# geneInfo

ensembl_gene_id: SAMN05421781_0008
symbol: SDX01503.1
gene_biotype: protein_coding
description:
  tRNA-binding protein; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.


ensembl_gene_id: SAMN05421781_0033
symbol: SDX02473.1
gene_biotype: protein_coding
description:
  Plasmid rolling circle replication initiator protein REP and truncated derivatives; Manually curated.


ensembl_gene_id: SAMN05421781_0038
symbol: SDX02735.1
gene_biotype: protein_coding
description:
  Malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase; Manually curated.


ensembl_gene_id: SAMN05421781_0046
symbol: map
gene_biotype: protein_coding
description:
  Methionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.


ensembl_gene_id: SAMN05421781_0051
symbol: SDW00224.1
gene_biotype: protein_coding
description:
  Multidrug efflux pump subunit AcrB; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: SAMN05421781_0070
symbol: SDW00492.1
gene_biotype: protein_coding
description:
  NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: SAMN05421781_0084
symbol: SDW00739.1
gene_biotype: protein_coding
description:
  MFS transporter, SP family, xylose:H+ symportor; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.


ensembl_gene_id: SAMN05421781_0107
symbol: SDW01215.1
gene_biotype: protein_coding
description:
  Regulator of ribonuclease activity A; Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions.


ensembl_gene_id: SAMN05421781_0108
symbol: dapH
gene_biotype: protein_coding
description:
  2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase; Catalyzes the transfer of an acetyl group from acetyl-CoA to tetrahydrodipicolinate.


ensembl_gene_id: SAMN05421781_0109
symbol: SDW01271.1
gene_biotype: protein_coding
description:
  Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: SAMN05421781_0110
symbol: SDW01309.1
gene_biotype: protein_coding
description:
  N-acetyldiaminopimelate deacetylase; Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate.


ensembl_gene_id: SAMN05421781_0117
symbol: murG
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine-N- acetylmuramylpentapeptide N-acetylglucosamine transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.


ensembl_gene_id: SAMN05421781_0119
symbol: rnj
gene_biotype: protein_coding
description:
  RNase J1; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay; Belongs to the metallo-beta-lactamase superfamily. RNA- metabolizing metallo-beta-lactamase-like family. Bacterial RNase J subfamily.


ensembl_gene_id: SAMN05421781_0121
symbol: def
gene_biotype: protein_coding
description:
  Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.


ensembl_gene_id: SAMN05421781_0123
symbol: pdhA
gene_biotype: protein_coding
description:
  Pyruvate dehydrogenase E1 component alpha subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3).


ensembl_gene_id: SAMN05421781_0142
symbol: SDW02043.1
gene_biotype: protein_coding
description:
  Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.


ensembl_gene_id: SAMN05421781_0149
symbol: SDW02187.1
gene_biotype: protein_coding
description:
  Cell fate regulator YlbF, YheA/YmcA/DUF963 family (controls sporulation, competence, biofilm development); Belongs to the UPF0342 family.


ensembl_gene_id: SAMN05421781_0156
symbol: proC
gene_biotype: protein_coding
description:
  Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.


ensembl_gene_id: SAMN05421781_0157
symbol: proA
gene_biotype: protein_coding
description:
  Glutamate-5-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.


ensembl_gene_id: SAMN05421781_0158
symbol: proB
gene_biotype: protein_coding
description:
  Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.


ensembl_gene_id: SAMN05421781_0164
symbol: coaD
gene_biotype: protein_coding
description:
  Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.


ensembl_gene_id: SAMN05421781_0166
symbol: tmcAL
gene_biotype: protein_coding
description:
  Predicted nucleotidyltransferase; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of elongator tRNA(Met), using acetate and ATP as substrates. First activates an acetate ion to form acetyladenylate (Ac- AMP) and then transfers the acetyl group to tRNA to form ac(4)C34.


ensembl_gene_id: SAMN05421781_0171
symbol: bshC
gene_biotype: protein_coding
description:
  Bacillithiol biosynthesis cysteine-adding enzyme BshC; Involved in bacillithiol (BSH) biosynthesis. May catalyze the last step of the pathway, the addition of cysteine to glucosamine malate (GlcN-Mal) to generate BSH.


ensembl_gene_id: SAMN05421781_0173
symbol: rsmH
gene_biotype: protein_coding
description:
  16S rRNA (cytosine1402-N4)-methyltransferase; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.


ensembl_gene_id: SAMN05421781_0176
symbol: murE
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily.


ensembl_gene_id: SAMN05421781_0177
symbol: mraY
gene_biotype: protein_coding
description:
  Phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.


ensembl_gene_id: SAMN05421781_0178
symbol: murD
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.


ensembl_gene_id: SAMN05421781_0180
symbol: divIB
gene_biotype: protein_coding
description:
  Cell division protein FtsQ; Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex; Belongs to the FtsQ/DivIB family. DivIB subfamily.


ensembl_gene_id: SAMN05421781_0181
symbol: ftsA
gene_biotype: protein_coding
description:
  Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.


ensembl_gene_id: SAMN05421781_0182
symbol: ftsZ
gene_biotype: protein_coding
description:
  Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.


ensembl_gene_id: SAMN05421781_0184
symbol: SDW02951.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.


ensembl_gene_id: SAMN05421781_0185
symbol: sepF
gene_biotype: protein_coding
description:
  Cell division inhibitor SepF; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA.


ensembl_gene_id: SAMN05421781_0189
symbol: ileS
gene_biotype: protein_coding
description:
  Isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily.


ensembl_gene_id: SAMN05421781_0190
symbol: lspA
gene_biotype: protein_coding
description:
  Signal peptidase II Aspartic peptidase. MEROPS family A08; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.


ensembl_gene_id: SAMN05421781_0191
symbol: SDW03113.1
gene_biotype: protein_coding
description:
  Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: SAMN05421781_0192
symbol: pyrR
gene_biotype: protein_coding
description:
  Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant; Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrR subfamily.


ensembl_gene_id: SAMN05421781_0194
symbol: pyrB
gene_biotype: protein_coding
description:
  Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.


ensembl_gene_id: SAMN05421781_0195
symbol: pyrC
gene_biotype: protein_coding
description:
  Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.


ensembl_gene_id: SAMN05421781_0198
symbol: pyrK
gene_biotype: protein_coding
description:
  Dihydroorotate oxidase B, electron transfer subunit; Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD(+).


ensembl_gene_id: SAMN05421781_0200
symbol: pyrF
gene_biotype: protein_coding
description:
  Orotidine-5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily.


ensembl_gene_id: SAMN05421781_0201
symbol: pyrE
gene_biotype: protein_coding
description:
  Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).


ensembl_gene_id: SAMN05421781_0202
symbol: SDW03390.1
gene_biotype: protein_coding
description:
  Predicted component of the ribosome quality control (RQC) complex, YloA/Tae2 family, contains fibronectin-binding (FbpA) and DUF814 domains.


ensembl_gene_id: SAMN05421781_0205
symbol: rpoZ
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.


ensembl_gene_id: SAMN05421781_0206
symbol: SDW03484.1
gene_biotype: protein_coding
description:
  Phosphopantothenate-cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.


ensembl_gene_id: SAMN05421781_0207
symbol: priA
gene_biotype: protein_coding
description:
  Replication restart DNA helicase PriA; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.


ensembl_gene_id: SAMN05421781_0208
symbol: fmt
gene_biotype: protein_coding
description:
  methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.


ensembl_gene_id: SAMN05421781_0209
symbol: SDW03557.1
gene_biotype: protein_coding
description:
  16S rRNA (cytosine967-C5)-methyltransferase; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.


ensembl_gene_id: SAMN05421781_0210
symbol: rlmN
gene_biotype: protein_coding
description:
  23S rRNA m(2)A-2503 methyltransferase; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family.


ensembl_gene_id: SAMN05421781_0213
symbol: rsgA
gene_biotype: protein_coding
description:
  Ribosome biogenesis GTPase; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.


ensembl_gene_id: SAMN05421781_0218
symbol: recG
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.


ensembl_gene_id: SAMN05421781_0219
symbol: fapR
gene_biotype: protein_coding
description:
  Acyl-coenzyme A thioesterase PaaI, contains HGG motif; Transcriptional factor involved in regulation of membrane lipid biosynthesis by repressing genes involved in fatty acid and phospholipid metabolism.


ensembl_gene_id: SAMN05421781_0220
symbol: plsX
gene_biotype: protein_coding
description:
  Phosphate:acyl-[acyl carrier protein] acyltransferase; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.


ensembl_gene_id: SAMN05421781_0222
symbol: SDW03906.1
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: SAMN05421781_0224
symbol: rnc
gene_biotype: protein_coding
description:
  RNAse III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.


ensembl_gene_id: SAMN05421781_0226
symbol: smc
gene_biotype: protein_coding
description:
  Condensin subunit Smc; Required for chromosome condensation and partitioning. Belongs to the SMC family.


ensembl_gene_id: SAMN05421781_0227
symbol: ftsY
gene_biotype: protein_coding
description:
  Fused signal recognition particle receptor; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC).


ensembl_gene_id: SAMN05421781_0228
symbol: SDW04049.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a regulatory protein.


ensembl_gene_id: SAMN05421781_0229
symbol: ffh
gene_biotype: protein_coding
description:
  Signal recognition particle subunit FFH/SRP54 (srp54); Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily.


ensembl_gene_id: SAMN05421781_0233
symbol: rimM
gene_biotype: protein_coding
description:
  16S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.


ensembl_gene_id: SAMN05421781_0234
symbol: trmD
gene_biotype: protein_coding
description:
  tRNA (Guanine37-N(1)-) methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.


ensembl_gene_id: SAMN05421781_0235
symbol: rplS
gene_biotype: protein_coding
description:
  LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.


ensembl_gene_id: SAMN05421781_0237
symbol: SDW04270.1
gene_biotype: protein_coding
description:
  Ras superfamily GTP-binding protein YlqF; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.


ensembl_gene_id: SAMN05421781_0240
symbol: sucC
gene_biotype: protein_coding
description:
  succinyl-CoA synthetase (ADP-forming) beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.


ensembl_gene_id: SAMN05421781_0241
symbol: sucD
gene_biotype: protein_coding
description:
  succinyl-CoA synthetase (ADP-forming) alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.


ensembl_gene_id: SAMN05421781_0243
symbol: topA
gene_biotype: protein_coding
description:
  DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]


ensembl_gene_id: SAMN05421781_0244
symbol: trmFO
gene_biotype: protein_coding
description:
  methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase; Catalyzes the folate-dependent formation of 5-methyl-uridine at position 54 (M-5-U54) in all tRNAs; Belongs to the MnmG family. TrmFO subfamily.


ensembl_gene_id: SAMN05421781_0245
symbol: xerC
gene_biotype: protein_coding
description:
  Tyrosine recombinase XerC subunit; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.


ensembl_gene_id: SAMN05421781_0246
symbol: hslV
gene_biotype: protein_coding
description:
  ATP dependent peptidase CodWX, CodW component. Threonine peptidase. MEROPS family T01B; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery.


ensembl_gene_id: SAMN05421781_0247
symbol: hslU
gene_biotype: protein_coding
description:
  ATP-dependent HslUV protease ATP-binding subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis.


ensembl_gene_id: SAMN05421781_0248
symbol: codY
gene_biotype: protein_coding
description:
  Transcriptional pleiotropic repressor; DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor; Belongs to the CodY family.


ensembl_gene_id: SAMN05421781_0250
symbol: tsf
gene_biotype: protein_coding
description:
  Translation elongation factor Ts (EF-Ts); Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.


ensembl_gene_id: SAMN05421781_0252
symbol: frr
gene_biotype: protein_coding
description:
  Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.


ensembl_gene_id: SAMN05421781_0253
symbol: SDW04682.1
gene_biotype: protein_coding
description:
  Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.


ensembl_gene_id: SAMN05421781_0255
symbol: dxr
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family.


ensembl_gene_id: SAMN05421781_0257
symbol: proS
gene_biotype: protein_coding
description:
  prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves dea [...]


ensembl_gene_id: SAMN05421781_0258
symbol: polC
gene_biotype: protein_coding
description:
  DNA polymerase III catalytic subunit, PolC type; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: SAMN05421781_0259
symbol: rimP
gene_biotype: protein_coding
description:
  Ribosome maturation factor RimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.


ensembl_gene_id: SAMN05421781_0263
symbol: infB
gene_biotype: protein_coding
description:
  Bacterial translation initiation factor 2 (bIF-2); One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.


ensembl_gene_id: SAMN05421781_0265
symbol: rbfA
gene_biotype: protein_coding
description:
  Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.


ensembl_gene_id: SAMN05421781_0266
symbol: truB
gene_biotype: protein_coding
description:
  tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.


ensembl_gene_id: SAMN05421781_0268
symbol: rpsO
gene_biotype: protein_coding
description:
  SSU ribosomal protein S15P; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.


ensembl_gene_id: SAMN05421781_0269
symbol: pnp
gene_biotype: protein_coding
description:
  Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.


ensembl_gene_id: SAMN05421781_0271
symbol: asd
gene_biotype: protein_coding
description:
  Aspartate semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.


ensembl_gene_id: SAMN05421781_0273
symbol: dapA
gene_biotype: protein_coding
description:
  Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).


ensembl_gene_id: SAMN05421781_0274
symbol: rnj-2
gene_biotype: protein_coding
description:
  Ribonuclease J; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay; Belongs to the metallo-beta-lactamase superfamily. RNA- metabolizing metallo-beta-lactamase-like family. Bacterial RNase J subfamily.


ensembl_gene_id: SAMN05421781_0281
symbol: SDW05413.1
gene_biotype: protein_coding
description:
  CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: SAMN05421781_0284
symbol: recA
gene_biotype: protein_coding
description:
  RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.


ensembl_gene_id: SAMN05421781_0289
symbol: miaB
gene_biotype: protein_coding
description:
  tRNA-i(6)A37 thiotransferase enzyme MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.


ensembl_gene_id: SAMN05421781_0290
symbol: SDW05668.1
gene_biotype: protein_coding
description:
  Cell fate regulator YmcA, YheA/YmcA/DUF963 family (controls sporulation, competence, biofilm development); Belongs to the UPF0342 family.


ensembl_gene_id: SAMN05421781_0291
symbol: mutS
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.


ensembl_gene_id: SAMN05421781_0292
symbol: mutL
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.


ensembl_gene_id: SAMN05421781_0294
symbol: miaA
gene_biotype: protein_coding
description:
  tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.


ensembl_gene_id: SAMN05421781_0295
symbol: hfq
gene_biotype: protein_coding
description:
  RNA-binding protein Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family.


ensembl_gene_id: SAMN05421781_0302
symbol: SDW06015.1
gene_biotype: protein_coding
description:
  DNA (cytosine-5)-methyltransferase 1; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.


ensembl_gene_id: SAMN05421781_0312
symbol: SDW06276.1
gene_biotype: protein_coding
description:
  ATP-dependent helicase/nuclease subunit A; ATP-dependent DNA helicase; Belongs to the helicase family. UvrD subfamily.


ensembl_gene_id: SAMN05421781_0336
symbol: SDW06977.1
gene_biotype: protein_coding
description:
  Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase.


ensembl_gene_id: SAMN05421781_0363
symbol: bioB
gene_biotype: protein_coding
description:
  Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.


ensembl_gene_id: SAMN05421781_0374
symbol: SDW08040.1
gene_biotype: protein_coding
description:
  PTS system D-mannitol-specific IIB component, Fru family /PTS system D-mannitol-specific IIC component, Fru family.


ensembl_gene_id: SAMN05421781_0376
symbol: SDW08101.1
gene_biotype: protein_coding
description:
  PTS system sucrose-specific IIB component, Glc family /PTS system sucrose-specific IIC component, Glc family.


ensembl_gene_id: SAMN05421781_0377
symbol: SDW08138.1
gene_biotype: protein_coding
description:
  Beta-fructofuranosidase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.


ensembl_gene_id: SAMN05421781_0396
symbol: SDW08656.1
gene_biotype: protein_coding
description:
  GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex.


ensembl_gene_id: SAMN05421781_0411
symbol: msrA
gene_biotype: protein_coding
description:
  Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.


ensembl_gene_id: SAMN05421781_0426
symbol: SDW09517.1
gene_biotype: protein_coding
description:
  PTS system D-mannose-specific IIA component, Fru family /PTS system D-mannose-specific IIB component, Fru family /PTS system D-mannose-specific IIC component, Fru family.


ensembl_gene_id: SAMN05421781_0435
symbol: azoR
gene_biotype: protein_coding
description:
  FMN-dependent NADH-azoreductase; Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family.


ensembl_gene_id: SAMN05421781_0491
symbol: SDW11408.1
gene_biotype: protein_coding
description:
  Zinc transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family.


ensembl_gene_id: SAMN05421781_0500
symbol: hflX
gene_biotype: protein_coding
description:
  GTP-binding protein HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.


ensembl_gene_id: SAMN05421781_0559
symbol: lexA
gene_biotype: protein_coding
description:
  Repressor LexA; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair.


ensembl_gene_id: SAMN05421781_0563
symbol: SDW13534.1
gene_biotype: protein_coding
description:
  Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.


ensembl_gene_id: SAMN05421781_0573
symbol: nadE
gene_biotype: protein_coding
description:
  NH(3)-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source; Belongs to the NAD synthetase family.


ensembl_gene_id: SAMN05421781_0574
symbol: metAA
gene_biotype: protein_coding
description:
  Homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family.


ensembl_gene_id: SAMN05421781_0586
symbol: SDW14140.1
gene_biotype: protein_coding
description:
  DivIVA domain-containing protein; Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation.


ensembl_gene_id: SAMN05421781_0591
symbol: SDW14254.1
gene_biotype: protein_coding
description:
  Carboxypeptidase Taq; Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues.


ensembl_gene_id: SAMN05421781_0595
symbol: parE
gene_biotype: protein_coding
description:
  DNA topoisomerase IV subunit B; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 2 subfamily.


ensembl_gene_id: SAMN05421781_0596
symbol: parC
gene_biotype: protein_coding
description:
  Topoisomerase-4 subunit A; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase GyrA/ParC subunit family. ParC type 2 subfamily.


ensembl_gene_id: SAMN05421781_0609
symbol: SDW14770.1
gene_biotype: protein_coding
description:
  Concentrative nucleoside transporter, CNT family; Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family.


ensembl_gene_id: SAMN05421781_0620
symbol: sbcD
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease I subunit D; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family.


ensembl_gene_id: SAMN05421781_0622
symbol: addB
gene_biotype: protein_coding
description:
  DNA helicase/exodeoxyribonuclease V, subunit B; ATP-dependent DNA helicase; Belongs to the helicase family. AddB/RexB type 1 subfamily.


ensembl_gene_id: SAMN05421781_0624
symbol: SDW15171.1
gene_biotype: protein_coding
description:
  2-oxoglutarate dehydrogenase E2 component; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2).


ensembl_gene_id: SAMN05421781_0625
symbol: odhA
gene_biotype: protein_coding
description:
  2-oxoglutarate dehydrogenase E1 component; E1 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the decarboxylation of 2-oxoglutarate, the first step in the conversion of 2-oxoglutarate to succinyl-CoA and CO(2).


ensembl_gene_id: SAMN05421781_0633
symbol: dapA-2
gene_biotype: protein_coding
description:
  4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).


ensembl_gene_id: SAMN05421781_0634
symbol: SDW15453.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.


ensembl_gene_id: SAMN05421781_0648
symbol: SDW15816.1
gene_biotype: protein_coding
description:
  Uncharacterized conserved protein YaaN involved in tellurite resistance; Belongs to the TelA family.


ensembl_gene_id: SAMN05421781_0660
symbol: ilvA
gene_biotype: protein_coding
description:
  L-threonine ammonia-lyase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA.


ensembl_gene_id: SAMN05421781_0666
symbol: recU
gene_biotype: protein_coding
description:
  Recombination protein U; Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation; Belongs to the RecU family.


ensembl_gene_id: SAMN05421781_0670
symbol: nth
gene_biotype: protein_coding
description:
  DNA-(apurinic or apyrimidinic site) lyase; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.


ensembl_gene_id: SAMN05421781_0676
symbol: mtaD
gene_biotype: protein_coding
description:
  5-methylthioadenosine/S-adenosylhomocysteine deaminase; Catalyzes the deamination of 5-methylthioadenosine and S- adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine. Belongs to the metallo-dependent hydrolases superfamily. MTA/SAH deaminase family.


ensembl_gene_id: SAMN05421781_0678
symbol: birA
gene_biotype: protein_coding
description:
  Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.


ensembl_gene_id: SAMN05421781_0683
symbol: dapB
gene_biotype: protein_coding
description:
  Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.


ensembl_gene_id: SAMN05421781_0690
symbol: hisC
gene_biotype: protein_coding
description:
  Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.


ensembl_gene_id: SAMN05421781_0691
symbol: trpA
gene_biotype: protein_coding
description:
  Tryptophan synthase, alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.


ensembl_gene_id: SAMN05421781_0692
symbol: trpB
gene_biotype: protein_coding
description:
  Tryptophan synthase, beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.


ensembl_gene_id: SAMN05421781_0695
symbol: trpD
gene_biotype: protein_coding
description:
  Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).


ensembl_gene_id: SAMN05421781_0696
symbol: trpE
gene_biotype: protein_coding
description:
  Anthranilate synthase, component I; Part of a heterotetrameric complex that catalyzes the two- step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine-binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concent [...]


ensembl_gene_id: SAMN05421781_0697
symbol: SDW17015.1
gene_biotype: protein_coding
description:
  Chorismate mutase; Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis.


ensembl_gene_id: SAMN05421781_0698
symbol: aroB
gene_biotype: protein_coding
description:
  3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).


ensembl_gene_id: SAMN05421781_0699
symbol: aroC
gene_biotype: protein_coding
description:
  Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.


ensembl_gene_id: SAMN05421781_0702
symbol: ndk
gene_biotype: protein_coding
description:
  Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.


ensembl_gene_id: SAMN05421781_0704
symbol: mqnA
gene_biotype: protein_coding
description:
  Futalosine synthase; Catalyzes the dehydration of chorismate into 3-[(1- carboxyvinyl)oxy]benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2).


ensembl_gene_id: SAMN05421781_0706
symbol: menG
gene_biotype: protein_coding
description:
  2-octaprenyl-6-methoxy-1,4-benzoquinone methylase /demethylmenaquinone methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2).


ensembl_gene_id: SAMN05421781_0710
symbol: gpsA
gene_biotype: protein_coding
description:
  Glycerol 3-phosphate dehydrogenase (NAD(P)+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: SAMN05421781_0711
symbol: plsY
gene_biotype: protein_coding
description:
  Acyl-phosphate glycerol-3-phosphate acyltransferase; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.


ensembl_gene_id: SAMN05421781_0712
symbol: der
gene_biotype: protein_coding
description:
  GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.


ensembl_gene_id: SAMN05421781_0713
symbol: fni
gene_biotype: protein_coding
description:
  Isopentenyl-diphosphate delta-isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).


ensembl_gene_id: SAMN05421781_0729
symbol: ppa
gene_biotype: protein_coding
description:
  Inorganic pyrophosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.


ensembl_gene_id: SAMN05421781_0730
symbol: SDW17823.1
gene_biotype: protein_coding
description:
  D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: SAMN05421781_0735
symbol: SDW17939.1
gene_biotype: protein_coding
description:
  Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: SAMN05421781_0740
symbol: SDW18053.1
gene_biotype: protein_coding
description:
  Ribosomal large subunit pseudouridine synthase B; Belongs to the pseudouridine synthase RsuA family.


ensembl_gene_id: SAMN05421781_0742
symbol: scpB
gene_biotype: protein_coding
description:
  Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: SAMN05421781_0743
symbol: scpA
gene_biotype: protein_coding
description:
  Condensin subunit ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: SAMN05421781_0746
symbol: ribH
gene_biotype: protein_coding
description:
  6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin; Belongs to the DMRL synthase family.


ensembl_gene_id: SAMN05421781_0747
symbol: ribBA
gene_biotype: protein_coding
description:
  GTP cyclohydrolase II /3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.


ensembl_gene_id: SAMN05421781_0749
symbol: SDW18276.1
gene_biotype: protein_coding
description:
  Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.


ensembl_gene_id: SAMN05421781_0750
symbol: SDW18301.1
gene_biotype: protein_coding
description:
  Peptidyl-prolyl cis-trans isomerase B (cyclophilin B); PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.


ensembl_gene_id: SAMN05421781_0751
symbol: lysA
gene_biotype: protein_coding
description:
  Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.


ensembl_gene_id: SAMN05421781_0753
symbol: SDW18366.1
gene_biotype: protein_coding
description:
  Purine-nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.


ensembl_gene_id: SAMN05421781_0755
symbol: deoB
gene_biotype: protein_coding
description:
  Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family.


ensembl_gene_id: SAMN05421781_0756
symbol: xerD
gene_biotype: protein_coding
description:
  Tyrosine recombinase XerD subunit; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.


ensembl_gene_id: SAMN05421781_0759
symbol: uppP
gene_biotype: protein_coding
description:
  Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.


ensembl_gene_id: SAMN05421781_0789
symbol: SDW19261.1
gene_biotype: protein_coding
description:
  3-Cys thioredoxin peroxidase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.


ensembl_gene_id: SAMN05421781_0802
symbol: SDW19539.1
gene_biotype: protein_coding
description:
  Lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.


ensembl_gene_id: SAMN05421781_0823
symbol: SDW20080.1
gene_biotype: protein_coding
description:
  Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA).


ensembl_gene_id: SAMN05421781_0828
symbol: msrA-2
gene_biotype: protein_coding
description:
  Peptide methionine sulfoxide reductase msrA/msrB; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.


ensembl_gene_id: SAMN05421781_0848
symbol: SDW21048.1
gene_biotype: protein_coding
description:
  MFS transporter, SP family, arabinose:H+ symporter; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.


ensembl_gene_id: SAMN05421781_0889
symbol: SDW22164.1
gene_biotype: protein_coding
description:
  Protein-tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.


ensembl_gene_id: SAMN05421781_0903
symbol: SDW22569.1
gene_biotype: protein_coding
description:
  Two-component system, response regulator, stage 0 sporulation protein A; May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process.


ensembl_gene_id: SAMN05421781_0904
symbol: SDW22612.1
gene_biotype: protein_coding
description:
  DNA repair protein RecN (Recombination protein N); May be involved in recombinational repair of damaged DNA.


ensembl_gene_id: SAMN05421781_0907
symbol: dxs
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.


ensembl_gene_id: SAMN05421781_0910
symbol: xseB
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.


ensembl_gene_id: SAMN05421781_0911
symbol: xseA
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.


ensembl_gene_id: SAMN05421781_0912
symbol: folD
gene_biotype: protein_coding
description:
  Methylenetetrahydrofolate dehydrogenase (NADP+); Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.


ensembl_gene_id: SAMN05421781_0913
symbol: nusB
gene_biotype: protein_coding
description:
  NusB antitermination factor; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.


ensembl_gene_id: SAMN05421781_0916
symbol: efp
gene_biotype: protein_coding
description:
  Translation elongation factor P (EF-P); Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.


ensembl_gene_id: SAMN05421781_0919
symbol: mntR
gene_biotype: protein_coding
description:
  Iron (metal) dependent repressor, DtxR family; Central regulator of manganese homeostasis. Belongs to the DtxR/MntR family.


ensembl_gene_id: SAMN05421781_0920
symbol: SDW23103.1
gene_biotype: protein_coding
description:
  D-alanine transaminase; Acts on the D-isomers of alanine, leucine, aspartate, glutamate, aminobutyrate, norvaline and asparagine. The enzyme transfers an amino group from a substrate D-amino acid to the pyridoxal phosphate cofactor to form pyridoxamine and an alpha-keto acid in the first half-reaction.


ensembl_gene_id: SAMN05421781_0921
symbol: lipM
gene_biotype: protein_coding
description:
  Lipoate-protein ligase A; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domain of GcvH, an intermediate carrier during protein lipoylation.


ensembl_gene_id: SAMN05421781_0923
symbol: gcvPB
gene_biotype: protein_coding
description:
  Glycine dehydrogenase (decarboxylating) beta subunit; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. C-terminal subunit subfamily.


ensembl_gene_id: SAMN05421781_0924
symbol: gcvPA
gene_biotype: protein_coding
description:
  Glycine dehydrogenase (decarboxylating) alpha subunit; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein.


ensembl_gene_id: SAMN05421781_0933
symbol: cynS
gene_biotype: protein_coding
description:
  Cyanate lyase; Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide; Belongs to the cyanase family.


ensembl_gene_id: SAMN05421781_0938
symbol: cysI
gene_biotype: protein_coding
description:
  Sulfite reductase (NADPH) beta subunit; Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L-cysteine from sulfate. Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.


ensembl_gene_id: SAMN05421781_0939
symbol: SDW23723.1
gene_biotype: protein_coding
description:
  Sulfite reductase (NADPH) alpha subunit; Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L-cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH -> FAD -> FMN to the hemoprotein component.


ensembl_gene_id: SAMN05421781_0958
symbol: SDW24405.1
gene_biotype: protein_coding
description:
  Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.


ensembl_gene_id: SAMN05421781_0968
symbol: ispG
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family.


ensembl_gene_id: SAMN05421781_0974
symbol: ppk
gene_biotype: protein_coding
description:
  Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.


ensembl_gene_id: SAMN05421781_0975
symbol: nfo
gene_biotype: protein_coding
description:
  Endonuclease IV; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin.


ensembl_gene_id: SAMN05421781_0977
symbol: ispH
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.


ensembl_gene_id: SAMN05421781_0978
symbol: SDW24902.1
gene_biotype: protein_coding
description:
  Dinuclear metal center protein, YbgI/SA1388 family; Belongs to the GTP cyclohydrolase I type 2/NIF3 family.


ensembl_gene_id: SAMN05421781_0980
symbol: sigA
gene_biotype: protein_coding
description:
  RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.


ensembl_gene_id: SAMN05421781_0981
symbol: dnaG
gene_biotype: protein_coding
description:
  DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.


ensembl_gene_id: SAMN05421781_0983
symbol: SDW25035.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation/dephosphorylation.


ensembl_gene_id: SAMN05421781_0988
symbol: era
gene_biotype: protein_coding
description:
  GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.


ensembl_gene_id: SAMN05421781_0989
symbol: SDW25195.1
gene_biotype: protein_coding
description:
  Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: SAMN05421781_0991
symbol: ybeY
gene_biotype: protein_coding
description:
  Probable rRNA maturation factor; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.


ensembl_gene_id: SAMN05421781_0998
symbol: deoC
gene_biotype: protein_coding
description:
  Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.


ensembl_gene_id: SAMN05421781_1000
symbol: SDW25576.1
gene_biotype: protein_coding
description:
  16S rRNA (uracil1498-N3)-methyltransferase; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.


ensembl_gene_id: SAMN05421781_1001
symbol: prmA
gene_biotype: protein_coding
description:
  Ribosomal protein L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family.


ensembl_gene_id: SAMN05421781_1002
symbol: dnaJ
gene_biotype: protein_coding
description:
  Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...]


