# geneInfo

ensembl_gene_id: LSHA_0007
symbol: nhaA
gene_biotype: protein_coding
description:
  pH-dependent sodium/proton antiporter; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family.


ensembl_gene_id: LSHA_0015
symbol: psuG
gene_biotype: protein_coding
description:
  Indigoidine synthase A-like protein involved in pigment biosynthesis; Catalyzes the reversible cleavage of pseudouridine 5'- phosphate (PsiMP) to ribose 5-phosphate and uracil. Functions biologically in the cleavage direction, as part of a pseudouridine degradation pathway; Belongs to the pseudouridine-5'-phosphate glycosidase family.


ensembl_gene_id: LSHA_0016
symbol: yggX
gene_biotype: protein_coding
description:
  Protein that protects iron-sulfur proteins against oxidative damage; Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes.


ensembl_gene_id: LSHA_0025
symbol: serS
gene_biotype: protein_coding
description:
  seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).


ensembl_gene_id: LSHA_0026
symbol: crcB
gene_biotype: protein_coding
description:
  Camphor resistance protein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.


ensembl_gene_id: LSHA_0027
symbol: lpxA_1
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: LSHA_0028
symbol: fabZ
gene_biotype: protein_coding
description:
  (3R)-hydroxymyristoyl-ACP dehydratase; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.


ensembl_gene_id: LSHA_0031
symbol: bamA
gene_biotype: protein_coding
description:
  Outer membrane protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.


ensembl_gene_id: LSHA_0034
symbol: uppS
gene_biotype: protein_coding
description:
  UDP pyrophosphate synthetase; Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with (2E,6E)-farnesyl diphosphate (E,E-FPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30Z,34E,38E)-undecaprenyl diphosphate (di- trans,octa-cis-UPP). UPP is the precursor of glycosyl carrier lipid in the biosynthesis of bacterial cell wall polysaccharide components such as peptidoglycan and lipopolysaccharide.


ensembl_gene_id: LSHA_0042
symbol: purA
gene_biotype: protein_coding
description:
  Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.


ensembl_gene_id: LSHA_0046
symbol: trmB
gene_biotype: protein_coding
description:
  tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.


ensembl_gene_id: LSHA_0049
symbol: rpoN
gene_biotype: protein_coding
description:
  RNA polymerase factor sigma-54; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: LSHA_0052
symbol: Lsha_0052
gene_biotype: protein_coding
description:
  CDP-diacylglycerol-serine-O- phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: LSHA_0062
symbol: aroQ
gene_biotype: protein_coding
description:
  3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.


ensembl_gene_id: LSHA_0063
symbol: accB
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: LSHA_0064
symbol: Lsha_0064
gene_biotype: protein_coding
description:
  Acetyl CoA carboxylase, biotin carboxylase subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: LSHA_0065
symbol: prmA
gene_biotype: protein_coding
description:
  Ribosomal protein L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family.


ensembl_gene_id: LSHA_0076
symbol: uvrA
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.


ensembl_gene_id: LSHA_0081
symbol: folB
gene_biotype: protein_coding
description:
  Dihydroneopterin aldolase FolB; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.


ensembl_gene_id: LSHA_0083
symbol: hemE
gene_biotype: protein_coding
description:
  Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.


ensembl_gene_id: LSHA_0087
symbol: grpE
gene_biotype: protein_coding
description:
  Heat shock protein GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP- [...]


ensembl_gene_id: LSHA_0089
symbol: dnaJ_1
gene_biotype: protein_coding
description:
  Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...]


ensembl_gene_id: LSHA_0091
symbol: metK
gene_biotype: protein_coding
description:
  S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.


ensembl_gene_id: LSHA_0092
symbol: sahH
gene_biotype: protein_coding
description:
  S-adenosyl-L-homocysteine hydrolase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.


ensembl_gene_id: LSHA_0099
symbol: proC
gene_biotype: protein_coding
description:
  Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.


ensembl_gene_id: LSHA_0100
symbol: Lsha_0100
gene_biotype: protein_coding
description:
  Pyridoxal-5'-phosphate dependent enzyme family transporter protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.


ensembl_gene_id: LSHA_0102
symbol: rph
gene_biotype: protein_coding
description:
  Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation.


ensembl_gene_id: LSHA_0105
symbol: rpoZ
gene_biotype: protein_coding
description:
  RNA polymerase omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.


ensembl_gene_id: LSHA_0106
symbol: spoT
gene_biotype: protein_coding
description:
  Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.


ensembl_gene_id: LSHA_0111
symbol: queA
gene_biotype: protein_coding
description:
  S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).


ensembl_gene_id: LSHA_0114
symbol: yajC
gene_biotype: protein_coding
description:
  SecYEG protein translocase auxillary subunit; The SecYEG-SecDF-YajC-YidC holo-translocon (HTL) protein secretase/insertase is a supercomplex required for protein secretion, insertion of proteins into membranes, and assembly of membrane protein complexes. While the SecYEG complex is essential for assembly of a number of proteins and complexes, the SecDF-YajC-YidC subcomplex facilitates these functions.


ensembl_gene_id: LSHA_0115
symbol: secD
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: LSHA_0116
symbol: secF
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: LSHA_0121
symbol: Lsha_0121
gene_biotype: protein_coding
description:
  Pyruvate dehydrogenase E1 component oxidoreductase protein AceE; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).


ensembl_gene_id: LSHA_0122
symbol: Lsha_0122
gene_biotype: protein_coding
description:
  Pyruvate dehydrogenase E2 component; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).


ensembl_gene_id: LSHA_0153
symbol: sufS
gene_biotype: protein_coding
description:
  Selenocysteine lyase, PLP-dependent; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.


ensembl_gene_id: LSHA_0160
symbol: ubiX
gene_biotype: protein_coding
description:
  3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.


ensembl_gene_id: LSHA_0165
symbol: Lsha_0165
gene_biotype: protein_coding
description:
  Bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.


ensembl_gene_id: LSHA_0166
symbol: dut
gene_biotype: protein_coding
description:
  Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family.


ensembl_gene_id: LSHA_0171
symbol: Lsha_0171
gene_biotype: protein_coding
description:
  Deoxyribonucleotide triphosphate pyrophosphatase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.


ensembl_gene_id: LSHA_0204
symbol: Lsha_0204
gene_biotype: protein_coding
description:
  Carboxymuconolactone decarboxylase family transporter; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.


ensembl_gene_id: LSHA_0211
symbol: cyoE
gene_biotype: protein_coding
description:
  Polyprenyltransferase (cytochrome oxidase assembly factor); Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.


ensembl_gene_id: LSHA_0215
symbol: zwf
gene_biotype: protein_coding
description:
  Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.


ensembl_gene_id: LSHA_0217
symbol: edd
gene_biotype: protein_coding
description:
  Phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family.


ensembl_gene_id: LSHA_0220
symbol: ywtG
gene_biotype: protein_coding
description:
  D-xylose proton symporter; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.


ensembl_gene_id: LSHA_0222
symbol: hemH
gene_biotype: protein_coding
description:
  Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.


ensembl_gene_id: LSHA_0233
symbol: Lsha_0233
gene_biotype: protein_coding
description:
  Sodium:dicarboxylate symporter protein; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: LSHA_0234
symbol: valS
gene_biotype: protein_coding
description:
  valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.


ensembl_gene_id: LSHA_0235
symbol: Lsha_0235
gene_biotype: protein_coding
description:
  Multidrug efflux transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: LSHA_0240
symbol: glyA
gene_biotype: protein_coding
description:
  Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.


ensembl_gene_id: LSHA_0241
symbol: nrdR
gene_biotype: protein_coding
description:
  NrdR family transcriptional regulator; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family.


ensembl_gene_id: LSHA_0242
symbol: nusB
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.


ensembl_gene_id: LSHA_0243
symbol: pgpA
gene_biotype: protein_coding
description:
  Phosphatidylglycerophosphatase A; Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG).


ensembl_gene_id: LSHA_0248
symbol: nadE
gene_biotype: protein_coding
description:
  Glutamine dependent NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.


ensembl_gene_id: LSHA_0250
symbol: hisC-2
gene_biotype: protein_coding
description:
  Histidinol phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.


ensembl_gene_id: LSHA_0257
symbol: mltA_1
gene_biotype: protein_coding
description:
  Membrane-bound lytic murein transglycosylase; Murein-degrading enzyme. May play a role in recycling of muropeptides during cell elongation and/or cell division.


ensembl_gene_id: LSHA_0267
symbol: lolB
gene_biotype: protein_coding
description:
  Outer membrane lipoprotein LolB; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein.


ensembl_gene_id: LSHA_0268
symbol: coaD
gene_biotype: protein_coding
description:
  Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.


ensembl_gene_id: LSHA_0272
symbol: mutM
gene_biotype: protein_coding
description:
  formamidopyrimidine-DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates.


ensembl_gene_id: LSHA_0282
symbol: queF
gene_biotype: protein_coding
description:
  GTP cyclohydrolase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1).


ensembl_gene_id: LSHA_0294
symbol: pfp
gene_biotype: protein_coding
description:
  6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP- PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions.


ensembl_gene_id: LSHA_0296
symbol: gltX
gene_biotype: protein_coding
description:
  glutamyl-tRNA synthetase, catalytic subunit; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.


ensembl_gene_id: LSHA_0313
symbol: kefC_2
gene_biotype: protein_coding
description:
  Glutathione-regulated potassium efflux system; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.


ensembl_gene_id: LSHA_0319
symbol: mdtB
gene_biotype: protein_coding
description:
  Multidrug efflux system, subunit B; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: LSHA_0320
symbol: mdtC
gene_biotype: protein_coding
description:
  Multidrug efflux system, subunit C; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: LSHA_0350
symbol: lepA
gene_biotype: protein_coding
description:
  GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.


ensembl_gene_id: LSHA_0353
symbol: rnc
gene_biotype: protein_coding
description:
  Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.


ensembl_gene_id: LSHA_0357
symbol: tig
gene_biotype: protein_coding
description:
  Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.


ensembl_gene_id: LSHA_0358
symbol: clpP
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: LSHA_0359
symbol: clpX
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease, ATP binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.


ensembl_gene_id: LSHA_0360
symbol: lon
gene_biotype: protein_coding
description:
  ATP-dependent protease La; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.


ensembl_gene_id: LSHA_0361
symbol: Lsha_0361
gene_biotype: protein_coding
description:
  HupB DNA binding protein HU-beta; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.


ensembl_gene_id: LSHA_0375
symbol: dtd
gene_biotype: protein_coding
description:
  D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family.


ensembl_gene_id: LSHA_0382
symbol: rsmJ
gene_biotype: protein_coding
description:
  SAM-dependent methyltransferase; Specifically methylates the guanosine in position 1516 of 16S rRNA.


ensembl_gene_id: LSHA_0387
symbol: metN
gene_biotype: protein_coding
description:
  Methionine import ATP-binding protein MetN; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.


ensembl_gene_id: LSHA_0397
symbol: pyrD
gene_biotype: protein_coding
description:
  Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.


ensembl_gene_id: LSHA_0400
symbol: msbA
gene_biotype: protein_coding
description:
  ABC transporter, ATP binding/permease protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation.


ensembl_gene_id: LSHA_0401
symbol: lpxK_1
gene_biotype: protein_coding
description:
  Tetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).


ensembl_gene_id: LSHA_0408
symbol: mrp
gene_biotype: protein_coding
description:
  ATPase; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.


ensembl_gene_id: LSHA_0410
symbol: lysAC_1
gene_biotype: protein_coding
description:
  Bifunctional aspartate kinase/diaminopimelate decarboxylase protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.


ensembl_gene_id: LSHA_0416
symbol: mutS
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.


ensembl_gene_id: LSHA_0420
symbol: aqpZ
gene_biotype: protein_coding
description:
  Aquaporin Z; Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity; Belongs to the MIP/aquaporin (TC 1.A.8) family.


ensembl_gene_id: LSHA_0427
symbol: murJ
gene_biotype: protein_coding
description:
  Integral membrane protein; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.


ensembl_gene_id: LSHA_0431
symbol: pepA-2
gene_biotype: protein_coding
description:
  Aminopeptidase A/I; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.


ensembl_gene_id: LSHA_0443
symbol: greA
gene_biotype: protein_coding
description:
  Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.


ensembl_gene_id: LSHA_0452
symbol: smc
gene_biotype: protein_coding
description:
  Chromosome partition protein smc; Required for chromosome condensation and partitioning. Belongs to the SMC family.


ensembl_gene_id: LSHA_0453
symbol: zipA
gene_biotype: protein_coding
description:
  Cell division protein ZipA; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins.


ensembl_gene_id: LSHA_0454
symbol: murF
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.


ensembl_gene_id: LSHA_0455
symbol: mraY
gene_biotype: protein_coding
description:
  phospho-N-acetylmuramoyl-pentapeptide transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.


ensembl_gene_id: LSHA_0456
symbol: murD
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.


ensembl_gene_id: LSHA_0457
symbol: ftsW
gene_biotype: protein_coding
description:
  Cell division protein FtsW; Peptidoglycan polymerase that is essential for cell division. Belongs to the SEDS family. FtsW subfamily.


ensembl_gene_id: LSHA_0459
symbol: ddl
gene_biotype: protein_coding
description:
  D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.


ensembl_gene_id: LSHA_0460
symbol: ftsQ
gene_biotype: protein_coding
description:
  Cell division protein FtsQ; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly.


ensembl_gene_id: LSHA_0461
symbol: ftsA
gene_biotype: protein_coding
description:
  Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.


ensembl_gene_id: LSHA_0462
symbol: ftsZ
gene_biotype: protein_coding
description:
  Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.


ensembl_gene_id: LSHA_0463
symbol: lpxC
gene_biotype: protein_coding
description:
  UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the LpxC family.


ensembl_gene_id: LSHA_0466
symbol: trmL
gene_biotype: protein_coding
description:
  RNA methyltransferase TrmH family, group 2; Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S-adenosyl-L-methionine to the 2'-OH of the wobble nucleotide.


ensembl_gene_id: LSHA_0486
symbol: topA
gene_biotype: protein_coding
description:
  DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]


ensembl_gene_id: LSHA_0490
symbol: def
gene_biotype: protein_coding
description:
  Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.


ensembl_gene_id: LSHA_0491
symbol: fmt_1
gene_biotype: protein_coding
description:
  Methionyl tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.


ensembl_gene_id: LSHA_0492
symbol: rsmB
gene_biotype: protein_coding
description:
  16S rRNA methyltransferase; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.


ensembl_gene_id: LSHA_0530
symbol: yqiX
gene_biotype: protein_coding
description:
  Amino acid (glutamine) ABC transporter periplasmic amino acid binding protein; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: LSHA_0539
symbol: thiL
gene_biotype: protein_coding
description:
  Thiamine-monophosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family.


ensembl_gene_id: LSHA_0540
symbol: thiM
gene_biotype: protein_coding
description:
  Hydroxyethylthiazole kinase; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family.


ensembl_gene_id: LSHA_0541
symbol: thiDE
gene_biotype: protein_coding
description:
  Phosphomethylpyrimidine kinase/thiamin-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.


ensembl_gene_id: LSHA_0559
symbol: rpsR
gene_biotype: protein_coding
description:
  30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.


ensembl_gene_id: LSHA_0565
symbol: lidK
gene_biotype: protein_coding
description:
  (CDP-alcohol) phosphatidyltransferase; Condenses choline with CDP-diglyceride to produce phosphatidylcholine and CMP; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: LSHA_0570
symbol: gyrB
gene_biotype: protein_coding
description:
  DNA gyrase, subunit B (type II topoisomerase); A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP [...]


ensembl_gene_id: LSHA_0573
symbol: speA
gene_biotype: protein_coding
description:
  Arginine decarboxylase; Catalyzes the biosynthesis of agmatine from arginine. Belongs to the Orn/Lys/Arg decarboxylase class-II family. SpeA subfamily.


ensembl_gene_id: LSHA_0576
symbol: hfq
gene_biotype: protein_coding
description:
  Protein Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family.


ensembl_gene_id: LSHA_0577
symbol: hflX
gene_biotype: protein_coding
description:
  GTP binding protein HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.


ensembl_gene_id: LSHA_0588
symbol: rlmL
gene_biotype: protein_coding
description:
  Ribosomal RNA large subunit methyltransferase K/L; Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA. Belongs to the methyltransferase superfamily. RlmKL family.


ensembl_gene_id: LSHA_0592
symbol: pagP
gene_biotype: protein_coding
description:
  Palmitoyl transferase; Transfers a palmitate residue from the sn-1 position of a phospholipid to the N-linked hydroxymyristate on the proximal unit of lipid A or its precursors.


ensembl_gene_id: LSHA_0595
symbol: coq7
gene_biotype: protein_coding
description:
  Ubiquinone biosynthesis protein; Catalyzes the hydroxylation of 2-nonaprenyl-3-methyl-6- methoxy-1,4-benzoquinol during ubiquinone biosynthesis.


ensembl_gene_id: LSHA_0601
symbol: apaH
gene_biotype: protein_coding
description:
  Bis(5'-nucleosyl)-tetraphosphatase; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family.


ensembl_gene_id: LSHA_0603
symbol: ksgA
gene_biotype: protein_coding
description:
  Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.


ensembl_gene_id: LSHA_0604
symbol: panD
gene_biotype: protein_coding
description:
  Aspartate alpha-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.


ensembl_gene_id: LSHA_0605
symbol: tatC
gene_biotype: protein_coding
description:
  Sec-independent (periplasmic) protein translocase protein TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides.


ensembl_gene_id: LSHA_0610
symbol: rho
gene_biotype: protein_coding
description:
  Hypothetical protein; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.


ensembl_gene_id: LSHA_0612
symbol: Lsha_0612
gene_biotype: protein_coding
description:
  16S ribosomal RNA methyltransferase RsmE; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.


ensembl_gene_id: LSHA_0613
symbol: fumC
gene_biotype: protein_coding
description:
  Fumarate hydratase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.


ensembl_gene_id: LSHA_0619
symbol: lpxD_2
gene_biotype: protein_coding
description:
  UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily.


ensembl_gene_id: LSHA_0620
symbol: lpxB_1
gene_biotype: protein_coding
description:
  lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: LSHA_0629
symbol: ctrD
gene_biotype: protein_coding
description:
  Capsule polysaccharide export ATP-binding protein ctrD (Capsular-polysaccharide-transporting ATPase).


ensembl_gene_id: LSHA_0634
symbol: hipB_2
gene_biotype: protein_coding
description:
  Integration host factor subunit beta; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family.


ensembl_gene_id: LSHA_0643
symbol: pyrC
gene_biotype: protein_coding
description:
  Dihydroorotase, homodimeric type; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate.


ensembl_gene_id: LSHA_0644
symbol: rnsT
gene_biotype: protein_coding
description:
  Ribonuclease T; Trims short 3' overhangs of a variety of RNA species, leaving a one or two nucleotide 3' overhang. Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A). Also appears to be involved in tRNA biosynthesis.


ensembl_gene_id: LSHA_0649
symbol: ppnK
gene_biotype: protein_coding
description:
  Inorganic polyphosphate/ATP-NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.


ensembl_gene_id: LSHA_0655
symbol: yhdE
gene_biotype: protein_coding
description:
  Septum formation protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.


ensembl_gene_id: LSHA_0657
symbol: Lsha_0657
gene_biotype: protein_coding
description:
  RND multidrug efflux membrane fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: LSHA_0660
symbol: eno
gene_biotype: protein_coding
description:
  Phosphopyruvate hydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis.


ensembl_gene_id: LSHA_0662
symbol: Lsha_0662
gene_biotype: protein_coding
description:
  Cation efflux family protein; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.


ensembl_gene_id: LSHA_0663
symbol: recG
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.


ensembl_gene_id: LSHA_0669
symbol: dnaQ
gene_biotype: protein_coding
description:
  DNA polymerase III subunit epsilon; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease.


ensembl_gene_id: LSHA_0676
symbol: rsfS
gene_biotype: protein_coding
description:
  Ribosomal silencing factor RsfS; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.


ensembl_gene_id: LSHA_0677
symbol: rlmH
gene_biotype: protein_coding
description:
  rRNA large subunit methyltransferase; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.


ensembl_gene_id: LSHA_0687
symbol: mrdA
gene_biotype: protein_coding
description:
  Penicillin binding protein 2; Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily.


ensembl_gene_id: LSHA_0688
symbol: rodA
gene_biotype: protein_coding
description:
  Rod shape-determining protein rodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.


ensembl_gene_id: LSHA_0705
symbol: ybaL_1
gene_biotype: protein_coding
description:
  Monovalent cation:proton antiporter (CPA2 family); Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.


ensembl_gene_id: LSHA_0722
symbol: ffh
gene_biotype: protein_coding
description:
  Signal recognition particle protein Ffh; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual comp [...]


ensembl_gene_id: LSHA_0724
symbol: rimM
gene_biotype: protein_coding
description:
  16S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.


ensembl_gene_id: LSHA_0725
symbol: trmD
gene_biotype: protein_coding
description:
  tRNA (guanine N1) methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.


ensembl_gene_id: LSHA_0726
symbol: rplS
gene_biotype: protein_coding
description:
  50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.


ensembl_gene_id: LSHA_0751
symbol: ribD
gene_biotype: protein_coding
description:
  Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.


ensembl_gene_id: LSHA_0753
symbol: ribA
gene_biotype: protein_coding
description:
  Riboflavin biosynthesis protein RibA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.


ensembl_gene_id: LSHA_0754
symbol: ribH
gene_biotype: protein_coding
description:
  Riboflavin synthase beta chain (6,7-dimethyl-8-ribityllumazine synthase); Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin; Belongs to the DMRL synthase family.


ensembl_gene_id: LSHA_0756
symbol: pyrG
gene_biotype: protein_coding
description:
  CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.


ensembl_gene_id: LSHA_0762
symbol: bamD
gene_biotype: protein_coding
description:
  Competence lipoprotein ComL; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.


ensembl_gene_id: LSHA_0770
symbol: upp
gene_biotype: protein_coding
description:
  Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.


ensembl_gene_id: LSHA_0772
symbol: yacG
gene_biotype: protein_coding
description:
  DNA gyrase inhibitor YacG; Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C- terminal domain of GyrB, which probably disrupts DNA binding by the gyrase.


ensembl_gene_id: LSHA_0773
symbol: dctA
gene_biotype: protein_coding
description:
  C4-dicarboxylate transport protein; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: LSHA_0790
symbol: ugpE
gene_biotype: protein_coding
description:
  Sn-glycerol-3-phosphate transmembrane ABC transporter; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.


ensembl_gene_id: LSHA_0798
symbol: minE
gene_biotype: protein_coding
description:
  Septum formation topological specificity factor; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell.


ensembl_gene_id: LSHA_0800
symbol: guaB
gene_biotype: protein_coding
description:
  Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.


ensembl_gene_id: LSHA_0802
symbol: tadA
gene_biotype: protein_coding
description:
  tRNA-specific adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: LSHA_0803
symbol: glnD
gene_biotype: protein_coding
description:
  protein-PII uridylyltransferase; Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen metabolism.


ensembl_gene_id: LSHA_0804
symbol: map
gene_biotype: protein_coding
description:
  Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.


ensembl_gene_id: LSHA_0812
symbol: ccmA
gene_biotype: protein_coding
description:
  Heme exporter protein CcmA; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family.


ensembl_gene_id: LSHA_0813
symbol: ccmB
gene_biotype: protein_coding
description:
  Heme exporter protein CcmB; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmB/CycW/HelB family.


ensembl_gene_id: LSHA_0814
symbol: ccmC
gene_biotype: protein_coding
description:
  Heme exporter protein CcmC; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmC/CycZ/HelC family.


ensembl_gene_id: LSHA_0815
symbol: ccmD
gene_biotype: protein_coding
description:
  Heme exporter protein CcmD; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmD/CycX/HelD family.


ensembl_gene_id: LSHA_0816
symbol: ccmE
gene_biotype: protein_coding
description:
  Cytochrome c-type biogenesis protein CcmE; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. Belongs to the CcmE/CycJ family.


ensembl_gene_id: LSHA_0829
symbol: prfC
gene_biotype: protein_coding
description:
  Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.


ensembl_gene_id: LSHA_0833
symbol: pntB
gene_biotype: protein_coding
description:
  NAD(P) transhydrogenase subunit beta; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family.


ensembl_gene_id: LSHA_0841
symbol: Lsha_0841
gene_biotype: protein_coding
description:
  Amino acid transporter; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: LSHA_0842
symbol: dapE
gene_biotype: protein_coding
description:
  Succinyl-diaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily.


ensembl_gene_id: LSHA_0843
symbol: dapD
gene_biotype: protein_coding
description:
  2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase; Belongs to the transferase hexapeptide repeat family.


ensembl_gene_id: LSHA_0866
symbol: flgA
gene_biotype: protein_coding
description:
  Flagellar basal body P-ring biosynthesis protein FlgA; Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P- ring assembly; Belongs to the FlgA family.


ensembl_gene_id: LSHA_0869
symbol: coaX
gene_biotype: protein_coding
description:
  Bvg accessory factor; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.


ensembl_gene_id: LSHA_0871
symbol: rsmH
gene_biotype: protein_coding
description:
  S-adenosylmethyl transferase MraW; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.


ensembl_gene_id: LSHA_0872
symbol: ftsL
gene_biotype: protein_coding
description:
  Cell division transmembrane protein FtsL; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic.


ensembl_gene_id: LSHA_0873
symbol: ftsI
gene_biotype: protein_coding
description:
  Peptidoglycan synthetase FtsI precursor; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum; Belongs to the transpeptidase family. FtsI subfamily.


ensembl_gene_id: LSHA_0874
symbol: murE
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanyl-D-glutamate-2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily.


ensembl_gene_id: LSHA_0875
symbol: rlpA_1
gene_biotype: protein_coding
description:
  Rare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.


ensembl_gene_id: LSHA_0876
symbol: dacA
gene_biotype: protein_coding
description:
  D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5); Belongs to the peptidase S11 family.


ensembl_gene_id: LSHA_0879
symbol: lipB
gene_biotype: protein_coding
description:
  Lipoyltransferase; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate.


ensembl_gene_id: LSHA_0891
symbol: Lsha_0891
gene_biotype: protein_coding
description:
  Type 4 (IV) prepilin-like protein leader peptide processing enzyme PilD; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.


ensembl_gene_id: LSHA_0895
symbol: Lsha_0895
gene_biotype: protein_coding
description:
  Putative phosphotransferase; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the phosphoenolpyruvate synthase (PEPS) by catalyzing its phosphorylation/dephosphorylation.


ensembl_gene_id: LSHA_0898
symbol: prpB
gene_biotype: protein_coding
description:
  2-methylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. Belongs to the isocitrate lyase/PEP mutase superfamily. Methylisocitrate lyase family.


ensembl_gene_id: LSHA_0900
symbol: mnmC
gene_biotype: protein_coding
description:
  FAD-dependent cmnm(5)s(2)U34 oxidoreductase; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the C-terminal section; belongs to the DAO family.


ensembl_gene_id: LSHA_0906
symbol: pcnB_1
gene_biotype: protein_coding
description:
  poly(A) polymerase; Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control. Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.


ensembl_gene_id: LSHA_0910
symbol: engA
gene_biotype: protein_coding
description:
  GTP-binding protein EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.


ensembl_gene_id: LSHA_0911
symbol: bamB
gene_biotype: protein_coding
description:
  PQQ (pyrrolo quinoline) WD40-like repeat, enzyme repeat domain protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.


ensembl_gene_id: LSHA_0916
symbol: yfgB
gene_biotype: protein_coding
description:
  Fe-S containing enzyme; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family.


ensembl_gene_id: LSHA_0917
symbol: ndk
gene_biotype: protein_coding
description:
  Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.


ensembl_gene_id: LSHA_0921
symbol: lpxH
gene_biotype: protein_coding
description:
  UDP-2,3-diacylglucosamine hydrolase; Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: LSHA_0922
symbol: minC
gene_biotype: protein_coding
description:
  Septum site determining protein MinC; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family.


ensembl_gene_id: LSHA_0928
symbol: pdhA
gene_biotype: protein_coding
description:
  Pyruvate dehydrogenase e1 component subunit alpha; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3).


ensembl_gene_id: LSHA_0934
symbol: tolB
gene_biotype: protein_coding
description:
  TolB protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.


ensembl_gene_id: LSHA_0936
symbol: tolR
gene_biotype: protein_coding
description:
  Membrane spanning protein in TolA-TolQ-TolR complex; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.


ensembl_gene_id: LSHA_0937
symbol: tolQ
gene_biotype: protein_coding
description:
  Biopolymer transport protein TolQ; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.


ensembl_gene_id: LSHA_0939
symbol: ruvB
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.


ensembl_gene_id: LSHA_0973
symbol: ack
gene_biotype: protein_coding
description:
  Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.


ensembl_gene_id: LSHA_0982
symbol: tyrS
gene_biotype: protein_coding
description:
  Tyrosyl tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 2 subfamily.


ensembl_gene_id: LSHA_0988
symbol: Lsha_0988
gene_biotype: protein_coding
description:
  Zinc binding dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily.


ensembl_gene_id: LSHA_1017
symbol: dnaX
gene_biotype: protein_coding
description:
  DNA polymerase III subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: LSHA_1018
symbol: ybaB
gene_biotype: protein_coding
description:
  Nucleoid-associated protein YbaB; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.


ensembl_gene_id: LSHA_1019
symbol: recR
gene_biotype: protein_coding
description:
  Recombinational DNA repair protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.


ensembl_gene_id: LSHA_1026
symbol: folA
gene_biotype: protein_coding
description:
  Dihydrofolate reductase FolA; Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis.


ensembl_gene_id: LSHA_1027
symbol: pdxA
gene_biotype: protein_coding
description:
  4-hydroxythreonine-4-phosphate dehydrogenase; Catalyzes the NAD(P)-dependent oxidation of 4-(phosphooxy)-L- threonine (HTP) into 2-amino-3-oxo-4-(phosphooxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP).


ensembl_gene_id: LSHA_1028
symbol: surA-2
gene_biotype: protein_coding
description:
  Peptidyl-prolyl cis-trans isomerase D; Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation.


ensembl_gene_id: LSHA_1029
symbol: lptD
gene_biotype: protein_coding
description:
  Organic solvent tolerance protein; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane.


ensembl_gene_id: LSHA_1036
symbol: ppk
gene_biotype: protein_coding
description:
  Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.


