphur_subunit


id: CL:3240
description: Mixed, incl. Formate dehydrogenase (NAD+) activity, and Formate dehydrogenase iron-sulphur subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3240_Mixed,_incl._Formate_dehydrogenase_(NAD+)_activity,_and_Formate_dehydrogenase_iron-sulphur_subunit


id: CL:3243
description: Formate dehydrogenase (NAD+) activity, and Formate dehydrogenase iron-sulphur subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3243_Formate_dehydrogenase_(NAD+)_activity,_and_Formate_dehydrogenase_iron-sulphur_subunit


id: CL:3261
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3261_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_iron-sulfur_protein_as_acceptor,_and_Nitrotoluene_degradation

description:
  Oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor, and Nitrotoluene degradation


id: CL:3270
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3270_Mixed,_incl._Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_quinone_or_similar_compound_as_acceptor,_and_Domain_present_in_phytochromes_and_cGMP-specific_phosphodiesterases.

description:
  Mixed, incl. Oxidoreductase activity, acting on CH or CH2 groups, quinone or similar compound as acceptor, and Domain present in phytochromes and cGMP-specific phosphodiesterases.


id: CL:3291
description: Mixed, incl. Doubled CXXCH motif (Paired_CXXCH_1), and Rhodanese Homology Domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3291_Mixed,_incl._Doubled_CXXCH_motif_(Paired_CXXCH_1),_and_Rhodanese_Homology_Domain


id: CL:3292
description: Mixed, incl. Rhodanese Homology Domain, and C4-dicarboxylate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3292_Mixed,_incl._Rhodanese_Homology_Domain,_and_C4-dicarboxylate_transport


id: CL:3294
description: Rhodanese Homology Domain, and Molybdopterin oxidoreductase, molybdopterin cofactor binding site
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3294_Rhodanese_Homology_Domain,_and_Molybdopterin_oxidoreductase,_molybdopterin_cofactor_binding_site


id: CL:3304
description: Mixed, incl. C4-dicarboxylate transport, and Doubled CXXCH motif (Paired_CXXCH_1)
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3304_Mixed,_incl._C4-dicarboxylate_transport,_and_Doubled_CXXCH_motif_(Paired_CXXCH_1)


id: CL:3313
description: Formate dehydrogenase (NAD+) activity, and 4Fe-4S binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3313_Formate_dehydrogenase_(NAD+)_activity,_and_4Fe-4S_binding_domain


id: CL:3329
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3329_Mixed,_incl._SpoVAC/SpoVAEB_sporulation_membrane_protein,_and_Carboxypeptidase_regulatory-like_domain

description:
  Mixed, incl. SpoVAC/SpoVAEB sporulation membrane protein, and Carboxypeptidase regulatory-like domain


id: CL:3341
description: Mixed, incl. Peptide binding, and 4Fe-4S binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3341_Mixed,_incl._Peptide_binding,_and_4Fe-4S_binding_domain


id: CL:3357
description: Mixed, incl. 4Fe-4S binding domain, and CdaR, GGDEF-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3357_Mixed,_incl._4Fe-4S_binding_domain,_and_CdaR,_GGDEF-like_domain


id: CL:337
description: RNA polymerase, and Regulation of DNA-templated transcription, elongation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:337_RNA_polymerase,_and_Regulation_of_DNA-templated_transcription,_elongation


id: CL:3376
description: Mixed, incl. DDE transposase sub-family, and Recombination-promoting nuclease RpnA
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3376_Mixed,_incl._DDE_transposase_sub-family,_and_Recombination-promoting_nuclease_RpnA


id: CL:3392
description: Mixed, incl. Nitrate metabolic process, and Ferritin-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3392_Mixed,_incl._Nitrate_metabolic_process,_and_Ferritin-like_superfamily


id: CL:3393
description: Nitrate metabolic process, and NarG-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3393_Nitrate_metabolic_process,_and_NarG-like_domain


id: CL:3398
description: Nitrate reductase complex, and Nitrate import
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3398_Nitrate_reductase_complex,_and_Nitrate_import


id: CL:3412
description: Cytochrome c552, and NapC/NirT cytochrome c superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3412_Cytochrome_c552,_and_NapC/NirT_cytochrome_c_superfamily


id: CL:3424
description: Ferritin-like superfamily, and Rubredoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3424_Ferritin-like_superfamily,_and_Rubredoxin


id: CL:3427
description: Rubredoxin, and Oxygen metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3427_Rubredoxin,_and_Oxygen_metabolic_process


id: CL:3447
description: Mixed, incl. 4Fe-4S binding domain, and Anti-sigma factor, zinc-finger domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3447_Mixed,_incl._4Fe-4S_binding_domain,_and_Anti-sigma_factor,_zinc-finger_domain_superfamily


id: CL:3449
description: Mixed, incl. 4Fe-4S binding domain, and 4Fe-4S binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3449_Mixed,_incl._4Fe-4S_binding_domain,_and_4Fe-4S_binding_domain


id: CL:3463
description: Mixed, incl. Anti-sigma factor, zinc-finger domain superfamily, and PBP superfamily domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3463_Mixed,_incl._Anti-sigma_factor,_zinc-finger_domain_superfamily,_and_PBP_superfamily_domain


id: CL:3473
description: Mixed, incl. Universal stress protein A family, and ABC transporter, substrate-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3473_Mixed,_incl._Universal_stress_protein_A_family,_and_ABC_transporter,_substrate-binding_protein


id: CL:3475
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3475_Mixed,_incl._Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_quinone_or_similar_compound_as_acceptor,_and_4Fe-4S_binding_domain

description:
  Mixed, incl. Oxidoreductase activity, acting on CH or CH2 groups, quinone or similar compound as acceptor, and 4Fe-4S binding domain


id: CL:3493
description: Mixed, incl. Acetylene hydratase, and Polysulfide reductase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3493_Mixed,_incl._Acetylene_hydratase,_and_Polysulfide_reductase


id: CL:3494
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3494_Mostly_uncharacterized,_incl._Uncharacterised_ArCR,_COG2043,_and_Tricarboxylic_acid_biosynthetic_process

description:
  Mostly uncharacterized, incl. Uncharacterised ArCR, COG2043, and Tricarboxylic acid biosynthetic process


id: CL:3496
description: Mixed, incl. Acetylene hydratase, and Hydrolase activity, hydrolyzing N-glycosyl compounds
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3496_Mixed,_incl._Acetylene_hydratase,_and_Hydrolase_activity,_hydrolyzing_N-glycosyl_compounds


id: CL:3516
description: Mixed, incl. Methyltransferase, class D, and Transferase 1, rSAM/selenodomain-associated
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3516_Mixed,_incl._Methyltransferase,_class_D,_and_Transferase_1,_rSAM/selenodomain-associated


id: CL:3530
description: Mixed, incl. Zinc-ribbon domain, and FKBP-type peptidyl-prolyl cis-trans isomerase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3530_Mixed,_incl._Zinc-ribbon_domain,_and_FKBP-type_peptidyl-prolyl_cis-trans_isomerase


id: CL:3546
description: Mixed, incl. Zinc finger, RanBP2-type superfamily, and N-acetyltransferase RimI/Ard1
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3546_Mixed,_incl._Zinc_finger,_RanBP2-type_superfamily,_and_N-acetyltransferase_RimI/Ard1


id: CL:3548
description: Zinc finger, RanBP2-type superfamily, and Acetylene hydratase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3548_Zinc_finger,_RanBP2-type_superfamily,_and_Acetylene_hydratase


id: CL:3567
description: SpoVA, and Ribosomal protein L40e superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3567_SpoVA,_and_Ribosomal_protein_L40e_superfamily


id: CL:3583
description: Mixed, incl. Symport, and Na+/H+ antiporter family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3583_Mixed,_incl._Symport,_and_Na+/H+_antiporter_family


id: CL:3585
description: Symport, and Na+/H+ antiporter family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3585_Symport,_and_Na+/H+_antiporter_family


id: CL:3597
description: Mixed, incl. Na+/H+ antiporter family, and RidA family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3597_Mixed,_incl._Na+/H+_antiporter_family,_and_RidA_family


id: CL:3607
description: Mixed, incl. TAT protein transport complex, and Potassium ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3607_Mixed,_incl._TAT_protein_transport_complex,_and_Potassium_ion_transport


id: CL:3608
description: TAT protein transport complex, and Potassium ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3608_TAT_protein_transport_complex,_and_Potassium_ion_transport


id: CL:3610
description: Cation transporter, and TrkA-C domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3610_Cation_transporter,_and_TrkA-C_domain


id: CL:3636
description: Acetyltransferase (GNAT) domain, and Mtb iron assimilation by chelation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3636_Acetyltransferase_(GNAT)_domain,_and_Mtb_iron_assimilation_by_chelation


id: CL:365
description: Aminoacyl-tRNA synthetase, class Ia, anticodon-binding, and Threonyl/alanyl tRNA synthetase, SAD
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:365_Aminoacyl-tRNA_synthetase,_class_Ia,_anticodon-binding,_and_Threonyl/alanyl_tRNA_synthetase,_SAD


id: CL:3652
description: Mixed, incl. Organic hydroxy compound biosynthetic process, and NYN domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3652_Mixed,_incl._Organic_hydroxy_compound_biosynthetic_process,_and_NYN_domain


id: CL:3653
description: Organic hydroxy compound biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3653_Organic_hydroxy_compound_biosynthetic_process


id: CL:3663
description: Thiamine biosynthesis, and Amino acid salvage
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3663_Thiamine_biosynthesis,_and_Amino_acid_salvage


id: CL:3672
description: Mixed, incl. NYN domain, and Iron-dependent Transcriptional regulator
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3672_Mixed,_incl._NYN_domain,_and_Iron-dependent_Transcriptional_regulator


id: CL:368
description: Aminoacyl-tRNA synthetase, class Ia, anticodon-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:368_Aminoacyl-tRNA_synthetase,_class_Ia,_anticodon-binding


id: CL:3696
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3696_Mostly_uncharacterized,_incl._Protein_of_unknown_function_DUF3102,_and_Ell_wall_binding_domain_2_(CWB2)

description:
  Mostly uncharacterized, incl. Protein of unknown function DUF3102, and Ell wall binding domain 2 (CWB2)


id: CL:3697
description: Mixed, incl. Protein of unknown function DUF3102, and Ell wall binding domain 2 (CWB2)
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3697_Mixed,_incl._Protein_of_unknown_function_DUF3102,_and_Ell_wall_binding_domain_2_(CWB2)


id: CL:3698
description: Mixed, incl. Protein of unknown function DUF3102, and Ell wall binding domain 2 (CWB2)
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3698_Mixed,_incl._Protein_of_unknown_function_DUF3102,_and_Ell_wall_binding_domain_2_(CWB2)


id: CL:3699
description: Mixed, incl. Protein of unknown function DUF3102, and Ell wall binding domain 2 (CWB2)
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3699_Mixed,_incl._Protein_of_unknown_function_DUF3102,_and_Ell_wall_binding_domain_2_(CWB2)


id: CL:3701
description: Mixed, incl. Protein of unknown function DUF3102, and Ell wall binding domain 2 (CWB2)
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3701_Mixed,_incl._Protein_of_unknown_function_DUF3102,_and_Ell_wall_binding_domain_2_(CWB2)


id: CL:3703
description: Mixed, incl. Protein of unknown function DUF3102, and Ell wall binding domain 2 (CWB2)
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3703_Mixed,_incl._Protein_of_unknown_function_DUF3102,_and_Ell_wall_binding_domain_2_(CWB2)


id: CL:3705
description: Mixed, incl. Ell wall binding domain 2 (CWB2), and Protein of unknown function DUF3102
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3705_Mixed,_incl._Ell_wall_binding_domain_2_(CWB2),_and_Protein_of_unknown_function_DUF3102


id: CL:3707
description: Mixed, incl. Ell wall binding domain 2 (CWB2), and NYN domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3707_Mixed,_incl._Ell_wall_binding_domain_2_(CWB2),_and_NYN_domain


id: CL:3710
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3710_Mixed,_incl._Signal_transduction_histidine_kinase,_sporulation_regulator_SpoOB,_and_Transglycosylase_SLT_domain

description:
  Mixed, incl. Signal transduction histidine kinase, sporulation regulator SpoOB, and Transglycosylase SLT domain


id: CL:3712
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3712_Mixed,_incl._Signal_transduction_histidine_kinase,_sporulation_regulator_SpoOB,_and_Transglycosylase_SLT_domain

description:
  Mixed, incl. Signal transduction histidine kinase, sporulation regulator SpoOB, and Transglycosylase SLT domain


id: CL:3731
description: Mixed, incl. NYN domain, and Voltage-dependent anion channel
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3731_Mixed,_incl._NYN_domain,_and_Voltage-dependent_anion_channel


id: CL:3749
description: PmbA/TldA metallopeptidase domain 1, and Bacterial Ig-like domain 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3749_PmbA/TldA_metallopeptidase_domain_1,_and_Bacterial_Ig-like_domain_2