ensembl_gene_id: SAMN05421781_1004
symbol: grpE
gene_biotype: protein_coding
description:
  Molecular chaperone GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP [...]


ensembl_gene_id: SAMN05421781_1005
symbol: hrcA
gene_biotype: protein_coding
description:
  Heat-inducible transcription repressor HrcA; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons.


ensembl_gene_id: SAMN05421781_1006
symbol: SDW25817.1
gene_biotype: protein_coding
description:
  Oxygen-independent coproporphyrinogen-3 oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: SAMN05421781_1007
symbol: lepA
gene_biotype: protein_coding
description:
  GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.


ensembl_gene_id: SAMN05421781_1014
symbol: rsfS
gene_biotype: protein_coding
description:
  Ribosome-associated protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.


ensembl_gene_id: SAMN05421781_1016
symbol: nadD
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).


ensembl_gene_id: SAMN05421781_1018
symbol: aroE
gene_biotype: protein_coding
description:
  Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).


ensembl_gene_id: SAMN05421781_1028
symbol: SDW26480.1
gene_biotype: protein_coding
description:
  Bacterial nucleoid protein Hbs; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.


ensembl_gene_id: SAMN05421781_1033
symbol: mtnN
gene_biotype: protein_coding
description:
  Adenosylhomocysteine nucleosidase; Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'- methylthioribose and S-ribosylhomocysteine, respectively. Belongs to the PNP/UDP phosphorylase family. MtnN subfamily.


ensembl_gene_id: SAMN05421781_1036
symbol: greA
gene_biotype: protein_coding
description:
  Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.


ensembl_gene_id: SAMN05421781_1038
symbol: mltG
gene_biotype: protein_coding
description:
  UPF0755 protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family.


ensembl_gene_id: SAMN05421781_1040
symbol: SDW26799.1
gene_biotype: protein_coding
description:
  Putative holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.


ensembl_gene_id: SAMN05421781_1042
symbol: alaS
gene_biotype: protein_coding
description:
  alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.


ensembl_gene_id: SAMN05421781_1043
symbol: recD2
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase, RecD/TraA family; DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity; Belongs to the RecD family. RecD-like subfamily.


ensembl_gene_id: SAMN05421781_1045
symbol: mnmA
gene_biotype: protein_coding
description:
  tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.


ensembl_gene_id: SAMN05421781_1054
symbol: aspS
gene_biotype: protein_coding
description:
  aspartyl-tRNA synthetase; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor end of tRNA(Asp). Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.


ensembl_gene_id: SAMN05421781_1056
symbol: dtd
gene_biotype: protein_coding
description:
  D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family.


ensembl_gene_id: SAMN05421781_1057
symbol: SDW27363.1
gene_biotype: protein_coding
description:
  GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.


ensembl_gene_id: SAMN05421781_1058
symbol: apt
gene_biotype: protein_coding
description:
  Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.


ensembl_gene_id: SAMN05421781_1061
symbol: secF
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecF/SecD/SecF fusion protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: SAMN05421781_1062
symbol: secD
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecD/SecD/SecF fusion protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: SAMN05421781_1065
symbol: tgt
gene_biotype: protein_coding
description:
  tRNA-guanine transglycosylase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the [...]


ensembl_gene_id: SAMN05421781_1066
symbol: queA
gene_biotype: protein_coding
description:
  S-adenosylmethionine--tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).


ensembl_gene_id: SAMN05421781_1067
symbol: ruvB
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase subunit RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.


ensembl_gene_id: SAMN05421781_1068
symbol: ruvA
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase subunit RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.


ensembl_gene_id: SAMN05421781_1073
symbol: obg
gene_biotype: protein_coding
description:
  GTP-binding protein; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.


ensembl_gene_id: SAMN05421781_1076
symbol: hemH
gene_biotype: protein_coding
description:
  Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.


ensembl_gene_id: SAMN05421781_1077
symbol: hemE
gene_biotype: protein_coding
description:
  Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.


ensembl_gene_id: SAMN05421781_1084
symbol: serC
gene_biotype: protein_coding
description:
  Phosphoserine aminotransferase apoenzyme; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine.


ensembl_gene_id: SAMN05421781_1090
symbol: prsA
gene_biotype: protein_coding
description:
  Peptidylprolyl isomerase/foldase protein PrsA; Plays a major role in protein secretion by helping the post- translocational extracellular folding of several secreted proteins.


ensembl_gene_id: SAMN05421781_1093
symbol: yidC
gene_biotype: protein_coding
description:
  YidC/Oxa1 family membrane protein insertase; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins; Belongs to the OXA1/ALB3/YidC family. Type 2 subfamily.


ensembl_gene_id: SAMN05421781_1096
symbol: SDW28813.1
gene_biotype: protein_coding
description:
  UPF0342 protein SAMN05421781_1096; Cell fate regulator YlbF, YheA/YmcA/DUF963 family (controls sporulation, competence, biofilm development); Belongs to the UPF0342 family.


ensembl_gene_id: SAMN05421781_1108
symbol: SDW29106.1
gene_biotype: protein_coding
description:
  Homodimeric glycerol 3-phosphate dehydrogenase (quinone); Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: SAMN05421781_1109
symbol: glpK
gene_biotype: protein_coding
description:
  Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.


ensembl_gene_id: SAMN05421781_1110
symbol: SDW29164.1
gene_biotype: protein_coding
description:
  Glycerol uptake operon antiterminator; Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA.


ensembl_gene_id: SAMN05421781_1115
symbol: SDW29281.1
gene_biotype: protein_coding
description:
  tRNA (cytidine/uridine-2'-O-)-methyltransferase; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.


ensembl_gene_id: SAMN05421781_1116
symbol: SDW29316.1
gene_biotype: protein_coding
description:
  methylated-DNA-[protein]-cysteine S-methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated.


ensembl_gene_id: SAMN05421781_1117
symbol: queG
gene_biotype: protein_coding
description:
  Epoxyqueuosine reductase; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr); Belongs to the QueG family.


ensembl_gene_id: SAMN05421781_1154
symbol: rsbW
gene_biotype: protein_coding
description:
  Serine/threonine-protein kinase RsbW; Negative regulator of sigma-B activity. Phosphorylates and inactivates its specific antagonist protein, RsbV. Upon phosphorylation of RsbV, RsbW is released and binds to sigma-B, thereby blocking its ability to form an RNA polymerase holoenzyme (E-sigma-B).


ensembl_gene_id: SAMN05421781_1161
symbol: SDW36795.1
gene_biotype: protein_coding
description:
  Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.


ensembl_gene_id: SAMN05421781_1162
symbol: nnrD
gene_biotype: protein_coding
description:
  NAD(P)H-hydrate epimerase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration.  Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of bot [...]


ensembl_gene_id: SAMN05421781_1163
symbol: acpS
gene_biotype: protein_coding
description:
  Holo-[acyl-carrier-protein] synthase; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family.


ensembl_gene_id: SAMN05421781_1172
symbol: prfC
gene_biotype: protein_coding
description:
  Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.


ensembl_gene_id: SAMN05421781_1175
symbol: SDW37143.1
gene_biotype: protein_coding
description:
  Phosphatidylglycerophosphate synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: SAMN05421781_1177
symbol: SDW37190.1
gene_biotype: protein_coding
description:
  iron(III) transport system ATP-binding protein/putative spermidine/putrescine transport system ATP-binding protein.


ensembl_gene_id: SAMN05421781_1188
symbol: SDW37448.1
gene_biotype: protein_coding
description:
  Haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E.


ensembl_gene_id: SAMN05421781_1203
symbol: thiE
gene_biotype: protein_coding
description:
  Thiamine-phosphate diphosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.


ensembl_gene_id: SAMN05421781_1204
symbol: thiM
gene_biotype: protein_coding
description:
  Hydroxyethylthiazole kinase; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family.


ensembl_gene_id: SAMN05421781_1206
symbol: SDW37887.1
gene_biotype: protein_coding
description:
  Hydrophobic/amphiphilic exporter-1, HAE1 family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: SAMN05421781_1209
symbol: SDW37963.1
gene_biotype: protein_coding
description:
  Cardiolipin synthase; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol.


ensembl_gene_id: SAMN05421781_1217
symbol: thiG
gene_biotype: protein_coding
description:
  Thiazole-phosphate synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.


ensembl_gene_id: SAMN05421781_1230
symbol: SDW38492.1
gene_biotype: protein_coding
description:
  PTS system maltose-specific IIB component, Glc family /PTS system maltose-specific IIC component, Glc family.


ensembl_gene_id: SAMN05421781_1251
symbol: rpsN
gene_biotype: protein_coding
description:
  SSU ribosomal protein S14P; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.


ensembl_gene_id: SAMN05421781_1253
symbol: SDW39111.1
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier protein] reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: SAMN05421781_1256
symbol: SDW39196.1
gene_biotype: protein_coding
description:
  Cytochrome aa3 quinol oxidase subunit 1 apoprotein; Belongs to the heme-copper respiratory oxidase family.


ensembl_gene_id: SAMN05421781_1257
symbol: SDW39228.1
gene_biotype: protein_coding
description:
  Cytochrome aa3 quinol oxidase subunit 2; Catalyzes quinol oxidation with the concomitant reduction of oxygen to water. Subunit II transfers the electrons from a quinol to the binuclear center of the catalytic subunit I.


ensembl_gene_id: SAMN05421781_1259
symbol: SDW39286.1
gene_biotype: protein_coding
description:
  Molybdopterin adenylyltransferase; May be involved in the biosynthesis of molybdopterin. Belongs to the MoaB/Mog family.


ensembl_gene_id: SAMN05421781_1260
symbol: moaA
gene_biotype: protein_coding
description:
  Cyclic pyranopterin monophosphate synthase subunit MoaA; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.


ensembl_gene_id: SAMN05421781_1261
symbol: SDW39355.1
gene_biotype: protein_coding
description:
  Molybdenum cofactor guanylyltransferase; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor; Belongs to the MobA family.


ensembl_gene_id: SAMN05421781_1265
symbol: SDW39468.1
gene_biotype: protein_coding
description:
  Molybdopterin molybdochelatase; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.


ensembl_gene_id: SAMN05421781_1266
symbol: moaC
gene_biotype: protein_coding
description:
  Cyclic pyranopterin monophosphate synthase subunit MoaC; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family.


ensembl_gene_id: SAMN05421781_1267
symbol: SDW39523.1
gene_biotype: protein_coding
description:
  Molybdate transport system permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: SAMN05421781_1277
symbol: SDW39817.1
gene_biotype: protein_coding
description:
  Thiaminase; Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway. Thus, catalyzes the conversion of 4- amino-5-aminomethyl-2-methylpyrimidine to 4-amino-5-hydroxymethyl-2- methylpyrimidine (HMP); Belongs to the TenA family.


ensembl_gene_id: SAMN05421781_1290
symbol: SDW40215.1
gene_biotype: protein_coding
description:
  Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: SAMN05421781_1309
symbol: SDW40685.1
gene_biotype: protein_coding
description:
  4-hydroxy-3-polyprenylbenzoate decarboxylase; Involved in the non-oxidative decarboxylation and detoxification of phenolic derivatives. Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for phenolic acid decarboxylase.


ensembl_gene_id: SAMN05421781_1311
symbol: murE-2
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan.


ensembl_gene_id: SAMN05421781_1328
symbol: SDW41235.1
gene_biotype: protein_coding
description:
  Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.


ensembl_gene_id: SAMN05421781_1358
symbol: lcdH
gene_biotype: protein_coding
description:
  Carnitine 3-dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-carnitine to 3- dehydrocarnitine.


ensembl_gene_id: SAMN05421781_1371
symbol: SDW42480.1
gene_biotype: protein_coding
description:
  Oxidoreductase alpha (molybdopterin) subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: SAMN05421781_1393
symbol: SDW42969.1
gene_biotype: protein_coding
description:
  NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC.


ensembl_gene_id: SAMN05421781_1403
symbol: gmd
gene_biotype: protein_coding
description:
  GDPmannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.


ensembl_gene_id: SAMN05421781_1404
symbol: fcl
gene_biotype: protein_coding
description:
  GDP-L-fucose synthase; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction.


ensembl_gene_id: SAMN05421781_1418
symbol: cysQ
gene_biotype: protein_coding
description:
  3'(2'),5'-bisphosphate nucleotidase; Converts adenosine-3',5'-bisphosphate (PAP) to AMP. Belongs to the inositol monophosphatase superfamily. CysQ family.


ensembl_gene_id: SAMN05421781_1426
symbol: SDW43786.1
gene_biotype: protein_coding
description:
  DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: SAMN05421781_1450
symbol: nagB
gene_biotype: protein_coding
description:
  Glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion.


ensembl_gene_id: SAMN05421781_1484
symbol: fabZ
gene_biotype: protein_coding
description:
  3-hydroxyacyl-[acyl-carrier-protein] dehydratase; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.


ensembl_gene_id: SAMN05421781_1487
symbol: murA
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.


ensembl_gene_id: SAMN05421781_1489
symbol: atpC
gene_biotype: protein_coding
description:
  ATP synthase F1 subcomplex epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.


ensembl_gene_id: SAMN05421781_1490
symbol: atpD
gene_biotype: protein_coding
description:
  ATP synthase F1 subcomplex beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.


ensembl_gene_id: SAMN05421781_1491
symbol: atpG
gene_biotype: protein_coding
description:
  ATP synthase F1 subcomplex gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.


ensembl_gene_id: SAMN05421781_1492
symbol: atpA
gene_biotype: protein_coding
description:
  ATP synthase F1 subcomplex alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.


ensembl_gene_id: SAMN05421781_1493
symbol: atpH
gene_biotype: protein_coding
description:
  ATP synthase F1 subcomplex delta subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: SAMN05421781_1494
symbol: atpF
gene_biotype: protein_coding
description:
  ATP synthase F0 subcomplex B subunit; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.


ensembl_gene_id: SAMN05421781_1495
symbol: atpE
gene_biotype: protein_coding
description:
  ATP synthase F0 subcomplex C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: SAMN05421781_1496
symbol: atpB
gene_biotype: protein_coding
description:
  F-type H+-transporting ATPase subunit a; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.


ensembl_gene_id: SAMN05421781_1498
symbol: upp
gene_biotype: protein_coding
description:
  Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.


ensembl_gene_id: SAMN05421781_1500
symbol: glyA
gene_biotype: protein_coding
description:
  Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.


ensembl_gene_id: SAMN05421781_1504
symbol: SDW45618.1
gene_biotype: protein_coding
description:
  L-threonylcarbamoyladenylate synthase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.


ensembl_gene_id: SAMN05421781_1505
symbol: prmC
gene_biotype: protein_coding
description:
  Release factor glutamine methyltransferase; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.


ensembl_gene_id: SAMN05421781_1506
symbol: prfA
gene_biotype: protein_coding
description:
  Bacterial peptide chain release factor 1 (bRF-1); Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.


ensembl_gene_id: SAMN05421781_1510
symbol: rho
gene_biotype: protein_coding
description:
  Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.


ensembl_gene_id: SAMN05421781_1514
symbol: tal
gene_biotype: protein_coding
description:
  Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.


ensembl_gene_id: SAMN05421781_1518
symbol: pyrG
gene_biotype: protein_coding
description:
  CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.


ensembl_gene_id: SAMN05421781_1519
symbol: rpoE
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit delta; Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; Belongs to the RpoE family.


ensembl_gene_id: SAMN05421781_1533
symbol: ldh
gene_biotype: protein_coding
description:
  L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family.


ensembl_gene_id: SAMN05421781_1571
symbol: hisF
gene_biotype: protein_coding
description:
  Cyclase; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.


ensembl_gene_id: SAMN05421781_1572
symbol: hisA
gene_biotype: protein_coding
description:
  1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase.


ensembl_gene_id: SAMN05421781_1573
symbol: hisH
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase subunit hisH; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.


ensembl_gene_id: SAMN05421781_1575
symbol: hisD
gene_biotype: protein_coding
description:
  Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.


ensembl_gene_id: SAMN05421781_1576
symbol: hisG
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase catalytic subunit; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Short subfamily.


ensembl_gene_id: SAMN05421781_1577
symbol: hisZ
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase regulatory subunit; Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine.


ensembl_gene_id: SAMN05421781_1580
symbol: lgt
gene_biotype: protein_coding
description:
  Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.


ensembl_gene_id: SAMN05421781_1581
symbol: hprK
gene_biotype: protein_coding
description:
  Hpr(Ser) kinase/phosphatase; Catalyzes the ATP- as well as the pyrophosphate-dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK/P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P-Ser-HPr). The two antagonistic activities of HprK/P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable car [...]


ensembl_gene_id: SAMN05421781_1585
symbol: uvrA
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.


ensembl_gene_id: SAMN05421781_1586
symbol: uvrB
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate  [...]


ensembl_gene_id: SAMN05421781_1591
symbol: secA
gene_biotype: protein_coding
description:
  Protein translocase subunit secA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane.


ensembl_gene_id: SAMN05421781_1592
symbol: hpf
gene_biotype: protein_coding
description:
  SSU ribosomal protein S30P /sigma 54 modulation protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.


ensembl_gene_id: SAMN05421781_1604
symbol: SDW52161.1
gene_biotype: protein_coding
description:
  Putative SOS response-associated peptidase YedK; Belongs to the SOS response-associated peptidase family.


ensembl_gene_id: SAMN05421781_1637
symbol: fliW
gene_biotype: protein_coding
description:
  Flagellar assembly factor FliW; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum.


ensembl_gene_id: SAMN05421781_1643
symbol: SDW53269.1
gene_biotype: protein_coding
description:
  Two-component system, NarL family, sensor histidine kinase DegS; Member of the two-component regulatory system DegS/DegU, which plays an important role in the transition growth phase.


ensembl_gene_id: SAMN05421781_1647
symbol: rbsK
gene_biotype: protein_coding
description:
  Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.


ensembl_gene_id: SAMN05421781_1655
symbol: SDW53634.1
gene_biotype: protein_coding
description:
  4Fe-4S binding domain-containing protein; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.


ensembl_gene_id: SAMN05421781_1664
symbol: SDW53900.1
gene_biotype: protein_coding
description:
  Zinc-binding alcohol dehydrogenase family protein; Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily.


ensembl_gene_id: SAMN05421781_1691
symbol: SDW54683.1
gene_biotype: protein_coding
description:
  PTS system beta-glucoside-specific IIA component, Glc family /PTS system beta-glucoside-specific IIB component, Glc family /PTS system beta-glucoside-specific IIC component, Glc family.


ensembl_gene_id: SAMN05421781_1703
symbol: fdhD
gene_biotype: protein_coding
description:
  FdhD protein; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.


ensembl_gene_id: SAMN05421781_1731
symbol: crcB
gene_biotype: protein_coding
description:
  CrcB protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.


ensembl_gene_id: SAMN05421781_1732
symbol: crcB-2
gene_biotype: protein_coding
description:
  Camphor resistance protein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.


ensembl_gene_id: SAMN05421781_1744
symbol: SDW56062.1
gene_biotype: protein_coding
description:
  NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: SAMN05421781_1761
symbol: fabH
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.


ensembl_gene_id: SAMN05421781_1783
symbol: mqnD
gene_biotype: protein_coding
description:
  1,4-dihydroxy-6-naphthoate synthase; Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2); Belongs to the MqnA/MqnD family. MqnD subfamily.


ensembl_gene_id: SAMN05421781_1784
symbol: mqnB
gene_biotype: protein_coding
description:
  Futalosine hydrolase; Catalyzes the hydrolysis of futalosine (FL) to dehypoxanthine futalosine (DHFL) and hypoxanthine, a step in the biosynthesis of menaquinone (MK, vitamin K2).


ensembl_gene_id: SAMN05421781_1799
symbol: dinB
gene_biotype: protein_coding
description:
  DNA polymerase-4; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.


ensembl_gene_id: SAMN05421781_1805
symbol: aroD
gene_biotype: protein_coding
description:
  3-dehydroquinate dehydratase; Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis- dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3-dehydroshikimate. Belongs to the type-I 3-dehydroquinase family.


ensembl_gene_id: SAMN05421781_1807
symbol: aroK
gene_biotype: protein_coding
description:
  Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.


ensembl_gene_id: SAMN05421781_1810
symbol: SDW57671.1
gene_biotype: protein_coding
description:
  Gas vesicle protein; Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth.


ensembl_gene_id: SAMN05421781_1819
symbol: gvpA
gene_biotype: protein_coding
description:
  Gas vesicle protein; Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth. GvpA type proteins form the essential core of the structure.


ensembl_gene_id: SAMN05421781_1823
symbol: ctaB
gene_biotype: protein_coding
description:
  Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group; Belongs to the UbiA prenyltransferase family. Protoheme IX farnesyltransferase subfamily.


ensembl_gene_id: SAMN05421781_1833
symbol: glcB
gene_biotype: protein_coding
description:
  Malate synthase; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.


ensembl_gene_id: SAMN05421781_1840
symbol: rocD
gene_biotype: protein_coding
description:
  Ornithine--oxo-acid transaminase; Catalyzes the interconversion of ornithine to glutamate semialdehyde.


ensembl_gene_id: SAMN05421781_1842
symbol: SDW58447.1
gene_biotype: protein_coding
description:
  Na+/H+-dicarboxylate symporter; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: SAMN05421781_1855
symbol: ade
gene_biotype: protein_coding
description:
  Adenine deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family.


ensembl_gene_id: SAMN05421781_1860
symbol: glmS
gene_biotype: protein_coding
description:
  Glutamine--fructose-6-phosphate transaminase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.


ensembl_gene_id: SAMN05421781_1862
symbol: glmM
gene_biotype: protein_coding
description:
  Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.


ensembl_gene_id: SAMN05421781_1864
symbol: dacA
gene_biotype: protein_coding
description:
  Diadenylate cyclase; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria.


ensembl_gene_id: SAMN05421781_1882
symbol: SDW59233.1
gene_biotype: protein_coding
description:
  Methylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate.


ensembl_gene_id: SAMN05421781_1886
symbol: dinB-2
gene_biotype: protein_coding
description:
  DNA polymerase-4/DNA polymerase V; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.


ensembl_gene_id: SAMN05421781_1909
symbol: SDW59784.1
gene_biotype: protein_coding
description:
  Cation diffusion facilitator family transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.


ensembl_gene_id: SAMN05421781_1953
symbol: selO
gene_biotype: protein_coding
description:
  Uncharacterized conserved protein YdiU, UPF0061 family; Catalyzes the transfer of adenosine 5'-monophosphate (AMP) to Ser, Thr or Tyr residues of target proteins (AMPylation). Belongs to the SELO family.


ensembl_gene_id: SAMN05421781_1967
symbol: hmp
gene_biotype: protein_coding
description:
  Nitric oxide dioxygenase; Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress; Belongs to the globin family. Two-domain flavohemoproteins subfamily.


ensembl_gene_id: SAMN05421781_1974
symbol: SDW64611.1
gene_biotype: protein_coding
description:
  Thiaminase (transcriptional activator TenA); Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway; Belongs to the TenA family.


ensembl_gene_id: SAMN05421781_1985
symbol: fumC
gene_biotype: protein_coding
description:
  Fumarase, class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.


ensembl_gene_id: SAMN05421781_1994
symbol: SDW65144.1
gene_biotype: protein_coding
description:
  Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.


ensembl_gene_id: SAMN05421781_2001
symbol: SDW65350.1
gene_biotype: protein_coding
description:
  PTS system D-glucose-specific IIA component, Glc family /PTS system D-glucose-specific IIB component, Glc family /PTS system D-glucose-specific IIC component, Glc family.


ensembl_gene_id: SAMN05421781_2005
symbol: SDW65468.1
gene_biotype: protein_coding
description:
  23S rRNA pseudouridine1911/1915/1917 synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: SAMN05421781_2006
symbol: nadK
gene_biotype: protein_coding
description:
  NAD+ kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.


ensembl_gene_id: SAMN05421781_2015
symbol: mecA
gene_biotype: protein_coding
description:
  Adapter protein MecA 1/2; Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis. Acts negatively in the development of competence by binding ComK and recruiting it to the ClpCP protease. When overexpressed, inhibits sporulation. Also involved in Spx degradation by ClpC.


ensembl_gene_id: SAMN05421781_2016
symbol: spxA
gene_biotype: protein_coding
description:
  Regulatory protein spx; Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development- promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress. Belongs to the ArsC family. Spx subfamily.


ensembl_gene_id: SAMN05421781_2017
symbol: SDW65797.1
gene_biotype: protein_coding
description:
  Lactaldehyde dehydrogenase / glycolaldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: SAMN05421781_2025
symbol: trpS
gene_biotype: protein_coding
description:
  tryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: SAMN05421781_2027
symbol: SDW66045.1
gene_biotype: protein_coding
description:
  tRNA nucleotidyltransferase (CCA-adding enzyme); Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.


ensembl_gene_id: SAMN05421781_2028
symbol: SDW66151.1
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.


ensembl_gene_id: SAMN05421781_2030
symbol: SDW66199.1
gene_biotype: protein_coding
description:
  Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.


ensembl_gene_id: SAMN05421781_2033
symbol: argD
gene_biotype: protein_coding
description:
  Acetylornithine aminotransferase apoenzyme; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.


ensembl_gene_id: SAMN05421781_2034
symbol: argB
gene_biotype: protein_coding
description:
  N-acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.


ensembl_gene_id: SAMN05421781_2035
symbol: argJ
gene_biotype: protein_coding
description:
  Glutamate N-acetyltransferase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family.


ensembl_gene_id: SAMN05421781_2036
symbol: argC
gene_biotype: protein_coding
description:
  N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.


ensembl_gene_id: SAMN05421781_2051
symbol: SDW66729.1
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: SAMN05421781_2053
symbol: SDW66787.1
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase, biotin carboxylase subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: SAMN05421781_2060
symbol: queF
gene_biotype: protein_coding
description:
  7-cyano-7-deazaguanine reductase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1). Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily.


ensembl_gene_id: SAMN05421781_2061
symbol: queE
gene_biotype: protein_coding
description:
  preQ(0) biosynthesis protein QueE; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds.


ensembl_gene_id: SAMN05421781_2063
symbol: queC
gene_biotype: protein_coding
description:
  7-cyano-7-deazaguanine synthase; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)).


ensembl_gene_id: SAMN05421781_2064
symbol: dcd
gene_biotype: protein_coding
description:
  dCTP deaminase; Bifunctional enzyme that catalyzes both the deamination of dCTP to dUTP and the hydrolysis of dUTP to dUMP without releasing the toxic dUTP intermediate.


ensembl_gene_id: SAMN05421781_2081
symbol: pstB
gene_biotype: protein_coding
description:
  Phosphate ABC transporter ATP-binding protein, PhoT family; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.


ensembl_gene_id: SAMN05421781_2083
symbol: SDW67576.1
gene_biotype: protein_coding
description:
  Phosphate ABC transporter membrane protein 1, PhoT family; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: SAMN05421781_2088
symbol: rplU
gene_biotype: protein_coding
description:
  LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.


ensembl_gene_id: SAMN05421781_2092
symbol: minC
gene_biotype: protein_coding
description:
  Septum site-determining protein MinC; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family.


ensembl_gene_id: SAMN05421781_2098
symbol: SDW67944.1
gene_biotype: protein_coding
description:
  Dihydrofolate synthase / folylpolyglutamate synthase; Belongs to the folylpolyglutamate synthase family.


ensembl_gene_id: SAMN05421781_2099
symbol: valS
gene_biotype: protein_coding
description:
  valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.


ensembl_gene_id: SAMN05421781_2102
symbol: SDW68044.1
gene_biotype: protein_coding
description:
  uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.


ensembl_gene_id: SAMN05421781_2103
symbol: hemC
gene_biotype: protein_coding
description:
  Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.


ensembl_gene_id: SAMN05421781_2105
symbol: hemA
gene_biotype: protein_coding
description:
  glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).


ensembl_gene_id: SAMN05421781_2106
symbol: engB
gene_biotype: protein_coding
description:
  GTP-binding protein; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.


ensembl_gene_id: SAMN05421781_2107
symbol: lon
gene_biotype: protein_coding
description:
  ATP-dependent proteinase. Serine peptidase. MEROPS family S16; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.


ensembl_gene_id: SAMN05421781_2108
symbol: clpX
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.


ensembl_gene_id: SAMN05421781_2109
symbol: tig
gene_biotype: protein_coding
description:
  Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.


ensembl_gene_id: SAMN05421781_2111
symbol: leuD
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydratase, small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily.


ensembl_gene_id: SAMN05421781_2112
symbol: leuC
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydratase, large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.


ensembl_gene_id: SAMN05421781_2113
symbol: leuB
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.


ensembl_gene_id: SAMN05421781_2114
symbol: leuA
gene_biotype: protein_coding
description:
  2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily.


ensembl_gene_id: SAMN05421781_2115
symbol: ilvC
gene_biotype: protein_coding
description:
  Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate.


ensembl_gene_id: SAMN05421781_2118
symbol: ilvE
gene_biotype: protein_coding
description:
  Branched chain amino acid aminotransferase apoenzyme; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: SAMN05421781_2122
symbol: SDW68507.1
gene_biotype: protein_coding
description:
  XTP/dITP diphosphohydrolase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.


ensembl_gene_id: SAMN05421781_2123
symbol: rph
gene_biotype: protein_coding
description:
  RNAse PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation.


ensembl_gene_id: SAMN05421781_2125
symbol: SDW68586.1
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate--protein phosphotransferase; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr).


ensembl_gene_id: SAMN05421781_2132
symbol: uvrC
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.


ensembl_gene_id: SAMN05421781_2136
symbol: mutS2
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS2; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.


ensembl_gene_id: SAMN05421781_2139
symbol: SDW68954.1
gene_biotype: protein_coding
description:
  Cell division protein ZapA; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.


ensembl_gene_id: SAMN05421781_2140
symbol: pheT
gene_biotype: protein_coding
description:
  phenylalanyl-tRNA synthetase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.


ensembl_gene_id: SAMN05421781_2141
symbol: pheS
gene_biotype: protein_coding
description:
  phenylalanyl-tRNA synthetase, alpha subunit; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.


ensembl_gene_id: SAMN05421781_2142
symbol: SDW69032.1
gene_biotype: protein_coding
description:
  RNA methyltransferase, TrmH family; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: SAMN05421781_2145
symbol: rplT
gene_biotype: protein_coding
description:
  LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.


ensembl_gene_id: SAMN05421781_2147
symbol: infC
gene_biotype: protein_coding
description:
  Bacterial translation initiation factor 3 (bIF-3); IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.


ensembl_gene_id: SAMN05421781_2149
symbol: thrS
gene_biotype: protein_coding
description:
  threonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr).


ensembl_gene_id: SAMN05421781_2151
symbol: mqnC
gene_biotype: protein_coding
description:
  De-hypoxanthine futalosine cyclase; Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2).


ensembl_gene_id: SAMN05421781_2154
symbol: nrdR
gene_biotype: protein_coding
description:
  Transcriptional repressor NrdR; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family.


ensembl_gene_id: SAMN05421781_2155
symbol: speH
gene_biotype: protein_coding
description:
  Adenosylmethionine decarboxylase proenzyme; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the prokaryotic AdoMetDC family. Type 1 subfamily.


