# geneInfo

ensembl_gene_id: RUTHE_00003
symbol: EPX87799.1
gene_biotype: protein_coding
description:
  Uncharacterized protein SCO1/SenC/PrrC; Involved in biogenesis of respiratory and photosynthetic system.


ensembl_gene_id: RUTHE_00006
symbol: mntH
gene_biotype: protein_coding
description:
  NRAMP (natural resistance-associated macrophage protein) metal ion transporter; H(+)-stimulated, divalent metal cation uptake system. Belongs to the NRAMP family.


ensembl_gene_id: RUTHE_00010
symbol: EPX87806.1
gene_biotype: protein_coding
description:
  Lipoprotein signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins.


ensembl_gene_id: RUTHE_00016
symbol: EPX87812.1
gene_biotype: protein_coding
description:
  ABC-type enterochelin transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: RUTHE_00020
symbol: EPX87816.1
gene_biotype: protein_coding
description:
  Monosaccharide ABC transporter membrane protein; TC 3.A.1.2.-; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: RUTHE_00026
symbol: EPX87822.1
gene_biotype: protein_coding
description:
  Distinct helicase family; With a unique C-terminal domain including a metal-binding cysteine cluster.


ensembl_gene_id: RUTHE_00041
symbol: metZ
gene_biotype: protein_coding
description:
  O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide.


ensembl_gene_id: RUTHE_00043
symbol: speE
gene_biotype: protein_coding
description:
  Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.


ensembl_gene_id: RUTHE_00044
symbol: EPX87839.1
gene_biotype: protein_coding
description:
  S-adenosylmethionine decarboxylase proenzyme; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine.


ensembl_gene_id: RUTHE_00066
symbol: pcm
gene_biotype: protein_coding
description:
  protein-L-isoaspartate(D-aspartate) O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins.


ensembl_gene_id: RUTHE_00067
symbol: surE
gene_biotype: protein_coding
description:
  5'-nucleotidase/3'- nucleotidase/exopolyphosphatase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.


ensembl_gene_id: RUTHE_00069
symbol: EPX87864.1
gene_biotype: protein_coding
description:
  Glutamine phosphoribosylpyrophosphate amidotransferase; Overlaps another CDS with the same product name.


ensembl_gene_id: RUTHE_00072
symbol: radA
gene_biotype: protein_coding
description:
  DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.


ensembl_gene_id: RUTHE_00076
symbol: EPX87871.1
gene_biotype: protein_coding
description:
  Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.


ensembl_gene_id: RUTHE_00078
symbol: EPX87873.1
gene_biotype: protein_coding
description:
  Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily.


ensembl_gene_id: RUTHE_00080
symbol: panB
gene_biotype: protein_coding
description:
  Ketopantoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family.


ensembl_gene_id: RUTHE_00081
symbol: panC
gene_biotype: protein_coding
description:
  Pantothenate synthetase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.


ensembl_gene_id: RUTHE_00082
symbol: EPX87877.1
gene_biotype: protein_coding
description:
  Carbohydrate ABC transporter ATP-binding protein, CUT1 family; TC 3.A.1.1.-; Belongs to the ABC transporter superfamily.


ensembl_gene_id: RUTHE_00093
symbol: EPX87888.1
gene_biotype: protein_coding
description:
  Uncharacterized protein putative in bacteria; (DUF2063; overlaps another CDS with the same product name.


ensembl_gene_id: RUTHE_00094
symbol: EPX87889.1
gene_biotype: protein_coding
description:
  Uncharacterized protein putative in bacteria; Overlaps another CDS with the same product name; Belongs to the UPF0276 family.


ensembl_gene_id: RUTHE_00107
symbol: cobQ
gene_biotype: protein_coding
description:
  Adenosylcobyric acid synthase (glutamine-hydrolysing); Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.


ensembl_gene_id: RUTHE_00131
symbol: EPX87731.1
gene_biotype: protein_coding
description:
  Putative anaerobic dehydrogenase; Overlaps another CDS with the same product name; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.


ensembl_gene_id: RUTHE_00144
symbol: EPX87742.1
gene_biotype: protein_coding
description:
  Putative oxidoreductase; Related to aryl-alcohol dehydrogenase; overlaps another CDS with the same product name.


ensembl_gene_id: RUTHE_00148
symbol: hmuV
gene_biotype: protein_coding
description:
  ABC-type hemin transport system, ATPase component; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.


ensembl_gene_id: RUTHE_00149
symbol: EPX87747.1
gene_biotype: protein_coding
description:
  ABC-type cobalamin transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: RUTHE_00150
symbol: EPX87748.1
gene_biotype: protein_coding
description:
  ABC-type Fe3+-siderophore transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: RUTHE_00175
symbol: EPX87772.1
gene_biotype: protein_coding
description:
  Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis.


ensembl_gene_id: RUTHE_00183
symbol: EPX87780.1
gene_biotype: protein_coding
description:
  L-erythritol 4-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: RUTHE_00187
symbol: EPX87784.1
gene_biotype: protein_coding
description:
  Monosaccharide ABC transporter membrane protein, CUT2 family; TC 3.A.1.2.-; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: RUTHE_00268
symbol: EPX87695.1
gene_biotype: protein_coding
description:
  Bacterioferritin (cytochrome b1); Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.


ensembl_gene_id: RUTHE_00274
symbol: ftsH
gene_biotype: protein_coding
description:
  ATP-dependent metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family.  In the central section; belongs to the AAA ATPase family.


ensembl_gene_id: RUTHE_00276
symbol: EPX87703.1
gene_biotype: protein_coding
description:
  Molecular chaperone (small heat shock protein); Belongs to the small heat shock protein (HSP20) family.


ensembl_gene_id: RUTHE_00309
symbol: glmM
gene_biotype: protein_coding
description:
  Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.


ensembl_gene_id: RUTHE_00310
symbol: ilvC
gene_biotype: protein_coding
description:
  Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate.


ensembl_gene_id: RUTHE_00318
symbol: EPX87613.1
gene_biotype: protein_coding
description:
  Heme/copper-type cytochrome/quinol oxidase, subunit 1; Belongs to the heme-copper respiratory oxidase family.


ensembl_gene_id: RUTHE_00321
symbol: lipB
gene_biotype: protein_coding
description:
  Lipoate-protein ligase B; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate.


ensembl_gene_id: RUTHE_00335
symbol: prfC
gene_biotype: protein_coding
description:
  Bacterial peptide chain release factor 3 (bRF-3); Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.


ensembl_gene_id: RUTHE_00338
symbol: EPX87632.1
gene_biotype: protein_coding
description:
  ABC-type spermidine/putrescine transport system, ATPase component; Belongs to the ABC transporter superfamily.


ensembl_gene_id: RUTHE_00340
symbol: tatA
gene_biotype: protein_coding
description:
  Sec-independent protein secretion pathway component; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.


ensembl_gene_id: RUTHE_00341
symbol: tatB
gene_biotype: protein_coding
description:
  Twin arginine-targeting protein translocase TatB; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation.


ensembl_gene_id: RUTHE_00342
symbol: tatC
gene_biotype: protein_coding
description:
  Twin arginine targeting (Tat) protein translocase TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides.


ensembl_gene_id: RUTHE_00353
symbol: EPX87647.1
gene_biotype: protein_coding
description:
  L-alanine-DL-glutamate epimerase and related enzyme of enolase superfamily; overlaps another CDS with the same product name; Belongs to the mandelate racemase/muconate lactonizing enzyme family.


ensembl_gene_id: RUTHE_00361
symbol: rlpA
gene_biotype: protein_coding
description:
  Rare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.


ensembl_gene_id: RUTHE_00369
symbol: hpf
gene_biotype: protein_coding
description:
  SSU ribosomal protein S30P/sigma 54 modulation protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.


ensembl_gene_id: RUTHE_00379
symbol: cysQ
gene_biotype: protein_coding
description:
  3'(2'),5'-bisphosphate nucleotidase; Converts adenosine-3',5'-bisphosphate (PAP) to AMP. Belongs to the inositol monophosphatase superfamily. CysQ family.


ensembl_gene_id: RUTHE_00388
symbol: ribA
gene_biotype: protein_coding
description:
  GTP cyclohydrolase II; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family.


ensembl_gene_id: RUTHE_00394
symbol: map
gene_biotype: protein_coding
description:
  Methionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.


ensembl_gene_id: RUTHE_00395
symbol: EPX87532.1
gene_biotype: protein_coding
description:
  Response regulator; Consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain protein.


ensembl_gene_id: RUTHE_00396
symbol: EPX87533.1
gene_biotype: protein_coding
description:
  His Kinase A (phospho-acceptor) domain/HAMP domain/Histidine kinase-, DNA gyrase B; And HSP90-like ATPase.


ensembl_gene_id: RUTHE_00397
symbol: EPX87534.1
gene_biotype: protein_coding
description:
  Hydrophobe/Amphiphile Efflux-1 (HAE1) family; MFP subunit; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: RUTHE_00405
symbol: EPX87542.1
gene_biotype: protein_coding
description:
  Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the BPG-independent phosphoglycerate mutase family.


ensembl_gene_id: RUTHE_00407
symbol: rlmH
gene_biotype: protein_coding
description:
  Hypothetical protein; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.


ensembl_gene_id: RUTHE_00408
symbol: rsfS
gene_biotype: protein_coding
description:
  Iojap-like ribosome-associated protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.


ensembl_gene_id: RUTHE_00412
symbol: leuD
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydratase, small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily.


ensembl_gene_id: RUTHE_00443
symbol: EPX87373.1
gene_biotype: protein_coding
description:
  Soluble lytic murein transglycosylase and related regulatory protein; some contain LysM/invasin domain protein.


ensembl_gene_id: RUTHE_00452
symbol: EPX87382.1
gene_biotype: protein_coding
description:
  Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).


ensembl_gene_id: RUTHE_00453
symbol: ctaB
gene_biotype: protein_coding
description:
  Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group; Belongs to the UbiA prenyltransferase family. Protoheme IX farnesyltransferase subfamily.


ensembl_gene_id: RUTHE_00455
symbol: ctaG
gene_biotype: protein_coding
description:
  Cytochrome oxidase assembly factor; Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I; Belongs to the COX11/CtaG family.


ensembl_gene_id: RUTHE_00466
symbol: apt
gene_biotype: protein_coding
description:
  Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.


ensembl_gene_id: RUTHE_00472
symbol: EPX87402.1
gene_biotype: protein_coding
description:
  Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: RUTHE_00473
symbol: deoA
gene_biotype: protein_coding
description:
  Thymidine phosphorylase; The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family.


ensembl_gene_id: RUTHE_00474
symbol: deoB
gene_biotype: protein_coding
description:
  Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family.


ensembl_gene_id: RUTHE_00476
symbol: upp
gene_biotype: protein_coding
description:
  Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.


ensembl_gene_id: RUTHE_00498
symbol: xseA
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.


ensembl_gene_id: RUTHE_00501
symbol: ftsY
gene_biotype: protein_coding
description:
  Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components.


ensembl_gene_id: RUTHE_00503
symbol: EPX87433.1
gene_biotype: protein_coding
description:
  Intracellular septation protein A; Involved in cell division; probably involved in intracellular septation; Belongs to the YciB family.


ensembl_gene_id: RUTHE_00528
symbol: EPX87458.1
gene_biotype: protein_coding
description:
  Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.


ensembl_gene_id: RUTHE_00535
symbol: EPX87465.1
gene_biotype: protein_coding
description:
  L-alanine-DL-glutamate epimerase and related enzyme of enolase superfamily; Belongs to the mandelate racemase/muconate lactonizing enzyme family.


ensembl_gene_id: RUTHE_00542
symbol: EPX87472.1
gene_biotype: protein_coding
description:
  3-oxoacyl-(acyl-carrier-protein) synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.


ensembl_gene_id: RUTHE_00543
symbol: EPX87473.1
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] synthase I; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.


ensembl_gene_id: RUTHE_00544
symbol: EPX87474.1
gene_biotype: protein_coding
description:
  3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase; Necessary for the introduction of cis unsaturation into fatty acids. Catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to E- (2)-decenoyl-ACP and then its isomerization to Z-(3)-decenoyl-ACP. Can catalyze the dehydratase reaction for beta-hydroxyacyl-ACPs with saturated chain lengths up to 16:0, being most active on intermediate chain length.


ensembl_gene_id: RUTHE_00556
symbol: EPX87486.1
gene_biotype: protein_coding
description:
  Erythritol ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: RUTHE_00565
symbol: EPX87495.1
gene_biotype: protein_coding
description:
  Metalloprotein, YbeY family; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.


ensembl_gene_id: RUTHE_00567
symbol: EPX87497.1
gene_biotype: protein_coding
description:
  Apolipoprotein N-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation.


ensembl_gene_id: RUTHE_00569
symbol: metK
gene_biotype: protein_coding
description:
  Methionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.


ensembl_gene_id: RUTHE_00570
symbol: trmB
gene_biotype: protein_coding
description:
  tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.


ensembl_gene_id: RUTHE_00571
symbol: aroA
gene_biotype: protein_coding
description:
  3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.


ensembl_gene_id: RUTHE_00577
symbol: EPX87506.1
gene_biotype: protein_coding
description:
  SSU ribosomal protein S1P; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence.


ensembl_gene_id: RUTHE_00578
symbol: ihfB
gene_biotype: protein_coding
description:
  Integration host factor, beta subunit; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family.


ensembl_gene_id: RUTHE_00582
symbol: trpB
gene_biotype: protein_coding
description:
  Tryptophan synthase, beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.