ensembl_gene_id: LSHA_1038
symbol: efp
gene_biotype: protein_coding
description:
  Elongation factor P; Involved in peptide bond synthesis. Alleviates ribosome stalling that occurs when 3 or more consecutive Pro residues or the sequence PPG is present in a protein, possibly by augmenting the peptidyl transferase activity of the ribosome. Modification of Lys-34 is required for alleviation; Belongs to the elongation factor P family.


ensembl_gene_id: LSHA_1042
symbol: Lsha_1042
gene_biotype: protein_coding
description:
  Formate dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of formate to carbon dioxide. Formate oxidation is the final step in the methanol oxidation pathway in methylotrophic microorganisms. Has a role in the detoxification of exogenous formate in non-methylotrophic organisms. Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. FDH subfamily.


ensembl_gene_id: LSHA_1045
symbol: Lsha_1045
gene_biotype: protein_coding
description:
  Ada protein (O6-methylguanine-DNA methyltransferase); Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated.


ensembl_gene_id: LSHA_1049
symbol: ung_1
gene_biotype: protein_coding
description:
  Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.


ensembl_gene_id: LSHA_1075
symbol: hemA
gene_biotype: protein_coding
description:
  Glutamyl tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).


ensembl_gene_id: LSHA_1115
symbol: Lsha_1115
gene_biotype: protein_coding
description:
  Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.


ensembl_gene_id: LSHA_1116
symbol: Lsha_1116
gene_biotype: protein_coding
description:
  Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: LSHA_1119
symbol: recF
gene_biotype: protein_coding
description:
  RecF recombinational DNA repair ATPase; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP.


ensembl_gene_id: LSHA_1120
symbol: dnaN
gene_biotype: protein_coding
description:
  DNA polymerase III, beta chain; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of r [...]


ensembl_gene_id: LSHA_1121
symbol: dnaA
gene_biotype: protein_coding
description:
  Chromosome replication initiator DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.


ensembl_gene_id: LSHA_1122
symbol: rnpA
gene_biotype: protein_coding
description:
  Ribonuclease P protein component (RNase P); RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.


ensembl_gene_id: LSHA_1123
symbol: yidD
gene_biotype: protein_coding
description:
  Putative membrane protein insertion efficiency factor; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.


ensembl_gene_id: LSHA_1124
symbol: oxaA
gene_biotype: protein_coding
description:
  Preprotein translocase subunit YidC; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins.


ensembl_gene_id: LSHA_1125
symbol: trmE
gene_biotype: protein_coding
description:
  tRNA modification GTPase TrmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.


ensembl_gene_id: LSHA_1129
symbol: rsmI
gene_biotype: protein_coding
description:
  Tetrapyrrole (corrin/porphyrin) methylase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.


ensembl_gene_id: LSHA_1137
symbol: atpB
gene_biotype: protein_coding
description:
  ATP synthase F0 subunit A; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.


ensembl_gene_id: LSHA_1138
symbol: atpE
gene_biotype: protein_coding
description:
  ATP synthase F0F1 subunit C; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: LSHA_1139
symbol: atpF
gene_biotype: protein_coding
description:
  H+-transporting ATP synthase chain b; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.


ensembl_gene_id: LSHA_1140
symbol: atpH
gene_biotype: protein_coding
description:
  ATP synthase F1 subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: LSHA_1141
symbol: atpA
gene_biotype: protein_coding
description:
  ATP synthase F0F1 subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.


ensembl_gene_id: LSHA_1142
symbol: atpG
gene_biotype: protein_coding
description:
  ATP synthase F0F1 subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.


ensembl_gene_id: LSHA_1143
symbol: atpD
gene_biotype: protein_coding
description:
  ATP synthase F0F1 subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.


ensembl_gene_id: LSHA_1144
symbol: atpC
gene_biotype: protein_coding
description:
  F1 sector of membrane-bound ATP synthase, epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.


ensembl_gene_id: LSHA_1145
symbol: parC
gene_biotype: protein_coding
description:
  DNA topoisomerase IV subunit A; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase GyrA/ParC subunit family. ParC type 1 subfamily.


ensembl_gene_id: LSHA_1151
symbol: Lsha_1151
gene_biotype: protein_coding
description:
  ProQ; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities; Belongs to the ProQ family.


ensembl_gene_id: LSHA_1152
symbol: dapB
gene_biotype: protein_coding
description:
  Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.


ensembl_gene_id: LSHA_1155
symbol: psd
gene_biotype: protein_coding
description:
  Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).


ensembl_gene_id: LSHA_1157
symbol: Lsha_1157
gene_biotype: protein_coding
description:
  SUA5/yciO/yrdC family transporter:Sua5/YciO/YrdC/YwlC family transporter protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.


ensembl_gene_id: LSHA_1161
symbol: argD
gene_biotype: protein_coding
description:
  Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.


ensembl_gene_id: LSHA_1162
symbol: Lsha_1162
gene_biotype: protein_coding
description:
  Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.


ensembl_gene_id: LSHA_1167
symbol: acsB
gene_biotype: protein_coding
description:
  Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA.


ensembl_gene_id: LSHA_1168
symbol: yihA
gene_biotype: protein_coding
description:
  GTP-binding protein; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.


ensembl_gene_id: LSHA_1175
symbol: gcvT
gene_biotype: protein_coding
description:
  Glycine cleavage system T protein; The glycine cleavage system catalyzes the degradation of glycine.


ensembl_gene_id: LSHA_1176
symbol: gcvH
gene_biotype: protein_coding
description:
  Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.


ensembl_gene_id: LSHA_1177
symbol: gcsA
gene_biotype: protein_coding
description:
  Glycine dehydrogenase subunit 1; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein.


ensembl_gene_id: LSHA_1179
symbol: gcvPB
gene_biotype: protein_coding
description:
  Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. C-terminal subunit subfamily.


ensembl_gene_id: LSHA_1182
symbol: Lsha_1182
gene_biotype: protein_coding
description:
  Iron/ascorbate oxidoreductase family protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.


ensembl_gene_id: LSHA_1188
symbol: fabF_1
gene_biotype: protein_coding
description:
  3-oxoacyl-ACP synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.


ensembl_gene_id: LSHA_1191
symbol: polA
gene_biotype: protein_coding
description:
  DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.


ensembl_gene_id: LSHA_1197
symbol: rpiA
gene_biotype: protein_coding
description:
  Ribose 5-phosphate isomerase, constitutive; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.


ensembl_gene_id: LSHA_1199
symbol: vacB
gene_biotype: protein_coding
description:
  Exoribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.


ensembl_gene_id: LSHA_1213
symbol: tsf
gene_biotype: protein_coding
description:
  Translation elongation factor Ts (EF-Ts); Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.


ensembl_gene_id: LSHA_1215
symbol: rrf
gene_biotype: protein_coding
description:
  Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.


ensembl_gene_id: LSHA_1223
symbol: plsX
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate acyltransferase PlsX; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.


ensembl_gene_id: LSHA_1224
symbol: fabH_2
gene_biotype: protein_coding
description:
  3-oxoacyl-ACP synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.


ensembl_gene_id: LSHA_1226
symbol: fabG_2
gene_biotype: protein_coding
description:
  3-oxoacyl-ACP reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: LSHA_1228
symbol: fabF_2
gene_biotype: protein_coding
description:
  3-oxoacyl-ACP synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.


ensembl_gene_id: LSHA_1229
symbol: mltG
gene_biotype: protein_coding
description:
  Periplasmic solute-binding protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family.


ensembl_gene_id: LSHA_1230
symbol: tmk
gene_biotype: protein_coding
description:
  Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.


ensembl_gene_id: LSHA_1235
symbol: anmK
gene_biotype: protein_coding
description:
  anhydro-N-acetylmuramic acid kinase; Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the anhydro-N-acetylmuramic acid kinase family.


ensembl_gene_id: LSHA_1257
symbol: thrB
gene_biotype: protein_coding
description:
  Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily.


ensembl_gene_id: LSHA_1258
symbol: lysAC_2
gene_biotype: protein_coding
description:
  Bifunctional aspartate kinase/diaminopimelate decarboxylase protein; In the C-terminal section; belongs to the homoserine dehydrogenase family.


ensembl_gene_id: LSHA_1261
symbol: tuf
gene_biotype: protein_coding
description:
  Elongation factor Tu (EF-Tu); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.


ensembl_gene_id: LSHA_1262
symbol: secE
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation; Belongs to the SecE/SEC61-gamma family.


ensembl_gene_id: LSHA_1263
symbol: nusG
gene_biotype: protein_coding
description:
  Transcription antitermination protein NusG; Participates in transcription elongation, termination and antitermination.


ensembl_gene_id: LSHA_1264
symbol: rplK
gene_biotype: protein_coding
description:
  50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.


ensembl_gene_id: LSHA_1265
symbol: rplA
gene_biotype: protein_coding
description:
  50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.


ensembl_gene_id: LSHA_1266
symbol: rplJ
gene_biotype: protein_coding
description:
  50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.


ensembl_gene_id: LSHA_1267
symbol: rplL
gene_biotype: protein_coding
description:
  50S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.


ensembl_gene_id: LSHA_1268
symbol: rpoB
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: LSHA_1270
symbol: rpsL
gene_biotype: protein_coding
description:
  30S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.


ensembl_gene_id: LSHA_1271
symbol: rpsG
gene_biotype: protein_coding
description:
  30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.


ensembl_gene_id: LSHA_1272
symbol: fusA_1
gene_biotype: protein_coding
description:
  Elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.


ensembl_gene_id: LSHA_1274
symbol: rpsJ
gene_biotype: protein_coding
description:
  30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.


ensembl_gene_id: LSHA_1275
symbol: rplC
gene_biotype: protein_coding
description:
  50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.


ensembl_gene_id: LSHA_1277
symbol: rplW
gene_biotype: protein_coding
description:
  50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.


ensembl_gene_id: LSHA_1278
symbol: rplB
gene_biotype: protein_coding
description:
  50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.


ensembl_gene_id: LSHA_1279
symbol: rpsS
gene_biotype: protein_coding
description:
  30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.


ensembl_gene_id: LSHA_1280
symbol: rplV
gene_biotype: protein_coding
description:
  50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.


ensembl_gene_id: LSHA_1281
symbol: rpsC
gene_biotype: protein_coding
description:
  30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.


ensembl_gene_id: LSHA_1282
symbol: rplP
gene_biotype: protein_coding
description:
  50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.


ensembl_gene_id: LSHA_1284
symbol: rpsQ
gene_biotype: protein_coding
description:
  30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.


ensembl_gene_id: LSHA_1285
symbol: rplN
gene_biotype: protein_coding
description:
  50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.


ensembl_gene_id: LSHA_1286
symbol: rplX
gene_biotype: protein_coding
description:
  50S ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.


ensembl_gene_id: LSHA_1287
symbol: rplE
gene_biotype: protein_coding
description:
  50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.


ensembl_gene_id: LSHA_1288
symbol: rpsH
gene_biotype: protein_coding
description:
  30S ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.


ensembl_gene_id: LSHA_1289
symbol: rplF
gene_biotype: protein_coding
description:
  50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.


ensembl_gene_id: LSHA_1290
symbol: rplR
gene_biotype: protein_coding
description:
  50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.


ensembl_gene_id: LSHA_1291
symbol: rpsE
gene_biotype: protein_coding
description:
  30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.


ensembl_gene_id: LSHA_1293
symbol: rplO
gene_biotype: protein_coding
description:
  50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.


ensembl_gene_id: LSHA_1294
symbol: secY
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.


ensembl_gene_id: LSHA_1295
symbol: rpsM
gene_biotype: protein_coding
description:
  30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.


ensembl_gene_id: LSHA_1296
symbol: rpsK
gene_biotype: protein_coding
description:
  30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.


ensembl_gene_id: LSHA_1297
symbol: rpsD
gene_biotype: protein_coding
description:
  30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.


ensembl_gene_id: LSHA_1298
symbol: rpoA
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: LSHA_1301
symbol: Lsha_1301
gene_biotype: protein_coding
description:
  Single strand binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.


ensembl_gene_id: LSHA_1312
symbol: dapF
gene_biotype: protein_coding
description:
  Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.


ensembl_gene_id: LSHA_1358
symbol: mutH
gene_biotype: protein_coding
description:
  DNA mismatch repair protein; Sequence-specific endonuclease that cleaves unmethylated GATC sequences. It is involved in DNA mismatch repair. Belongs to the MutH family.


ensembl_gene_id: LSHA_1360
symbol: aspS
gene_biotype: protein_coding
description:
  aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.


ensembl_gene_id: LSHA_1363
symbol: bioH
gene_biotype: protein_coding
description:
  Biotin biosynthesis protein BioH; The physiological role of BioH is to remove the methyl group introduced by BioC when the pimeloyl moiety is complete. It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway through the hydrolysis of the ester bonds of pimeloyl-ACP esters.


ensembl_gene_id: LSHA_1365
symbol: bioB
gene_biotype: protein_coding
description:
  Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.


ensembl_gene_id: LSHA_1366
symbol: bioA
gene_biotype: protein_coding
description:
  Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: LSHA_1369
symbol: coaE
gene_biotype: protein_coding
description:
  dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.


ensembl_gene_id: LSHA_1370
symbol: zapD
gene_biotype: protein_coding
description:
  Cell division protein ZapD; Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity.


ensembl_gene_id: LSHA_1373
symbol: secA
gene_biotype: protein_coding
description:
  Preprotein translocase, secretion protein SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. Belongs to the SecA family.


ensembl_gene_id: LSHA_1375
symbol: yjbN
gene_biotype: protein_coding
description:
  tRNA-dihydrouridine synthase A; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.


ensembl_gene_id: LSHA_1387
symbol: relA
gene_biotype: protein_coding
description:
  GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.


ensembl_gene_id: LSHA_1388
symbol: rumA
gene_biotype: protein_coding
description:
  23S rRNA 5-methyluridine methyltransferase; Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. RlmD subfamily.


ensembl_gene_id: LSHA_1390
symbol: Lsha_1390
gene_biotype: protein_coding
description:
  MFS transporter DHA2 family multidrug resistance protein B; Belongs to the major facilitator superfamily.


ensembl_gene_id: LSHA_1391
symbol: adk-2
gene_biotype: protein_coding
description:
  Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.


ensembl_gene_id: LSHA_1395
symbol: uvrC
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.


ensembl_gene_id: LSHA_1399
symbol: obg
gene_biotype: protein_coding
description:
  GTP-binding protein, GTP1/Obg family; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.


ensembl_gene_id: LSHA_1401
symbol: rplU
gene_biotype: protein_coding
description:
  50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.


ensembl_gene_id: LSHA_1402
symbol: rplY
gene_biotype: protein_coding
description:
  50S ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.


ensembl_gene_id: LSHA_1403
symbol: pth
gene_biotype: protein_coding
description:
  peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.


ensembl_gene_id: LSHA_1404
symbol: ychF
gene_biotype: protein_coding
description:
  GTP-binding protein; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.


ensembl_gene_id: LSHA_1415
symbol: dnaB
gene_biotype: protein_coding
description:
  Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily.


ensembl_gene_id: LSHA_1416
symbol: alr
gene_biotype: protein_coding
description:
  Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.


ensembl_gene_id: LSHA_1429
symbol: lipA
gene_biotype: protein_coding
description:
  Lipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.


ensembl_gene_id: LSHA_1461
symbol: csrA-2
gene_biotype: protein_coding
description:
  Global regulator (carbon storage regulator); A key translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Mediates global changes in gene expression, shifting from rapid growth to stress survival by linking envelope stress, the stringent response and the catabolite repression systems. Usually binds in the 5'-UTR; binding at or near the Shine-Dalgarno sequence prevents ribosome-binding, repressing translation, binding elsewhere in the 5'-UTR can activate translation and/or stabilize the mRNA. Its function is antagonized by small RNA(s).


ensembl_gene_id: LSHA_1462
symbol: birA
gene_biotype: protein_coding
description:
  biotin-[acetylCoA carboxylase] holoenzyme synthetase and biotin operon repressor; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio-5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon.


ensembl_gene_id: LSHA_1464
symbol: accA
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase carboxyltransferase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.


ensembl_gene_id: LSHA_1465
symbol: tilS
gene_biotype: protein_coding
description:
  Cell cycle protein MesJ; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.


ensembl_gene_id: LSHA_1478
symbol: nadA
gene_biotype: protein_coding
description:
  Quinolinate synthetase A; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.


ensembl_gene_id: LSHA_1483
symbol: ppsA
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family.


ensembl_gene_id: LSHA_1486
symbol: murG
gene_biotype: protein_coding
description:
  Undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.


ensembl_gene_id: LSHA_1495
symbol: clpS
gene_biotype: protein_coding
description:
  Regulatory protein for ClpA substrate specificity; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.


ensembl_gene_id: LSHA_1502
symbol: xseA
gene_biotype: protein_coding
description:
  Exonuclease VII large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.


ensembl_gene_id: LSHA_1508
symbol: Lsha_1508
gene_biotype: protein_coding
description:
  Short chain dehydrogenase/reductase family oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: LSHA_1511
symbol: trpD
gene_biotype: protein_coding
description:
  Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).


ensembl_gene_id: LSHA_1516
symbol: Lsha_1516
gene_biotype: protein_coding
description:
  Hydrolase; Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8- phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate; Belongs to the KdsC family.


ensembl_gene_id: LSHA_1524
symbol: murA
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.


ensembl_gene_id: LSHA_1534
symbol: astB
gene_biotype: protein_coding
description:
  Succinylarginine dihydrolase; Catalyzes the hydrolysis of N(2)-succinylarginine into N(2)- succinylornithine, ammonia and CO(2).


ensembl_gene_id: LSHA_1535
symbol: astD
gene_biotype: protein_coding
description:
  Succinylglutamic-5-semialdehyde dehydrogenase; Catalyzes the NAD-dependent reduction of succinylglutamate semialdehyde into succinylglutamate.


ensembl_gene_id: LSHA_1545
symbol: ubiG_2
gene_biotype: protein_coding
description:
  3-demethylubiquinone-9 3-methyltransferase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family.


ensembl_gene_id: LSHA_1546
symbol: Lsha_1546
gene_biotype: protein_coding
description:
  ProQ-like, activator of ProP osmoprotectant transporter; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities; Belongs to the ProQ family.


ensembl_gene_id: LSHA_1552
symbol: Lsha_1552
gene_biotype: protein_coding
description:
  Bifunctional PutA protein; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: LSHA_1558
symbol: ybbO
gene_biotype: protein_coding
description:
  Oxidoreductase with NAD(P)-binding Rossmann-fold domain protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: LSHA_1564
symbol: purL
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase II (FGAM synthase II); Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is [...]


ensembl_gene_id: LSHA_1566
symbol: Lsha_1566
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase I; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to assist i [...]


ensembl_gene_id: LSHA_1568
symbol: purF
gene_biotype: protein_coding
description:
  Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.


ensembl_gene_id: LSHA_1570
symbol: purN
gene_biotype: protein_coding
description:
  Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.


ensembl_gene_id: LSHA_1571
symbol: purE
gene_biotype: protein_coding
description:
  Phosphoribosylaminoimidazole carboxylase catalytic subunit; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).


ensembl_gene_id: LSHA_1585
symbol: Lsha_1585
gene_biotype: protein_coding
description:
  Sugar-proton symporter; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.


ensembl_gene_id: LSHA_1596
symbol: glpD
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: LSHA_1597
symbol: glpK
gene_biotype: protein_coding
description:
  Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.


ensembl_gene_id: LSHA_1603
symbol: gyrA
gene_biotype: protein_coding
description:
  DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: LSHA_1604
symbol: serC
gene_biotype: protein_coding
description:
  Phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily.


ensembl_gene_id: LSHA_1605
symbol: aroA
gene_biotype: protein_coding
description:
  3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.


ensembl_gene_id: LSHA_1607
symbol: Lsha_1607
gene_biotype: protein_coding
description:
  30S ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence.


ensembl_gene_id: LSHA_1609
symbol: lapB
gene_biotype: protein_coding
description:
  Tetratricopeptide repeat protein; Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane; Belongs to the LapB family.


ensembl_gene_id: LSHA_1611
symbol: pyrF
gene_biotype: protein_coding
description:
  Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily.


ensembl_gene_id: LSHA_1617
symbol: ubiA
gene_biotype: protein_coding
description:
  4-hydroxybenzoate-octaprenyltransferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate.


ensembl_gene_id: LSHA_1620
symbol: deoC
gene_biotype: protein_coding
description:
  2-deoxyribose-5-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate.


ensembl_gene_id: LSHA_1621
symbol: xapA
gene_biotype: protein_coding
description:
  Xanthosine phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.


ensembl_gene_id: LSHA_1622
symbol: cdd
gene_biotype: protein_coding
description:
  Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: LSHA_1628
symbol: ybeY
gene_biotype: protein_coding
description:
  Metal-dependent hydrolase; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.


ensembl_gene_id: LSHA_1634
symbol: scpA
gene_biotype: protein_coding
description:
  Segregation and condensation protein A; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: LSHA_1635
symbol: scpB
gene_biotype: protein_coding
description:
  Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: LSHA_1641
symbol: kup
gene_biotype: protein_coding
description:
  KUP system potassium uptake protein; Transport of potassium into the cell; Belongs to the HAK/KUP transporter (TC 2.A.72) family.


ensembl_gene_id: LSHA_1646
symbol: hisI
gene_biotype: protein_coding
description:
  Bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein; In the N-terminal section; belongs to the PRA-CH family.


ensembl_gene_id: LSHA_1647
symbol: hisF
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase subunit HisF; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.


ensembl_gene_id: LSHA_1649
symbol: hisH
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase subunit HisH; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.


ensembl_gene_id: LSHA_1650
symbol: hisB
gene_biotype: protein_coding
description:
  Histidinol-phosphatase/imisazoleglycerol- phosphat e dehydratase; In the N-terminal section; belongs to the histidinol- phosphatase family.


ensembl_gene_id: LSHA_1651
symbol: hisC
gene_biotype: protein_coding
description:
  Histidinol-phosphate aminotransferase (imidazole acetol-phosphate transaminase); Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.


ensembl_gene_id: LSHA_1652
symbol: hisD
gene_biotype: protein_coding
description:
  Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.


ensembl_gene_id: LSHA_1653
symbol: hisG
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Long subfamily.


ensembl_gene_id: LSHA_1655
symbol: pyrE
gene_biotype: protein_coding
description:
  Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).


ensembl_gene_id: LSHA_1661
symbol: hemF
gene_biotype: protein_coding
description:
  Oxygen-dependent coproporphyrinogen III oxidase; Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen- IX.


ensembl_gene_id: LSHA_1662
symbol: flgB
gene_biotype: protein_coding
description:
  Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.


ensembl_gene_id: LSHA_1664
symbol: flgD
gene_biotype: protein_coding
description:
  Flagellar basal body rod modification protein; Required for flagellar hook formation. May act as a scaffolding protein.


ensembl_gene_id: LSHA_1668
symbol: flgH
gene_biotype: protein_coding
description:
  Flagellar basal body L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.


ensembl_gene_id: LSHA_1669
symbol: flgI
gene_biotype: protein_coding
description:
  Flagellar P-ring protein (precursor) FlgI; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.


ensembl_gene_id: LSHA_1679
symbol: engC
gene_biotype: protein_coding
description:
  EngC GTPase; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.


ensembl_gene_id: LSHA_1680
symbol: cca
gene_biotype: protein_coding
description:
  tRNA nucleotidyltransferase; Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. Also shows phosphatase, 2'-nucleotidase and 2',3'-cyclic phosphodiesterase activities. These phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases.


ensembl_gene_id: LSHA_1681
symbol: orn
gene_biotype: protein_coding
description:
  Oligoribonuclease; 3'-to-5' exoribonuclease specific for small oligoribonucleotides; Belongs to the oligoribonuclease family.


ensembl_gene_id: LSHA_1682
symbol: queH
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr).


ensembl_gene_id: LSHA_1690
symbol: hemD
gene_biotype: protein_coding
description:
  uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.


ensembl_gene_id: LSHA_1691
symbol: hemC
gene_biotype: protein_coding
description:
  Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.


ensembl_gene_id: LSHA_1699
symbol: dsbB
gene_biotype: protein_coding
description:
  Disulfide bond formation protein B (Disulfide oxidoreductase); Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein; Belongs to the DsbB family.


ensembl_gene_id: LSHA_1700
symbol: tgt_2
gene_biotype: protein_coding
description:
  Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form t [...]


ensembl_gene_id: LSHA_1701
symbol: ppiB
gene_biotype: protein_coding
description:
  Peptidyl-prolyl cis-trans isomerase B; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.


ensembl_gene_id: LSHA_1707
symbol: thrS
gene_biotype: protein_coding
description:
  threonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr).


ensembl_gene_id: LSHA_1708
symbol: infC
gene_biotype: protein_coding
description:
  Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.


ensembl_gene_id: LSHA_1710
symbol: rplT
gene_biotype: protein_coding
description:
  50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.


ensembl_gene_id: LSHA_1711
symbol: pheS
gene_biotype: protein_coding
description:
  phenylalanyl-tRNA synthetase, alpha subunit; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.


ensembl_gene_id: LSHA_1712
symbol: pheT
gene_biotype: protein_coding
description:
  phenylalanyl-tRNA synthetase subunit beta; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.


ensembl_gene_id: LSHA_1713
symbol: himA
gene_biotype: protein_coding
description:
  Integration host factor subunit Alpha; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family.


ensembl_gene_id: LSHA_1715
symbol: rplM
gene_biotype: protein_coding
description:
  50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.


ensembl_gene_id: LSHA_1717
symbol: petA
gene_biotype: protein_coding
description:
  Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.


ensembl_gene_id: LSHA_1718
symbol: petB
gene_biotype: protein_coding
description:
  Ubiquinol-cytochrome c reductase, cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.


ensembl_gene_id: LSHA_1722
symbol: nnrE
gene_biotype: protein_coding
description:
  Sugar kinase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration.  Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of  [...]


ensembl_gene_id: LSHA_1725
symbol: mutL_1
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.


ensembl_gene_id: LSHA_1726
symbol: miaA
gene_biotype: protein_coding
description:
  tRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.


ensembl_gene_id: LSHA_1748
symbol: Lsha_1748
gene_biotype: protein_coding
description:
  Putative methylase; Specifically methylates the guanine in position 966 of 16S rRNA in the assembled 30S particle; Belongs to the methyltransferase superfamily. RsmD family.


ensembl_gene_id: LSHA_1751
symbol: ftsY
gene_biotype: protein_coding
description:
  Cell division membrane protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components.


ensembl_gene_id: LSHA_1752
symbol: ftsE
gene_biotype: protein_coding
description:
  Cell division ATP transporter FtsE; Part of the ABC transporter FtsEX involved in cellular division.


ensembl_gene_id: LSHA_1753
symbol: ftsX
gene_biotype: protein_coding
description:
  Cell division ATP transporter FtsX; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.


ensembl_gene_id: LSHA_1754
symbol: rpoH
gene_biotype: protein_coding
description:
  RNA polymerase sigma-32 factor RpoH; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes.


ensembl_gene_id: LSHA_1760
symbol: panC
gene_biotype: protein_coding
description:
  Pantoate-beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.


ensembl_gene_id: LSHA_1761
symbol: panB
gene_biotype: protein_coding
description:
  3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family.


ensembl_gene_id: LSHA_1766
symbol: cutE_1
gene_biotype: protein_coding
description:
  Apolipoprotein N-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily.


ensembl_gene_id: LSHA_1772
symbol: feoB
gene_biotype: protein_coding
description:
  Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.


ensembl_gene_id: LSHA_1775
symbol: Lsha_1775
gene_biotype: protein_coding
description:
  N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Belongs to the methyltransferase superfamily.


ensembl_gene_id: LSHA_1796
symbol: sdhD
gene_biotype: protein_coding
description:
  Succinate dehydrogenase, hydrophobic membrane anchor protein; Membrane-anchoring subunit of succinate dehydrogenase (SDH).


ensembl_gene_id: LSHA_1797
symbol: sdhA_2
gene_biotype: protein_coding
description:
  Succinate dehydrogenase flavoprotein subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.


ensembl_gene_id: LSHA_1800
symbol: sucB
gene_biotype: protein_coding
description:
  Dihydrolipoamide succinyltransferase subunit E2; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2).


ensembl_gene_id: LSHA_1801
symbol: sucC
gene_biotype: protein_coding
description:
  Succinyl CoA synthetase beta chain; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.


ensembl_gene_id: LSHA_1802
symbol: sucD
gene_biotype: protein_coding
description:
  succinyl-CoA synthetase subunit alpha; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.


ensembl_gene_id: LSHA_1803
symbol: pdxH
gene_biotype: protein_coding
description:
  Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP).


ensembl_gene_id: LSHA_1808
symbol: fis_2
gene_biotype: protein_coding
description:
  Global DNA-binding transcriptional dual regulator; Belongs to the transcriptional regulatory Fis family.


ensembl_gene_id: LSHA_1812
symbol: prs
gene_biotype: protein_coding
description:
  Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.


ensembl_gene_id: LSHA_1816
symbol: Lsha_1816
gene_biotype: protein_coding
description:
  Cellulose synthase regulator protein; Binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); Belongs to the AcsB/BcsB family.


ensembl_gene_id: LSHA_1833
symbol: yrfI
gene_biotype: protein_coding
description:
  Heat shock protein 33; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress; Belongs to the HSP33 family.


ensembl_gene_id: LSHA_1834
symbol: rep
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase Rep; Rep helicase is a single-stranded DNA-dependent ATPase involved in DNA replication; it can initiate unwinding at a nick in the DNA. It binds to the single-stranded DNA and acts in a progressive fashion along the DNA in the 3' to 5' direction.


ensembl_gene_id: LSHA_1844
symbol: aroE
gene_biotype: protein_coding
description:
  Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).


ensembl_gene_id: LSHA_1850
symbol: Lsha_1850
gene_biotype: protein_coding
description:
  Phosphatidylglycerophosphate synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: LSHA_1854
symbol: rrmJ
gene_biotype: protein_coding
description:
  Ribosomal RNA large subunit methyltransferase (cell division protein FtsJ); Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit.


ensembl_gene_id: LSHA_1855
symbol: ftsH_2
gene_biotype: protein_coding
description:
  Cell division protease ftsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family.  In the central section; belongs to the AAA ATPase family.


ensembl_gene_id: LSHA_1856
symbol: folP
gene_biotype: protein_coding
description:
  7,8-dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives.


ensembl_gene_id: LSHA_1857
symbol: glmM
gene_biotype: protein_coding
description:
  Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.