id: CL:3765
description: Mixed, incl. Protein of unknown function DUF3102, and Ami_2
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3765_Mixed,_incl._Protein_of_unknown_function_DUF3102,_and_Ami_2


id: CL:3767
description: Protein of unknown function DUF3102, and Ami_2
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3767_Protein_of_unknown_function_DUF3102,_and_Ami_2


id: CL:3769
description: Protein of unknown function DUF3102, and Domain of unknown function DUF4367
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3769_Protein_of_unknown_function_DUF3102,_and_Domain_of_unknown_function_DUF4367


id: CL:3803
description: Mixed, incl. FlaG protein, and Ell wall binding domain 2 (CWB2)
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3803_Mixed,_incl._FlaG_protein,_and_Ell_wall_binding_domain_2_(CWB2)


id: CL:3822
description: Mixed, incl. Protein of unknown function DUF2922, and Protein of unknown function DUF1659
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3822_Mixed,_incl._Protein_of_unknown_function_DUF2922,_and_Protein_of_unknown_function_DUF1659


id: CL:3824
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3824_Mostly_uncharacterized,_incl._Sporulation_protein_YlmC/YmxH,_and_Protein_of_unknown_function_DUF2922

description:
  Mostly uncharacterized, incl. Sporulation protein YlmC/YmxH, and Protein of unknown function DUF2922


id: CL:3826
description: Mixed, incl. RNA polymerase sigma factor 70, region 4 type 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3826_Mixed,_incl._RNA_polymerase_sigma_factor_70,_region_4_type_2


id: CL:3853
description: Mixed, incl. Protein of unknown function DUF2922, and Protein of unknown function DUF1659
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3853_Mixed,_incl._Protein_of_unknown_function_DUF2922,_and_Protein_of_unknown_function_DUF1659


id: CL:3862
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3862_Mostly_uncharacterized,_incl._SASP,_alpha/beta-type_superfamily,_and_Fructose_and_mannose_metabolism

description:
  Mostly uncharacterized, incl. SASP, alpha/beta-type superfamily, and Fructose and mannose metabolism


id: CL:3863
description: Mostly uncharacterized, incl. Fructose and mannose metabolism, and Glycosyl transferases group 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3863_Mostly_uncharacterized,_incl._Fructose_and_mannose_metabolism,_and_Glycosyl_transferases_group_1


id: CL:3864
description: Mostly uncharacterized, incl. Fructose and mannose metabolism, and Glycosyl transferases group 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3864_Mostly_uncharacterized,_incl._Fructose_and_mannose_metabolism,_and_Glycosyl_transferases_group_1


id: CL:3866
description: Mostly uncharacterized, incl. Glycosyl transferases group 1, and HutP
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3866_Mostly_uncharacterized,_incl._Glycosyl_transferases_group_1,_and_HutP


id: CL:3868
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3868_Mostly_uncharacterized,_incl._Response_to_osmotic_stress,_and_LexA-binding,_inner_membrane-associated_putative_hydrolase

description:
  Mostly uncharacterized, incl. Response to osmotic stress, and LexA-binding, inner membrane-associated putative hydrolase


id: CL:3870
description: Mixed, incl. Methyltransferase domain, and Bacterial extracellular solute-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3870_Mixed,_incl._Methyltransferase_domain,_and_Bacterial_extracellular_solute-binding_protein


id: CL:3884
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3884_Mixed,_incl._Response_to_osmotic_stress,_and_LexA-binding,_inner_membrane-associated_putative_hydrolase

description:
  Mixed, incl. Response to osmotic stress, and LexA-binding, inner membrane-associated putative hydrolase


id: CL:3910
description: Mixed, incl. Cupin domain, and Methyltransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3910_Mixed,_incl._Cupin_domain,_and_Methyltransferase_domain


id: CL:3913
description: Mixed, incl. Methyltransferase domain, and Prokaryotic cytochrome b561
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3913_Mixed,_incl._Methyltransferase_domain,_and_Prokaryotic_cytochrome_b561


id: CL:3931
description: Mixed, incl. Cellulose binding, and Spore wall
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3931_Mixed,_incl._Cellulose_binding,_and_Spore_wall


id: CL:3943
description: Mixed, incl. SASP, alpha/beta-type superfamily, and EamA-like transporter family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3943_Mixed,_incl._SASP,_alpha/beta-type_superfamily,_and_EamA-like_transporter_family


id: CL:3945
description: Mixed, incl. Peptidase M41, and RNA polymerase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3945_Mixed,_incl._Peptidase_M41,_and_RNA_polymerase


id: CL:3971
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3971_Mostly_uncharacterized,_incl._PucR_C-terminal_helix-turn-helix_domain,_and_Lambda_repressor-like,_DNA-binding_domain_superfamily

description:
  Mostly uncharacterized, incl. PucR C-terminal helix-turn-helix domain, and Lambda repressor-like, DNA-binding domain superfamily


id: CL:3973
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3973_Mostly_uncharacterized,_incl._PucR_C-terminal_helix-turn-helix_domain,_and_Lambda_repressor-like,_DNA-binding_domain_superfamily

description:
  Mostly uncharacterized, incl. PucR C-terminal helix-turn-helix domain, and Lambda repressor-like, DNA-binding domain superfamily


id: CL:3975
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3975_Mostly_uncharacterized,_incl._PucR_C-terminal_helix-turn-helix_domain,_and_Lambda_repressor-like,_DNA-binding_domain_superfamily

description:
  Mostly uncharacterized, incl. PucR C-terminal helix-turn-helix domain, and Lambda repressor-like, DNA-binding domain superfamily


id: CL:3977
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3977_Mostly_uncharacterized,_incl._PucR_C-terminal_helix-turn-helix_domain,_and_Ell_wall_binding_domain_2_(CWB2)

description:
  Mostly uncharacterized, incl. PucR C-terminal helix-turn-helix domain, and Ell wall binding domain 2 (CWB2)


id: CL:3979
description: Mixed, incl. PucR C-terminal helix-turn-helix domain, and Ell wall binding domain 2 (CWB2)
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3979_Mixed,_incl._PucR_C-terminal_helix-turn-helix_domain,_and_Ell_wall_binding_domain_2_(CWB2)


id: CL:398
description: Mixed, incl. Pseudouridine synthesis, and RNA helicase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:398_Mixed,_incl._Pseudouridine_synthesis,_and_RNA_helicase_activity


id: CL:3981
description: Mostly uncharacterized, incl. Ell wall binding domain 2 (CWB2), and Zinc-ribbon domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3981_Mostly_uncharacterized,_incl._Ell_wall_binding_domain_2_(CWB2),_and_Zinc-ribbon_domain


id: CL:3982
description: Mostly uncharacterized, incl. Ell wall binding domain 2 (CWB2), and Zinc-ribbon domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3982_Mostly_uncharacterized,_incl._Ell_wall_binding_domain_2_(CWB2),_and_Zinc-ribbon_domain


id: CL:3985
description: Mostly uncharacterized, incl. Zinc-ribbon domain, and Domain of unknown function DUF4183
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3985_Mostly_uncharacterized,_incl._Zinc-ribbon_domain,_and_Domain_of_unknown_function_DUF4183


id: CL:3988
description: Mostly uncharacterized, incl. Zinc-ribbon domain, and Domain of unknown function DUF4183
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3988_Mostly_uncharacterized,_incl._Zinc-ribbon_domain,_and_Domain_of_unknown_function_DUF4183


id: CL:3992
description: Mixed, incl. Zinc-ribbon domain, and Putative heavy-metal chelation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3992_Mixed,_incl._Zinc-ribbon_domain,_and_Putative_heavy-metal_chelation


id: CL:3996
description: Mixed, incl. Putative heavy-metal chelation, and MerR-type HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:3996_Mixed,_incl._Putative_heavy-metal_chelation,_and_MerR-type_HTH_domain


id: CL:400
description: Pseudouridine synthesis, and tRNA/rRNA methyltransferase, SpoU type
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:400_Pseudouridine_synthesis,_and_tRNA/rRNA_methyltransferase,_SpoU_type


id: CL:403
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:403_Mixed,_incl._RNA_helicase,_DEAD-box_type,_Q_motif,_and_RNA_2-O_ribose_methyltransferase_substrate_binding

description:
  Mixed, incl. RNA helicase, DEAD-box type, Q motif, and RNA 2-O ribose methyltransferase substrate binding


id: CL:4039
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4039_Mixed,_incl._CAAX_prenyl_protease_2,_MmRce1-like,_and_CDP-diacylglycerol--glycerol-3-phosphate_3-phosphatidyltransferase

description:
  Mixed, incl. CAAX prenyl protease 2, MmRce1-like, and CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase


id: CL:4054
description: PucR C-terminal helix-turn-helix domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4054_PucR_C-terminal_helix-turn-helix_domain


id: CL:4091
description: Mixed, incl. Nitroreductase family, and NUDIX domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4091_Mixed,_incl._Nitroreductase_family,_and_NUDIX_domain


id: CL:4093
description: Mixed, incl. Nitroreductase family, and Glyoxalase-like domain, group 6
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4093_Mixed,_incl._Nitroreductase_family,_and_Glyoxalase-like_domain,_group_6


id: CL:4095
description: Mixed, incl. Lysin motif, and Tetratricopeptide-like helical domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4095_Mixed,_incl._Lysin_motif,_and_Tetratricopeptide-like_helical_domain_superfamily


id: CL:4132
description: Mixed, incl. Protein transport across the cell outer membrane, and Horizontal gene transfer
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4132_Mixed,_incl._Protein_transport_across_the_cell_outer_membrane,_and_Horizontal_gene_transfer


id: CL:4134
description: Mixed, incl. Protein transport across the cell outer membrane, and Soluble ligand binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4134_Mixed,_incl._Protein_transport_across_the_cell_outer_membrane,_and_Soluble_ligand_binding_domain


id: CL:4138
description: Protein transport across the cell outer membrane, and Type IV leader peptidase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4138_Protein_transport_across_the_cell_outer_membrane,_and_Type_IV_leader_peptidase_family


id: CL:4158
description: Mixed, incl. CxxC-x17-CxxC domain, and tRNA endonuclease-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4158_Mixed,_incl._CxxC-x17-CxxC_domain,_and_tRNA_endonuclease-like_domain_superfamily


id: CL:4171
description: Cell differentiation, and Protein of unknown function DUF421
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4171_Cell_differentiation,_and_Protein_of_unknown_function_DUF421


id: CL:4172
description: Cell differentiation, and Manganese catalase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4172_Cell_differentiation,_and_Manganese_catalase


id: CL:4173
description: Cell differentiation, and GerMN domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4173_Cell_differentiation,_and_GerMN_domain


id: CL:4180
description: Sporulation, and Peptidase HybD-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4180_Sporulation,_and_Peptidase_HybD-like_domain_superfamily


id: CL:4181
description: Sporulation, and Peptidase HybD-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4181_Sporulation,_and_Peptidase_HybD-like_domain_superfamily


id: CL:4182
description: Mixed, incl. Sporulation, and SpoVA
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4182_Mixed,_incl._Sporulation,_and_SpoVA


id: CL:4185
description: Mixed, incl. Sporulation, and Peptidase S1, PA clan
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4185_Mixed,_incl._Sporulation,_and_Peptidase_S1,_PA_clan


id: CL:4198
description: Mixed, incl. SpoVA, and STAS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4198_Mixed,_incl._SpoVA,_and_STAS_domain


id: CL:4213
description: RNA polymerase sigma-70 region 4, and Sporulation protein YlmC/YmxH
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4213_RNA_polymerase_sigma-70_region_4,_and_Sporulation_protein_YlmC/YmxH


id: CL:422
description: RNA helicase activity, and Metal binding domain of Ada
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:422_RNA_helicase_activity,_and_Metal_binding_domain_of_Ada


id: CL:4228
description: Stage III sporulation protein AC/AD family, and Sporulation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4228_Stage_III_sporulation_protein_AC/AD_family,_and_Sporulation


id: CL:4242
description: Mixed, incl. YabP family, and Aspartyl protease
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4242_Mixed,_incl._YabP_family,_and_Aspartyl_protease


id: CL:4310
description: GerMN domain, and Haloacid dehalogenase-like hydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4310_GerMN_domain,_and_Haloacid_dehalogenase-like_hydrolase


id: CL:4326
description: Manganese catalase, and Alcohol dehydrogenase, zinc-type, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4326_Manganese_catalase,_and_Alcohol_dehydrogenase,_zinc-type,_conserved_site


id: CL:4335
description: Mixed, incl. PAS fold, and Zinc ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4335_Mixed,_incl._PAS_fold,_and_Zinc_ion_transport


id: CL:4348
description: Mixed, incl. Putative peptidoglycan binding domain, and Regulation of translational initiation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4348_Mixed,_incl._Putative_peptidoglycan_binding_domain,_and_Regulation_of_translational_initiation