ensembl_gene_id: RUTHE_00587
symbol: rplY
gene_biotype: protein_coding
description:
  LSU ribosomal protein L25P; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.


ensembl_gene_id: RUTHE_00589
symbol: uvrB
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate  [...]


ensembl_gene_id: RUTHE_00595
symbol: EPX87198.1
gene_biotype: protein_coding
description:
  Ribosome-associated GTPase EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.


ensembl_gene_id: RUTHE_00598
symbol: serS
gene_biotype: protein_coding
description:
  seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).


ensembl_gene_id: RUTHE_00599
symbol: yajC
gene_biotype: protein_coding
description:
  Protein translocase subunit yajC; The SecYEG-SecDF-YajC-YidC holo-translocon (HTL) protein secretase/insertase is a supercomplex required for protein secretion, insertion of proteins into membranes, and assembly of membrane protein complexes. While the SecYEG complex is essential for assembly of a number of proteins and complexes, the SecDF-YajC-YidC subcomplex facilitates these functions.


ensembl_gene_id: RUTHE_00600
symbol: secD
gene_biotype: protein_coding
description:
  Protein-export membrane protein, SecD/SecF family; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: RUTHE_00601
symbol: secF
gene_biotype: protein_coding
description:
  Protein translocase subunit secF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: RUTHE_00603
symbol: ccmA
gene_biotype: protein_coding
description:
  Heme ABC exporter, ATP-binding protein CcmA; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family.


ensembl_gene_id: RUTHE_00606
symbol: ccmC
gene_biotype: protein_coding
description:
  Heme exporter protein CcmC; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmC/CycZ/HelC family.


ensembl_gene_id: RUTHE_00627
symbol: nnrD
gene_biotype: protein_coding
description:
  yjeF related protein; Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S-and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration.


ensembl_gene_id: RUTHE_00630
symbol: tig
gene_biotype: protein_coding
description:
  Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.


ensembl_gene_id: RUTHE_00632
symbol: rpsR
gene_biotype: protein_coding
description:
  SSU ribosomal protein S18P; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.


ensembl_gene_id: RUTHE_00636
symbol: EPX87238.1
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: RUTHE_00641
symbol: EPX87243.1
gene_biotype: protein_coding
description:
  Beta-ketoacyl-acyl-carrier-protein synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.


ensembl_gene_id: RUTHE_00642
symbol: mltG
gene_biotype: protein_coding
description:
  Hypothetical protein, YceG family; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation.


ensembl_gene_id: RUTHE_00662
symbol: EPX87264.1
gene_biotype: protein_coding
description:
  Pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).


ensembl_gene_id: RUTHE_00663
symbol: EPX87265.1
gene_biotype: protein_coding
description:
  Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.


ensembl_gene_id: RUTHE_00664
symbol: pdhA
gene_biotype: protein_coding
description:
  Pyruvate dehydrogenase E1 component, alpha subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).


ensembl_gene_id: RUTHE_00669
symbol: EPX87271.1
gene_biotype: protein_coding
description:
  Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.


ensembl_gene_id: RUTHE_00671
symbol: selO
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the transfer of adenosine 5'-monophosphate (AMP) to Ser, Thr or Tyr residues of target proteins (AMPylation). Belongs to the SELO family.


ensembl_gene_id: RUTHE_00678
symbol: EPX87280.1
gene_biotype: protein_coding
description:
  6-phosphogluconate dehydrogenase; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.


ensembl_gene_id: RUTHE_00681
symbol: EPX87283.1
gene_biotype: protein_coding
description:
  Dihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.


ensembl_gene_id: RUTHE_00683
symbol: EPX87285.1
gene_biotype: protein_coding
description:
  5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterase; Belongs to the 5'-nucleotidase family.


ensembl_gene_id: RUTHE_00696
symbol: EPX87297.1
gene_biotype: protein_coding
description:
  Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.


ensembl_gene_id: RUTHE_00697
symbol: EPX87298.1
gene_biotype: protein_coding
description:
  Ornithine/acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: RUTHE_00699
symbol: dtd
gene_biotype: protein_coding
description:
  D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family.


ensembl_gene_id: RUTHE_00708
symbol: tadA
gene_biotype: protein_coding
description:
  Cytosine/adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: RUTHE_00709
symbol: dnaG
gene_biotype: protein_coding
description:
  DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.


ensembl_gene_id: RUTHE_00710
symbol: rpoD
gene_biotype: protein_coding
description:
  RNA polymerase, sigma 70 subunit, RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.


ensembl_gene_id: RUTHE_00714
symbol: nrdR
gene_biotype: protein_coding
description:
  Transcriptional regulator NrdR; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family.


ensembl_gene_id: RUTHE_00715
symbol: EPX87316.1
gene_biotype: protein_coding
description:
  Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.


ensembl_gene_id: RUTHE_00718
symbol: atpH
gene_biotype: protein_coding
description:
  ATP synthase F1 subcomplex delta subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: RUTHE_00719
symbol: atpA
gene_biotype: protein_coding
description:
  ATP synthase F1 subcomplex alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.


ensembl_gene_id: RUTHE_00720
symbol: atpG
gene_biotype: protein_coding
description:
  ATP synthase, F1 gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.


ensembl_gene_id: RUTHE_00721
symbol: atpD
gene_biotype: protein_coding
description:
  ATP synthase F1 subcomplex beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.


ensembl_gene_id: RUTHE_00722
symbol: atpC
gene_biotype: protein_coding
description:
  ATP synthase F1 subcomplex epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.


ensembl_gene_id: RUTHE_00723
symbol: prs
gene_biotype: protein_coding
description:
  Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.


ensembl_gene_id: RUTHE_00729
symbol: groS
gene_biotype: protein_coding
description:
  Co-chaperonin GroES (HSP10); Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.


ensembl_gene_id: RUTHE_00730
symbol: groL
gene_biotype: protein_coding
description:
  Chaperonin GroL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.


ensembl_gene_id: RUTHE_00733
symbol: purK
gene_biotype: protein_coding
description:
  5-(carboxyamino)imidazole ribonucleotide synthase; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR); Belongs to the PurK/PurT family.


ensembl_gene_id: RUTHE_00734
symbol: purE
gene_biotype: protein_coding
description:
  5-(carboxyamino)imidazole ribonucleotide mutase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).


ensembl_gene_id: RUTHE_00761
symbol: glgC
gene_biotype: protein_coding
description:
  Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.


ensembl_gene_id: RUTHE_00762
symbol: glgB
gene_biotype: protein_coding
description:
  Alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.


ensembl_gene_id: RUTHE_00764
symbol: EPX87365.1
gene_biotype: protein_coding
description:
  Sugar ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: RUTHE_00769
symbol: glmU
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain.


ensembl_gene_id: RUTHE_00776
symbol: lepA
gene_biotype: protein_coding
description:
  GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.


ensembl_gene_id: RUTHE_00778
symbol: EPX87109.1
gene_biotype: protein_coding
description:
  Cation/multidrug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: RUTHE_00779
symbol: EPX87110.1
gene_biotype: protein_coding
description:
  RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: RUTHE_00781
symbol: EPX87112.1
gene_biotype: protein_coding
description:
  Sulfate ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily. Sulfate/tungstate importer (TC 3.A.1.6) family.


ensembl_gene_id: RUTHE_00783
symbol: EPX87114.1
gene_biotype: protein_coding
description:
  Sulfate ABC transporter, permease protein CysT; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: RUTHE_00793
symbol: gcvP
gene_biotype: protein_coding
description:
  Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.


ensembl_gene_id: RUTHE_00794
symbol: gcvH
gene_biotype: protein_coding
description:
  Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.


ensembl_gene_id: RUTHE_00803
symbol: fumC
gene_biotype: protein_coding
description:
  Fumarase, class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.


ensembl_gene_id: RUTHE_00808
symbol: edd
gene_biotype: protein_coding
description:
  6-phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family.


ensembl_gene_id: RUTHE_00813
symbol: murG
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.


ensembl_gene_id: RUTHE_00818
symbol: ddl
gene_biotype: protein_coding
description:
  D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.


ensembl_gene_id: RUTHE_00819
symbol: ftsQ
gene_biotype: protein_coding
description:
  Cell division septal protein; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily.


ensembl_gene_id: RUTHE_00820
symbol: ftsA
gene_biotype: protein_coding
description:
  Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.


ensembl_gene_id: RUTHE_00821
symbol: ftsZ
gene_biotype: protein_coding
description:
  Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.


ensembl_gene_id: RUTHE_00823
symbol: lpxC
gene_biotype: protein_coding
description:
  UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the LpxC family.


ensembl_gene_id: RUTHE_00824
symbol: bamD
gene_biotype: protein_coding
description:
  Beta-barrel assembly machine subunit BamD; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.


ensembl_gene_id: RUTHE_00837
symbol: EPX87166.1
gene_biotype: protein_coding
description:
  Cobalamin biosynthesis protein CobT; Nicotinate-mononucleotide 5,6-dimethylbenzimidazole phosphoribosyltransferase.


ensembl_gene_id: RUTHE_00845
symbol: gatB
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily.


ensembl_gene_id: RUTHE_00854
symbol: glcB
gene_biotype: protein_coding
description:
  Malate synthase; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.


ensembl_gene_id: RUTHE_00859
symbol: EPX87188.1
gene_biotype: protein_coding
description:
  Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.


ensembl_gene_id: RUTHE_00876
symbol: recA
gene_biotype: protein_coding
description:
  Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.


ensembl_gene_id: RUTHE_00885
symbol: lipA
gene_biotype: protein_coding
description:
  Lipoate synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.


ensembl_gene_id: RUTHE_00894
symbol: frr
gene_biotype: protein_coding
description:
  Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.


ensembl_gene_id: RUTHE_00895
symbol: EPX86087.1
gene_biotype: protein_coding
description:
  Undecaprenyl pyrophosphate synthetase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.


ensembl_gene_id: RUTHE_00898
symbol: dxr
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family.


ensembl_gene_id: RUTHE_00902
symbol: bamA
gene_biotype: protein_coding
description:
  Beta-barrel assembly machine subunit BamA; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.


ensembl_gene_id: RUTHE_00904
symbol: fabZ
gene_biotype: protein_coding
description:
  3-hydroxyacyl-[acyl-carrier-protein] dehydratase; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.


ensembl_gene_id: RUTHE_00905
symbol: lpxA
gene_biotype: protein_coding
description:
  acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: RUTHE_00908
symbol: mnmA
gene_biotype: protein_coding
description:
  tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.


ensembl_gene_id: RUTHE_00911
symbol: ligA
gene_biotype: protein_coding
description:
  DNA ligase, NAD-dependent; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA.


ensembl_gene_id: RUTHE_00915
symbol: hisI
gene_biotype: protein_coding
description:
  phosphoribosyl-AMP cyclohydrolase; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP.


ensembl_gene_id: RUTHE_00918
symbol: trmFO
gene_biotype: protein_coding
description:
  tRNA:m(5)U-54 methyltransferase; Catalyzes the folate-dependent formation of 5-methyl-uridine at position 54 (M-5-U54) in all tRNAs; Belongs to the MnmG family. TrmFO subfamily.


ensembl_gene_id: RUTHE_00921
symbol: gyrA
gene_biotype: protein_coding
description:
  DNA gyrase, A subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: RUTHE_00941
symbol: mfd
gene_biotype: protein_coding
description:
  Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.


ensembl_gene_id: RUTHE_00950
symbol: psuG
gene_biotype: protein_coding
description:
  Putative enzyme involved in pigment biosynthesis; Catalyzes the reversible cleavage of pseudouridine 5'- phosphate (PsiMP) to ribose 5-phosphate and uracil. Functions biologically in the cleavage direction, as part of a pseudouridine degradation pathway; Belongs to the pseudouridine-5'-phosphate glycosidase family.


ensembl_gene_id: RUTHE_00953
symbol: tsf
gene_biotype: protein_coding
description:
  Translation elongation factor Ts (EF-Ts); Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.


ensembl_gene_id: RUTHE_00965
symbol: EPX86156.1
gene_biotype: protein_coding
description:
  Amino acid/amide ABC transporter membrane protein 1, HAAT family; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: RUTHE_00966
symbol: EPX86157.1
gene_biotype: protein_coding
description:
  Amino acid/amide ABC transporter membrane protein 2, HAAT family; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: RUTHE_00969
symbol: hflX
gene_biotype: protein_coding
description:
  GTP-binding protein HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.


ensembl_gene_id: RUTHE_00970
symbol: hfq
gene_biotype: protein_coding
description:
  RNA chaperone Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family.


ensembl_gene_id: RUTHE_00974
symbol: EPX86165.1
gene_biotype: protein_coding
description:
  tRNA-U20-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.


ensembl_gene_id: RUTHE_00975
symbol: ispDF
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D- erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C- methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF).


ensembl_gene_id: RUTHE_00976
symbol: EPX86167.1
gene_biotype: protein_coding
description:
  Phosphatidylglycerophosphatase; Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG).


ensembl_gene_id: RUTHE_00979
symbol: EPX86170.1
gene_biotype: protein_coding
description:
  Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.


ensembl_gene_id: RUTHE_00985
symbol: EPX86176.1
gene_biotype: protein_coding
description:
  Single-strand binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.


ensembl_gene_id: RUTHE_00986
symbol: aroB
gene_biotype: protein_coding
description:
  3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).


ensembl_gene_id: RUTHE_00987
symbol: aroK
gene_biotype: protein_coding
description:
  Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.


ensembl_gene_id: RUTHE_00994
symbol: lpxD
gene_biotype: protein_coding
description:
  UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily.