ensembl_gene_id: LSHA_1859
symbol: tpiA
gene_biotype: protein_coding
description:
  Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.


ensembl_gene_id: LSHA_1860
symbol: secG
gene_biotype: protein_coding
description:
  Protein-export membrane protein secG (preprotein translocase subunit); Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.


ensembl_gene_id: LSHA_1861
symbol: nuoA
gene_biotype: protein_coding
description:
  NADH dehydrogenase I chain A; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family.


ensembl_gene_id: LSHA_1862
symbol: nuoB
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit B; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: LSHA_1863
symbol: nuoC
gene_biotype: protein_coding
description:
  NADH dehydrogenase I chain C; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family.


ensembl_gene_id: LSHA_1864
symbol: nuoD
gene_biotype: protein_coding
description:
  NADH dehydrogenase I subunit D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family.


ensembl_gene_id: LSHA_1866
symbol: Lsha_1866
gene_biotype: protein_coding
description:
  NADH dehydrogenase I subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family.


ensembl_gene_id: LSHA_1867
symbol: nuoG
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit G; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family.


ensembl_gene_id: LSHA_1868
symbol: nuoH
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase chain H; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone.


ensembl_gene_id: LSHA_1869
symbol: nuoI
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: LSHA_1870
symbol: nuoJ
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase chain J; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: LSHA_1871
symbol: nuoK
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase chain K; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family.


ensembl_gene_id: LSHA_1874
symbol: nuoN
gene_biotype: protein_coding
description:
  NADH dehydrogenase I subunit N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family.


ensembl_gene_id: LSHA_1875
symbol: rimP
gene_biotype: protein_coding
description:
  Ribosome maturation factor RimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.


ensembl_gene_id: LSHA_1876
symbol: nusA
gene_biotype: protein_coding
description:
  Transcription elongation protein nusA; Participates in both transcription termination and antitermination.


ensembl_gene_id: LSHA_1877
symbol: infB
gene_biotype: protein_coding
description:
  Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.


ensembl_gene_id: LSHA_1878
symbol: rbfA
gene_biotype: protein_coding
description:
  Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.


ensembl_gene_id: LSHA_1879
symbol: truB
gene_biotype: protein_coding
description:
  tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.


ensembl_gene_id: LSHA_1880
symbol: rpsO
gene_biotype: protein_coding
description:
  30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.


ensembl_gene_id: LSHA_1881
symbol: pnp
gene_biotype: protein_coding
description:
  Polynucleotide phosphorylase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.


ensembl_gene_id: LSHA_1886
symbol: ppa
gene_biotype: protein_coding
description:
  Inorganic pyrophosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.


ensembl_gene_id: LSHA_1903
symbol: fadB
gene_biotype: protein_coding
description:
  3-hydroxyacyl CoA dehydrogenase oxidoreductase protein; Belongs to the enoyl-CoA hydratase/isomerase family.


ensembl_gene_id: LSHA_1908
symbol: rlpB
gene_biotype: protein_coding
description:
  Rare lipoprotein B; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane.


ensembl_gene_id: LSHA_1910
symbol: nadD
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide adenylyltransferase NadD; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).


ensembl_gene_id: LSHA_1914
symbol: accD
gene_biotype: protein_coding
description:
  Acetyl CoA carboxylase carboxyltransferase subunit beta; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.


ensembl_gene_id: LSHA_1915
symbol: flaA
gene_biotype: protein_coding
description:
  Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.


ensembl_gene_id: LSHA_1917
symbol: fliD
gene_biotype: protein_coding
description:
  Flagellar hook associated protein 2 FliD; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.


ensembl_gene_id: LSHA_1921
symbol: miaB
gene_biotype: protein_coding
description:
  (dimethylallyl)adenosine tRNA methylthiotransferase; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.


ensembl_gene_id: LSHA_1922
symbol: rluD
gene_biotype: protein_coding
description:
  Uracil hydrolyase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: LSHA_1927
symbol: lspE
gene_biotype: protein_coding
description:
  Type II protein secretion ATPase LspE; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.


ensembl_gene_id: LSHA_1933
symbol: trpA
gene_biotype: protein_coding
description:
  Tryptophan synthase subunit alpha; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.


ensembl_gene_id: LSHA_1934
symbol: trpB
gene_biotype: protein_coding
description:
  Tryptophan synthase subunit beta; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.


ensembl_gene_id: LSHA_1936
symbol: truA
gene_biotype: protein_coding
description:
  tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.


ensembl_gene_id: LSHA_1939
symbol: gad
gene_biotype: protein_coding
description:
  Guanine aminohydrolase; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia; Belongs to the metallo-dependent hydrolases superfamily. ATZ/TRZ family.


ensembl_gene_id: LSHA_1942
symbol: folD
gene_biotype: protein_coding
description:
  Methenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.


ensembl_gene_id: LSHA_1944
symbol: rlmJ
gene_biotype: protein_coding
description:
  Protein involved in catabolism of external DNA; Specifically methylates the adenine in position 2030 of 23S rRNA.


ensembl_gene_id: LSHA_1945
symbol: gloB
gene_biotype: protein_coding
description:
  Hydroxyacylglutathione hydrolase (glyoxalase II); Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid.


ensembl_gene_id: LSHA_1947
symbol: Lsha_1947
gene_biotype: protein_coding
description:
  Intracellular septation protein A; Involved in cell division; probably involved in intracellular septation; Belongs to the YciB family.


ensembl_gene_id: LSHA_1950
symbol: ruvA
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.


ensembl_gene_id: LSHA_1951
symbol: ruvC
gene_biotype: protein_coding
description:
  Holliday junction resolvase; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.


ensembl_gene_id: LSHA_1954
symbol: rpoS
gene_biotype: protein_coding
description:
  RNA polymerase sigma factor RpoS; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the master transcriptional regulator of the stationary phase and the general stress response.


ensembl_gene_id: LSHA_1956
symbol: surE
gene_biotype: protein_coding
description:
  Stationary phase survival protein SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.


ensembl_gene_id: LSHA_1965
symbol: Lsha_1965
gene_biotype: protein_coding
description:
  Electron transferring flavoprotein dehydrogenase; Accepts electrons from ETF and reduces ubiquinone.


ensembl_gene_id: LSHA_1967
symbol: Lsha_1967
gene_biotype: protein_coding
description:
  HlyD family transporter secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: LSHA_2018
symbol: yfcX
gene_biotype: protein_coding
description:
  Enoyl CoA hydratase; In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family.


ensembl_gene_id: LSHA_2020
symbol: Lsha_2020
gene_biotype: protein_coding
description:
  Flagellar protein; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.


ensembl_gene_id: LSHA_2021
symbol: fliN
gene_biotype: protein_coding
description:
  Flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.


ensembl_gene_id: LSHA_2023
symbol: fliP_2
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.


ensembl_gene_id: LSHA_2024
symbol: fliQ
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.


ensembl_gene_id: LSHA_2025
symbol: fliR
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein fliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family.


ensembl_gene_id: LSHA_2026
symbol: flhB-2
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family.


ensembl_gene_id: LSHA_2027
symbol: flhA
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.


ensembl_gene_id: LSHA_2030
symbol: fliA
gene_biotype: protein_coding
description:
  Flagellar biosynthesis sigma factor FliA; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes; Belongs to the sigma-70 factor family. FliA subfamily.


ensembl_gene_id: LSHA_2035
symbol: prfB
gene_biotype: protein_coding
description:
  Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.


ensembl_gene_id: LSHA_2040
symbol: Lsha_2040
gene_biotype: protein_coding
description:
  Ribonucleoside-diphosphate reductase subunit beta; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family.


ensembl_gene_id: LSHA_2041
symbol: rir1
gene_biotype: protein_coding
description:
  Ribonucleotide-diphosphate reductase subunit alpha; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen.


ensembl_gene_id: LSHA_2044
symbol: infA
gene_biotype: protein_coding
description:
  Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.


ensembl_gene_id: LSHA_2049
symbol: aat
gene_biotype: protein_coding
description:
  leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine.


ensembl_gene_id: LSHA_2052
symbol: lolA
gene_biotype: protein_coding
description:
  Outer membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).


ensembl_gene_id: LSHA_2057
symbol: fliF
gene_biotype: protein_coding
description:
  Flagellar MS-ring protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family.


ensembl_gene_id: LSHA_2058
symbol: fliG
gene_biotype: protein_coding
description:
  Flagellar motor switch protein; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.


ensembl_gene_id: LSHA_2064
symbol: mpl
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramate-L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase; Reutilizes the intact tripeptide L-alanyl-gamma-D-glutamyl- meso-diaminopimelate by linking it to UDP-N-acetylmuramate. Belongs to the MurCDEF family. Mpl subfamily.


ensembl_gene_id: LSHA_2067
symbol: clpB
gene_biotype: protein_coding
description:
  Endopeptidase Clp ATP-binding subunit B; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.


ensembl_gene_id: LSHA_2070
symbol: trmJ
gene_biotype: protein_coding
description:
  RNA methyltransferase; Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA.


ensembl_gene_id: LSHA_2076
symbol: gatB
gene_biotype: protein_coding
description:
  glutamyl-tRNA(Gln) amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily.


ensembl_gene_id: LSHA_2077
symbol: gatA
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).


ensembl_gene_id: LSHA_2078
symbol: gatC
gene_biotype: protein_coding
description:
  glutamyl/tRNA (Gln) amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.


ensembl_gene_id: LSHA_2089
symbol: aroK-2
gene_biotype: protein_coding
description:
  Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.


ensembl_gene_id: LSHA_2129
symbol: dinP
gene_biotype: protein_coding
description:
  DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.


ensembl_gene_id: LSHA_2132
symbol: ykoV
gene_biotype: protein_coding
description:
  Putative DNA repair protein YkoV; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.


ensembl_gene_id: LSHA_2138
symbol: Lsha_2138
gene_biotype: protein_coding
description:
  ABC dipeptide/oligopeptide/nickel transport, ATPase component; Belongs to the ABC transporter superfamily.


ensembl_gene_id: LSHA_2139
symbol: parE
gene_biotype: protein_coding
description:
  DNA topoisomerase IV subunit B; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 1 subfamily.


ensembl_gene_id: LSHA_2148
symbol: ant1
gene_biotype: protein_coding
description:
  Streptomycin 3''-adenylyltransferase; Mediates bacterial resistance to the antibiotics streptomycin and spectomycin.


ensembl_gene_id: LSHA_2174
symbol: Lsha_2174
gene_biotype: protein_coding
description:
  Phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase; Belongs to the UbiA prenyltransferase family.


ensembl_gene_id: LSHA_2184
symbol: ligA
gene_biotype: protein_coding
description:
  DNA ligase; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA; Belongs to the NAD-dependent DNA ligase family. LigA subfamily.


ensembl_gene_id: LSHA_2189
symbol: mfd
gene_biotype: protein_coding
description:
  Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.


ensembl_gene_id: LSHA_2195
symbol: pdxJ
gene_biotype: protein_coding
description:
  Pyridoxal phosphate biosynthetic protein PdxJ; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate.


ensembl_gene_id: LSHA_2197
symbol: era
gene_biotype: protein_coding
description:
  GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.


ensembl_gene_id: LSHA_2203
symbol: lspA
gene_biotype: protein_coding
description:
  Lipoprotein signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.


ensembl_gene_id: LSHA_2204
symbol: ileS
gene_biotype: protein_coding
description:
  isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily.


ensembl_gene_id: LSHA_2205
symbol: ribF
gene_biotype: protein_coding
description:
  Riboflavin biosynthesis protein RibF (riboflavin kinase/FMN adenylyltransferase); Belongs to the ribF family.


ensembl_gene_id: LSHA_2208
symbol: aroB
gene_biotype: protein_coding
description:
  3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).


ensembl_gene_id: LSHA_2209
symbol: aroK
gene_biotype: protein_coding
description:
  Shikimate kinase I; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.


ensembl_gene_id: LSHA_2224
symbol: pdxB
gene_biotype: protein_coding
description:
  Erythronate-4-phosphate dehydrogenase; Catalyzes the oxidation of erythronate-4-phosphate to 3- hydroxy-2-oxo-4-phosphonooxybutanoate.


ensembl_gene_id: LSHA_2254
symbol: Lsha_2254
gene_biotype: protein_coding
description:
  4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: LSHA_2262
symbol: Lsha_2262
gene_biotype: protein_coding
description:
  Ferredoxin II (4Fe-4S); Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.


ensembl_gene_id: LSHA_2266
symbol: kdsB
gene_biotype: protein_coding
description:
  3-deoxy-manno-octulosonate cytidylyltransferase; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria.


ensembl_gene_id: LSHA_2279
symbol: truD
gene_biotype: protein_coding
description:
  Hydrogenase; Responsible for synthesis of pseudouridine from uracil-13 in transfer RNAs; Belongs to the pseudouridine synthase TruD family.


ensembl_gene_id: LSHA_2282
symbol: frmA
gene_biotype: protein_coding
description:
  Alcohol dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.


ensembl_gene_id: LSHA_2289
symbol: Lsha_2289
gene_biotype: protein_coding
description:
  Carboxylate-amine ligase; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily.


ensembl_gene_id: LSHA_2297
symbol: uvrB
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate  [...]


ensembl_gene_id: LSHA_2300
symbol: zapA
gene_biotype: protein_coding
description:
  Cell division protein ZapA; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.


ensembl_gene_id: LSHA_2308
symbol: tpm
gene_biotype: protein_coding
description:
  Thiopurine S-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. TPMT family.


ensembl_gene_id: LSHA_2309
symbol: glmS
gene_biotype: protein_coding
description:
  Glucosamine--fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.


ensembl_gene_id: LSHA_2313
symbol: smpB
gene_biotype: protein_coding
description:
  Trans-translation protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switch [...]


ensembl_gene_id: LSHA_2344
symbol: Lsha_2344
gene_biotype: protein_coding
description:
  tRNA-dihydrouridine synthase B; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.


ensembl_gene_id: LSHA_2348
symbol: priA
gene_biotype: protein_coding
description:
  Primosomal protein N' (replication factor Y); Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.


ensembl_gene_id: LSHA_2350
symbol: thyA
gene_biotype: protein_coding
description:
  Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis.


ensembl_gene_id: LSHA_2351
symbol: lgt
gene_biotype: protein_coding
description:
  Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.


ensembl_gene_id: LSHA_2354
symbol: rppH
gene_biotype: protein_coding
description:
  Dinucleoside polyphosphate hydrolase; Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage; Belongs to the Nudix hydrolase family. RppH subfamily.


ensembl_gene_id: LSHA_2358
symbol: glmU
gene_biotype: protein_coding
description:
  Glucosamine-1-phosphate N-acetyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain.


ensembl_gene_id: LSHA_2363
symbol: corA
gene_biotype: protein_coding
description:
  Cobalt/magnesium uptake transporter; Mediates influx of magnesium ions. Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.


ensembl_gene_id: LSHA_2365
symbol: nth
gene_biotype: protein_coding
description:
  Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.


ensembl_gene_id: LSHA_2366
symbol: rnfB
gene_biotype: protein_coding
description:
  Electron transport complex protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.


ensembl_gene_id: LSHA_2367
symbol: metG
gene_biotype: protein_coding
description:
  Methionyl tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.


ensembl_gene_id: LSHA_2370
symbol: queC
gene_biotype: protein_coding
description:
  ExsB protein; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Belongs to the QueC family.


ensembl_gene_id: LSHA_2371
symbol: cpsB
gene_biotype: protein_coding
description:
  Mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.


ensembl_gene_id: LSHA_2393
symbol: gidA
gene_biotype: protein_coding
description:
  Glucose-inhibited division protein A; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.


ensembl_gene_id: LSHA_2394
symbol: gidB
gene_biotype: protein_coding
description:
  Glucose inhibited division protein B GidB; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA.


ensembl_gene_id: LSHA_2408
symbol: coxA
gene_biotype: protein_coding
description:
  Cytochrome c oxidase subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.


ensembl_gene_id: LSHA_2409
symbol: coxB
gene_biotype: protein_coding
description:
  Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).


ensembl_gene_id: LSHA_2423
symbol: ubiE
gene_biotype: protein_coding
description:
  Ubiquinone/menaquinone biosynthesis methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2).


ensembl_gene_id: LSHA_2426
symbol: ubiB
gene_biotype: protein_coding
description:
  Hypothetical protein; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis.


ensembl_gene_id: LSHA_2427
symbol: tatA
gene_biotype: protein_coding
description:
  TatA protein(twin arginine translocation); Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.


ensembl_gene_id: LSHA_2430
symbol: msrA
gene_biotype: protein_coding
description:
  Bifunctional methionine sulfoxide reductase B/A protein; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.


ensembl_gene_id: LSHA_2451
symbol: def-2
gene_biotype: protein_coding
description:
  Polypeptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.


ensembl_gene_id: LSHA_2458
symbol: rlpA_2
gene_biotype: protein_coding
description:
  Lipoprotein; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.


ensembl_gene_id: LSHA_2460
symbol: Lsha_2460
gene_biotype: protein_coding
description:
  Oxidoreductase, 2OG-Fe(II) oxygenase family; Belongs to the iron/ascorbate-dependent oxidoreductase family.


ensembl_gene_id: LSHA_2475
symbol: fni
gene_biotype: protein_coding
description:
  Isopentenyl pyrophosphate isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).


ensembl_gene_id: LSHA_2482
symbol: pal
gene_biotype: protein_coding
description:
  Peptidoglycan-associated lipoprotein precursor (19 kDa surface antigen) (PPL); Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.


ensembl_gene_id: LSHA_2483
symbol: cpoB
gene_biotype: protein_coding
description:
  Outer membrane protein; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family.


ensembl_gene_id: LSHA_2486
symbol: ftsB
gene_biotype: protein_coding
description:
  Septum formation initiator; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic.


ensembl_gene_id: LSHA_2488
symbol: mnmA
gene_biotype: protein_coding
description:
  tRNA-specific 2-thiouridylase MnmA; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.


ensembl_gene_id: LSHA_2489
symbol: yadR
gene_biotype: protein_coding
description:
  Putative chaperone involved in Fe-S cluster assembly and activation, hesB-like protein; Required for insertion of 4Fe-4S clusters for at least IspG.


ensembl_gene_id: LSHA_2513
symbol: artJ_4
gene_biotype: protein_coding
description:
  Arginine 3rd transport system periplasmic binding protein; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: LSHA_2518
symbol: queE
gene_biotype: protein_coding
description:
  Radical activating enzyme; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds.


ensembl_gene_id: LSHA_2535
symbol: Lsha_2535
gene_biotype: protein_coding
description:
  Membrane protein; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage; Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily.


ensembl_gene_id: LSHA_2552
symbol: mscL
gene_biotype: protein_coding
description:
  Mechanosensitive ion channel MscS; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell.


ensembl_gene_id: LSHA_2553
symbol: alaS
gene_biotype: protein_coding
description:
  alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.


ensembl_gene_id: LSHA_2555
symbol: recA
gene_biotype: protein_coding
description:
  Recombinase A; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.


ensembl_gene_id: LSHA_2567
symbol: Lsha_2567
gene_biotype: protein_coding
description:
  Arginine ABC transporter substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: LSHA_2568
symbol: Lsha_2568
gene_biotype: protein_coding
description:
  Adenylyl transferase; Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB [...]


ensembl_gene_id: LSHA_2569
symbol: rimO
gene_biotype: protein_coding
description:
  Ribosomal protein S12 methylthiotransferase; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.


ensembl_gene_id: LSHA_2575
symbol: Lsha_2575
gene_biotype: protein_coding
description:
  NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source.


ensembl_gene_id: LSHA_2580
symbol: groES
gene_biotype: protein_coding
description:
  Co-chaperonin GroES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.


ensembl_gene_id: LSHA_2581
symbol: htpB
gene_biotype: protein_coding
description:
  Molecular chaperone GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.


ensembl_gene_id: LSHA_2599
symbol: lolD
gene_biotype: protein_coding
description:
  ABC transporter ATP binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner.


ensembl_gene_id: LSHA_2610
symbol: pgsA
gene_biotype: protein_coding
description:
  CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: LSHA_2612
symbol: rluC
gene_biotype: protein_coding
description:
  Ribosomal large subunit pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: LSHA_2620
symbol: hepA
gene_biotype: protein_coding
description:
  RNA polymerase-associated protein HepA; Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair; Belongs to the SNF2/RAD54 helicase family. RapA subfamily.


ensembl_gene_id: LSHA_2627
symbol: asd
gene_biotype: protein_coding
description:
  Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.


ensembl_gene_id: LSHA_2628
symbol: aroC
gene_biotype: protein_coding
description:
  Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.


ensembl_gene_id: LSHA_2629
symbol: prmB
gene_biotype: protein_coding
description:
  N5-glutamine methyltransferase; Specifically methylates the 50S ribosomal protein L3 on a specific glutamine residue; Belongs to the protein N5-glutamine methyltransferase family. PrmB subfamily.


ensembl_gene_id: LSHA_2632
symbol: grx
gene_biotype: protein_coding
description:
  Glutaredoxin Grx; Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins.


ensembl_gene_id: LSHA_2633
symbol: secB
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecB; One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA.


ensembl_gene_id: LSHA_2634
symbol: gpsA
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate dehydrogenase (NAD(P)+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: LSHA_2641
symbol: dapA
gene_biotype: protein_coding
description:
  Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).


ensembl_gene_id: LSHA_2645
symbol: adc
gene_biotype: protein_coding
description:
  Acetoacetate decarboxylase; Catalyzes the conversion of acetoacetate to acetone and carbon dioxide; Belongs to the ADC family.


ensembl_gene_id: LSHA_2654
symbol: radA
gene_biotype: protein_coding
description:
  DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.


ensembl_gene_id: LSHA_2655
symbol: xseB
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.


ensembl_gene_id: LSHA_2659
symbol: bioC
gene_biotype: protein_coding
description:
  Biotin synthase BioC; Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl-L- methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway.


ensembl_gene_id: LSHA_2664
symbol: prfA
gene_biotype: protein_coding
description:
  Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.


ensembl_gene_id: LSHA_2665
symbol: hemK
gene_biotype: protein_coding
description:
  Protein methyltransferase HemK; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.


ensembl_gene_id: LSHA_2666
symbol: dksA
gene_biotype: protein_coding
description:
  DnaK suppressor protein; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. Also required for regulation of fis expression.


ensembl_gene_id: LSHA_2668
symbol: Lsha_2668
gene_biotype: protein_coding
description:
  3-deoxy-D-manno-oct-2-ulosonic acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family.


ensembl_gene_id: LSHA_2669
symbol: djlA
gene_biotype: protein_coding
description:
  DNA binding protein DnaJ, heat shock protein; Regulatory DnaK co-chaperone. Direct interaction between DnaK and DjlA is needed for the induction of the wcaABCDE operon, involved in the synthesis of a colanic acid polysaccharide capsule, possibly through activation of the RcsB/RcsC phosphotransfer signaling pathway. The colanic acid capsule may help the bacterium survive conditions outside the host.


ensembl_gene_id: LSHA_2677
symbol: deaD
gene_biotype: protein_coding
description:
  ATP-dependent RNA helicase; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation.


ensembl_gene_id: LSHA_2681
symbol: sodC
gene_biotype: protein_coding
description:
  Superoxide dismutase [Cu-Zn] precursor; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.


ensembl_gene_id: LSHA_2683
symbol: ahpD
gene_biotype: protein_coding
description:
  Alkylhydroperoxidase; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.


ensembl_gene_id: LSHA_2686
symbol: mdh
gene_biotype: protein_coding
description:
  Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family.


ensembl_gene_id: LSHA_2688
symbol: hemN
gene_biotype: protein_coding
description:
  Oxygen-independent coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: LSHA_2689
symbol: plsY
gene_biotype: protein_coding
description:
  Transmembrane protein; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.


ensembl_gene_id: LSHA_2690
symbol: gcp
gene_biotype: protein_coding
description:
  DNA-binding/iron metalloprotein/AP endonuclease; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.


ensembl_gene_id: LSHA_2693
symbol: dnaG
gene_biotype: protein_coding
description:
  DNA primase DnaG; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.


ensembl_gene_id: LSHA_2694
symbol: rpoD
gene_biotype: protein_coding
description:
  RNA polymerase sigma 70 factor (RpoD); Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.


ensembl_gene_id: LSHA_2708
symbol: vsr
gene_biotype: protein_coding
description:
  Patch repair protein; May nick specific sequences that contain T:G mispairs resulting from m5C-deamination.


ensembl_gene_id: LSHA_2713
symbol: csrA
gene_biotype: protein_coding
description:
  Global regulator; A key translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Mediates global changes in gene expression, shifting from rapid growth to stress survival by linking envelope stress, the stringent response and the catabolite repression systems. Usually binds in the 5'-UTR; binding at or near the Shine-Dalgarno sequence prevents ribosome-binding, repressing translation, binding elsewhere in the 5'-UTR can activate translation and/or stabilize the mRNA. Its function is antagonized by small RNA(s).


ensembl_gene_id: LSHA_2731
symbol: ceaB
gene_biotype: protein_coding
description:
  Chemiosmotic efflux system protein B-like protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: LSHA_2769
symbol: proS
gene_biotype: protein_coding
description:
  prolyl-tRNA synthase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacy [...]


ensembl_gene_id: LSHA_2772
symbol: ydaO
gene_biotype: protein_coding
description:
  C32 tRNA thiolase; Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine/cysteine desulfurase (IscS) system.


ensembl_gene_id: LSHA_2775
symbol: kbl
gene_biotype: protein_coding
description:
  2-amino-3-ketobutyrate coenzyme A ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA.


ensembl_gene_id: LSHA_2776
symbol: tdh
gene_biotype: protein_coding
description:
  Threonine(-3-)dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-threonine to 2- amino-3-ketobutyrate; Belongs to the zinc-containing alcohol dehydrogenase family.


ensembl_gene_id: LSHA_2782
symbol: hutG_2
gene_biotype: protein_coding
description:
  Formimidoylglutamase; Catalyzes the conversion of N-formimidoyl-L-glutamate to L- glutamate and formamide; Belongs to the arginase family.


ensembl_gene_id: LSHA_2802
symbol: hslU
gene_biotype: protein_coding
description:
  ATP-dependent protease ATP-binding subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis.


ensembl_gene_id: LSHA_2803
symbol: hslV
gene_biotype: protein_coding
description:
  Detoxification / adaptation, Protein fate / hydrolases / secretion; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery.


ensembl_gene_id: LSHA_2804
symbol: deoB
gene_biotype: protein_coding
description:
  Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family.


ensembl_gene_id: LSHA_2824
symbol: yihE
gene_biotype: protein_coding
description:
  Kinase; A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response.


ensembl_gene_id: LSHA_2831
symbol: azoR
gene_biotype: protein_coding
description:
  ACP phosphodiesterase; Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family.


ensembl_gene_id: LSHA_2885
symbol: pyrB
gene_biotype: protein_coding
description:
  Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.


ensembl_gene_id: LSHA_2886
symbol: yqgF
gene_biotype: protein_coding
description:
  Holliday junction resolvase-like protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.


ensembl_gene_id: LSHA_2895
symbol: fusA_2
gene_biotype: protein_coding
description:
  Chain elongation factor EF-G, GTP-binding protein; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase f [...]