id: CL:4361
description: Mixed, incl. ABC-2 transporter, and ABC transporter-like, ATP-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4361_Mixed,_incl._ABC-2_transporter,_and_ABC_transporter-like,_ATP-binding_domain


id: CL:4362
description: Mostly uncharacterized, incl. ABC-2 transporter, and ABC-2 family transporter protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4362_Mostly_uncharacterized,_incl._ABC-2_transporter,_and_ABC-2_family_transporter_protein


id: CL:4363
description: Mixed, incl. ABC-2 transporter, and ABC-2 family transporter protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4363_Mixed,_incl._ABC-2_transporter,_and_ABC-2_family_transporter_protein


id: CL:4364
description: Mixed, incl. ABC-2 transporter, and Transcription regulator PadR, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4364_Mixed,_incl._ABC-2_transporter,_and_Transcription_regulator_PadR,_N-terminal


id: CL:4365
description: Mixed, incl. ABC-2 transporter, and Cytochrome-c oxidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4365_Mixed,_incl._ABC-2_transporter,_and_Cytochrome-c_oxidase_activity


id: CL:4367
description: Mixed, incl. Cytochrome-c oxidase activity, and Pectin lyase fold
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4367_Mixed,_incl._Cytochrome-c_oxidase_activity,_and_Pectin_lyase_fold


id: CL:4368
description: Mixed, incl. Pectin lyase fold, and ABC-2 family transporter protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4368_Mixed,_incl._Pectin_lyase_fold,_and_ABC-2_family_transporter_protein


id: CL:4377
description: Cytochrome-c oxidase activity, and Ion-translocating oxidoreductase complex, subunit RnfG/RsxG
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4377_Cytochrome-c_oxidase_activity,_and_Ion-translocating_oxidoreductase_complex,_subunit_RnfG/RsxG


id: CL:439
description: Ribonuclease J, and K Homology domain, type 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:439_Ribonuclease_J,_and_K_Homology_domain,_type_1


id: CL:4392
description: ABC-2 transporter, and ABC transporter-like, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4392_ABC-2_transporter,_and_ABC_transporter-like,_conserved_site


id: CL:4409
description: Protein of unknown function (DUF1048), and ABC-2 type transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4409_Protein_of_unknown_function_(DUF1048),_and_ABC-2_type_transporter


id: CL:4425
description: Mixed, incl. Uncharacterised ArCR, COG2043, and ABC-2 family transporter protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4425_Mixed,_incl._Uncharacterised_ArCR,_COG2043,_and_ABC-2_family_transporter_protein


id: CL:4435
description: Mixed, incl. RNA ligase activity, and Uridylyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4435_Mixed,_incl._RNA_ligase_activity,_and_Uridylyltransferase_activity


id: CL:4453
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4453_Mostly_uncharacterized,_incl._Bacterial_regulatory_proteins,_gntR_family,_and_Establishment_of_competence_for_transformation

description:
  Mostly uncharacterized, incl. Bacterial regulatory proteins, gntR family, and Establishment of competence for transformation


id: CL:4454
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4454_Mixed,_incl._Bacterial_regulatory_proteins,_gntR_family,_and_Helix_turn_helix_gluconate_operon_transcriptional_repressor

description:
  Mixed, incl. Bacterial regulatory proteins, gntR family, and Helix_turn_helix gluconate operon transcriptional repressor


id: CL:4467
description: Mixed, incl. Establishment of competence for transformation, and Transposase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4467_Mixed,_incl._Establishment_of_competence_for_transformation,_and_Transposase_activity


id: CL:4476
description: Mostly uncharacterized, incl. Phosphodiester glycosidase, and CxxC-x17-CxxC domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4476_Mostly_uncharacterized,_incl._Phosphodiester_glycosidase,_and_CxxC-x17-CxxC_domain


id: CL:4478
description: Mixed, incl. Protein of unknown function DUF6530, and GIY-YIG endonuclease superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4478_Mixed,_incl._Protein_of_unknown_function_DUF6530,_and_GIY-YIG_endonuclease_superfamily


id: CL:4507
description: Mostly uncharacterized, incl. VWA-like domain, and KilA, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4507_Mostly_uncharacterized,_incl._VWA-like_domain,_and_KilA,_N-terminal


id: CL:4509
description: Mixed, incl. VWA-like domain, and Domain of unknown function DUF1540
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4509_Mixed,_incl._VWA-like_domain,_and_Domain_of_unknown_function_DUF1540


id: CL:4512
description: Mixed, incl. VWA-like domain, and Domain of unknown function DUF1540
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4512_Mixed,_incl._VWA-like_domain,_and_Domain_of_unknown_function_DUF1540


id: CL:4539
description: Mixed, incl. PspC domain, and PspA/IM30
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4539_Mixed,_incl._PspC_domain,_and_PspA/IM30


id: CL:4540
description: Mixed, incl. Band 7/SPFH domain superfamily, and PspA/IM30
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4540_Mixed,_incl._Band_7/SPFH_domain_superfamily,_and_PspA/IM30


id: CL:4567
description: Mixed, incl. Sulfur relay system, and Peptidase U32
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4567_Mixed,_incl._Sulfur_relay_system,_and_Peptidase_U32


id: CL:4568
description: Mostly uncharacterized, incl. Peptidase U32, and ThiF family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4568_Mostly_uncharacterized,_incl._Peptidase_U32,_and_ThiF_family


id: CL:457
description: Mixed, incl. tRNA processing, and rRNA methylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:457_Mixed,_incl._tRNA_processing,_and_rRNA_methylation


id: CL:4571
description: Mixed, incl. Glycosyl transferase family 2, and Detection of stimulus
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4571_Mixed,_incl._Glycosyl_transferase_family_2,_and_Detection_of_stimulus


id: CL:4587
description: Mixed, incl. RNA capping, and Aldo-keto reductase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4587_Mixed,_incl._RNA_capping,_and_Aldo-keto_reductase


id: CL:460
description: Mixed, incl. MnmG, N-terminal domain, and Protein carrier chaperone
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:460_Mixed,_incl._MnmG,_N-terminal_domain,_and_Protein_carrier_chaperone


id: CL:4603
description: Mixed, incl. Iron-sulfur cluster assembly, and Transcription regulator Rrf2
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4603_Mixed,_incl._Iron-sulfur_cluster_assembly,_and_Transcription_regulator_Rrf2


id: CL:4604
description: Mixed, incl. Iron-sulfur cluster assembly, and tRNA methyl transferase HUP domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4604_Mixed,_incl._Iron-sulfur_cluster_assembly,_and_tRNA_methyl_transferase_HUP_domain


id: CL:4607
description: Iron-sulfur cluster assembly, and tRNA methyl transferase HUP domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4607_Iron-sulfur_cluster_assembly,_and_tRNA_methyl_transferase_HUP_domain


id: CL:4623
description: Mixed, incl. Transcription regulator IclR, N-terminal, and CNNM, transmembrane domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4623_Mixed,_incl._Transcription_regulator_IclR,_N-terminal,_and_CNNM,_transmembrane_domain


id: CL:4632
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4632_Mostly_uncharacterized,_incl._Putative_inner_membrane_exporter,_YdcZ,_and_Thiolester_hydrolase_activity

description:
  Mostly uncharacterized, incl. Putative inner membrane exporter, YdcZ, and Thiolester hydrolase activity


id: CL:4633
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4633_Mixed,_incl._Putative_inner_membrane_exporter,_YdcZ,_and_Endoribonuclease_activity,_producing_5-phosphomonoesters

description:
  Mixed, incl. Putative inner membrane exporter, YdcZ, and Endoribonuclease activity, producing 5-phosphomonoesters


id: CL:4635
description: Mixed, incl. Peptidase M3A/M3B, and RNA-DNA hybrid ribonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4635_Mixed,_incl._Peptidase_M3A/M3B,_and_RNA-DNA_hybrid_ribonuclease_activity


id: CL:4653
description: Mixed, incl. Putative inner membrane exporter, YdcZ, and Tautomerase enzyme
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4653_Mixed,_incl._Putative_inner_membrane_exporter,_YdcZ,_and_Tautomerase_enzyme


id: CL:4665
description: Mixed, incl. NUDIX hydrolase, and Regulation of signaling
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4665_Mixed,_incl._NUDIX_hydrolase,_and_Regulation_of_signaling


id: CL:4679
description: Mixed, incl. RNA polymerase sigma-70 like, and Beta propeller domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4679_Mixed,_incl._RNA_polymerase_sigma-70_like,_and_Beta_propeller_domain


id: CL:4680
description: Mixed, incl. RNA polymerase sigma-70 like, and Domain of unknown function DUF4179
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4680_Mixed,_incl._RNA_polymerase_sigma-70_like,_and_Domain_of_unknown_function_DUF4179


id: CL:4681
description: Mixed, incl. RNA polymerase sigma-70 like, and Domain of unknown function DUF4179
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4681_Mixed,_incl._RNA_polymerase_sigma-70_like,_and_Domain_of_unknown_function_DUF4179


id: CL:4682
description: Mixed, incl. RNA polymerase sigma-70 like, and Domain of unknown function DUF4179
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4682_Mixed,_incl._RNA_polymerase_sigma-70_like,_and_Domain_of_unknown_function_DUF4179


id: CL:4683
description: Mixed, incl. RNA polymerase sigma-70 like, and Domain of unknown function DUF4179
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4683_Mixed,_incl._RNA_polymerase_sigma-70_like,_and_Domain_of_unknown_function_DUF4179


id: CL:4684
description: Mixed, incl. RNA polymerase sigma-70 like, and Domain of unknown function DUF4179
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4684_Mixed,_incl._RNA_polymerase_sigma-70_like,_and_Domain_of_unknown_function_DUF4179


id: CL:4686
description: RNA polymerase sigma-70 like, and Domain of unknown function DUF4179
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4686_RNA_polymerase_sigma-70_like,_and_Domain_of_unknown_function_DUF4179


id: CL:4688
description: RNA polymerase sigma factor 70, ECF, conserved site, and Sigma-70, region 4
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4688_RNA_polymerase_sigma_factor_70,_ECF,_conserved_site,_and_Sigma-70,_region_4


id: CL:4714
description: Mixed, incl. Sporulation protein YtfJ, and Protein of unknown function DUF2953
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4714_Mixed,_incl._Sporulation_protein_YtfJ,_and_Protein_of_unknown_function_DUF2953


id: CL:4730
description: Mixed, incl. Cytochrome complex assembly, and Lipoprotein localisation LolA/LolB/LppX
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4730_Mixed,_incl._Cytochrome_complex_assembly,_and_Lipoprotein_localisation_LolA/LolB/LppX


id: CL:4743
description: Mixed, incl. CNNM, transmembrane domain, and RNA polymerase sigma factor 70, ECF, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4743_Mixed,_incl._CNNM,_transmembrane_domain,_and_RNA_polymerase_sigma_factor_70,_ECF,_conserved_site


id: CL:4752
description: Mixed, incl. Amidohydrolase, and Leucine-rich repeat domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4752_Mixed,_incl._Amidohydrolase,_and_Leucine-rich_repeat_domain_superfamily


id: CL:476
description: Mixed, incl. tRNA pseudouridine synthase, and RNA (guanine-N7)-methylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:476_Mixed,_incl._tRNA_pseudouridine_synthase,_and_RNA_(guanine-N7)-methylation


id: CL:4763
description: Mixed, incl. Beta propeller domain, and Protein of unknown function DUF2812
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4763_Mixed,_incl._Beta_propeller_domain,_and_Protein_of_unknown_function_DUF2812


id: CL:4765
description: Mixed, incl. Protein of unknown function DUF2812, and Trigger factor/SurA domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4765_Mixed,_incl._Protein_of_unknown_function_DUF2812,_and_Trigger_factor/SurA_domain_superfamily


id: CL:4780
description: Beta propeller domain, and Helix-turn-helix XRE-family like proteins
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4780_Beta_propeller_domain,_and_Helix-turn-helix_XRE-family_like_proteins


id: CL:4792
description: Mixed, incl. LexA-like, and SinI-like, DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4792_Mixed,_incl._LexA-like,_and_SinI-like,_DNA-binding_domain


id: CL:4805
description: Mostly uncharacterized, incl. RNA methylation, and DoxX
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4805_Mostly_uncharacterized,_incl._RNA_methylation,_and_DoxX


id: CL:4806
description: Mixed, incl. RNA methylation, and DoxX
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4806_Mixed,_incl._RNA_methylation,_and_DoxX


id: CL:4807
description: Mixed, incl. RNA methylation, and DoxX
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4807_Mixed,_incl._RNA_methylation,_and_DoxX


id: CL:4808
description: Mixed, incl. DoxX, and Aquaporin-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4808_Mixed,_incl._DoxX,_and_Aquaporin-like


id: CL:4823
description: Mixed, incl. Rv2993c-like, N-terminal, and O-methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4823_Mixed,_incl._Rv2993c-like,_N-terminal,_and_O-methyltransferase_activity