ensembl_gene_id: RUTHE_01012
symbol: EPX86202.1
gene_biotype: protein_coding
description:
  Isocitrate dehydrogenase (NADP); Belongs to the isocitrate and isopropylmalate dehydrogenases family.


ensembl_gene_id: RUTHE_01017
symbol: alaS
gene_biotype: protein_coding
description:
  alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.


ensembl_gene_id: RUTHE_01019
symbol: metAA
gene_biotype: protein_coding
description:
  Homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family.


ensembl_gene_id: RUTHE_01027
symbol: rplM
gene_biotype: protein_coding
description:
  LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.


ensembl_gene_id: RUTHE_01028
symbol: EPX86218.1
gene_biotype: protein_coding
description:
  Zn-dependent carboxypeptidase; Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues.


ensembl_gene_id: RUTHE_01029
symbol: ctaA
gene_biotype: protein_coding
description:
  Uncharacterized protein required for cytochrome oxidase assembly; Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group; Belongs to the COX15/CtaA family. Type 2 subfamily.


ensembl_gene_id: RUTHE_01030
symbol: trmJ
gene_biotype: protein_coding
description:
  RNA methyltransferase, TrmH family, group 1; Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA.


ensembl_gene_id: RUTHE_01037
symbol: proA
gene_biotype: protein_coding
description:
  Glutamate-5-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.


ensembl_gene_id: RUTHE_01038
symbol: proB
gene_biotype: protein_coding
description:
  Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.


ensembl_gene_id: RUTHE_01039
symbol: obg
gene_biotype: protein_coding
description:
  Obg family GTPase CgtA; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.


ensembl_gene_id: RUTHE_01044
symbol: EPX86234.1
gene_biotype: protein_coding
description:
  NOL1/NOP2/sun family; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.


ensembl_gene_id: RUTHE_01047
symbol: EPX86237.1
gene_biotype: protein_coding
description:
  2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family.


ensembl_gene_id: RUTHE_01048
symbol: EPX86238.1
gene_biotype: protein_coding
description:
  Cardiolipin synthetase 2; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol; Belongs to the phospholipase D family. Cardiolipin synthase subfamily.


ensembl_gene_id: RUTHE_01065
symbol: ribB
gene_biotype: protein_coding
description:
  GTP cyclohydrolase II/3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.


ensembl_gene_id: RUTHE_01066
symbol: ribH
gene_biotype: protein_coding
description:
  6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.


ensembl_gene_id: RUTHE_01069
symbol: yacG
gene_biotype: protein_coding
description:
  Uncharacterized protein putative in bacteria; Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C- terminal domain of GyrB, which probably disrupts DNA binding by the gyrase.


ensembl_gene_id: RUTHE_01071
symbol: EPX86259.1
gene_biotype: protein_coding
description:
  MAF protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.


ensembl_gene_id: RUTHE_01072
symbol: infA
gene_biotype: protein_coding
description:
  Bacterial translation initiation factor 1 (bIF-1); One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.


ensembl_gene_id: RUTHE_01073
symbol: EPX86261.1
gene_biotype: protein_coding
description:
  Protein-tyrosine-phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.


ensembl_gene_id: RUTHE_01075
symbol: hisD
gene_biotype: protein_coding
description:
  Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.


ensembl_gene_id: RUTHE_01077
symbol: murA
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.


ensembl_gene_id: RUTHE_01085
symbol: EPX86272.1
gene_biotype: protein_coding
description:
  Trypsin-like serine protease, typically periplasmic; Contains C-terminal PDZ domain protein; overlaps another CDS with the same product name.


ensembl_gene_id: RUTHE_01090
symbol: EPX86276.1
gene_biotype: protein_coding
description:
  L-proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: RUTHE_01094
symbol: EPX86280.1
gene_biotype: protein_coding
description:
  ABC-type xylose transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: RUTHE_01108
symbol: gltX
gene_biotype: protein_coding
description:
  glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.


ensembl_gene_id: RUTHE_01110
symbol: EPX86296.1
gene_biotype: protein_coding
description:
  Uncharacterized protein involved in biosynthesis of c-type cytochrome; Possible subunit of a heme lyase.


ensembl_gene_id: RUTHE_01114
symbol: ccmE
gene_biotype: protein_coding
description:
  Cytochrome c-type biogenesis protein CcmE; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. Belongs to the CcmE/CycJ family.


ensembl_gene_id: RUTHE_01120
symbol: purL
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase subunit II; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to [...]


ensembl_gene_id: RUTHE_01129
symbol: EPX86315.1
gene_biotype: protein_coding
description:
  Glyceraldehyde-3-phosphate dehydrogenase (NAD+); Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: RUTHE_01131
symbol: coaD
gene_biotype: protein_coding
description:
  Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.


ensembl_gene_id: RUTHE_01143
symbol: EPX86328.1
gene_biotype: protein_coding
description:
  Alkylhydroperoxidase AhpD family core domain protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.


ensembl_gene_id: RUTHE_01161
symbol: nadD
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).


ensembl_gene_id: RUTHE_01168
symbol: EPX86353.1
gene_biotype: protein_coding
description:
  Putative ABC-type transport system involved in lysophospholipase L1 biosynthesis; Permease component.


ensembl_gene_id: RUTHE_01170
symbol: clpP
gene_biotype: protein_coding
description:
  Protease subunit of ATP-dependent Clp protease; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: RUTHE_01176
symbol: moaA
gene_biotype: protein_coding
description:
  Cyclic pyranopterin monophosphate synthase subunit MoaA; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.


ensembl_gene_id: RUTHE_01177
symbol: EPX86362.1
gene_biotype: protein_coding
description:
  3-deoxy-D-manno-octulosonic-acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family.


ensembl_gene_id: RUTHE_01188
symbol: EPX86373.1
gene_biotype: protein_coding
description:
  16S rRNA uridine-pseudouridylate synthase and related pseudouridylate synthase; Belongs to the pseudouridine synthase RsuA family.


ensembl_gene_id: RUTHE_01191
symbol: EPX86376.1
gene_biotype: protein_coding
description:
  NAD/NADP transhydrogenase beta subunit; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family.


ensembl_gene_id: RUTHE_01193
symbol: kynU
gene_biotype: protein_coding
description:
  Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively.


ensembl_gene_id: RUTHE_01196
symbol: EPX86381.1
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase catalytic subunit; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity.


ensembl_gene_id: RUTHE_01205
symbol: EPX86390.1
gene_biotype: protein_coding
description:
  Nucleoside ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: RUTHE_01224
symbol: EPX86409.1
gene_biotype: protein_coding
description:
  ABC-type metal ion transport system, periplasmic component/surface adhesin; Belongs to the bacterial solute-binding protein 9 family.


ensembl_gene_id: RUTHE_01225
symbol: rbsK
gene_biotype: protein_coding
description:
  Sugar kinase, ribokinase family; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.


ensembl_gene_id: RUTHE_01237
symbol: hisH
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase subunit hisH; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.


ensembl_gene_id: RUTHE_01239
symbol: hisA
gene_biotype: protein_coding
description:
  1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase.


ensembl_gene_id: RUTHE_01241
symbol: EPX86426.1
gene_biotype: protein_coding
description:
  Imidazoleglycerol-phosphate synthase; Overlaps another CDS with the same product name; Belongs to the HisA/HisF family.


ensembl_gene_id: RUTHE_01242
symbol: EPX86427.1
gene_biotype: protein_coding
description:
  Imidazoleglycerol-phosphate synthase; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.


ensembl_gene_id: RUTHE_01246
symbol: zwf
gene_biotype: protein_coding
description:
  Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.


ensembl_gene_id: RUTHE_01260
symbol: EPX86445.1
gene_biotype: protein_coding
description:
  2-isopropylmalate synthase/homocitrate synthase family protein; Belongs to the alpha-IPM synthase/homocitrate synthase family.


ensembl_gene_id: RUTHE_01266
symbol: tyrS
gene_biotype: protein_coding
description:
  tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily.


ensembl_gene_id: RUTHE_01269
symbol: eno
gene_biotype: protein_coding
description:
  Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.


ensembl_gene_id: RUTHE_01272
symbol: EPX86457.1
gene_biotype: protein_coding
description:
  Putative redox protein, regulator of disulfide bond formation; Belongs to the sulfur carrier protein TusA family.


ensembl_gene_id: RUTHE_01276
symbol: EPX86461.1
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase I; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to assist i [...]


ensembl_gene_id: RUTHE_01278
symbol: purS
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase, purS protein; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought [...]


ensembl_gene_id: RUTHE_01293
symbol: EPX86478.1
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase, biotin carboxylase subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: RUTHE_01294
symbol: aat
gene_biotype: protein_coding
description:
  leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine.


ensembl_gene_id: RUTHE_01299
symbol: EPX86484.1
gene_biotype: protein_coding
description:
  rRNA methylase, putative, group 3; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: RUTHE_01307
symbol: EPX86492.1
gene_biotype: protein_coding
description:
  Phosphoglycerate dehydrogenase and related dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: RUTHE_01313
symbol: cobT
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB).


ensembl_gene_id: RUTHE_01314
symbol: cobS
gene_biotype: protein_coding
description:
  Cobalamin-5'-phosphate synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.


ensembl_gene_id: RUTHE_01327
symbol: EPX86512.1
gene_biotype: protein_coding
description:
  Glutamate dehydrogenase/leucine dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.


ensembl_gene_id: RUTHE_01342
symbol: EPX86526.1
gene_biotype: protein_coding
description:
  Sulfate permease and related transporter (MFS superfamily); overlaps another CDS with the same product name.


ensembl_gene_id: RUTHE_01349
symbol: EPX86533.1
gene_biotype: protein_coding
description:
  NAD-dependent aldehyde dehydrogenase; Overlaps another CDS with the same product name; Belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: RUTHE_01352
symbol: EPX86536.1
gene_biotype: protein_coding
description:
  ABC-type spermidine/putrescine transport system, ATPase component; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: RUTHE_01360
symbol: EPX86544.1
gene_biotype: protein_coding
description:
  Choline dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate.


ensembl_gene_id: RUTHE_01361
symbol: betB
gene_biotype: protein_coding
description:
  Betaine aldehyde dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the reversible oxidation of betaine aldehyde to the corresponding acid.


ensembl_gene_id: RUTHE_01373
symbol: murD
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.


ensembl_gene_id: RUTHE_01378
symbol: EPX86562.1
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; Belongs to the MurCDEF family. MurE subfamily.


ensembl_gene_id: RUTHE_01381
symbol: rsmH
gene_biotype: protein_coding
description:
  S-adenosyl-methyltransferase MraW; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.


ensembl_gene_id: RUTHE_01383
symbol: EPX86567.1
gene_biotype: protein_coding
description:
  ATPase involved in chromosome partitioning; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.


ensembl_gene_id: RUTHE_01390
symbol: EPX86574.1
gene_biotype: protein_coding
description:
  Transporter, CPA2 family; TC 2.A.37; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.


ensembl_gene_id: RUTHE_01397
symbol: thyX
gene_biotype: protein_coding
description:
  Thymidylate synthase, flavin-dependent; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant.


ensembl_gene_id: RUTHE_01407
symbol: EPX86590.1
gene_biotype: protein_coding
description:
  ABC-type uncharacterized transport system, permease component; Belongs to the NiCoT transporter (TC 2.A.52) family.


ensembl_gene_id: RUTHE_01411
symbol: parE
gene_biotype: protein_coding
description:
  DNA topoisomerase IV subunit B; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 1 subfamily.


ensembl_gene_id: RUTHE_01412
symbol: EPX86595.1
gene_biotype: protein_coding
description:
  Putative Zn-dependent hydrolase of the beta-lactamase fold protein; Overlaps another CDS with the same product name.


ensembl_gene_id: RUTHE_01415
symbol: lolD
gene_biotype: protein_coding
description:
  ABC-type antimicrobial peptide transport system, ATPase component; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.


ensembl_gene_id: RUTHE_01418
symbol: proS
gene_biotype: protein_coding
description:
  prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro); Belongs to the class-II aminoacyl-tRNA synthetase family. ProS type 2 subfamily.


ensembl_gene_id: RUTHE_01421
symbol: ppk
gene_biotype: protein_coding
description:
  Polyphosphate kinase 1; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.


ensembl_gene_id: RUTHE_01444
symbol: coaX
gene_biotype: protein_coding
description:
  Pantothenate kinase, type III; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.


ensembl_gene_id: RUTHE_01446
symbol: nuoN
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family.


ensembl_gene_id: RUTHE_01449
symbol: nuoK
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit K; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family.


ensembl_gene_id: RUTHE_01450
symbol: EPX86632.1
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit J; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: RUTHE_01452
symbol: nuoI
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: RUTHE_01453
symbol: nuoH
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit H; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone.


ensembl_gene_id: RUTHE_01454
symbol: EPX86636.1
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit G; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family.


ensembl_gene_id: RUTHE_01457
symbol: EPX86639.1
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family.


ensembl_gene_id: RUTHE_01461
symbol: nuoD
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family.


ensembl_gene_id: RUTHE_01462
symbol: nuoC
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit C; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family.


ensembl_gene_id: RUTHE_01463
symbol: nuoA
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit A; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family.


ensembl_gene_id: RUTHE_01479
symbol: thrS
gene_biotype: protein_coding
description:
  threonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr).


ensembl_gene_id: RUTHE_01481
symbol: rlmJ
gene_biotype: protein_coding
description:
  Protein involved in catabolism of external DNA; Specifically methylates the adenine in position 2030 of 23S rRNA.