# pathwayInfo

id: CL:1009
description: Aspartate family amino acid biosynthetic process, and Arginine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1009_Aspartate_family_amino_acid_biosynthetic_process,_and_Arginine_biosynthesis


id: CL:1010
description: Arginine biosynthesis, and Monobactam biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1010_Arginine_biosynthesis,_and_Monobactam_biosynthesis


id: CL:1033
description: Threonine biosynthetic process, and Cysteine biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1033_Threonine_biosynthetic_process,_and_Cysteine_biosynthetic_process


id: CL:1053
description: Nucleoside monophosphate biosynthetic process, and Glycine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1053_Nucleoside_monophosphate_biosynthetic_process,_and_Glycine_metabolic_process


id: CL:1054
description: Nucleoside monophosphate biosynthetic process, and Ribonucleoside-diphosphate reductase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1054_Nucleoside_monophosphate_biosynthetic_process,_and_Ribonucleoside-diphosphate_reductase_activity


id: CL:1056
description: Ribonucleoside monophosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1056_Ribonucleoside_monophosphate_biosynthetic_process


id: CL:1057
description: De novo IMP biosynthetic process, and De novo UMP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1057_De_novo_IMP_biosynthetic_process,_and_De_novo_UMP_biosynthetic_process


id: CL:1058
description: De novo IMP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1058_De_novo_IMP_biosynthetic_process


id: CL:1060
description: De novo IMP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1060_De_novo_IMP_biosynthetic_process


id: CL:1080
description: De novo UMP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1080_De_novo_UMP_biosynthetic_process


id: CL:1093
description: GMP biosynthesis, and GMP reductase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1093_GMP_biosynthesis,_and_GMP_reductase_complex


id: CL:1109
description: Deoxyribonucleoside triphosphate biosynthetic process, and DNA synthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1109_Deoxyribonucleoside_triphosphate_biosynthetic_process,_and_DNA_synthesis


id: CL:1125
description: Mixed, incl. Glycine catabolic process, and Tetrahydrofolate interconversion
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1125_Mixed,_incl._Glycine_catabolic_process,_and_Tetrahydrofolate_interconversion


id: CL:1129
description: Glycine catabolic process, and Tetrahydrofolate interconversion
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1129_Glycine_catabolic_process,_and_Tetrahydrofolate_interconversion


id: CL:1148
description: Vitamin biosynthetic process, and Pyridine nucleotide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1148_Vitamin_biosynthetic_process,_and_Pyridine_nucleotide_biosynthetic_process


id: CL:1149
description: Pyridine-containing compound biosynthetic process, and Riboflavin metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1149_Pyridine-containing_compound_biosynthetic_process,_and_Riboflavin_metabolic_process


id: CL:1150
description: Riboflavin metabolic process, and Tetrahydrofolate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1150_Riboflavin_metabolic_process,_and_Tetrahydrofolate_biosynthetic_process


id: CL:1152
description: Riboflavin metabolic process, and Tetrahydrofolate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1152_Riboflavin_metabolic_process,_and_Tetrahydrofolate_biosynthetic_process


id: CL:1164
description: Tetrahydrofolate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1164_Tetrahydrofolate_biosynthetic_process


id: CL:1183
description: Pyridine nucleotide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1183_Pyridine_nucleotide_biosynthetic_process


id: CL:1199
description: Pantothenate biosynthesis, and AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1199_Pantothenate_biosynthesis,_and_AAA_domain


id: CL:1213
description: Mixed, incl. dUTPase, and Flavoprotein
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1213_Mixed,_incl._dUTPase,_and_Flavoprotein


id: CL:1231
description: Mixed, incl. Carbon metabolism, and Fatty acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1231_Mixed,_incl._Carbon_metabolism,_and_Fatty_acid_metabolic_process


id: CL:1232
description: Mixed, incl. Carbon metabolism, and Fatty acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1232_Mixed,_incl._Carbon_metabolism,_and_Fatty_acid_metabolic_process


id: CL:1233
description: Mixed, incl. Fatty acid metabolic process, and Carbon metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1233_Mixed,_incl._Fatty_acid_metabolic_process,_and_Carbon_metabolism


id: CL:1234
description: Mixed, incl. Fatty acid metabolic process, and Carbon metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1234_Mixed,_incl._Fatty_acid_metabolic_process,_and_Carbon_metabolism


id: CL:1235
description: Mixed, incl. Fatty acid metabolic process, and Citrate cycle (TCA cycle)
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1235_Mixed,_incl._Fatty_acid_metabolic_process,_and_Citrate_cycle_(TCA_cycle)


id: CL:1236
description: Mixed, incl. Fatty acid metabolic process, and Citrate cycle (TCA cycle)
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1236_Mixed,_incl._Fatty_acid_metabolic_process,_and_Citrate_cycle_(TCA_cycle)


id: CL:1237
description: Mixed, incl. Fatty acid metabolism, and Phosphopantetheine
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1237_Mixed,_incl._Fatty_acid_metabolism,_and_Phosphopantetheine


id: CL:1238
description: Mixed, incl. Fatty acid biosynthesis, and Phosphopantetheine
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1238_Mixed,_incl._Fatty_acid_biosynthesis,_and_Phosphopantetheine


id: CL:1239
description: Fatty acid biosynthetic process, and Phosphopantetheine binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1239_Fatty_acid_biosynthetic_process,_and_Phosphopantetheine_binding


id: CL:1241
description: Fatty acid biosynthetic process, and Phosphopantetheine binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1241_Fatty_acid_biosynthetic_process,_and_Phosphopantetheine_binding


id: CL:1243
description: Fatty acid biosynthetic process, and Phosphopantetheine binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1243_Fatty_acid_biosynthetic_process,_and_Phosphopantetheine_binding


id: CL:1244
description: Beta-ketoacyl synthase, C-terminal, and Fatty acid biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1244_Beta-ketoacyl_synthase,_C-terminal,_and_Fatty_acid_biosynthetic_process


id: CL:1247
description: Beta-ketoacyl synthase, C-terminal, and Phosphopantetheine binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1247_Beta-ketoacyl_synthase,_C-terminal,_and_Phosphopantetheine_binding


id: CL:1249
description: Beta-ketoacyl synthase, C-terminal, and Acyl transferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1249_Beta-ketoacyl_synthase,_C-terminal,_and_Acyl_transferase_domain


id: CL:1251
description: Amino acid adenylation domain, and Condensation domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1251_Amino_acid_adenylation_domain,_and_Condensation_domain


id: CL:1287
description: Beta-ketoacyl synthase, and FabA-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1287_Beta-ketoacyl_synthase,_and_FabA-like_domain


id: CL:1298
description: acetyl-CoA carboxylase activity, and Biotin-binding site
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1298_acetyl-CoA_carboxylase_activity,_and_Biotin-binding_site


id: CL:1331
description: AMP-binding, conserved site, and Serine aminopeptidase, S33
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1331_AMP-binding,_conserved_site,_and_Serine_aminopeptidase,_S33


id: CL:1348
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1348_Valine,_leucine_and_isoleucine_degradation,_and_Acyl-CoA_oxidase/dehydrogenase,_middle_domain_superfamily

description:
  Valine, leucine and isoleucine degradation, and Acyl-CoA oxidase/dehydrogenase, middle domain superfamily


id: CL:1350
description: Lipid oxidation, and acyl-CoA dehydrogenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1350_Lipid_oxidation,_and_acyl-CoA_dehydrogenase_activity


id: CL:1385
description: Leucine catabolic process, and Enoyl-CoA hydratase, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1385_Leucine_catabolic_process,_and_Enoyl-CoA_hydratase,_C-terminal


id: CL:1396
description: Mixed, incl. Citrate cycle (TCA cycle), and Propanoate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1396_Mixed,_incl._Citrate_cycle_(TCA_cycle),_and_Propanoate_metabolism


id: CL:1398
description: Citrate cycle (TCA cycle), and Propionate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1398_Citrate_cycle_(TCA_cycle),_and_Propionate_metabolic_process


id: CL:1420
description: Propionate metabolic process, and Citrate synthase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1420_Propionate_metabolic_process,_and_Citrate_synthase


id: CL:1436
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1436_Mixed,_incl._Thiamin_diphosphate-binding_fold,_and_Pyridine_nucleotide-disulphide_oxidoreductase,_class_I

description:
  Mixed, incl. Thiamin diphosphate-binding fold, and Pyridine nucleotide-disulphide oxidoreductase, class I


id: CL:1438
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1438_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_disulfide_as_acceptor,_and_Glutathione_disulfide_oxidoreductase_activity

description:
  Oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor, and Glutathione disulfide oxidoreductase activity


id: CL:1462
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1462_Mixed,_incl._Aldehyde_dehydrogenase,_cysteine_active_site,_and_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors

description:
  Mixed, incl. Aldehyde dehydrogenase, cysteine active site, and Oxidoreductase activity, acting on the CH-NH2 group of donors


id: CL:1463
description: Mixed, incl. Ureohydrolase, and Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1463_Mixed,_incl._Ureohydrolase,_and_Glu/Leu/Phe/Val_dehydrogenase,_dimerisation_domain


id: CL:1465
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1465_Glu/Leu/Phe/Val_dehydrogenase,_dimerisation_domain,_and_NADH:flavin_oxidoreductase_/_NADH_oxidase_family

description:
  Glu/Leu/Phe/Val dehydrogenase, dimerisation domain, and NADH:flavin oxidoreductase / NADH oxidase family


id: CL:1484
description: Thymine catabolic process, and MarR-type HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1484_Thymine_catabolic_process,_and_MarR-type_HTH_domain


id: CL:1493
description: Mixed, incl. Alcohol dehydrogenase-like, N-terminal, and Epoxide hydrolase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1493_Mixed,_incl._Alcohol_dehydrogenase-like,_N-terminal,_and_Epoxide_hydrolase-like


id: CL:1495
description: Alcohol dehydrogenase-like, N-terminal, and Serine esterase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1495_Alcohol_dehydrogenase-like,_N-terminal,_and_Serine_esterase


id: CL:1515
description: acetyl-CoA biosynthetic process, and Chaperone DnaJ, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1515_acetyl-CoA_biosynthetic_process,_and_Chaperone_DnaJ,_C-terminal


id: CL:1525
description: KR domain, and Xenobiotic export from cell
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1525_KR_domain,_and_Xenobiotic_export_from_cell


id: CL:1536
description: Pentose phosphate pathway, and Glycolysis
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1536_Pentose_phosphate_pathway,_and_Glycolysis


id: CL:1537
description: Pentose phosphate pathway, and Glycolysis
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1537_Pentose_phosphate_pathway,_and_Glycolysis


id: CL:1538
description: Glycolytic process, and Pentose-phosphate shunt, non-oxidative branch
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1538_Glycolytic_process,_and_Pentose-phosphate_shunt,_non-oxidative_branch


id: CL:1562
description: Glucose 6-phosphate metabolic process, and KDPG/KHG aldolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1562_Glucose_6-phosphate_metabolic_process,_and_KDPG/KHG_aldolase


id: CL:1575
description: Mixed, incl. Nucleotide-diphospho-sugar transferases, and SIS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1575_Mixed,_incl._Nucleotide-diphospho-sugar_transferases,_and_SIS_domain


id: CL:1593
description: Acetoacetyl-CoA reductase, and Poly-hydroxybutyrate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1593_Acetoacetyl-CoA_reductase,_and_Poly-hydroxybutyrate_metabolic_process


id: CL:1606
description: Oxidative phosphorylation, and Protein repair
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1606_Oxidative_phosphorylation,_and_Protein_repair


id: CL:1608
description: Oxidative phosphorylation, and Protein repair
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1608_Oxidative_phosphorylation,_and_Protein_repair


id: CL:1609
description: Oxidative phosphorylation, and Protein repair
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1609_Oxidative_phosphorylation,_and_Protein_repair


id: CL:1611
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1611_Oxidoreductase_activity,_acting_on_NAD(P)H,_quinone_or_similar_compound_as_acceptor,_and_Peptidase_M16,_C-terminal

description:
  Oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor, and Peptidase M16, C-terminal


id: CL:1614
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1614_Oxidoreductase_activity,_acting_on_NAD(P)H,_quinone_or_similar_compound_as_acceptor,_and_Metallochaperone_activity

description:
  Oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor, and Metallochaperone activity


id: CL:1615
description: Oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1615_Oxidoreductase_activity,_acting_on_NAD(P)H,_quinone_or_similar_compound_as_acceptor


id: CL:1638
description: Metallochaperone activity, and Quinone
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1638_Metallochaperone_activity,_and_Quinone


id: CL:1655
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1655_Mixed,_incl._Cytochrome_c-like_domain,_and_Oxidoreductase_activity,_acting_on_diphenols_and_related_substances_as_donors

description:
  Mixed, incl. Cytochrome c-like domain, and Oxidoreductase activity, acting on diphenols and related substances as donors


id: CL:1656
description: Cytochrome c-like domain, and Cytochrome bo3 ubiquinol oxidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1656_Cytochrome_c-like_domain,_and_Cytochrome_bo3_ubiquinol_oxidase_activity


id: CL:166
description: Gene expression, and Protein export
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:166_Gene_expression,_and_Protein_export


id: CL:1660
description: Respiratory chain, and Rieske [2Fe-2S] domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1660_Respiratory_chain,_and_Rieske_[2Fe-2S]_domain


id: CL:167
description: Gene expression, and Protein export
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:167_Gene_expression,_and_Protein_export


id: CL:1679
description: Mixed, incl. Regulation of transmembrane transport, and UbiA prenyltransferase conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1679_Mixed,_incl._Regulation_of_transmembrane_transport,_and_UbiA_prenyltransferase_conserved_site


id: CL:168
description: Gene expression, and Protein export
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:168_Gene_expression,_and_Protein_export


id: CL:169
description: Translation, and Ribosome biogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:169_Translation,_and_Ribosome_biogenesis


id: CL:1690
description: Aerobic electron transport chain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1690_Aerobic_electron_transport_chain


id: CL:171
description: Translation, and Ribosome biogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:171_Translation,_and_Ribosome_biogenesis


id: CL:1710
description: Mixed, incl. Histidine metabolism, and DNA replication proofreading
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1710_Mixed,_incl._Histidine_metabolism,_and_DNA_replication_proofreading


id: CL:1729
description: Mixed, incl. Nucleotidase activity, and FMN-dependent dehydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1729_Mixed,_incl._Nucleotidase_activity,_and_FMN-dependent_dehydrogenase


id: CL:1743
description: Mixed, incl. Thioredoxin-like superfamily, and Cytochrome complex assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1743_Mixed,_incl._Thioredoxin-like_superfamily,_and_Cytochrome_complex_assembly


id: CL:1744
description: Mixed, incl. Thioredoxin-like superfamily, and Cytochrome complex assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1744_Mixed,_incl._Thioredoxin-like_superfamily,_and_Cytochrome_complex_assembly


id: CL:1745
description: Mixed, incl. Cytochrome complex assembly, and Thioredoxin domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1745_Mixed,_incl._Cytochrome_complex_assembly,_and_Thioredoxin_domain


id: CL:1746
description: Mixed, incl. Thioredoxin domain, and Response to superoxide
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1746_Mixed,_incl._Thioredoxin_domain,_and_Response_to_superoxide


id: CL:1748
description: Thioredoxin domain, and Response to superoxide
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1748_Thioredoxin_domain,_and_Response_to_superoxide


id: CL:175
description: Mixed, incl. Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:175_Mixed,_incl._Ribosome,_and_Translation_regulator_activity


id: CL:1751
description: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant, and Thioredoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1751_Alkyl_hydroperoxide_reductase_subunit_C/_Thiol_specific_antioxidant,_and_Thioredoxin


id: CL:176
description: Mixed, incl. Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:176_Mixed,_incl._Ribosome,_and_Translation_regulator_activity


id: CL:1760
description: Thioredoxin-like, and DSBA-like thioredoxin domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1760_Thioredoxin-like,_and_DSBA-like_thioredoxin_domain


id: CL:178
description: Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:178_Ribosome,_and_Translation_regulator_activity


id: CL:179
description: Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:179_Ribosome,_and_Translation_regulator_activity


id: CL:180
description: Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:180_Ribosome,_and_Translation_regulator_activity


id: CL:1809
description: Glutathione metabolic process, and Coenzyme A biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1809_Glutathione_metabolic_process,_and_Coenzyme_A_biosynthesis


id: CL:1827
description: Ferric-uptake regulator, and CoA-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1827_Ferric-uptake_regulator,_and_CoA-binding


id: CL:183
description: Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:183_Ribosome,_and_Translation_regulator_activity


id: CL:1836
description: Mixed, incl. Regulation of cell shape, and Cell division
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1836_Mixed,_incl._Regulation_of_cell_shape,_and_Cell_division


id: CL:1837
description: Mixed, incl. Regulation of cell shape, and Cell division site
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1837_Mixed,_incl._Regulation_of_cell_shape,_and_Cell_division_site


id: CL:1839
description: Mixed, incl. Regulation of cell shape, and Cell division site
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1839_Mixed,_incl._Regulation_of_cell_shape,_and_Cell_division_site


id: CL:1841
description: Regulation of cell shape, and Cell division site
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1841_Regulation_of_cell_shape,_and_Cell_division_site


id: CL:1842
description: Regulation of cell shape, and Reproduction
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1842_Regulation_of_cell_shape,_and_Reproduction


id: CL:1846
description: Peptidoglycan synthesis, and Reproduction
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1846_Peptidoglycan_synthesis,_and_Reproduction


id: CL:186
description: Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:186_Ribosome,_and_Translation_regulator_activity


id: CL:1883
description: Mixed, incl. Cell cycle protein, and Penicillin-binding Protein dimerisation domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1883_Mixed,_incl._Cell_cycle_protein,_and_Penicillin-binding_Protein_dimerisation_domain


id: CL:1901
description: Mixed, incl. Peptidase M23, and AMIN domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1901_Mixed,_incl._Peptidase_M23,_and_AMIN_domain


id: CL:1902
description: Mixed, incl. Peptidase M48, and ABC-type amino acid transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1902_Mixed,_incl._Peptidase_M48,_and_ABC-type_amino_acid_transporter_activity


id: CL:1939
description: Mixed, incl. DedA family, and Rare lipoprotein A
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1939_Mixed,_incl._DedA_family,_and_Rare_lipoprotein_A


id: CL:1954
description: Mostly uncharacterized, incl. Peptidase S1C, and Regulation of pH
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1954_Mostly_uncharacterized,_incl._Peptidase_S1C,_and_Regulation_of_pH


id: CL:1955
description: Mixed, incl. Peptidase S1C, and Regulation of pH
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1955_Mixed,_incl._Peptidase_S1C,_and_Regulation_of_pH


id: CL:1968
description: Mixed, incl. Proline metabolic process, and Alanine racemase, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1968_Mixed,_incl._Proline_metabolic_process,_and_Alanine_racemase,_N-terminal


id: CL:1978
description: Mixed, incl. Ribonuclease H superfamily, and Cation efflux family
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1978_Mixed,_incl._Ribonuclease_H_superfamily,_and_Cation_efflux_family


id: CL:1992
description: Mixed, incl. Cilium, and Signal transduction
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1992_Mixed,_incl._Cilium,_and_Signal_transduction


id: CL:1993
description: Mixed, incl. Cilium, and Signal transduction
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1993_Mixed,_incl._Cilium,_and_Signal_transduction


id: CL:1995
description: Mixed, incl. Cilium, and Signal transduction
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1995_Mixed,_incl._Cilium,_and_Signal_transduction


id: CL:1997
description: Mixed, incl. Cilium, and Signal transduction
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1997_Mixed,_incl._Cilium,_and_Signal_transduction


id: CL:1998
description: Cilium, and Signal transduction
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:1998_Cilium,_and_Signal_transduction


id: CL:2000
description: Cilium, and Signal transduction
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2000_Cilium,_and_Signal_transduction


id: CL:2001
description: Cilium, and Signal transduction
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2001_Cilium,_and_Signal_transduction


id: CL:2003
description: Signal transduction, and Diguanylate cyclase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2003_Signal_transduction,_and_Diguanylate_cyclase


id: CL:2005
description: Signal transduction, and Diguanylate cyclase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2005_Signal_transduction,_and_Diguanylate_cyclase_activity


id: CL:2008
description: Signal transduction, and Diguanylate cyclase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2008_Signal_transduction,_and_Diguanylate_cyclase_activity


id: CL:2012
description: Phosphorelay signal transduction system
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2012_Phosphorelay_signal_transduction_system


id: CL:2015
description: Protein histidine kinase activity, and Transcriptional regulatory protein WalR-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2015_Protein_histidine_kinase_activity,_and_Transcriptional_regulatory_protein_WalR-like


id: CL:2019
description: PAS domain superfamily, and GAF-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2019_PAS_domain_superfamily,_and_GAF-like_domain_superfamily


id: CL:2025
description: PAS fold-4, and OmpR/PhoB-type DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2025_PAS_fold-4,_and_OmpR/PhoB-type_DNA-binding_domain


id: CL:2099
description: Two-component regulatory system, and AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2099_Two-component_regulatory_system,_and_AAA_domain


id: CL:2115
description: Bacterial-type flagellum basal body, and Bacterial flagellum biogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2115_Bacterial-type_flagellum_basal_body,_and_Bacterial_flagellum_biogenesis


id: CL:2119
description: Bacterial-type flagellum basal body, rod, and Flagellar hook-basal body protein, FlgE/F/G
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2119_Bacterial-type_flagellum_basal_body,_rod,_and_Flagellar_hook-basal_body_protein,_FlgE/F/G


id: CL:2121
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2121_Bacterial-type_flagellum_basal_body,_distal_rod,_and_Mannosyl-glycoprotein_endo-beta-N-acetylglucosaminidase

description:
  Bacterial-type flagellum basal body, distal rod, and Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase


id: CL:2143
description: Bacterial-type flagellum basal body
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2143_Bacterial-type_flagellum_basal_body


id: CL:2145
description: Bacterial flagellum protein export, and Bacterial-type flagellum assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2145_Bacterial_flagellum_protein_export,_and_Bacterial-type_flagellum_assembly


id: CL:2169
description: Secreted, and Sigma-70 region 3
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2169_Secreted,_and_Sigma-70_region_3


id: CL:2190
description: Synthesis and degradation of ketone bodies, and Ether lipid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2190_Synthesis_and_degradation_of_ketone_bodies,_and_Ether_lipid_metabolism


id: CL:2208
description: Mixed, incl. Condensation domain, and Diguanylate cyclase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2208_Mixed,_incl._Condensation_domain,_and_Diguanylate_cyclase_activity


id: CL:2221
description: Bacterial periplasmic substrate-binding proteins, and ABC-type amino acid transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2221_Bacterial_periplasmic_substrate-binding_proteins,_and_ABC-type_amino_acid_transporter_activity


id: CL:2223
description: Bacterial periplasmic substrate-binding proteins
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2223_Bacterial_periplasmic_substrate-binding_proteins


id: CL:2228
description: Bacterial periplasmic substrate-binding proteins, and ABC-type amino acid transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2228_Bacterial_periplasmic_substrate-binding_proteins,_and_ABC-type_amino_acid_transporter_activity


id: CL:2270
description: Mixed, incl. Protein kinase domain, and Phosphatidic acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2270_Mixed,_incl._Protein_kinase_domain,_and_Phosphatidic_acid_metabolic_process


id: CL:2271
description: Mixed, incl. Antibiotic resistance, and HotDog domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2271_Mixed,_incl._Antibiotic_resistance,_and_HotDog_domain_superfamily


id: CL:2282
description: Serine/threonine-protein kinase, active site, and Phosphatidic acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2282_Serine/threonine-protein_kinase,_active_site,_and_Phosphatidic_acid_metabolic_process


id: CL:2292
description: Mixed, incl. tRNA threonylcarbamoyladenosine modification, and Chromatin
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2292_Mixed,_incl._tRNA_threonylcarbamoyladenosine_modification,_and_Chromatin


id: CL:2293
description: Mixed, incl. tRNA threonylcarbamoyladenosine modification, and Regulation of catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2293_Mixed,_incl._tRNA_threonylcarbamoyladenosine_modification,_and_Regulation_of_catabolic_process


id: CL:2294
description: tRNA threonylcarbamoyladenosine modification, and Kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2294_tRNA_threonylcarbamoyladenosine_modification,_and_Kinase


id: CL:2305
description: Mixed, incl. Regulation of catabolic process, and Glutathione S-transferase, N-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2305_Mixed,_incl._Regulation_of_catabolic_process,_and_Glutathione_S-transferase,_N-terminal_domain


id: CL:2314
description: Chromatin, and tRNA-dihydrouridine synthase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2314_Chromatin,_and_tRNA-dihydrouridine_synthase


id: CL:2324
description: Mixed, incl. Terpenoid backbone biosynthesis, and Phospholipid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2324_Mixed,_incl._Terpenoid_backbone_biosynthesis,_and_Phospholipid_metabolism


id: CL:2325
description: Mixed, incl. Phospholipid metabolism, and Regulation of DNA replication
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2325_Mixed,_incl._Phospholipid_metabolism,_and_Regulation_of_DNA_replication


id: CL:2326
description: Mixed, incl. CDP-alcohol phosphatidyltransferase, and Zymogen
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2326_Mixed,_incl._CDP-alcohol_phosphatidyltransferase,_and_Zymogen


id: CL:2339
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2339_Mixed,_incl._CDP-diacylglycerol_metabolic_process,_and_Peptidase_M50,_putative_membrane-associated_zinc_metallopeptidase

description:
  Mixed, incl. CDP-diacylglycerol metabolic process, and Peptidase M50, putative membrane-associated zinc metallopeptidase


id: CL:2348
description: Isoprenoid biosynthetic process, and Exodeoxyribonuclease VII complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2348_Isoprenoid_biosynthetic_process,_and_Exodeoxyribonuclease_VII_complex


id: CL:2350
description: Isoprenoid biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2350_Isoprenoid_biosynthetic_process


id: CL:2370
description: Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and Cellular carbohydrate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2370_Mixed,_incl._O-Antigen_nucleotide_sugar_biosynthesis,_and_Cellular_carbohydrate_metabolic_process


id: CL:2371
description: Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and Inositol phosphate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2371_Mixed,_incl._O-Antigen_nucleotide_sugar_biosynthesis,_and_Inositol_phosphate_metabolism


id: CL:2372
description: Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and Inositol phosphate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2372_Mixed,_incl._O-Antigen_nucleotide_sugar_biosynthesis,_and_Inositol_phosphate_metabolism


id: CL:2374
description: O-Antigen nucleotide sugar biosynthesis, and Oxidoreductase family, NAD-binding Rossmann fold
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2374_O-Antigen_nucleotide_sugar_biosynthesis,_and_Oxidoreductase_family,_NAD-binding_Rossmann_fold


id: CL:2377
description: Gfo/Idh/MocA-like oxidoreductase, N-terminal, and DegT/DnrJ/EryC1/StrS aminotransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2377_Gfo/Idh/MocA-like_oxidoreductase,_N-terminal,_and_DegT/DnrJ/EryC1/StrS_aminotransferase


id: CL:2395
description: Mixed, incl. Lipopolysaccharide core region metabolic process, and Cupin domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2395_Mixed,_incl._Lipopolysaccharide_core_region_metabolic_process,_and_Cupin_domain


id: CL:2426
description: Mixed, incl. Glycosyl transferase 4-like, and Glycosyl transferase family 4
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2426_Mixed,_incl._Glycosyl_transferase_4-like,_and_Glycosyl_transferase_family_4


id: CL:2438
description: EamA domain, and Glycosyltransferase Family 4
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2438_EamA_domain,_and_Glycosyltransferase_Family_4


id: CL:2452
description: Mixed, incl. Tetrapyrrole metabolic process, and Quinone metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2452_Mixed,_incl._Tetrapyrrole_metabolic_process,_and_Quinone_metabolic_process


id: CL:2453
description: Mixed, incl. Porphyrin-containing compound metabolic process, and Quinone metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2453_Mixed,_incl._Porphyrin-containing_compound_metabolic_process,_and_Quinone_metabolic_process


id: CL:2454
description: Mixed, incl. Heme biosynthetic process, and Elongator protein 3, MiaB family, Radical SAM
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2454_Mixed,_incl._Heme_biosynthetic_process,_and_Elongator_protein_3,_MiaB_family,_Radical_SAM


id: CL:2456
description: Porphyrin biosynthesis, and Elongator protein 3, MiaB family, Radical SAM
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2456_Porphyrin_biosynthesis,_and_Elongator_protein_3,_MiaB_family,_Radical_SAM


id: CL:2476
description: Elongator protein 3, MiaB family, Radical SAM, and PUA-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2476_Elongator_protein_3,_MiaB_family,_Radical_SAM,_and_PUA-like_superfamily


id: CL:2497
description: Mixed, incl. Quinone metabolic process, and TAT protein transport complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2497_Mixed,_incl._Quinone_metabolic_process,_and_TAT_protein_transport_complex


id: CL:2498
description: Quinone metabolic process, and TAT protein transport complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2498_Quinone_metabolic_process,_and_TAT_protein_transport_complex


id: CL:2499
description: TAT protein transport complex, and Ubiquinone biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2499_TAT_protein_transport_complex,_and_Ubiquinone_biosynthesis


id: CL:250
description: Mixed, incl. Large ribosomal subunit rRNA binding, and Ribosomal large subunit assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:250_Mixed,_incl._Large_ribosomal_subunit_rRNA_binding,_and_Ribosomal_large_subunit_assembly


id: CL:2512
description: Mixed, incl. Ubiquinone biosynthesis hydroxylase UbiH/COQ6, and Ubiquinone biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2512_Mixed,_incl._Ubiquinone_biosynthesis_hydroxylase_UbiH/COQ6,_and_Ubiquinone_biosynthesis


id: CL:2525
description: Mixed, incl. Flavoprotein, and FtsJ-like methyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2525_Mixed,_incl._Flavoprotein,_and_FtsJ-like_methyltransferase


id: CL:2536
description: Mixed, incl. Biotin metabolic process, and Nitroreductase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2536_Mixed,_incl._Biotin_metabolic_process,_and_Nitroreductase


id: CL:2539
description: Mixed, incl. Biotin metabolic process, and Threonine catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2539_Mixed,_incl._Biotin_metabolic_process,_and_Threonine_catabolic_process


id: CL:2540
description: Biotin metabolic process, and Zinc finger, FPG/IleRS-type
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2540_Biotin_metabolic_process,_and_Zinc_finger,_FPG/IleRS-type


id: CL:2561
description: Mixed, incl. Threonine catabolic process, and PP-loop family
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2561_Mixed,_incl._Threonine_catabolic_process,_and_PP-loop_family


id: CL:2578
description: Mostly uncharacterized, incl. Nitroreductase, and DHHA1 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2578_Mostly_uncharacterized,_incl._Nitroreductase,_and_DHHA1_domain


id: CL:2579
description: Mixed, incl. Nitroreductase, and DHHA1 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2579_Mixed,_incl._Nitroreductase,_and_DHHA1_domain


id: CL:2580
description: Mixed, incl. DHHA1 domain, and NUDIX domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2580_Mixed,_incl._DHHA1_domain,_and_NUDIX_domain


id: CL:259
description: Mixed, incl. Zinc-binding ribosomal protein, and L28p-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:259_Mixed,_incl._Zinc-binding_ribosomal_protein,_and_L28p-like


id: CL:2591
description: Nitroreductase, and Ligase activity, forming carbon-sulfur bonds
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2591_Nitroreductase,_and_Ligase_activity,_forming_carbon-sulfur_bonds


id: CL:2600
description: Mixed, incl. Methyltransferase type 11, and 2-Oxocarboxylic acid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2600_Mixed,_incl._Methyltransferase_type_11,_and_2-Oxocarboxylic_acid_metabolism


id: CL:2610
description: Mixed, incl. HIT domain, and Cellular response to pH
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2610_Mixed,_incl._HIT_domain,_and_Cellular_response_to_pH


id: CL:2624
description: Mixed, incl. Alditol phosphate metabolic process, and Carbohydrate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2624_Mixed,_incl._Alditol_phosphate_metabolic_process,_and_Carbohydrate_transport


id: CL:2625
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2625_Mixed,_incl._Alditol_phosphate_metabolic_process,_and_Glycerophosphodiester_phosphodiesterase_domain

description:
  Mixed, incl. Alditol phosphate metabolic process, and Glycerophosphodiester phosphodiesterase domain


id: CL:2627
description: Mixed, incl. MetI-like superfamily, and Thioesterase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2627_Mixed,_incl._MetI-like_superfamily,_and_Thioesterase_domain


id: CL:2645
description: Mixed, incl. Alditol phosphate metabolic process, and Phosphatidic acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2645_Mixed,_incl._Alditol_phosphate_metabolic_process,_and_Phosphatidic_acid_metabolic_process


id: CL:2658
description: Import into cell, and Lipoprotein metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2658_Import_into_cell,_and_Lipoprotein_metabolic_process


id: CL:2667
description: Mixed, incl. One-carbon metabolic process, and Methionine transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2667_Mixed,_incl._One-carbon_metabolic_process,_and_Methionine_transport


id: CL:2668
description: Mixed, incl. Adenosylhomocysteinase activity, and DNA binding HTH domain, AraC-type
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2668_Mixed,_incl._Adenosylhomocysteinase_activity,_and_DNA_binding_HTH_domain,_AraC-type


id: CL:2679
description: Methionine transport, and Amino acid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2679_Methionine_transport,_and_Amino_acid_transport


id: CL:2688
description: Mixed, incl. Peptidase S33, and Sulfuric ester hydrolase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2688_Mixed,_incl._Peptidase_S33,_and_Sulfuric_ester_hydrolase_activity