id: CL:4832
description: Mixed, incl. Cyclase activity, and FAD dependent protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4832_Mixed,_incl._Cyclase_activity,_and_FAD_dependent_protein


id: CL:4841
description: Mixed, incl. Selenotransferase activity, and HesB-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4841_Mixed,_incl._Selenotransferase_activity,_and_HesB-like_domain_superfamily


id: CL:4851
description: Mixed, incl. Phosphate ion transport, and Ppx/GppA phosphatase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4851_Mixed,_incl._Phosphate_ion_transport,_and_Ppx/GppA_phosphatase


id: CL:4852
description: Mixed, incl. Phosphate ion transport, and Ppx/GppA phosphatase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4852_Mixed,_incl._Phosphate_ion_transport,_and_Ppx/GppA_phosphatase


id: CL:4854
description: Mixed, incl. Phosphate ion transport, and Alternate to MurJ
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4854_Mixed,_incl._Phosphate_ion_transport,_and_Alternate_to_MurJ


id: CL:4857
description: Mixed, incl. Calcineurin-like phosphoesterase domain, ApaH type, and Peptidyl-serine acetylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4857_Mixed,_incl._Calcineurin-like_phosphoesterase_domain,_ApaH_type,_and_Peptidyl-serine_acetylation


id: CL:488
description: Mixed, incl. Uracil-DNA glycosylase-like, and Single-stranded DNA-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:488_Mixed,_incl._Uracil-DNA_glycosylase-like,_and_Single-stranded_DNA-binding_protein


id: CL:4893
description: Mixed, incl. Zinc ion transport, and NAD-dependent epimerase/dehydratase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4893_Mixed,_incl._Zinc_ion_transport,_and_NAD-dependent_epimerase/dehydratase


id: CL:4918
description: Phosphorelay signal transduction system, and HD-GYP domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4918_Phosphorelay_signal_transduction_system,_and_HD-GYP_domain


id: CL:4919
description: Phosphorelay signal transduction system, and HD-GYP domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4919_Phosphorelay_signal_transduction_system,_and_HD-GYP_domain


id: CL:4920
description: Phosphorelay signal transduction system, and HD-GYP domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4920_Phosphorelay_signal_transduction_system,_and_HD-GYP_domain


id: CL:4921
description: Phosphorelay signal transduction system, and HD-GYP domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4921_Phosphorelay_signal_transduction_system,_and_HD-GYP_domain


id: CL:4922
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4922_Two-component_regulatory_system,_and_Signal_transduction_histidine_kinase,_dimerisation/phosphoacceptor_domain

description:
  Two-component regulatory system, and Signal transduction histidine kinase, dimerisation/phosphoacceptor domain


id: CL:4923
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4923_Two-component_regulatory_system,_and_Signal_transduction_histidine_kinase,_dimerisation/phosphoacceptor_domain

description:
  Two-component regulatory system, and Signal transduction histidine kinase, dimerisation/phosphoacceptor domain


id: CL:4925
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4925_Two-component_regulatory_system,_and_Signal_transduction_histidine_kinase,_dimerisation/phosphoacceptor_domain

description:
  Two-component regulatory system, and Signal transduction histidine kinase, dimerisation/phosphoacceptor domain


id: CL:4927
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4927_Two-component_regulatory_system,_and_Signal_transduction_histidine_kinase,_dimerisation/phosphoacceptor_domain

description:
[cell repeats an earlier one in this file: 110 characters]


id: CL:4929
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4929_Two-component_regulatory_system,_and_Signal_transduction_histidine_kinase,_dimerisation/phosphoacceptor_domain

description:
[cell repeats an earlier one in this file: 110 characters]


id: CL:4933
description: Two-component regulatory system
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4933_Two-component_regulatory_system


id: CL:4936
description: Two-component regulatory system
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4936_Two-component_regulatory_system


id: CL:4938
description: Two-component regulatory system
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4938_Two-component_regulatory_system


id: CL:4941
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4941_OmpR/PhoB-type_DNA-binding_domain,_and_Signal_transduction_histidine_kinase,_dimerisation/phosphoacceptor_domain

description:
  OmpR/PhoB-type DNA-binding domain, and Signal transduction histidine kinase, dimerisation/phosphoacceptor domain


id: CL:4943
description: OmpR/PhoB-type DNA-binding domain, and PAS fold
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4943_OmpR/PhoB-type_DNA-binding_domain,_and_PAS_fold


id: CL:4955
description: Tll0287-like, and OmpR/PhoB-type DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4955_Tll0287-like,_and_OmpR/PhoB-type_DNA-binding_domain


id: CL:4982
description: Tll0287-like, and OmpR/PhoB-type DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:4982_Tll0287-like,_and_OmpR/PhoB-type_DNA-binding_domain


id: CL:5011
description: Mixed, incl. Sporulation transcription factor Spo0A, and PAS fold-4
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5011_Mixed,_incl._Sporulation_transcription_factor_Spo0A,_and_PAS_fold-4


id: CL:502
description: Mixed, incl. Ribosome assembly, and OBG-type guanine nucleotide-binding (G) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:502_Mixed,_incl._Ribosome_assembly,_and_OBG-type_guanine_nucleotide-binding_(G)_domain


id: CL:5052
description: Mixed, incl. ABC-2 family transporter protein, and MacB, ATP-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5052_Mixed,_incl._ABC-2_family_transporter_protein,_and_MacB,_ATP-binding_domain


id: CL:5053
description: Mixed, incl. MacB, ATP-binding domain, and FtsX-like permease family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5053_Mixed,_incl._MacB,_ATP-binding_domain,_and_FtsX-like_permease_family


id: CL:5068
description: ABC-2 family transporter protein, and Signal transduction response regulator, C-terminal effector
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5068_ABC-2_family_transporter_protein,_and_Signal_transduction_response_regulator,_C-terminal_effector


id: CL:5079
description: GGDEF domain, and HD-GYP domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5079_GGDEF_domain,_and_HD-GYP_domain


id: CL:5081
description: Mixed, incl. GGDEF domain, and PAC motif
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5081_Mixed,_incl._GGDEF_domain,_and_PAC_motif


id: CL:5088
description: Mixed, incl. EAL domain, and PAS fold-3
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5088_Mixed,_incl._EAL_domain,_and_PAS_fold-3


id: CL:5092
description: PAS fold-3, and Diguanylate cyclase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5092_PAS_fold-3,_and_Diguanylate_cyclase


id: CL:5125
description: PPM-type phosphatase-like domain, and STAS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5125_PPM-type_phosphatase-like_domain,_and_STAS_domain


id: CL:5135
description: HD-GYP domain, and Diguanylate cyclase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5135_HD-GYP_domain,_and_Diguanylate_cyclase


id: CL:5138
description: Diguanylate cyclase activity, and HD-GYP domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5138_Diguanylate_cyclase_activity,_and_HD-GYP_domain


id: CL:5171
description: P-type potassium transmembrane transporter activity, and Domain of unknown function (DUF4118)
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5171_P-type_potassium_transmembrane_transporter_activity,_and_Domain_of_unknown_function_(DUF4118)


id: CL:518
description: Mixed, incl. Protein folding, and Response to oxidative stress
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:518_Mixed,_incl._Protein_folding,_and_Response_to_oxidative_stress


id: CL:5185
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5185_Helix_turn_helix,_Lux_Regulon,_and_Signal_transduction_histidine_kinase,_subgroup_3,_dimerisation_and_phosphoacceptor_domain

description:
  Helix_turn_helix, Lux Regulon, and Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain


id: CL:5187
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5187_Signal_transduction_histidine_kinase,_subgroup_3,_dimerisation_and_phosphoacceptor_domain,_and_Helix_turn_helix,_Lux_Regulon

description:
  Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain, and Helix_turn_helix, Lux Regulon


id: CL:519
description: Mixed, incl. Unfolded protein binding, and ATPase, AAA-type, core
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:519_Mixed,_incl._Unfolded_protein_binding,_and_ATPase,_AAA-type,_core


id: CL:520
description: Mixed, incl. Unfolded protein binding, and ATPase, AAA-type, core
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:520_Mixed,_incl._Unfolded_protein_binding,_and_ATPase,_AAA-type,_core


id: CL:5208
description: Mixed, incl. Acyltransferase family, and Transcription regulator PadR, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5208_Mixed,_incl._Acyltransferase_family,_and_Transcription_regulator_PadR,_N-terminal


id: CL:5219
description: Bacterial chemotaxis, and Cilium
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5219_Bacterial_chemotaxis,_and_Cilium


id: CL:522
description: Mixed, incl. Unfolded protein binding, and Serine protease
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:522_Mixed,_incl._Unfolded_protein_binding,_and_Serine_protease


id: CL:5225
description: Transducer, and CheW-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5225_Transducer,_and_CheW-like_domain


id: CL:5230
description: Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer)., and CheW-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5230_Methyl-accepting_chemotaxis-like_domains_(chemotaxis_sensory_transducer).,_and_CheW-like_domain


id: CL:525
description: Unfolded protein binding, and ClpP, histidine active site
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:525_Unfolded_protein_binding,_and_ClpP,_histidine_active_site


id: CL:5254
description: Mixed, incl. CheW-like domain, and Protein-glutamine glutaminase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5254_Mixed,_incl._CheW-like_domain,_and_Protein-glutamine_glutaminase_activity


id: CL:5258
description: Mixed, incl. CheW-like domain, and Protein-glutamine glutaminase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5258_Mixed,_incl._CheW-like_domain,_and_Protein-glutamine_glutaminase_activity


id: CL:5260
description: CheW-like domain, and Protein-glutamine glutaminase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5260_CheW-like_domain,_and_Protein-glutamine_glutaminase_activity


id: CL:528
description: Unfolded protein binding, and ATPase regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:528_Unfolded_protein_binding,_and_ATPase_regulator_activity


id: CL:5329
description: Bacterial-type flagellum basal body, and Cell projection assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5329_Bacterial-type_flagellum_basal_body,_and_Cell_projection_assembly


id: CL:5330
description: Bacterial-type flagellum basal body, and ATP synthase alpha/beta family, beta-barrel domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5330_Bacterial-type_flagellum_basal_body,_and_ATP_synthase_alpha/beta_family,_beta-barrel_domain


id: CL:5332
description: Flagella basal body rod protein, and Cytoskeletal motor activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5332_Flagella_basal_body_rod_protein,_and_Cytoskeletal_motor_activity


id: CL:5344
description: SpoA-like superfamily, and Cytoskeletal motor activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5344_SpoA-like_superfamily,_and_Cytoskeletal_motor_activity


id: CL:5355
description: Bacterial flagellum protein export, and Cell projection assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5355_Bacterial_flagellum_protein_export,_and_Cell_projection_assembly


id: CL:5413
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5413_Mixed,_incl._YsiA-like_protein,_C-terminal_region,_and_Biosynthesis_of_siderophore_group_nonribosomal_peptides

description:
  Mixed, incl. YsiA-like protein, C-terminal region, and Biosynthesis of siderophore group nonribosomal peptides


id: CL:5422
description: Mixed, incl. ArsC family, and START-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5422_Mixed,_incl._ArsC_family,_and_START-like_domain_superfamily


id: CL:5435
description: Mostly uncharacterized, incl. Diaminopimelate epimerase, and Pyridoxamine 5-phosphate oxidase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5435_Mostly_uncharacterized,_incl._Diaminopimelate_epimerase,_and_Pyridoxamine_5-phosphate_oxidase


id: CL:5437
description: Mixed, incl. ABC-2 type transporter, and Alpha/beta hydrolase fold
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5437_Mixed,_incl._ABC-2_type_transporter,_and_Alpha/beta_hydrolase_fold


id: CL:5457
description: RNA polymerase sigma factor 54 interaction domain, and ACT domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5457_RNA_polymerase_sigma_factor_54_interaction_domain,_and_ACT_domain


id: CL:5458
description: Sigma-54 interaction domain, ATP-binding site 1, and ACT domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5458_Sigma-54_interaction_domain,_ATP-binding_site_1,_and_ACT_domain


id: CL:5460
description: Sigma-54 interaction domain, ATP-binding site 1, and Ferric-uptake regulator
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5460_Sigma-54_interaction_domain,_ATP-binding_site_1,_and_Ferric-uptake_regulator


id: CL:5463
description: Sigma-54 interaction domain, ATP-binding site 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5463_Sigma-54_interaction_domain,_ATP-binding_site_1


id: CL:5467
description: Sigma-54 interaction domain, ATP-binding site 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5467_Sigma-54_interaction_domain,_ATP-binding_site_1


id: CL:5472
description: Sigma-54 interaction domain, ATP-binding site 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5472_Sigma-54_interaction_domain,_ATP-binding_site_2


id: CL:5477
description: Mixed, incl. Propionate catabolism activator, and PAS fold-4
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5477_Mixed,_incl._Propionate_catabolism_activator,_and_PAS_fold-4