ensembl_gene_id: RUTHE_01485
symbol: EPX86667.1
gene_biotype: protein_coding
description:
  Amino acid ABC transporter substrate-binding protein, PAAT family; TC 3.A.1.3.-; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: RUTHE_01492
symbol: EPX86674.1
gene_biotype: protein_coding
description:
  Uncharacterized protein involved in cation transport; Catalyzes the cleavage of glutathione into 5-oxo-L-proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides; Belongs to the gamma-glutamylcyclotransferase family.


ensembl_gene_id: RUTHE_01496
symbol: hisC
gene_biotype: protein_coding
description:
  Histidinol phosphate aminotransferase apoenzyme; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.


ensembl_gene_id: RUTHE_01499
symbol: EPX86681.1
gene_biotype: protein_coding
description:
  Bacterial pre-peptidase; C-terminal domain including Hemolysin-type calcium-binding repeat (2 copies).


ensembl_gene_id: RUTHE_01501
symbol: rpsD
gene_biotype: protein_coding
description:
  SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.


ensembl_gene_id: RUTHE_01504
symbol: gltX-2
gene_biotype: protein_coding
description:
  glutamyl-tRNA synthetase, bacterial family; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.


ensembl_gene_id: RUTHE_01508
symbol: nadE
gene_biotype: protein_coding
description:
  NH(3)-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.


ensembl_gene_id: RUTHE_01519
symbol: mrdB
gene_biotype: protein_coding
description:
  Cell elongation-specific peptidoglycan biosynthesis regulator RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.


ensembl_gene_id: RUTHE_01528
symbol: EPX86710.1
gene_biotype: protein_coding
description:
  Tryptophan synthase, alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.


ensembl_gene_id: RUTHE_01535
symbol: EPX85961.1
gene_biotype: protein_coding
description:
  Protein tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.


ensembl_gene_id: RUTHE_01547
symbol: pyrB
gene_biotype: protein_coding
description:
  Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.


ensembl_gene_id: RUTHE_01552
symbol: EPX85831.1
gene_biotype: protein_coding
description:
  Phosphoserine aminotransferase apoenzyme; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine.


ensembl_gene_id: RUTHE_01553
symbol: EPX85832.1
gene_biotype: protein_coding
description:
  D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: RUTHE_01559
symbol: tdh
gene_biotype: protein_coding
description:
  L-threonine 3-dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-threonine to 2- amino-3-ketobutyrate; Belongs to the zinc-containing alcohol dehydrogenase family.


ensembl_gene_id: RUTHE_01566
symbol: folD
gene_biotype: protein_coding
description:
  5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.


ensembl_gene_id: RUTHE_01570
symbol: ftsH-2
gene_biotype: protein_coding
description:
  Membrane protease FtsH catalytic subunit; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family.  In the central section; belongs to the AAA ATPase family.


ensembl_gene_id: RUTHE_01572
symbol: tilS
gene_biotype: protein_coding
description:
  tRNA(Ile)-lysidine synthetase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.


ensembl_gene_id: RUTHE_01573
symbol: cpoB
gene_biotype: protein_coding
description:
  Tol-pal system protein YbgF; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family.


ensembl_gene_id: RUTHE_01574
symbol: pal
gene_biotype: protein_coding
description:
  Peptidoglycan-associated lipoprotein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.


ensembl_gene_id: RUTHE_01575
symbol: tolB
gene_biotype: protein_coding
description:
  Tol-pal system beta propeller repeat protein TolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.


ensembl_gene_id: RUTHE_01580
symbol: ruvB
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase subunit RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.


ensembl_gene_id: RUTHE_01584
symbol: EPX85863.1
gene_biotype: protein_coding
description:
  ABC-type sugar transport system, ATPase component; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: RUTHE_01598
symbol: msrA
gene_biotype: protein_coding
description:
  methionine-S-sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.


ensembl_gene_id: RUTHE_01600
symbol: crcB
gene_biotype: protein_coding
description:
  Camphor resistance protein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.


ensembl_gene_id: RUTHE_01606
symbol: xerC
gene_biotype: protein_coding
description:
  Site-specific recombinase XerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.


ensembl_gene_id: RUTHE_01612
symbol: psd
gene_biotype: protein_coding
description:
  Phosphatidylserine decarboxylase precursor-related protein; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).


ensembl_gene_id: RUTHE_01613
symbol: rpoH
gene_biotype: protein_coding
description:
  RNA polymerase, sigma 32 subunit, RpoH; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes.


ensembl_gene_id: RUTHE_01614
symbol: EPX85893.1
gene_biotype: protein_coding
description:
  Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: RUTHE_01621
symbol: EPX85900.1
gene_biotype: protein_coding
description:
  SOS regulatory protein LexA; Represses a number of genes involved in the response to DNA damage (SOS response).


ensembl_gene_id: RUTHE_01622
symbol: EPX85901.1
gene_biotype: protein_coding
description:
  Molybdopterin molybdochelatase; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.


ensembl_gene_id: RUTHE_01623
symbol: moaC
gene_biotype: protein_coding
description:
  Cyclic pyranopterin monophosphate synthase subunit MoaC; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family.


ensembl_gene_id: RUTHE_01625
symbol: EPX85904.1
gene_biotype: protein_coding
description:
  Condensin subunit ScpB; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: RUTHE_01626
symbol: EPX85905.1
gene_biotype: protein_coding
description:
  Condensin subunit ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: RUTHE_01630
symbol: EPX85909.1
gene_biotype: protein_coding
description:
  Deoxyguanosinetriphosphate triphosphohydrolase, putative; Belongs to the dGTPase family. Type 2 subfamily.


ensembl_gene_id: RUTHE_01634
symbol: dksA
gene_biotype: protein_coding
description:
  Transcriptional regulator, TraR/DksA family; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters.


ensembl_gene_id: RUTHE_01640
symbol: pepA
gene_biotype: protein_coding
description:
  Leucyl aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.


ensembl_gene_id: RUTHE_01643
symbol: lptD
gene_biotype: protein_coding
description:
  Organic solvent tolerance protein OstA; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.


ensembl_gene_id: RUTHE_01646
symbol: rsmA
gene_biotype: protein_coding
description:
  Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.


ensembl_gene_id: RUTHE_01649
symbol: prfA
gene_biotype: protein_coding
description:
  Bacterial peptide chain release factor 1 (bRF-1); Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.


ensembl_gene_id: RUTHE_01651
symbol: EPX85930.1
gene_biotype: protein_coding
description:
  Glutamine synthetase adenylyltransferase; Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transducti [...]


ensembl_gene_id: RUTHE_01658
symbol: EPX85937.1
gene_biotype: protein_coding
description:
  TRAP-type mannitol/chloroaromatic compound transport system, large permease component; Overlaps another CDS with the same product name.


ensembl_gene_id: RUTHE_01660
symbol: EPX85939.1
gene_biotype: protein_coding
description:
  TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.


ensembl_gene_id: RUTHE_01666
symbol: rnd
gene_biotype: protein_coding
description:
  Ribonuclease D; Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides; Belongs to the RNase D family.


ensembl_gene_id: RUTHE_01667
symbol: purN
gene_biotype: protein_coding
description:
  Phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.


ensembl_gene_id: RUTHE_01672
symbol: EPX85950.1
gene_biotype: protein_coding
description:
  Molybdate ABC transporter, permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: RUTHE_01674
symbol: EPX85952.1
gene_biotype: protein_coding
description:
  Trehalose 6-phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.


ensembl_gene_id: RUTHE_01676
symbol: EPX85954.1
gene_biotype: protein_coding
description:
  Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.


ensembl_gene_id: RUTHE_01685
symbol: EPX85756.1
gene_biotype: protein_coding
description:
  2-octaprenyl-6-methoxyphenol hydroxylase/2-octaprenyl-3-methyl-6-methoxy-1, 4-benzoquinol hydroxylase.


ensembl_gene_id: RUTHE_01686
symbol: asd
gene_biotype: protein_coding
description:
  Aspartate semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.


ensembl_gene_id: RUTHE_01688
symbol: EPX85759.1
gene_biotype: protein_coding
description:
  Oxygen-independent coproporphyrinogen III oxidase; Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: RUTHE_01699
symbol: prfB
gene_biotype: protein_coding
description:
  Bacterial peptide chain release factor 2 (bRF-2); Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.


ensembl_gene_id: RUTHE_01704
symbol: ispG
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family.


ensembl_gene_id: RUTHE_01730
symbol: EPX85470.1
gene_biotype: protein_coding
description:
  Oligopeptide/dipeptide ABC transporter; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: RUTHE_01737
symbol: kduI
gene_biotype: protein_coding
description:
  4-deoxy-L-threo-5-hexulose uronate isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family.


ensembl_gene_id: RUTHE_01761
symbol: rlmN
gene_biotype: protein_coding
description:
  23S rRNA methyltransferase; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family.


ensembl_gene_id: RUTHE_01773
symbol: lysA
gene_biotype: protein_coding
description:
  Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.


ensembl_gene_id: RUTHE_01779
symbol: mscL
gene_biotype: protein_coding
description:
  Large conductance mechanosensitive channel protein; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell.


ensembl_gene_id: RUTHE_01781
symbol: EPX85189.1
gene_biotype: protein_coding
description:
  EMAP domain protein; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.


ensembl_gene_id: RUTHE_01782
symbol: pheS
gene_biotype: protein_coding
description:
  phenylalanyl-tRNA synthetase, alpha subunit; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.


ensembl_gene_id: RUTHE_01784
symbol: rplT
gene_biotype: protein_coding
description:
  LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.


ensembl_gene_id: RUTHE_01796
symbol: EPX85088.1
gene_biotype: protein_coding
description:
  Molybdenum cofactor biosynthesis protein B, proteobacterial; May be involved in the biosynthesis of molybdopterin. Belongs to the MoaB/Mog family.


ensembl_gene_id: RUTHE_01800
symbol: dnaX
gene_biotype: protein_coding
description:
  DNA polymerase III, subunit gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: RUTHE_01801
symbol: EPX85074.1
gene_biotype: protein_coding
description:
  DNA-binding protein, YbaB/EbfC family; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.


ensembl_gene_id: RUTHE_01802
symbol: recR
gene_biotype: protein_coding
description:
  DNA replication and repair protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.


ensembl_gene_id: RUTHE_01805
symbol: metG
gene_biotype: protein_coding
description:
  methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.


ensembl_gene_id: RUTHE_01815
symbol: EPX84818.1
gene_biotype: protein_coding
description:
  Catalase (peroxidase I); Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily.


ensembl_gene_id: RUTHE_01820
symbol: EPX84823.1
gene_biotype: protein_coding
description:
  Short-chain alcohol dehydrogenase of unknown specificity; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: RUTHE_01854
symbol: EPX84857.1
gene_biotype: protein_coding
description:
  Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidase; Belongs to the amidase family.


ensembl_gene_id: RUTHE_01871
symbol: EPX84874.1
gene_biotype: protein_coding
description:
  Outer membrane lipoprotein-sorting protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).


ensembl_gene_id: RUTHE_01879
symbol: dapA
gene_biotype: protein_coding
description:
  Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).


ensembl_gene_id: RUTHE_01884
symbol: EPX84887.1
gene_biotype: protein_coding
description:
  Thiol peroxidase (atypical 2-Cys peroxiredoxin); Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily.


ensembl_gene_id: RUTHE_01900
symbol: EPX84903.1
gene_biotype: protein_coding
description:
  Uncharacterized protein putative in bacteria; A possible function for this protein is to guide the assembly of the membrane sector of the ATPase enzyme complex.


ensembl_gene_id: RUTHE_01901
symbol: atpB
gene_biotype: protein_coding
description:
  ATP synthase F0 subcomplex A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.


ensembl_gene_id: RUTHE_01903
symbol: atpF
gene_biotype: protein_coding
description:
  F0F1-type ATP synthase, subunit b; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.


ensembl_gene_id: RUTHE_01904
symbol: atpF-2
gene_biotype: protein_coding
description:
  ATP synthase F0 subcomplex B subunit; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.


ensembl_gene_id: RUTHE_01907
symbol: nth
gene_biotype: protein_coding
description:
  DNA-(apurinic or apyrimidinic site) lyase/endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.


ensembl_gene_id: RUTHE_01918
symbol: EPX84921.1
gene_biotype: protein_coding
description:
  16S RNA methylase RsmC; G1207; overlaps another CDS with the same product name; Belongs to the methyltransferase superfamily.


ensembl_gene_id: RUTHE_01920
symbol: clpS
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.


ensembl_gene_id: RUTHE_01924
symbol: EPX84927.1
gene_biotype: protein_coding
description:
  ABC-type uncharacterized transport system, duplicated ATPase component; Belongs to the ABC transporter superfamily.


ensembl_gene_id: RUTHE_01930
symbol: hemE
gene_biotype: protein_coding
description:
  Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.


ensembl_gene_id: RUTHE_01947
symbol: thiQ
gene_biotype: protein_coding
description:
  ABC-type thiamine transport system, ATPase component; Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Thiamine importer (TC 3.A.1.19.1) family.


ensembl_gene_id: RUTHE_01967
symbol: EPX84608.1
gene_biotype: protein_coding
description:
  Cytochrome b subunit of the bc complex; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.


ensembl_gene_id: RUTHE_01977
symbol: pnp
gene_biotype: protein_coding
description:
  Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.


ensembl_gene_id: RUTHE_01978
symbol: rpsO
gene_biotype: protein_coding
description:
  SSU ribosomal protein S15P; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.