id: CL:2691
description: Mixed, incl. Sulfuric ester hydrolase activity, and Bacterial nucleoid
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2691_Mixed,_incl._Sulfuric_ester_hydrolase_activity,_and_Bacterial_nucleoid


id: CL:2693
description: Mixed, incl. Sulfuric ester hydrolase activity, and Nitrous oxide reductase, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2693_Mixed,_incl._Sulfuric_ester_hydrolase_activity,_and_Nitrous_oxide_reductase,_N-terminal


id: CL:2719
description: Mixed, incl. Peptidase S33, and SET domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2719_Mixed,_incl._Peptidase_S33,_and_SET_domain


id: CL:2737
description: Mixed, incl. 2 iron, 2 sulfur cluster binding, and Monooxygenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2737_Mixed,_incl._2_iron,_2_sulfur_cluster_binding,_and_Monooxygenase_activity


id: CL:2738
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2738_Mixed,_incl._Monooxygenase_activity,_and_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen

description:
  Mixed, incl. Monooxygenase activity, and Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen


id: CL:2739
description: Mixed, incl. Monooxygenase activity, and Oxidoreductase FAD-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2739_Mixed,_incl._Monooxygenase_activity,_and_Oxidoreductase_FAD-binding_domain


id: CL:2741
description: Mixed, incl. Monooxygenase activity, and Oxidoreductase FAD-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2741_Mixed,_incl._Monooxygenase_activity,_and_Oxidoreductase_FAD-binding_domain


id: CL:2742
description: Mixed, incl. Oxidoreductase FAD-binding domain, and Monooxygenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2742_Mixed,_incl._Oxidoreductase_FAD-binding_domain,_and_Monooxygenase_activity


id: CL:2744
description: Oxygen transport, and Oxidoreductase FAD-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2744_Oxygen_transport,_and_Oxidoreductase_FAD-binding_domain


id: CL:2760
description: Monooxygenase activity, and Steroid biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2760_Monooxygenase_activity,_and_Steroid_biosynthesis


id: CL:277
description: Mixed, incl. L28p-like, and Translation protein SH3-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:277_Mixed,_incl._L28p-like,_and_Translation_protein_SH3-like_domain_superfamily


id: CL:2772
description: Mixed, incl. Sterol metabolic process, and Haem oxygenase-like, multi-helical
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2772_Mixed,_incl._Sterol_metabolic_process,_and_Haem_oxygenase-like,_multi-helical


id: CL:2793
description: Mixed, incl. Aminobenzoate degradation, and FAD-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2793_Mixed,_incl._Aminobenzoate_degradation,_and_FAD-binding_domain


id: CL:2795
description: Mixed, incl. TauD/TfdA-like domain, and 3-phenylpropionate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2795_Mixed,_incl._TauD/TfdA-like_domain,_and_3-phenylpropionate_metabolic_process


id: CL:2811
description: Mixed, incl. Amidohydrolase, and Toluene degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2811_Mixed,_incl._Amidohydrolase,_and_Toluene_degradation


id: CL:2826
description: Mixed, incl. Styrene degradation, and Vicinal oxygen chelate (VOC) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2826_Mixed,_incl._Styrene_degradation,_and_Vicinal_oxygen_chelate_(VOC)_domain


id: CL:2828
description: Styrene degradation, and L-phenylalanine catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2828_Styrene_degradation,_and_L-phenylalanine_catabolic_process


id: CL:2849
description: Mixed, incl. Iron-sulfur cluster assembly, and Sulfur relay system
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2849_Mixed,_incl._Iron-sulfur_cluster_assembly,_and_Sulfur_relay_system


id: CL:2852
description: Iron-sulfur cluster assembly, and Chaperone binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2852_Iron-sulfur_cluster_assembly,_and_Chaperone_binding


id: CL:2854
description: Iron-sulfur cluster assembly complex, and Cysteine desulfurase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2854_Iron-sulfur_cluster_assembly_complex,_and_Cysteine_desulfurase


id: CL:2881
description: Mixed, incl. Rhodanese-like domain, and Smr domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2881_Mixed,_incl._Rhodanese-like_domain,_and_Smr_domain


id: CL:2882
description: Mixed, incl. Aldehyde catabolic process, and Thiosulfate sulfurtransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2882_Mixed,_incl._Aldehyde_catabolic_process,_and_Thiosulfate_sulfurtransferase_activity


id: CL:2891
description: Mixed, incl. Smr domain, and Glutaredoxin subgroup
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2891_Mixed,_incl._Smr_domain,_and_Glutaredoxin_subgroup


id: CL:2900
description: Mixed, incl. Glutathione metabolism, and Glutamine family amino acid catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2900_Mixed,_incl._Glutathione_metabolism,_and_Glutamine_family_amino_acid_catabolic_process


id: CL:2902
description: Mixed, incl. Glutathione metabolism, and Glutamine family amino acid catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2902_Mixed,_incl._Glutathione_metabolism,_and_Glutamine_family_amino_acid_catabolic_process


id: CL:2903
description: Mixed, incl. Glutathione metabolism, and Peptidoglycan transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2903_Mixed,_incl._Glutathione_metabolism,_and_Peptidoglycan_transport


id: CL:2905
description: Mixed, incl. Glutathione synthase activity, and Glutamate-cysteine ligase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2905_Mixed,_incl._Glutathione_synthase_activity,_and_Glutamate-cysteine_ligase_activity


id: CL:2920
description: Peptidase family M1 domain, and Macro domain-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2920_Peptidase_family_M1_domain,_and_Macro_domain-like


id: CL:293
description: Small ribosomal subunit, and Initiation factor
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:293_Small_ribosomal_subunit,_and_Initiation_factor


id: CL:2934
description: Mixed, incl. Glutamine family amino acid catabolic process, and Di-haem cytochrome, transmembrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2934_Mixed,_incl._Glutamine_family_amino_acid_catabolic_process,_and_Di-haem_cytochrome,_transmembrane


id: CL:2936
description: Arginine metabolism, and ArgE/DapE/ACY1/CPG2/YscS, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2936_Arginine_metabolism,_and_ArgE/DapE/ACY1/CPG2/YscS,_conserved_site


id: CL:2948
description: Mixed, incl. Fumarate metabolic process, and Di-haem cytochrome, transmembrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2948_Mixed,_incl._Fumarate_metabolic_process,_and_Di-haem_cytochrome,_transmembrane


id: CL:2962
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2962_Mixed,_incl._Phenylacetate_catabolic_process,_and_Legionella_pneumophila_major_outer_membrane_protein_precursor

description:
  Mixed, incl. Phenylacetate catabolic process, and Legionella pneumophila major outer membrane protein precursor


id: CL:2964
description: Mixed, incl. Apolipoprotein N-acyltransferase, and Saccharopine dehydrogenase-like, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2964_Mixed,_incl._Apolipoprotein_N-acyltransferase,_and_Saccharopine_dehydrogenase-like,_C-terminal


id: CL:2984
description: Mixed, incl. Signal, and DNA binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2984_Mixed,_incl._Signal,_and_DNA_binding


id: CL:2986
description: Mixed, incl. Signal, and S-adenosyl-L-methionine-dependent methyltransferase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2986_Mixed,_incl._Signal,_and_S-adenosyl-L-methionine-dependent_methyltransferase_superfamily


id: CL:2987
description: Mixed, incl. Signal, and S-adenosyl-L-methionine-dependent methyltransferase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2987_Mixed,_incl._Signal,_and_S-adenosyl-L-methionine-dependent_methyltransferase_superfamily


id: CL:2988
description: Mixed, incl. Signal, and S-adenosyl-L-methionine-dependent methyltransferase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2988_Mixed,_incl._Signal,_and_S-adenosyl-L-methionine-dependent_methyltransferase_superfamily


id: CL:2989
description: Mixed, incl. Signal, and S-adenosyl-L-methionine-dependent methyltransferase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2989_Mixed,_incl._Signal,_and_S-adenosyl-L-methionine-dependent_methyltransferase_superfamily


id: CL:2991
description: Mixed, incl. Signal, and S-adenosyl-L-methionine-dependent methyltransferase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2991_Mixed,_incl._Signal,_and_S-adenosyl-L-methionine-dependent_methyltransferase_superfamily


id: CL:2993
description: Mixed, incl. Signal, and Protein secretion
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2993_Mixed,_incl._Signal,_and_Protein_secretion


id: CL:2996
description: Mixed, incl. Cell wall organization or biogenesis, and Protein secretion
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2996_Mixed,_incl._Cell_wall_organization_or_biogenesis,_and_Protein_secretion


id: CL:2998
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:2998_Mostly_uncharacterized,_incl._Adaptive_Immune_System,_and_Hydrolase_activity,_acting_on_glycosyl_bonds

description:
  Mostly uncharacterized, incl. Adaptive Immune System, and Hydrolase activity, acting on glycosyl bonds


id: CL:3000
description: Mostly uncharacterized, incl. Capsule organization, and RlpA-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3000_Mostly_uncharacterized,_incl._Capsule_organization,_and_RlpA-like_domain_superfamily


id: CL:3002
description: Mostly uncharacterized, incl. Capsule organization, and RlpA-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3002_Mostly_uncharacterized,_incl._Capsule_organization,_and_RlpA-like_domain_superfamily


id: CL:3003
description: Mixed, incl. RlpA-like domain superfamily, and Identical protein binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3003_Mixed,_incl._RlpA-like_domain_superfamily,_and_Identical_protein_binding


id: CL:3007
description: Mostly uncharacterized, incl. PilZ domain, and Cell septum
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3007_Mostly_uncharacterized,_incl._PilZ_domain,_and_Cell_septum


id: CL:3011
description: Mixed, incl. Cell septum, and Cell-cell signaling
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3011_Mixed,_incl._Cell_septum,_and_Cell-cell_signaling


id: CL:3036
description: Capsule organization, and FAD-linked oxidase-like, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3036_Capsule_organization,_and_FAD-linked_oxidase-like,_C-terminal


id: CL:3054
description: Mixed, incl. Peptidase C1-like family, and Nucleoside phosphatase GDA1/CD39
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3054_Mixed,_incl._Peptidase_C1-like_family,_and_Nucleoside_phosphatase_GDA1/CD39


id: CL:3057
description: Mixed, incl. Peptidase C1-like family, and LexA-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3057_Mixed,_incl._Peptidase_C1-like_family,_and_LexA-like


id: CL:3058
description: Mixed, incl. Peptidase C1-like family, and Zinc ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3058_Mixed,_incl._Peptidase_C1-like_family,_and_Zinc_ion_transport


id: CL:3072
description: Mixed, incl. LexA-like, and Uracil-DNA glycosylase family 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3072_Mixed,_incl._LexA-like,_and_Uracil-DNA_glycosylase_family_1


id: CL:3096
description: Mixed, incl. L,D-transpeptidase catalytic domain, and OmpA family
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3096_Mixed,_incl._L,D-transpeptidase_catalytic_domain,_and_OmpA_family


id: CL:3097
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3097_Mixed,_incl._L,D-transpeptidase_catalytic_domain,_and_Type-IV_b_secretion_system,_inner-membrane_complex_component

description:
  Mixed, incl. L,D-transpeptidase catalytic domain, and Type-IV b secretion system, inner-membrane complex component


id: CL:3098
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3098_Mixed,_incl._L,D-transpeptidase_catalytic_domain,_and_Type-IV_b_secretion_system,_inner-membrane_complex_component

description:
  Mixed, incl. L,D-transpeptidase catalytic domain, and Type-IV b secretion system, inner-membrane complex component


id: CL:3099
description: Mixed, incl. L,D-transpeptidase catalytic domain, and Toxin metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3099_Mixed,_incl._L,D-transpeptidase_catalytic_domain,_and_Toxin_metabolic_process


id: CL:3110
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3110_Type-IV_b_secretion_system,_inner-membrane_complex_component,_and_Peptidoglycan-protein_cross-linking

description:
  Type-IV b secretion system, inner-membrane complex component, and Peptidoglycan-protein cross-linking


id: CL:3121
description: Mixed, incl. HNH nuclease, and Type IV secretion-system coupling protein DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3121_Mixed,_incl._HNH_nuclease,_and_Type_IV_secretion-system_coupling_protein_DNA-binding_domain


id: CL:3130
description: Mixed, incl. OmpA family, and Transglycosylase SLT domain 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3130_Mixed,_incl._OmpA_family,_and_Transglycosylase_SLT_domain_1


id: CL:3134
description: Mixed, incl. Pentapeptide repeats (9 copies), and OmpA family
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3134_Mixed,_incl._Pentapeptide_repeats_(9_copies),_and_OmpA_family


id: CL:3185
description: Mixed, incl. Aromatic amino acid transport, and Anion:anion antiporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3185_Mixed,_incl._Aromatic_amino_acid_transport,_and_Anion:anion_antiporter_activity


id: CL:3200
description: Mostly uncharacterized, incl. RES domain, and AsmA-like, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3200_Mostly_uncharacterized,_incl._RES_domain,_and_AsmA-like,_C-terminal


id: CL:3204
description: Mixed, incl. AsmA-like, C-terminal, and Fusaric acid resistance protein-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3204_Mixed,_incl._AsmA-like,_C-terminal,_and_Fusaric_acid_resistance_protein-like


id: CL:3229
description: Mixed, incl. Host cell, and Surface antigen
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3229_Mixed,_incl._Host_cell,_and_Surface_antigen


id: CL:3240
description: Mixed, incl. Smr domain, and 23S rRNA-intervening sequence superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3240_Mixed,_incl._Smr_domain,_and_23S_rRNA-intervening_sequence_superfamily


id: CL:3257
description: Mixed, incl. Membrane organization, and Lipopolysaccharide biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3257_Mixed,_incl._Membrane_organization,_and_Lipopolysaccharide_biosynthesis


id: CL:3258
description: Mixed, incl. Membrane organization, and Lipid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3258_Mixed,_incl._Membrane_organization,_and_Lipid_transport


id: CL:3259
description: Mixed, incl. Membrane assembly, and Bacteriocin transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3259_Mixed,_incl._Membrane_assembly,_and_Bacteriocin_transport


id: CL:3260
description: Mixed, incl. Membrane assembly, and Side of membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3260_Mixed,_incl._Membrane_assembly,_and_Side_of_membrane


id: CL:3265
description: Gram-negative-bacterium-type cell outer membrane assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3265_Gram-negative-bacterium-type_cell_outer_membrane_assembly


id: CL:3285
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3285_Mixed,_incl._Lipoprotein_localisation_LolA/LolB/LppX,_and_uroporphyrin-III_C-methyltransferase_activity

description:
  Mixed, incl. Lipoprotein localisation LolA/LolB/LppX, and uroporphyrin-III C-methyltransferase activity


id: CL:3297
description: Mixed, incl. Bacteriocin transport, and Periplasm
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3297_Mixed,_incl._Bacteriocin_transport,_and_Periplasm


id: CL:3300
description: Mixed, incl. Periplasm, and Outer membrane protein, bacterial
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3300_Mixed,_incl._Periplasm,_and_Outer_membrane_protein,_bacterial


id: CL:3318
description: Lipid transport, and BolA protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3318_Lipid_transport,_and_BolA_protein


id: CL:3319
description: Phospholipid transport, and BolA protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3319_Phospholipid_transport,_and_BolA_protein


id: CL:3351
description: Lipooligosaccharide metabolic process, and Lipopolysaccharide biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3351_Lipooligosaccharide_metabolic_process,_and_Lipopolysaccharide_biosynthesis


id: CL:3352
description: Lipid A biosynthesis, and Lipopolysaccharide biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3352_Lipid_A_biosynthesis,_and_Lipopolysaccharide_biosynthesis


id: CL:3372
description: Lipopolysaccharide biosynthesis, and SIS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3372_Lipopolysaccharide_biosynthesis,_and_SIS_domain


id: CL:3384
description: Mixed, incl. ABC-2 type transporter, and Gram-negative-bacterium-type cell wall
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3384_Mixed,_incl._ABC-2_type_transporter,_and_Gram-negative-bacterium-type_cell_wall


id: CL:3396
description: Mixed, incl. Protein glycosylation, and Outer membrane protein beta-barrel domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3396_Mixed,_incl._Protein_glycosylation,_and_Outer_membrane_protein_beta-barrel_domain


id: CL:3397
description: Mixed, incl. Outer membrane protein beta-barrel domain, and DsbB-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3397_Mixed,_incl._Outer_membrane_protein_beta-barrel_domain,_and_DsbB-like_superfamily


id: CL:3399
description: Outer membrane protein beta-barrel domain, and Saccharopine dehydrogenase-like, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3399_Outer_membrane_protein_beta-barrel_domain,_and_Saccharopine_dehydrogenase-like,_C-terminal


id: CL:3417
description: Protein glycosylation, and Glycosyltransferase 2-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3417_Protein_glycosylation,_and_Glycosyltransferase_2-like


id: CL:3429
description: Mixed, incl. Bacterial secretion system, and Quorum sensing
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3429_Mixed,_incl._Bacterial_secretion_system,_and_Quorum_sensing


id: CL:343
description: Ribosomal small subunit biogenesis, and PUA domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:343_Ribosomal_small_subunit_biogenesis,_and_PUA_domain_superfamily


id: CL:3430
description: Mixed, incl. Bacterial secretion system, and Type IV pilus-dependent motility
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3430_Mixed,_incl._Bacterial_secretion_system,_and_Type_IV_pilus-dependent_motility


id: CL:3432
description: Mixed, incl. Secretion by the type IV secretion system, and Quorum sensing
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3432_Mixed,_incl._Secretion_by_the_type_IV_secretion_system,_and_Quorum_sensing


id: CL:3433
description: Mixed, incl. Secretion by the type IV secretion system, and Quorum sensing
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3433_Mixed,_incl._Secretion_by_the_type_IV_secretion_system,_and_Quorum_sensing


id: CL:3434
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3434_Mostly_uncharacterized,_incl._Secretion_by_the_type_IV_secretion_system,_and_Nucleotidyl_transferase_AbiEii_toxin,_Type_IV_TA_system

description:
  Mostly uncharacterized, incl. Secretion by the type IV secretion system, and Nucleotidyl transferase AbiEii toxin, Type IV TA system


id: CL:3436
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3436_Mostly_uncharacterized,_incl._Secretion_by_the_type_IV_secretion_system,_and_Nucleotidyl_transferase_AbiEii_toxin,_Type_IV_TA_system

description:
  Mostly uncharacterized, incl. Secretion by the type IV secretion system, and Nucleotidyl transferase AbiEii toxin, Type IV TA system


id: CL:3437
description: Mixed, incl. Secretion by the type IV secretion system, and Peptidase S26
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3437_Mixed,_incl._Secretion_by_the_type_IV_secretion_system,_and_Peptidase_S26


id: CL:3440
description: Mixed, incl. Secretion by the type IV secretion system, and Peptidase S26
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3440_Mixed,_incl._Secretion_by_the_type_IV_secretion_system,_and_Peptidase_S26


id: CL:3443
description: Mixed, incl. Response to virus, and Type IV secretion system, VirB10/TrbI
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3443_Mixed,_incl._Response_to_virus,_and_Type_IV_secretion_system,_VirB10/TrbI


id: CL:3472
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3472_Mixed,_incl._Nucleotidyl_transferase_AbiEii_toxin,_Type_IV_TA_system,_and_Exodeoxyribonuclease_V_complex

description:
  Mixed, incl. Nucleotidyl transferase AbiEii toxin, Type IV TA system, and Exodeoxyribonuclease V complex


id: CL:3474
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3474_Nucleotidyl_transferase_AbiEii_toxin,_Type_IV_TA_system,_and_Intracellular_non-membrane-bounded_organelle

description:
  Nucleotidyl transferase AbiEii toxin, Type IV TA system, and Intracellular non-membrane-bounded organelle


id: CL:3505
description: Mixed, incl. Pentapeptide repeats (9 copies), and Protein of unknown function (DUF692)
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3505_Mixed,_incl._Pentapeptide_repeats_(9_copies),_and_Protein_of_unknown_function_(DUF692)


id: CL:3514
description: Mixed, incl. Domain of unknown function DUF1971, and Protein of unknown function DUF488
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3514_Mixed,_incl._Domain_of_unknown_function_DUF1971,_and_Protein_of_unknown_function_DUF488


id: CL:3531
description: Bacterial secretion system, and Type IV pilus-dependent motility
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3531_Bacterial_secretion_system,_and_Type_IV_pilus-dependent_motility


id: CL:3533
description: Mixed, incl. Pilus organization, and Type II/IV secretion system protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3533_Mixed,_incl._Pilus_organization,_and_Type_II/IV_secretion_system_protein


id: CL:3568
description: Pilus retraction protein PilT/PilU, and GspF/PilC family
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3568_Pilus_retraction_protein_PilT/PilU,_and_GspF/PilC_family


id: CL:3582
description: Mixed, incl. Type II protein secretion system complex, and Type II/III secretion system
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3582_Mixed,_incl._Type_II_protein_secretion_system_complex,_and_Type_II/III_secretion_system


id: CL:3584
description: Type II protein secretion system complex, and NolW-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3584_Type_II_protein_secretion_system_complex,_and_NolW-like


id: CL:3617
description: Mostly uncharacterized, incl. beta-Lactam resistance, and Leucine-rich repeat domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3617_Mostly_uncharacterized,_incl._beta-Lactam_resistance,_and_Leucine-rich_repeat_domain_superfamily


id: CL:3618
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3618_Mostly_uncharacterized,_incl._Leucine-rich_repeat_domain_superfamily,_and_Ubiquinone_and_other_terpenoid-quinone_biosynthesis

description:
  Mostly uncharacterized, incl. Leucine-rich repeat domain superfamily, and Ubiquinone and other terpenoid-quinone biosynthesis


id: CL:3619
description: Mostly uncharacterized, incl. Leucine-rich repeat domain superfamily, and Endonuclease
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3619_Mostly_uncharacterized,_incl._Leucine-rich_repeat_domain_superfamily,_and_Endonuclease


id: CL:3620
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3620_Mostly_uncharacterized,_incl._Leucine-rich_repeat_domain_superfamily,_and_Suppression_of_phagosomal_maturation

description:
  Mostly uncharacterized, incl. Leucine-rich repeat domain superfamily, and Suppression of phagosomal maturation


id: CL:3621
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3621_Mostly_uncharacterized,_incl._Leucine-rich_repeat_domain_superfamily,_and_Suppression_of_phagosomal_maturation

description:
  Mostly uncharacterized, incl. Leucine-rich repeat domain superfamily, and Suppression of phagosomal maturation


id: CL:3623
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3623_Mostly_uncharacterized,_incl._Leucine-rich_repeat_domain_superfamily,_and_Protein_phosphatase_2C_family

description:
  Mostly uncharacterized, incl. Leucine-rich repeat domain superfamily, and Protein phosphatase 2C family


id: CL:3624
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3624_Mostly_uncharacterized,_incl._Leucine-rich_repeat_domain_superfamily,_and_Protein_phosphatase_2C_family

description:
  Mostly uncharacterized, incl. Leucine-rich repeat domain superfamily, and Protein phosphatase 2C family


id: CL:3625
description: Mostly uncharacterized, incl. Carboxypeptidase, and Phenylalanine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3625_Mostly_uncharacterized,_incl._Carboxypeptidase,_and_Phenylalanine_metabolism


id: CL:3627
description: Mostly uncharacterized, incl. Phenylalanine metabolism, and Pore complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3627_Mostly_uncharacterized,_incl._Phenylalanine_metabolism,_and_Pore_complex


id: CL:3632
description: Mixed, incl. Inositol hexakisphosphate, and Protein phosphatase 2C family
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3632_Mixed,_incl._Inositol_hexakisphosphate,_and_Protein_phosphatase_2C_family


id: CL:3636
description: Mixed, incl. Protein phosphatase 2C family, and CDP-diacylglycerol metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3636_Mixed,_incl._Protein_phosphatase_2C_family,_and_CDP-diacylglycerol_metabolic_process


id: CL:3668
description: Mixed, incl. Leucine-rich repeat domain superfamily, and Protein phosphatase 2C family
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3668_Mixed,_incl._Leucine-rich_repeat_domain_superfamily,_and_Protein_phosphatase_2C_family


id: CL:3670
description: Leucine-rich repeat, and Protein phosphatase 2C family
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3670_Leucine-rich_repeat,_and_Protein_phosphatase_2C_family


id: CL:3687
description: Mixed, incl. PQ-loop repeat, and NodB homology domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3687_Mixed,_incl._PQ-loop_repeat,_and_NodB_homology_domain


id: CL:3703
description: Mixed, incl. Aminomethyltransferase folate-binding domain, and Succinate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3703_Mixed,_incl._Aminomethyltransferase_folate-binding_domain,_and_Succinate_metabolic_process


id: CL:3712
description: Mixed, incl. Response to UV, and Bacterial nucleoid
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3712_Mixed,_incl._Response_to_UV,_and_Bacterial_nucleoid


id: CL:3723
description: rRNA 2-O-methylation, and GIY-YIG endonuclease
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3723_rRNA_2-O-methylation,_and_GIY-YIG_endonuclease


id: CL:3735
description: Mixed, incl. Pyruvate biosynthetic process, and UbiA prenyltransferase conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3735_Mixed,_incl._Pyruvate_biosynthetic_process,_and_UbiA_prenyltransferase_conserved_site


id: CL:3752
description: Mixed, incl. Beta-lactamase/transpeptidase-like, and Hexosaminidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3752_Mixed,_incl._Beta-lactamase/transpeptidase-like,_and_Hexosaminidase_activity


id: CL:3754
description: Beta-lactamase/transpeptidase-like, and Hexosaminidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3754_Beta-lactamase/transpeptidase-like,_and_Hexosaminidase_activity


id: CL:3780
description: Mostly uncharacterized, incl. Phosphate transporter, and Regulation of cell cycle
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3780_Mostly_uncharacterized,_incl._Phosphate_transporter,_and_Regulation_of_cell_cycle


id: CL:3781
description: Mixed, incl. Regulation of cell cycle, and glycyl-tRNA aminoacylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3781_Mixed,_incl._Regulation_of_cell_cycle,_and_glycyl-tRNA_aminoacylation


id: CL:3782
description: Mixed, incl. Regulation of cell cycle, and TAM protein secretion complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3782_Mixed,_incl._Regulation_of_cell_cycle,_and_TAM_protein_secretion_complex


id: CL:3783
description: TAM protein secretion complex, and Lipid-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3783_TAM_protein_secretion_complex,_and_Lipid-binding


id: CL:3792
description: Regulation of cell cycle, and AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3792_Regulation_of_cell_cycle,_and_AAA_domain


id: CL:3802
description: glycyl-tRNA aminoacylation, and Proline iminopeptidase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3802_glycyl-tRNA_aminoacylation,_and_Proline_iminopeptidase


id: CL:3820
description: Phosphate transporter, and RNA capping
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3820_Phosphate_transporter,_and_RNA_capping


id: CL:3833
description: Mixed, incl. NADP metabolic process, and Carbon-nitrogen hydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3833_Mixed,_incl._NADP_metabolic_process,_and_Carbon-nitrogen_hydrolase


id: CL:3834
description: Mixed, incl. Carbon-nitrogen hydrolase, and PmbA/TldA metallopeptidase domain 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3834_Mixed,_incl._Carbon-nitrogen_hydrolase,_and_PmbA/TldA_metallopeptidase_domain_1


id: CL:3835
description: Mixed, incl. PmbA/TldA metallopeptidase domain 1, and Polyamine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3835_Mixed,_incl._PmbA/TldA_metallopeptidase_domain_1,_and_Polyamine_metabolic_process


id: CL:3837
description: PmbA/TldA metallopeptidase domain 1, and Domain of unknown function DUF559
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3837_PmbA/TldA_metallopeptidase_domain_1,_and_Domain_of_unknown_function_DUF559


id: CL:3856
description: Mixed, incl. NAD(+) synthetase, and Methyltransferase domain 25
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3856_Mixed,_incl._NAD(+)_synthetase,_and_Methyltransferase_domain_25


id: CL:3868
description: Mixed, incl. NAD(P)+ transhydrogenase activity, and Alanine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3868_Mixed,_incl._NAD(P)+_transhydrogenase_activity,_and_Alanine_metabolic_process


id: CL:3870
description: NAD(P)+ transhydrogenase activity, and Alanine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3870_NAD(P)+_transhydrogenase_activity,_and_Alanine_metabolic_process


id: CL:3882
description: Mixed, incl. NAD metabolic process, and Double-strand break repair via homologous recombination
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3882_Mixed,_incl._NAD_metabolic_process,_and_Double-strand_break_repair_via_homologous_recombination


id: CL:3898
description: Mixed, incl. Antiporter activity, and Histone-like DNA-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3898_Mixed,_incl._Antiporter_activity,_and_Histone-like_DNA-binding_protein


id: CL:3900
description: Mixed, incl. Antiport, and Histone-like DNA-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3900_Mixed,_incl._Antiport,_and_Histone-like_DNA-binding_protein


id: CL:3902
description: Mixed, incl. TrkA-N domain, and Histone-like DNA-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3902_Mixed,_incl._TrkA-N_domain,_and_Histone-like_DNA-binding_protein


id: CL:3903
description: Mixed, incl. TrkA-N domain, and SEC-C motif
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3903_Mixed,_incl._TrkA-N_domain,_and_SEC-C_motif


id: CL:3916
description: Histone-like DNA-binding protein, and Response to virus
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3916_Histone-like_DNA-binding_protein,_and_Response_to_virus


id: CL:3934
description: Mostly uncharacterized, incl. Nitrogen fixation, and PEP-utilising enzyme, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3934_Mostly_uncharacterized,_incl._Nitrogen_fixation,_and_PEP-utilising_enzyme,_C-terminal


id: CL:3936
description: Mixed, incl. PEP-utilising enzyme, C-terminal, and Serine/threonine-protein kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3936_Mixed,_incl._PEP-utilising_enzyme,_C-terminal,_and_Serine/threonine-protein_kinase


id: CL:3957
description: Mixed, incl. Transmembrane transport, and Calcium ion binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3957_Mixed,_incl._Transmembrane_transport,_and_Calcium_ion_binding


id: CL:3958
description: Mixed, incl. beta-Lactam resistance, and Transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3958_Mixed,_incl._beta-Lactam_resistance,_and_Transport


id: CL:3959
description: Mixed, incl. beta-Lactam resistance, and Calcium ion binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3959_Mixed,_incl._beta-Lactam_resistance,_and_Calcium_ion_binding