id: CL:5519
description: Mixed, incl. Acetoin catabolic process, and Sigma-54 interaction domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5519_Mixed,_incl._Acetoin_catabolic_process,_and_Sigma-54_interaction_domain


id: CL:5529
description: Mixed, incl. Negative regulation of cell division, and RRXRR domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5529_Mixed,_incl._Negative_regulation_of_cell_division,_and_RRXRR_domain


id: CL:5531
description: Mixed, incl. Flp pilus assembly protein RcpC/CpaB, and Type II secretion system (T2SS), protein F
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5531_Mixed,_incl._Flp_pilus_assembly_protein_RcpC/CpaB,_and_Type_II_secretion_system_(T2SS),_protein_F


id: CL:5557
description: Mixed, incl. Gas transport, and CheC-like family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5557_Mixed,_incl._Gas_transport,_and_CheC-like_family


id: CL:5572
description: Mixed, incl. Cyclic nucleotide-binding domain, and Reductive dehalogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5572_Mixed,_incl._Cyclic_nucleotide-binding_domain,_and_Reductive_dehalogenase


id: CL:5573
description: Cyclic nucleotide-binding domain, and Reductive dehalogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5573_Cyclic_nucleotide-binding_domain,_and_Reductive_dehalogenase


id: CL:5574
description: Cyclic nucleotide-binding domain, and Reductive dehalogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5574_Cyclic_nucleotide-binding_domain,_and_Reductive_dehalogenase


id: CL:5575
description: Cyclic nucleotide-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5575_Cyclic_nucleotide-binding_domain


id: CL:5578
description: Cyclic nucleotide-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5578_Cyclic_nucleotide-binding_domain


id: CL:5581
description: Helix_turn_helix, cAMP Regulatory protein, and Crp-like helix-turn-helix domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5581_Helix_turn_helix,_cAMP_Regulatory_protein,_and_Crp-like_helix-turn-helix_domain


id: CL:5609
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5609_Mixed,_incl._Reductive_dehalogenase,_and_Ion-translocating_oxidoreductase_complex,_subunit_RnfG/RsxG

description:
  Mixed, incl. Reductive dehalogenase, and Ion-translocating oxidoreductase complex, subunit RnfG/RsxG


id: CL:5622
description: Mixed, incl. Creatinase, N-terminal, and Ketopantoate reductase PanE/ApbA
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5622_Mixed,_incl._Creatinase,_N-terminal,_and_Ketopantoate_reductase_PanE/ApbA


id: CL:5638
description: Mixed, incl. Uncharacterized protein YczE/YyaS-like, and Cyclic nucleotide-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5638_Mixed,_incl._Uncharacterized_protein_YczE/YyaS-like,_and_Cyclic_nucleotide-binding_domain


id: CL:564
description: UVR domain, and Allosteric enzyme
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:564_UVR_domain,_and_Allosteric_enzyme


id: CL:5650
description: Threonine/Serine exporter, ThrE, and Sulfite exporter TauE/SafE
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5650_Threonine/Serine_exporter,_ThrE,_and_Sulfite_exporter_TauE/SafE


id: CL:5664
description: Mixed, incl. Cobalamin binding, and Porphyrin-containing compound biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5664_Mixed,_incl._Cobalamin_binding,_and_Porphyrin-containing_compound_biosynthetic_process


id: CL:5665
description: Mixed, incl. Cobalamin binding, and UROD/MetE-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5665_Mixed,_incl._Cobalamin_binding,_and_UROD/MetE-like_superfamily


id: CL:5666
description: Mixed, incl. Cobalamin binding, and UROD/MetE-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5666_Mixed,_incl._Cobalamin_binding,_and_UROD/MetE-like_superfamily


id: CL:5667
description: Mixed, incl. Cobalamin binding, and UROD/MetE-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5667_Mixed,_incl._Cobalamin_binding,_and_UROD/MetE-like_superfamily


id: CL:5668
description: Mixed, incl. Cobalamin binding, and UROD/MetE-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5668_Mixed,_incl._Cobalamin_binding,_and_UROD/MetE-like_superfamily


id: CL:5669
description: Mixed, incl. Cobalamin binding, and Uroporphyrinogen decarboxylase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5669_Mixed,_incl._Cobalamin_binding,_and_Uroporphyrinogen_decarboxylase_activity


id: CL:5670
description: Mixed, incl. Cobalamin binding, and Uroporphyrinogen decarboxylase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5670_Mixed,_incl._Cobalamin_binding,_and_Uroporphyrinogen_decarboxylase_activity


id: CL:5671
description: Cobalamin binding, and MttB-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5671_Cobalamin_binding,_and_MttB-like_superfamily


id: CL:5672
description: Cobalamin binding, and Uroporphyrinogen decarboxylase (URO-D)
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5672_Cobalamin_binding,_and_Uroporphyrinogen_decarboxylase_(URO-D)


id: CL:5677
description: Pterin binding enzyme, and Methionine synthase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5677_Pterin_binding_enzyme,_and_Methionine_synthase_domain


id: CL:5679
description: Pterin binding enzyme, and Methionine synthase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5679_Pterin_binding_enzyme,_and_Methionine_synthase_domain


id: CL:5718
description: Mixed, incl. Domain of unknown function DUF1638, and Methionine synthase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5718_Mixed,_incl._Domain_of_unknown_function_DUF1638,_and_Methionine_synthase_domain


id: CL:5733
description: MttB-like superfamily, and RACo linker region
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5733_MttB-like_superfamily,_and_RACo_linker_region


id: CL:5734
description: MttB-like superfamily, and RACo linker region
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5734_MttB-like_superfamily,_and_RACo_linker_region


id: CL:5743
description: Mixed, incl. BCCT transporter family, and Methyltransferase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5743_Mixed,_incl._BCCT_transporter_family,_and_Methyltransferase_complex


id: CL:5752
description: Mixed, incl. Uroporphyrinogen decarboxylase activity, and Predicted metal-binding protein (DUF2284)
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5752_Mixed,_incl._Uroporphyrinogen_decarboxylase_activity,_and_Predicted_metal-binding_protein_(DUF2284)


id: CL:5754
description: Mixed, incl. Predicted metal-binding protein (DUF2284), and Xylose isomerase-like TIM barrel
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5754_Mixed,_incl._Predicted_metal-binding_protein_(DUF2284),_and_Xylose_isomerase-like_TIM_barrel


id: CL:5775
description: Mixed, incl. Domain of unknown function DUF1638, and RACo, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5775_Mixed,_incl._Domain_of_unknown_function_DUF1638,_and_RACo,_C-terminal


id: CL:5790
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5790_Mixed,_incl._Carbon-monoxide_dehydrogenase_(acceptor)_activity,_and_Domain_of_unknown_function_DUF3786

description:
  Mixed, incl. Carbon-monoxide dehydrogenase (acceptor) activity, and Domain of unknown function DUF3786


id: CL:5793
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5793_Carbon-monoxide_dehydrogenase_(acceptor)_activity,_and_Nickel_insertion_ATPase/GTPase_(CO_dehydrogenase_maturation_factor),_CooC_type

description:
  Carbon-monoxide dehydrogenase (acceptor) activity, and Nickel insertion ATPase/GTPase (CO dehydrogenase maturation factor), CooC type


id: CL:5797
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5797_Carbon-monoxide_dehydrogenase_(acceptor)_activity,_and_CO_dehydrogenase/acetyl-CoA_synthase_delta_subunit

description:
  Carbon-monoxide dehydrogenase (acceptor) activity, and CO dehydrogenase/acetyl-CoA synthase delta subunit


id: CL:5828
description: Methyltransferase, class B, and Anaerobic coproporphyrinogen-III oxidase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5828_Methyltransferase,_class_B,_and_Anaerobic_coproporphyrinogen-III_oxidase


id: CL:5848
description: Mixed, incl. UbiC transcription regulator-associated, and Uroporphyrinogen decarboxylase (URO-D)
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5848_Mixed,_incl._UbiC_transcription_regulator-associated,_and_Uroporphyrinogen_decarboxylase_(URO-D)


id: CL:5858
description: Mixed, incl. Lysine catabolic process, and Stringent response
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5858_Mixed,_incl._Lysine_catabolic_process,_and_Stringent_response


id: CL:5872
description: Mixed, incl. Alditol metabolic process, and Uncharacterised protein family CoxE-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5872_Mixed,_incl._Alditol_metabolic_process,_and_Uncharacterised_protein_family_CoxE-like


id: CL:5873
description: Mixed, incl. Uncharacterised protein family CoxE-like, and Biosynthesis of enediyne antibiotics
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5873_Mixed,_incl._Uncharacterised_protein_family_CoxE-like,_and_Biosynthesis_of_enediyne_antibiotics


id: CL:5875
description: Mixed, incl. Uncharacterised protein family CoxE-like, and ATPase, dynein-related, AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5875_Mixed,_incl._Uncharacterised_protein_family_CoxE-like,_and_ATPase,_dynein-related,_AAA_domain


id: CL:5895
description: Mixed, incl. Biosynthesis of enediyne antibiotics, and Toluene degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5895_Mixed,_incl._Biosynthesis_of_enediyne_antibiotics,_and_Toluene_degradation


id: CL:5905
description: Alditol metabolic process, and Alkaline shock protein Asp23
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5905_Alditol_metabolic_process,_and_Alkaline_shock_protein_Asp23


id: CL:5927
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5927_Mixed,_incl._Bacterial_microcompartment,_and_Type_I_phosphodiesterase/nucleotide_pyrophosphatase/phosphate_transferase

description:
  Mixed, incl. Bacterial microcompartment, and Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase


id: CL:5929
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5929_Mixed,_incl._Bacterial_microcompartment,_and_Type_I_phosphodiesterase/nucleotide_pyrophosphatase/phosphate_transferase

description:
  Mixed, incl. Bacterial microcompartment, and Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase


id: CL:593
description: Peptidase, FtsH, and Band 7 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:593_Peptidase,_FtsH,_and_Band_7_domain


id: CL:5930
description: Mixed, incl. Bacterial microcompartment, and Sulfotransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5930_Mixed,_incl._Bacterial_microcompartment,_and_Sulfotransferase_activity


id: CL:5931
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5931_Mostly_uncharacterized,_incl._Sulfotransferase_activity,_and_Type_I_phosphodiesterase/nucleotide_pyrophosphatase/phosphate_transferase

description:
  Mostly uncharacterized, incl. Sulfotransferase activity, and Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase


id: CL:5932
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5932_Mixed,_incl._Sulfotransferase_activity,_and_Type_I_phosphodiesterase/nucleotide_pyrophosphatase/phosphate_transferase

description:
  Mixed, incl. Sulfotransferase activity, and Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase


id: CL:5933
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5933_Mixed,_incl._Sulfotransferase_activity,_and_Type_I_phosphodiesterase/nucleotide_pyrophosphatase/phosphate_transferase

description:
  Mixed, incl. Sulfotransferase activity, and Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase


id: CL:5936
description: Sulfotransferase activity, and Citrate transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5936_Sulfotransferase_activity,_and_Citrate_transporter


id: CL:5938
description: Sulfotransferase activity, and Citrate transporter-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5938_Sulfotransferase_activity,_and_Citrate_transporter-like_domain


id: CL:5964
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5964_Mixed,_incl._NOD-like_receptor_signaling_pathway,_and_Type_I_phosphodiesterase/nucleotide_pyrophosphatase/phosphate_transferase

description:
  Mixed, incl. NOD-like receptor signaling pathway, and Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase


id: CL:5977
description: Mixed, incl. DsrC like protein, and Nitrite and sulphite reductase 4Fe-4S domain containing protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5977_Mixed,_incl._DsrC_like_protein,_and_Nitrite_and_sulphite_reductase_4Fe-4S_domain_containing_protein


id: CL:5980
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5980_Mixed,_incl._Nitrite_and_sulphite_reductase_4Fe-4S_domain_containing_protein,_and_Nitrate_reductase_complex

description:
  Mixed, incl. Nitrite and sulphite reductase 4Fe-4S domain containing protein, and Nitrate reductase complex


id: CL:5981
description: Mixed, incl. Nitrite and sulphite reductase 4Fe-4S domain containing protein, and DsrC like protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5981_Mixed,_incl._Nitrite_and_sulphite_reductase_4Fe-4S_domain_containing_protein,_and_DsrC_like_protein


id: CL:5993
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:5993_Mixed,_incl._Nitrate_reductase_complex,_and_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_quinone_or_similar_compound_as_acceptor

description:
  Mixed, incl. Nitrate reductase complex, and Oxidoreductase activity, acting on CH or CH2 groups, quinone or similar compound as acceptor


id: CL:6017
description: Mixed, incl. Bacterial transferase hexapeptide (six repeats), and Dihydrofolate reductase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6017_Mixed,_incl._Bacterial_transferase_hexapeptide_(six_repeats),_and_Dihydrofolate_reductase_activity