ensembl_gene_id: RUTHE_01987
symbol: EPX84628.1
gene_biotype: protein_coding
description:
  Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate.


ensembl_gene_id: RUTHE_02026
symbol: EPX84666.1
gene_biotype: protein_coding
description:
  Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.


ensembl_gene_id: RUTHE_02034
symbol: EPX84674.1
gene_biotype: protein_coding
description:
  Putative anaerobic dehydrogenase; Overlaps another CDS with the same product name; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: RUTHE_02048
symbol: truA
gene_biotype: protein_coding
description:
  Pseudouridylate synthase I; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.


ensembl_gene_id: RUTHE_02049
symbol: EPX84689.1
gene_biotype: protein_coding
description:
  CDP-diacylglycerol-choline O-phosphatidyltransferase; Condenses choline with CDP-diglyceride to produce phosphatidylcholine and CMP; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: RUTHE_02051
symbol: ileS
gene_biotype: protein_coding
description:
  Isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily.


ensembl_gene_id: RUTHE_02053
symbol: efp
gene_biotype: protein_coding
description:
  Translation elongation factor P (EF-P); Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.


ensembl_gene_id: RUTHE_02055
symbol: EPX84695.1
gene_biotype: protein_coding
description:
  Lactate dehydrogenase and related dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: RUTHE_02062
symbol: EPX84702.1
gene_biotype: protein_coding
description:
  2-oxoglutarate dehydrogenase E2 component; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2).


ensembl_gene_id: RUTHE_02064
symbol: sucD
gene_biotype: protein_coding
description:
  succinyl-CoA synthetase (ADP-forming) alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.


ensembl_gene_id: RUTHE_02066
symbol: sucC
gene_biotype: protein_coding
description:
  succinyl-CoA synthetase (ADP-forming) beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.


ensembl_gene_id: RUTHE_02069
symbol: mdh
gene_biotype: protein_coding
description:
  Malate dehydrogenase (NAD); Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.


ensembl_gene_id: RUTHE_02076
symbol: EPX84716.1
gene_biotype: protein_coding
description:
  Purine nucleotide phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.


ensembl_gene_id: RUTHE_02086
symbol: trpS
gene_biotype: protein_coding
description:
  tryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: RUTHE_02088
symbol: murJ
gene_biotype: protein_coding
description:
  Integral membrane protein MviN; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.


ensembl_gene_id: RUTHE_02089
symbol: glnD
gene_biotype: protein_coding
description:
  UTP--GlnB (protein PII) uridylyltransferase, GlnD; Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen metabolism.


ensembl_gene_id: RUTHE_02091
symbol: rsmI
gene_biotype: protein_coding
description:
  Putative S-adenosylmethionine-dependent methyltransferase, YraL family; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.


ensembl_gene_id: RUTHE_02092
symbol: EPX84547.1
gene_biotype: protein_coding
description:
  Putative endonuclease; Distantly related to archaeal Holliday junction resolvase; Belongs to the UPF0102 family.


ensembl_gene_id: RUTHE_02097
symbol: EPX84552.1
gene_biotype: protein_coding
description:
  Adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase; Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate.


ensembl_gene_id: RUTHE_02099
symbol: EPX84554.1
gene_biotype: protein_coding
description:
  Phosphopantothenate-cysteine ligase/Phosphopantothenoylcysteine decarboxylase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.


ensembl_gene_id: RUTHE_02100
symbol: dut
gene_biotype: protein_coding
description:
  Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family.


ensembl_gene_id: RUTHE_02123
symbol: EPX84539.1
gene_biotype: protein_coding
description:
  Bacterial polymer biosynthesis protein, WecB/TagA/CpsF family; Belongs to the glycosyltransferase 26 family.


ensembl_gene_id: RUTHE_02135
symbol: uvrC
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.


ensembl_gene_id: RUTHE_02140
symbol: uppP
gene_biotype: protein_coding
description:
  Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.


ensembl_gene_id: RUTHE_02147
symbol: EPX84532.1
gene_biotype: protein_coding
description:
  Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors. Belongs to the glycosyltransferase 51 family.


ensembl_gene_id: RUTHE_02155
symbol: gmd
gene_biotype: protein_coding
description:
  GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.


ensembl_gene_id: RUTHE_02158
symbol: EPX84478.1
gene_biotype: protein_coding
description:
  Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family.


ensembl_gene_id: RUTHE_02164
symbol: pncB
gene_biotype: protein_coding
description:
  Nicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family.


ensembl_gene_id: RUTHE_02185
symbol: dnaJ
gene_biotype: protein_coding
description:
  Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...]


ensembl_gene_id: RUTHE_02196
symbol: ureG
gene_biotype: protein_coding
description:
  Urease accessory protein UreG; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG.


ensembl_gene_id: RUTHE_02197
symbol: ureF
gene_biotype: protein_coding
description:
  Urease accessory protein UreF; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.


ensembl_gene_id: RUTHE_02198
symbol: EPX84395.1
gene_biotype: protein_coding
description:
  Urease accessory protein UreE; Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly.


ensembl_gene_id: RUTHE_02203
symbol: ureD
gene_biotype: protein_coding
description:
  Urease accessory protein UreH; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.


ensembl_gene_id: RUTHE_02208
symbol: tsaD
gene_biotype: protein_coding
description:
  O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.


ensembl_gene_id: RUTHE_02209
symbol: gpsA
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate dehydrogenase; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: RUTHE_02211
symbol: ahcY
gene_biotype: protein_coding
description:
  Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.


ensembl_gene_id: RUTHE_02219
symbol: EPX84415.1
gene_biotype: protein_coding
description:
  Nucleoside-diphosphate-sugar pyrophosphorylase; Involved in lipopolysaccharide biosynthesis/translation initiation factor 2B; gamma/epsilon subunit (eIF-2Bgamma/eIF-2Bepsilon).


ensembl_gene_id: RUTHE_02223
symbol: EPX84419.1
gene_biotype: protein_coding
description:
  ATP-dependent exoDNAse (exonuclease V) beta subunit; Contains helicase and exonuclease domain protein.


ensembl_gene_id: RUTHE_02225
symbol: hslV
gene_biotype: protein_coding
description:
  HslV component of HslUV peptidase, Threonine peptidase, MEROPS family T01B; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery.


ensembl_gene_id: RUTHE_02226
symbol: hslU
gene_biotype: protein_coding
description:
  ATP-dependent protease HslVU, ATPase subunit; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis.


ensembl_gene_id: RUTHE_02233
symbol: secB
gene_biotype: protein_coding
description:
  Protein translocase subunit secB; One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA.


ensembl_gene_id: RUTHE_02234
symbol: dnaQ
gene_biotype: protein_coding
description:
  DNA polymerase III, epsilon subunit, Proteobacterial; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease.


ensembl_gene_id: RUTHE_02235
symbol: coaE
gene_biotype: protein_coding
description:
  dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.


ensembl_gene_id: RUTHE_02239
symbol: rho
gene_biotype: protein_coding
description:
  Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.


ensembl_gene_id: RUTHE_02240
symbol: mnmE
gene_biotype: protein_coding
description:
  tRNA modification GTPase trmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.


ensembl_gene_id: RUTHE_02241
symbol: mnmG
gene_biotype: protein_coding
description:
  Glucose-inhibited division protein A; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.


ensembl_gene_id: RUTHE_02244
symbol: EPX84440.1
gene_biotype: protein_coding
description:
  CobQ/CobB/MinD/ParA nucleotide binding domain protein; Overlaps another CDS with the same product name.


ensembl_gene_id: RUTHE_02247
symbol: EPX84443.1
gene_biotype: protein_coding
description:
  2-octaprenylphenol hydroxylase; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis. Belongs to the ABC1 family. UbiB subfamily.


ensembl_gene_id: RUTHE_02248
symbol: ubiE
gene_biotype: protein_coding
description:
  Demethylmenaquinone methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2).


ensembl_gene_id: RUTHE_02249
symbol: mutM
gene_biotype: protein_coding
description:
  formamidopyrimidine-DNA glycosylase (fpg); Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates.


ensembl_gene_id: RUTHE_02256
symbol: recF
gene_biotype: protein_coding
description:
  DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family.


ensembl_gene_id: RUTHE_02258
symbol: gyrB
gene_biotype: protein_coding
description:
  DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: RUTHE_02262
symbol: EPX84458.1
gene_biotype: protein_coding
description:
  Related to tRNA (uracil-5-)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.


ensembl_gene_id: RUTHE_02266
symbol: EPX84462.1
gene_biotype: protein_coding
description:
  tRNA nucleotidyltransferase/poly(A) polymerase; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.


ensembl_gene_id: RUTHE_02268
symbol: EPX84464.1
gene_biotype: protein_coding
description:
  Disulfide bond chaperones of the HSP33 family; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress; Belongs to the HSP33 family.


ensembl_gene_id: RUTHE_02271
symbol: vapC
gene_biotype: protein_coding
description:
  Putative nucleic acid-binding protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.


ensembl_gene_id: RUTHE_02281
symbol: cas1
gene_biotype: protein_coding
description:
  CRISPR-associated protein, Cas1 family; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.


ensembl_gene_id: RUTHE_02292
symbol: EPX84386.1
gene_biotype: protein_coding
description:
  Distinct helicase family; With a unique C-terminal domain including a metal-binding cysteine cluster; overlaps another CDS with the same product name.


ensembl_gene_id: RUTHE_02314
symbol: EPX84355.1
gene_biotype: protein_coding
description:
  Variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E.


ensembl_gene_id: RUTHE_02315
symbol: hemH
gene_biotype: protein_coding
description:
  Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.


ensembl_gene_id: RUTHE_02318
symbol: EPX84359.1
gene_biotype: protein_coding
description:
  Glutaredoxin, GrxC family; Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins.


ensembl_gene_id: RUTHE_02320
symbol: EPX84361.1
gene_biotype: protein_coding
description:
  Ubiquinone biosynthesis O-methyltransferase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway. Belongs to the methyltransferase superfamily. UbiG/COQ3 family.


ensembl_gene_id: RUTHE_02324
symbol: rimP
gene_biotype: protein_coding
description:
  Uncharacterized protein putative in bacteria; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.


ensembl_gene_id: RUTHE_02327
symbol: EPX84117.1
gene_biotype: protein_coding
description:
  Bacterial translation initiation factor 2 (bIF-2); One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex.


ensembl_gene_id: RUTHE_02330
symbol: argJ
gene_biotype: protein_coding
description:
  Glutamate N-acetyltransferase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family.


ensembl_gene_id: RUTHE_02332
symbol: secA
gene_biotype: protein_coding
description:
  Protein translocase subunit secA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. Belongs to the SecA family.


ensembl_gene_id: RUTHE_02340
symbol: dxs
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.


ensembl_gene_id: RUTHE_02342
symbol: xseB
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.


ensembl_gene_id: RUTHE_02350
symbol: grpE
gene_biotype: protein_coding
description:
  Molecular chaperone GrpE (heat shock protein); Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle.  [...]


ensembl_gene_id: RUTHE_02351
symbol: hrcA
gene_biotype: protein_coding
description:
  Heat-inducible transcription repressor HrcA; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons.


ensembl_gene_id: RUTHE_02352
symbol: rph
gene_biotype: protein_coding
description:
  RNAse PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation.


ensembl_gene_id: RUTHE_02353
symbol: EPX84143.1
gene_biotype: protein_coding
description:
  dITPase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.


ensembl_gene_id: RUTHE_02354
symbol: EPX84144.1
gene_biotype: protein_coding
description:
  Putative oxygen-independent coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: RUTHE_02355
symbol: EPX84145.1
gene_biotype: protein_coding
description:
  Flagellar hook capping protein; Required for flagellar hook formation. May act as a scaffolding protein.


ensembl_gene_id: RUTHE_02359
symbol: EPX84149.1
gene_biotype: protein_coding
description:
  Flagellin/related hook-associated protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.


ensembl_gene_id: RUTHE_02369
symbol: EPX84159.1
gene_biotype: protein_coding
description:
  Flagellar basal-body rod protein FlgG, Gram-negative bacteria; Belongs to the flagella basal body rod proteins family.


ensembl_gene_id: RUTHE_02372
symbol: EPX84162.1
gene_biotype: protein_coding
description:
  Flagellar basal body L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.


ensembl_gene_id: RUTHE_02373
symbol: EPX84163.1
gene_biotype: protein_coding
description:
  Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.


ensembl_gene_id: RUTHE_02377
symbol: flhA
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.


ensembl_gene_id: RUTHE_02388
symbol: fliP
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.


ensembl_gene_id: RUTHE_02389
symbol: flgI
gene_biotype: protein_coding
description:
  Flagellar basal-body P-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.


ensembl_gene_id: RUTHE_02402
symbol: tal
gene_biotype: protein_coding
description:
  Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.


ensembl_gene_id: RUTHE_02408
symbol: ispE
gene_biotype: protein_coding
description:
  4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.


ensembl_gene_id: RUTHE_02412
symbol: greA
gene_biotype: protein_coding
description:
  Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.


ensembl_gene_id: RUTHE_02429
symbol: pckA
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate carboxykinase (ATP); Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA.


ensembl_gene_id: RUTHE_02436
symbol: tuf
gene_biotype: protein_coding
description:
  Translation elongation factor 1A (EF-1A/EF-Tu); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.


ensembl_gene_id: RUTHE_02437
symbol: rpsJ
gene_biotype: protein_coding
description:
  SSU ribosomal protein S10P; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.


ensembl_gene_id: RUTHE_02438
symbol: rplC
gene_biotype: protein_coding
description:
  LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.