ensembl_gene_id: SAMN05421781_2156
symbol: SDW69388.1
gene_biotype: protein_coding
description:
  Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: SAMN05421781_2157
symbol: coaE
gene_biotype: protein_coding
description:
  dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.


ensembl_gene_id: SAMN05421781_2158
symbol: mutM
gene_biotype: protein_coding
description:
  DNA-(apurinic or apyrimidinic site) lyase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates.


ensembl_gene_id: SAMN05421781_2159
symbol: polA
gene_biotype: protein_coding
description:
  DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.


ensembl_gene_id: SAMN05421781_2162
symbol: mdh
gene_biotype: protein_coding
description:
  Malate dehydrogenase (NAD); Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.


ensembl_gene_id: SAMN05421781_2168
symbol: pfkA
gene_biotype: protein_coding
description:
  6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.


ensembl_gene_id: SAMN05421781_2169
symbol: accA
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase carboxyl transferase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.


ensembl_gene_id: SAMN05421781_2170
symbol: accD
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase carboxyltransferase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.


ensembl_gene_id: SAMN05421781_2181
symbol: ackA
gene_biotype: protein_coding
description:
  Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.


ensembl_gene_id: SAMN05421781_2183
symbol: tpx
gene_biotype: protein_coding
description:
  Thiol peroxidase (atypical 2-Cys peroxiredoxin); Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Tpx subfamily.


ensembl_gene_id: SAMN05421781_2187
symbol: thiI
gene_biotype: protein_coding
description:
  Thiamine biosynthesis protein ThiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS.


ensembl_gene_id: SAMN05421781_2192
symbol: rpsD
gene_biotype: protein_coding
description:
  SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.


ensembl_gene_id: SAMN05421781_2193
symbol: tyrS
gene_biotype: protein_coding
description:
  tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily.


ensembl_gene_id: SAMN05421781_2205
symbol: SDW74037.1
gene_biotype: protein_coding
description:
  tRNA-U20-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.


ensembl_gene_id: SAMN05421781_2207
symbol: SDW74088.1
gene_biotype: protein_coding
description:
  Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.


ensembl_gene_id: SAMN05421781_2208
symbol: SDW74123.1
gene_biotype: protein_coding
description:
  Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives.


ensembl_gene_id: SAMN05421781_2213
symbol: hslO
gene_biotype: protein_coding
description:
  Molecular chaperone Hsp33; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress.


ensembl_gene_id: SAMN05421781_2214
symbol: ftsH
gene_biotype: protein_coding
description:
  Membrane protease FtsH catalytic subunit; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family.  In the central section; belongs to the AAA ATPase family.


ensembl_gene_id: SAMN05421781_2215
symbol: SDW74327.1
gene_biotype: protein_coding
description:
  Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.


ensembl_gene_id: SAMN05421781_2216
symbol: tilS
gene_biotype: protein_coding
description:
  tRNA(Ile)-lysidine synthase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.


ensembl_gene_id: SAMN05421781_2225
symbol: mfd
gene_biotype: protein_coding
description:
  Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.


ensembl_gene_id: SAMN05421781_2226
symbol: pth
gene_biotype: protein_coding
description:
  peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.


ensembl_gene_id: SAMN05421781_2227
symbol: rplY
gene_biotype: protein_coding
description:
  LSU ribosomal protein L25P; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.


ensembl_gene_id: SAMN05421781_2228
symbol: prs
gene_biotype: protein_coding
description:
  Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.


ensembl_gene_id: SAMN05421781_2229
symbol: glmU
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine pyrophosphorylase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain.


ensembl_gene_id: SAMN05421781_2233
symbol: ispE
gene_biotype: protein_coding
description:
  4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.


ensembl_gene_id: SAMN05421781_2235
symbol: rsmA
gene_biotype: protein_coding
description:
  Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.


ensembl_gene_id: SAMN05421781_2236
symbol: rnmV
gene_biotype: protein_coding
description:
  RNAse M5; Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step.


ensembl_gene_id: SAMN05421781_2238
symbol: metG
gene_biotype: protein_coding
description:
  methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 2B subfamily.


ensembl_gene_id: SAMN05421781_2241
symbol: rsmI
gene_biotype: protein_coding
description:
  16S rRNA (cytidine1402-2'-O)-methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.


ensembl_gene_id: SAMN05421781_2248
symbol: SDW75223.1
gene_biotype: protein_coding
description:
  Regulator of replication initiation timing; Involved in initiation control of chromosome replication. Belongs to the YabA family.


ensembl_gene_id: SAMN05421781_2254
symbol: tmk
gene_biotype: protein_coding
description:
  Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.


ensembl_gene_id: SAMN05421781_2271
symbol: SDW75883.1
gene_biotype: protein_coding
description:
  Solute carrier family 5 (high affinity choline transporter), member 7; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.


ensembl_gene_id: SAMN05421781_2277
symbol: recR
gene_biotype: protein_coding
description:
  DNA replication and repair protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.


ensembl_gene_id: SAMN05421781_2278
symbol: SDW76063.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.


ensembl_gene_id: SAMN05421781_2279
symbol: dnaX
gene_biotype: protein_coding
description:
  DNA polymerase III, tau subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: SAMN05421781_2282
symbol: tadA
gene_biotype: protein_coding
description:
  tRNA(adenine34) deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: SAMN05421781_2291
symbol: serS
gene_biotype: protein_coding
description:
  seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).


ensembl_gene_id: SAMN05421781_2292
symbol: pdxT
gene_biotype: protein_coding
description:
  Pyridoxal phosphate synthase yaaE subunit; Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS.


ensembl_gene_id: SAMN05421781_2293
symbol: pdxS
gene_biotype: protein_coding
description:
  Pyridoxal phosphate synthase yaaD subunit; Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5- phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively. Belongs to the PdxS/SNZ family.


ensembl_gene_id: SAMN05421781_2294
symbol: SDW76437.1
gene_biotype: protein_coding
description:
  D-Ala-D-Ala carboxypeptidase A. Serine peptidase. MEROPS family S11; Belongs to the peptidase S11 family.


ensembl_gene_id: SAMN05421781_2295
symbol: guaB
gene_biotype: protein_coding
description:
  Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.


ensembl_gene_id: SAMN05421781_2299
symbol: gyrA
gene_biotype: protein_coding
description:
  DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: SAMN05421781_2300
symbol: gyrB
gene_biotype: protein_coding
description:
  DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: SAMN05421781_2302
symbol: recF
gene_biotype: protein_coding
description:
  DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family.


ensembl_gene_id: SAMN05421781_2304
symbol: SDW76710.1
gene_biotype: protein_coding
description:
  DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]


ensembl_gene_id: SAMN05421781_2305
symbol: dnaA
gene_biotype: protein_coding
description:
  Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.


ensembl_gene_id: SAMN05421781_2306
symbol: rpmH
gene_biotype: protein_coding
description:
  LSU ribosomal protein L34P; Manually curated; Belongs to the bacterial ribosomal protein bL34 family.


ensembl_gene_id: SAMN05421781_2307
symbol: rnpA
gene_biotype: protein_coding
description:
  Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.


ensembl_gene_id: SAMN05421781_2309
symbol: mnmE
gene_biotype: protein_coding
description:
  tRNA modification GTPase; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.


ensembl_gene_id: SAMN05421781_2310
symbol: mnmG
gene_biotype: protein_coding
description:
  tRNA uridine 5-carboxymethylaminomethyl modification enzyme; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.


ensembl_gene_id: SAMN05421781_2311
symbol: rsmG
gene_biotype: protein_coding
description:
  16S rRNA m(7)G-527 methyltransferase; Specifically methylates the N7 position of guanine in position 535 of 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.


ensembl_gene_id: SAMN05421781_2319
symbol: ychF
gene_biotype: protein_coding
description:
  Hypothetical protein; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.


ensembl_gene_id: SAMN05421781_2321
symbol: SDW77176.1
gene_biotype: protein_coding
description:
  Single-strand binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.


ensembl_gene_id: SAMN05421781_2322
symbol: rpsR
gene_biotype: protein_coding
description:
  SSU ribosomal protein S18P; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.


ensembl_gene_id: SAMN05421781_2325
symbol: SDW77269.1
gene_biotype: protein_coding
description:
  c-di-AMP phosphodiesterase, consists of a GGDEF-like and DHH domains; Has phosphodiesterase (PDE) activity against cyclic-di-AMP (c-di-AMP); Belongs to the GdpP/PdeA phosphodiesterase family.


ensembl_gene_id: SAMN05421781_2327
symbol: SDW77320.1
gene_biotype: protein_coding
description:
  Primary replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.


ensembl_gene_id: SAMN05421781_2328
symbol: purA
gene_biotype: protein_coding
description:
  Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.


ensembl_gene_id: SAMN05421781_2340
symbol: rlmH
gene_biotype: protein_coding
description:
  23S rRNA (pseudouridine1915-N3)-methyltransferase; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.


ensembl_gene_id: SAMN05421781_2342
symbol: ung
gene_biotype: protein_coding
description:
  Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.


ensembl_gene_id: SAMN05421781_2351
symbol: SDW77913.1
gene_biotype: protein_coding
description:
  Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family.


ensembl_gene_id: SAMN05421781_2370
symbol: rpiA
gene_biotype: protein_coding
description:
  Ribose-5-phosphate isomerase; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.


ensembl_gene_id: SAMN05421781_2381
symbol: SDW78689.1
gene_biotype: protein_coding
description:
  Small multidrug resistance pump/multidrug resistance protein EbrA/multidrug resistance protein EbrB.


ensembl_gene_id: SAMN05421781_2388
symbol: SDW78866.1
gene_biotype: protein_coding
description:
  Glutamate-1-semialdehyde 2,1-aminomutase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: SAMN05421781_2407
symbol: SDW79301.1
gene_biotype: protein_coding
description:
  Arsenite efflux membrane protein ArsB; Involved in arsenical resistance. Thought to form the channel of an arsenite pump; Belongs to the ArsB family.


ensembl_gene_id: SAMN05421781_2413
symbol: kynU
gene_biotype: protein_coding
description:
  Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively.


ensembl_gene_id: SAMN05421781_2418
symbol: SDW79582.1
gene_biotype: protein_coding
description:
  MFS transporter, sugar porter (SP) family; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.


ensembl_gene_id: SAMN05421781_2419
symbol: lipL
gene_biotype: protein_coding
description:
  octanoyl-[GcvH]:protein N-octanoyltransferase; Catalyzes the amidotransfer (transamidation) of the octanoyl moiety from octanoyl-GcvH to the lipoyl domain of the E2 subunit of lipoate-dependent enzymes; Belongs to the octanoyltransferase LipL family.


ensembl_gene_id: SAMN05421781_2424
symbol: speE
gene_biotype: protein_coding
description:
  Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.


ensembl_gene_id: SAMN05421781_2430
symbol: SDW79873.1
gene_biotype: protein_coding
description:
  MFS transporter, DHA2 family, multidrug resistance protein; Manually curated; Belongs to the major facilitator superfamily.


ensembl_gene_id: SAMN05421781_2451
symbol: galK
gene_biotype: protein_coding
description:
  Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.


ensembl_gene_id: SAMN05421781_2465
symbol: aroA
gene_biotype: protein_coding
description:
  3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.


ensembl_gene_id: SAMN05421781_2467
symbol: SDW80749.1
gene_biotype: protein_coding
description:
  Nitric-oxide synthase; Catalyzes the production of nitric oxide. Belongs to the NOS family. Bacterial NOS oxygenase subfamily.


ensembl_gene_id: SAMN05421781_2469
symbol: uvsE
gene_biotype: protein_coding
description:
  UV-damage endonuclease; Component in a DNA repair pathway. Removal of UV-light damaged nucleotides. Recognizes pyrimidine dimers and cleave a phosphodiester bond immediately 5' to the lesion.


ensembl_gene_id: SAMN05421781_2476
symbol: SDW80997.1
gene_biotype: protein_coding
description:
  5-hydroxyisourate hydrolase; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.


ensembl_gene_id: SAMN05421781_2483
symbol: iolC
gene_biotype: protein_coding
description:
  5-dehydro-2-deoxygluconokinase; Catalyzes the phosphorylation of 5-dehydro-2-deoxy-D- gluconate (2-deoxy-5-keto-D-gluconate or DKG) to 6-phospho-5-dehydro-2- deoxy-D-gluconate (DKGP).


ensembl_gene_id: SAMN05421781_2503
symbol: SDW84305.1
gene_biotype: protein_coding
description:
  LysR family transcriptional regulator, repressor for citA; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: SAMN05421781_2562
symbol: purE
gene_biotype: protein_coding
description:
  5-(carboxyamino)imidazole ribonucleotide mutase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).


ensembl_gene_id: SAMN05421781_2563
symbol: purK
gene_biotype: protein_coding
description:
  5-(carboxyamino)imidazole ribonucleotide synthase; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR).


ensembl_gene_id: SAMN05421781_2566
symbol: purS
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to assist in  [...]


ensembl_gene_id: SAMN05421781_2567
symbol: purQ
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase subunit I; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to  [...]


ensembl_gene_id: SAMN05421781_2568
symbol: purL
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase subunit II; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to [...]


ensembl_gene_id: SAMN05421781_2569
symbol: purF
gene_biotype: protein_coding
description:
  Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.


ensembl_gene_id: SAMN05421781_2571
symbol: purN
gene_biotype: protein_coding
description:
  Phosphoribosylglycinamide formyltransferase-1; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.


ensembl_gene_id: SAMN05421781_2576
symbol: pcrB
gene_biotype: protein_coding
description:
  Putative glycerol-1-phosphate prenyltransferase; Prenyltransferase that catalyzes in vivo the transfer of the heptaprenyl moiety of heptaprenyl pyrophosphate (HepPP; 35 carbon atoms) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P), producing heptaprenylglyceryl phosphate (HepGP). This reaction is an ether-bond- formation step in the biosynthesis of archaea-type G1P-based membrane lipids found in Bacillales.


ensembl_gene_id: SAMN05421781_2578
symbol: ligA
gene_biotype: protein_coding
description:
  DNA ligase (NAD+); DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA; Belongs to the NAD-dependent DNA ligase family. LigA subfamily.


ensembl_gene_id: SAMN05421781_2580
symbol: gatC
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.


ensembl_gene_id: SAMN05421781_2581
symbol: gatA
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).


ensembl_gene_id: SAMN05421781_2582
symbol: gatB
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily.


ensembl_gene_id: SAMN05421781_2594
symbol: SDW86549.1
gene_biotype: protein_coding
description:
  23S rRNA m(5)U-1939 methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.


ensembl_gene_id: SAMN05421781_2617
symbol: tagH
gene_biotype: protein_coding
description:
  Teichoic acid transport system ATP-binding protein; Part of the ABC transporter complex TagGH involved in teichoic acids export. Responsible for energy coupling to the transport system.


ensembl_gene_id: SAMN05421781_2631
symbol: metE
gene_biotype: protein_coding
description:
  Methionine synthase (B12-independent); Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family.


ensembl_gene_id: SAMN05421781_2675
symbol: SDW88426.1
gene_biotype: protein_coding
description:
  PTS system trehalose-specific IIB component, Glc family /PTS system trehalose-specific IIC component, Glc family.


ensembl_gene_id: SAMN05421781_2679
symbol: cysH
gene_biotype: protein_coding
description:
  Phosphoadenylylsulfate reductase (thioredoxin); Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.


ensembl_gene_id: SAMN05421781_2684
symbol: SDW88609.1
gene_biotype: protein_coding
description:
  uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase/precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase.


ensembl_gene_id: SAMN05421781_2688
symbol: SDW88692.1
gene_biotype: protein_coding
description:
  Ribonuclease HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase H family.


ensembl_gene_id: SAMN05421781_2691
symbol: msrA-4
gene_biotype: protein_coding
description:
  Peptide-methionine (S)-S-oxide reductase/peptide methionine sulfoxide reductase msrA/msrB; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.


ensembl_gene_id: SAMN05421781_2706
symbol: corA
gene_biotype: protein_coding
description:
  Magnesium transporter; Mediates influx of magnesium ions. Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.


ensembl_gene_id: SAMN05421781_2708
symbol: ectC
gene_biotype: protein_coding
description:
  Ectoine synthase; Catalyzes the circularization of gamma-N-acetyl-alpha,gamma- diaminobutyric acid (ADABA) to ectoine (1,4,5,6-tetrahydro-2-methyl-4- pyrimidine carboxylic acid), which is an excellent osmoprotectant.


ensembl_gene_id: SAMN05421781_2709
symbol: SDW89141.1
gene_biotype: protein_coding
description:
  Diaminobutyrate aminotransferase apoenzyme; Catalyzes reversively the conversion of L-aspartate beta- semialdehyde (ASA) to L-2,4-diaminobutyrate (DABA) by transamination with L-glutamate; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: SAMN05421781_2710
symbol: ectA
gene_biotype: protein_coding
description:
  Diaminobutyrate acetyltransferase; Catalyzes the acetylation of L-2,4-diaminobutyrate (DABA) to gamma-N-acetyl-alpha,gamma-diaminobutyric acid (ADABA) with acetyl coenzyme A.


ensembl_gene_id: SAMN05421781_2727
symbol: SDW89581.1
gene_biotype: protein_coding
description:
  Fur family transcriptional regulator, peroxide stress response regulator; Belongs to the Fur family.


ensembl_gene_id: SAMN05421781_2733
symbol: SDW92014.1
gene_biotype: protein_coding
description:
  Conserved hypothetical protein, cofD-related; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family.


ensembl_gene_id: SAMN05421781_2736
symbol: clpP
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease proteolytic subunit ClpP; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: SAMN05421781_2739
symbol: SDW92158.1
gene_biotype: protein_coding
description:
  Glyceraldehyde-3-phosphate dehydrogenase (NAD+); Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: SAMN05421781_2741
symbol: tpiA
gene_biotype: protein_coding
description:
  Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.


ensembl_gene_id: SAMN05421781_2742
symbol: gpmI
gene_biotype: protein_coding
description:
  Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the BPG-independent phosphoglycerate mutase family.


ensembl_gene_id: SAMN05421781_2743
symbol: eno
gene_biotype: protein_coding
description:
  Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.


ensembl_gene_id: SAMN05421781_2744
symbol: SDW92248.1
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.


ensembl_gene_id: SAMN05421781_2747
symbol: rnr
gene_biotype: protein_coding
description:
  RNAse R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.


ensembl_gene_id: SAMN05421781_2748
symbol: smpB
gene_biotype: protein_coding
description:
  SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...]


ensembl_gene_id: SAMN05421781_2750
symbol: zupT
gene_biotype: protein_coding
description:
  Zinc transporter, ZIP family; Mediates zinc uptake. May also transport other divalent cations; Belongs to the ZIP transporter (TC 2.A.5) family. ZupT subfamily.


ensembl_gene_id: SAMN05421781_2761
symbol: SDW92596.1
gene_biotype: protein_coding
description:
  Ribonucleoside-diphosphate reductase class Ib alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.


ensembl_gene_id: SAMN05421781_2762
symbol: SDW92625.1
gene_biotype: protein_coding
description:
  Ribonucleoside-diphosphate reductase class Ib beta subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family.


ensembl_gene_id: SAMN05421781_2764
symbol: SDW92668.1
gene_biotype: protein_coding
description:
  Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family.


ensembl_gene_id: SAMN05421781_2767
symbol: bdbC
gene_biotype: protein_coding
description:
  Disulfide bond formation protein DsbB; Required for disulfide bond formation in some proteins. Belongs to the DsbB family. BdbC subfamily.


ensembl_gene_id: SAMN05421781_2773
symbol: gcvH
gene_biotype: protein_coding
description:
  Glycine cleavage system H protein; Is also involved in protein lipoylation via its role as an octanoyl/lipoyl carrier protein intermediate; Belongs to the GcvH family.


ensembl_gene_id: SAMN05421781_2774
symbol: metN
gene_biotype: protein_coding
description:
  D-methionine transport system ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.


ensembl_gene_id: SAMN05421781_2779
symbol: SDW92995.1
gene_biotype: protein_coding
description:
  Cysteine desulfurase / selenocysteine lyase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.


ensembl_gene_id: SAMN05421781_2783
symbol: SDW93077.1
gene_biotype: protein_coding
description:
  2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'-or 3'-nucleotidase, 5'-nucleotidase family; Belongs to the 5'-nucleotidase family.


ensembl_gene_id: SAMN05421781_2784
symbol: thyA
gene_biotype: protein_coding
description:
  Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis.


ensembl_gene_id: SAMN05421781_2785
symbol: SDW93112.1
gene_biotype: protein_coding
description:
  Dihydrofolate reductase; Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis.


ensembl_gene_id: SAMN05421781_2788
symbol: lipA
gene_biotype: protein_coding
description:
  Lipoic acid synthetase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.


ensembl_gene_id: SAMN05421781_2792
symbol: SDW93243.1
gene_biotype: protein_coding
description:
  4-nitrophenyl phosphatase; Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro; Belongs to the HAD-like hydrolase superfamily. NagD family.


ensembl_gene_id: SAMN05421781_2794
symbol: SDW93288.1
gene_biotype: protein_coding
description:
  L-threonine synthase; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine.


ensembl_gene_id: SAMN05421781_2795
symbol: thrB
gene_biotype: protein_coding
description:
  Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily.


ensembl_gene_id: SAMN05421781_2802
symbol: dapF
gene_biotype: protein_coding
description:
  Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.


ensembl_gene_id: SAMN05421781_2803
symbol: mqnE
gene_biotype: protein_coding
description:
  Aminodeoxyfutalosine synthase; Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3-[(1-carboxyvinyl)oxy]benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate.


ensembl_gene_id: SAMN05421781_2813
symbol: luxS
gene_biotype: protein_coding
description:
  S-ribosylhomocysteine lyase /quorum-sensing autoinducer 2 (AI-2) synthesis protein LuxS; Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5-dihydroxy-2,3-pentadione (DPD). Belongs to the LuxS family.


ensembl_gene_id: SAMN05421781_2827
symbol: panB
gene_biotype: protein_coding
description:
  Ketopantoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family.


ensembl_gene_id: SAMN05421781_2828
symbol: panC
gene_biotype: protein_coding
description:
  Pantoate--beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.


ensembl_gene_id: SAMN05421781_2829
symbol: panD
gene_biotype: protein_coding
description:
  L-aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.


ensembl_gene_id: SAMN05421781_2837
symbol: pckA
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate carboxykinase (ATP); Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA.


ensembl_gene_id: SAMN05421781_2839
symbol: metK
gene_biotype: protein_coding
description:
  Methionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.


ensembl_gene_id: SAMN05421781_2840
symbol: SDW94428.1
gene_biotype: protein_coding
description:
  Sodium/proline symporter; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.


ensembl_gene_id: SAMN05421781_2857
symbol: SDW94820.1
gene_biotype: protein_coding
description:
  DinB superfamily protein; Possible metal-dependent hydrolase; Belongs to the metal hydrolase YfiT family.


ensembl_gene_id: SAMN05421781_2903
symbol: SDW95981.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid:cation transporter, LIVCS family; Component of the transport system for branched-chain amino acids.


ensembl_gene_id: SAMN05421781_2924
symbol: SDW96492.1
gene_biotype: protein_coding
description:
  Ribosomal small subunit pseudouridine synthase A; Belongs to the pseudouridine synthase RsuA family.


ensembl_gene_id: SAMN05421781_2928
symbol: SDW96631.1
gene_biotype: protein_coding
description:
  2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family.


ensembl_gene_id: SAMN05421781_2933
symbol: purU
gene_biotype: protein_coding
description:
  Formyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4).


ensembl_gene_id: SAMN05421781_2935
symbol: trmB
gene_biotype: protein_coding
description:
  tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.


ensembl_gene_id: SAMN05421781_2939
symbol: SDW96930.1
gene_biotype: protein_coding
description:
  PTS system D-fructose-specific IIA component (F1P-forming), Frc family /PTS system D-fructose-specific IIB component (F1P-forming), Frc family /PTS system D-fructose-specific IIC component (F1P-forming), Frc family.


ensembl_gene_id: SAMN05421781_2943
symbol: SDW98202.1
gene_biotype: protein_coding
description:
  ATP-binding protein involved in chromosome partitioning; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.


ensembl_gene_id: SAMN05421781_2946
symbol: rplM
gene_biotype: protein_coding
description:
  LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.


ensembl_gene_id: SAMN05421781_2947
symbol: truA
gene_biotype: protein_coding
description:
  tRNA pseudouridine38-40 synthase; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.


ensembl_gene_id: SAMN05421781_2948
symbol: ecfT
gene_biotype: protein_coding
description:
  Energy-coupling factor transport system permease protein; Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.


ensembl_gene_id: SAMN05421781_2949
symbol: ecfA
gene_biotype: protein_coding
description:
  Energy-coupling factor transport system ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.


ensembl_gene_id: SAMN05421781_2952
symbol: rpoA
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: SAMN05421781_2953
symbol: rpsK
gene_biotype: protein_coding
description:
  SSU ribosomal protein S11P; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.


ensembl_gene_id: SAMN05421781_2954
symbol: rpsM
gene_biotype: protein_coding
description:
  SSU ribosomal protein S13P; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.


ensembl_gene_id: SAMN05421781_2955
symbol: rpmJ
gene_biotype: protein_coding
description:
  LSU ribosomal protein L36P; Manually curated; Belongs to the bacterial ribosomal protein bL36 family.


ensembl_gene_id: SAMN05421781_2956
symbol: infA
gene_biotype: protein_coding
description:
  Bacterial translation initiation factor 1 (bIF-1); One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.


ensembl_gene_id: SAMN05421781_2958
symbol: adk
gene_biotype: protein_coding
description:
  Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.


ensembl_gene_id: SAMN05421781_2959
symbol: secY
gene_biotype: protein_coding
description:
  Protein translocase subunit secY/sec61 alpha; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.


ensembl_gene_id: SAMN05421781_2960
symbol: rplO
gene_biotype: protein_coding
description:
  LSU ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.


ensembl_gene_id: SAMN05421781_2962
symbol: rpsE
gene_biotype: protein_coding
description:
  SSU ribosomal protein S5P; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.


ensembl_gene_id: SAMN05421781_2963
symbol: rplR
gene_biotype: protein_coding
description:
  LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.


ensembl_gene_id: SAMN05421781_2964
symbol: rplF
gene_biotype: protein_coding
description:
  LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.


ensembl_gene_id: SAMN05421781_2965
symbol: rpsH
gene_biotype: protein_coding
description:
  SSU ribosomal protein S8P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.


ensembl_gene_id: SAMN05421781_2966
symbol: rplE
gene_biotype: protein_coding
description:
  LSU ribosomal protein L5P; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.


ensembl_gene_id: SAMN05421781_2967
symbol: rplX
gene_biotype: protein_coding
description:
  LSU ribosomal protein L24P; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.


ensembl_gene_id: SAMN05421781_2968
symbol: rplN
gene_biotype: protein_coding
description:
  LSU ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.


ensembl_gene_id: SAMN05421781_2969
symbol: rpsQ
gene_biotype: protein_coding
description:
  SSU ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.


ensembl_gene_id: SAMN05421781_2971
symbol: rplP
gene_biotype: protein_coding
description:
  LSU ribosomal protein L16P; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.


ensembl_gene_id: SAMN05421781_2972
symbol: rpsC
gene_biotype: protein_coding
description:
  SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.


ensembl_gene_id: SAMN05421781_2973
symbol: rplV
gene_biotype: protein_coding
description:
  LSU ribosomal protein L22P; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.


ensembl_gene_id: SAMN05421781_2974
symbol: rpsS
gene_biotype: protein_coding
description:
  SSU ribosomal protein S19P; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.


ensembl_gene_id: SAMN05421781_2975
symbol: rplB
gene_biotype: protein_coding
description:
  LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.


ensembl_gene_id: SAMN05421781_2976
symbol: rplW
gene_biotype: protein_coding
description:
  LSU ribosomal protein L23P; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.


ensembl_gene_id: SAMN05421781_2978
symbol: rplC
gene_biotype: protein_coding
description:
  LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.


ensembl_gene_id: SAMN05421781_2979
symbol: rpsJ
gene_biotype: protein_coding
description:
  SSU ribosomal protein S10P; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.


ensembl_gene_id: SAMN05421781_2980
symbol: tuf
gene_biotype: protein_coding
description:
  Translation elongation factor 1A (EF-1A/EF-Tu); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.


ensembl_gene_id: SAMN05421781_2981
symbol: fusA
gene_biotype: protein_coding
description:
  Translation elongation factor 2 (EF-2/EF-G); Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. [...]


ensembl_gene_id: SAMN05421781_2982
symbol: rpsG
gene_biotype: protein_coding
description:
  SSU ribosomal protein S7P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.


ensembl_gene_id: SAMN05421781_2983
symbol: rpsL
gene_biotype: protein_coding
description:
  SSU ribosomal protein S12P; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.


ensembl_gene_id: SAMN05421781_2985
symbol: rpoC
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: SAMN05421781_2988
symbol: rplL
gene_biotype: protein_coding
description:
  LSU ribosomal protein L12P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.


ensembl_gene_id: SAMN05421781_2989
symbol: rplJ
gene_biotype: protein_coding
description:
  LSU ribosomal protein L10P; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.


ensembl_gene_id: SAMN05421781_2990
symbol: rplA
gene_biotype: protein_coding
description:
  LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.


ensembl_gene_id: SAMN05421781_2991
symbol: rplK
gene_biotype: protein_coding
description:
  LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.


ensembl_gene_id: SAMN05421781_2992
symbol: nusG
gene_biotype: protein_coding
description:
  Transcription antitermination protein nusG; Participates in transcription elongation, termination and antitermination.


ensembl_gene_id: SAMN05421781_2993
symbol: secE
gene_biotype: protein_coding
description:
  Protein translocase subunit secE/sec61 gamma; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.


ensembl_gene_id: SAMN05421781_2998
symbol: SDW99487.1
gene_biotype: protein_coding
description:
  23S rRNA (guanosine2251-2'-O)-methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: SAMN05421781_2999
symbol: mrnC
gene_biotype: protein_coding
description:
  Ribonuclease-3 family protein; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family.


ensembl_gene_id: SAMN05421781_3002
symbol: gltX
gene_biotype: protein_coding
description:
  glutamyl-tRNA synthetase /glutamate--tRNA(Gln) ligase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.


ensembl_gene_id: SAMN05421781_3003
symbol: ispF
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP).


ensembl_gene_id: SAMN05421781_3004
symbol: ispD
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP).


ensembl_gene_id: SAMN05421781_3006
symbol: radA
gene_biotype: protein_coding
description:
  DNA repair protein RadA/Sms; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.


ensembl_gene_id: SAMN05421781_3008
symbol: mcsB
gene_biotype: protein_coding
description:
  Protein arginine kinase; Catalyzes the specific phosphorylation of arginine residues in a large number of proteins. Is part of the bacterial stress response system. Protein arginine phosphorylation has a physiologically important role and is involved in the regulation of many critical cellular processes, such as protein homeostasis, motility, competence, and stringent and stress responses, by regulating gene expression and protein activity; Belongs to the ATP:guanido phosphotransferase family.


ensembl_gene_id: SAMN05421781_3024
symbol: groL
gene_biotype: protein_coding
description:
  Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.


ensembl_gene_id: SAMN05421781_3025
symbol: groS
gene_biotype: protein_coding
description:
  Chaperonin GroES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.


ensembl_gene_id: SAMN05421781_3028
symbol: rex
gene_biotype: protein_coding
description:
  Redox-sensing transcriptional repressor; Modulates transcription in response to changes in cellular NADH/NAD(+) redox state.


ensembl_gene_id: SAMN05421781_3030
symbol: tsaD
gene_biotype: protein_coding
description:
  O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.


ensembl_gene_id: SAMN05421781_3031
symbol: SDX00817.1
gene_biotype: protein_coding
description:
  [SSU ribosomal protein S18P]-alanine acetyltransferase; Acetylates the N-terminal alanine of ribosomal protein S18.


ensembl_gene_id: SAMN05421781_3034
symbol: thiL
gene_biotype: protein_coding
description:
  Thiamine-phosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family.


ensembl_gene_id: SAMN05421781_3038
symbol: pxpA
gene_biotype: protein_coding
description:
  UPF0271 protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.