id: CL:3962
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3962_Mixed,_incl._RND_efflux_pump,_membrane_fusion_protein,_barrel-sandwich_domain,_and_Multidrug_efflux_transporter_AcrB_TolC_docking_domain,_DN/DC_subdomains

description:
  Mixed, incl. RND efflux pump, membrane fusion protein, barrel-sandwich domain, and Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains


id: CL:3963
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3963_Mixed,_incl._RND_efflux_pump,_membrane_fusion_protein,_barrel-sandwich_domain,_and_Multidrug_efflux_transporter_AcrB_TolC_docking_domain,_DN/DC_subdomains

description:
  Mixed, incl. RND efflux pump, membrane fusion protein, barrel-sandwich domain, and Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains


id: CL:3964
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3964_Mixed,_incl._Multidrug_efflux_transporter_AcrB_TolC_docking_domain,_DN/DC_subdomains,_and_RND_efflux_pump,_membrane_fusion_protein,_barrel-sandwich_domain

description:
  Mixed, incl. Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains, and RND efflux pump, membrane fusion protein, barrel-sandwich domain


id: CL:3966
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3966_Multidrug_efflux_transporter_AcrB_TolC_docking_domain,_DN/DC_subdomains,_and_RND_efflux_pump,_membrane_fusion_protein

description:
  Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains, and RND efflux pump, membrane fusion protein


id: CL:3968
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3968_Multidrug_efflux_transporter_AcrB_TolC_docking_domain,_DN/DC_subdomains,_and_RND_efflux_pump,_membrane_fusion_protein

description:
  Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains, and RND efflux pump, membrane fusion protein


id: CL:3970
description: Hydrophobe/amphiphile efflux-1 HAE1, and RND efflux pump, membrane fusion protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:3970_Hydrophobe/amphiphile_efflux-1_HAE1,_and_RND_efflux_pump,_membrane_fusion_protein


id: CL:402
description: Protein transport by the Sec complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:402_Protein_transport_by_the_Sec_complex


id: CL:4024
description: Fusaric acid resistance protein-like, and Prokaryotic N-terminal methylation motif
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4024_Fusaric_acid_resistance_protein-like,_and_Prokaryotic_N-terminal_methylation_motif


id: CL:4035
description: Iron ion homeostasis, and Cell division site
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4035_Iron_ion_homeostasis,_and_Cell_division_site


id: CL:4052
description: Mixed, incl. Calcium ion binding, and Serine-type endopeptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4052_Mixed,_incl._Calcium_ion_binding,_and_Serine-type_endopeptidase_activity


id: CL:4053
description: Mixed, incl. Calcium ion binding, and Serine-type endopeptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4053_Mixed,_incl._Calcium_ion_binding,_and_Serine-type_endopeptidase_activity


id: CL:4055
description: Mixed, incl. Subtilase family, and PepSY domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4055_Mixed,_incl._Subtilase_family,_and_PepSY_domain


id: CL:4058
description: PepSY domain, and Subtilase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4058_PepSY_domain,_and_Subtilase_family


id: CL:4081
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4081_Mixed,_incl._RTX_calcium-binding_nonapeptide_repeat,_and_Type_I_secretion_membrane_fusion_protein,_HlyD_family

description:
  Mixed, incl. RTX calcium-binding nonapeptide repeat, and Type I secretion membrane fusion protein, HlyD family


id: CL:4083
description: Mixed, incl. Cadherin-like domain, and Type I secretion outer membrane protein, TolC
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4083_Mixed,_incl._Cadherin-like_domain,_and_Type_I_secretion_outer_membrane_protein,_TolC


id: CL:4100
description: Mixed, incl. Peptidase S1C, and Nitrogen utilization
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4100_Mixed,_incl._Peptidase_S1C,_and_Nitrogen_utilization


id: CL:4110
description: Mixed, incl. Starch and sucrose metabolism, and Dicarboxylic acid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4110_Mixed,_incl._Starch_and_sucrose_metabolism,_and_Dicarboxylic_acid_transport


id: CL:4126
description: Mixed, incl. ABC-type transporter activity, and ATP-binding cassette (ABC) transporter complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4126_Mixed,_incl._ABC-type_transporter_activity,_and_ATP-binding_cassette_(ABC)_transporter_complex


id: CL:4127
description: Mixed, incl. Type 1 protein exporter, and ATP-binding cassette (ABC) transporter complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4127_Mixed,_incl._Type_1_protein_exporter,_and_ATP-binding_cassette_(ABC)_transporter_complex


id: CL:4128
description: Mixed, incl. Type 1 protein exporter, and ATP-binding cassette (ABC) transporter complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4128_Mixed,_incl._Type_1_protein_exporter,_and_ATP-binding_cassette_(ABC)_transporter_complex


id: CL:4130
description: Mixed, incl. Type 1 protein exporter, and ABC-2 transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4130_Mixed,_incl._Type_1_protein_exporter,_and_ABC-2_transporter


id: CL:4132
description: Type 1 protein exporter, and ABC-2 transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4132_Type_1_protein_exporter,_and_ABC-2_transporter


id: CL:4134
description: ABC-2 transporter, and Membrane fusion protein, biotin-lipoyl like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4134_ABC-2_transporter,_and_Membrane_fusion_protein,_biotin-lipoyl_like_domain


id: CL:4170
description: Mixed, incl. Dioxygenase, and Methyltransferase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4170_Mixed,_incl._Dioxygenase,_and_Methyltransferase_complex


id: CL:4175
description: Mixed, incl. TauD/TfdA-like domain, and Heme transmembrane transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4175_Mixed,_incl._TauD/TfdA-like_domain,_and_Heme_transmembrane_transport


id: CL:4194
description: Amine oxidase, and Nitrogen utilization
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4194_Amine_oxidase,_and_Nitrogen_utilization


id: CL:4204
description: Toxin-antitoxin complex, and Helix-hairpin-helix DNA-binding motif class 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4204_Toxin-antitoxin_complex,_and_Helix-hairpin-helix_DNA-binding_motif_class_1


id: CL:4214
description: Mixed, incl. LysR, substrate-binding, and DEAD/DEAH box helicase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4214_Mixed,_incl._LysR,_substrate-binding,_and_DEAD/DEAH_box_helicase_domain


id: CL:4215
description: Mixed, incl. LysR, substrate-binding, and Rare lipoprotein A
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4215_Mixed,_incl._LysR,_substrate-binding,_and_Rare_lipoprotein_A


id: CL:4216
description: Mixed, incl. Rare lipoprotein A, and Olefin metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4216_Mixed,_incl._Rare_lipoprotein_A,_and_Olefin_metabolic_process


id: CL:4238
description: Mixed, incl. DEAD/DEAH box helicase domain, and Cytochrome C and Quinol oxidase polypeptide I
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4238_Mixed,_incl._DEAD/DEAH_box_helicase_domain,_and_Cytochrome_C_and_Quinol_oxidase_polypeptide_I


id: CL:424
description: Aminoacyl-tRNA synthetase, class I, conserved site, and prolyl-tRNA aminoacylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:424_Aminoacyl-tRNA_synthetase,_class_I,_conserved_site,_and_prolyl-tRNA_aminoacylation


id: CL:4240
description: Mixed, incl. Dimeric alpha-beta barrel, and Nucleobase catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4240_Mixed,_incl._Dimeric_alpha-beta_barrel,_and_Nucleobase_catabolic_process


id: CL:4258
description: Mixed, incl. Lipid phosphorylation, and Calcineurin-like phosphoesterase superfamily domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4258_Mixed,_incl._Lipid_phosphorylation,_and_Calcineurin-like_phosphoesterase_superfamily_domain


id: CL:426
description: Aminoacyl-tRNA synthetase, class I, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:426_Aminoacyl-tRNA_synthetase,_class_I,_conserved_site


id: CL:4260
description: Mixed, incl. Lipid phosphorylation, and Calcineurin-like phosphoesterase superfamily domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4260_Mixed,_incl._Lipid_phosphorylation,_and_Calcineurin-like_phosphoesterase_superfamily_domain


id: CL:4288
description: Mixed, incl. Major Facilitator Superfamily, and Deaminase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4288_Mixed,_incl._Major_Facilitator_Superfamily,_and_Deaminase_activity


id: CL:4289
description: Mixed, incl. Deaminase activity, and Nucleotide catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4289_Mixed,_incl._Deaminase_activity,_and_Nucleotide_catabolic_process


id: CL:4292
description: Mixed, incl. Nucleotide catabolic process, and Adenosine deaminase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4292_Mixed,_incl._Nucleotide_catabolic_process,_and_Adenosine_deaminase


id: CL:4294
description: Deoxyribonucleotide catabolic process, and Purine-nucleoside phosphorylase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4294_Deoxyribonucleotide_catabolic_process,_and_Purine-nucleoside_phosphorylase_activity


id: CL:4315
description: Sphingolipid metabolic process, and Nicotinate and nicotinamide metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4315_Sphingolipid_metabolic_process,_and_Nicotinate_and_nicotinamide_metabolism


id: CL:4324
description: Mixed, incl. Major Facilitator Superfamily, and alanyl-tRNA aminoacylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4324_Mixed,_incl._Major_Facilitator_Superfamily,_and_alanyl-tRNA_aminoacylation


id: CL:4326
description: Major Facilitator Superfamily, and Malic enzyme, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4326_Major_Facilitator_Superfamily,_and_Malic_enzyme,_conserved_site


id: CL:4348
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4348_Mixed,_incl._alanyl-tRNA_aminoacylation,_and_Intramolecular_oxidoreductase_activity,_transposing_C=C_bonds

description:
  Mixed, incl. alanyl-tRNA aminoacylation, and Intramolecular oxidoreductase activity, transposing C=C bonds


id: CL:4359
description: Mixed, incl. AhpD-like, and Shikimate kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4359_Mixed,_incl._AhpD-like,_and_Shikimate_kinase


id: CL:4370
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4370_Mostly_uncharacterized,_incl._Regulation_of_transcription_by_RNA_polymerase_II,_and_Thioesterase_domain

description:
  Mostly uncharacterized, incl. Regulation of transcription by RNA polymerase II, and Thioesterase domain


id: CL:4371
description: Mixed, incl. Regulation of transcription by RNA polymerase II, and Thioesterase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4371_Mixed,_incl._Regulation_of_transcription_by_RNA_polymerase_II,_and_Thioesterase_domain


id: CL:4372
description: Mixed, incl. Regulation of transcription by RNA polymerase II, and YqgF/RNase H-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4372_Mixed,_incl._Regulation_of_transcription_by_RNA_polymerase_II,_and_YqgF/RNase_H-like_domain


id: CL:4374
description: Mixed, incl. Thiopurine S-methyltransferase (TPMT), and Thioesterase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4374_Mixed,_incl._Thiopurine_S-methyltransferase_(TPMT),_and_Thioesterase_domain


id: CL:4392
description: Mixed, incl. CoA hydrolase activity, and Tetratricopeptide repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4392_Mixed,_incl._CoA_hydrolase_activity,_and_Tetratricopeptide_repeat


id: CL:4404
description: Mixed, incl. Carbon-oxygen lyase activity, acting on phosphates, and Alpha/beta hydrolase fold
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4404_Mixed,_incl._Carbon-oxygen_lyase_activity,_acting_on_phosphates,_and_Alpha/beta_hydrolase_fold


id: CL:4413
description: Mixed, incl. Cyclo-ligase activity, and Formyl transferase, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4413_Mixed,_incl._Cyclo-ligase_activity,_and_Formyl_transferase,_C-terminal


id: CL:4422
description: Mixed, incl. Acyl-CoA N-acyltransferase, and Response to antibiotic
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4422_Mixed,_incl._Acyl-CoA_N-acyltransferase,_and_Response_to_antibiotic


id: CL:4424
description: Mixed, incl. GNAT domain, and DUF34/NIF3 superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4424_Mixed,_incl._GNAT_domain,_and_DUF34/NIF3_superfamily


id: CL:4426
description: Mixed, incl. GNAT domain, and Cyclodipeptide synthase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4426_Mixed,_incl._GNAT_domain,_and_Cyclodipeptide_synthase


id: CL:4428
description: Acetyltransferase (GNAT) domain, and Cyclodipeptide synthase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4428_Acetyltransferase_(GNAT)_domain,_and_Cyclodipeptide_synthase


id: CL:4467
description: Mixed, incl. Cation/H+ exchanger, and Response to antibiotic
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4467_Mixed,_incl._Cation/H+_exchanger,_and_Response_to_antibiotic


id: CL:4487
description: Mixed, incl. Thiamine diphosphate metabolic process, and Major facilitator superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4487_Mixed,_incl._Thiamine_diphosphate_metabolic_process,_and_Major_facilitator_superfamily


id: CL:4488
description: Mixed, incl. Thiamine diphosphate metabolic process, and Suppression of phagosomal maturation
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4488_Mixed,_incl._Thiamine_diphosphate_metabolic_process,_and_Suppression_of_phagosomal_maturation


id: CL:4508
description: Sugar (and other) transporter, and Xenobiotic export from cell
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4508_Sugar_(and_other)_transporter,_and_Xenobiotic_export_from_cell


id: CL:451
description: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity, and Amidase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:451_glutaminyl-tRNA_synthase_(glutamine-hydrolyzing)_activity,_and_Amidase


id: CL:4524
description: Mixed, incl. LicD family, and Cytidylyltransferase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4524_Mixed,_incl._LicD_family,_and_Cytidylyltransferase-like


id: CL:4536
description: Mostly uncharacterized, incl. Amino acid/polyamine transporter I, and Peptidase M28
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4536_Mostly_uncharacterized,_incl._Amino_acid/polyamine_transporter_I,_and_Peptidase_M28


id: CL:4537
description: Mixed, incl. Amino acid/polyamine transporter I, and Peptidase M28
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4537_Mixed,_incl._Amino_acid/polyamine_transporter_I,_and_Peptidase_M28


id: CL:4538
description: Mixed, incl. Amino acid/polyamine transporter I, and Secondary bile acid biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4538_Mixed,_incl._Amino_acid/polyamine_transporter_I,_and_Secondary_bile_acid_biosynthesis


id: CL:4539
description: Mixed, incl. Amino acid/polyamine transporter I, and Secondary bile acid biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4539_Mixed,_incl._Amino_acid/polyamine_transporter_I,_and_Secondary_bile_acid_biosynthesis


id: CL:4540
description: Mixed, incl. Amino acid permease, and POT family
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4540_Mixed,_incl._Amino_acid_permease,_and_POT_family


id: CL:4541
description: Mixed, incl. POT family, and Peptidase propeptide and YPEB domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4541_Mixed,_incl._POT_family,_and_Peptidase_propeptide_and_YPEB_domain


id: CL:4552
description: Mixed, incl. Amino acid permease, and Amino acid permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4552_Mixed,_incl._Amino_acid_permease,_and_Amino_acid_permease


id: CL:4564
description: Amino acid/polyamine transporter I, and Secondary bile acid biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4564_Amino_acid/polyamine_transporter_I,_and_Secondary_bile_acid_biosynthesis


id: CL:4579
description: Mixed, incl. Glutathione synthase activity, and Regulation of nitric oxide metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4579_Mixed,_incl._Glutathione_synthase_activity,_and_Regulation_of_nitric_oxide_metabolic_process


id: CL:4595
description: Mixed, incl. Peptidase M28, and Host cell
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4595_Mixed,_incl._Peptidase_M28,_and_Host_cell


id: CL:4596
description: Mixed, incl. Peptidase M28, and Host cell
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4596_Mixed,_incl._Peptidase_M28,_and_Host_cell


id: CL:4598
description: Peptidase M28, and Calcineurin-like phosphoesterase superfamily domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4598_Peptidase_M28,_and_Calcineurin-like_phosphoesterase_superfamily_domain


id: CL:461
description: Mixed, incl. Peptidase S26, and Transglycosylase SLT domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:461_Mixed,_incl._Peptidase_S26,_and_Transglycosylase_SLT_domain


id: CL:4619
description: Mixed, incl. Peptidase family M20/M25/M40, and HAD-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4619_Mixed,_incl._Peptidase_family_M20/M25/M40,_and_HAD-like_superfamily


id: CL:4629
description: Mixed, incl. Gluconeogenesis, and Amino acid/polyamine transporter 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4629_Mixed,_incl._Gluconeogenesis,_and_Amino_acid/polyamine_transporter_2


id: CL:4650
description: Mixed, incl. Carbonic anhydrase, and Nitrogen metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4650_Mixed,_incl._Carbonic_anhydrase,_and_Nitrogen_metabolism


id: CL:4651
description: Mixed, incl. Carbonic anhydrase, and STAS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4651_Mixed,_incl._Carbonic_anhydrase,_and_STAS_domain


id: CL:4655
description: Carbonic anhydrase, and STAS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4655_Carbonic_anhydrase,_and_STAS_domain


id: CL:4671
description: Mixed, incl. Toluene degradation, and Long-chain fatty acid transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4671_Mixed,_incl._Toluene_degradation,_and_Long-chain_fatty_acid_transporter_activity


id: CL:4680
description: Mixed, incl. NAD-dependent epimerase/dehydratase, and Metal ion transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4680_Mixed,_incl._NAD-dependent_epimerase/dehydratase,_and_Metal_ion_transmembrane_transporter_activity


id: CL:4689
description: Mixed, incl. Queuosine salvage, and Protein acylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4689_Mixed,_incl._Queuosine_salvage,_and_Protein_acylation


id: CL:4701
description: Mixed, incl. MetI-like superfamily, and Amide transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4701_Mixed,_incl._MetI-like_superfamily,_and_Amide_transmembrane_transporter_activity


id: CL:4703
description: MetI-like superfamily, and Amide transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4703_MetI-like_superfamily,_and_Amide_transmembrane_transporter_activity


id: CL:471
description: Mixed, incl. NusB family, and Peptide deformylase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:471_Mixed,_incl._NusB_family,_and_Peptide_deformylase


id: CL:4728
description: Mixed, incl. HIT domain, and Cold shock, CspA
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4728_Mixed,_incl._HIT_domain,_and_Cold_shock,_CspA


id: CL:4746
description: Mostly uncharacterized, incl. Mismatch repair, and GlnD PII-uridylyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4746_Mostly_uncharacterized,_incl._Mismatch_repair,_and_GlnD_PII-uridylyltransferase


id: CL:4747
description: Mixed, incl. Mismatch repair, and DNA alkylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4747_Mixed,_incl._Mismatch_repair,_and_DNA_alkylation


id: CL:4748
description: Mixed, incl. Mismatch repair, and HNH nuclease
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4748_Mixed,_incl._Mismatch_repair,_and_HNH_nuclease


id: CL:4751
description: Mismatch repair, and HNH nuclease
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4751_Mismatch_repair,_and_HNH_nuclease


id: CL:4769
description: Mixed, incl. DNA modification, and Peptidase S49
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4769_Mixed,_incl._DNA_modification,_and_Peptidase_S49


id: CL:4771
description: ProQ/FinO domain, and DNA modification
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4771_ProQ/FinO_domain,_and_DNA_modification


id: CL:4788
description: Mostly uncharacterized, incl. GlnD PII-uridylyltransferase, and Ubiquinone binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4788_Mostly_uncharacterized,_incl._GlnD_PII-uridylyltransferase,_and_Ubiquinone_binding


id: CL:4790
description: Mixed, incl. Ubiquinone binding, and Carboxylic ester hydrolase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4790_Mixed,_incl._Ubiquinone_binding,_and_Carboxylic_ester_hydrolase_activity


id: CL:4805
description: Mixed, incl. GlnD PII-uridylyltransferase, and Regulation of nitrogen utilization
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4805_Mixed,_incl._GlnD_PII-uridylyltransferase,_and_Regulation_of_nitrogen_utilization


id: CL:4819
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4819_Mixed,_incl._Universal_stress_protein_A_family,_and_Long-chain_fatty_acid_transporting_porin_activity

description:
  Mixed, incl. Universal stress protein A family, and Long-chain fatty acid transporting porin activity


id: CL:4820
description: Mixed, incl. Long-chain fatty acid transporting porin activity, and SpoVT-AbrB domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4820_Mixed,_incl._Long-chain_fatty_acid_transporting_porin_activity,_and_SpoVT-AbrB_domain


id: CL:4822
description: Long-chain fatty acid transporting porin activity, and Cellular response to pH
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4822_Long-chain_fatty_acid_transporting_porin_activity,_and_Cellular_response_to_pH


id: CL:483
description: Mixed, incl. RNA degradation, and Pseudouridine synthase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:483_Mixed,_incl._RNA_degradation,_and_Pseudouridine_synthase_activity


id: CL:4838
description: Mixed, incl. SpoVT-AbrB domain, and Lipopolysaccharide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4838_Mixed,_incl._SpoVT-AbrB_domain,_and_Lipopolysaccharide_transport


id: CL:484
description: RNA degradation, and NUDIX domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:484_RNA_degradation,_and_NUDIX_domain


id: CL:4847
description: Mixed, incl. Universal stress protein A family, and Deoxyribose phosphate catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4847_Mixed,_incl._Universal_stress_protein_A_family,_and_Deoxyribose_phosphate_catabolic_process


id: CL:4849
description: Universal stress protein A family
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4849_Universal_stress_protein_A_family


id: CL:485
description: NUDIX domain, and Exoribonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:485_NUDIX_domain,_and_Exoribonuclease_activity


id: CL:4870
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4870_Mostly_uncharacterized,_incl._Protein_of_unknown_function_DUF1328,_and_L,D-transpeptidase_catalytic_domain

description:
  Mostly uncharacterized, incl. Protein of unknown function DUF1328, and L,D-transpeptidase catalytic domain


id: CL:4872
description: Mixed, incl. Protein of unknown function DUF1328, and Bacterial OsmY and nodulation domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4872_Mixed,_incl._Protein_of_unknown_function_DUF1328,_and_Bacterial_OsmY_and_nodulation_domain


id: CL:4873
description: Mixed, incl. Protein of unknown function DUF1328, and Bacterial OsmY and nodulation domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4873_Mixed,_incl._Protein_of_unknown_function_DUF1328,_and_Bacterial_OsmY_and_nodulation_domain


id: CL:4875
description: Mixed, incl. Protein of unknown function DUF1328, and Cell pole
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4875_Mixed,_incl._Protein_of_unknown_function_DUF1328,_and_Cell_pole


id: CL:4896
description: Mixed, incl. Peptidase M48, protease HtpX, putative, and HotDog domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4896_Mixed,_incl._Peptidase_M48,_protease_HtpX,_putative,_and_HotDog_domain_superfamily


id: CL:4911
description: Mixed, incl. L,D-transpeptidase catalytic domain, and tRNA (uracil) methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4911_Mixed,_incl._L,D-transpeptidase_catalytic_domain,_and_tRNA_(uracil)_methyltransferase_activity


id: CL:4913
description: Mixed, incl. L,D-transpeptidase catalytic domain, and tRNA (uracil) methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4913_Mixed,_incl._L,D-transpeptidase_catalytic_domain,_and_tRNA_(uracil)_methyltransferase_activity


id: CL:4933
description: Mixed, incl. Acyltransferase family, and AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4933_Mixed,_incl._Acyltransferase_family,_and_AAA_domain


id: CL:4935
description: Mixed, incl. Acyltransferase family, and AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4935_Mixed,_incl._Acyltransferase_family,_and_AAA_domain


id: CL:4936
description: Mixed, incl. SGNH domain, and AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4936_Mixed,_incl._SGNH_domain,_and_AAA_domain


id: CL:4950
description: Mixed, incl. Menaquinone metabolic process, and Acyltransferase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4950_Mixed,_incl._Menaquinone_metabolic_process,_and_Acyltransferase_family


id: CL:4963
description: Mixed, incl. RNA capping, and Dbl homology (DH) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4963_Mixed,_incl._RNA_capping,_and_Dbl_homology_(DH)_domain


id: CL:4976
description: Mixed, incl. RimK-like ATP-grasp domain, and Aspartic peptidase domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4976_Mixed,_incl._RimK-like_ATP-grasp_domain,_and_Aspartic_peptidase_domain_superfamily


id: CL:498
description: mRNA metabolic process, and RNA helicase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:498_mRNA_metabolic_process,_and_RNA_helicase_activity


id: CL:4997
description: Mostly uncharacterized, incl. SbmA/BacA-like family, and NfeD-like C-terminal, partner-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4997_Mostly_uncharacterized,_incl._SbmA/BacA-like_family,_and_NfeD-like_C-terminal,_partner-binding


id: CL:4999
description: Mixed, incl. NfeD-like C-terminal, partner-binding, and Stomatin/HflK family
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:4999_Mixed,_incl._NfeD-like_C-terminal,_partner-binding,_and_Stomatin/HflK_family


id: CL:5001
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:5001_Legionella_pneumophila_major_outer_membrane_protein_precursor,_and_NfeD-like_C-terminal,_partner-binding

description:
  Legionella pneumophila major outer membrane protein precursor, and NfeD-like C-terminal, partner-binding


id: CL:5032
description: Mixed, incl. Dicarboxylic acid transport, and Major facilitator, sugar transporter-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:5032_Mixed,_incl._Dicarboxylic_acid_transport,_and_Major_facilitator,_sugar_transporter-like


id: CL:5034
description: Mixed, incl. Dicarboxylic acid transport, and Major facilitator, sugar transporter-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:5034_Mixed,_incl._Dicarboxylic_acid_transport,_and_Major_facilitator,_sugar_transporter-like


id: CL:5057
description: Mixed, incl. DNA binding, and HipA-like, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:5057_Mixed,_incl._DNA_binding,_and_HipA-like,_C-terminal


id: CL:5058
description: Mixed, incl. DNA binding, and HipA-like, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:5058_Mixed,_incl._DNA_binding,_and_HipA-like,_C-terminal


id: CL:5059
description: Mixed, incl. DNA binding, and HipA-like, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:5059_Mixed,_incl._DNA_binding,_and_HipA-like,_C-terminal


id: CL:5060
description: Mixed, incl. Lambda repressor-like, DNA-binding domain superfamily, and HipA-like, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:5060_Mixed,_incl._Lambda_repressor-like,_DNA-binding_domain_superfamily,_and_HipA-like,_C-terminal


id: CL:5061
description: Mixed, incl. Lambda repressor-like, DNA-binding domain superfamily, and HipA-like, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:5061_Mixed,_incl._Lambda_repressor-like,_DNA-binding_domain_superfamily,_and_HipA-like,_C-terminal


id: CL:5063
description: Mixed, incl. HipA-like, C-terminal, and Lambda repressor-like, DNA-binding domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:5063_Mixed,_incl._HipA-like,_C-terminal,_and_Lambda_repressor-like,_DNA-binding_domain_superfamily


id: CL:5066
description: HipA-like, C-terminal, and Lambda repressor-like, DNA-binding domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:5066_HipA-like,_C-terminal,_and_Lambda_repressor-like,_DNA-binding_domain_superfamily


id: CL:5067
description: HipA N-terminal domain, and Helix-turn-helix XRE-family like proteins
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:5067_HipA_N-terminal_domain,_and_Helix-turn-helix_XRE-family_like_proteins


id: CL:5078
description: HipA-like, C-terminal, and Lambda repressor-like, DNA-binding domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:5078_HipA-like,_C-terminal,_and_Lambda_repressor-like,_DNA-binding_domain_superfamily


id: CL:508
description: Mixed, incl. Pseudouridine synthase activity, and DbpA RNA binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:508_Mixed,_incl._Pseudouridine_synthase_activity,_and_DbpA_RNA_binding_domain


id: CL:5096
description: Fido domain, and Arm DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:5096_Fido_domain,_and_Arm_DNA-binding_domain


id: CL:5118
description: Mixed, incl. Toxin-antitoxin complex, and Transposase, Tn5-like, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:5118_Mixed,_incl._Toxin-antitoxin_complex,_and_Transposase,_Tn5-like,_C-terminal


id: CL:5119
description: Mixed, incl. Transposase, Tn5-like, C-terminal, and TTHA1013/TTHA0281-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:5119_Mixed,_incl._Transposase,_Tn5-like,_C-terminal,_and_TTHA1013/TTHA0281-like


id: CL:5121
description: Mixed, incl. Transposase DNA-binding, and Schlafen, AlbA_2 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:5121_Mixed,_incl._Transposase_DNA-binding,_and_Schlafen,_AlbA_2_domain


id: CL:5144
description: Mixed, incl. Toxin-antitoxin complex, and Toxin-antitoxin system, RelE/ParE toxin family
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:5144_Mixed,_incl._Toxin-antitoxin_complex,_and_Toxin-antitoxin_system,_RelE/ParE_toxin_family


id: CL:5146
description: Mixed, incl. Toxin-antitoxin complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:5146_Mixed,_incl._Toxin-antitoxin_complex


id: CL:5166
description: Mixed, incl. DNA primase activity, and DNA integration
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:5166_Mixed,_incl._DNA_primase_activity,_and_DNA_integration


id: CL:5167
description: Mixed, incl. DNA primase activity, and Integrase, DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:5167_Mixed,_incl._DNA_primase_activity,_and_Integrase,_DNA-binding_domain


id: CL:5169
description: Mixed, incl. Integrase, DNA-binding domain, and DNA primase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:5169_Mixed,_incl._Integrase,_DNA-binding_domain,_and_DNA_primase_activity


id: CL:5170
description: Mixed, incl. Integrase, DNA-binding domain, and DNA primase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:5170_Mixed,_incl._Integrase,_DNA-binding_domain,_and_DNA_primase_activity


id: CL:5173
description: DNA primase activity, and Prophage CP4-57 regulatory protein (AlpA)
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:5173_DNA_primase_activity,_and_Prophage_CP4-57_regulatory_protein_(AlpA)


id: CL:5194
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:5194_Mixed,_incl._Prophage_CP4-57_regulatory_protein_(AlpA),_and_Archaeal_primase_DnaG/twinkle-like,_TOPRIM_domain

description:
  Mixed, incl. Prophage CP4-57 regulatory protein (AlpA), and Archaeal primase DnaG/twinkle-like, TOPRIM domain


id: CL:5221
description: Mixed, incl. Homeobox-like domain superfamily, and Transposase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:5221_Mixed,_incl._Homeobox-like_domain_superfamily,_and_Transposase_activity