id: CL:6019
description: Mixed, incl. Bacterial transferase hexapeptide (six repeats), and STAS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6019_Mixed,_incl._Bacterial_transferase_hexapeptide_(six_repeats),_and_STAS_domain


id: CL:604
description: Response to oxidative stress, and Disulfide oxidoreductase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:604_Response_to_oxidative_stress,_and_Disulfide_oxidoreductase_activity


id: CL:6042
description: Mixed, incl. Ethanolamine metabolic process, and EutN/Ccml superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6042_Mixed,_incl._Ethanolamine_metabolic_process,_and_EutN/Ccml_superfamily


id: CL:605
description: Reactive oxygen species metabolic process, and Thioredoxin domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:605_Reactive_oxygen_species_metabolic_process,_and_Thioredoxin_domain


id: CL:6081
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6081_Mixed,_incl._Type_I_phosphodiesterase/nucleotide_pyrophosphatase/phosphate_transferase,_and_Transcription_regulator_PadR,_N-terminal

description:
  Mixed, incl. Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase, and Transcription regulator PadR, N-terminal


id: CL:6082
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6082_Mostly_uncharacterized,_incl._LSM_domain_superfamily,_and_Nucleoside_monophosphate_catabolic_process

description:
  Mostly uncharacterized, incl. LSM domain superfamily, and Nucleoside monophosphate catabolic process


id: CL:6085
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6085_Mixed,_incl._Pyruvate,_phosphate_dikinase_activity,_and_DNA-binding_HTH_domain,_TetR-type,_conserved_site

description:
  Mixed, incl. Pyruvate, phosphate dikinase activity, and DNA-binding HTH domain, TetR-type, conserved site


id: CL:610
description: NADH:flavin oxidoreductase / NADH oxidase family, and Response to superoxide
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:610_NADH:flavin_oxidoreductase_/_NADH_oxidase_family,_and_Response_to_superoxide


id: CL:6110
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6110_Mixed,_incl._Nitrogen_utilization,_and_Type_I_phosphodiesterase/nucleotide_pyrophosphatase/phosphate_transferase

description:
  Mixed, incl. Nitrogen utilization, and Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase


id: CL:613
description: Response to superoxide, and NADH:flavin oxidoreductase / NADH oxidase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:613_Response_to_superoxide,_and_NADH:flavin_oxidoreductase_/_NADH_oxidase_family


id: CL:6131
description: Mixed, incl. Transition metal ion homeostasis, and ABC transporter, TroCD-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6131_Mixed,_incl._Transition_metal_ion_homeostasis,_and_ABC_transporter,_TroCD-like


id: CL:6132
description: Mixed, incl. Transition metal ion homeostasis, and ABC transporter, TroCD-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6132_Mixed,_incl._Transition_metal_ion_homeostasis,_and_ABC_transporter,_TroCD-like


id: CL:6133
description: Mixed, incl. ABC transporter, TroCD-like, and Ferrous iron transporter FeoA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6133_Mixed,_incl._ABC_transporter,_TroCD-like,_and_Ferrous_iron_transporter_FeoA_domain


id: CL:6135
description: Mixed, incl. ABC transporter, TroCD-like, and Adhesin B
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6135_Mixed,_incl._ABC_transporter,_TroCD-like,_and_Adhesin_B


id: CL:6138
description: Mixed, incl. ABC transporter, TroCD-like, and Adhesin B
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6138_Mixed,_incl._ABC_transporter,_TroCD-like,_and_Adhesin_B


id: CL:6140
description: ABC transporter, TroCD-like, and Adhesin B
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6140_ABC_transporter,_TroCD-like,_and_Adhesin_B


id: CL:6175
description: Mixed, incl. Ferrous iron transporter FeoA domain, and Iron ion transmembrane transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6175_Mixed,_incl._Ferrous_iron_transporter_FeoA_domain,_and_Iron_ion_transmembrane_transport


id: CL:6177
description: Ferrous iron transporter FeoA domain, and Iron ion transmembrane transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6177_Ferrous_iron_transporter_FeoA_domain,_and_Iron_ion_transmembrane_transport


id: CL:6198
description: Mixed, incl. ApbE family, and NusG, domain 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6198_Mixed,_incl._ApbE_family,_and_NusG,_domain_2


id: CL:6200
description: ApbE family, and NusG, domain 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6200_ApbE_family,_and_NusG,_domain_2


id: CL:6224
description: Mixed, incl. Methionine transport, and DNA2/NAM7 helicase-like, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6224_Mixed,_incl._Methionine_transport,_and_DNA2/NAM7_helicase-like,_C-terminal


id: CL:6246
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6246_Mostly_uncharacterized,_incl._Putative_DNA-binding_domain_superfamily,_and_Bacterial_regulatory_proteins,_tetR_family

description:
  Mostly uncharacterized, incl. Putative DNA-binding domain superfamily, and Bacterial regulatory proteins, tetR family


id: CL:6247
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6247_Mixed,_incl._Putative_DNA-binding_domain_superfamily,_and_Bacterial_regulatory_proteins,_tetR_family

description:
  Mixed, incl. Putative DNA-binding domain superfamily, and Bacterial regulatory proteins, tetR family


id: CL:6248
description: Mixed, incl. Helix_turn_helix, mercury resistance, and Bacterial regulatory proteins, tetR family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6248_Mixed,_incl._Helix_turn_helix,_mercury_resistance,_and_Bacterial_regulatory_proteins,_tetR_family


id: CL:6249
description: Mixed, incl. Helix_turn_helix, mercury resistance, and YaeB-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6249_Mixed,_incl._Helix_turn_helix,_mercury_resistance,_and_YaeB-like


id: CL:6250
description: Mixed, incl. Helix_turn_helix, mercury resistance, and YaeB-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6250_Mixed,_incl._Helix_turn_helix,_mercury_resistance,_and_YaeB-like


id: CL:6251
description: Mixed, incl. Helix_turn_helix, mercury resistance, and YaeB-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6251_Mixed,_incl._Helix_turn_helix,_mercury_resistance,_and_YaeB-like


id: CL:6253
description: Mixed, incl. Helix_turn_helix, mercury resistance, and YaeB-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6253_Mixed,_incl._Helix_turn_helix,_mercury_resistance,_and_YaeB-like


id: CL:6254
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6254_Mixed,_incl._Helix_turn_helix,_mercury_resistance,_and_Bacterial_transcription_activator,_effector_binding

description:
  Mixed, incl. Helix_turn_helix, mercury resistance, and Bacterial transcription activator, effector binding


id: CL:6256
description: Mixed, incl. WYL domain, and Bacterial transcription activator, effector binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6256_Mixed,_incl._WYL_domain,_and_Bacterial_transcription_activator,_effector_binding


id: CL:6258
description: Mixed, incl. Integron-associated effector binding protein, and WYL domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6258_Mixed,_incl._Integron-associated_effector_binding_protein,_and_WYL_domain


id: CL:6260
description: Integron-associated effector binding protein, and ABC-2 type transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6260_Integron-associated_effector_binding_protein,_and_ABC-2_type_transporter


id: CL:6292
description: Helix_turn_helix, mercury resistance
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6292_Helix_turn_helix,_mercury_resistance


id: CL:6307
description: YaeB-like, and Chlorocyclohexane and chlorobenzene degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6307_YaeB-like,_and_Chlorocyclohexane_and_chlorobenzene_degradation


id: CL:6324
description: Mixed, incl. Putative TM nitroreductase, and Biosynthesis of ansamycins
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6324_Mixed,_incl._Putative_TM_nitroreductase,_and_Biosynthesis_of_ansamycins


id: CL:6340
description: Mixed, incl. Uncharacterized protein YczE/YyaS-like, and Peptidyl-serine acetylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6340_Mixed,_incl._Uncharacterized_protein_YczE/YyaS-like,_and_Peptidyl-serine_acetylation


id: CL:6351
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6351_Mixed,_incl._Glyoxalase/fosfomycin_resistance/dioxygenase_domain,_and_Antibiotic_biosynthetic_process

description:
  Mixed, incl. Glyoxalase/fosfomycin resistance/dioxygenase domain, and Antibiotic biosynthetic process


id: CL:6353
description: Mixed, incl. ATPase regulator activity, and AF2212/PG0164-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6353_Mixed,_incl._ATPase_regulator_activity,_and_AF2212/PG0164-like_superfamily


id: CL:6369
description: Mixed, incl. RelA/SpoT, and Carbon-sulfur lyase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6369_Mixed,_incl._RelA/SpoT,_and_Carbon-sulfur_lyase_activity


id: CL:638
description: Hydrogen peroxide, and Superoxide dismutase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:638_Hydrogen_peroxide,_and_Superoxide_dismutase_activity


id: CL:6385
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6385_Mixed,_incl._Tetracyclin_repressor-like,_C-terminal_domain_superfamily,_and_Alpha/beta_hydrolase_family

description:
  Mixed, incl. Tetracyclin repressor-like, C-terminal domain superfamily, and Alpha/beta hydrolase family


id: CL:6387
description: Tetracyclin repressor-like, C-terminal domain superfamily, and Serine aminopeptidase, S33
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6387_Tetracyclin_repressor-like,_C-terminal_domain_superfamily,_and_Serine_aminopeptidase,_S33


id: CL:6407
description: Mixed, incl. L-2-amino-thiazoline-4-carboxylic acid hydrolase, and Alpha/beta hydrolase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6407_Mixed,_incl._L-2-amino-thiazoline-4-carboxylic_acid_hydrolase,_and_Alpha/beta_hydrolase_family


id: CL:6421
description: Mostly uncharacterized, incl. AraC-like ligand binding domain, and Flavodoxin, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6421_Mostly_uncharacterized,_incl._AraC-like_ligand_binding_domain,_and_Flavodoxin,_conserved_site


id: CL:6422
description: Mostly uncharacterized, incl. AraC-like ligand binding domain, and Metallodipeptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6422_Mostly_uncharacterized,_incl._AraC-like_ligand_binding_domain,_and_Metallodipeptidase_activity


id: CL:6424
description: Mixed, incl. Protein of unknown function DUF2680, and Papain-like cysteine peptidase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6424_Mixed,_incl._Protein_of_unknown_function_DUF2680,_and_Papain-like_cysteine_peptidase_superfamily


id: CL:6443
description: AraC-like ligand binding domain, and Metallodipeptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6443_AraC-like_ligand_binding_domain,_and_Metallodipeptidase_activity


id: CL:6453
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6453_Mixed,_incl._Flavodoxin,_conserved_site,_and_Transcriptional_regulator_TetR,_C-terminal,_Firmicutes_type

description:
  Mixed, incl. Flavodoxin, conserved site, and Transcriptional regulator TetR, C-terminal, Firmicutes type


id: CL:6464
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6464_Mixed,_incl._Nitrogen_regulatory_protein_PII/ATP_phosphoribosyltransferase,_C-terminal,_and_UvrD-like_helicase_C-terminal_domain

description:
  Mixed, incl. Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal, and UvrD-like helicase C-terminal domain


id: CL:6465
description: Mixed, incl. Nitrogen regulatory PII-like, alpha/beta, and Protein of unknown function (DUF1538)
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6465_Mixed,_incl._Nitrogen_regulatory_PII-like,_alpha/beta,_and_Protein_of_unknown_function_(DUF1538)


id: CL:6466
description: Mixed, incl. Protein of unknown function (DUF1538), and Nitrogen regulatory PII-like, alpha/beta
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6466_Mixed,_incl._Protein_of_unknown_function_(DUF1538),_and_Nitrogen_regulatory_PII-like,_alpha/beta


id: CL:6467
description: Mixed, incl. Nitrogen regulatory PII-like, alpha/beta, and Protein of unknown function (DUF1538)
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6467_Mixed,_incl._Nitrogen_regulatory_PII-like,_alpha/beta,_and_Protein_of_unknown_function_(DUF1538)


id: CL:6480
description: Mixed, incl. Protein of unknown function (DUF1538), and Iron-dependent Transcriptional regulator
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6480_Mixed,_incl._Protein_of_unknown_function_(DUF1538),_and_Iron-dependent_Transcriptional_regulator


id: CL:6489
description: Mixed, incl. PFTB repeat, and Ferrous iron binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6489_Mixed,_incl._PFTB_repeat,_and_Ferrous_iron_binding


id: CL:6499
description: Mixed, incl. UvrD-like helicase C-terminal domain, and FAD dependent protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6499_Mixed,_incl._UvrD-like_helicase_C-terminal_domain,_and_FAD_dependent_protein


id: CL:6501
description: Mixed, incl. FAD dependent protein, and UmuC domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6501_Mixed,_incl._FAD_dependent_protein,_and_UmuC_domain


id: CL:6514
description: UvrD-like helicase C-terminal domain, and Bacterial regulatory proteins, tetR family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6514_UvrD-like_helicase_C-terminal_domain,_and_Bacterial_regulatory_proteins,_tetR_family