# pathwayInfo

id: CL:1036
description: beta-Alanine metabolism, and Allantoinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1036_beta-Alanine_metabolism,_and_Allantoinase_activity


id: CL:1050
description: Purine ribonucleoside monophosphate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1050_Purine_ribonucleoside_monophosphate_metabolic_process


id: CL:1077
description: GMP metabolic process, and AMP salvage
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1077_GMP_metabolic_process,_and_AMP_salvage


id: CL:1100
description: Purine nucleobase metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1100_Purine_nucleobase_metabolic_process


id: CL:1102
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1102_Microbody,_and_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_cyclic_amides

description:
  Microbody, and Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides


id: CL:1128
description: Pyrimidine metabolism, and NUDIX domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1128_Pyrimidine_metabolism,_and_NUDIX_domain


id: CL:113
description: Citrate synthase, and ICL/PEPM domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:113_Citrate_synthase,_and_ICL/PEPM_domain


id: CL:1130
description: Mixed, incl. Glycosyltransferase, and Deoxyribonucleotide catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1130_Mixed,_incl._Glycosyltransferase,_and_Deoxyribonucleotide_catabolic_process


id: CL:1132
description: Mixed, incl. Purine nucleoside phosphorylase, and Pyrimidine nucleoside metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1132_Mixed,_incl._Purine_nucleoside_phosphorylase,_and_Pyrimidine_nucleoside_metabolic_process


id: CL:1159
description: Deoxyribonucleoside monophosphate metabolic process, and dTDP metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1159_Deoxyribonucleoside_monophosphate_metabolic_process,_and_dTDP_metabolic_process


id: CL:1175
description: Mixed, incl. Riboflavin metabolic process, and RNA repair
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1175_Mixed,_incl._Riboflavin_metabolic_process,_and_RNA_repair


id: CL:1176
description: Riboflavin metabolic process, and NADH:flavin oxidoreductase / NADH oxidase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1176_Riboflavin_metabolic_process,_and_NADH:flavin_oxidoreductase_/_NADH_oxidase_family


id: CL:1182
description: Riboflavin biosynthesis, and ATP synthase subunit alpha, N-terminal domain-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1182_Riboflavin_biosynthesis,_and_ATP_synthase_subunit_alpha,_N-terminal_domain-like_superfamily


id: CL:1207
description: Mixed, incl. RNA repair, and tRNA synthetases class I (W and Y)
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1207_Mixed,_incl._RNA_repair,_and_tRNA_synthetases_class_I_(W_and_Y)


id: CL:1219
description: Mixed, incl. Aldo/keto reductase family, and Met-10+ like-protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1219_Mixed,_incl._Aldo/keto_reductase_family,_and_Met-10+_like-protein


id: CL:122
description: acetyl-CoA biosynthetic process, and Glyoxylate cycle
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:122_acetyl-CoA_biosynthetic_process,_and_Glyoxylate_cycle


id: CL:1220
description: Aldo/keto reductase family, and Uracil-DNA glycosylase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1220_Aldo/keto_reductase_family,_and_Uracil-DNA_glycosylase-like


id: CL:1243
description: Mixed, incl. Met-10+ like-protein, and D-gluconate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1243_Mixed,_incl._Met-10+_like-protein,_and_D-gluconate_metabolic_process


id: CL:1260
description: Mixed, incl. Acyl-CoA reductase (LuxC), and L-arabinose isomerase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1260_Mixed,_incl._Acyl-CoA_reductase_(LuxC),_and_L-arabinose_isomerase_activity


id: CL:1278
description: Mixed, incl. Cysteine-rich domain, and Glycolate oxidase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1278_Mixed,_incl._Cysteine-rich_domain,_and_Glycolate_oxidase_complex


id: CL:1280
description: Mixed, incl. Cysteine-rich domain, and Glycolate oxidase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1280_Mixed,_incl._Cysteine-rich_domain,_and_Glycolate_oxidase_complex


id: CL:1282
description: Mixed, incl. Dipeptidase activity, and Cysteine-rich domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1282_Mixed,_incl._Dipeptidase_activity,_and_Cysteine-rich_domain


id: CL:1294
description: Mixed, incl. Cysteine-rich domain, and Glycolate oxidase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1294_Mixed,_incl._Cysteine-rich_domain,_and_Glycolate_oxidase_complex


id: CL:1325
description: Mixed, incl. Translation, and Protein localization
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1325_Mixed,_incl._Translation,_and_Protein_localization


id: CL:1326
description: Mixed, incl. Translation, and Protein localization
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1326_Mixed,_incl._Translation,_and_Protein_localization


id: CL:1328
description: Translation, and Protein localization
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1328_Translation,_and_Protein_localization


id: CL:1329
description: Translation, and Protein transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1329_Translation,_and_Protein_transport


id: CL:1330
description: Translation, and Protein transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1330_Translation,_and_Protein_transport


id: CL:1331
description: Translation, and Protein transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1331_Translation,_and_Protein_transport


id: CL:1332
description: Mixed, incl. Ribosome, and Protein transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1332_Mixed,_incl._Ribosome,_and_Protein_transport


id: CL:1333
description: Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1333_Ribosome,_and_Translation_regulator_activity


id: CL:1334
description: Ribosome, and Proton-transporting ATP synthase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1334_Ribosome,_and_Proton-transporting_ATP_synthase_complex


id: CL:1335
description: Ribosome, and Proton-transporting ATP synthase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1335_Ribosome,_and_Proton-transporting_ATP_synthase_complex


id: CL:1337
description: Ribosome, and Translational elongation
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1337_Ribosome,_and_Translational_elongation


id: CL:134
description: Thiamin diphosphate-binding fold, and e3 binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:134_Thiamin_diphosphate-binding_fold,_and_e3_binding_domain


id: CL:1346
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1346_Structural_constituent_of_ribosome


id: CL:1349
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1349_Structural_constituent_of_ribosome


id: CL:1350
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1350_Structural_constituent_of_ribosome


id: CL:1356
description: Large ribosomal subunit, and rRNA-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1356_Large_ribosomal_subunit,_and_rRNA-binding


id: CL:1357
description: Large ribosomal subunit, and tRNA-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1357_Large_ribosomal_subunit,_and_tRNA-binding


id: CL:1371
description: Large ribosomal subunit, and Nucleotide-binding alpha-beta plait domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1371_Large_ribosomal_subunit,_and_Nucleotide-binding_alpha-beta_plait_domain_superfamily


id: CL:1389
description: Mixed, incl. Small ribosomal subunit, and K Homology domain, type 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1389_Mixed,_incl._Small_ribosomal_subunit,_and_K_Homology_domain,_type_2


id: CL:1414
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1414_Structural_constituent_of_ribosome


id: CL:1416
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1416_Structural_constituent_of_ribosome


id: CL:1418
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1418_Structural_constituent_of_ribosome


id: CL:1432
description: Large ribosomal subunit rRNA binding, and Elongation factor G C-terminus
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1432_Large_ribosomal_subunit_rRNA_binding,_and_Elongation_factor_G_C-terminus


id: CL:1451
description: L28p-like, and Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1451_L28p-like,_and_Structural_constituent_of_ribosome


id: CL:1514
description: Mixed, incl. Ribosomal small subunit biogenesis, and tRNA pseudouridine synthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1514_Mixed,_incl._Ribosomal_small_subunit_biogenesis,_and_tRNA_pseudouridine_synthesis


id: CL:1517
description: Mixed, incl. Ribosomal protein L7Ae/L30e/S12e/Gadd45, and Initiation factor
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1517_Mixed,_incl._Ribosomal_protein_L7Ae/L30e/S12e/Gadd45,_and_Initiation_factor


id: CL:1532
description: Mixed, incl. De novo CTP biosynthetic process, and Translational termination
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1532_Mixed,_incl._De_novo_CTP_biosynthetic_process,_and_Translational_termination


id: CL:1541
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1541_Mixed,_incl._Ribosome_binding,_and_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_oxygen_as_acceptor

description:
  Mixed, incl. Ribosome binding, and Oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor


id: CL:156
description: Mixed, incl. Dehydrogenase E1 component, and Dihydrolipoamide dehydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:156_Mixed,_incl._Dehydrogenase_E1_component,_and_Dihydrolipoamide_dehydrogenase


id: CL:1579
description: Anticodon-binding domain of tRNA ligase, and tRNA synthetases class II (D, K and N)
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1579_Anticodon-binding_domain_of_tRNA_ligase,_and_tRNA_synthetases_class_II_(D,_K_and_N)


id: CL:1606
description: RNA polymerase activity, and ArsC family
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1606_RNA_polymerase_activity,_and_ArsC_family


id: CL:1609
description: RNA polymerase, and Sigma-70 region 3
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1609_RNA_polymerase,_and_Sigma-70_region_3


id: CL:1626
description: RNA helicase activity, and RNA 2-O ribose methyltransferase substrate binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1626_RNA_helicase_activity,_and_RNA_2-O_ribose_methyltransferase_substrate_binding


id: CL:1639
description: Mixed, incl. S1 domain, and tRNA 3-trailer cleavage
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1639_Mixed,_incl._S1_domain,_and_tRNA_3-trailer_cleavage


id: CL:1667
description: Mixed, incl. Peptidase S26, and Alpha-D-phosphohexomutase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1667_Mixed,_incl._Peptidase_S26,_and_Alpha-D-phosphohexomutase_superfamily


id: CL:1676
description: Mixed, incl. Chaperone, and Proteolysis involved in protein catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1676_Mixed,_incl._Chaperone,_and_Proteolysis_involved_in_protein_catabolic_process


id: CL:1677
description: Mixed, incl. Chaperone, and Proteolysis involved in protein catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1677_Mixed,_incl._Chaperone,_and_Proteolysis_involved_in_protein_catabolic_process


id: CL:1679
description: Unfolded protein binding, and Stress response
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1679_Unfolded_protein_binding,_and_Stress_response


id: CL:168
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:168_Mixed,_incl._Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_and_Proline_biosynthesis

description:
  Mixed, incl. Oxidoreductase activity, acting on the CH-NH2 group of donors, and Proline biosynthesis


id: CL:1682
description: Protein folding chaperone, and Stress response
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1682_Protein_folding_chaperone,_and_Stress_response


id: CL:169
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, and Proline biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:169_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_and_Proline_biosynthesis


id: CL:1705
description: Peptidase complex, and DNA integration
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1705_Peptidase_complex,_and_DNA_integration


id: CL:171
description: Oxidoreductase activity, acting on the CH-NH2 group of donors
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:171_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors


id: CL:1725
description: Mixed, incl. Catalytic activity, acting on DNA, and Catalytic activity, acting on a tRNA
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1725_Mixed,_incl._Catalytic_activity,_acting_on_DNA,_and_Catalytic_activity,_acting_on_a_tRNA


id: CL:1726
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1726_Mixed,_incl._Catalytic_activity,_acting_on_DNA,_and_glutaminyl-tRNA_synthase_(glutamine-hydrolyzing)_activity

description:
  Mixed, incl. Catalytic activity, acting on DNA, and glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity


id: CL:1727
description: Catalytic activity, acting on DNA, and glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1727_Catalytic_activity,_acting_on_DNA,_and_glutaminyl-tRNA_synthase_(glutamine-hydrolyzing)_activity


id: CL:1728
description: Catalytic activity, acting on DNA, and glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1728_Catalytic_activity,_acting_on_DNA,_and_glutaminyl-tRNA_synthase_(glutamine-hydrolyzing)_activity


id: CL:1729
description: Mismatch repair, and SOS response
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1729_Mismatch_repair,_and_SOS_response


id: CL:1730
description: Mixed, incl. DNA polymerase activity, and SOS response
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1730_Mixed,_incl._DNA_polymerase_activity,_and_SOS_response


id: CL:1732
description: DNA polymerase activity, and DNA damage sensor activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1732_DNA_polymerase_activity,_and_DNA_damage_sensor_activity


id: CL:1734
description: Mismatched DNA binding, and DNA polymerase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1734_Mismatched_DNA_binding,_and_DNA_polymerase_activity


id: CL:1763
description: DNA polymerase complex, and Ribonuclease H domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1763_DNA_polymerase_complex,_and_Ribonuclease_H_domain


id: CL:1777
description: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity, and UvrD-like helicase C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1777_glutaminyl-tRNA_synthase_(glutamine-hydrolyzing)_activity,_and_UvrD-like_helicase_C-terminal_domain


id: CL:1789
description: Double-strand break repair via homologous recombination, and Exodeoxyribonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1789_Double-strand_break_repair_via_homologous_recombination,_and_Exodeoxyribonuclease_activity


id: CL:1803
description: Mixed, incl. Holliday junction helicase complex, and Nucleoside biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1803_Mixed,_incl._Holliday_junction_helicase_complex,_and_Nucleoside_biosynthetic_process


id: CL:1804
description: Mixed, incl. RelA/SpoT, and AMP salvage
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1804_Mixed,_incl._RelA/SpoT,_and_AMP_salvage


id: CL:1813
description: Holliday junction helicase complex, and Queuosine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1813_Holliday_junction_helicase_complex,_and_Queuosine_biosynthesis


id: CL:1823
description: Mixed, incl. ParB/Sulfiredoxin, and AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1823_Mixed,_incl._ParB/Sulfiredoxin,_and_AAA_domain


id: CL:1839
description: Mixed, incl. TPR repeat, and RNA capping
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1839_Mixed,_incl._TPR_repeat,_and_RNA_capping


id: CL:1841
description: TPR repeat, and Acylphosphatase, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1841_TPR_repeat,_and_Acylphosphatase,_conserved_site


id: CL:1853
description: Mixed, incl. RNA capping, and Lytic transglycosylase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1853_Mixed,_incl._RNA_capping,_and_Lytic_transglycosylase_activity


id: CL:1862
description: Mixed, incl. Isoprene biosynthesis, and rRNA modification
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1862_Mixed,_incl._Isoprene_biosynthesis,_and_rRNA_modification


id: CL:1863
description: Mixed, incl. Isoprene biosynthesis, and DNA catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1863_Mixed,_incl._Isoprene_biosynthesis,_and_DNA_catabolic_process


id: CL:1864
description: Isoprene biosynthesis, and Protein complex oligomerization
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1864_Isoprene_biosynthesis,_and_Protein_complex_oligomerization


id: CL:1866
description: Isopentenyl diphosphate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1866_Isopentenyl_diphosphate_metabolic_process


id: CL:1880
description: Mixed, incl. Transketolase, N-terminal, and Protein complex oligomerization
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1880_Mixed,_incl._Transketolase,_N-terminal,_and_Protein_complex_oligomerization


id: CL:189
description: Mixed, incl. MerR-type HTH domain, and Biotin
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:189_Mixed,_incl._MerR-type_HTH_domain,_and_Biotin


id: CL:1891
description: DNA catabolic process, and NusB family
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1891_DNA_catabolic_process,_and_NusB_family


id: CL:1904
description: Mixed, incl. rRNA modification, and Chromosome segregation
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1904_Mixed,_incl._rRNA_modification,_and_Chromosome_segregation


id: CL:1905
description: Mixed, incl. rRNA methyltransferase activity, and Cobalt
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1905_Mixed,_incl._rRNA_methyltransferase_activity,_and_Cobalt


id: CL:1908
description: rRNA methyltransferase activity, and Response to bacterium
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1908_rRNA_methyltransferase_activity,_and_Response_to_bacterium


id: CL:1925
description: Mixed, incl. Chromosome partition, and Chromosome condensation
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1925_Mixed,_incl._Chromosome_partition,_and_Chromosome_condensation


id: CL:1947
description: Mixed, incl. glycyl-tRNA aminoacylation, and K Homology domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1947_Mixed,_incl._glycyl-tRNA_aminoacylation,_and_K_Homology_domain


id: CL:1949
description: K Homology domain, and Bacterial nucleoid
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1949_K_Homology_domain,_and_Bacterial_nucleoid


id: CL:1966
description: glycyl-tRNA aminoacylation, and Response to nutrient
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1966_glycyl-tRNA_aminoacylation,_and_Response_to_nutrient


id: CL:1985
description: Mixed, incl. Threonine/Serine exporter, ThrE, and rRNA processing
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1985_Mixed,_incl._Threonine/Serine_exporter,_ThrE,_and_rRNA_processing


id: CL:1987
description: Mixed, incl. RutC-like superfamily, and rRNA (adenine) methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:1987_Mixed,_incl._RutC-like_superfamily,_and_rRNA_(adenine)_methyltransferase_activity


id: CL:2006
description: Mixed, incl. UTP metabolic process, and UvrB, interaction domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2006_Mixed,_incl._UTP_metabolic_process,_and_UvrB,_interaction_domain


id: CL:2019
description: DNA topoisomerase, type IIA-like domain superfamily, and RecF/RecN/SMC, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2019_DNA_topoisomerase,_type_IIA-like_domain_superfamily,_and_RecF/RecN/SMC,_N-terminal


id: CL:2034
description: Type 1 protein exporter, and GIY-YIG endonuclease
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2034_Type_1_protein_exporter,_and_GIY-YIG_endonuclease


id: CL:2048
description: Mixed, incl. Peptidoglycan biosynthesis, and PGBD superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2048_Mixed,_incl._Peptidoglycan_biosynthesis,_and_PGBD_superfamily


id: CL:2049
description: Mixed, incl. Peptidoglycan biosynthesis, and PGBD superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2049_Mixed,_incl._Peptidoglycan_biosynthesis,_and_PGBD_superfamily


id: CL:2050
description: Mixed, incl. Peptidoglycan biosynthesis, and Cell division site
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2050_Mixed,_incl._Peptidoglycan_biosynthesis,_and_Cell_division_site


id: CL:2051
description: Mixed, incl. Peptidoglycan biosynthesis, and Cell division site
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2051_Mixed,_incl._Peptidoglycan_biosynthesis,_and_Cell_division_site


id: CL:2052
description: Peptidoglycan biosynthesis, and Cell division site
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2052_Peptidoglycan_biosynthesis,_and_Cell_division_site


id: CL:2059
description: Mur ligase, C-terminal, and Glycosyl transferase family 4
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2059_Mur_ligase,_C-terminal,_and_Glycosyl_transferase_family_4


id: CL:2074
description: Penicillin-binding protein, transpeptidase, and Cell cycle protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2074_Penicillin-binding_protein,_transpeptidase,_and_Cell_cycle_protein


id: CL:2096
description: Mixed, incl. Reproduction, and RNA-binding S4 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2096_Mixed,_incl._Reproduction,_and_RNA-binding_S4_domain


id: CL:2098
description: Mixed, incl. Thylakoid, and DivIVA family
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2098_Mixed,_incl._Thylakoid,_and_DivIVA_family


id: CL:211
description: Glycine metabolic process, and RibD C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:211_Glycine_metabolic_process,_and_RibD_C-terminal_domain


id: CL:2117
description: Mixed, incl. Septum formation initiator, and rRNA (cytosine) methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2117_Mixed,_incl._Septum_formation_initiator,_and_rRNA_(cytosine)_methyltransferase_activity


id: CL:2131
description: Cell morphogenesis, and Negative regulation of cell division
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2131_Cell_morphogenesis,_and_Negative_regulation_of_cell_division


id: CL:2143
description: PGBD superfamily, and Fibronectin type III-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2143_PGBD_superfamily,_and_Fibronectin_type_III-like_domain


id: CL:2145
description: PGBD superfamily, and Carboxypeptidase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2145_PGBD_superfamily,_and_Carboxypeptidase


id: CL:2148
description: N-acetylmuramoyl-L-alanine amidase activity, and NlpC/P60 family
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2148_N-acetylmuramoyl-L-alanine_amidase_activity,_and_NlpC/P60_family


id: CL:2151
description: Carboxypeptidase, and LysM domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2151_Carboxypeptidase,_and_LysM_domain


id: CL:2184
description: Mixed, incl. tRNA threonylcarbamoyladenosine modification, and Alanine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2184_Mixed,_incl._tRNA_threonylcarbamoyladenosine_modification,_and_Alanine_metabolic_process


id: CL:2185
description: Mixed, incl. tRNA threonylcarbamoyladenosine modification, and Alanine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2185_Mixed,_incl._tRNA_threonylcarbamoyladenosine_modification,_and_Alanine_metabolic_process


id: CL:2187
description: tRNA threonylcarbamoyladenosine modification, and PurM-like, N-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2187_tRNA_threonylcarbamoyladenosine_modification,_and_PurM-like,_N-terminal_domain


id: CL:2206
description: Mixed, incl. Coenzyme A metabolic process, and MutM-like, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2206_Mixed,_incl._Coenzyme_A_metabolic_process,_and_MutM-like,_N-terminal


id: CL:2221
description: Mixed, incl. Horizontal gene transfer, and Antiporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2221_Mixed,_incl._Horizontal_gene_transfer,_and_Antiporter_activity


id: CL:2223
description: Horizontal gene transfer, and Helix-hairpin-helix DNA-binding motif, class 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2223_Horizontal_gene_transfer,_and_Helix-hairpin-helix_DNA-binding_motif,_class_1


id: CL:2226
description: Pilin-like, and Type II/IV secretion system protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2226_Pilin-like,_and_Type_II/IV_secretion_system_protein


id: CL:2253
description: Antiporter activity, and Ribosome assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2253_Antiporter_activity,_and_Ribosome_assembly


id: CL:2256
description: Ribosome assembly, and NAD biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2256_Ribosome_assembly,_and_NAD_biosynthetic_process


id: CL:2268
description: Cation:cation antiporter activity, and Antiporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2268_Cation:cation_antiporter_activity,_and_Antiporter_activity


id: CL:2280
description: Mixed, incl. Glycerol metabolic process, and LytR_cpsA_psr family
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2280_Mixed,_incl._Glycerol_metabolic_process,_and_LytR_cpsA_psr_family


id: CL:2281
description: Mostly uncharacterized, incl. DegV, and DhaL domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2281_Mostly_uncharacterized,_incl._DegV,_and_DhaL_domain


id: CL:2283
description: Mixed, incl. Helix-hairpin-helix motif, and Cytidylyltransferase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2283_Mixed,_incl._Helix-hairpin-helix_motif,_and_Cytidylyltransferase-like


id: CL:2313
description: Mixed, incl. Regulation of catabolic process, and NUDIX hydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2313_Mixed,_incl._Regulation_of_catabolic_process,_and_NUDIX_hydrolase


id: CL:2329
description: Mixed, incl. Cell inner membrane, and Protein splicing
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2329_Mixed,_incl._Cell_inner_membrane,_and_Protein_splicing


id: CL:2332
description: Mixed, incl. Protein splicing, and Asp/Glu racemase, active site 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2332_Mixed,_incl._Protein_splicing,_and_Asp/Glu_racemase,_active_site_1


id: CL:2350
description: Mixed, incl. Oxidoreductase activity, and Sulfur relay system
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2350_Mixed,_incl._Oxidoreductase_activity,_and_Sulfur_relay_system


id: CL:2351
description: Mixed, incl. Porphyrin-containing compound biosynthetic process, and Sulfur relay system
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2351_Mixed,_incl._Porphyrin-containing_compound_biosynthetic_process,_and_Sulfur_relay_system


id: CL:2352
description: Mixed, incl. Sulfur relay system, and Iron-sulfur cluster assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2352_Mixed,_incl._Sulfur_relay_system,_and_Iron-sulfur_cluster_assembly


id: CL:2353
description: Mixed, incl. Iron-sulfur cluster assembly, and Rhodanese-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2353_Mixed,_incl._Iron-sulfur_cluster_assembly,_and_Rhodanese-like_domain


id: CL:2354
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2354_Mixed,_incl._Rhodanese-like_domain,_and_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_quinone_or_similar_compound_as_acceptor

description:
  Mixed, incl. Rhodanese-like domain, and Oxidoreductase activity, acting on a sulfur group of donors, quinone or similar compound as acceptor


id: CL:2355
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2355_Mixed,_incl._Rhodanese-like_domain,_and_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_quinone_or_similar_compound_as_acceptor

description:
  Mixed, incl. Rhodanese-like domain, and Oxidoreductase activity, acting on a sulfur group of donors, quinone or similar compound as acceptor


id: CL:2358
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2358_Rhodanese-like_domain,_and_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_quinone_or_similar_compound_as_acceptor

description:
  Rhodanese-like domain, and Oxidoreductase activity, acting on a sulfur group of donors, quinone or similar compound as acceptor


id: CL:237
description: Lipoate metabolic process, and Protein deacylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:237_Lipoate_metabolic_process,_and_Protein_deacylation


id: CL:2379
description: Mixed, incl. tRNA thio-modification, and Fluoride transmembrane transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2379_Mixed,_incl._tRNA_thio-modification,_and_Fluoride_transmembrane_transport


id: CL:2398
description: Iron-sulfur cluster assembly, and THUMP domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2398_Iron-sulfur_cluster_assembly,_and_THUMP_domain


id: CL:2401
description: SUF system FeS cluster assembly, SufBD, and Cysteine desulfurase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2401_SUF_system_FeS_cluster_assembly,_SufBD,_and_Cysteine_desulfurase


id: CL:2412
description: Mixed, incl. [2Fe-2S] cluster assembly, and THUMP domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2412_Mixed,_incl._[2Fe-2S]_cluster_assembly,_and_THUMP_domain


id: CL:2427
description: Mixed, incl. Prosthetic group metabolic process, and Amidohydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2427_Mixed,_incl._Prosthetic_group_metabolic_process,_and_Amidohydrolase


id: CL:2428
description: Prosthetic group metabolic process, and Molybdate ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2428_Prosthetic_group_metabolic_process,_and_Molybdate_ion_transport


id: CL:2429
description: Prosthetic group metabolic process, and Molybdate ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2429_Prosthetic_group_metabolic_process,_and_Molybdate_ion_transport


id: CL:2433
description: Prosthetic group metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2433_Prosthetic_group_metabolic_process


id: CL:2450
description: Mixed, incl. Molybdopterin oxidoreductase, and Sulfur carrier activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2450_Mixed,_incl._Molybdopterin_oxidoreductase,_and_Sulfur_carrier_activity


id: CL:2462
description: Mixed, incl. Amidohydrolase, and Dioxygenase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2462_Mixed,_incl._Amidohydrolase,_and_Dioxygenase


id: CL:2487
description: Porphyrin-containing compound biosynthetic process, and Sulfate assimilation
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2487_Porphyrin-containing_compound_biosynthetic_process,_and_Sulfate_assimilation


id: CL:2488
description: Heme biosynthetic process, and Sulfate assimilation
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2488_Heme_biosynthetic_process,_and_Sulfate_assimilation


id: CL:2490
description: Protoporphyrinogen IX metabolic process, and uroporphyrinogen-III synthase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2490_Protoporphyrinogen_IX_metabolic_process,_and_uroporphyrinogen-III_synthase_activity


id: CL:250
description: Mixed, incl. Fatty acid metabolic process, and Short-chain dehydrogenase/reductase SDR
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:250_Mixed,_incl._Fatty_acid_metabolic_process,_and_Short-chain_dehydrogenase/reductase_SDR


id: CL:252
description: Mixed, incl. Fatty acid metabolic process, and Short-chain dehydrogenase/reductase SDR
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:252_Mixed,_incl._Fatty_acid_metabolic_process,_and_Short-chain_dehydrogenase/reductase_SDR


id: CL:2535
description: Mixed, incl. Uroporphyrinogen-III synthase, and ABC-transporter extension domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2535_Mixed,_incl._Uroporphyrinogen-III_synthase,_and_ABC-transporter_extension_domain


id: CL:2544
description: Mixed, incl. Response to oxidative stress, and Oxidative phosphorylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2544_Mixed,_incl._Response_to_oxidative_stress,_and_Oxidative_phosphorylation


id: CL:2545
description: Mixed, incl. Response to oxidative stress, and Thioredoxin-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2545_Mixed,_incl._Response_to_oxidative_stress,_and_Thioredoxin-like_superfamily


id: CL:2547
description: Mixed, incl. Response to oxidative stress, and Thioredoxin-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2547_Mixed,_incl._Response_to_oxidative_stress,_and_Thioredoxin-like_superfamily


id: CL:2548
description: Response to oxidative stress, and Cell redox homeostasis
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2548_Response_to_oxidative_stress,_and_Cell_redox_homeostasis


id: CL:2549
description: Response to oxidative stress, and Selenocompound metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2549_Response_to_oxidative_stress,_and_Selenocompound_metabolism


id: CL:255
description: Mixed, incl. Fatty acid metabolic process, and Short-chain dehydrogenase/reductase SDR
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:255_Mixed,_incl._Fatty_acid_metabolic_process,_and_Short-chain_dehydrogenase/reductase_SDR


id: CL:2550
description: Response to oxidative stress, and Thioredoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2550_Response_to_oxidative_stress,_and_Thioredoxin


id: CL:2552
description: Oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor, and Thioredoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2552_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_disulfide_as_acceptor,_and_Thioredoxin


id: CL:256
description: Mixed, incl. Fatty acid metabolism, and Alpha/beta hydrolase fold-1
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:256_Mixed,_incl._Fatty_acid_metabolism,_and_Alpha/beta_hydrolase_fold-1


id: CL:2566
description: Mixed, incl. Hydrogen peroxide, and Glyoxalase III activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2566_Mixed,_incl._Hydrogen_peroxide,_and_Glyoxalase_III_activity


id: CL:257
description: Mixed, incl. Fatty acid metabolism, and Short-chain dehydrogenase/reductase SDR
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:257_Mixed,_incl._Fatty_acid_metabolism,_and_Short-chain_dehydrogenase/reductase_SDR


id: CL:2587
description: Ribonucleoside-diphosphate reductase complex, and Glutathione oxidoreductase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2587_Ribonucleoside-diphosphate_reductase_complex,_and_Glutathione_oxidoreductase_activity


id: CL:259
description: Lipid metabolism, and Lipid oxidation
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:259_Lipid_metabolism,_and_Lipid_oxidation


id: CL:2600
description: Mixed, incl. Redoxin, and L-threonine ammonia-lyase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2600_Mixed,_incl._Redoxin,_and_L-threonine_ammonia-lyase_activity