id: CL:5240
description: Mixed, incl. Outer membrane protein beta-barrel domain, and Schlafen, AlbA_2 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:5240_Mixed,_incl._Outer_membrane_protein_beta-barrel_domain,_and_Schlafen,_AlbA_2_domain


id: CL:5257
description: Mixed, incl. OsmC/Ohr family, and Methyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:5257_Mixed,_incl._OsmC/Ohr_family,_and_Methyltransferase


id: CL:5267
description: Mostly uncharacterized, incl. N-acetyltransferase activity, and OsmC/Ohr family
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:5267_Mostly_uncharacterized,_incl._N-acetyltransferase_activity,_and_OsmC/Ohr_family


id: CL:5268
description: Mixed, incl. N-acetyltransferase activity, and Cell-cell signaling
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:5268_Mixed,_incl._N-acetyltransferase_activity,_and_Cell-cell_signaling


id: CL:5269
description: Mixed, incl. N-acetyltransferase activity, and Cell-cell signaling
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:5269_Mixed,_incl._N-acetyltransferase_activity,_and_Cell-cell_signaling


id: CL:5271
description: Mixed, incl. Cell-cell signaling, and Alanine racemase, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:5271_Mixed,_incl._Cell-cell_signaling,_and_Alanine_racemase,_N-terminal


id: CL:5293
description: Mixed, incl. START-like domain superfamily, and Listeria monocytogenes entry into host cells
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:5293_Mixed,_incl._START-like_domain_superfamily,_and_Listeria_monocytogenes_entry_into_host_cells


id: CL:5324
description: Mostly uncharacterized, incl. ArsC family, and Homoserine kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:5324_Mostly_uncharacterized,_incl._ArsC_family,_and_Homoserine_kinase_activity


id: CL:5325
description: Mixed, incl. ArsC family, and Phosphotransferase enzyme family
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:5325_Mixed,_incl._ArsC_family,_and_Phosphotransferase_enzyme_family


id: CL:5336
description: Mixed, incl. Homoserine kinase activity, and Thiosulfate sulfurtransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:5336_Mixed,_incl._Homoserine_kinase_activity,_and_Thiosulfate_sulfurtransferase_activity


id: CL:534
description: Mixed, incl. tRNA methylation, and Fluoride transmembrane transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:534_Mixed,_incl._tRNA_methylation,_and_Fluoride_transmembrane_transport


id: CL:5355
description: Mixed, incl. Pirin, and WH2 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:5355_Mixed,_incl._Pirin,_and_WH2_domain


id: CL:5369
description: Mixed, incl. Sporulation, and AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:5369_Mixed,_incl._Sporulation,_and_AAA_domain


id: CL:5372
description: Mixed, incl. AAA domain, and Von Willebrand factor A-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:5372_Mixed,_incl._AAA_domain,_and_Von_Willebrand_factor_A-like_domain_superfamily


id: CL:5387
description: Sporulation, and Protein of unknown function DUF4949
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:5387_Sporulation,_and_Protein_of_unknown_function_DUF4949


id: CL:5403
description: Apolipoprotein N-acyltransferase, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:5403_Apolipoprotein_N-acyltransferase,_and_Signal


id: CL:546
description: Mixed, incl. Methyltransferase HemK-like, and Peptide chain release factor
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:546_Mixed,_incl._Methyltransferase_HemK-like,_and_Peptide_chain_release_factor


id: CL:5522
description: Mixed, incl. Tetratricopeptide-like helical domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:5522_Mixed,_incl._Tetratricopeptide-like_helical_domain_superfamily


id: CL:556
description: Mixed, incl. Acetate metabolic process, and lysyl-tRNA aminoacylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:556_Mixed,_incl._Acetate_metabolic_process,_and_lysyl-tRNA_aminoacylation


id: CL:565
description: Mixed, incl. ParB/Sulfiredoxin, and VirC1 protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:565_Mixed,_incl._ParB/Sulfiredoxin,_and_VirC1_protein


id: CL:567
description: Mixed, incl. Protein carrier chaperone, and rRNA (guanine-N7)-methylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:567_Mixed,_incl._Protein_carrier_chaperone,_and_rRNA_(guanine-N7)-methylation


id: CL:583
description: ParB/Sulfiredoxin, and VirC1 protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:583_ParB/Sulfiredoxin,_and_VirC1_protein


id: CL:595
description: Mixed, incl. Queuosine metabolic process, and RelA/SpoT
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:595_Mixed,_incl._Queuosine_metabolic_process,_and_RelA/SpoT


id: CL:598
description: Mixed, incl. RelA/SpoT, and ABC transporter Uup, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:598_Mixed,_incl._RelA/SpoT,_and_ABC_transporter_Uup,_C-terminal


id: CL:624
description: Mixed, incl. Ankyrin repeat-containing domain superfamily, and Protein folding
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:624_Mixed,_incl._Ankyrin_repeat-containing_domain_superfamily,_and_Protein_folding


id: CL:625
description: Mixed, incl. Ankyrin repeat-containing domain superfamily, and Protein folding
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:625_Mixed,_incl._Ankyrin_repeat-containing_domain_superfamily,_and_Protein_folding


id: CL:626
description: Mixed, incl. Ankyrin repeat-containing domain superfamily, and Protein folding
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:626_Mixed,_incl._Ankyrin_repeat-containing_domain_superfamily,_and_Protein_folding


id: CL:627
description: Mixed, incl. ANK repeat, and UMP salvage
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:627_Mixed,_incl._ANK_repeat,_and_UMP_salvage


id: CL:629
description: Mixed, incl. ANK repeat, and Class I MHC mediated antigen processing & presentation
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:629_Mixed,_incl._ANK_repeat,_and_Class_I_MHC_mediated_antigen_processing_&_presentation


id: CL:631
description: ANK repeat, and Xylan metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:631_ANK_repeat,_and_Xylan_metabolic_process


id: CL:633
description: ANK repeat, and bis(5-nucleosyl)-tetraphosphatase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:633_ANK_repeat,_and_bis(5-nucleosyl)-tetraphosphatase_activity


id: CL:651
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:651_Mixed,_incl._bis(5-nucleosyl)-tetraphosphatase_activity,_and_FKBP-type_peptidyl-prolyl_cis-trans_isomerase

description:
  Mixed, incl. bis(5-nucleosyl)-tetraphosphatase activity, and FKBP-type peptidyl-prolyl cis-trans isomerase


id: CL:675
description: Class I MHC mediated antigen processing & presentation, and Protein kinase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:675_Class_I_MHC_mediated_antigen_processing_&_presentation,_and_Protein_kinase_domain


id: CL:694
description: Protein folding, and Protein catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:694_Protein_folding,_and_Protein_catabolic_process


id: CL:695
description: Protein folding, and Protein catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:695_Protein_folding,_and_Protein_catabolic_process


id: CL:698
description: Protein folding, and HslUV protease complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:698_Protein_folding,_and_HslUV_protease_complex


id: CL:701
description: Chaperone, and Proteolysis involved in protein catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:701_Chaperone,_and_Proteolysis_involved_in_protein_catabolic_process


id: CL:705
description: Protein folding chaperone, and Chaperone binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:705_Protein_folding_chaperone,_and_Chaperone_binding


id: CL:743
description: Band 7 domain, and ATP-dependent peptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:743_Band_7_domain,_and_ATP-dependent_peptidase_activity


id: CL:755
description: Mixed, incl. Xylan metabolic process, and Glycosyl transferase family 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:755_Mixed,_incl._Xylan_metabolic_process,_and_Glycosyl_transferase_family_2


id: CL:776
description: Von Willebrand factor A-like domain superfamily, and Tetratricopeptide repeat 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:776_Von_Willebrand_factor_A-like_domain_superfamily,_and_Tetratricopeptide_repeat_1


id: CL:789
description: Catalytic activity, acting on DNA, and Horizontal gene transfer
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:789_Catalytic_activity,_acting_on_DNA,_and_Horizontal_gene_transfer


id: CL:790
description: Catalytic activity, acting on DNA, and Horizontal gene transfer
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:790_Catalytic_activity,_acting_on_DNA,_and_Horizontal_gene_transfer


id: CL:791
description: Catalytic activity, acting on DNA, and Horizontal gene transfer
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:791_Catalytic_activity,_acting_on_DNA,_and_Horizontal_gene_transfer


id: CL:793
description: Catalytic activity, acting on DNA, and LexA-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:793_Catalytic_activity,_acting_on_DNA,_and_LexA-like


id: CL:795
description: Catalytic activity, acting on DNA, and LexA-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:795_Catalytic_activity,_acting_on_DNA,_and_LexA-like


id: CL:796
description: Nucleotide excision repair, and Damaged DNA binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:796_Nucleotide_excision_repair,_and_Damaged_DNA_binding


id: CL:797
description: Mixed, incl. Damaged DNA binding, and DEAD-like helicases superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:797_Mixed,_incl._Damaged_DNA_binding,_and_DEAD-like_helicases_superfamily


id: CL:799
description: DEAD-like helicases superfamily, and DNA-directed DNA polymerase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:799_DEAD-like_helicases_superfamily,_and_DNA-directed_DNA_polymerase


id: CL:802
description: DNA-directed DNA polymerase activity, and DEAD-like helicases superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:802_DNA-directed_DNA_polymerase_activity,_and_DEAD-like_helicases_superfamily


id: CL:825
description: DNA recombination and repair protein RecA-like, ATP-binding domain, and LexA-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:825_DNA_recombination_and_repair_protein_RecA-like,_ATP-binding_domain,_and_LexA-like


id: CL:835
description: DNA excision, and DNA ligase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:835_DNA_excision,_and_DNA_ligase_activity


id: CL:878
description: Horizontal gene transfer, and tRNA endonuclease-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:878_Horizontal_gene_transfer,_and_tRNA_endonuclease-like_domain_superfamily


id: CL:891
description: DNA topoisomerase, type IIA-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:891_DNA_topoisomerase,_type_IIA-like_domain_superfamily


id: CL:902
description: Base excision repair, and HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:902_Base_excision_repair,_and_HTH_domain


id: CL:904
description: AP endonuclease 1, and Helix-hairpin-helix motif
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:904_AP_endonuclease_1,_and_Helix-hairpin-helix_motif


id: CL:929
description: Mixed, incl. Chromosome partition, and PHP domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:929_Mixed,_incl._Chromosome_partition,_and_PHP_domain


id: CL:947
description: Cellular amino acid biosynthetic process, and Nucleotide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:947_Cellular_amino_acid_biosynthetic_process,_and_Nucleotide_biosynthetic_process


id: CL:948
description: Cellular amino acid biosynthetic process, and Nucleotide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:948_Cellular_amino_acid_biosynthetic_process,_and_Nucleotide_biosynthetic_process


id: CL:949
description: Amino-acid biosynthesis, and Nucleoside monophosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:949_Amino-acid_biosynthesis,_and_Nucleoside_monophosphate_biosynthetic_process


id: CL:950
description: Amino-acid biosynthesis, and Phenylalanine, tyrosine and tryptophan biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:950_Amino-acid_biosynthesis,_and_Phenylalanine,_tyrosine_and_tryptophan_biosynthesis


id: CL:951
description: Phenylalanine, tyrosine and tryptophan biosynthesis, and Histidine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:951_Phenylalanine,_tyrosine_and_tryptophan_biosynthesis,_and_Histidine_biosynthesis


id: CL:953
description: Aromatic amino acid biosynthesis, and ADC synthase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122169_STRINGid_CL:953_Aromatic_amino_acid_biosynthesis,_and_ADC_synthase


id: GO:0000701
description: Purine-specific mismatch base pair DNA N-glycosylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0000701
golevel: 6
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0000701_Purine-specific_mismatch_base_pair_DNA_N-glycosylase_activity


id: GO:0000716
description: Transcription-coupled nucleotide-excision repair, DNA damage recognition
memo: https://amigo.geneontology.org/amigo/term/GO:0000716
golevel: 7
name:
  GOBP.STRING_v12.0_1122169_STRINGid_GO:0000716_Transcription-coupled_nucleotide-excision_repair,_DNA_damage_recognition


id: GO:0000724
description: Double-strand break repair via homologous recombination
memo: https://amigo.geneontology.org/amigo/term/GO:0000724
golevel: 7
name:
  GOBP.STRING_v12.0_1122169_STRINGid_GO:0000724_Double-strand_break_repair_via_homologous_recombination


id: GO:0000820
description: Regulation of glutamine family amino acid metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0000820
name:
  GOBP.STRING_v12.0_1122169_STRINGid_GO:0000820_Regulation_of_glutamine_family_amino_acid_metabolic_process


id: GO:0001073
description: Transcription antitermination factor activity, DNA binding
memo: https://amigo.geneontology.org/amigo/term/GO:0001073
golevel: 2
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0001073_Transcription_antitermination_factor_activity,_DNA_binding


id: GO:0003848
description: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003848
golevel: 5
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0003848_2-amino-4-hydroxy-6-hydroxymethyldihydropteridine_diphosphokinase_activity


id: GO:0003864
description: 3-methyl-2-oxobutanoate hydroxymethyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003864
golevel: 5
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0003864_3-methyl-2-oxobutanoate_hydroxymethyltransferase_activity


id: GO:0003882
description: CDP-diacylglycerol-serine O-phosphatidyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003882
golevel: 6
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0003882_CDP-diacylglycerol-serine_O-phosphatidyltransferase_activity


id: GO:0003906
description: DNA-(apurinic or apyrimidinic site) endonuclease activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003906
golevel: 6
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0003906_DNA-(apurinic_or_apyrimidinic_site)_endonuclease_activity


id: GO:0003908
description: methylated-DNA-[protein]-cysteine S-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003908
golevel: 4
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0003908_methylated-DNA-[protein]-cysteine_S-methyltransferase_activity


id: GO:0003917
description: DNA topoisomerase type I (single strand cut, ATP-independent) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003917
golevel: 5
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0003917_DNA_topoisomerase_type_I_(single_strand_cut,_ATP-independent)_activity


id: GO:0003918
description: DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003918
golevel: 3
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0003918_DNA_topoisomerase_type_II_(double_strand_cut,_ATP-hydrolyzing)_activity


id: GO:0003949
memo: https://amigo.geneontology.org/amigo/term/GO:0003949
golevel: 5
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0003949_1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide_isomerase_activity

description:
  1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity


id: GO:0004015
description: adenosylmethionine-8-amino-7-oxononanoate transaminase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004015
golevel: 5
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0004015_adenosylmethionine-8-amino-7-oxononanoate_transaminase_activity


id: GO:0004018
description: N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004018
golevel: 5
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0004018_N6-(1,2-dicarboxyethyl)AMP_AMP-lyase_(fumarate-forming)_activity


id: GO:0004081
description: bis(5-nucleosyl)-tetraphosphatase (asymmetrical) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004081
golevel: 7
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0004081_bis(5-nucleosyl)-tetraphosphatase_(asymmetrical)_activity


id: GO:0004088
description: Carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004088
golevel: 5
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0004088_Carbamoyl-phosphate_synthase_(glutamine-hydrolyzing)_activity


id: GO:0004149
description: Dihydrolipoyllysine-residue succinyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004149
golevel: 3
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0004149_Dihydrolipoyllysine-residue_succinyltransferase_activity


id: GO:0004174
description: Electron-transferring-flavoprotein dehydrogenase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004174
golevel: 2
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0004174_Electron-transferring-flavoprotein_dehydrogenase_activity


id: GO:0004316
description: 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004316
golevel: 5
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0004316_3-oxoacyl-[acyl-carrier-protein]_reductase_(NADPH)_activity


id: GO:0004317
description: 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004317
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0004317_3-hydroxypalmitoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0004318
description: Enoyl-[acyl-carrier-protein] reductase (NADH) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004318
golevel: 6
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0004318_Enoyl-[acyl-carrier-protein]_reductase_(NADH)_activity


id: GO:0004360
description: glutamine-fructose-6-phosphate transaminase (isomerizing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004360
golevel: 6
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0004360_glutamine-fructose-6-phosphate_transaminase_(isomerizing)_activity


id: GO:0004365
description: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004365
golevel: 6
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0004365_glyceraldehyde-3-phosphate_dehydrogenase_(NAD+)_(phosphorylating)_activity


id: GO:0004395
description: Hexaprenyldihydroxybenzoate methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004395
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0004395_Hexaprenyldihydroxybenzoate_methyltransferase_activity


id: GO:0004471
description: Malate dehydrogenase (decarboxylating) (NAD+) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004471
golevel: 5
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0004471_Malate_dehydrogenase_(decarboxylating)_(NAD+)_activity


id: GO:0004486
description: Methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004486
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0004486_Methylenetetrahydrofolate_dehydrogenase_[NAD(P)+]_activity


id: GO:0004488
description: Methylenetetrahydrofolate dehydrogenase (NADP+) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004488
golevel: 5
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0004488_Methylenetetrahydrofolate_dehydrogenase_(NADP+)_activity


id: GO:0004491
description: Methylmalonate-semialdehyde dehydrogenase (acylating) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004491
golevel: 5
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0004491_Methylmalonate-semialdehyde_dehydrogenase_(acylating)_activity


id: GO:0004514
description: Nicotinate-nucleotide diphosphorylase (carboxylating) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004514
golevel: 5
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0004514_Nicotinate-nucleotide_diphosphorylase_(carboxylating)_activity


id: GO:0004591
description: Oxoglutarate dehydrogenase (succinyl-transferring) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004591
golevel: 5
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0004591_Oxoglutarate_dehydrogenase_(succinyl-transferring)_activity


id: GO:0004639
description: Phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004639
golevel: 5
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0004639_Phosphoribosylaminoimidazolesuccinocarboxamide_synthase_activity


id: GO:0004641
description: Phosphoribosylformylglycinamidine cyclo-ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004641
golevel: 5
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0004641_Phosphoribosylformylglycinamidine_cyclo-ligase_activity


id: GO:0004643
description: Phosphoribosylaminoimidazolecarboxamide formyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004643
golevel: 5
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0004643_Phosphoribosylaminoimidazolecarboxamide_formyltransferase_activity


id: GO:0004648
description: O-phospho-L-serine:2-oxoglutarate aminotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004648
golevel: 5
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0004648_O-phospho-L-serine:2-oxoglutarate_aminotransferase_activity


id: GO:0004719
description: protein-L-isoaspartate (D-aspartate) O-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004719
golevel: 5
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0004719_protein-L-isoaspartate_(D-aspartate)_O-methyltransferase_activity


id: GO:0004742
description: Dihydrolipoyllysine-residue acetyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004742
golevel: 3
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0004742_Dihydrolipoyllysine-residue_acetyltransferase_activity


id: GO:0004748
description: Ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0004748
golevel: 6
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0004748_Ribonucleoside-diphosphate_reductase_activity,_thioredoxin_disulfide_as_acceptor


id: GO:0004808
description: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004808
golevel: 6
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0004808_tRNA_(5-methylaminomethyl-2-thiouridylate)-methyltransferase_activity


id: GO:0005315
description: Inorganic phosphate transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0005315
golevel: 5
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0005315_Inorganic_phosphate_transmembrane_transporter_activity


id: GO:0005346
description: Purine ribonucleotide transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0005346
golevel: 4
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0005346_Purine_ribonucleotide_transmembrane_transporter_activity


id: GO:0006303
description: Double-strand break repair via nonhomologous end joining
memo: https://amigo.geneontology.org/amigo/term/GO:0006303
golevel: 7
name:
  GOBP.STRING_v12.0_1122169_STRINGid_GO:0006303_Double-strand_break_repair_via_nonhomologous_end_joining


id: GO:0006515
description: Protein quality control for misfolded or incompletely synthesized proteins
memo: https://amigo.geneontology.org/amigo/term/GO:0006515
golevel: 7
name:
  GOBP.STRING_v12.0_1122169_STRINGid_GO:0006515_Protein_quality_control_for_misfolded_or_incompletely_synthesized_proteins


id: GO:0006614
description: SRP-dependent cotranslational protein targeting to membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0006614
golevel: 6
name:
  GOBP.STRING_v12.0_1122169_STRINGid_GO:0006614_SRP-dependent_cotranslational_protein_targeting_to_membrane


id: GO:0006616
description: SRP-dependent cotranslational protein targeting to membrane, translocation
memo: https://amigo.geneontology.org/amigo/term/GO:0006616
golevel: 5
name:
  GOBP.STRING_v12.0_1122169_STRINGid_GO:0006616_SRP-dependent_cotranslational_protein_targeting_to_membrane,_translocation


id: GO:0008028
description: Monocarboxylic acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008028
golevel: 4
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0008028_Monocarboxylic_acid_transmembrane_transporter_activity


id: GO:0008124
description: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008124
golevel: 5
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0008124_4-alpha-hydroxytetrahydrobiopterin_dehydratase_activity


id: GO:0008271
description: Secondary active sulfate transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008271
golevel: 5
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0008271_Secondary_active_sulfate_transmembrane_transporter_activity


id: GO:0008425
description: 2-polyprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008425
golevel: 6
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0008425_2-polyprenyl-6-methoxy-1,4-benzoquinone_methyltransferase_activity


id: GO:0008444
description: CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008444
golevel: 6
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0008444_CDP-diacylglycerol-glycerol-3-phosphate_3-phosphatidyltransferase_activity


id: GO:0008534
description: Oxidized purine nucleobase lesion DNA N-glycosylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008534
golevel: 6
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0008534_Oxidized_purine_nucleobase_lesion_DNA_N-glycosylase_activity


id: GO:0008657
description: DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) inhibitor activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008657
golevel: 4
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0008657_DNA_topoisomerase_type_II_(double_strand_cut,_ATP-hydrolyzing)_inhibitor_activity


id: GO:0008659
description: (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008659
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0008659_(3R)-hydroxymyristoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0008666
description: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008666
golevel: 7
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0008666_2,3,4,5-tetrahydropyridine-2,6-dicarboxylate_N-succinyltransferase_activity


id: GO:0008686
description: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008686
golevel: 4
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0008686_3,4-dihydroxy-2-butanone-4-phosphate_synthase_activity


id: GO:0008690
description: 3-deoxy-manno-octulosonate cytidylyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008690
golevel: 6
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0008690_3-deoxy-manno-octulosonate_cytidylyltransferase_activity


id: GO:0008693
description: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008693
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0008693_3-hydroxydecanoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0008703
description: 5-amino-6-(5-phosphoribosylamino)uracil reductase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008703
golevel: 5
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0008703_5-amino-6-(5-phosphoribosylamino)uracil_reductase_activity


id: GO:0008713
description: ADP-heptose-lipopolysaccharide heptosyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008713
golevel: 5
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0008713_ADP-heptose-lipopolysaccharide_heptosyltransferase_activity


id: GO:0008757
description: S-adenosylmethionine-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008757
golevel: 5
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0008757_S-adenosylmethionine-dependent_methyltransferase_activity


id: GO:0008759
description: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008759
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0008759_UDP-3-O-[3-hydroxymyristoyl]_N-acetylglucosamine_deacetylase_activity


id: GO:0008760
description: UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008760
golevel: 4
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0008760_UDP-N-acetylglucosamine_1-carboxyvinyltransferase_activity


id: GO:0008764
description: UDP-N-acetylmuramoylalanine-D-glutamate ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008764
golevel: 5
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0008764_UDP-N-acetylmuramoylalanine-D-glutamate_ligase_activity


id: GO:0008765
description: UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008765
golevel: 5
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0008765_UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate_ligase_activity


id: GO:0008766
description: UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008766
golevel: 5
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0008766_UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine_ligase_activity


id: GO:0008780
description: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008780
golevel: 6
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0008780_acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine_O-acyltransferase_activity


id: GO:0008803
description: bis(5-nucleosyl)-tetraphosphatase (symmetrical) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008803
golevel: 7
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0008803_bis(5-nucleosyl)-tetraphosphatase_(symmetrical)_activity


id: GO:0008835
description: Diaminohydroxyphosphoribosylaminopyrimidine deaminase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008835
golevel: 5
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0008835_Diaminohydroxyphosphoribosylaminopyrimidine_deaminase_activity


id: GO:0008882
description: [Glutamate-ammonia-ligase] adenylyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008882
golevel: 6
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0008882_[Glutamate-ammonia-ligase]_adenylyltransferase_activity


id: GO:0008893
description: guanosine-3,5-bis(diphosphate) 3-diphosphatase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008893
golevel: 6
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0008893_guanosine-3,5-bis(diphosphate)_3-diphosphatase_activity


id: GO:0008961
description: Phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008961
golevel: 3
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0008961_Phosphatidylglycerol-prolipoprotein_diacylglyceryl_transferase_activity


id: GO:0008963
description: phospho-N-acetylmuramoyl-pentapeptide-transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008963
golevel: 5
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0008963_phospho-N-acetylmuramoyl-pentapeptide-transferase_activity


id: GO:0008965
description: Phosphoenolpyruvate-protein phosphotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008965
golevel: 5
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0008965_Phosphoenolpyruvate-protein_phosphotransferase_activity


id: GO:0008999
description: Ribosomal protein S5-alanine N-acetyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008999
golevel: 6
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0008999_Ribosomal_protein_S5-alanine_N-acetyltransferase_activity


id: GO:0009007
description: Site-specific DNA-methyltransferase (adenine-specific) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0009007
golevel: 5
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0009007_Site-specific_DNA-methyltransferase_(adenine-specific)_activity


id: GO:0009013
description: Succinate-semialdehyde dehydrogenase [NAD(P)+] activity
memo: https://amigo.geneontology.org/amigo/term/GO:0009013
golevel: 5
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0009013_Succinate-semialdehyde_dehydrogenase_[NAD(P)+]_activity


id: GO:0009095
description: Aromatic amino acid family biosynthetic process, prephenate pathway
memo: https://amigo.geneontology.org/amigo/term/GO:0009095
golevel: 7
name:
  GOBP.STRING_v12.0_1122169_STRINGid_GO:0009095_Aromatic_amino_acid_family_biosynthetic_process,_prephenate_pathway


id: GO:0009130
description: Pyrimidine nucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009130
golevel: 7
name:
  GOBP.STRING_v12.0_1122169_STRINGid_GO:0009130_Pyrimidine_nucleoside_monophosphate_biosynthetic_process


id: GO:0009139
description: Pyrimidine nucleoside diphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009139
golevel: 7
name:
  GOBP.STRING_v12.0_1122169_STRINGid_GO:0009139_Pyrimidine_nucleoside_diphosphate_biosynthetic_process


id: GO:0009148
description: Pyrimidine nucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009148
golevel: 7
name:
  GOBP.STRING_v12.0_1122169_STRINGid_GO:0009148_Pyrimidine_nucleoside_triphosphate_biosynthetic_process


id: GO:0009157
description: Deoxyribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009157
golevel: 7
name:
  GOBP.STRING_v12.0_1122169_STRINGid_GO:0009157_Deoxyribonucleoside_monophosphate_biosynthetic_process


id: GO:0009168
description: Purine ribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009168
golevel: 8
name:
  GOBP.STRING_v12.0_1122169_STRINGid_GO:0009168_Purine_ribonucleoside_monophosphate_biosynthetic_process


id: GO:0009173
description: Pyrimidine ribonucleoside monophosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009173
golevel: 8
name:
  GOBP.STRING_v12.0_1122169_STRINGid_GO:0009173_Pyrimidine_ribonucleoside_monophosphate_metabolic_process


id: GO:0009174
description: Pyrimidine ribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009174
golevel: 8
name:
  GOBP.STRING_v12.0_1122169_STRINGid_GO:0009174_Pyrimidine_ribonucleoside_monophosphate_biosynthetic_process


id: GO:0009175
description: Pyrimidine ribonucleoside monophosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009175
golevel: 8
name:
  GOBP.STRING_v12.0_1122169_STRINGid_GO:0009175_Pyrimidine_ribonucleoside_monophosphate_catabolic_process


id: GO:0009176
description: Pyrimidine deoxyribonucleoside monophosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009176
golevel: 8
name:
  GOBP.STRING_v12.0_1122169_STRINGid_GO:0009176_Pyrimidine_deoxyribonucleoside_monophosphate_metabolic_process


id: GO:0009177
description: Pyrimidine deoxyribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009177
golevel: 8
name:
  GOBP.STRING_v12.0_1122169_STRINGid_GO:0009177_Pyrimidine_deoxyribonucleoside_monophosphate_biosynthetic_process


id: GO:0009196
description: Pyrimidine deoxyribonucleoside diphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009196
golevel: 8
name:
  GOBP.STRING_v12.0_1122169_STRINGid_GO:0009196_Pyrimidine_deoxyribonucleoside_diphosphate_metabolic_process


id: GO:0009197
description: Pyrimidine deoxyribonucleoside diphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009197
golevel: 8
name:
  GOBP.STRING_v12.0_1122169_STRINGid_GO:0009197_Pyrimidine_deoxyribonucleoside_diphosphate_biosynthetic_process


id: GO:0009206
description: Purine ribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009206
golevel: 8
name:
  GOBP.STRING_v12.0_1122169_STRINGid_GO:0009206_Purine_ribonucleoside_triphosphate_biosynthetic_process


id: GO:0009208
description: Pyrimidine ribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009208
golevel: 8
name:
  GOBP.STRING_v12.0_1122169_STRINGid_GO:0009208_Pyrimidine_ribonucleoside_triphosphate_metabolic_process


id: GO:0009209
description: Pyrimidine ribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009209
golevel: 8
name:
  GOBP.STRING_v12.0_1122169_STRINGid_GO:0009209_Pyrimidine_ribonucleoside_triphosphate_biosynthetic_process


id: GO:0009211
description: Pyrimidine deoxyribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009211
golevel: 8
name:
  GOBP.STRING_v12.0_1122169_STRINGid_GO:0009211_Pyrimidine_deoxyribonucleoside_triphosphate_metabolic_process


id: GO:0009212
description: Pyrimidine deoxyribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009212
golevel: 8
name:
  GOBP.STRING_v12.0_1122169_STRINGid_GO:0009212_Pyrimidine_deoxyribonucleoside_triphosphate_biosynthetic_process


id: GO:0009213
description: Pyrimidine deoxyribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009213
golevel: 8
name:
  GOBP.STRING_v12.0_1122169_STRINGid_GO:0009213_Pyrimidine_deoxyribonucleoside_triphosphate_catabolic_process


id: GO:0009215
description: Purine deoxyribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009215
golevel: 8
name:
  GOBP.STRING_v12.0_1122169_STRINGid_GO:0009215_Purine_deoxyribonucleoside_triphosphate_metabolic_process