id: CL:6531
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6531_Mostly_uncharacterized,_incl._Helix_turn_helix_multiple_antibiotic_resistance_protein,_and_Flavoprotein-like_superfamily

description:
  Mostly uncharacterized, incl. Helix_turn_helix multiple antibiotic resistance protein, and Flavoprotein-like superfamily


id: CL:6532
description: Mostly uncharacterized, incl. Flavoprotein-like superfamily, and Mtb iron assimilation by chelation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6532_Mostly_uncharacterized,_incl._Flavoprotein-like_superfamily,_and_Mtb_iron_assimilation_by_chelation


id: CL:6533
description: Mixed, incl. Flavoprotein-like superfamily, and Mtb iron assimilation by chelation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6533_Mixed,_incl._Flavoprotein-like_superfamily,_and_Mtb_iron_assimilation_by_chelation


id: CL:6534
description: Mixed, incl. Flavoprotein-like superfamily, and Aldo/keto reductase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6534_Mixed,_incl._Flavoprotein-like_superfamily,_and_Aldo/keto_reductase_family


id: CL:6535
description: Mostly uncharacterized, incl. Flavodoxin, and Phospholipase C/D
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6535_Mostly_uncharacterized,_incl._Flavodoxin,_and_Phospholipase_C/D


id: CL:6536
description: Mixed, incl. Flavodoxin, and RibD C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6536_Mixed,_incl._Flavodoxin,_and_RibD_C-terminal_domain


id: CL:6538
description: Mixed, incl. Flavodoxin, and Unsaturated fatty acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6538_Mixed,_incl._Flavodoxin,_and_Unsaturated_fatty_acid_metabolic_process


id: CL:654
description: SelR domain, and Cytochrome C biogenesis protein transmembrane region
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:654_SelR_domain,_and_Cytochrome_C_biogenesis_protein_transmembrane_region


id: CL:6555
description: Mixed, incl. Phospholipase C/D, and Resolvase, HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6555_Mixed,_incl._Phospholipase_C/D,_and_Resolvase,_HTH_domain


id: CL:6566
description: Mixed, incl. NADPH-dependent FMN reductase, and Manganese ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6566_Mixed,_incl._NADPH-dependent_FMN_reductase,_and_Manganese_ion_transport


id: CL:6568
description: Mixed, incl. Aldo/keto reductase family, and NADPH-dependent FMN reductase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6568_Mixed,_incl._Aldo/keto_reductase_family,_and_NADPH-dependent_FMN_reductase


id: CL:6580
description: Mixed, incl. Manganese ion transport, and Protein of unknown function DUF1848
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6580_Mixed,_incl._Manganese_ion_transport,_and_Protein_of_unknown_function_DUF1848


id: CL:6589
description: Mixed, incl. Mtb iron assimilation by chelation, and RelA/SpoT
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6589_Mixed,_incl._Mtb_iron_assimilation_by_chelation,_and_RelA/SpoT


id: CL:6591
description: Mixed, incl. Cellulose binding, and Calcium ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6591_Mixed,_incl._Cellulose_binding,_and_Calcium_ion_transport


id: CL:6607
description: Mixed, incl. RelA/SpoT, and Mtb iron assimilation by chelation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6607_Mixed,_incl._RelA/SpoT,_and_Mtb_iron_assimilation_by_chelation


id: CL:6618
description: Mostly uncharacterized, incl. Small Multidrug Resistance protein, and Helix-turn-helix
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6618_Mostly_uncharacterized,_incl._Small_Multidrug_Resistance_protein,_and_Helix-turn-helix


id: CL:6619
description: Mostly uncharacterized, incl. Helix-turn-helix, and RNA ligase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6619_Mostly_uncharacterized,_incl._Helix-turn-helix,_and_RNA_ligase_activity


id: CL:6621
description: Mixed, incl. RNA ligase activity, and ABC-2 membrane transporter-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6621_Mixed,_incl._RNA_ligase_activity,_and_ABC-2_membrane_transporter-like


id: CL:6633
description: Mixed, incl. Crp-like helix-turn-helix domain, and 4Fe-4S binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6633_Mixed,_incl._Crp-like_helix-turn-helix_domain,_and_4Fe-4S_binding_domain


id: CL:6644
description: Mixed, incl. Small Multidrug Resistance protein, and Response to nitrosative stress
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6644_Mixed,_incl._Small_Multidrug_Resistance_protein,_and_Response_to_nitrosative_stress


id: CL:665
description: Mixed, incl. Pentose phosphate pathway, and Glycolysis / Gluconeogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:665_Mixed,_incl._Pentose_phosphate_pathway,_and_Glycolysis_/_Gluconeogenesis


id: CL:6656
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6656_Mixed,_incl._Helix_turn_helix_multiple_antibiotic_resistance_protein,_and_Tetracycline_resistance_protein_TetA/multidrug_resistance_protein_MdtG

description:
  Mixed, incl. Helix_turn_helix multiple antibiotic resistance protein, and Tetracycline resistance protein TetA/multidrug resistance protein MdtG


id: CL:6657
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6657_Mixed,_incl._Helix_turn_helix_multiple_antibiotic_resistance_protein,_and_Tetracycline_resistance_protein_TetA/multidrug_resistance_protein_MdtG

description:
  Mixed, incl. Helix_turn_helix multiple antibiotic resistance protein, and Tetracycline resistance protein TetA/multidrug resistance protein MdtG


id: CL:6658
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6658_Helix_turn_helix_multiple_antibiotic_resistance_protein,_and_Tetracycline_resistance_protein_TetA/multidrug_resistance_protein_MdtG

description:
  Helix_turn_helix multiple antibiotic resistance protein, and Tetracycline resistance protein TetA/multidrug resistance protein MdtG


id: CL:6661
description: Helix_turn_helix multiple antibiotic resistance protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6661_Helix_turn_helix_multiple_antibiotic_resistance_protein


id: CL:667
description: Mixed, incl. Pentose phosphate pathway, and Glycolytic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:667_Mixed,_incl._Pentose_phosphate_pathway,_and_Glycolytic_process


id: CL:6681
description: Mixed, incl. Protein of unknown function DUF6530, and Bile acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6681_Mixed,_incl._Protein_of_unknown_function_DUF6530,_and_Bile_acid_metabolic_process


id: CL:669
description: Glycolysis, and Pentose phosphate pathway
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:669_Glycolysis,_and_Pentose_phosphate_pathway


id: CL:6697
description: Multi antimicrobial extrusion protein, and Transcriptional regulator MarR-type, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6697_Multi_antimicrobial_extrusion_protein,_and_Transcriptional_regulator_MarR-type,_conserved_site


id: CL:671
description: Glycolysis, and Glyceraldehyde-3-phosphate dehydrogenase, type I
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:671_Glycolysis,_and_Glyceraldehyde-3-phosphate_dehydrogenase,_type_I


id: CL:6718
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6718_Mostly_uncharacterized,_incl._HDOD_domain,_and_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen,_incorporation_of_two_atoms_of_oxygen

description:
  Mostly uncharacterized, incl. HDOD domain, and Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen


id: CL:6719
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6719_Mostly_uncharacterized,_incl._HDOD_domain,_and_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen,_incorporation_of_two_atoms_of_oxygen

description:
  Mostly uncharacterized, incl. HDOD domain, and Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen


id: CL:672
description: Glycolysis, and Sugar-phosphatase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:672_Glycolysis,_and_Sugar-phosphatase_activity


id: CL:6720
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6720_Mixed,_incl._Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen,_incorporation_of_two_atoms_of_oxygen,_and_Calcium_ion_transport

description:
  Mixed, incl. Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen, and Calcium ion transport


id: CL:6722
description: Mixed, incl. Calcium ion transport, and Suppression of autophagy
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6722_Mixed,_incl._Calcium_ion_transport,_and_Suppression_of_autophagy


id: CL:6743
description: Mixed, incl. HDOD domain, and Serine aminopeptidase, S33
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6743_Mixed,_incl._HDOD_domain,_and_Serine_aminopeptidase,_S33


id: CL:6744
description: Mixed, incl. Serine aminopeptidase, S33, and Putative TM nitroreductase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6744_Mixed,_incl._Serine_aminopeptidase,_S33,_and_Putative_TM_nitroreductase


id: CL:6764
description: Mostly uncharacterized, incl. ArsC family, and Monooxygenase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6764_Mostly_uncharacterized,_incl._ArsC_family,_and_Monooxygenase


id: CL:6766
description: Mixed, incl. Monooxygenase, and Methyltransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6766_Mixed,_incl._Monooxygenase,_and_Methyltransferase_domain


id: CL:6776
description: Mixed, incl. ArsC family, and NADPH dehydrogenase (quinone) activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6776_Mixed,_incl._ArsC_family,_and_NADPH_dehydrogenase_(quinone)_activity


id: CL:6788
description: Mixed, incl. Peptidase M42, and Regulation of RNA stability
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6788_Mixed,_incl._Peptidase_M42,_and_Regulation_of_RNA_stability


id: CL:6789
description: Peptidase M42, and Transcription regulator HTH-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6789_Peptidase_M42,_and_Transcription_regulator_HTH-like


id: CL:6798
description: Mixed, incl. Regulation of RNA stability, and Carboxymuconolactone decarboxylase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6798_Mixed,_incl._Regulation_of_RNA_stability,_and_Carboxymuconolactone_decarboxylase-like


id: CL:6814
description: Mixed, incl. 6-O-methylguanine DNA methyltransferase, DNA binding domain, and DNA glycosylase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6814_Mixed,_incl._6-O-methylguanine_DNA_methyltransferase,_DNA_binding_domain,_and_DNA_glycosylase


id: CL:6815
description: Mixed, incl. 6-O-methylguanine DNA methyltransferase, DNA binding domain, and DNA glycosylase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6815_Mixed,_incl._6-O-methylguanine_DNA_methyltransferase,_DNA_binding_domain,_and_DNA_glycosylase


id: CL:6816
description: 6-O-methylguanine DNA methyltransferase, DNA binding domain, and Metal binding domain of Ada
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6816_6-O-methylguanine_DNA_methyltransferase,_DNA_binding_domain,_and_Metal_binding_domain_of_Ada


id: CL:6831
description: Mixed, incl. Heparin binding, and ABC1 atypical kinase-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6831_Mixed,_incl._Heparin_binding,_and_ABC1_atypical_kinase-like_domain


id: CL:6840
description: Mixed, incl. Universal stress protein A family, and HTH domain, IS21 transposase-type
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6840_Mixed,_incl._Universal_stress_protein_A_family,_and_HTH_domain,_IS21_transposase-type


id: CL:6841
description: Universal stress protein A family, and HTH domain, IS21 transposase-type
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6841_Universal_stress_protein_A_family,_and_HTH_domain,_IS21_transposase-type


id: CL:685
description: Glycolysis, and Glyceraldehyde-3-phosphate dehydrogenase, type I
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:685_Glycolysis,_and_Glyceraldehyde-3-phosphate_dehydrogenase,_type_I


id: CL:6850
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6850_Mixed,_incl._Rhodanese_Homology_Domain,_and_Type_I_phosphodiesterase/nucleotide_pyrophosphatase/phosphate_transferase

description:
  Mixed, incl. Rhodanese Homology Domain, and Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase


id: CL:6859
description: Mostly uncharacterized, incl. Peptidyl-serine acetylation, and Methyltransferase domain 25
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6859_Mostly_uncharacterized,_incl._Peptidyl-serine_acetylation,_and_Methyltransferase_domain_25


id: CL:6860
description: Mostly uncharacterized, incl. Peptidyl-serine acetylation, and Phosphotransferase enzyme family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6860_Mostly_uncharacterized,_incl._Peptidyl-serine_acetylation,_and_Phosphotransferase_enzyme_family


id: CL:6861
description: Mixed, incl. Peptidyl-serine acetylation, and Phosphotransferase enzyme family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6861_Mixed,_incl._Peptidyl-serine_acetylation,_and_Phosphotransferase_enzyme_family


id: CL:6863
description: Mixed, incl. Peptidyl-serine acetylation, and ubiE/COQ5 methyltransferase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6863_Mixed,_incl._Peptidyl-serine_acetylation,_and_ubiE/COQ5_methyltransferase_family


id: CL:6867
description: Peptidyl-serine acetylation, and Phosphotransferase enzyme family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6867_Peptidyl-serine_acetylation,_and_Phosphotransferase_enzyme_family


id: CL:6879
description: Mixed, incl. ubiE/COQ5 methyltransferase family, and Methyltransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6879_Mixed,_incl._ubiE/COQ5_methyltransferase_family,_and_Methyltransferase_domain


id: CL:6897
description: Mixed, incl. Conserved hypothetical protein CHP04076, and Protein of unknown function DUF2922
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6897_Mixed,_incl._Conserved_hypothetical_protein_CHP04076,_and_Protein_of_unknown_function_DUF2922