id: CL:261
description: Fatty acid biosynthesis, and Fatty acid synthase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:261_Fatty_acid_biosynthesis,_and_Fatty_acid_synthase_activity


id: CL:2617
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2617_Mixed,_incl._Response_to_reactive_oxygen_species,_and_Organic_hydroperoxide_resistance_protein_famiy

description:
  Mixed, incl. Response to reactive oxygen species, and Organic hydroperoxide resistance protein famiy


id: CL:2629
description: Mixed, incl. Oxidative phosphorylation, and Alpha/beta hydrolase fold
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2629_Mixed,_incl._Oxidative_phosphorylation,_and_Alpha/beta_hydrolase_fold


id: CL:2630
description: Mixed, incl. Alpha/beta hydrolase fold, and Peptidase M16, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2630_Mixed,_incl._Alpha/beta_hydrolase_fold,_and_Peptidase_M16,_C-terminal


id: CL:2631
description: Mixed, incl. Peptidase M16, C-terminal, and FtsK domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2631_Mixed,_incl._Peptidase_M16,_C-terminal,_and_FtsK_domain


id: CL:2632
description: Peptidase M16, C-terminal, and FtsK domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2632_Peptidase_M16,_C-terminal,_and_FtsK_domain


id: CL:2641
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2641_Mixed,_incl._CDP-alcohol_phosphatidyltransferase,_and_ATP-dependent_RNA_helicase_DEAD-box,_conserved_site

description:
  Mixed, incl. CDP-alcohol phosphatidyltransferase, and ATP-dependent RNA helicase DEAD-box, conserved site


id: CL:2652
description: Caprolactam degradation, and NmrA-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2652_Caprolactam_degradation,_and_NmrA-like_domain


id: CL:2667
description: Oxidative phosphorylation, and Oxidative phosphorylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2667_Oxidative_phosphorylation,_and_Oxidative_phosphorylation


id: CL:2668
description: Mixed, incl. Cytochrome-c oxidase activity, and Heme biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2668_Mixed,_incl._Cytochrome-c_oxidase_activity,_and_Heme_biosynthesis


id: CL:2688
description: Mixed, incl. Antioxidant, and Aerobic electron transport chain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2688_Mixed,_incl._Antioxidant,_and_Aerobic_electron_transport_chain


id: CL:2705
description: Mixed, incl. Thiamine-containing compound metabolic process, and Quinone metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2705_Mixed,_incl._Thiamine-containing_compound_metabolic_process,_and_Quinone_metabolic_process


id: CL:2706
description: Mixed, incl. Thiamine-containing compound metabolic process, and ABC transporter, CbiO/EcfA subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2706_Mixed,_incl._Thiamine-containing_compound_metabolic_process,_and_ABC_transporter,_CbiO/EcfA_subunit


id: CL:2707
description: Thiamine-containing compound metabolic process, and ABC transporter, CbiO/EcfA subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2707_Thiamine-containing_compound_metabolic_process,_and_ABC_transporter,_CbiO/EcfA_subunit


id: CL:2709
description: Thiamine-containing compound metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2709_Thiamine-containing_compound_metabolic_process


id: CL:2710
description: Thiamine biosynthesis, and Phosphomethylpyrimidine kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2710_Thiamine_biosynthesis,_and_Phosphomethylpyrimidine_kinase_activity


id: CL:2721
description: Thiamine diphosphate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2721_Thiamine_diphosphate_metabolic_process


id: CL:2732
description: ABC transporter, CbiO/EcfA subunit, and BioY family
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2732_ABC_transporter,_CbiO/EcfA_subunit,_and_BioY_family


id: CL:2747
description: Small Multidrug Resistance protein, and Antiport
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2747_Small_Multidrug_Resistance_protein,_and_Antiport


id: CL:2759
description: Mixed, incl. Menaquinone biosynthesis, and Ubiquinone metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2759_Mixed,_incl._Menaquinone_biosynthesis,_and_Ubiquinone_metabolic_process


id: CL:2777
description: Mixed, incl. Polyprenyl synthetase, and UTP metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2777_Mixed,_incl._Polyprenyl_synthetase,_and_UTP_metabolic_process


id: CL:2790
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2790_Mostly_uncharacterized,_incl._Uncharacterised_membrane_protein_YitT,_and_Undecaprenyl-diphosphatase_activity

description:
  Mostly uncharacterized, incl. Uncharacterised membrane protein YitT, and Undecaprenyl-diphosphatase activity


id: CL:2791
description: Mostly uncharacterized, incl. Uncharacterised membrane protein YitT, and RNA repair
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2791_Mostly_uncharacterized,_incl._Uncharacterised_membrane_protein_YitT,_and_RNA_repair


id: CL:2793
description: Mostly uncharacterized, incl. RNA repair, and Dynamin family
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2793_Mostly_uncharacterized,_incl._RNA_repair,_and_Dynamin_family


id: CL:2796
description: Mixed, incl. RNA repair, and Methylglyoxal synthase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2796_Mixed,_incl._RNA_repair,_and_Methylglyoxal_synthase


id: CL:2823
description: Mostly uncharacterized, incl. NADP+ binding, and DinB superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2823_Mostly_uncharacterized,_incl._NADP+_binding,_and_DinB_superfamily


id: CL:2825
description: Mixed, incl. DinB superfamily, and Pyridine nucleotide-disulphide oxidoreductase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2825_Mixed,_incl._DinB_superfamily,_and_Pyridine_nucleotide-disulphide_oxidoreductase


id: CL:2845
description: Mixed, incl. Undecaprenyl-diphosphatase activity, and CBS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2845_Mixed,_incl._Undecaprenyl-diphosphatase_activity,_and_CBS_domain


id: CL:2864
description: Mixed, incl. Phosphate ion transport, and PLD-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2864_Mixed,_incl._Phosphate_ion_transport,_and_PLD-like_domain


id: CL:2865
description: Mixed, incl. Phosphate ion transport, and Alkaline phosphatase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2865_Mixed,_incl._Phosphate_ion_transport,_and_Alkaline_phosphatase_activity


id: CL:2867
description: Mixed, incl. Alkaline phosphatase activity, and Cytochrome P450
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2867_Mixed,_incl._Alkaline_phosphatase_activity,_and_Cytochrome_P450


id: CL:289
description: Lipid oxidation, and Coenzyme A transferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:289_Lipid_oxidation,_and_Coenzyme_A_transferase


id: CL:2896
description: Mixed, incl. Phospholipase D-like domain, and Esterase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2896_Mixed,_incl._Phospholipase_D-like_domain,_and_Esterase-like


id: CL:2916
description: Mixed, incl. Integral component of membrane, and DNA metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2916_Mixed,_incl._Integral_component_of_membrane,_and_DNA_metabolic_process


id: CL:2917
description: Mixed, incl. Integral component of membrane, and DNA metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2917_Mixed,_incl._Integral_component_of_membrane,_and_DNA_metabolic_process


id: CL:2918
description: Mixed, incl. Integral component of membrane, and DNA metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2918_Mixed,_incl._Integral_component_of_membrane,_and_DNA_metabolic_process


id: CL:2919
description: Mostly uncharacterized, incl. Cell division, and Cellular response to stimulus
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2919_Mostly_uncharacterized,_incl._Cell_division,_and_Cellular_response_to_stimulus


id: CL:292
description: Lipid oxidation, and Styrene degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:292_Lipid_oxidation,_and_Styrene_degradation


id: CL:2920
description: Mostly uncharacterized, incl. Cell division, and Establishment of competence for transformation
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2920_Mostly_uncharacterized,_incl._Cell_division,_and_Establishment_of_competence_for_transformation


id: CL:2921
description: Mostly uncharacterized, incl. Cell division, and Establishment of competence for transformation
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2921_Mostly_uncharacterized,_incl._Cell_division,_and_Establishment_of_competence_for_transformation


id: CL:2922
description: Mostly uncharacterized, incl. Establishment of competence for transformation, and Cell division
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2922_Mostly_uncharacterized,_incl._Establishment_of_competence_for_transformation,_and_Cell_division


id: CL:2923
description: Mostly uncharacterized, incl. Establishment of competence for transformation, and Cell division
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2923_Mostly_uncharacterized,_incl._Establishment_of_competence_for_transformation,_and_Cell_division


id: CL:2924
description: Mixed, incl. Cell division, and Cellular response to stimulus
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2924_Mixed,_incl._Cell_division,_and_Cellular_response_to_stimulus


id: CL:2925
description: Mostly uncharacterized, incl. Cell division, and Establishment of competence for transformation
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2925_Mostly_uncharacterized,_incl._Cell_division,_and_Establishment_of_competence_for_transformation


id: CL:2926
description: Mostly uncharacterized, incl. Cell division, and Establishment of competence for transformation
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2926_Mostly_uncharacterized,_incl._Cell_division,_and_Establishment_of_competence_for_transformation


id: CL:2927
description: Mostly uncharacterized, incl. Aromatic acid exporter family member 1, and Cell division
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2927_Mostly_uncharacterized,_incl._Aromatic_acid_exporter_family_member_1,_and_Cell_division


id: CL:2929
description: Mixed, incl. Aromatic acid exporter family member 1, and Cell division
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2929_Mixed,_incl._Aromatic_acid_exporter_family_member_1,_and_Cell_division


id: CL:2931
description: Mixed, incl. Cell division, and CAAX-box protein processing
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2931_Mixed,_incl._Cell_division,_and_CAAX-box_protein_processing


id: CL:2933
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2933_Mixed,_incl._DivIVA_family,_and_Endonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_3-phosphomonoesters

description:
  Mixed, incl. DivIVA family, and Endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3-phosphomonoesters


id: CL:2947
description: Mixed, incl. Septum formation initiator, and CAAX-box protein processing
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2947_Mixed,_incl._Septum_formation_initiator,_and_CAAX-box_protein_processing


id: CL:2959
description: Mixed, incl. Aromatic acid exporter family member 1, and CBS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2959_Mixed,_incl._Aromatic_acid_exporter_family_member_1,_and_CBS_domain


id: CL:2960
description: Mixed, incl. CBS domain, and Tetratricopeptide repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2960_Mixed,_incl._CBS_domain,_and_Tetratricopeptide_repeat


id: CL:2962
description: Mixed, incl. Tetratricopeptide repeat, and Transcription regulators MarR/SlyA-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2962_Mixed,_incl._Tetratricopeptide_repeat,_and_Transcription_regulators_MarR/SlyA-like


id: CL:2979
description: Aromatic acid exporter family member 1, and YtxH-like protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2979_Aromatic_acid_exporter_family_member_1,_and_YtxH-like_protein


id: CL:2997
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2997_Mostly_uncharacterized,_incl._YheA/YmcA-like_domain_superfamily,_and_DNA_replication,_synthesis_of_RNA_primer

description:
  Mostly uncharacterized, incl. YheA/YmcA-like domain superfamily, and DNA replication, synthesis of RNA primer


id: CL:2999
description: Mixed, incl. YheA/YmcA-like domain superfamily, and Polyprenyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:2999_Mixed,_incl._YheA/YmcA-like_domain_superfamily,_and_Polyprenyltransferase_activity


id: CL:3001
description: Mixed, incl. YheA/YmcA-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3001_Mixed,_incl._YheA/YmcA-like_domain_superfamily


id: CL:3024
description: DNA replication, synthesis of RNA primer, and Disulfide bond
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3024_DNA_replication,_synthesis_of_RNA_primer,_and_Disulfide_bond


id: CL:3046
description: Regulatory protein YycH/YycI , domain 2, and tRNA 3-trailer cleavage
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3046_Regulatory_protein_YycH/YycI_,_domain_2,_and_tRNA_3-trailer_cleavage


id: CL:3058
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3058_Mixed,_incl._Regulation_of_response_to_stress,_and_DNA_recombination_and_repair_protein_RecA-like,_ATP-binding_domain

description:
  Mixed, incl. Regulation of response to stress, and DNA recombination and repair protein RecA-like, ATP-binding domain


id: CL:3067
description: Mixed, incl. YtxH-like protein, and Uncharacterised protein family UPF0478
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3067_Mixed,_incl._YtxH-like_protein,_and_Uncharacterised_protein_family_UPF0478


id: CL:3078
description: Mixed, incl. RelA/SpoT, and Gas transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3078_Mixed,_incl._RelA/SpoT,_and_Gas_transport


id: CL:3091
description: Mixed, incl. Sodium:dicarboxylate symporter, and Triphosphoric monoester hydrolase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3091_Mixed,_incl._Sodium:dicarboxylate_symporter,_and_Triphosphoric_monoester_hydrolase_activity


id: CL:3100
description: Mixed, incl. Choline/ethanolamine kinase, and RNA (guanine-N7)-methylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3100_Mixed,_incl._Choline/ethanolamine_kinase,_and_RNA_(guanine-N7)-methylation


id: CL:3113
description: PDZ superfamily, and Kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3113_PDZ_superfamily,_and_Kinase_activity


id: CL:3126
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3126_Mostly_uncharacterized,_incl._DNA_mismatch_repair_MutS_family,_and_Intramembrane_metalloprotease_PrsW

description:
  Mostly uncharacterized, incl. DNA mismatch repair MutS family, and Intramembrane metalloprotease PrsW


id: CL:3129
description: Mixed, incl. DNA mismatch repair MutS family, and DNA polymerase alpha chain like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3129_Mixed,_incl._DNA_mismatch_repair_MutS_family,_and_DNA_polymerase_alpha_chain_like_domain


id: CL:3141
description: Mixed, incl. Positive regulation of molecular function, and RNA polymerase sigma-70 like
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3141_Mixed,_incl._Positive_regulation_of_molecular_function,_and_RNA_polymerase_sigma-70_like


id: CL:3153
description: Mostly uncharacterized, incl. Peptidase C45, and DNA recombination
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3153_Mostly_uncharacterized,_incl._Peptidase_C45,_and_DNA_recombination


id: CL:3154
description: Mostly uncharacterized, incl. Peptidase C45, and DNA-binding protein, MJ1563 type
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3154_Mostly_uncharacterized,_incl._Peptidase_C45,_and_DNA-binding_protein,_MJ1563_type


id: CL:3156
description: Mostly uncharacterized, incl. Peptidase C45, and DNA-binding protein, MJ1563 type
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3156_Mostly_uncharacterized,_incl._Peptidase_C45,_and_DNA-binding_protein,_MJ1563_type


id: CL:3158
description: Mostly uncharacterized, incl. Peptidase C45, and DNA-binding protein, MJ1563 type
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3158_Mostly_uncharacterized,_incl._Peptidase_C45,_and_DNA-binding_protein,_MJ1563_type


id: CL:3160
description: Mixed, incl. Peptidase C45, and DNA-binding protein, MJ1563 type
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3160_Mixed,_incl._Peptidase_C45,_and_DNA-binding_protein,_MJ1563_type


id: CL:3162
description: Mixed, incl. Peptidase C45, and Sigma-70, region 4
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3162_Mixed,_incl._Peptidase_C45,_and_Sigma-70,_region_4


id: CL:3177
description: DNA-binding protein, MJ1563 type, and NfeD-like, C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3177_DNA-binding_protein,_MJ1563_type,_and_NfeD-like,_C-terminal_domain


id: CL:3192
description: Mixed, incl. Protein carboxylation, and Fusaric acid resistance protein family
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3192_Mixed,_incl._Protein_carboxylation,_and_Fusaric_acid_resistance_protein_family


id: CL:3218
description: Mixed, incl. MatE, and OsmC/Ohr family
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3218_Mixed,_incl._MatE,_and_OsmC/Ohr_family


id: CL:322
description: Steroid metabolic process, and Short-chain dehydrogenase/reductase SDR
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:322_Steroid_metabolic_process,_and_Short-chain_dehydrogenase/reductase_SDR


id: CL:3229
description: Mixed, incl. Type 1 protein exporter, and Dynamin family
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3229_Mixed,_incl._Type_1_protein_exporter,_and_Dynamin_family


id: CL:3231
description: Mixed, incl. Type 1 protein exporter, and NAD/GMP synthase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3231_Mixed,_incl._Type_1_protein_exporter,_and_NAD/GMP_synthase


id: CL:3258
description: Mostly uncharacterized, incl. Transglutaminase-like, and Azaguanine-like transporters
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3258_Mostly_uncharacterized,_incl._Transglutaminase-like,_and_Azaguanine-like_transporters


id: CL:3259
description: Mixed, incl. Transglutaminase-like, and Azaguanine-like transporters
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3259_Mixed,_incl._Transglutaminase-like,_and_Azaguanine-like_transporters


id: CL:3270
description: Mixed, incl. Nucleotide-excision repair, and Ribonuclease H superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3270_Mixed,_incl._Nucleotide-excision_repair,_and_Ribonuclease_H_superfamily


id: CL:3279
description: Mixed, incl. Acetoin catabolic process, and Aminobenzoate degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3279_Mixed,_incl._Acetoin_catabolic_process,_and_Aminobenzoate_degradation


id: CL:3280
description: Mixed, incl. Acetoin catabolic process, and Toxin-antitoxin complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3280_Mixed,_incl._Acetoin_catabolic_process,_and_Toxin-antitoxin_complex


id: CL:3282
description: Acetoin catabolic process, and AMP-binding, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3282_Acetoin_catabolic_process,_and_AMP-binding,_conserved_site


id: CL:3301
description: Mostly uncharacterized, incl. Acylphosphatase, conserved site, and NAD(P)H-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3301_Mostly_uncharacterized,_incl._Acylphosphatase,_conserved_site,_and_NAD(P)H-binding


id: CL:3303
description: Mixed, incl. NAD(P)H-binding , and YheA/YmcA-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3303_Mixed,_incl._NAD(P)H-binding_,_and_YheA/YmcA-like_domain_superfamily


id: CL:3322
description: Mostly uncharacterized, incl. AbrB family, and MatE
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3322_Mostly_uncharacterized,_incl._AbrB_family,_and_MatE


id: CL:3324
description: Mostly uncharacterized, incl. AbrB family, and AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3324_Mostly_uncharacterized,_incl._AbrB_family,_and_AAA_domain


id: CL:3325
description: Mostly uncharacterized, incl. Rhomboid family, and N-acetyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3325_Mostly_uncharacterized,_incl._Rhomboid_family,_and_N-acetyltransferase


id: CL:3326
description: Mixed, incl. N-acetyltransferase, and Protein complex oligomerization
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3326_Mixed,_incl._N-acetyltransferase,_and_Protein_complex_oligomerization


id: CL:3337
description: Mixed, incl. Rhomboid family, and Cyclo-ligase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3337_Mixed,_incl._Rhomboid_family,_and_Cyclo-ligase_activity


id: CL:3347
description: Mixed, incl. AAA domain, and AbrB family
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3347_Mixed,_incl._AAA_domain,_and_AbrB_family


id: CL:3370
description: Mixed, incl. VanZ-like, and 4Fe-4S binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3370_Mixed,_incl._VanZ-like,_and_4Fe-4S_binding_domain


id: CL:338
description: Alpha/beta hydrolase fold-1, and FAD-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:338_Alpha/beta_hydrolase_fold-1,_and_FAD-binding_domain


id: CL:3381
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3381_Mixed,_incl._Protein_of_unknown_function_DUF6612,_and_Multidrug_efflux_transporter_AcrB_TolC_docking_domain,_DN/DC_subdomains

description:
  Mixed, incl. Protein of unknown function DUF6612, and Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains


id: CL:3382
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3382_Mixed,_incl._Protein_of_unknown_function_DUF6612,_and_Multidrug_efflux_transporter_AcrB_TolC_docking_domain,_DN/DC_subdomains

description:
  Mixed, incl. Protein of unknown function DUF6612, and Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains


id: CL:3384
description: Mixed, incl. Sulfite exporter TauE/SafE, and Double-strand break repair
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3384_Mixed,_incl._Sulfite_exporter_TauE/SafE,_and_Double-strand_break_repair


id: CL:340
description: Epoxide hydrolase-like, and ubiE/COQ5 methyltransferase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:340_Epoxide_hydrolase-like,_and_ubiE/COQ5_methyltransferase_family


id: CL:3405
description: Mixed, incl. Isochorismatase-like, and M42 glutamyl aminopeptidase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3405_Mixed,_incl._Isochorismatase-like,_and_M42_glutamyl_aminopeptidase


id: CL:3418
description: Mixed, incl. Signal transduction, and Two-component system
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3418_Mixed,_incl._Signal_transduction,_and_Two-component_system


id: CL:3420
description: Mixed, incl. Signal transduction, and STAS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3420_Mixed,_incl._Signal_transduction,_and_STAS_domain


id: CL:3421
description: Mixed, incl. Phosphorelay signal transduction system, and STAS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3421_Mixed,_incl._Phosphorelay_signal_transduction_system,_and_STAS_domain


id: CL:3422
description: Phosphorelay signal transduction system, and STAS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3422_Phosphorelay_signal_transduction_system,_and_STAS_domain


id: CL:3423
description: Signal transduction, and STAS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3423_Signal_transduction,_and_STAS_domain


id: CL:3424
description: Signal transduction, and STAS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3424_Signal_transduction,_and_STAS_domain


id: CL:3426
description: Phosphorelay signal transduction system, and EAL domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3426_Phosphorelay_signal_transduction_system,_and_EAL_domain


id: CL:3427
description: Mixed, incl. Diguanylate cyclase, and Bacterial chemotaxis
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3427_Mixed,_incl._Diguanylate_cyclase,_and_Bacterial_chemotaxis


id: CL:3446
description: 5TMR of 5TMR-LYT, and EAL domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3446_5TMR_of_5TMR-LYT,_and_EAL_domain


id: CL:3460
description: Two-component regulatory system, and PAS-associated, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3460_Two-component_regulatory_system,_and_PAS-associated,_C-terminal


id: CL:3463
description: His Kinase A (phosphoacceptor) domain, and cheY-homologous receiver domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3463_His_Kinase_A_(phosphoacceptor)_domain,_and_cheY-homologous_receiver_domain


id: CL:3466
description: HAMP domain, and Signal transduction histidine kinase, phosphotransfer (Hpt) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3466_HAMP_domain,_and_Signal_transduction_histidine_kinase,_phosphotransfer_(Hpt)_domain


id: CL:3497
description: STAS domain, and PPM-type phosphatase-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3497_STAS_domain,_and_PPM-type_phosphatase-like_domain


id: CL:3500
description: STAS domain, and PPM-type phosphatase-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3500_STAS_domain,_and_PPM-type_phosphatase-like_domain


id: CL:3521
description: DNA binding HTH domain, Fis-type
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3521_DNA_binding_HTH_domain,_Fis-type


id: CL:3530
description: Helix_turn_helix, Lux Regulon, and Histidine kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3530_Helix_turn_helix,_Lux_Regulon,_and_Histidine_kinase


id: CL:3531
description: Helix_turn_helix, Lux Regulon, and Histidine kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3531_Helix_turn_helix,_Lux_Regulon,_and_Histidine_kinase


id: CL:3534
description: Helix_turn_helix, Lux Regulon, and Histidine kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3534_Helix_turn_helix,_Lux_Regulon,_and_Histidine_kinase


id: CL:3551
description: Mixed, incl. Cell wall-active antibiotics response 4TMS YvqF, and Histidine kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3551_Mixed,_incl._Cell_wall-active_antibiotics_response_4TMS_YvqF,_and_Histidine_kinase


id: CL:3563
description: Mixed, incl. Regulation of cell death, and Type II secretion system (T2SS), protein F
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3563_Mixed,_incl._Regulation_of_cell_death,_and_Type_II_secretion_system_(T2SS),_protein_F


id: CL:3568
description: Type II secretion system (T2SS), protein F, and Type II/IV secretion system protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3568_Type_II_secretion_system_(T2SS),_protein_F,_and_Type_II/IV_secretion_system_protein


id: CL:3586
description: Mixed, incl. Flagellar assembly, and MarR-type HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3586_Mixed,_incl._Flagellar_assembly,_and_MarR-type_HTH_domain


id: CL:359
description: FAD-binding domain, and Cytochrome P450
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:359_FAD-binding_domain,_and_Cytochrome_P450


id: CL:3602
description: Mixed, incl. Cilium, and Mannose type O-glycan biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3602_Mixed,_incl._Cilium,_and_Mannose_type_O-glycan_biosynthesis


id: CL:3603
description: Mixed, incl. Cilium, and Bacterial-type flagellum organization
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3603_Mixed,_incl._Cilium,_and_Bacterial-type_flagellum_organization


id: CL:3604
description: Mixed, incl. Cilium, and Bacterial-type flagellum organization
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3604_Mixed,_incl._Cilium,_and_Bacterial-type_flagellum_organization


id: CL:3606
description: Cilium, and Bacterial-type flagellum organization
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3606_Cilium,_and_Bacterial-type_flagellum_organization


id: CL:3626
description: Mixed, incl. M42 glutamyl aminopeptidase, and Protein-tyrosine phosphatase, low molecular weight
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3626_Mixed,_incl._M42_glutamyl_aminopeptidase,_and_Protein-tyrosine_phosphatase,_low_molecular_weight


id: CL:3639
description: Mixed, incl. Mannose type O-glycan biosynthesis, and CAP domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3639_Mixed,_incl._Mannose_type_O-glycan_biosynthesis,_and_CAP_domain


id: CL:3641
description: Mixed, incl. Regulation of sporulation, and Ribbon-helix-helix
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3641_Mixed,_incl._Regulation_of_sporulation,_and_Ribbon-helix-helix


id: CL:3670
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3670_Mixed,_incl._Polyamine_metabolic_process,_and_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_linear_amidines

description:
  Mixed, incl. Polyamine metabolic process, and Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines


id: CL:3672
description: Polyamine metabolic process, and Ureohydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3672_Polyamine_metabolic_process,_and_Ureohydrolase


id: CL:3688
description: Mixed, incl. Nickel cation binding, and dTDP metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3688_Mixed,_incl._Nickel_cation_binding,_and_dTDP_metabolic_process


id: CL:3706
description: Mostly uncharacterized, incl. C-5 methylation of cytosine, and Endonuclease III
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3706_Mostly_uncharacterized,_incl._C-5_methylation_of_cytosine,_and_Endonuclease_III


id: CL:3708
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3708_Mostly_uncharacterized,_incl._C-5_methylation_of_cytosine,_and_rRNA_(guanine)_methyltransferase_activity

description:
  Mostly uncharacterized, incl. C-5 methylation of cytosine, and rRNA (guanine) methyltransferase activity


id: CL:3709
description: Mixed, incl. C-5 methylation of cytosine, and Membrane-bounded organelle
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3709_Mixed,_incl._C-5_methylation_of_cytosine,_and_Membrane-bounded_organelle


id: CL:3720
description: Mixed, incl. rRNA (guanine) methyltransferase activity, and LSM domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3720_Mixed,_incl._rRNA_(guanine)_methyltransferase_activity,_and_LSM_domain_superfamily


id: CL:373
description: Zinc-binding dehydrogenase, and Transcriptional regulator C-terminal region
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:373_Zinc-binding_dehydrogenase,_and_Transcriptional_regulator_C-terminal_region


id: CL:3743
description: Mixed, incl. Polysaccharide biosynthetic process, and Glycosyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3743_Mixed,_incl._Polysaccharide_biosynthetic_process,_and_Glycosyltransferase_activity


id: CL:3745
description: Mixed, incl. Polysaccharide biosynthetic process, and Glycosyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3745_Mixed,_incl._Polysaccharide_biosynthetic_process,_and_Glycosyltransferase_activity


id: CL:3746
description: Mixed, incl. Polysaccharide biosynthetic process, and Glycosyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3746_Mixed,_incl._Polysaccharide_biosynthetic_process,_and_Glycosyltransferase_activity


id: CL:3748
description: Mixed, incl. Polysaccharide biosynthetic process, and Glycosyl transferases group 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3748_Mixed,_incl._Polysaccharide_biosynthetic_process,_and_Glycosyl_transferases_group_1


id: CL:3749
description: Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and Glycosyl transferases group 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3749_Mixed,_incl._O-Antigen_nucleotide_sugar_biosynthesis,_and_Glycosyl_transferases_group_1


id: CL:3751
description: Mixed, incl. TupA-like ATPgrasp, and UDP-glucose 4-epimerase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3751_Mixed,_incl._TupA-like_ATPgrasp,_and_UDP-glucose_4-epimerase_activity


id: CL:3754
description: UDP-glucose 4-epimerase activity, and Bacterial sugar transferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3754_UDP-glucose_4-epimerase_activity,_and_Bacterial_sugar_transferase


id: CL:3777
description: Mixed, incl. Protein glycosylation, and Glycosyl transferase family 4
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3777_Mixed,_incl._Protein_glycosylation,_and_Glycosyl_transferase_family_4


id: CL:3790
description: Polysaccharide biosynthetic process, and NAD dependent epimerase/dehydratase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3790_Polysaccharide_biosynthetic_process,_and_NAD_dependent_epimerase/dehydratase_family


id: CL:3791
description: Mixed, incl. NAD dependent epimerase/dehydratase family, and Glycosyl transferases group 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3791_Mixed,_incl._NAD_dependent_epimerase/dehydratase_family,_and_Glycosyl_transferases_group_1


id: CL:3794
description: O-Antigen nucleotide sugar biosynthesis, and Bacterial sugar transferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3794_O-Antigen_nucleotide_sugar_biosynthesis,_and_Bacterial_sugar_transferase


id: CL:3813
description: Capsular polysaccharide synthesis, CpsB/CapC, and Peptidyl-tyrosine modification
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3813_Capsular_polysaccharide_synthesis,_CpsB/CapC,_and_Peptidyl-tyrosine_modification


id: CL:3834
description: Mixed, incl. GtrA-like protein, and Glycosyltransferase 2-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3834_Mixed,_incl._GtrA-like_protein,_and_Glycosyltransferase_2-like


id: CL:3835
description: Mixed, incl. GtrA-like protein, and Submerged biofilm formation
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3835_Mixed,_incl._GtrA-like_protein,_and_Submerged_biofilm_formation


id: CL:3846
description: Mixed, incl. GtrA-like protein, and Hexokinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3846_Mixed,_incl._GtrA-like_protein,_and_Hexokinase_activity


id: CL:3858
description: CDP-glycerol glycerophosphotransferase, and ABC-2 type transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3858_CDP-glycerol_glycerophosphotransferase,_and_ABC-2_type_transporter


id: CL:3881
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3881_Mostly_uncharacterized,_incl._Single-species_biofilm_formation,_and_ABC-type_amino_acid_transporter_activity

description:
  Mostly uncharacterized, incl. Single-species biofilm formation, and ABC-type amino acid transporter activity


id: CL:3884
description: Mixed, incl. Single-species biofilm formation, and TPR repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3884_Mixed,_incl._Single-species_biofilm_formation,_and_TPR_repeat


id: CL:3897
description: Mixed, incl. ABC-type amino acid transporter activity, and Uracil-DNA glycosylase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3897_Mixed,_incl._ABC-type_amino_acid_transporter_activity,_and_Uracil-DNA_glycosylase-like


id: CL:3906
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3906_Mixed,_incl._Acyltransferase_activity,_transferring_groups_other_than_amino-acyl_groups,_and_Homeobox-like_domain_superfamily