id: GO:0009217
description: Purine deoxyribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009217
golevel: 8
name:
  GOBP.STRING_v12.0_1122169_STRINGid_GO:0009217_Purine_deoxyribonucleoside_triphosphate_catabolic_process


id: GO:0009330
description: DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009330
golevel: 3
name:
  GOCC.STRING_v12.0_1122169_STRINGid_GO:0009330_DNA_topoisomerase_type_II_(double_strand_cut,_ATP-hydrolyzing)_complex


id: GO:0009401
description: Phosphoenolpyruvate-dependent sugar phosphotransferase system
memo: https://amigo.geneontology.org/amigo/term/GO:0009401
golevel: 5
name:
  GOBP.STRING_v12.0_1122169_STRINGid_GO:0009401_Phosphoenolpyruvate-dependent_sugar_phosphotransferase_system


id: GO:0009427
description: Bacterial-type flagellum basal body, distal rod, L ring
memo: https://amigo.geneontology.org/amigo/term/GO:0009427
golevel: 2
name:
  GOCC.STRING_v12.0_1122169_STRINGid_GO:0009427_Bacterial-type_flagellum_basal_body,_distal_rod,_L_ring


id: GO:0009428
description: Bacterial-type flagellum basal body, distal rod, P ring
memo: https://amigo.geneontology.org/amigo/term/GO:0009428
golevel: 2
name:
  GOCC.STRING_v12.0_1122169_STRINGid_GO:0009428_Bacterial-type_flagellum_basal_body,_distal_rod,_P_ring


id: GO:0009678
description: Pyrophosphate hydrolysis-driven proton transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0009678
golevel: 5
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0009678_Pyrophosphate_hydrolysis-driven_proton_transmembrane_transporter_activity


id: GO:0010420
description: 3,4-dihydroxy-5-polyprenylbenzoic acid O-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0010420
golevel: 6
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0010420_3,4-dihydroxy-5-polyprenylbenzoic_acid_O-methyltransferase_activity


id: GO:0010557
description: Positive regulation of macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010557
golevel: 7
name:
  GOBP.STRING_v12.0_1122169_STRINGid_GO:0010557_Positive_regulation_of_macromolecule_biosynthetic_process


id: GO:0010558
description: Negative regulation of macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010558
golevel: 7
name:
  GOBP.STRING_v12.0_1122169_STRINGid_GO:0010558_Negative_regulation_of_macromolecule_biosynthetic_process


id: GO:0010604
description: Positive regulation of macromolecule metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010604
golevel: 6
name:
  GOBP.STRING_v12.0_1122169_STRINGid_GO:0010604_Positive_regulation_of_macromolecule_metabolic_process


id: GO:0010605
description: Negative regulation of macromolecule metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010605
golevel: 6
name:
  GOBP.STRING_v12.0_1122169_STRINGid_GO:0010605_Negative_regulation_of_macromolecule_metabolic_process


id: GO:0015169
description: glycerol-3-phosphate transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015169
golevel: 4
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0015169_glycerol-3-phosphate_transmembrane_transporter_activity


id: GO:0015173
description: Aromatic amino acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015173
golevel: 4
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0015173_Aromatic_amino_acid_transmembrane_transporter_activity


id: GO:0015318
description: Inorganic molecular entity transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015318
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0015318_Inorganic_molecular_entity_transmembrane_transporter_activity


id: GO:0015453
description: Oxidoreduction-driven active transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015453
golevel: 5
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0015453_Oxidoreduction-driven_active_transmembrane_transporter_activity


id: GO:0015605
description: Organophosphate ester transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015605
golevel: 3
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0015605_Organophosphate_ester_transmembrane_transporter_activity


id: GO:0015932
description: Nucleobase-containing compound transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015932
golevel: 3
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0015932_Nucleobase-containing_compound_transmembrane_transporter_activity


id: GO:0015988
description: Energy coupled proton transmembrane transport, against electrochemical gradient
memo: https://amigo.geneontology.org/amigo/term/GO:0015988
golevel: 6
name:
  GOBP.STRING_v12.0_1122169_STRINGid_GO:0015988_Energy_coupled_proton_transmembrane_transport,_against_electrochemical_gradient


id: GO:0016614
description: Oxidoreductase activity, acting on CH-OH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016614
golevel: 3
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0016614_Oxidoreductase_activity,_acting_on_CH-OH_group_of_donors


id: GO:0016616
description: Oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016616
golevel: 4
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0016616_Oxidoreductase_activity,_acting_on_the_CH-OH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016620
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016620
golevel: 4
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0016620_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016624
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016624
golevel: 4
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0016624_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_disulfide_as_acceptor


id: GO:0016627
description: Oxidoreductase activity, acting on the CH-CH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016627
golevel: 3
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0016627_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors


id: GO:0016628
description: Oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016628
golevel: 4
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0016628_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016634
description: Oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016634
golevel: 4
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0016634_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_oxygen_as_acceptor


id: GO:0016635
memo: https://amigo.geneontology.org/amigo/term/GO:0016635
golevel: 4
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0016635_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_quinone_or_related_compound_as_acceptor

description:
  Oxidoreductase activity, acting on the CH-CH group of donors, quinone or related compound as acceptor


id: GO:0016638
description: Oxidoreductase activity, acting on the CH-NH2 group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016638
golevel: 3
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0016638_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors


id: GO:0016639
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016639
golevel: 4
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0016639_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016641
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016641
golevel: 4
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0016641_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_oxygen_as_acceptor


id: GO:0016642
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016642
golevel: 4
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0016642_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_disulfide_as_acceptor


id: GO:0016643
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, iron-sulfur protein as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016643
golevel: 4
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0016643_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_iron-sulfur_protein_as_acceptor


id: GO:0016645
description: Oxidoreductase activity, acting on the CH-NH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016645
golevel: 3
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0016645_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors


id: GO:0016646
description: Oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016646
golevel: 4
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0016646_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016649
memo: https://amigo.geneontology.org/amigo/term/GO:0016649
golevel: 4
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0016649_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors,_quinone_or_similar_compound_as_acceptor

description:
  Oxidoreductase activity, acting on the CH-NH group of donors, quinone or similar compound as acceptor


id: GO:0016652
description: Oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016652
golevel: 4
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0016652_Oxidoreductase_activity,_acting_on_NAD(P)H,_NAD(P)_as_acceptor


id: GO:0016653
description: Oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016653
golevel: 4
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0016653_Oxidoreductase_activity,_acting_on_NAD(P)H,_heme_protein_as_acceptor


id: GO:0016655
description: Oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016655
golevel: 4
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0016655_Oxidoreductase_activity,_acting_on_NAD(P)H,_quinone_or_similar_compound_as_acceptor


id: GO:0016657
description: Oxidoreductase activity, acting on NAD(P)H, nitrogenous group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016657
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0016657_Oxidoreductase_activity,_acting_on_NAD(P)H,_nitrogenous_group_as_acceptor


id: GO:0016661
description: Oxidoreductase activity, acting on other nitrogenous compounds as donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016661
golevel: 3
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0016661_Oxidoreductase_activity,_acting_on_other_nitrogenous_compounds_as_donors


id: GO:0016667
description: Oxidoreductase activity, acting on a sulfur group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016667
golevel: 3
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0016667_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors


id: GO:0016668
description: Oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016668
golevel: 4
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0016668_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_NAD(P)_as_acceptor


id: GO:0016671
description: Oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016671
golevel: 4
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0016671_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_disulfide_as_acceptor


id: GO:0016675
description: Oxidoreductase activity, acting on a heme group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016675
golevel: 3
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0016675_Oxidoreductase_activity,_acting_on_a_heme_group_of_donors


id: GO:0016679
description: Oxidoreductase activity, acting on diphenols and related substances as donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016679
golevel: 3
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0016679_Oxidoreductase_activity,_acting_on_diphenols_and_related_substances_as_donors


id: GO:0016682
description: Oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016682
golevel: 4
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0016682_Oxidoreductase_activity,_acting_on_diphenols_and_related_substances_as_donors,_oxygen_as_acceptor


id: GO:0016684
description: Oxidoreductase activity, acting on peroxide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016684
golevel: 3
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0016684_Oxidoreductase_activity,_acting_on_peroxide_as_acceptor


id: GO:0016701
description: Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen
memo: https://amigo.geneontology.org/amigo/term/GO:0016701
golevel: 3
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0016701_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen


id: GO:0016702
memo: https://amigo.geneontology.org/amigo/term/GO:0016702
golevel: 4
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0016702_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen,_incorporation_of_two_atoms_of_oxygen

description:
  Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen


id: GO:0016703
memo: https://amigo.geneontology.org/amigo/term/GO:0016703
golevel: 4
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0016703_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen,_incorporation_of_one_atom_of_oxygen_(internal_monooxygenases_or_internal_mixed_function_oxidases)

description:
  Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)


id: GO:0016705
memo: https://amigo.geneontology.org/amigo/term/GO:0016705
golevel: 3
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0016705_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen


id: GO:0016709
memo: https://amigo.geneontology.org/amigo/term/GO:0016709
golevel: 4
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0016709_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen,_NAD(P)H_as_one_donor,_and_incorporation_of_one_atom_of_oxygen

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen


id: GO:0016713
memo: https://amigo.geneontology.org/amigo/term/GO:0016713
golevel: 4
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0016713_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen,_reduced_iron-sulfur_protein_as_one_donor,_and_incorporation_of_one_atom_of_oxygen

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen


id: GO:0016714
memo: https://amigo.geneontology.org/amigo/term/GO:0016714
golevel: 4
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0016714_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen,_reduced_pteridine_as_one_donor,_and_incorporation_of_one_atom_of_oxygen

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced pteridine as one donor, and incorporation of one atom of oxygen


id: GO:0016717
memo: https://amigo.geneontology.org/amigo/term/GO:0016717
golevel: 4
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0016717_Oxidoreductase_activity,_acting_on_paired_donors,_with_oxidation_of_a_pair_of_donors_resulting_in_the_reduction_of_molecular_oxygen_to_two_molecules_of_water

description:
  Oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water


id: GO:0016721
description: Oxidoreductase activity, acting on superoxide radicals as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016721
golevel: 3
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0016721_Oxidoreductase_activity,_acting_on_superoxide_radicals_as_acceptor


id: GO:0016724
description: Oxidoreductase activity, acting on metal ions, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016724
golevel: 4
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0016724_Oxidoreductase_activity,_acting_on_metal_ions,_oxygen_as_acceptor


id: GO:0016726
description: Oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016726
golevel: 4
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0016726_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_NAD_or_NADP_as_acceptor


id: GO:0016728
description: Oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016728
golevel: 4
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0016728_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_disulfide_as_acceptor


id: GO:0016730
description: Oxidoreductase activity, acting on iron-sulfur proteins as donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016730
golevel: 3
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0016730_Oxidoreductase_activity,_acting_on_iron-sulfur_proteins_as_donors


id: GO:0016731
description: Oxidoreductase activity, acting on iron-sulfur proteins as donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016731
golevel: 4
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0016731_Oxidoreductase_activity,_acting_on_iron-sulfur_proteins_as_donors,_NAD_or_NADP_as_acceptor


id: GO:0016742
description: Hydroxymethyl-, formyl- and related transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0016742
golevel: 4
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0016742_Hydroxymethyl-,_formyl-_and_related_transferase_activity


id: GO:0016747
description: Acyltransferase activity, transferring groups other than amino-acyl groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016747
golevel: 4
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0016747_Acyltransferase_activity,_transferring_groups_other_than_amino-acyl_groups


id: GO:0016765
description: Transferase activity, transferring alkyl or aryl (other than methyl) groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016765
golevel: 3
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0016765_Transferase_activity,_transferring_alkyl_or_aryl_(other_than_methyl)_groups


id: GO:0016772
description: Transferase activity, transferring phosphorus-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016772
golevel: 3
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0016772_Transferase_activity,_transferring_phosphorus-containing_groups


id: GO:0016773
description: Phosphotransferase activity, alcohol group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016773
golevel: 4
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0016773_Phosphotransferase_activity,_alcohol_group_as_acceptor


id: GO:0016774
description: Phosphotransferase activity, carboxyl group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016774
golevel: 4
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0016774_Phosphotransferase_activity,_carboxyl_group_as_acceptor


id: GO:0016775
description: Phosphotransferase activity, nitrogenous group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016775
golevel: 4
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0016775_Phosphotransferase_activity,_nitrogenous_group_as_acceptor


id: GO:0016776
description: Phosphotransferase activity, phosphate group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016776
golevel: 4
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0016776_Phosphotransferase_activity,_phosphate_group_as_acceptor


id: GO:0016780
description: Phosphotransferase activity, for other substituted phosphate groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016780
golevel: 4
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0016780_Phosphotransferase_activity,_for_other_substituted_phosphate_groups


id: GO:0016782
description: Transferase activity, transferring sulphur-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016782
golevel: 3
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0016782_Transferase_activity,_transferring_sulphur-containing_groups


id: GO:0016796
memo: https://amigo.geneontology.org/amigo/term/GO:0016796
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0016796_Exonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_5-phosphomonoesters

description:
  Exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5-phosphomonoesters


id: GO:0016810
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
memo: https://amigo.geneontology.org/amigo/term/GO:0016810
golevel: 3
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0016810_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds


id: GO:0016811
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
memo: https://amigo.geneontology.org/amigo/term/GO:0016811
golevel: 4
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0016811_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_linear_amides


id: GO:0016812
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
memo: https://amigo.geneontology.org/amigo/term/GO:0016812
golevel: 4
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0016812_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_cyclic_amides


id: GO:0016813
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines
memo: https://amigo.geneontology.org/amigo/term/GO:0016813
golevel: 4
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0016813_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_linear_amidines


id: GO:0016814
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines
memo: https://amigo.geneontology.org/amigo/term/GO:0016814
golevel: 4
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0016814_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_cyclic_amidines


id: GO:0016818
description: Hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
memo: https://amigo.geneontology.org/amigo/term/GO:0016818
golevel: 4
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0016818_Hydrolase_activity,_acting_on_acid_anhydrides,_in_phosphorus-containing_anhydrides


id: GO:0016822
description: Hydrolase activity, acting on acid carbon-carbon bonds
memo: https://amigo.geneontology.org/amigo/term/GO:0016822
golevel: 3
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0016822_Hydrolase_activity,_acting_on_acid_carbon-carbon_bonds


id: GO:0016823
description: Hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances
memo: https://amigo.geneontology.org/amigo/term/GO:0016823
golevel: 4
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0016823_Hydrolase_activity,_acting_on_acid_carbon-carbon_bonds,_in_ketonic_substances


id: GO:0016837
description: Carbon-oxygen lyase activity, acting on polysaccharides
memo: https://amigo.geneontology.org/amigo/term/GO:0016837
golevel: 4
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0016837_Carbon-oxygen_lyase_activity,_acting_on_polysaccharides


id: GO:0016855
description: Racemase and epimerase activity, acting on amino acids and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0016855
golevel: 4
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0016855_Racemase_and_epimerase_activity,_acting_on_amino_acids_and_derivatives


id: GO:0016856
description: Racemase and epimerase activity, acting on hydroxy acids and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0016856
golevel: 4
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0016856_Racemase_and_epimerase_activity,_acting_on_hydroxy_acids_and_derivatives


id: GO:0016857
description: Racemase and epimerase activity, acting on carbohydrates and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0016857
golevel: 4
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0016857_Racemase_and_epimerase_activity,_acting_on_carbohydrates_and_derivatives


id: GO:0016861
description: Intramolecular oxidoreductase activity, interconverting aldoses and ketoses
memo: https://amigo.geneontology.org/amigo/term/GO:0016861
golevel: 4
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0016861_Intramolecular_oxidoreductase_activity,_interconverting_aldoses_and_ketoses


id: GO:0016863
description: Intramolecular oxidoreductase activity, transposing C=C bonds
memo: https://amigo.geneontology.org/amigo/term/GO:0016863
golevel: 4
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0016863_Intramolecular_oxidoreductase_activity,_transposing_C=C_bonds


id: GO:0016868
description: Intramolecular transferase activity, phosphotransferases
memo: https://amigo.geneontology.org/amigo/term/GO:0016868
golevel: 4
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0016868_Intramolecular_transferase_activity,_phosphotransferases


id: GO:0016869
description: Intramolecular transferase activity, transferring amino groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016869
golevel: 4
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0016869_Intramolecular_transferase_activity,_transferring_amino_groups


id: GO:0016884
description: Carbon-nitrogen ligase activity, with glutamine as amido-N-donor
memo: https://amigo.geneontology.org/amigo/term/GO:0016884
golevel: 4
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0016884_Carbon-nitrogen_ligase_activity,_with_glutamine_as_amido-N-donor


id: GO:0016888
description: Endodeoxyribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016888
golevel: 4
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0016888_Endodeoxyribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016889
description: Endodeoxyribonuclease activity, producing 3-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016889
golevel: 4
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0016889_Endodeoxyribonuclease_activity,_producing_3-phosphomonoesters


id: GO:0016891
description: Endoribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016891
golevel: 4
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0016891_Endoribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016892
description: Endoribonuclease activity, producing 3-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016892
golevel: 4
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0016892_Endoribonuclease_activity,_producing_3-phosphomonoesters


id: GO:0016893
memo: https://amigo.geneontology.org/amigo/term/GO:0016893
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0016893_Endonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_5-phosphomonoesters

description:
  Endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5-phosphomonoesters


id: GO:0016894
memo: https://amigo.geneontology.org/amigo/term/GO:0016894
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0016894_Endonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_3-phosphomonoesters

description:
  Endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3-phosphomonoesters


id: GO:0016895
description: Exodeoxyribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016895
golevel: 6
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0016895_Exodeoxyribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016896
description: Exoribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016896
golevel: 6
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0016896_Exoribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016901
memo: https://amigo.geneontology.org/amigo/term/GO:0016901
golevel: 4
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0016901_Oxidoreductase_activity,_acting_on_the_CH-OH_group_of_donors,_quinone_or_similar_compound_as_acceptor

description:
  Oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor


id: GO:0016903
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016903
golevel: 3
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0016903_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors


id: GO:0018339
description: peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid
memo: https://amigo.geneontology.org/amigo/term/GO:0018339
golevel: 8
name:
  GOBP.STRING_v12.0_1122169_STRINGid_GO:0018339_peptidyl-L-beta-methylthioaspartic_acid_biosynthetic_process_from_peptidyl-aspartic_acid


id: GO:0018478
description: Malonate-semialdehyde dehydrogenase (acetylating) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0018478
golevel: 5
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0018478_Malonate-semialdehyde_dehydrogenase_(acetylating)_activity


id: GO:0019171
description: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0019171
golevel: 5
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0019171_3-hydroxyacyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0019219
description: Regulation of nucleobase-containing compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0019219
golevel: 6
name:
  GOBP.STRING_v12.0_1122169_STRINGid_GO:0019219_Regulation_of_nucleobase-containing_compound_metabolic_process


id: GO:0019243
description: Methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione
memo: https://amigo.geneontology.org/amigo/term/GO:0019243
golevel: 7
name:
  GOBP.STRING_v12.0_1122169_STRINGid_GO:0019243_Methylglyoxal_catabolic_process_to_D-lactate_via_S-lactoyl-glutathione


id: GO:0019287
description: Isopentenyl diphosphate biosynthetic process, mevalonate pathway
memo: https://amigo.geneontology.org/amigo/term/GO:0019287
golevel: 6
name:
  GOBP.STRING_v12.0_1122169_STRINGid_GO:0019287_Isopentenyl_diphosphate_biosynthetic_process,_mevalonate_pathway


id: GO:0019293
description: Tyrosine biosynthetic process, by oxidation of phenylalanine
memo: https://amigo.geneontology.org/amigo/term/GO:0019293
golevel: 8
name:
  GOBP.STRING_v12.0_1122169_STRINGid_GO:0019293_Tyrosine_biosynthetic_process,_by_oxidation_of_phenylalanine


id: GO:0019294
description: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0019294
golevel: 6
name:
  GOBP.STRING_v12.0_1122169_STRINGid_GO:0019294_keto-3-deoxy-D-manno-octulosonic_acid_biosynthetic_process


id: GO:0019556
description: Histidine catabolic process to glutamate and formamide
memo: https://amigo.geneontology.org/amigo/term/GO:0019556
golevel: 5
name:
  GOBP.STRING_v12.0_1122169_STRINGid_GO:0019556_Histidine_catabolic_process_to_glutamate_and_formamide


id: GO:0019829
description: ATPase-coupled cation transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0019829
golevel: 3
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0019829_ATPase-coupled_cation_transmembrane_transporter_activity


id: GO:0030174
description: Regulation of DNA-templated DNA replication initiation
memo: https://amigo.geneontology.org/amigo/term/GO:0030174
golevel: 9
name:
  GOBP.STRING_v12.0_1122169_STRINGid_GO:0030174_Regulation_of_DNA-templated_DNA_replication_initiation


id: GO:0030435
description: Sporulation resulting in formation of a cellular spore
memo: https://amigo.geneontology.org/amigo/term/GO:0030435
golevel: 3
name:
  GOBP.STRING_v12.0_1122169_STRINGid_GO:0030435_Sporulation_resulting_in_formation_of_a_cellular_spore


id: GO:0030613
description: Oxidoreductase activity, acting on phosphorus or arsenic in donors
memo: https://amigo.geneontology.org/amigo/term/GO:0030613
golevel: 3
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0030613_Oxidoreductase_activity,_acting_on_phosphorus_or_arsenic_in_donors


id: GO:0030614
description: Oxidoreductase activity, acting on phosphorus or arsenic in donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0030614
golevel: 4
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0030614_Oxidoreductase_activity,_acting_on_phosphorus_or_arsenic_in_donors,_disulfide_as_acceptor


id: GO:0031233
description: Intrinsic component of external side of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031233
name:
  GOCC.STRING_v12.0_1122169_STRINGid_GO:0031233_Intrinsic_component_of_external_side_of_plasma_membrane


id: GO:0031235
description: Intrinsic component of the cytoplasmic side of the plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031235
name:
  GOCC.STRING_v12.0_1122169_STRINGid_GO:0031235_Intrinsic_component_of_the_cytoplasmic_side_of_the_plasma_membrane


id: GO:0031246
description: Intrinsic component of periplasmic side of cell outer membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031246
name:
  GOCC.STRING_v12.0_1122169_STRINGid_GO:0031246_Intrinsic_component_of_periplasmic_side_of_cell_outer_membrane


id: GO:0031554
description: Regulation of DNA-templated transcription, termination
memo: https://amigo.geneontology.org/amigo/term/GO:0031554
golevel: 6
name:
  GOBP.STRING_v12.0_1122169_STRINGid_GO:0031554_Regulation_of_DNA-templated_transcription,_termination


id: GO:0032297
description: Negative regulation of DNA-templated DNA replication initiation
memo: https://amigo.geneontology.org/amigo/term/GO:0032297
golevel: 10
name:
  GOBP.STRING_v12.0_1122169_STRINGid_GO:0032297_Negative_regulation_of_DNA-templated_DNA_replication_initiation


id: GO:0032414
description: Positive regulation of ion transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0032414
golevel: 4
name:
  GOBP.STRING_v12.0_1122169_STRINGid_GO:0032414_Positive_regulation_of_ion_transmembrane_transporter_activity


id: GO:0033177
description: Proton-transporting two-sector ATPase complex, proton-transporting domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033177
golevel: 3
name:
  GOCC.STRING_v12.0_1122169_STRINGid_GO:0033177_Proton-transporting_two-sector_ATPase_complex,_proton-transporting_domain


id: GO:0033178
description: Proton-transporting two-sector ATPase complex, catalytic domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033178
golevel: 3
name:
  GOCC.STRING_v12.0_1122169_STRINGid_GO:0033178_Proton-transporting_two-sector_ATPase_complex,_catalytic_domain


id: GO:0033283
description: ATPase-coupled organic acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033283
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0033283_ATPase-coupled_organic_acid_transmembrane_transporter_activity


id: GO:0033284
description: ATPase-coupled carboxylic acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033284
golevel: 3
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0033284_ATPase-coupled_carboxylic_acid_transmembrane_transporter_activity


id: GO:0033467
description: CMP-keto-3-deoxy-D-manno-octulosonic acid metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0033467
name:
  GOBP.STRING_v12.0_1122169_STRINGid_GO:0033467_CMP-keto-3-deoxy-D-manno-octulosonic_acid_metabolic_process


id: GO:0033468
description: CMP-keto-3-deoxy-D-manno-octulosonic acid biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0033468
golevel: 6
name:
  GOBP.STRING_v12.0_1122169_STRINGid_GO:0033468_CMP-keto-3-deoxy-D-manno-octulosonic_acid_biosynthetic_process


id: GO:0033512
description: L-lysine catabolic process to acetyl-CoA via saccharopine
memo: https://amigo.geneontology.org/amigo/term/GO:0033512
golevel: 6
name:
  GOBP.STRING_v12.0_1122169_STRINGid_GO:0033512_L-lysine_catabolic_process_to_acetyl-CoA_via_saccharopine


id: GO:0033539
description: Fatty acid beta-oxidation using acyl-CoA dehydrogenase
memo: https://amigo.geneontology.org/amigo/term/GO:0033539
golevel: 7
name:
  GOBP.STRING_v12.0_1122169_STRINGid_GO:0033539_Fatty_acid_beta-oxidation_using_acyl-CoA_dehydrogenase


id: GO:0033744
description: L-methionine:thioredoxin-disulfide S-oxidoreductase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033744
golevel: 5
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0033744_L-methionine:thioredoxin-disulfide_S-oxidoreductase_activity


id: GO:0033818
description: Beta-ketoacyl-acyl-carrier-protein synthase III activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033818
golevel: 5
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0033818_Beta-ketoacyl-acyl-carrier-protein_synthase_III_activity


id: GO:0034023
description: 5-(carboxyamino)imidazole ribonucleotide mutase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0034023
golevel: 4
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0034023_5-(carboxyamino)imidazole_ribonucleotide_mutase_activity


id: GO:0034036
description: Purine ribonucleoside bisphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034036
golevel: 6
name:
  GOBP.STRING_v12.0_1122169_STRINGid_GO:0034036_Purine_ribonucleoside_bisphosphate_biosynthetic_process


id: GO:0034040
description: ATPase-coupled lipid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0034040
golevel: 3
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0034040_ATPase-coupled_lipid_transmembrane_transporter_activity


id: GO:0034249
description: Negative regulation of cellular amide metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034249
golevel: 6
name:
  GOBP.STRING_v12.0_1122169_STRINGid_GO:0034249_Negative_regulation_of_cellular_amide_metabolic_process


id: GO:0034250
description: Positive regulation of cellular amide metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034250
golevel: 6
name:
  GOBP.STRING_v12.0_1122169_STRINGid_GO:0034250_Positive_regulation_of_cellular_amide_metabolic_process


id: GO:0034404
description: Nucleobase-containing small molecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034404
golevel: 5
name:
  GOBP.STRING_v12.0_1122169_STRINGid_GO:0034404_Nucleobase-containing_small_molecule_biosynthetic_process


id: GO:0034656
description: Nucleobase-containing small molecule catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034656
golevel: 5
name:
  GOBP.STRING_v12.0_1122169_STRINGid_GO:0034656_Nucleobase-containing_small_molecule_catabolic_process


id: GO:0035592
description: Establishment of protein localization to extracellular region
memo: https://amigo.geneontology.org/amigo/term/GO:0035592
golevel: 4
name:
  GOBP.STRING_v12.0_1122169_STRINGid_GO:0035592_Establishment_of_protein_localization_to_extracellular_region


id: GO:0035998
description: 7,8-dihydroneopterin 3-triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0035998
name:
  GOBP.STRING_v12.0_1122169_STRINGid_GO:0035998_7,8-dihydroneopterin_3-triphosphate_biosynthetic_process


id: GO:0036107
description: 4-amino-4-deoxy-alpha-L-arabinopyranosyl undecaprenyl phosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0036107
name:
  GOBP.STRING_v12.0_1122169_STRINGid_GO:0036107_4-amino-4-deoxy-alpha-L-arabinopyranosyl_undecaprenyl_phosphate_metabolic_process


id: GO:0036108
description: 4-amino-4-deoxy-alpha-L-arabinopyranosyl undecaprenyl phosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0036108
golevel: 6
name:
  GOBP.STRING_v12.0_1122169_STRINGid_GO:0036108_4-amino-4-deoxy-alpha-L-arabinopyranosyl_undecaprenyl_phosphate_biosynthetic_process


id: GO:0036307
description: 23S rRNA (adenine(2030)-N(6))-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0036307
golevel: 7
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0036307_23S_rRNA_(adenine(2030)-N(6))-methyltransferase_activity


id: GO:0036361
description: Racemase activity, acting on amino acids and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0036361
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0036361_Racemase_activity,_acting_on_amino_acids_and_derivatives


id: GO:0042083
description: 5,10-methylenetetrahydrofolate-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0042083
golevel: 5
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0042083_5,10-methylenetetrahydrofolate-dependent_methyltransferase_activity


id: GO:0042173
description: Regulation of sporulation resulting in formation of a cellular spore
memo: https://amigo.geneontology.org/amigo/term/GO:0042173
golevel: 5
name:
  GOBP.STRING_v12.0_1122169_STRINGid_GO:0042173_Regulation_of_sporulation_resulting_in_formation_of_a_cellular_spore


id: GO:0042777
description: Proton motive force-driven plasma membrane ATP synthesis
memo: https://amigo.geneontology.org/amigo/term/GO:0042777
golevel: 9
name:
  GOBP.STRING_v12.0_1122169_STRINGid_GO:0042777_Proton_motive_force-driven_plasma_membrane_ATP_synthesis


id: GO:0043165
description: Gram-negative-bacterium-type cell outer membrane assembly
memo: https://amigo.geneontology.org/amigo/term/GO:0043165
golevel: 6
name:
  GOBP.STRING_v12.0_1122169_STRINGid_GO:0043165_Gram-negative-bacterium-type_cell_outer_membrane_assembly


id: GO:0043333
description: 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0043333
name:
  GOMF.STRING_v12.0_1122169_STRINGid_GO:0043333_2-octaprenyl-6-methoxy-1,4-benzoquinone_methylase_activity


id: GO:0043467
description: Regulation of generation of precursor metabolites and energy
memo: https://amigo.geneontology.org/amigo/term/GO:0043467
golevel: 5
name:
  GOBP.STRING_v12.0_1122169_STRINGid_GO:0043467_Regulation_of_generation_of_precursor_metabolites_and_energy