ensembl_gene_id: RUTHE_02440
symbol: rplW
gene_biotype: protein_coding
description:
  LSU ribosomal protein L23P; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.


ensembl_gene_id: RUTHE_02441
symbol: rplB
gene_biotype: protein_coding
description:
  LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.


ensembl_gene_id: RUTHE_02442
symbol: rpsS
gene_biotype: protein_coding
description:
  SSU ribosomal protein S19P; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.


ensembl_gene_id: RUTHE_02443
symbol: rplV
gene_biotype: protein_coding
description:
  LSU ribosomal protein L22P; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.


ensembl_gene_id: RUTHE_02444
symbol: rpsC
gene_biotype: protein_coding
description:
  SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.


ensembl_gene_id: RUTHE_02445
symbol: rplP
gene_biotype: protein_coding
description:
  LSU ribosomal protein L16P; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.


ensembl_gene_id: RUTHE_02447
symbol: rpsQ
gene_biotype: protein_coding
description:
  SSU ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.


ensembl_gene_id: RUTHE_02448
symbol: rplN
gene_biotype: protein_coding
description:
  LSU ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.


ensembl_gene_id: RUTHE_02449
symbol: rplX
gene_biotype: protein_coding
description:
  LSU ribosomal protein L24P; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.


ensembl_gene_id: RUTHE_02450
symbol: rplE
gene_biotype: protein_coding
description:
  LSU ribosomal protein L5P; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.


ensembl_gene_id: RUTHE_02451
symbol: rpsN
gene_biotype: protein_coding
description:
  SSU ribosomal protein S14P; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.


ensembl_gene_id: RUTHE_02452
symbol: rpsH
gene_biotype: protein_coding
description:
  SSU ribosomal protein S8P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.


ensembl_gene_id: RUTHE_02453
symbol: rplF
gene_biotype: protein_coding
description:
  LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.


ensembl_gene_id: RUTHE_02454
symbol: rplR
gene_biotype: protein_coding
description:
  LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.


ensembl_gene_id: RUTHE_02455
symbol: rpsE
gene_biotype: protein_coding
description:
  SSU ribosomal protein S5P; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.


ensembl_gene_id: RUTHE_02457
symbol: rplO
gene_biotype: protein_coding
description:
  LSU ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.


ensembl_gene_id: RUTHE_02458
symbol: secY
gene_biotype: protein_coding
description:
  Protein translocase subunit secY/sec61 alpha; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.


ensembl_gene_id: RUTHE_02459
symbol: adk
gene_biotype: protein_coding
description:
  Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.


ensembl_gene_id: RUTHE_02460
symbol: rpsM
gene_biotype: protein_coding
description:
  SSU ribosomal protein S13P; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.


ensembl_gene_id: RUTHE_02461
symbol: rpsK
gene_biotype: protein_coding
description:
  SSU ribosomal protein S11P; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.


ensembl_gene_id: RUTHE_02462
symbol: rpoA
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: RUTHE_02475
symbol: argB
gene_biotype: protein_coding
description:
  N-acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.


ensembl_gene_id: RUTHE_02476
symbol: engB
gene_biotype: protein_coding
description:
  Protein translocase subunit yidC; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.


ensembl_gene_id: RUTHE_02478
symbol: ttcA
gene_biotype: protein_coding
description:
  Putative ATPase of the PP-loop superfamily implicated in cell cycle control; Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine/cysteine desulfurase (IscS) system.


ensembl_gene_id: RUTHE_02479
symbol: EPX84267.1
gene_biotype: protein_coding
description:
  Putative hypothetical protein YidD; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.


ensembl_gene_id: RUTHE_02480
symbol: rnpA
gene_biotype: protein_coding
description:
  Ribonuclease P protein component, eubacterial; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.


ensembl_gene_id: RUTHE_02484
symbol: potA
gene_biotype: protein_coding
description:
  Spermidine/putrescine ABC transporter ATP-binding subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.


ensembl_gene_id: RUTHE_02492
symbol: tmk
gene_biotype: protein_coding
description:
  Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.


ensembl_gene_id: RUTHE_02497
symbol: EPX84283.1
gene_biotype: protein_coding
description:
  Type I site-specific deoxyribonuclease, HsdR family; Subunit R is required for both nuclease and ATPase activities, but not for modification.


ensembl_gene_id: RUTHE_02511
symbol: EPX84297.1
gene_biotype: protein_coding
description:
  ABC-type transport system involved in cytochrome bd biosynthesis; Fused ATPase and permease component.


ensembl_gene_id: RUTHE_02579
symbol: EPX83782.1
gene_biotype: protein_coding
description:
  3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase; Overlaps another CDS with the same product name.


ensembl_gene_id: RUTHE_02584
symbol: nadA
gene_biotype: protein_coding
description:
  valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.


ensembl_gene_id: RUTHE_02587
symbol: EPX83790.1
gene_biotype: protein_coding
description:
  5,10-methylenetetrahydrofolate reductase (NAD(P)); Belongs to the methylenetetrahydrofolate reductase family.


ensembl_gene_id: RUTHE_02593
symbol: gatC
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.


ensembl_gene_id: RUTHE_02594
symbol: gatA
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).


ensembl_gene_id: RUTHE_02620
symbol: znuC
gene_biotype: protein_coding
description:
  ABC-type Mn/Zn transport system, ATPase component; Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Zinc importer (TC 3.A.1.15.5) family.


ensembl_gene_id: RUTHE_02625
symbol: rpiA
gene_biotype: protein_coding
description:
  Ribose-5-phosphate isomerase; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.


ensembl_gene_id: RUTHE_02631
symbol: lgt
gene_biotype: protein_coding
description:
  Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.


ensembl_gene_id: RUTHE_02634
symbol: proC
gene_biotype: protein_coding
description:
  Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.


ensembl_gene_id: RUTHE_02644
symbol: EPX83755.1
gene_biotype: protein_coding
description:
  Thiamine pyrophosphate enzyme, C-terminal TPP binding domain/Thiamine pyrophosphate enzyme; Central domain.


ensembl_gene_id: RUTHE_02650
symbol: EPX83699.1
gene_biotype: protein_coding
description:
  N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductase; Coenzyme F420-dependent.


ensembl_gene_id: RUTHE_02681
symbol: dapF
gene_biotype: protein_coding
description:
  Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.


ensembl_gene_id: RUTHE_02685
symbol: hemC
gene_biotype: protein_coding
description:
  Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.


ensembl_gene_id: RUTHE_02686
symbol: secE
gene_biotype: protein_coding
description:
  Protein translocase subunit secE/sec61 gamma; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.


ensembl_gene_id: RUTHE_02687
symbol: nusG
gene_biotype: protein_coding
description:
  Transcription antitermination protein nusG; Participates in transcription elongation, termination and antitermination.


ensembl_gene_id: RUTHE_02688
symbol: rplK
gene_biotype: protein_coding
description:
  LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.


ensembl_gene_id: RUTHE_02689
symbol: rplA
gene_biotype: protein_coding
description:
  LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.


ensembl_gene_id: RUTHE_02690
symbol: EPX83397.1
gene_biotype: protein_coding
description:
  Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.


ensembl_gene_id: RUTHE_02691
symbol: rplL
gene_biotype: protein_coding
description:
  LSU ribosomal protein L12P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.


ensembl_gene_id: RUTHE_02693
symbol: rpoB
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: RUTHE_02694
symbol: rpoC
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase, beta' subunit, predominant form; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: RUTHE_02697
symbol: rpsL
gene_biotype: protein_coding
description:
  SSU ribosomal protein S12P; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.


ensembl_gene_id: RUTHE_02698
symbol: rpsG
gene_biotype: protein_coding
description:
  SSU ribosomal protein S7P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.


ensembl_gene_id: RUTHE_02699
symbol: fusA
gene_biotype: protein_coding
description:
  Translation elongation factor 2 (EF-2/EF-G); Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. [...]


ensembl_gene_id: RUTHE_02715
symbol: EPX83098.1
gene_biotype: protein_coding
description:
  Putative hypothetical integral membrane protein; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage; Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily.


ensembl_gene_id: RUTHE_02721
symbol: ilvE
gene_biotype: protein_coding
description:
  Branched chain amino acid aminotransferase apoenzyme; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: RUTHE_02729
symbol: EPX83112.1
gene_biotype: protein_coding
description:
  Product; Related to short-chain alcohol dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: RUTHE_02748
symbol: queG
gene_biotype: protein_coding
description:
  Putative Fe-S protein; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr); Belongs to the QueG family.


ensembl_gene_id: RUTHE_02754
symbol: EPX83137.1
gene_biotype: protein_coding
description:
  Multisubunit potassium/proton antiporter, PhaA subunit/multisubunit potassium/proton antiporter; TC 2.A.63.1.1; TC 2.A.63.1.1; PhaB subunit.


ensembl_gene_id: RUTHE_02757
symbol: EPX83140.1
gene_biotype: protein_coding
description:
  Cytochrome c oxidase, subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.


ensembl_gene_id: RUTHE_02762
symbol: EPX83145.1
gene_biotype: protein_coding
description:
  Putative signal-transduction protein; Containing cAMP-binding and CBS domains; overlaps another CDS with the same product name.


ensembl_gene_id: RUTHE_02766
symbol: EPX83149.1
gene_biotype: protein_coding
description:
  Putative sodium:solute symporter subfamily; VC_2705; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.


ensembl_gene_id: RUTHE_02768
symbol: EPX83151.1
gene_biotype: protein_coding
description:
  Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase; Overlaps another CDS with the same product name.


ensembl_gene_id: RUTHE_02774
symbol: mtnA
gene_biotype: protein_coding
description:
  Methylthioribose-1-phosphate isomerase; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P).


ensembl_gene_id: RUTHE_02775
symbol: mtnK
gene_biotype: protein_coding
description:
  5'-methylthioribose kinase; Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate.


ensembl_gene_id: RUTHE_02784
symbol: EPX83167.1
gene_biotype: protein_coding
description:
  Cation diffusion facilitator family transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.


ensembl_gene_id: RUTHE_02786
symbol: EPX83169.1
gene_biotype: protein_coding
description:
  RNA methyltransferase, RsmE family; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.


ensembl_gene_id: RUTHE_02790
symbol: EPX83173.1
gene_biotype: protein_coding
description:
  Translation factor SUA5; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.


ensembl_gene_id: RUTHE_02795
symbol: EPX83178.1
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate-protein phosphotransferase; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr).


ensembl_gene_id: RUTHE_02832
symbol: EPX83208.1
gene_biotype: protein_coding
description:
  4-aminobutyrate aminotransferase apoenzyme; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: RUTHE_02845
symbol: leuC
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydratase, large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.


ensembl_gene_id: RUTHE_02846
symbol: EPX83222.1
gene_biotype: protein_coding
description:
  N-methylhydantoinase A/acetone carboxylase, beta subunit; Overlaps another CDS with the same product name.


ensembl_gene_id: RUTHE_02850
symbol: EPX83226.1
gene_biotype: protein_coding
description:
  Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: RUTHE_02855
symbol: EPX83231.1
gene_biotype: protein_coding
description:
  Multiple monosaccharide ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: RUTHE_02861
symbol: EPX83237.1
gene_biotype: protein_coding
description:
  Succinate dehydrogenase subunit A; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.


ensembl_gene_id: RUTHE_02865
symbol: EPX83241.1
gene_biotype: protein_coding
description:
  Succinate dehydrogenase subunit B; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.


ensembl_gene_id: RUTHE_02867
symbol: EPX83243.1
gene_biotype: protein_coding
description:
  Phosphate ABC transporter membrane protein 1, PhoT family; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: RUTHE_02869
symbol: pstB
gene_biotype: protein_coding
description:
  Phosphate ABC transporter ATP-binding protein, PhoT family; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.


ensembl_gene_id: RUTHE_02896
symbol: glyA
gene_biotype: protein_coding
description:
  Glycine/serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.


ensembl_gene_id: RUTHE_02897
symbol: nadK
gene_biotype: protein_coding
description:
  Putative sugar kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.


ensembl_gene_id: RUTHE_02912
symbol: lcdH
gene_biotype: protein_coding
description:
  3-hydroxyacyl-CoA dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-carnitine to 3- dehydrocarnitine.


ensembl_gene_id: RUTHE_02915
symbol: EPX83289.1
gene_biotype: protein_coding
description:
  Transcriptional regulator; Containing an amidase domain and an AraC-type DNA-binding HTH domain protein; overlaps another CDS with the same product name.


ensembl_gene_id: RUTHE_02921
symbol: EPX83295.1
gene_biotype: protein_coding
description:
  ATPase component of various ABC-type transport system; Contains duplicated ATPase; Belongs to the ABC transporter superfamily.


ensembl_gene_id: RUTHE_02942
symbol: EPX83316.1
gene_biotype: protein_coding
description:
  Bacterial transferase hexapeptide (six repeats); Belongs to the transferase hexapeptide repeat family.


ensembl_gene_id: RUTHE_02946
symbol: plsY
gene_biotype: protein_coding
description:
  Acyl-phosphate glycerol-3-phosphate acyltransferase; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.


ensembl_gene_id: RUTHE_02949
symbol: EPX83323.1
gene_biotype: protein_coding
description:
  Glutamate--cysteine ligase, plant type; Catalyzes the synthesis of gamma-glutamylcysteine (gamma-GC). Belongs to the glutamate--cysteine ligase type 2 family. EgtA subfamily.


ensembl_gene_id: RUTHE_02952
symbol: dapE
gene_biotype: protein_coding
description:
  Succinyldiaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily.