description:
  Mixed, incl. Acyltransferase activity, transferring groups other than amino-acyl groups, and Homeobox-like domain superfamily


id: CL:3907
description: Mixed, incl. Acetyltransferase activity, and Homeobox-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3907_Mixed,_incl._Acetyltransferase_activity,_and_Homeobox-like_domain_superfamily


id: CL:3908
description: Mixed, incl. GNAT domain, and DNA binding HTH domain, AraC-type
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3908_Mixed,_incl._GNAT_domain,_and_DNA_binding_HTH_domain,_AraC-type


id: CL:3909
description: Mixed, incl. GNAT domain, and DNA binding HTH domain, AraC-type
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3909_Mixed,_incl._GNAT_domain,_and_DNA_binding_HTH_domain,_AraC-type


id: CL:3910
description: Mixed, incl. Acetyltransferase (GNAT) domain, and Siderophore metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3910_Mixed,_incl._Acetyltransferase_(GNAT)_domain,_and_Siderophore_metabolic_process


id: CL:3911
description: Mixed, incl. Acetyltransferase (GNAT) domain, and Siderophore metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3911_Mixed,_incl._Acetyltransferase_(GNAT)_domain,_and_Siderophore_metabolic_process


id: CL:3912
description: Mixed, incl. Acetyltransferase (GNAT) domain, and Siderophore metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3912_Mixed,_incl._Acetyltransferase_(GNAT)_domain,_and_Siderophore_metabolic_process


id: CL:3914
description: Acetyltransferase (GNAT) domain, and Siderophore metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3914_Acetyltransferase_(GNAT)_domain,_and_Siderophore_metabolic_process


id: CL:3917
description: Siderophore metabolic process, and L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3917_Siderophore_metabolic_process,_and_L-lysine_6-monooxygenase/L-ornithine_5-monooxygenase


id: CL:3928
description: Acetyltransferase (GNAT) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3928_Acetyltransferase_(GNAT)_domain


id: CL:3942
description: Mixed, incl. N-acetyltransferase, and Phenazine biosynthesis PhzF protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3942_Mixed,_incl._N-acetyltransferase,_and_Phenazine_biosynthesis_PhzF_protein


id: CL:3953
description: Mixed, incl. Acyltransferase family, and Choline/ethanolamine kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3953_Mixed,_incl._Acyltransferase_family,_and_Choline/ethanolamine_kinase


id: CL:3962
description: Mixed, incl. Met-10+ like-protein, and Ion channel
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3962_Mixed,_incl._Met-10+_like-protein,_and_Ion_channel


id: CL:3973
description: Ectoine metabolic process, and DNA binding HTH domain, AraC-type
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3973_Ectoine_metabolic_process,_and_DNA_binding_HTH_domain,_AraC-type


id: CL:3974
description: Ectoine metabolic process, and DNA binding HTH domain, AraC-type
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3974_Ectoine_metabolic_process,_and_DNA_binding_HTH_domain,_AraC-type


id: CL:3984
description: DNA binding HTH domain, AraC-type
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3984_DNA_binding_HTH_domain,_AraC-type


id: CL:3993
description: Mixed, incl. Acetyltransferase (GNAT) domain, and Cupin 2, conserved barrel
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:3993_Mixed,_incl._Acetyltransferase_(GNAT)_domain,_and_Cupin_2,_conserved_barrel


id: CL:4005
description: Mixed, incl. dephospho-CoA kinase activity, and Ferredoxin--NADP reductase, type 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4005_Mixed,_incl._dephospho-CoA_kinase_activity,_and_Ferredoxin--NADP_reductase,_type_2


id: CL:4025
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4025_Mostly_uncharacterized,_incl._EamA_domain,_and_Glyoxalase/Bleomycin_resistance_protein/Dihydroxybiphenyl_dioxygenase

description:
  Mostly uncharacterized, incl. EamA domain, and Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase


id: CL:4027
description: Mostly uncharacterized, incl. PhnB-like, and CsbD-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4027_Mostly_uncharacterized,_incl._PhnB-like,_and_CsbD-like


id: CL:4028
description: Mixed, incl. CsbD-like, and Biosynthesis of various secondary metabolites - part 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4028_Mixed,_incl._CsbD-like,_and_Biosynthesis_of_various_secondary_metabolites_-_part_2


id: CL:4030
description: Mixed, incl. CsbD-like, and Biosynthesis of various secondary metabolites - part 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4030_Mixed,_incl._CsbD-like,_and_Biosynthesis_of_various_secondary_metabolites_-_part_2


id: CL:4033
description: Mixed, incl. CsbD-like, and Coenzyme F420 binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4033_Mixed,_incl._CsbD-like,_and_Coenzyme_F420_binding


id: CL:405
description: Mixed, incl. Carbohydrate metabolic process, and Phosphotransferase system (PTS)
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:405_Mixed,_incl._Carbohydrate_metabolic_process,_and_Phosphotransferase_system_(PTS)


id: CL:4061
description: Mixed, incl. PhnB-like, and CNNM, transmembrane domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4061_Mixed,_incl._PhnB-like,_and_CNNM,_transmembrane_domain


id: CL:4062
description: Mixed, incl. CNNM, transmembrane domain, and Amino acid salvage
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4062_Mixed,_incl._CNNM,_transmembrane_domain,_and_Amino_acid_salvage


id: CL:407
description: Phosphotransferase system (PTS), and Carbohydrate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:407_Phosphotransferase_system_(PTS),_and_Carbohydrate_metabolic_process


id: CL:4073
description: PhnB-like, and START-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4073_PhnB-like,_and_START-like_domain_superfamily


id: CL:4085
description: Mixed, incl. EamA domain, and beta-Lactam resistance
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4085_Mixed,_incl._EamA_domain,_and_beta-Lactam_resistance


id: CL:4087
description: Mixed, incl. EamA domain, and NAD dependent epimerase/dehydratase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4087_Mixed,_incl._EamA_domain,_and_NAD_dependent_epimerase/dehydratase_family


id: CL:4088
description: Mixed, incl. EamA-like transporter family, and Acetyltransferase (GNAT) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4088_Mixed,_incl._EamA-like_transporter_family,_and_Acetyltransferase_(GNAT)_domain


id: CL:4089
description: Mixed, incl. L-threonine transmembrane transporter activity, and Acetyltransferase (GNAT) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4089_Mixed,_incl._L-threonine_transmembrane_transporter_activity,_and_Acetyltransferase_(GNAT)_domain


id: CL:409
description: Phosphotransferase system (PTS), and Carbohydrate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:409_Phosphotransferase_system_(PTS),_and_Carbohydrate_metabolic_process


id: CL:4098
description: Mixed, incl. LysR, substrate-binding, and EamA-like transporter family
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4098_Mixed,_incl._LysR,_substrate-binding,_and_EamA-like_transporter_family


id: CL:410
description: Phosphotransferase system (PTS), and Carbohydrate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:410_Phosphotransferase_system_(PTS),_and_Carbohydrate_metabolic_process


id: CL:4107
description: Mixed, incl. EamA domain, and Trigger factor/SurA domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4107_Mixed,_incl._EamA_domain,_and_Trigger_factor/SurA_domain_superfamily


id: CL:411
description: Phosphotransferase system (PTS), and Glycosidase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:411_Phosphotransferase_system_(PTS),_and_Glycosidase


id: CL:412
description: Phosphotransferase system (PTS), and Glycosidase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:412_Phosphotransferase_system_(PTS),_and_Glycosidase


id: CL:4128
description: Mixed, incl. Response to nutrient, and Glyoxalase III activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4128_Mixed,_incl._Response_to_nutrient,_and_Glyoxalase_III_activity


id: CL:413
description: Phosphotransferase system, and Glycosidase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:413_Phosphotransferase_system,_and_Glycosidase


id: CL:4142
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4142_Mostly_uncharacterized,_incl._PlcR,_tetratricopeptide_repeat,_and_Cellular_polysaccharide_metabolic_process

description:
  Mostly uncharacterized, incl. PlcR, tetratricopeptide repeat, and Cellular polysaccharide metabolic process


id: CL:4143
description: Mixed, incl. PlcR, tetratricopeptide repeat, and Capsule organization
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4143_Mixed,_incl._PlcR,_tetratricopeptide_repeat,_and_Capsule_organization


id: CL:4144
description: Mixed, incl. PlcR, tetratricopeptide repeat, and Diacylglycerol/lipid kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4144_Mixed,_incl._PlcR,_tetratricopeptide_repeat,_and_Diacylglycerol/lipid_kinase


id: CL:4146
description: Mixed, incl. Tetratricopeptide repeat, and Diacylglycerol/lipid kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4146_Mixed,_incl._Tetratricopeptide_repeat,_and_Diacylglycerol/lipid_kinase


id: CL:416
description: Phosphotransferase system, and CAT RNA binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:416_Phosphotransferase_system,_and_CAT_RNA_binding_domain


id: CL:4164
description: Mixed, incl. Capsule organization, and Capsule synthesis protein, CapA
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4164_Mixed,_incl._Capsule_organization,_and_Capsule_synthesis_protein,_CapA


id: CL:418
description: Phosphotransferase system, and CAT RNA binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:418_Phosphotransferase_system,_and_CAT_RNA_binding_domain


id: CL:4182
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4182_Mostly_uncharacterized,_incl._Flavin_containing_amine_oxidoreductase,_and_Reactive_nitrogen_species_metabolic_process

description:
  Mostly uncharacterized, incl. Flavin containing amine oxidoreductase, and Reactive nitrogen species metabolic process


id: CL:4184
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4184_Mixed,_incl._Flavin_containing_amine_oxidoreductase,_and_Reactive_nitrogen_species_metabolic_process

description:
  Mixed, incl. Flavin containing amine oxidoreductase, and Reactive nitrogen species metabolic process


id: CL:4199
description: Mixed, incl. Sodium/calcium exchanger protein, and Sugar (and other) transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4199_Mixed,_incl._Sodium/calcium_exchanger_protein,_and_Sugar_(and_other)_transporter


id: CL:4211
description: Mixed, incl. Response to chemical, and Sulfur metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4211_Mixed,_incl._Response_to_chemical,_and_Sulfur_metabolism


id: CL:4212
description: Mixed, incl. Sulfur metabolism, and Response to chemical
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4212_Mixed,_incl._Sulfur_metabolism,_and_Response_to_chemical


id: CL:4213
description: Mixed, incl. Sulfur metabolism, and Response to chemical
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4213_Mixed,_incl._Sulfur_metabolism,_and_Response_to_chemical


id: CL:4214
description: Mixed, incl. Riboflavin metabolism, and Dioxygenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4214_Mixed,_incl._Riboflavin_metabolism,_and_Dioxygenase_activity


id: CL:4215
description: Mixed, incl. Dioxygenase activity, and MarR-type HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4215_Mixed,_incl._Dioxygenase_activity,_and_MarR-type_HTH_domain


id: CL:4217
description: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily, and Phospholipase/Carboxylesterase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4217_Glyoxalase/Bleomycin_resistance_protein/Dioxygenase_superfamily,_and_Phospholipase/Carboxylesterase


id: CL:4219
description: Phospholipase/Carboxylesterase, and Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4219_Phospholipase/Carboxylesterase,_and_Glyoxalase/Bleomycin_resistance_protein/Dioxygenase_superfamily


id: CL:4239
description: Mixed, incl. Nitroreductase, and Response to amino acid
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4239_Mixed,_incl._Nitroreductase,_and_Response_to_amino_acid


id: CL:4250
description: Mixed, incl. Luciferase-like domain, and Riboflavin metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4250_Mixed,_incl._Luciferase-like_domain,_and_Riboflavin_metabolism


id: CL:4251
description: Mixed, incl. Luciferase-like domain, and Flavin reductase like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4251_Mixed,_incl._Luciferase-like_domain,_and_Flavin_reductase_like_domain


id: CL:4253
description: Flavin reductase like domain, and Luciferase-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4253_Flavin_reductase_like_domain,_and_Luciferase-like_domain


id: CL:4272
description: Mixed, incl. Arsenite transport, and Cation/H+ exchanger
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4272_Mixed,_incl._Arsenite_transport,_and_Cation/H+_exchanger


id: CL:4281
description: Mixed, incl. NADH:flavin oxidoreductase / NADH oxidase family, and DoxX family
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4281_Mixed,_incl._NADH:flavin_oxidoreductase_/_NADH_oxidase_family,_and_DoxX_family


id: CL:4293
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4293_Mixed,_incl._Helix_turn_helix,_Arsenical_Resistance_Operon_Repressor,_and_Zinc-binding_dehydrogenase

description:
  Mixed, incl. Helix_turn_helix, Arsenical Resistance Operon Repressor, and Zinc-binding dehydrogenase


id: CL:4309
description: Mixed, incl. Cupin, and Methylglyoxal synthase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4309_Mixed,_incl._Cupin,_and_Methylglyoxal_synthase


id: CL:4310
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4310_Mixed,_incl._Mandelate_racemase/muconate_lactonizing_enzyme,_N-terminal_domain,_and_Dihydrouridine_synthase_(Dus)

description:
  Mixed, incl. Mandelate racemase/muconate lactonizing enzyme, N-terminal domain, and Dihydrouridine synthase (Dus)


id: CL:4319
description: Mixed, incl. Cupin, and Methylglyoxal synthase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4319_Mixed,_incl._Cupin,_and_Methylglyoxal_synthase


id: CL:4330
description: Mixed, incl. MetI-like superfamily, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4330_Mixed,_incl._MetI-like_superfamily,_and_Signal


id: CL:4331
description: Mixed, incl. MetI-like superfamily, and Bacterial extracellular solute-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4331_Mixed,_incl._MetI-like_superfamily,_and_Bacterial_extracellular_solute-binding_protein


id: CL:4332
description: Mostly uncharacterized, incl. Carotenoid biosynthesis, and Glycerophospholipid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4332_Mostly_uncharacterized,_incl._Carotenoid_biosynthesis,_and_Glycerophospholipid_metabolism


id: CL:4333
description: Mixed, incl. Carotenoid biosynthesis, and ABC-type polyamine transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4333_Mixed,_incl._Carotenoid_biosynthesis,_and_ABC-type_polyamine_transporter_activity


id: CL:4334
description: Mixed, incl. Carotenoid biosynthesis, and ABC-type polyamine transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4334_Mixed,_incl._Carotenoid_biosynthesis,_and_ABC-type_polyamine_transporter_activity


id: CL:4335
description: Mixed, incl. Carotenoid biosynthesis, and ABC-type polyamine transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4335_Mixed,_incl._Carotenoid_biosynthesis,_and_ABC-type_polyamine_transporter_activity


id: CL:4336
description: Mixed, incl. Carotenoid biosynthesis, and ABC-type polyamine transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4336_Mixed,_incl._Carotenoid_biosynthesis,_and_ABC-type_polyamine_transporter_activity


id: CL:4337
description: Mixed, incl. Carotenoid biosynthesis, and Sortase F
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4337_Mixed,_incl._Carotenoid_biosynthesis,_and_Sortase_F


id: CL:4355
description: Mixed, incl. Sortase F, and RNA polymerase sigma-70 like
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4355_Mixed,_incl._Sortase_F,_and_RNA_polymerase_sigma-70_like


id: CL:4366
description: Mixed, incl. ABC-type polyamine transporter activity, and CDP-alcohol phosphatidyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4366_Mixed,_incl._ABC-type_polyamine_transporter_activity,_and_CDP-alcohol_phosphatidyltransferase


id: CL:4369
description: ABC-type polyamine transporter activity, and CDP-alcohol phosphatidyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4369_ABC-type_polyamine_transporter_activity,_and_CDP-alcohol_phosphatidyltransferase


id: CL:4385
description: Predicted membrane protein (DUF2254), and Alpha/beta hydrolase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4385_Predicted_membrane_protein_(DUF2254),_and_Alpha/beta_hydrolase_family


id: CL:4394
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4394_Mixed,_incl._Chlorocyclohexane_and_chlorobenzene_degradation,_and_Purine_nucleoside_metabolic_process

description:
  Mixed, incl. Chlorocyclohexane and chlorobenzene degradation, and Purine nucleoside metabolic process


id: CL:4408
description: Mixed, incl. Glutaredoxin, and TspO/MBR family
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4408_Mixed,_incl._Glutaredoxin,_and_TspO/MBR_family


id: CL:4422
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4422_Mixed,_incl._Alkyl_hydroperoxide_reductase_subunit_C/_Thiol_specific_antioxidant,_and_Flavodoxin-like_fold

description:
  Mixed, incl. Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant, and Flavodoxin-like fold


id: CL:4424
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4424_Mixed,_incl._Alkyl_hydroperoxide_reductase_subunit_C/_Thiol_specific_antioxidant,_and_DeoC/FbaB/LacD_aldolase

description:
  Mixed, incl. Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant, and DeoC/FbaB/LacD aldolase


id: CL:4449
description: Mixed, incl. MetI-like superfamily, and Bacterial extracellular solute-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4449_Mixed,_incl._MetI-like_superfamily,_and_Bacterial_extracellular_solute-binding_protein


id: CL:4451
description: MetI-like superfamily, and Bacterial extracellular solute-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4451_MetI-like_superfamily,_and_Bacterial_extracellular_solute-binding_protein


id: CL:4453
description: ABC-type maltose transporter activity, and Bacterial extracellular solute-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4453_ABC-type_maltose_transporter_activity,_and_Bacterial_extracellular_solute-binding_protein


id: CL:4455
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4455_ABC-type_maltose_transporter_activity,_and_ATP-binding_cassette_(ABC)_transporter_complex,_substrate-binding_subunit-containing

description:
  ABC-type maltose transporter activity, and ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing


id: CL:4494
description: Mixed, incl. Arabinose metabolic process, and Xylose metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4494_Mixed,_incl._Arabinose_metabolic_process,_and_Xylose_metabolism


id: CL:4496
description: Xylanase activity, and SGNH hydrolase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4496_Xylanase_activity,_and_SGNH_hydrolase_superfamily


id: CL:4509
description: Arabinose catabolic process, and Glycosyl hydrolases family 43
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4509_Arabinose_catabolic_process,_and_Glycosyl_hydrolases_family_43


id: CL:4524
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4524_Mostly_uncharacterized,_incl._Thiolester_hydrolase_activity,_and_UbiA_prenyltransferase_domain_containing_protein_1

description:
  Mostly uncharacterized, incl. Thiolester hydrolase activity, and UbiA prenyltransferase domain containing protein 1


id: CL:4525
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4525_Mostly_uncharacterized,_incl._UbiA_prenyltransferase_domain_containing_protein_1,_and_Thiolester_hydrolase_activity

description:
  Mostly uncharacterized, incl. UbiA prenyltransferase domain containing protein 1, and Thiolester hydrolase activity


id: CL:4527
description: Mixed, incl. CoA hydrolase activity, and Galactose-binding-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4527_Mixed,_incl._CoA_hydrolase_activity,_and_Galactose-binding-like_domain_superfamily


id: CL:4548
description: Mixed, incl. Small Multidrug Resistance protein, and Sortase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4548_Mixed,_incl._Small_Multidrug_Resistance_protein,_and_Sortase_domain


id: CL:4567
description: Mixed, incl. Gluconate transporter, and Sigma-54 interaction domain, ATP-binding site 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4567_Mixed,_incl._Gluconate_transporter,_and_Sigma-54_interaction_domain,_ATP-binding_site_1


id: CL:4581
description: Mixed, incl. Pantothenate biosynthesis, and Malate:quinone-oxidoreductase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4581_Mixed,_incl._Pantothenate_biosynthesis,_and_Malate:quinone-oxidoreductase


id: CL:4582
description: Pantothenate biosynthesis, and Protein of unknown function DUF3942
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4582_Pantothenate_biosynthesis,_and_Protein_of_unknown_function_DUF3942


id: CL:4593
description: Mixed, incl. Malate:quinone-oxidoreductase, and ubiE/COQ5 methyltransferase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4593_Mixed,_incl._Malate:quinone-oxidoreductase,_and_ubiE/COQ5_methyltransferase_family


id: CL:4602
description: Mixed, incl. Nitrogen metabolism, and Na+-translocating membrane potential-generating system MpsC
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4602_Mixed,_incl._Nitrogen_metabolism,_and_Na+-translocating_membrane_potential-generating_system_MpsC


id: CL:4603
description: Nitrogen metabolism, and Na+-translocating membrane potential-generating system MpsC
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4603_Nitrogen_metabolism,_and_Na+-translocating_membrane_potential-generating_system_MpsC


id: CL:4625
description: Mixed, incl. Nicotinate phosphoribosyltransferase family, and MerR-type HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4625_Mixed,_incl._Nicotinate_phosphoribosyltransferase_family,_and_MerR-type_HTH_domain


id: CL:4639
description: Mixed, incl. Two-component system, and Glutathione metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4639_Mixed,_incl._Two-component_system,_and_Glutathione_metabolism


id: CL:4640
description: Mostly uncharacterized, incl. GntR, C-terminal, and Glutathione metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4640_Mostly_uncharacterized,_incl._GntR,_C-terminal,_and_Glutathione_metabolism


id: CL:4641
description: Mixed, incl. GntR, C-terminal, and Cyclophilin-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4641_Mixed,_incl._GntR,_C-terminal,_and_Cyclophilin-like_domain_superfamily


id: CL:4642
description: Mixed, incl. Cyclophilin-like domain superfamily, and Domain of unknown function DUF1989
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4642_Mixed,_incl._Cyclophilin-like_domain_superfamily,_and_Domain_of_unknown_function_DUF1989


id: CL:4643
description: Mixed, incl. Cyclophilin-like domain superfamily, and Domain of unknown function DUF1989
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4643_Mixed,_incl._Cyclophilin-like_domain_superfamily,_and_Domain_of_unknown_function_DUF1989


id: CL:4645
description: Domain of unknown function DUF1989, and Amidase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4645_Domain_of_unknown_function_DUF1989,_and_Amidase


id: CL:466
description: Mixed, incl. Phosphotransferase system, EIIB component, type 2, and Mannitol dehydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:466_Mixed,_incl._Phosphotransferase_system,_EIIB_component,_type_2,_and_Mannitol_dehydrogenase


id: CL:4665
description: Mixed, incl. KDPG/KHG aldolase, and Calcium ion binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4665_Mixed,_incl._KDPG/KHG_aldolase,_and_Calcium_ion_binding


id: CL:4676
description: GntR, C-terminal, and Chromate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4676_GntR,_C-terminal,_and_Chromate_transport


id: CL:468
description: PTS EIIA type-2 domain, and Mannitol dehydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:468_PTS_EIIA_type-2_domain,_and_Mannitol_dehydrogenase


id: CL:4697
description: Mixed, incl. Single cache domain 3, and Bordetella uptake gene
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4697_Mixed,_incl._Single_cache_domain_3,_and_Bordetella_uptake_gene


id: CL:4698
description: Mixed, incl. Bordetella uptake gene, and Protein of unknown function DUF1468
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4698_Mixed,_incl._Bordetella_uptake_gene,_and_Protein_of_unknown_function_DUF1468


id: CL:4700
description: Mixed, incl. Bordetella uptake gene, and D-galactonate dehydratase DgoD-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4700_Mixed,_incl._Bordetella_uptake_gene,_and_D-galactonate_dehydratase_DgoD-like


id: CL:4712
description: Mixed, incl. Single cache domain 3, and Bordetella uptake gene
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4712_Mixed,_incl._Single_cache_domain_3,_and_Bordetella_uptake_gene


id: CL:4722
description: Mixed, incl. MutM-like, N-terminal, and Single cache domain 3
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4722_Mixed,_incl._MutM-like,_N-terminal,_and_Single_cache_domain_3


id: CL:4735
description: Mixed, incl. Dicarboxylic acid transport, and TRAP transporter solute receptor DctP
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4735_Mixed,_incl._Dicarboxylic_acid_transport,_and_TRAP_transporter_solute_receptor_DctP


id: CL:4737
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4737_Mixed,_incl._TRAP_transporter_solute_receptor_DctP,_and_TRAP_transporter_large_membrane_protein_DctM

description:
  Mixed, incl. TRAP transporter solute receptor DctP, and TRAP transporter large membrane protein DctM


id: CL:4739
description: TRAP transporter solute receptor, DctP family, and TRAP transporter large membrane protein DctM
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4739_TRAP_transporter_solute_receptor,_DctP_family,_and_TRAP_transporter_large_membrane_protein_DctM


id: CL:4767
description: Mixed, incl. Dicarboxylic acid transport, and NTF2-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4767_Mixed,_incl._Dicarboxylic_acid_transport,_and_NTF2-like_domain_superfamily


id: CL:4778
description: Mixed, incl. ABC transporters, and BCCT transporter family
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4778_Mixed,_incl._ABC_transporters,_and_BCCT_transporter_family


id: CL:4779
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4779_Mixed,_incl._ABC_transporter-like,_ATP-binding_domain,_and_ATP-binding_cassette_(ABC)_transporter_complex

description:
  Mixed, incl. ABC transporter-like, ATP-binding domain, and ATP-binding cassette (ABC) transporter complex


id: CL:4780
description: Mixed, incl. ABC transporter-like, ATP-binding domain, and ABC-2 transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4780_Mixed,_incl._ABC_transporter-like,_ATP-binding_domain,_and_ABC-2_transporter


id: CL:4781
description: Mixed, incl. Thiosulfate transport, and ABC-2 transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4781_Mixed,_incl._Thiosulfate_transport,_and_ABC-2_transporter


id: CL:4782
description: Mixed, incl. Thiosulfate transport, and ABC-2 transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4782_Mixed,_incl._Thiosulfate_transport,_and_ABC-2_transporter


id: CL:4784
description: Mixed, incl. Thiosulfate transport, and ABC-2 transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4784_Mixed,_incl._Thiosulfate_transport,_and_ABC-2_transporter


id: CL:4786
description: ABC-2 transporter, and Thiosulfate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4786_ABC-2_transporter,_and_Thiosulfate_transport


id: CL:4804
description: Mixed, incl. Protein splicing, and Phosphonate and phosphinate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4804_Mixed,_incl._Protein_splicing,_and_Phosphonate_and_phosphinate_metabolism


id: CL:4827
description: Mixed, incl. Drug resistance transporter EmrB-like, and Aminoacyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4827_Mixed,_incl._Drug_resistance_transporter_EmrB-like,_and_Aminoacyltransferase_activity


id: CL:4838
description: Mixed, incl. Peptide transport, and Nickel cation transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4838_Mixed,_incl._Peptide_transport,_and_Nickel_cation_transmembrane_transporter_activity


id: CL:4841
description: Peptide transport, and Nickel cation transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4841_Peptide_transport,_and_Nickel_cation_transmembrane_transporter_activity


id: CL:4863
description: Mixed, incl. BCCT transporter family, and Glycine betaine transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4863_Mixed,_incl._BCCT_transporter_family,_and_Glycine_betaine_transport


id: CL:4865
description: Mixed, incl. Glycine betaine transport, and BCCT transporter family
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4865_Mixed,_incl._Glycine_betaine_transport,_and_BCCT_transporter_family


id: CL:4868
description: Glycine betaine transport, and ABC-type glycine betaine transport system, substrate-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4868_Glycine_betaine_transport,_and_ABC-type_glycine_betaine_transport_system,_substrate-binding_domain


id: CL:4881
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4881_DNA_topoisomerase,_type_IIA-like_domain_superfamily,_and_LexA-binding,_inner_membrane-associated_putative_hydrolase

description:
  DNA topoisomerase, type IIA-like domain superfamily, and LexA-binding, inner membrane-associated putative hydrolase


id: CL:4899
description: Mixed, incl. Transition metal ion homeostasis, and Cell adhesion
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4899_Mixed,_incl._Transition_metal_ion_homeostasis,_and_Cell_adhesion


id: CL:4900
description: Iron ion homeostasis, and Two-component regulatory system
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4900_Iron_ion_homeostasis,_and_Two-component_regulatory_system


id: CL:4917
description: Siderophore-dependent iron import into cell, and Periplasmic binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4917_Siderophore-dependent_iron_import_into_cell,_and_Periplasmic_binding_protein


id: CL:492
description: Mixed, incl. Mga helix-turn-helix domain, and PTS system sugar-specific permease component
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:492_Mixed,_incl._Mga_helix-turn-helix_domain,_and_PTS_system_sugar-specific_permease_component


id: CL:4926
description: Mixed, incl. Two-component regulatory system, and Cobalamin metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4926_Mixed,_incl._Two-component_regulatory_system,_and_Cobalamin_metabolic_process


id: CL:4930
description: Mixed, incl. Cobalamin metabolic process, and Iron coordination entity transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4930_Mixed,_incl._Cobalamin_metabolic_process,_and_Iron_coordination_entity_transport


id: CL:4945
description: Mixed, incl. Cell adhesion, and ABC transporter, TroCD-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4945_Mixed,_incl._Cell_adhesion,_and_ABC_transporter,_TroCD-like


id: CL:4948
description: Adhesin B, and ABC transporter, TroCD-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4948_Adhesin_B,_and_ABC_transporter,_TroCD-like


id: CL:4961
description: Mixed, incl. Cobalamin metabolic process, and Pyridine nucleotide-disulphide oxidoreductase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4961_Mixed,_incl._Cobalamin_metabolic_process,_and_Pyridine_nucleotide-disulphide_oxidoreductase


id: CL:4971
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4971_Mostly_uncharacterized,_incl._Transition_metal_ion_transport,_and_Helix_turn_helix,_Arsenical_Resistance_Operon_Repressor

description:
  Mostly uncharacterized, incl. Transition metal ion transport, and Helix_turn_helix, Arsenical Resistance Operon Repressor


id: CL:4972
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4972_Mostly_uncharacterized,_incl._E1-E2_ATPase,_and_Helix_turn_helix,_Arsenical_Resistance_Operon_Repressor

description:
  Mostly uncharacterized, incl. E1-E2 ATPase, and Helix_turn_helix, Arsenical Resistance Operon Repressor


id: CL:4973
description: Mixed, incl. E1-E2 ATPase, and Helix_turn_helix, Arsenical Resistance Operon Repressor
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4973_Mixed,_incl._E1-E2_ATPase,_and_Helix_turn_helix,_Arsenical_Resistance_Operon_Repressor


id: CL:4975
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4975_Mixed,_incl._Response_to_arsenic-containing_substance,_and_Helix_turn_helix,_Arsenical_Resistance_Operon_Repressor

description:
  Mixed, incl. Response to arsenic-containing substance, and Helix_turn_helix, Arsenical Resistance Operon Repressor


id: CL:4978
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4978_Response_to_arsenic-containing_substance,_and_Helix_turn_helix,_Arsenical_Resistance_Operon_Repressor

description:
  Response to arsenic-containing substance, and Helix_turn_helix, Arsenical Resistance Operon Repressor


id: CL:4993
description: Helix-turn-helix XRE-family like proteins, and Response to cadmium ion
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:4993_Helix-turn-helix_XRE-family_like_proteins,_and_Response_to_cadmium_ion