id: CL:6908
description: Mostly uncharacterized, incl. Peptidase C39-like, and Arginine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6908_Mostly_uncharacterized,_incl._Peptidase_C39-like,_and_Arginine_biosynthesis


id: CL:6911
description: Mixed, incl. Peptidase C39-like, and 4Fe-4S binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6911_Mixed,_incl._Peptidase_C39-like,_and_4Fe-4S_binding_domain


id: CL:6932
description: Mixed, incl. Formamide metabolic process, and Methyltransferase small domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6932_Mixed,_incl._Formamide_metabolic_process,_and_Methyltransferase_small_domain


id: CL:6948
description: Mixed, incl. Response to virus, and GNAT domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6948_Mixed,_incl._Response_to_virus,_and_GNAT_domain


id: CL:6949
description: Mixed, incl. Response to virus, and GNAT domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6949_Mixed,_incl._Response_to_virus,_and_GNAT_domain


id: CL:6950
description: Mixed, incl. Response to virus, and Acetyltransferase (GNAT) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6950_Mixed,_incl._Response_to_virus,_and_Acetyltransferase_(GNAT)_domain


id: CL:6951
description: Mixed, incl. Response to virus, and Acetyltransferase (GNAT) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6951_Mixed,_incl._Response_to_virus,_and_Acetyltransferase_(GNAT)_domain


id: CL:6952
description: Mixed, incl. Response to virus, and Acetyltransferase (GNAT) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6952_Mixed,_incl._Response_to_virus,_and_Acetyltransferase_(GNAT)_domain


id: CL:6954
description: Mixed, incl. Response to virus, and Sigma-54 interaction domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6954_Mixed,_incl._Response_to_virus,_and_Sigma-54_interaction_domain


id: CL:6955
description: Mixed, incl. Response to virus, and Sigma-54 interaction domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6955_Mixed,_incl._Response_to_virus,_and_Sigma-54_interaction_domain


id: CL:6956
description: Mostly uncharacterized, incl. Sigma-54 interaction domain, and Regulation of ATP-dependent activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6956_Mostly_uncharacterized,_incl._Sigma-54_interaction_domain,_and_Regulation_of_ATP-dependent_activity


id: CL:6958
description: Mixed, incl. RNA helicase activity, and Transcription regulators MarR/SlyA-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6958_Mixed,_incl._RNA_helicase_activity,_and_Transcription_regulators_MarR/SlyA-like


id: CL:6978
description: RAMP superfamily, and Response to virus
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6978_RAMP_superfamily,_and_Response_to_virus


id: CL:6990
description: Mixed, incl. Protein of unknown function DUF2975, and YibE/F-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:6990_Mixed,_incl._Protein_of_unknown_function_DUF2975,_and_YibE/F-like


id: CL:7013
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:7013_Mixed,_incl._Glucosamine_6-phosphate_N-acetyltransferase_activity,_and_Negative_regulation_of_sporulation

description:
  Mixed, incl. Glucosamine 6-phosphate N-acetyltransferase activity, and Negative regulation of sporulation


id: CL:7032
description: Mixed, incl. RRXRR domain, and Ribbon-helix-helix protein, CopG
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:7032_Mixed,_incl._RRXRR_domain,_and_Ribbon-helix-helix_protein,_CopG


id: CL:7045
description: Maintenance of DNA repeat elements, and Response to virus
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:7045_Maintenance_of_DNA_repeat_elements,_and_Response_to_virus


id: CL:7047
description: Antiviral defense, and CRISPR-associated Cas3-type HD domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:7047_Antiviral_defense,_and_CRISPR-associated_Cas3-type_HD_domain


id: CL:7062
description: Maintenance of DNA repeat elements, and CRISPR-associated protein Cas4
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:7062_Maintenance_of_DNA_repeat_elements,_and_CRISPR-associated_protein_Cas4


id: CL:7075
description: Mixed, incl. Acetyltransferase (GNAT) family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:7075_Mixed,_incl._Acetyltransferase_(GNAT)_family


id: CL:7084
description: Mixed, incl. NodB homology domain, and Glyco_18
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:7084_Mixed,_incl._NodB_homology_domain,_and_Glyco_18


id: CL:7086
description: Mixed, incl. Von Willebrand factor (vWF) type A domain, and Lipopolysaccharide biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:7086_Mixed,_incl._Von_Willebrand_factor_(vWF)_type_A_domain,_and_Lipopolysaccharide_biosynthesis


id: CL:7099
description: Mixed, incl. Glyco_18, and Xylanase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:7099_Mixed,_incl._Glyco_18,_and_Xylanase_activity


id: CL:7113
description: Mixed, incl. ABC3 transporter permease protein domain, and MacB, ATP-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:7113_Mixed,_incl._ABC3_transporter_permease_protein_domain,_and_MacB,_ATP-binding_domain


id: CL:7114
description: Mixed, incl. ABC3 transporter permease protein domain, and MacB, ATP-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:7114_Mixed,_incl._ABC3_transporter_permease_protein_domain,_and_MacB,_ATP-binding_domain


id: CL:7115
description: Mixed, incl. ABC3 transporter permease protein domain, and MacB, ATP-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:7115_Mixed,_incl._ABC3_transporter_permease_protein_domain,_and_MacB,_ATP-binding_domain


id: CL:7116
description: Mixed, incl. ABC3 transporter permease protein domain, and MacB, ATP-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:7116_Mixed,_incl._ABC3_transporter_permease_protein_domain,_and_MacB,_ATP-binding_domain


id: CL:7118
description: Mixed, incl. FtsX-like permease family, and HlyD family secretion protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:7118_Mixed,_incl._FtsX-like_permease_family,_and_HlyD_family_secretion_protein


id: CL:7119
description: Mixed, incl. HlyD family secretion protein, and FtsX-like permease family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:7119_Mixed,_incl._HlyD_family_secretion_protein,_and_FtsX-like_permease_family


id: CL:7121
description: Mixed, incl. FtsX-like permease family, and Biotin-lipoyl like
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:7121_Mixed,_incl._FtsX-like_permease_family,_and_Biotin-lipoyl_like


id: CL:7122
description: FtsX-like permease family, and MacB, ATP-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:7122_FtsX-like_permease_family,_and_MacB,_ATP-binding_domain


id: CL:7124
description: FtsX-like permease family, and MacB, ATP-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:7124_FtsX-like_permease_family,_and_MacB,_ATP-binding_domain


id: CL:7126
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:7126_Mixed,_incl._ABC_transporter,_lipoprotein_release,_LolD-like,_and_Membrane_fusion_protein,_biotin-lipoyl_like_domain

description:
  Mixed, incl. ABC transporter, lipoprotein release, LolD-like, and Membrane fusion protein, biotin-lipoyl like domain


id: CL:713
description: Mixed, incl. UMP salvage, and Pyrimidine nucleoside metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:713_Mixed,_incl._UMP_salvage,_and_Pyrimidine_nucleoside_metabolic_process


id: CL:715
description: Pyrimidine nucleoside metabolic process, and Phosphopentomutase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:715_Pyrimidine_nucleoside_metabolic_process,_and_Phosphopentomutase


id: CL:7160
description: Outer membrane efflux protein, and RND efflux pump, membrane fusion protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:7160_Outer_membrane_efflux_protein,_and_RND_efflux_pump,_membrane_fusion_protein


id: CL:7161
description: MMPL family, and Outer membrane efflux protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:7161_MMPL_family,_and_Outer_membrane_efflux_protein


id: CL:7172
description: Outer membrane efflux protein, and Antibiotic resistance
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:7172_Outer_membrane_efflux_protein,_and_Antibiotic_resistance


id: CL:7198
description: Mixed, incl. Membrane component of ABC transporter, predicted, and MacB, ATP-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:7198_Mixed,_incl._Membrane_component_of_ABC_transporter,_predicted,_and_MacB,_ATP-binding_domain


id: CL:7219
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:7219_Mixed,_incl._Membrane_component_of_ABC_transporter,_predicted,_and_AAA_domain,_putative_AbiEii_toxin,_Type_IV_TA_system

description:
  Mixed, incl. Membrane component of ABC transporter, predicted, and AAA domain, putative AbiEii toxin, Type IV TA system


id: CL:7232
description: Mixed, incl. Protein of unknown function DUF4418, and Cytochrome c-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:7232_Mixed,_incl._Protein_of_unknown_function_DUF4418,_and_Cytochrome_c-like_domain_superfamily


id: CL:7242
description: Mixed, incl. HxlR-like helix-turn-helix, and GyrI-like small molecule binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:7242_Mixed,_incl._HxlR-like_helix-turn-helix,_and_GyrI-like_small_molecule_binding_domain


id: CL:7257
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:7257_Mostly_uncharacterized,_incl._Bacterial_extracellular_solute-binding_protein,_and_Molybdate/tungstate_binding,_C-terminal

description:
  Mostly uncharacterized, incl. Bacterial extracellular solute-binding protein, and Molybdate/tungstate binding, C-terminal


id: CL:7259
description: Mostly uncharacterized, incl. MalK, OB fold domain, and Capsule organization
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:7259_Mostly_uncharacterized,_incl._MalK,_OB_fold_domain,_and_Capsule_organization


id: CL:7261
description: Mixed, incl. MalK, OB fold domain, and ABC-type maltose transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:7261_Mixed,_incl._MalK,_OB_fold_domain,_and_ABC-type_maltose_transporter_activity


id: CL:7262
description: Mixed, incl. MalK, OB fold domain, and ABC-type maltose transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:7262_Mixed,_incl._MalK,_OB_fold_domain,_and_ABC-type_maltose_transporter_activity


id: CL:7273
description: Mixed, incl. TOBE domain, and ABC-type maltose transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:7273_Mixed,_incl._TOBE_domain,_and_ABC-type_maltose_transporter_activity


id: CL:7290
description: Capsule organization, and Poly-gamma-glutamate hydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:7290_Capsule_organization,_and_Poly-gamma-glutamate_hydrolase


id: CL:7310
description: Polyamine transport, and ABC-type polyamine transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:7310_Polyamine_transport,_and_ABC-type_polyamine_transporter_activity


id: CL:7324
description: Mixed, incl. Sulfur metabolism, and Biotin metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:7324_Mixed,_incl._Sulfur_metabolism,_and_Biotin_metabolic_process


id: CL:7326
description: SsuA/THI5-like, and Sulfur metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:7326_SsuA/THI5-like,_and_Sulfur_metabolism


id: CL:7327
description: NMT1/THI5 like, and Sulfur metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:7327_NMT1/THI5_like,_and_Sulfur_metabolism


id: CL:7329
description: NMT1/THI5 like, and Sulfur metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:7329_NMT1/THI5_like,_and_Sulfur_metabolism


id: CL:7331
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:7331_Mixed,_incl._NMT1/THI5_like,_and_Binding-protein-dependent_transport_system_inner_membrane_component

description:
  Mixed, incl. NMT1/THI5 like, and Binding-protein-dependent transport system inner membrane component


id: CL:7333
description: NMT1/THI5 like, and Binding-protein-dependent transport system inner membrane component
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:7333_NMT1/THI5_like,_and_Binding-protein-dependent_transport_system_inner_membrane_component


id: CL:7335
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:7335_Mixed,_incl._NMT1/THI5_like,_and_Binding-protein-dependent_transport_system_inner_membrane_component

description:
  Mixed, incl. NMT1/THI5 like, and Binding-protein-dependent transport system inner membrane component


id: CL:7337
description: NMT1/THI5 like, and Binding-protein-dependent transport system inner membrane component
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:7337_NMT1/THI5_like,_and_Binding-protein-dependent_transport_system_inner_membrane_component


id: CL:737
description: Mixed, incl. RF-1 domain, and Telomere recombination
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:737_Mixed,_incl._RF-1_domain,_and_Telomere_recombination


id: CL:7397
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:7397_ABC-type_uncharacterised_transport_system,_substrate-binding_component,_TM0202_type,_and_RmlC-like_cupin_domain_superfamily

description:
  ABC-type uncharacterised transport system, substrate-binding component, TM0202 type, and RmlC-like cupin domain superfamily


id: CL:7406
description: Mixed, incl. NMT1-like family, and Hydrogenase maturation factor HypB
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:7406_Mixed,_incl._NMT1-like_family,_and_Hydrogenase_maturation_factor_HypB


id: CL:7420
description: Mixed, incl. Biotin metabolic process, and Transmembrane protein TMEM64
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:7420_Mixed,_incl._Biotin_metabolic_process,_and_Transmembrane_protein_TMEM64


id: CL:7421
description: Mixed, incl. Biotin metabolic process, and Transmembrane protein TMEM64
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:7421_Mixed,_incl._Biotin_metabolic_process,_and_Transmembrane_protein_TMEM64


id: CL:7422
description: Mixed, incl. Biotin metabolic process, and CobW/HypB/UreG, nucleotide-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121395_STRINGid_CL:7422_Mixed,_incl._Biotin_metabolic_process,_and_CobW/HypB/UreG,_nucleotide-binding_domain