ensembl_gene_id: RUTHE_02954
symbol: rnr
gene_biotype: protein_coding
description:
  RNAse R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.


ensembl_gene_id: RUTHE_02958
symbol: rplU
gene_biotype: protein_coding
description:
  Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.


ensembl_gene_id: RUTHE_02961
symbol: pyrE
gene_biotype: protein_coding
description:
  Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).


ensembl_gene_id: RUTHE_02970
symbol: tpiA
gene_biotype: protein_coding
description:
  Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.


ensembl_gene_id: RUTHE_02975
symbol: EPX83030.1
gene_biotype: protein_coding
description:
  T/G mismatch-specific endonuclease; May nick specific sequences that contain T:G mispairs resulting from m5C-deamination.


ensembl_gene_id: RUTHE_02976
symbol: EPX83031.1
gene_biotype: protein_coding
description:
  Site-specific DNA methylase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.


ensembl_gene_id: RUTHE_03004
symbol: EPX82933.1
gene_biotype: protein_coding
description:
  Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase; Overlaps another CDS with the same product name.


ensembl_gene_id: RUTHE_03006
symbol: thiE
gene_biotype: protein_coding
description:
  Thiamine-phosphate diphosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.


ensembl_gene_id: RUTHE_03007
symbol: thiM
gene_biotype: protein_coding
description:
  Hydroxyethylthiazole kinase; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family.


ensembl_gene_id: RUTHE_03078
symbol: EPX82854.1
gene_biotype: protein_coding
description:
  Hydroxyisourate hydrolase; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.


ensembl_gene_id: RUTHE_03081
symbol: smpB
gene_biotype: protein_coding
description:
  SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...]


ensembl_gene_id: RUTHE_03082
symbol: EPX82858.1
gene_biotype: protein_coding
description:
  Short-chain dehydrogenase; Various substrate specificities; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: RUTHE_03084
symbol: parC
gene_biotype: protein_coding
description:
  DNA topoisomerase IV subunit A; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase GyrA/ParC subunit family. ParC type 1 subfamily.


ensembl_gene_id: RUTHE_03125
symbol: EPX82900.1
gene_biotype: protein_coding
description:
  2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway); Overlaps another CDS with the same product name.


ensembl_gene_id: RUTHE_03138
symbol: EPX82680.1
gene_biotype: protein_coding
description:
  Pyridoxal phosphate enzyme, YggS family; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.


ensembl_gene_id: RUTHE_03143
symbol: EPX82685.1
gene_biotype: protein_coding
description:
  Folylpolyglutamate synthase/dihydrofolate synthase; Belongs to the folylpolyglutamate synthase family.


ensembl_gene_id: RUTHE_03147
symbol: EPX82689.1
gene_biotype: protein_coding
description:
  Amino acid/amide ABC transporter membrane protein 2; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: RUTHE_03148
symbol: EPX82690.1
gene_biotype: protein_coding
description:
  Amino acid/amide ABC transporter membrane protein 1; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: RUTHE_03154
symbol: EPX82696.1
gene_biotype: protein_coding
description:
  uroporphyrinogen-III C-methyltransferase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme. Belongs to the precorrin methyltransferase family.  In the N-terminal section; belongs to the precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase family.


ensembl_gene_id: RUTHE_03157
symbol: EPX82699.1
gene_biotype: protein_coding
description:
  Phosphoadenylylsulfate reductase (thioredoxin); Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.


ensembl_gene_id: RUTHE_03161
symbol: infC
gene_biotype: protein_coding
description:
  Bacterial translation initiation factor 3 (bIF-3); IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.


ensembl_gene_id: RUTHE_03164
symbol: tgt
gene_biotype: protein_coding
description:
  tRNA-guanine transglycosylase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the [...]


ensembl_gene_id: RUTHE_03166
symbol: lon
gene_biotype: protein_coding
description:
  ATP-dependent proteinase, Serine peptidase; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.


ensembl_gene_id: RUTHE_03173
symbol: ndk
gene_biotype: protein_coding
description:
  Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.


ensembl_gene_id: RUTHE_03176
symbol: EPX82715.1
gene_biotype: protein_coding
description:
  Spermidine/putrescine-binding periplasmic protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.


ensembl_gene_id: RUTHE_03179
symbol: fbpC
gene_biotype: protein_coding
description:
  ABC-type spermidine/putrescine transport system, ATPase component; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system.


ensembl_gene_id: RUTHE_03184
symbol: EPX82723.1
gene_biotype: protein_coding
description:
  dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.


ensembl_gene_id: RUTHE_03185
symbol: EPX82724.1
gene_biotype: protein_coding
description:
  dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family.


ensembl_gene_id: RUTHE_03202
symbol: queA
gene_biotype: protein_coding
description:
  S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).


ensembl_gene_id: RUTHE_03204
symbol: EPX82743.1
gene_biotype: protein_coding
description:
  Pyruvate/2-oxoglutarate dehydrogenase complex; Dihydrolipoamide dehydrogenase (E3) component/related enzyme.


ensembl_gene_id: RUTHE_03206
symbol: uvrA
gene_biotype: protein_coding
description:
  Excinuclease ABC, A subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.


ensembl_gene_id: RUTHE_03209
symbol: EPX82747.1
gene_biotype: protein_coding
description:
  Ribonucleoside-diphosphate reductase class II; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen.


ensembl_gene_id: RUTHE_03230
symbol: aspS
gene_biotype: protein_coding
description:
  aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.


ensembl_gene_id: RUTHE_03238
symbol: pyrG
gene_biotype: protein_coding
description:
  CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.


ensembl_gene_id: RUTHE_03239
symbol: EPX82777.1
gene_biotype: protein_coding
description:
  Protein translocase subunit secG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.


ensembl_gene_id: RUTHE_03240
symbol: purA
gene_biotype: protein_coding
description:
  Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.


ensembl_gene_id: RUTHE_03252
symbol: EPX82790.1
gene_biotype: protein_coding
description:
  His Kinase A (phospho-acceptor) domain/PAS fold/Response regulator receiver domain/Histidine kinase; DNA gyrase B-, and HSP90-like ATPase.


ensembl_gene_id: RUTHE_03261
symbol: mutL
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.


ensembl_gene_id: RUTHE_03263
symbol: EPX82525.1
gene_biotype: protein_coding
description:
  Putative Zn-dependent peptidase; Overlaps another CDS with the same product name; Belongs to the peptidase M16 family.


ensembl_gene_id: RUTHE_03265
symbol: lspA
gene_biotype: protein_coding
description:
  Lipoprotein signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.


ensembl_gene_id: RUTHE_03267
symbol: EPX82529.1
gene_biotype: protein_coding
description:
  IMP cyclohydrolase/phosphoribosylaminoimidazolecarboxamide formyltransferase; Belongs to the PurH family.


ensembl_gene_id: RUTHE_03269
symbol: EPX82531.1
gene_biotype: protein_coding
description:
  NusB family/NOL1/NOP2/sun family; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.


ensembl_gene_id: RUTHE_03271
symbol: dapB
gene_biotype: protein_coding
description:
  Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.


ensembl_gene_id: RUTHE_03272
symbol: rbfA
gene_biotype: protein_coding
description:
  Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.


ensembl_gene_id: RUTHE_03274
symbol: truB
gene_biotype: protein_coding
description:
  tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.


ensembl_gene_id: RUTHE_03275
symbol: EPX82537.1
gene_biotype: protein_coding
description:
  Molybdopterin-guanine dinucleotide biosynthesis protein A; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor; Belongs to the MobA family.


ensembl_gene_id: RUTHE_03281
symbol: pdxH
gene_biotype: protein_coding
description:
  Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP).


ensembl_gene_id: RUTHE_03285
symbol: gpt
gene_biotype: protein_coding
description:
  Putative phosphoribosyltransferase; Acts on guanine, xanthine and to a lesser extent hypoxanthine; Belongs to the purine/pyrimidine phosphoribosyltransferase family. XGPT subfamily.


ensembl_gene_id: RUTHE_03288
symbol: EPX82550.1
gene_biotype: protein_coding
description:
  Anthranilate/para-aminobenzoate synthase component I; Overlaps another CDS with the same product name.


ensembl_gene_id: RUTHE_03290
symbol: dusA
gene_biotype: protein_coding
description:
  tRNA-U16,U17-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs; Belongs to the Dus family. DusA subfamily.


ensembl_gene_id: RUTHE_03305
symbol: EPX82376.1
gene_biotype: protein_coding
description:
  Membrane protein; Related to metalloendopeptidase involved in the export of O-antigen and teichoic acid.


ensembl_gene_id: RUTHE_03314
symbol: EPX82385.1
gene_biotype: protein_coding
description:
  Glucose-1-phosphate thymidylyltransferase, short form; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.


ensembl_gene_id: RUTHE_03315
symbol: EPX82386.1
gene_biotype: protein_coding
description:
  dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.


ensembl_gene_id: RUTHE_03316
symbol: aroC
gene_biotype: protein_coding
description:
  Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.


ensembl_gene_id: RUTHE_03319
symbol: amn
gene_biotype: protein_coding
description:
  AMP nucleosidase; Catalyzes the hydrolysis of the N-glycosidic bond of AMP to form adenine and ribose 5-phosphate. Involved in regulation of AMP concentrations.


ensembl_gene_id: RUTHE_03327
symbol: dinB
gene_biotype: protein_coding
description:
  Nucleotidyltransferase/DNA polymerase involved in DNA repair; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.


ensembl_gene_id: RUTHE_03331
symbol: pyrF
gene_biotype: protein_coding
description:
  Orotidine-5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily.


ensembl_gene_id: RUTHE_03335
symbol: msrP
gene_biotype: protein_coding
description:
  Sulfite oxidase/related enzyme; Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R [...]


ensembl_gene_id: RUTHE_03336
symbol: msrQ
gene_biotype: protein_coding
description:
  Putative membrane protein; Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, usin [...]


ensembl_gene_id: RUTHE_03340
symbol: lpxK
gene_biotype: protein_coding
description:
  lipid-A-disaccharide kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).


# pathwayInfo

id: CL:101
description: Structural constituent of ribosome, and Regulation of translation
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:101_Structural_constituent_of_ribosome,_and_Regulation_of_translation


id: CL:1034
description: Heme transport, and Signal-anchor
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1034_Heme_transport,_and_Signal-anchor


id: CL:104
description: Structural constituent of ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:104_Structural_constituent_of_ribosome,_and_Translation_regulator_activity


id: CL:1058
description: Mixed, incl. Carbon metabolism, and Valine, leucine and isoleucine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1058_Mixed,_incl._Carbon_metabolism,_and_Valine,_leucine_and_isoleucine_biosynthesis


id: CL:1059
description: Mixed, incl. Citrate cycle (TCA cycle), and Valine, leucine and isoleucine degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1059_Mixed,_incl._Citrate_cycle_(TCA_cycle),_and_Valine,_leucine_and_isoleucine_degradation


id: CL:1060
description: Mixed, incl. Citrate cycle (TCA cycle), and Valine, leucine and isoleucine degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1060_Mixed,_incl._Citrate_cycle_(TCA_cycle),_and_Valine,_leucine_and_isoleucine_degradation


id: CL:1061
description: Citrate cycle (TCA cycle), and Valine, leucine and isoleucine degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1061_Citrate_cycle_(TCA_cycle),_and_Valine,_leucine_and_isoleucine_degradation


id: CL:1062
description: Citrate cycle (TCA cycle), and CoA carboxylase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1062_Citrate_cycle_(TCA_cycle),_and_CoA_carboxylase_activity


id: CL:1063
description: Citrate cycle (TCA cycle), and Pyruvate, phosphate dikinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1063_Citrate_cycle_(TCA_cycle),_and_Pyruvate,_phosphate_dikinase_activity


id: CL:1067
description: Succinate dehydrogenase activity, and CoA-ligase
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1067_Succinate_dehydrogenase_activity,_and_CoA-ligase


id: CL:108
description: Structural constituent of ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:108_Structural_constituent_of_ribosome,_and_Translation_regulator_activity


id: CL:1092
description: Pyruvate dehydrogenase activity, and Dihydrolipoyl dehydrogenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1092_Pyruvate_dehydrogenase_activity,_and_Dihydrolipoyl_dehydrogenase_activity


id: CL:1107
description: Mixed, incl. Pyruvate, phosphate dikinase activity, and 3Fe-4S
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1107_Mixed,_incl._Pyruvate,_phosphate_dikinase_activity,_and_3Fe-4S


id: CL:1119
description: CoA carboxylase activity, and Pyruvate carboxylase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1119_CoA_carboxylase_activity,_and_Pyruvate_carboxylase_activity


id: CL:112
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:112_Structural_constituent_of_ribosome


id: CL:1121
description: Pyruvate carboxylase activity, and propionyl-CoA carboxylase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1121_Pyruvate_carboxylase_activity,_and_propionyl-CoA_carboxylase_activity


id: CL:113
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:113_Structural_constituent_of_ribosome


id: CL:114
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:114_Structural_constituent_of_ribosome


id: CL:1147
description: Aldehyde dehydrogenase domain, and AMP binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1147_Aldehyde_dehydrogenase_domain,_and_AMP_binding


id: CL:1151
description: beta-Alanine metabolism, and Regulation of secretion
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1151_beta-Alanine_metabolism,_and_Regulation_of_secretion


id: CL:116
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:116_Structural_constituent_of_ribosome


id: CL:1168
description: Mixed, incl. Acyl-CoA dehydrogenase-like, C-terminal, and NAD+ binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1168_Mixed,_incl._Acyl-CoA_dehydrogenase-like,_C-terminal,_and_NAD+_binding