id: CL:5009
description: Mixed, incl. E1-E2 ATPase, and Metal-sensitive transcriptional repressor
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:5009_Mixed,_incl._E1-E2_ATPase,_and_Metal-sensitive_transcriptional_repressor


id: CL:5012
description: E1-E2 ATPase, and Heavy metal-associated domain, copper ion-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:5012_E1-E2_ATPase,_and_Heavy_metal-associated_domain,_copper_ion-binding


id: CL:5030
description: Metal-sensitive transcriptional repressor, and Enzyme inhibitor activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:5030_Metal-sensitive_transcriptional_repressor,_and_Enzyme_inhibitor_activity


id: CL:504
description: DeoR C-terminal sensor domain, and Hexose transmembrane transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:504_DeoR_C-terminal_sensor_domain,_and_Hexose_transmembrane_transport


id: CL:5043
description: Mixed, incl. PepSY domain, and Response to toxic substance
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:5043_Mixed,_incl._PepSY_domain,_and_Response_to_toxic_substance


id: CL:5055
description: Mostly uncharacterized, incl. DoxX family, and Dipeptide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:5055_Mostly_uncharacterized,_incl._DoxX_family,_and_Dipeptide_transport


id: CL:5056
description: Mixed, incl. DoxX family, and UDP-N-acetylglucosamine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:5056_Mixed,_incl._DoxX_family,_and_UDP-N-acetylglucosamine_metabolic_process


id: CL:5069
description: Mixed, incl. Dipeptide transport, and Cobalt ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:5069_Mixed,_incl._Dipeptide_transport,_and_Cobalt_ion_transport


id: CL:5080
description: Mixed, incl. Queuosine biosynthesis, and Potassium ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:5080_Mixed,_incl._Queuosine_biosynthesis,_and_Potassium_ion_transport


id: CL:5081
description: Mixed, incl. Queuosine biosynthesis, and IDEAL domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:5081_Mixed,_incl._Queuosine_biosynthesis,_and_IDEAL_domain


id: CL:5083
description: Queuosine biosynthesis, and dUTP metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:5083_Queuosine_biosynthesis,_and_dUTP_metabolic_process


id: CL:5097
description: Mixed, incl. Armadillo-type fold, and lysyl-tRNA aminoacylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:5097_Mixed,_incl._Armadillo-type_fold,_and_lysyl-tRNA_aminoacylation


id: CL:5106
description: Potassium ion transport, and SHOCT domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:5106_Potassium_ion_transport,_and_SHOCT_domain


id: CL:5108
description: Cation transporter, and Regulator of K+ conductance, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:5108_Cation_transporter,_and_Regulator_of_K+_conductance,_N-terminal


id: CL:5127
description: Mostly uncharacterized, incl. Bacterial exopeptidase dimerisation domain, and Manganese catalase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:5127_Mostly_uncharacterized,_incl._Bacterial_exopeptidase_dimerisation_domain,_and_Manganese_catalase


id: CL:5129
description: Mixed, incl. Bacterial exopeptidase dimerisation domain, and Manganese catalase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:5129_Mixed,_incl._Bacterial_exopeptidase_dimerisation_domain,_and_Manganese_catalase


id: CL:5131
description: Mixed, incl. Bacterial exopeptidase dimerisation domain, and Dipeptide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:5131_Mixed,_incl._Bacterial_exopeptidase_dimerisation_domain,_and_Dipeptide_transport


id: CL:5133
description: Amidohydrolase, and Dipeptide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:5133_Amidohydrolase,_and_Dipeptide_transport


id: CL:514
description: Mixed, incl. Glycolytic process, and Pentose phosphate pathway
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:514_Mixed,_incl._Glycolytic_process,_and_Pentose_phosphate_pathway


id: CL:515
description: Mixed, incl. Glycolytic process, and NADPH regeneration
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:515_Mixed,_incl._Glycolytic_process,_and_NADPH_regeneration


id: CL:5154
description: Mixed, incl. Manganese catalase, and Protein of unknown function DUF326
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:5154_Mixed,_incl._Manganese_catalase,_and_Protein_of_unknown_function_DUF326


id: CL:516
description: Mixed, incl. Glycolytic process, and NADPH regeneration
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:516_Mixed,_incl._Glycolytic_process,_and_NADPH_regeneration


id: CL:5169
description: Mixed, incl. Histidine metabolism, and CopC domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:5169_Mixed,_incl._Histidine_metabolism,_and_CopC_domain


id: CL:5171
description: Mixed, incl. CopC domain, and DinB superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:5171_Mixed,_incl._CopC_domain,_and_DinB_superfamily


id: CL:518
description: Glycolytic process, and NADPH regeneration
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:518_Glycolytic_process,_and_NADPH_regeneration


id: CL:5193
description: Mixed, incl. Bacterial PH domain, and Histidinol-phosphatase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:5193_Mixed,_incl._Bacterial_PH_domain,_and_Histidinol-phosphatase_activity


id: CL:5195
description: Mixed, incl. Bacterial PH domain, and Antioxidant
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:5195_Mixed,_incl._Bacterial_PH_domain,_and_Antioxidant


id: CL:5197
description: Mixed, incl. Antioxidant, and LonB-like, AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:5197_Mixed,_incl._Antioxidant,_and_LonB-like,_AAA_domain


id: CL:521
description: Phosphofructokinase, and Alkali metal ion binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:521_Phosphofructokinase,_and_Alkali_metal_ion_binding


id: CL:5238
description: Sodium/solute symporter superfamily, and Import across plasma membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:5238_Sodium/solute_symporter_superfamily,_and_Import_across_plasma_membrane


id: CL:5260
description: Mixed, incl. Na+/Pi-cotransporter, and Response to herbicide
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:5260_Mixed,_incl._Na+/Pi-cotransporter,_and_Response_to_herbicide


id: CL:5273
description: Mixed, incl. Primosome complex, and Prolyl oligopeptidase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:5273_Mixed,_incl._Primosome_complex,_and_Prolyl_oligopeptidase_family


id: CL:5275
description: Mixed, incl. Prolyl oligopeptidase family, and Trp repressor/replication initiator
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:5275_Mixed,_incl._Prolyl_oligopeptidase_family,_and_Trp_repressor/replication_initiator


id: CL:5302
description: Mixed, incl. UspA, and Dipeptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:5302_Mixed,_incl._UspA,_and_Dipeptidase_activity


id: CL:5305
description: UspA, and Protein carboxylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:5305_UspA,_and_Protein_carboxylation


id: CL:5309
description: Universal stress protein A family
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:5309_Universal_stress_protein_A_family


id: CL:5344
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:5344_Mixed,_incl._Lactone_catabolic_process,_and_HPr(Ser)_kinase/phosphorylase-like,_N-terminal_domain_superfamily

description:
  Mixed, incl. Lactone catabolic process, and HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily


id: CL:5357
description: Mixed, incl. HSP20-like chaperone, and Glycosyl transferase family 8
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:5357_Mixed,_incl._HSP20-like_chaperone,_and_Glycosyl_transferase_family_8


id: CL:5375
description: Mostly uncharacterized, incl. Cell death, and Putative fluoride ion transporter CrcB
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:5375_Mostly_uncharacterized,_incl._Cell_death,_and_Putative_fluoride_ion_transporter_CrcB


id: CL:5376
description: Mixed, incl. Thioredoxin-like superfamily, and IDEAL domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:5376_Mixed,_incl._Thioredoxin-like_superfamily,_and_IDEAL_domain


id: CL:5377
description: Mixed, incl. Thioredoxin-like superfamily, and Lactate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:5377_Mixed,_incl._Thioredoxin-like_superfamily,_and_Lactate_transport


id: CL:5378
description: Mixed, incl. ArsC family, and Gfo/Idh/MocA-like oxidoreductase, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:5378_Mixed,_incl._ArsC_family,_and_Gfo/Idh/MocA-like_oxidoreductase,_N-terminal


id: CL:5389
description: Mixed, incl. Lactate transport, and Membrane transport protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:5389_Mixed,_incl._Lactate_transport,_and_Membrane_transport_protein


id: CL:5400
description: Mixed, incl. IDEAL domain, and Winged helix-turn-helix transcription repressor, HrcA DNA-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:5400_Mixed,_incl._IDEAL_domain,_and_Winged_helix-turn-helix_transcription_repressor,_HrcA_DNA-binding


id: CL:5416
description: Cell death, and Regulation of cell communication
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:5416_Cell_death,_and_Regulation_of_cell_communication


id: CL:5433
description: Mixed, incl. Major facilitator superfamily, and Gated channel activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:5433_Mixed,_incl._Major_facilitator_superfamily,_and_Gated_channel_activity


id: CL:5435
description: Transmembrane secretion effector, and Major Facilitator Superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:5435_Transmembrane_secretion_effector,_and_Major_Facilitator_Superfamily


id: CL:5450
description: Mixed, incl. Peptidase M42, domain 2, and Drug resistance transporter Bcr/CmlA subfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:5450_Mixed,_incl._Peptidase_M42,_domain_2,_and_Drug_resistance_transporter_Bcr/CmlA_subfamily


id: CL:5467
description: Mixed, incl. Cell motility, and tRNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:5467_Mixed,_incl._Cell_motility,_and_tRNA-binding_domain


id: CL:5476
description: Mixed, incl. Neutral amino acid transport, and Na+/H+ antiporter family
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:5476_Mixed,_incl._Neutral_amino_acid_transport,_and_Na+/H+_antiporter_family


id: CL:5478
description: Mixed, incl. Amino-acid transport, and EamA-like transporter family
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:5478_Mixed,_incl._Amino-acid_transport,_and_EamA-like_transporter_family


id: CL:5496
description: Mixed, incl. Na+/H+ antiporter family, and Nucleoside recognition
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:5496_Mixed,_incl._Na+/H+_antiporter_family,_and_Nucleoside_recognition


id: CL:550
description: Mixed, incl. Nucleotidyl transferase domain, and ROK family
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:550_Mixed,_incl._Nucleotidyl_transferase_domain,_and_ROK_family


id: CL:5510
description: Mixed, incl. Vesicle, and Gas vesicle protein GvpO
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:5510_Mixed,_incl._Vesicle,_and_Gas_vesicle_protein_GvpO


id: CL:5514
description: Mixed, incl. Vesicle, and Gas vesicle protein GvpO
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:5514_Mixed,_incl._Vesicle,_and_Gas_vesicle_protein_GvpO


id: CL:5517
description: Gas vesicle protein GvpL/GvpF, and Vesicle
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:5517_Gas_vesicle_protein_GvpL/GvpF,_and_Vesicle


id: CL:5552
description: Mixed, incl. HxlR-like helix-turn-helix, and NADPH-dependent FMN reductase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:5552_Mixed,_incl._HxlR-like_helix-turn-helix,_and_NADPH-dependent_FMN_reductase


id: CL:5553
description: Mixed, incl. HxlR-like helix-turn-helix, and Flavoprotein WrbA-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:5553_Mixed,_incl._HxlR-like_helix-turn-helix,_and_Flavoprotein_WrbA-like


id: CL:5581
description: Mostly uncharacterized, incl. Na+/Pi-cotransporter, and Capsule synthesis protein, CapA
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:5581_Mostly_uncharacterized,_incl._Na+/Pi-cotransporter,_and_Capsule_synthesis_protein,_CapA


id: CL:5583
description: Mixed, incl. Na+/Pi-cotransporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:5583_Mixed,_incl._Na+/Pi-cotransporter


id: CL:5599
description: Mixed, incl. Phenazine biosynthesis PhzF protein, and Sodium/solute symporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:5599_Mixed,_incl._Phenazine_biosynthesis_PhzF_protein,_and_Sodium/solute_symporter


id: CL:5610
description: Mostly uncharacterized, incl. Glycosyl transferase family 8
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:5610_Mostly_uncharacterized,_incl._Glycosyl_transferase_family_8


id: CL:5634
description: Mixed, incl. Protein of unknown function DUF3942, and Aldo-keto reductase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:5634_Mixed,_incl._Protein_of_unknown_function_DUF3942,_and_Aldo-keto_reductase


id: CL:565
description: Amino sugar catabolic process, and UbiC transcription regulator-associated
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:565_Amino_sugar_catabolic_process,_and_UbiC_transcription_regulator-associated


id: CL:5670
description: Mostly uncharacterized, incl. STAS domain superfamily, and Universal stress protein A family
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:5670_Mostly_uncharacterized,_incl._STAS_domain_superfamily,_and_Universal_stress_protein_A_family


id: CL:575
description: Glucuronate catabolic process, and KDPG/KHG aldolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:575_Glucuronate_catabolic_process,_and_KDPG/KHG_aldolase


id: CL:587
description: Periplasmic binding protein-like I, and Amine-lyase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:587_Periplasmic_binding_protein-like_I,_and_Amine-lyase_activity


id: CL:610
description: Galactose metabolic process, and Galactosidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:610_Galactose_metabolic_process,_and_Galactosidase_activity


id: CL:633
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:633_Mixed,_incl._Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_NAD_or_NADP_as_acceptor,_and_Gfo/Idh/MocA-like_oxidoreductase,_C-terminal

description:
  Mixed, incl. Oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, and Gfo/Idh/MocA-like oxidoreductase, C-terminal


id: CL:635
description: Gfo/Idh/MocA-like oxidoreductase, C-terminal, and Xylose isomerase-like, TIM barrel domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:635_Gfo/Idh/MocA-like_oxidoreductase,_C-terminal,_and_Xylose_isomerase-like,_TIM_barrel_domain


id: CL:636
description: Gfo/Idh/MocA-like oxidoreductase, C-terminal, and Xylose isomerase-like TIM barrel
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:636_Gfo/Idh/MocA-like_oxidoreductase,_C-terminal,_and_Xylose_isomerase-like_TIM_barrel


id: CL:637
description: Mixed, incl. Inositol catabolic process, and Inositol 2-dehydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:637_Mixed,_incl._Inositol_catabolic_process,_and_Inositol_2-dehydrogenase


id: CL:640
description: Inositol catabolic process, and Inositol 2-dehydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:640_Inositol_catabolic_process,_and_Inositol_2-dehydrogenase


id: CL:656
description: Xylose isomerase-like TIM barrel, and Oxidoreductase family, C-terminal alpha/beta domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:656_Xylose_isomerase-like_TIM_barrel,_and_Oxidoreductase_family,_C-terminal_alpha/beta_domain


id: CL:666
description: Oxidoreductase family, C-terminal alpha/beta domain, and Xylose isomerase-like TIM barrel
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:666_Oxidoreductase_family,_C-terminal_alpha/beta_domain,_and_Xylose_isomerase-like_TIM_barrel


id: CL:683
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:683_Mixed,_incl._Aldehyde_dehydrogenase_domain,_and_Alcohol_dehydrogenase,_iron-type/glycerol_dehydrogenase_GldA

description:
  Mixed, incl. Aldehyde dehydrogenase domain, and Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA


id: CL:685
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:685_Mixed,_incl._Alcohol_dehydrogenase,_iron-type/glycerol_dehydrogenase_GldA,_and_Aldehyde_dehydrogenase_family

description:
  Mixed, incl. Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA, and Aldehyde dehydrogenase family


id: CL:686
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:686_Alcohol_dehydrogenase,_iron-type/glycerol_dehydrogenase_GldA,_and_Alcohol_dehydrogenase,_zinc-type,_conserved_site

description:
  Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA, and Alcohol dehydrogenase, zinc-type, conserved site


id: CL:688
description: Choline metabolic process, and Alcohol dehydrogenase, zinc-type, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:688_Choline_metabolic_process,_and_Alcohol_dehydrogenase,_zinc-type,_conserved_site


id: CL:710
description: Aldehyde dehydrogenase family, and FAD-linked oxidoreductase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:710_Aldehyde_dehydrogenase_family,_and_FAD-linked_oxidoreductase-like


id: CL:730
description: Mixed, incl. Glycerol metabolic process, and Major intrinsic protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:730_Mixed,_incl._Glycerol_metabolic_process,_and_Major_intrinsic_protein


id: CL:733
description: Glycerol metabolism, and Major intrinsic protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:733_Glycerol_metabolism,_and_Major_intrinsic_protein


id: CL:751
description: Mixed, incl. Glycerone kinase activity, and DinB/YfiT-like putative metalloenzymes
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:751_Mixed,_incl._Glycerone_kinase_activity,_and_DinB/YfiT-like_putative_metalloenzymes


id: CL:771
description: Biosynthesis of amino acids, and Folic acid-containing compound biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:771_Biosynthesis_of_amino_acids,_and_Folic_acid-containing_compound_biosynthetic_process


id: CL:773
description: Amino-acid biosynthesis, and Folic acid-containing compound biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:773_Amino-acid_biosynthesis,_and_Folic_acid-containing_compound_biosynthetic_process


id: CL:774
description: Mixed, incl. Branched-chain amino acid metabolic process, and Lysine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:774_Mixed,_incl._Branched-chain_amino_acid_metabolic_process,_and_Lysine_biosynthesis


id: CL:775
description: Branched-chain amino acid metabolic process, and Lysine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:775_Branched-chain_amino_acid_metabolic_process,_and_Lysine_biosynthesis


id: CL:778
description: Branched-chain amino acid metabolic process, and Serine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:778_Branched-chain_amino_acid_metabolic_process,_and_Serine_biosynthesis


id: CL:782
description: Threonine biosynthetic process, and Serine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:782_Threonine_biosynthetic_process,_and_Serine_biosynthesis


id: CL:80
description: Mixed, incl. Carbon metabolism, and Fatty acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:80_Mixed,_incl._Carbon_metabolism,_and_Fatty_acid_metabolic_process


id: CL:800
description: Branched-chain amino acid biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:800_Branched-chain_amino_acid_biosynthesis


id: CL:81
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:81_Mixed,_incl._Citrate_cycle_(TCA_cycle),_and_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors

description:
  Mixed, incl. Citrate cycle (TCA cycle), and Oxidoreductase activity, acting on the CH-NH2 group of donors


id: CL:82
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:82_Mixed,_incl._Citrate_cycle_(TCA_cycle),_and_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors

description:
  Mixed, incl. Citrate cycle (TCA cycle), and Oxidoreductase activity, acting on the CH-NH2 group of donors


id: CL:823
description: Lysine biosynthesis, and Aspartate kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:823_Lysine_biosynthesis,_and_Aspartate_kinase


id: CL:825
description: Lysine biosynthesis, and Aspartate kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:825_Lysine_biosynthesis,_and_Aspartate_kinase


id: CL:84
description: Mixed, incl. Citrate cycle (TCA cycle), and Thiamin diphosphate-binding fold
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:84_Mixed,_incl._Citrate_cycle_(TCA_cycle),_and_Thiamin_diphosphate-binding_fold


id: CL:847
description: Mixed, incl. CdaR, GGDEF-like domain, and Homoserine dehydrogenase, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:847_Mixed,_incl._CdaR,_GGDEF-like_domain,_and_Homoserine_dehydrogenase,_conserved_site


id: CL:85
description: Citrate cycle (TCA cycle), and Thiamin diphosphate-binding fold
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:85_Citrate_cycle_(TCA_cycle),_and_Thiamin_diphosphate-binding_fold


id: CL:859
description: Aromatic amino acid family biosynthetic process, and Histidine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:859_Aromatic_amino_acid_family_biosynthetic_process,_and_Histidine_biosynthesis


id: CL:86
description: Tricarboxylic acid cycle, and acetyl-CoA metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:86_Tricarboxylic_acid_cycle,_and_acetyl-CoA_metabolic_process


id: CL:860
description: Aromatic amino acid family biosynthetic process, and Histidine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:860_Aromatic_amino_acid_family_biosynthetic_process,_and_Histidine_biosynthesis


id: CL:861
description: Aromatic amino acid family biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:861_Aromatic_amino_acid_family_biosynthetic_process


id: CL:87
description: Tricarboxylic acid cycle, and ICL/PEPM domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:87_Tricarboxylic_acid_cycle,_and_ICL/PEPM_domain


id: CL:88
description: Tricarboxylic acid cycle, and Rieske [2Fe-2S] domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:88_Tricarboxylic_acid_cycle,_and_Rieske_[2Fe-2S]_domain


id: CL:894
description: Histidine biosynthesis, and Inorganic diphosphatase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:894_Histidine_biosynthesis,_and_Inorganic_diphosphatase_activity


id: CL:91
description: CoA-ligase, and Glucose inhibited division protein A
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:91_CoA-ligase,_and_Glucose_inhibited_division_protein_A


id: CL:919
description: Folic acid-containing compound biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:919_Folic_acid-containing_compound_biosynthetic_process


id: CL:939
description: Mixed, incl. Sulfur amino acid metabolic process, and Ribonuclease III family
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:939_Mixed,_incl._Sulfur_amino_acid_metabolic_process,_and_Ribonuclease_III_family


id: CL:940
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:940_Mixed,_incl._Methionine_metabolic_process,_and_Cys/Met_metabolism,_pyridoxal_phosphate-dependent_enzyme

description:
  Mixed, incl. Methionine metabolic process, and Cys/Met metabolism, pyridoxal phosphate-dependent enzyme


id: CL:942
description: S-methyltransferase activity, and Homoserine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:942_S-methyltransferase_activity,_and_Homoserine_metabolic_process


id: CL:945
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:945_Cobalamin-independent_methionine_synthase_MetE,_C-terminal/archaeal,_and_Homocysteine-binding_domain

description:
  Cobalamin-independent methionine synthase MetE, C-terminal/archaeal, and Homocysteine-binding domain


id: CL:972
description: Cysteine biosynthetic process from serine
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:972_Cysteine_biosynthetic_process_from_serine


id: CL:988
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:988_Nucleobase-containing_small_molecule_metabolic_process,_and_Glutamine_family_amino_acid_biosynthetic_process

description:
  Nucleobase-containing small molecule metabolic process, and Glutamine family amino acid biosynthetic process


id: CL:989
description: Mixed, incl. Ribonucleoside monophosphate metabolic process, and Nucleobase metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:989_Mixed,_incl._Ribonucleoside_monophosphate_metabolic_process,_and_Nucleobase_metabolic_process


id: CL:991
description: Ribonucleoside monophosphate metabolic process, and Arginine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:991_Ribonucleoside_monophosphate_metabolic_process,_and_Arginine_biosynthesis


id: CL:992
description: Mixed, incl. Arginine biosynthetic process, and De novo UMP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:992_Mixed,_incl._Arginine_biosynthetic_process,_and_De_novo_UMP_biosynthetic_process


id: CL:993
description: Arginine biosynthetic process, and De novo UMP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122204_STRINGid_CL:993_Arginine_biosynthetic_process,_and_De_novo_UMP_biosynthetic_process


id: GO:0000122
description: Negative regulation of transcription by RNA polymerase II
memo: https://amigo.geneontology.org/amigo/term/GO:0000122
golevel: 10
name:
  GOBP.STRING_v12.0_1122204_STRINGid_GO:0000122_Negative_regulation_of_transcription_by_RNA_polymerase_II


id: GO:0000701
description: Purine-specific mismatch base pair DNA N-glycosylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0000701
golevel: 6
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0000701_Purine-specific_mismatch_base_pair_DNA_N-glycosylase_activity


id: GO:0000716
description: Transcription-coupled nucleotide-excision repair, DNA damage recognition
memo: https://amigo.geneontology.org/amigo/term/GO:0000716
golevel: 7
name:
  GOBP.STRING_v12.0_1122204_STRINGid_GO:0000716_Transcription-coupled_nucleotide-excision_repair,_DNA_damage_recognition


id: GO:0000724
description: Double-strand break repair via homologous recombination
memo: https://amigo.geneontology.org/amigo/term/GO:0000724
golevel: 7
name:
  GOBP.STRING_v12.0_1122204_STRINGid_GO:0000724_Double-strand_break_repair_via_homologous_recombination


id: GO:0000977
description: RNA polymerase II transcription regulatory region sequence-specific DNA binding
memo: https://amigo.geneontology.org/amigo/term/GO:0000977
golevel: 5
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0000977_RNA_polymerase_II_transcription_regulatory_region_sequence-specific_DNA_binding


id: GO:0000981
description: DNA-binding transcription factor activity, RNA polymerase II-specific
memo: https://amigo.geneontology.org/amigo/term/GO:0000981
golevel: 3
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0000981_DNA-binding_transcription_factor_activity,_RNA_polymerase_II-specific


id: GO:0001073
description: Transcription antitermination factor activity, DNA binding
memo: https://amigo.geneontology.org/amigo/term/GO:0001073
golevel: 2
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0001073_Transcription_antitermination_factor_activity,_DNA_binding


id: GO:0001227
description: DNA-binding transcription repressor activity, RNA polymerase II-specific
memo: https://amigo.geneontology.org/amigo/term/GO:0001227
golevel: 4
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0001227_DNA-binding_transcription_repressor_activity,_RNA_polymerase_II-specific


id: GO:0003848
description: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003848
golevel: 5
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0003848_2-amino-4-hydroxy-6-hydroxymethyldihydropteridine_diphosphokinase_activity


id: GO:0003864
description: 3-methyl-2-oxobutanoate hydroxymethyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003864
golevel: 5
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0003864_3-methyl-2-oxobutanoate_hydroxymethyltransferase_activity


id: GO:0003871
description: 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003871
golevel: 6
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0003871_5-methyltetrahydropteroyltriglutamate-homocysteine_S-methyltransferase_activity


id: GO:0003906
description: DNA-(apurinic or apyrimidinic site) endonuclease activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003906
golevel: 6
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0003906_DNA-(apurinic_or_apyrimidinic_site)_endonuclease_activity


id: GO:0003908
description: methylated-DNA-[protein]-cysteine S-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003908
golevel: 4
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0003908_methylated-DNA-[protein]-cysteine_S-methyltransferase_activity


id: GO:0003917
description: DNA topoisomerase type I (single strand cut, ATP-independent) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003917
golevel: 5
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0003917_DNA_topoisomerase_type_I_(single_strand_cut,_ATP-independent)_activity


id: GO:0003918
description: DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003918
golevel: 3
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0003918_DNA_topoisomerase_type_II_(double_strand_cut,_ATP-hydrolyzing)_activity


id: GO:0003949
memo: https://amigo.geneontology.org/amigo/term/GO:0003949
golevel: 5
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0003949_1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide_isomerase_activity

description:
  1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity


id: GO:0004018
description: N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004018
golevel: 5
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0004018_N6-(1,2-dicarboxyethyl)AMP_AMP-lyase_(fumarate-forming)_activity


id: GO:0004081
description: bis(5-nucleosyl)-tetraphosphatase (asymmetrical) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004081
golevel: 7
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0004081_bis(5-nucleosyl)-tetraphosphatase_(asymmetrical)_activity


id: GO:0004088
description: Carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004088
golevel: 5
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0004088_Carbamoyl-phosphate_synthase_(glutamine-hydrolyzing)_activity


id: GO:0004317
description: 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004317
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0004317_3-hydroxypalmitoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0004318
description: Enoyl-[acyl-carrier-protein] reductase (NADH) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004318
golevel: 6
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0004318_Enoyl-[acyl-carrier-protein]_reductase_(NADH)_activity


id: GO:0004360
description: glutamine-fructose-6-phosphate transaminase (isomerizing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004360
golevel: 6
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0004360_glutamine-fructose-6-phosphate_transaminase_(isomerizing)_activity


id: GO:0004471
description: Malate dehydrogenase (decarboxylating) (NAD+) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004471
golevel: 5
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0004471_Malate_dehydrogenase_(decarboxylating)_(NAD+)_activity


id: GO:0004486
description: Methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004486
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0004486_Methylenetetrahydrofolate_dehydrogenase_[NAD(P)+]_activity


id: GO:0004488
description: Methylenetetrahydrofolate dehydrogenase (NADP+) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004488
golevel: 5
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0004488_Methylenetetrahydrofolate_dehydrogenase_(NADP+)_activity


id: GO:0004489
description: Methylenetetrahydrofolate reductase (NAD(P)H) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004489
golevel: 5
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0004489_Methylenetetrahydrofolate_reductase_(NAD(P)H)_activity


id: GO:0004514
description: Nicotinate-nucleotide diphosphorylase (carboxylating) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004514
golevel: 5
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0004514_Nicotinate-nucleotide_diphosphorylase_(carboxylating)_activity


id: GO:0004591
description: Oxoglutarate dehydrogenase (succinyl-transferring) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004591
golevel: 5
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0004591_Oxoglutarate_dehydrogenase_(succinyl-transferring)_activity


id: GO:0004604
description: Phosphoadenylyl-sulfate reductase (thioredoxin) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004604
golevel: 5
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0004604_Phosphoadenylyl-sulfate_reductase_(thioredoxin)_activity


id: GO:0004616
description: Phosphogluconate dehydrogenase (decarboxylating) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004616
golevel: 5
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0004616_Phosphogluconate_dehydrogenase_(decarboxylating)_activity


id: GO:0004639
description: Phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004639
golevel: 5
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0004639_Phosphoribosylaminoimidazolesuccinocarboxamide_synthase_activity


id: GO:0004641
description: Phosphoribosylformylglycinamidine cyclo-ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004641
golevel: 5
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0004641_Phosphoribosylformylglycinamidine_cyclo-ligase_activity


id: GO:0004643
description: Phosphoribosylaminoimidazolecarboxamide formyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004643
golevel: 5
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0004643_Phosphoribosylaminoimidazolecarboxamide_formyltransferase_activity


id: GO:0004648
description: O-phospho-L-serine:2-oxoglutarate aminotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004648
golevel: 5
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0004648_O-phospho-L-serine:2-oxoglutarate_aminotransferase_activity


id: GO:0004715
description: Non-membrane spanning protein tyrosine kinase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004715
golevel: 5
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0004715_Non-membrane_spanning_protein_tyrosine_kinase_activity


id: GO:0004719
description: protein-L-isoaspartate (D-aspartate) O-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004719
golevel: 5
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0004719_protein-L-isoaspartate_(D-aspartate)_O-methyltransferase_activity


id: GO:0004748
description: Ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0004748
golevel: 6
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0004748_Ribonucleoside-diphosphate_reductase_activity,_thioredoxin_disulfide_as_acceptor


id: GO:0005315
description: Inorganic phosphate transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0005315
golevel: 5
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0005315_Inorganic_phosphate_transmembrane_transporter_activity


id: GO:0005477
description: Pyruvate secondary active transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0005477
golevel: 6
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0005477_Pyruvate_secondary_active_transmembrane_transporter_activity


id: GO:0006490
description: Oligosaccharide-lipid intermediate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0006490
name:
  GOBP.STRING_v12.0_1122204_STRINGid_GO:0006490_Oligosaccharide-lipid_intermediate_biosynthetic_process


id: GO:0006515
description: Protein quality control for misfolded or incompletely synthesized proteins
memo: https://amigo.geneontology.org/amigo/term/GO:0006515
golevel: 7
name:
  GOBP.STRING_v12.0_1122204_STRINGid_GO:0006515_Protein_quality_control_for_misfolded_or_incompletely_synthesized_proteins


id: GO:0006614
description: SRP-dependent cotranslational protein targeting to membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0006614
golevel: 6
name:
  GOBP.STRING_v12.0_1122204_STRINGid_GO:0006614_SRP-dependent_cotranslational_protein_targeting_to_membrane


id: GO:0007156
description: Homophilic cell adhesion via plasma membrane adhesion molecules
memo: https://amigo.geneontology.org/amigo/term/GO:0007156
golevel: 4
name:
  GOBP.STRING_v12.0_1122204_STRINGid_GO:0007156_Homophilic_cell_adhesion_via_plasma_membrane_adhesion_molecules


id: GO:0007157
description: Heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules
memo: https://amigo.geneontology.org/amigo/term/GO:0007157
golevel: 4
name:
  GOBP.STRING_v12.0_1122204_STRINGid_GO:0007157_Heterophilic_cell-cell_adhesion_via_plasma_membrane_cell_adhesion_molecules


id: GO:0008028
description: Monocarboxylic acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008028
golevel: 4
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0008028_Monocarboxylic_acid_transmembrane_transporter_activity


id: GO:0008108
description: UDP-glucose:hexose-1-phosphate uridylyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008108
golevel: 6
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0008108_UDP-glucose:hexose-1-phosphate_uridylyltransferase_activity


id: GO:0008124
description: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008124
golevel: 5
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0008124_4-alpha-hydroxytetrahydrobiopterin_dehydratase_activity


id: GO:0008271
description: Secondary active sulfate transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008271
golevel: 5
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0008271_Secondary_active_sulfate_transmembrane_transporter_activity


id: GO:0008444
description: CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008444
golevel: 6
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0008444_CDP-diacylglycerol-glycerol-3-phosphate_3-phosphatidyltransferase_activity


id: GO:0008534
description: Oxidized purine nucleobase lesion DNA N-glycosylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008534
golevel: 6
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0008534_Oxidized_purine_nucleobase_lesion_DNA_N-glycosylase_activity


id: GO:0008659
description: (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008659
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0008659_(3R)-hydroxymyristoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0008685
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008685
golevel: 4
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0008685_2-C-methyl-D-erythritol_2,4-cyclodiphosphate_synthase_activity


id: GO:0008686
description: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008686
golevel: 4
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0008686_3,4-dihydroxy-2-butanone-4-phosphate_synthase_activity


id: GO:0008693
description: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008693
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0008693_3-hydroxydecanoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0008703
description: 5-amino-6-(5-phosphoribosylamino)uracil reductase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008703
golevel: 5
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0008703_5-amino-6-(5-phosphoribosylamino)uracil_reductase_activity


id: GO:0008757
description: S-adenosylmethionine-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008757
golevel: 5
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0008757_S-adenosylmethionine-dependent_methyltransferase_activity


id: GO:0008760
description: UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008760
golevel: 4
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0008760_UDP-N-acetylglucosamine_1-carboxyvinyltransferase_activity


id: GO:0008764
description: UDP-N-acetylmuramoylalanine-D-glutamate ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008764
golevel: 5
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0008764_UDP-N-acetylmuramoylalanine-D-glutamate_ligase_activity


id: GO:0008765
description: UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008765
golevel: 5
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0008765_UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate_ligase_activity


id: GO:0008766
description: UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008766
golevel: 5
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0008766_UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine_ligase_activity


id: GO:0008817
description: cob(I)yrinic acid a,c-diamide adenosyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008817
golevel: 4
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0008817_cob(I)yrinic_acid_a,c-diamide_adenosyltransferase_activity


id: GO:0008835
description: Diaminohydroxyphosphoribosylaminopyrimidine deaminase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008835
golevel: 5
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0008835_Diaminohydroxyphosphoribosylaminopyrimidine_deaminase_activity


id: GO:0008961
description: Phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008961
golevel: 3
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0008961_Phosphatidylglycerol-prolipoprotein_diacylglyceryl_transferase_activity


id: GO:0008963
description: phospho-N-acetylmuramoyl-pentapeptide-transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008963
golevel: 5
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0008963_phospho-N-acetylmuramoyl-pentapeptide-transferase_activity


id: GO:0008965
description: Phosphoenolpyruvate-protein phosphotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008965
golevel: 5
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0008965_Phosphoenolpyruvate-protein_phosphotransferase_activity


id: GO:0008982
description: protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008982
golevel: 4
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0008982_protein-N(PI)-phosphohistidine-sugar_phosphotransferase_activity


id: GO:0008999
description: Ribosomal protein S5-alanine N-acetyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008999
golevel: 6
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0008999_Ribosomal_protein_S5-alanine_N-acetyltransferase_activity


id: GO:0009095
description: Aromatic amino acid family biosynthetic process, prephenate pathway
memo: https://amigo.geneontology.org/amigo/term/GO:0009095
golevel: 7
name:
  GOBP.STRING_v12.0_1122204_STRINGid_GO:0009095_Aromatic_amino_acid_family_biosynthetic_process,_prephenate_pathway


id: GO:0009130
description: Pyrimidine nucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009130
golevel: 7
name:
  GOBP.STRING_v12.0_1122204_STRINGid_GO:0009130_Pyrimidine_nucleoside_monophosphate_biosynthetic_process


id: GO:0009139
description: Pyrimidine nucleoside diphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009139
golevel: 7
name:
  GOBP.STRING_v12.0_1122204_STRINGid_GO:0009139_Pyrimidine_nucleoside_diphosphate_biosynthetic_process


id: GO:0009148
description: Pyrimidine nucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009148
golevel: 7
name:
  GOBP.STRING_v12.0_1122204_STRINGid_GO:0009148_Pyrimidine_nucleoside_triphosphate_biosynthetic_process


id: GO:0009157
description: Deoxyribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009157
golevel: 7
name:
  GOBP.STRING_v12.0_1122204_STRINGid_GO:0009157_Deoxyribonucleoside_monophosphate_biosynthetic_process


id: GO:0009168
description: Purine ribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009168
golevel: 8
name:
  GOBP.STRING_v12.0_1122204_STRINGid_GO:0009168_Purine_ribonucleoside_monophosphate_biosynthetic_process


id: GO:0009170
description: Purine deoxyribonucleoside monophosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009170
golevel: 8
name:
  GOBP.STRING_v12.0_1122204_STRINGid_GO:0009170_Purine_deoxyribonucleoside_monophosphate_metabolic_process


id: GO:0009171
description: Purine deoxyribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009171
golevel: 8
name:
  GOBP.STRING_v12.0_1122204_STRINGid_GO:0009171_Purine_deoxyribonucleoside_monophosphate_biosynthetic_process


id: GO:0009173
description: Pyrimidine ribonucleoside monophosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009173
golevel: 8
name:
  GOBP.STRING_v12.0_1122204_STRINGid_GO:0009173_Pyrimidine_ribonucleoside_monophosphate_metabolic_process


id: GO:0009174
description: Pyrimidine ribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009174
golevel: 8
name:
  GOBP.STRING_v12.0_1122204_STRINGid_GO:0009174_Pyrimidine_ribonucleoside_monophosphate_biosynthetic_process


id: GO:0009176
description: Pyrimidine deoxyribonucleoside monophosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009176
golevel: 8
name:
  GOBP.STRING_v12.0_1122204_STRINGid_GO:0009176_Pyrimidine_deoxyribonucleoside_monophosphate_metabolic_process


id: GO:0009177
description: Pyrimidine deoxyribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009177
golevel: 8
name:
  GOBP.STRING_v12.0_1122204_STRINGid_GO:0009177_Pyrimidine_deoxyribonucleoside_monophosphate_biosynthetic_process


id: GO:0009196
description: Pyrimidine deoxyribonucleoside diphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009196
golevel: 8
name:
  GOBP.STRING_v12.0_1122204_STRINGid_GO:0009196_Pyrimidine_deoxyribonucleoside_diphosphate_metabolic_process


id: GO:0009197
description: Pyrimidine deoxyribonucleoside diphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009197
golevel: 8
name:
  GOBP.STRING_v12.0_1122204_STRINGid_GO:0009197_Pyrimidine_deoxyribonucleoside_diphosphate_biosynthetic_process


id: GO:0009206
description: Purine ribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009206
golevel: 8
name:
  GOBP.STRING_v12.0_1122204_STRINGid_GO:0009206_Purine_ribonucleoside_triphosphate_biosynthetic_process


id: GO:0009208
description: Pyrimidine ribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009208
golevel: 8
name:
  GOBP.STRING_v12.0_1122204_STRINGid_GO:0009208_Pyrimidine_ribonucleoside_triphosphate_metabolic_process


id: GO:0009209
description: Pyrimidine ribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009209
golevel: 8
name:
  GOBP.STRING_v12.0_1122204_STRINGid_GO:0009209_Pyrimidine_ribonucleoside_triphosphate_biosynthetic_process


id: GO:0009210
description: Pyrimidine ribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009210
golevel: 8
name:
  GOBP.STRING_v12.0_1122204_STRINGid_GO:0009210_Pyrimidine_ribonucleoside_triphosphate_catabolic_process


id: GO:0009211
description: Pyrimidine deoxyribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009211
golevel: 8
name:
  GOBP.STRING_v12.0_1122204_STRINGid_GO:0009211_Pyrimidine_deoxyribonucleoside_triphosphate_metabolic_process


id: GO:0009212
description: Pyrimidine deoxyribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009212
golevel: 8
name:
  GOBP.STRING_v12.0_1122204_STRINGid_GO:0009212_Pyrimidine_deoxyribonucleoside_triphosphate_biosynthetic_process


id: GO:0009213
description: Pyrimidine deoxyribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009213
golevel: 8
name:
  GOBP.STRING_v12.0_1122204_STRINGid_GO:0009213_Pyrimidine_deoxyribonucleoside_triphosphate_catabolic_process


id: GO:0009215
description: Purine deoxyribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009215
golevel: 8
name:
  GOBP.STRING_v12.0_1122204_STRINGid_GO:0009215_Purine_deoxyribonucleoside_triphosphate_metabolic_process


id: GO:0009217
description: Purine deoxyribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009217
golevel: 8
name:
  GOBP.STRING_v12.0_1122204_STRINGid_GO:0009217_Purine_deoxyribonucleoside_triphosphate_catabolic_process


id: GO:0009330
description: DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009330
golevel: 3
name:
  GOCC.STRING_v12.0_1122204_STRINGid_GO:0009330_DNA_topoisomerase_type_II_(double_strand_cut,_ATP-hydrolyzing)_complex


id: GO:0009401
description: Phosphoenolpyruvate-dependent sugar phosphotransferase system
memo: https://amigo.geneontology.org/amigo/term/GO:0009401
golevel: 5
name:
  GOBP.STRING_v12.0_1122204_STRINGid_GO:0009401_Phosphoenolpyruvate-dependent_sugar_phosphotransferase_system


id: GO:0009678
description: Pyrophosphate hydrolysis-driven proton transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0009678
golevel: 5
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0009678_Pyrophosphate_hydrolysis-driven_proton_transmembrane_transporter_activity


id: GO:0010557
description: Positive regulation of macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010557
golevel: 7
name:
  GOBP.STRING_v12.0_1122204_STRINGid_GO:0010557_Positive_regulation_of_macromolecule_biosynthetic_process


id: GO:0010558
description: Negative regulation of macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010558
golevel: 7
name:
  GOBP.STRING_v12.0_1122204_STRINGid_GO:0010558_Negative_regulation_of_macromolecule_biosynthetic_process


id: GO:0010604
description: Positive regulation of macromolecule metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010604
golevel: 6
name:
  GOBP.STRING_v12.0_1122204_STRINGid_GO:0010604_Positive_regulation_of_macromolecule_metabolic_process


id: GO:0010605
description: Negative regulation of macromolecule metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010605
golevel: 6
name:
  GOBP.STRING_v12.0_1122204_STRINGid_GO:0010605_Negative_regulation_of_macromolecule_metabolic_process


id: GO:0015318
description: Inorganic molecular entity transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015318
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0015318_Inorganic_molecular_entity_transmembrane_transporter_activity


id: GO:0015355
description: Secondary active monocarboxylate transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015355
golevel: 5
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0015355_Secondary_active_monocarboxylate_transmembrane_transporter_activity


id: GO:0015415
description: ATPase-coupled phosphate ion transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015415
golevel: 3
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0015415_ATPase-coupled_phosphate_ion_transmembrane_transporter_activity


id: GO:0015453
description: Oxidoreduction-driven active transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015453
golevel: 5
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0015453_Oxidoreduction-driven_active_transmembrane_transporter_activity


id: GO:0015651
description: Quaternary ammonium group transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015651
golevel: 3
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0015651_Quaternary_ammonium_group_transmembrane_transporter_activity


id: GO:0015658
description: Branched-chain amino acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015658
golevel: 4
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0015658_Branched-chain_amino_acid_transmembrane_transporter_activity


id: GO:0015932
description: Nucleobase-containing compound transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015932
golevel: 3
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0015932_Nucleobase-containing_compound_transmembrane_transporter_activity


id: GO:0015988
description: Energy coupled proton transmembrane transport, against electrochemical gradient
memo: https://amigo.geneontology.org/amigo/term/GO:0015988
golevel: 6
name:
  GOBP.STRING_v12.0_1122204_STRINGid_GO:0015988_Energy_coupled_proton_transmembrane_transport,_against_electrochemical_gradient


id: GO:0016614
description: Oxidoreductase activity, acting on CH-OH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016614
golevel: 3
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0016614_Oxidoreductase_activity,_acting_on_CH-OH_group_of_donors


id: GO:0016616
description: Oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016616
golevel: 4
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0016616_Oxidoreductase_activity,_acting_on_the_CH-OH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016620
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016620
golevel: 4
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0016620_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016624
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016624
golevel: 4
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0016624_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_disulfide_as_acceptor


id: GO:0016627
description: Oxidoreductase activity, acting on the CH-CH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016627
golevel: 3
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0016627_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors


id: GO:0016628
description: Oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016628
golevel: 4
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0016628_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016634
description: Oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016634
golevel: 4
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0016634_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_oxygen_as_acceptor


id: GO:0016635
memo: https://amigo.geneontology.org/amigo/term/GO:0016635
golevel: 4
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0016635_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_quinone_or_related_compound_as_acceptor

description:
  Oxidoreductase activity, acting on the CH-CH group of donors, quinone or related compound as acceptor


id: GO:0016638
description: Oxidoreductase activity, acting on the CH-NH2 group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016638
golevel: 3
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0016638_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors


id: GO:0016639
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016639
golevel: 4
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0016639_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016642
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016642
golevel: 4
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0016642_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_disulfide_as_acceptor


id: GO:0016645
description: Oxidoreductase activity, acting on the CH-NH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016645
golevel: 3
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0016645_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors


id: GO:0016646
description: Oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016646
golevel: 4
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0016646_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016652
description: Oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016652
golevel: 4
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0016652_Oxidoreductase_activity,_acting_on_NAD(P)H,_NAD(P)_as_acceptor


id: GO:0016653
description: Oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016653
golevel: 4
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0016653_Oxidoreductase_activity,_acting_on_NAD(P)H,_heme_protein_as_acceptor


id: GO:0016655
description: Oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016655
golevel: 4
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0016655_Oxidoreductase_activity,_acting_on_NAD(P)H,_quinone_or_similar_compound_as_acceptor


id: GO:0016657
description: Oxidoreductase activity, acting on NAD(P)H, nitrogenous group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016657
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0016657_Oxidoreductase_activity,_acting_on_NAD(P)H,_nitrogenous_group_as_acceptor


id: GO:0016661
description: Oxidoreductase activity, acting on other nitrogenous compounds as donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016661
golevel: 3
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0016661_Oxidoreductase_activity,_acting_on_other_nitrogenous_compounds_as_donors


id: GO:0016663
description: Oxidoreductase activity, acting on other nitrogenous compounds as donors, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016663
golevel: 4
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0016663_Oxidoreductase_activity,_acting_on_other_nitrogenous_compounds_as_donors,_oxygen_as_acceptor


id: GO:0016667
description: Oxidoreductase activity, acting on a sulfur group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016667
golevel: 3
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0016667_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors


id: GO:0016668
description: Oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016668
golevel: 4
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0016668_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_NAD(P)_as_acceptor


id: GO:0016671
description: Oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016671
golevel: 4
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0016671_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_disulfide_as_acceptor


id: GO:0016672
memo: https://amigo.geneontology.org/amigo/term/GO:0016672
golevel: 4
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0016672_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_quinone_or_similar_compound_as_acceptor

description:
  Oxidoreductase activity, acting on a sulfur group of donors, quinone or similar compound as acceptor


id: GO:0016675
description: Oxidoreductase activity, acting on a heme group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016675
golevel: 3
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0016675_Oxidoreductase_activity,_acting_on_a_heme_group_of_donors


id: GO:0016677
description: Oxidoreductase activity, acting on a heme group of donors, nitrogenous group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016677
golevel: 4
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0016677_Oxidoreductase_activity,_acting_on_a_heme_group_of_donors,_nitrogenous_group_as_acceptor


id: GO:0016679
description: Oxidoreductase activity, acting on diphenols and related substances as donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016679
golevel: 3
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0016679_Oxidoreductase_activity,_acting_on_diphenols_and_related_substances_as_donors


id: GO:0016682
description: Oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016682
golevel: 4
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0016682_Oxidoreductase_activity,_acting_on_diphenols_and_related_substances_as_donors,_oxygen_as_acceptor


id: GO:0016684
description: Oxidoreductase activity, acting on peroxide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016684
golevel: 3
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0016684_Oxidoreductase_activity,_acting_on_peroxide_as_acceptor


id: GO:0016701
description: Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen
memo: https://amigo.geneontology.org/amigo/term/GO:0016701
golevel: 3
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0016701_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen


id: GO:0016702
memo: https://amigo.geneontology.org/amigo/term/GO:0016702
golevel: 4
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0016702_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen,_incorporation_of_two_atoms_of_oxygen

description:
  Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen


id: GO:0016703
memo: https://amigo.geneontology.org/amigo/term/GO:0016703
golevel: 4
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0016703_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen,_incorporation_of_one_atom_of_oxygen_(internal_monooxygenases_or_internal_mixed_function_oxidases)

description:
  Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)


id: GO:0016705
memo: https://amigo.geneontology.org/amigo/term/GO:0016705
golevel: 3
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0016705_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen


id: GO:0016708
memo: https://amigo.geneontology.org/amigo/term/GO:0016708
golevel: 4
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0016708_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen,_NAD(P)H_as_one_donor,_and_incorporation_of_two_atoms_of_oxygen_into_one_donor

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor


id: GO:0016709
memo: https://amigo.geneontology.org/amigo/term/GO:0016709
golevel: 4
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0016709_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen,_NAD(P)H_as_one_donor,_and_incorporation_of_one_atom_of_oxygen

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen


id: GO:0016717
memo: https://amigo.geneontology.org/amigo/term/GO:0016717
golevel: 4
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0016717_Oxidoreductase_activity,_acting_on_paired_donors,_with_oxidation_of_a_pair_of_donors_resulting_in_the_reduction_of_molecular_oxygen_to_two_molecules_of_water

description:
  Oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water


id: GO:0016721
description: Oxidoreductase activity, acting on superoxide radicals as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016721
golevel: 3
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0016721_Oxidoreductase_activity,_acting_on_superoxide_radicals_as_acceptor


id: GO:0016724
description: Oxidoreductase activity, acting on metal ions, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016724
golevel: 4
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0016724_Oxidoreductase_activity,_acting_on_metal_ions,_oxygen_as_acceptor


id: GO:0016726
description: Oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016726
golevel: 4
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0016726_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_NAD_or_NADP_as_acceptor


id: GO:0016728
description: Oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016728
golevel: 4
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0016728_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_disulfide_as_acceptor


id: GO:0016730
description: Oxidoreductase activity, acting on iron-sulfur proteins as donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016730
golevel: 3
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0016730_Oxidoreductase_activity,_acting_on_iron-sulfur_proteins_as_donors


id: GO:0016731
description: Oxidoreductase activity, acting on iron-sulfur proteins as donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016731
golevel: 4
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0016731_Oxidoreductase_activity,_acting_on_iron-sulfur_proteins_as_donors,_NAD_or_NADP_as_acceptor


id: GO:0016742
description: Hydroxymethyl-, formyl- and related transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0016742
golevel: 4
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0016742_Hydroxymethyl-,_formyl-_and_related_transferase_activity


id: GO:0016747
description: Acyltransferase activity, transferring groups other than amino-acyl groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016747
golevel: 4
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0016747_Acyltransferase_activity,_transferring_groups_other_than_amino-acyl_groups


id: GO:0016765
description: Transferase activity, transferring alkyl or aryl (other than methyl) groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016765
golevel: 3
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0016765_Transferase_activity,_transferring_alkyl_or_aryl_(other_than_methyl)_groups


id: GO:0016767
description: Geranylgeranyl-diphosphate geranylgeranyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0016767
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0016767_Geranylgeranyl-diphosphate_geranylgeranyltransferase_activity


id: GO:0016772
description: Transferase activity, transferring phosphorus-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016772
golevel: 3
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0016772_Transferase_activity,_transferring_phosphorus-containing_groups


id: GO:0016773
description: Phosphotransferase activity, alcohol group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016773
golevel: 4
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0016773_Phosphotransferase_activity,_alcohol_group_as_acceptor


id: GO:0016774
description: Phosphotransferase activity, carboxyl group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016774
golevel: 4
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0016774_Phosphotransferase_activity,_carboxyl_group_as_acceptor


id: GO:0016775
description: Phosphotransferase activity, nitrogenous group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016775
golevel: 4
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0016775_Phosphotransferase_activity,_nitrogenous_group_as_acceptor


id: GO:0016776
description: Phosphotransferase activity, phosphate group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016776
golevel: 4
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0016776_Phosphotransferase_activity,_phosphate_group_as_acceptor


id: GO:0016780
description: Phosphotransferase activity, for other substituted phosphate groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016780
golevel: 4
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0016780_Phosphotransferase_activity,_for_other_substituted_phosphate_groups


id: GO:0016782
description: Transferase activity, transferring sulphur-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016782
golevel: 3
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0016782_Transferase_activity,_transferring_sulphur-containing_groups


id: GO:0016796
memo: https://amigo.geneontology.org/amigo/term/GO:0016796
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0016796_Exonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_5-phosphomonoesters

description:
  Exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5-phosphomonoesters


id: GO:0016810
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
memo: https://amigo.geneontology.org/amigo/term/GO:0016810
golevel: 3
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0016810_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds


id: GO:0016811
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
memo: https://amigo.geneontology.org/amigo/term/GO:0016811
golevel: 4
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0016811_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_linear_amides


id: GO:0016812
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
memo: https://amigo.geneontology.org/amigo/term/GO:0016812
golevel: 4
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0016812_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_cyclic_amides


id: GO:0016813
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines
memo: https://amigo.geneontology.org/amigo/term/GO:0016813
golevel: 4
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0016813_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_linear_amidines


id: GO:0016814
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines
memo: https://amigo.geneontology.org/amigo/term/GO:0016814
golevel: 4
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0016814_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_cyclic_amidines


id: GO:0016818
description: Hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
memo: https://amigo.geneontology.org/amigo/term/GO:0016818
golevel: 4
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0016818_Hydrolase_activity,_acting_on_acid_anhydrides,_in_phosphorus-containing_anhydrides


id: GO:0016822
description: Hydrolase activity, acting on acid carbon-carbon bonds
memo: https://amigo.geneontology.org/amigo/term/GO:0016822
golevel: 3
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0016822_Hydrolase_activity,_acting_on_acid_carbon-carbon_bonds


id: GO:0016823
description: Hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances
memo: https://amigo.geneontology.org/amigo/term/GO:0016823
golevel: 4
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0016823_Hydrolase_activity,_acting_on_acid_carbon-carbon_bonds,_in_ketonic_substances


id: GO:0016825
description: Hydrolase activity, acting on acid phosphorus-nitrogen bonds
memo: https://amigo.geneontology.org/amigo/term/GO:0016825
golevel: 3
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0016825_Hydrolase_activity,_acting_on_acid_phosphorus-nitrogen_bonds


id: GO:0016837
description: Carbon-oxygen lyase activity, acting on polysaccharides
memo: https://amigo.geneontology.org/amigo/term/GO:0016837
golevel: 4
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0016837_Carbon-oxygen_lyase_activity,_acting_on_polysaccharides


id: GO:0016855
description: Racemase and epimerase activity, acting on amino acids and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0016855
golevel: 4
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0016855_Racemase_and_epimerase_activity,_acting_on_amino_acids_and_derivatives


id: GO:0016857
description: Racemase and epimerase activity, acting on carbohydrates and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0016857
golevel: 4
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0016857_Racemase_and_epimerase_activity,_acting_on_carbohydrates_and_derivatives


id: GO:0016861
description: Intramolecular oxidoreductase activity, interconverting aldoses and ketoses
memo: https://amigo.geneontology.org/amigo/term/GO:0016861
golevel: 4
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0016861_Intramolecular_oxidoreductase_activity,_interconverting_aldoses_and_ketoses


id: GO:0016863
description: Intramolecular oxidoreductase activity, transposing C=C bonds
memo: https://amigo.geneontology.org/amigo/term/GO:0016863
golevel: 4
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0016863_Intramolecular_oxidoreductase_activity,_transposing_C=C_bonds


id: GO:0016868
description: Intramolecular transferase activity, phosphotransferases
memo: https://amigo.geneontology.org/amigo/term/GO:0016868
golevel: 4
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0016868_Intramolecular_transferase_activity,_phosphotransferases


id: GO:0016869
description: Intramolecular transferase activity, transferring amino groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016869
golevel: 4
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0016869_Intramolecular_transferase_activity,_transferring_amino_groups


id: GO:0016884
description: Carbon-nitrogen ligase activity, with glutamine as amido-N-donor
memo: https://amigo.geneontology.org/amigo/term/GO:0016884
golevel: 4
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0016884_Carbon-nitrogen_ligase_activity,_with_glutamine_as_amido-N-donor


id: GO:0016888
description: Endodeoxyribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016888
golevel: 4
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0016888_Endodeoxyribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016889
description: Endodeoxyribonuclease activity, producing 3-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016889
golevel: 4
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0016889_Endodeoxyribonuclease_activity,_producing_3-phosphomonoesters


id: GO:0016891
description: Endoribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016891
golevel: 4
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0016891_Endoribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016892
description: Endoribonuclease activity, producing 3-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016892
golevel: 4
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0016892_Endoribonuclease_activity,_producing_3-phosphomonoesters


id: GO:0016893
memo: https://amigo.geneontology.org/amigo/term/GO:0016893
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0016893_Endonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_5-phosphomonoesters

description:
  Endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5-phosphomonoesters


id: GO:0016894
memo: https://amigo.geneontology.org/amigo/term/GO:0016894
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0016894_Endonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_3-phosphomonoesters

description:
  Endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3-phosphomonoesters


id: GO:0016895
description: Exodeoxyribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016895
golevel: 6
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0016895_Exodeoxyribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016896
description: Exoribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016896
golevel: 6
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0016896_Exoribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016899
description: Oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016899
golevel: 4
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0016899_Oxidoreductase_activity,_acting_on_the_CH-OH_group_of_donors,_oxygen_as_acceptor


id: GO:0016901
memo: https://amigo.geneontology.org/amigo/term/GO:0016901
golevel: 4
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0016901_Oxidoreductase_activity,_acting_on_the_CH-OH_group_of_donors,_quinone_or_similar_compound_as_acceptor

description:
  Oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor


id: GO:0016903
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016903
golevel: 3
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0016903_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors


id: GO:0019171
description: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0019171
golevel: 5
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0019171_3-hydroxyacyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0019219
description: Regulation of nucleobase-containing compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0019219
golevel: 6
name:
  GOBP.STRING_v12.0_1122204_STRINGid_GO:0019219_Regulation_of_nucleobase-containing_compound_metabolic_process


id: GO:0019243
description: Methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione
memo: https://amigo.geneontology.org/amigo/term/GO:0019243
golevel: 7
name:
  GOBP.STRING_v12.0_1122204_STRINGid_GO:0019243_Methylglyoxal_catabolic_process_to_D-lactate_via_S-lactoyl-glutathione


id: GO:0019279
description: L-methionine biosynthetic process from L-homoserine via cystathionine
memo: https://amigo.geneontology.org/amigo/term/GO:0019279
golevel: 6
name:
  GOBP.STRING_v12.0_1122204_STRINGid_GO:0019279_L-methionine_biosynthetic_process_from_L-homoserine_via_cystathionine


id: GO:0019281
description: L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
memo: https://amigo.geneontology.org/amigo/term/GO:0019281
golevel: 7
name:
  GOBP.STRING_v12.0_1122204_STRINGid_GO:0019281_L-methionine_biosynthetic_process_from_homoserine_via_O-succinyl-L-homoserine_and_cystathionine


id: GO:0019288
description: Isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
memo: https://amigo.geneontology.org/amigo/term/GO:0019288
golevel: 5
name:
  GOBP.STRING_v12.0_1122204_STRINGid_GO:0019288_Isopentenyl_diphosphate_biosynthetic_process,_methylerythritol_4-phosphate_pathway


id: GO:0019379
memo: https://amigo.geneontology.org/amigo/term/GO:0019379
golevel: 5
name:
  GOBP.STRING_v12.0_1122204_STRINGid_GO:0019379_Sulfate_assimilation,_phosphoadenylyl_sulfate_reduction_by_phosphoadenylyl-sulfate_reductase_(thioredoxin)

description:
  Sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)


id: GO:0019647
description: Formaldehyde assimilation via ribulose monophosphate cycle
memo: https://amigo.geneontology.org/amigo/term/GO:0019647
golevel: 6
name:
  GOBP.STRING_v12.0_1122204_STRINGid_GO:0019647_Formaldehyde_assimilation_via_ribulose_monophosphate_cycle


id: GO:0019829
description: ATPase-coupled cation transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0019829
golevel: 3
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0019829_ATPase-coupled_cation_transmembrane_transporter_activity


id: GO:0022872
memo: https://amigo.geneontology.org/amigo/term/GO:0022872
golevel: 5
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0022872_protein-N(PI)-phosphohistidine-mannitol_phosphotransferase_system_transmembrane_transporter_activity

description:
  protein-N(PI)-phosphohistidine-mannitol phosphotransferase system transmembrane transporter activity


id: GO:0022877
description: protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0022877
golevel: 5
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0022877_protein-N(PI)-phosphohistidine-fructose_phosphotransferase_system_transporter_activity


id: GO:0030174
description: Regulation of DNA-templated DNA replication initiation
memo: https://amigo.geneontology.org/amigo/term/GO:0030174
golevel: 9
name:
  GOBP.STRING_v12.0_1122204_STRINGid_GO:0030174_Regulation_of_DNA-templated_DNA_replication_initiation


id: GO:0030435
description: Sporulation resulting in formation of a cellular spore
memo: https://amigo.geneontology.org/amigo/term/GO:0030435
golevel: 3
name:
  GOBP.STRING_v12.0_1122204_STRINGid_GO:0030435_Sporulation_resulting_in_formation_of_a_cellular_spore


id: GO:0030604
description: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0030604
golevel: 5
name:
  GOMF.STRING_v12.0_1122204_STRINGid_GO:0030604_1-deoxy-D-xylulose-5-phosphate_reductoisomerase_activity