id: CL:1169
description: Mixed, incl. NAD+ binding, and Thiolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1169_Mixed,_incl._NAD+_binding,_and_Thiolase


id: CL:1171
description: NAD+ binding, and Thiolase, active site
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1171_NAD+_binding,_and_Thiolase,_active_site


id: CL:118
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:118_Structural_constituent_of_ribosome


id: CL:1193
description: Organelle inner membrane, and Electron transfer flavoprotein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1193_Organelle_inner_membrane,_and_Electron_transfer_flavoprotein_domain


id: CL:120
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:120_Structural_constituent_of_ribosome


id: CL:1207
description: Valine, leucine and isoleucine biosynthesis, and Dihydroxy-acid dehydratase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1207_Valine,_leucine_and_isoleucine_biosynthesis,_and_Dihydroxy-acid_dehydratase_activity


id: CL:1209
description: Valine, leucine and isoleucine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1209_Valine,_leucine_and_isoleucine_biosynthesis


id: CL:1211
description: Valine metabolic process, and Taurine catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1211_Valine_metabolic_process,_and_Taurine_catabolic_process


id: CL:1213
description: Valine metabolic process, and Taurine catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1213_Valine_metabolic_process,_and_Taurine_catabolic_process


id: CL:1254
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1254_Mixed,_incl._Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors,_and_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors

description:
  Mixed, incl. Oxidoreductase activity, acting on the CH-NH group of donors, and Oxidoreductase activity, acting on the CH-NH2 group of donors


id: CL:1255
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1255_Mixed,_incl._Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors,_and_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors

description:
  Mixed, incl. Oxidoreductase activity, acting on the CH-NH group of donors, and Oxidoreductase activity, acting on the CH-NH2 group of donors


id: CL:1256
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1256_Mixed,_incl._GTP-binding_protein_TrmE/Aminomethyltransferase_GcvT,_domain_1,_and_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors

description:
  Mixed, incl. GTP-binding protein TrmE/Aminomethyltransferase GcvT, domain 1, and Oxidoreductase activity, acting on the CH-NH2 group of donors


id: CL:1258
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1258_Mixed,_incl._Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors,_and_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors

description:
  Mixed, incl. Oxidoreductase activity, acting on the CH-NH group of donors, and Oxidoreductase activity, acting on the CH-NH2 group of donors


id: CL:1261
description: Oxidoreductase activity, acting on the CH-NH group of donors, and Glycine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1261_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors,_and_Glycine_metabolic_process


id: CL:1264
description: Oxidoreductase activity, acting on the CH-NH group of donors
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1264_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors


id: CL:1266
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1266_Sarcosine_oxidase_activity,_and_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors,_flavin_as_acceptor

description:
  Sarcosine oxidase activity, and Oxidoreductase activity, acting on the CH-NH group of donors, flavin as acceptor


id: CL:1279
description: Sarcosine oxidase activity, and FAD dependent oxidoreductase central domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1279_Sarcosine_oxidase_activity,_and_FAD_dependent_oxidoreductase_central_domain


id: CL:1293
description: Glycine metabolic process, and One-carbon metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1293_Glycine_metabolic_process,_and_One-carbon_metabolism


id: CL:1310
description: Glutamate biosynthetic process, and Glutamine amidotransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1310_Glutamate_biosynthetic_process,_and_Glutamine_amidotransferase_domain


id: CL:1334
description: Lignin catabolic process, and Response to starvation
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1334_Lignin_catabolic_process,_and_Response_to_starvation


id: CL:1353
description: Fatty acid beta-oxidation, unsaturated, even number, and YjgF/YER057c/UK114 family
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1353_Fatty_acid_beta-oxidation,_unsaturated,_even_number,_and_YjgF/YER057c/UK114_family


id: CL:1363
description: Mixed, incl. Short-chain dehydrogenase/reductase SDR, and Fatty acid biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1363_Mixed,_incl._Short-chain_dehydrogenase/reductase_SDR,_and_Fatty_acid_biosynthetic_process


id: CL:1364
description: Mixed, incl. Short-chain dehydrogenase/reductase SDR, and Fatty acid biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1364_Mixed,_incl._Short-chain_dehydrogenase/reductase_SDR,_and_Fatty_acid_biosynthetic_process


id: CL:1365
description: Mixed, incl. Short-chain dehydrogenase/reductase SDR, and Fatty acid biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1365_Mixed,_incl._Short-chain_dehydrogenase/reductase_SDR,_and_Fatty_acid_biosynthetic_process


id: CL:1366
description: Short-chain dehydrogenase/reductase SDR, and Fatty acid biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1366_Short-chain_dehydrogenase/reductase_SDR,_and_Fatty_acid_biosynthetic_process


id: CL:1368
description: Mixed, incl. Fatty acid synthase activity, and Short-chain dehydrogenase/reductase SDR
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1368_Mixed,_incl._Fatty_acid_synthase_activity,_and_Short-chain_dehydrogenase/reductase_SDR


id: CL:1370
description: Fatty acid synthase activity, and Acyl carrier activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1370_Fatty_acid_synthase_activity,_and_Acyl_carrier_activity


id: CL:1408
description: Mixed, incl. Biosynthesis of siderophore group nonribosomal peptides, and Cytochrome P450
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1408_Mixed,_incl._Biosynthesis_of_siderophore_group_nonribosomal_peptides,_and_Cytochrome_P450


id: CL:1413
description: Biosynthesis of siderophore group nonribosomal peptides, and ACP-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1413_Biosynthesis_of_siderophore_group_nonribosomal_peptides,_and_ACP-like_superfamily


id: CL:142
description: Large ribosomal subunit, and KOW (Kyprides, Ouzounis, Woese) motif.
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:142_Large_ribosomal_subunit,_and_KOW_(Kyprides,_Ouzounis,_Woese)_motif.


id: CL:1439
description: 5-aminolevulinate synthase activity, and Biotin metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1439_5-aminolevulinate_synthase_activity,_and_Biotin_metabolic_process


id: CL:1448
description: Mixed, incl. SLC26A/SulP transporter, and STAS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1448_Mixed,_incl._SLC26A/SulP_transporter,_and_STAS_domain


id: CL:1463
description: Aldo-keto reductase, and Phenol-containing compound catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1463_Aldo-keto_reductase,_and_Phenol-containing_compound_catabolic_process


id: CL:1476
description: Mixed, incl. Proline racemase, and Dihydrodipicolinate synthetase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1476_Mixed,_incl._Proline_racemase,_and_Dihydrodipicolinate_synthetase_family


id: CL:1491
description: Mixed, incl. Amino-acid betaine metabolic process, and Sphingolipid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1491_Mixed,_incl._Amino-acid_betaine_metabolic_process,_and_Sphingolipid_metabolism


id: CL:1493
description: Sphingolipid metabolism, and Oxidation
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1493_Sphingolipid_metabolism,_and_Oxidation


id: CL:1507
description: Mixed, incl. Carnitine metabolic process, and Alpha/beta hydrolase fold
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1507_Mixed,_incl._Carnitine_metabolic_process,_and_Alpha/beta_hydrolase_fold


id: CL:1518
description: Mixed, incl. Glyoxylate and dicarboxylate metabolism, and Fumarylacetoacetase-like, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1518_Mixed,_incl._Glyoxylate_and_dicarboxylate_metabolism,_and_Fumarylacetoacetase-like,_C-terminal


id: CL:1520
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1520_Mixed,_incl._D-isomer_specific_2-hydroxyacid_dehydrogenase,_NAD-binding_domain,_and_HAD_hydrolase,_subfamily_IA

description:
  Mixed, incl. D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain, and HAD hydrolase, subfamily IA


id: CL:1522
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1522_Mixed,_incl._D-isomer_specific_2-hydroxyacid_dehydrogenase,_NAD-binding_domain,_and_Lactate_metabolic_process

description:
  Mixed, incl. D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain, and Lactate metabolic process


id: CL:1525
description: Lactate metabolic process, and Oxidation
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1525_Lactate_metabolic_process,_and_Oxidation


id: CL:156
description: Small ribosomal subunit, and Elongation factor Tu GTP binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:156_Small_ribosomal_subunit,_and_Elongation_factor_Tu_GTP_binding_domain


id: CL:1569
description: Mostly uncharacterized, incl. UROD/MetE-like superfamily, and Naphthalene degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1569_Mostly_uncharacterized,_incl._UROD/MetE-like_superfamily,_and_Naphthalene_degradation


id: CL:1571
description: Mixed, incl. Alpha/beta hydrolase fold, and Aldehyde dehydrogenase, cysteine active site
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1571_Mixed,_incl._Alpha/beta_hydrolase_fold,_and_Aldehyde_dehydrogenase,_cysteine_active_site


id: CL:1590
description: Cellular amino acid biosynthetic process, and Arginine and proline metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1590_Cellular_amino_acid_biosynthetic_process,_and_Arginine_and_proline_metabolism


id: CL:1591
description: Cellular amino acid biosynthetic process, and Aminotransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1591_Cellular_amino_acid_biosynthetic_process,_and_Aminotransferase


id: CL:1592
description: Cellular amino acid biosynthetic process, and Aminotransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1592_Cellular_amino_acid_biosynthetic_process,_and_Aminotransferase


id: CL:1593
description: Cellular amino acid biosynthetic process, and Aminotransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1593_Cellular_amino_acid_biosynthetic_process,_and_Aminotransferase


id: CL:1594
description: Alpha-amino acid biosynthetic process, and Aminotransferase, class I/classII
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1594_Alpha-amino_acid_biosynthetic_process,_and_Aminotransferase,_class_I/classII


id: CL:1595
description: Mixed, incl. Arginine biosynthetic process, and Lysine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1595_Mixed,_incl._Arginine_biosynthetic_process,_and_Lysine_biosynthesis


id: CL:1597
description: Arginine biosynthetic process, and Lysine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1597_Arginine_biosynthetic_process,_and_Lysine_biosynthesis


id: CL:1600
description: Ornithine metabolic process, and Arginine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1600_Ornithine_metabolic_process,_and_Arginine_biosynthesis


id: CL:1636
description: Cytosol aminopeptidase family, catalytic domain, and Aminotransferase class I and II
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1636_Cytosol_aminopeptidase_family,_catalytic_domain,_and_Aminotransferase_class_I_and_II


id: CL:1650
description: L-serine metabolic process, and Serine/threonine dehydratase, pyridoxal-phosphate-binding site
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1650_L-serine_metabolic_process,_and_Serine/threonine_dehydratase,_pyridoxal-phosphate-binding_site


id: CL:1652
description: Serine/threonine dehydratase, pyridoxal-phosphate-binding site, and Ammonia-lyase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1652_Serine/threonine_dehydratase,_pyridoxal-phosphate-binding_site,_and_Ammonia-lyase_activity


id: CL:1673
description: Aromatic amino acid family biosynthetic process, and Histidine biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1673_Aromatic_amino_acid_family_biosynthetic_process,_and_Histidine_biosynthetic_process


id: CL:1674
description: Aromatic amino acid family biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1674_Aromatic_amino_acid_family_biosynthetic_process


id: CL:1676
description: Tryptophan biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1676_Tryptophan_biosynthetic_process


id: CL:1693
description: Chorismate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1693_Chorismate_biosynthetic_process


id: CL:1731
description: Mixed, incl. Novobiocin biosynthesis, and Thioredoxin-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1731_Mixed,_incl._Novobiocin_biosynthesis,_and_Thioredoxin-like_superfamily


id: CL:1746
description: Mixed, incl. Methionine metabolic process, and One-carbon metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1746_Mixed,_incl._Methionine_metabolic_process,_and_One-carbon_metabolism


id: CL:1747
description: Methionine metabolic process, and One-carbon metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1747_Methionine_metabolic_process,_and_One-carbon_metabolism


id: CL:1749
description: Cobalamin binding, and FAD-linked oxidoreductase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1749_Cobalamin_binding,_and_FAD-linked_oxidoreductase-like


id: CL:1772
description: Methanogenesis, and Beta-grasp domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1772_Methanogenesis,_and_Beta-grasp_domain_superfamily


id: CL:1782
description: Mixed, incl. Histidine catabolic process, and Ureohydrolase domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1782_Mixed,_incl._Histidine_catabolic_process,_and_Ureohydrolase_domain_superfamily


id: CL:1783
description: Mixed, incl. Ureohydrolase domain superfamily, and Polyamine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1783_Mixed,_incl._Ureohydrolase_domain_superfamily,_and_Polyamine_metabolic_process


id: CL:1784
description: Ureohydrolase domain superfamily, and Polyamine biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1784_Ureohydrolase_domain_superfamily,_and_Polyamine_biosynthetic_process


id: CL:1787
description: Ornithine cyclodeaminase, N-terminal, and Ureohydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1787_Ornithine_cyclodeaminase,_N-terminal,_and_Ureohydrolase


id: CL:1805
description: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase activity, and Amidohydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1805_2,3,4,5-tetrahydropyridine-2,6-dicarboxylate_N-succinyltransferase_activity,_and_Amidohydrolase


id: CL:1815
description: Formamide metabolic process, and Guanine catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1815_Formamide_metabolic_process,_and_Guanine_catabolic_process


id: CL:1828
description: Mixed, incl. Pentose phosphate pathway, and Amino sugar and nucleotide sugar metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1828_Mixed,_incl._Pentose_phosphate_pathway,_and_Amino_sugar_and_nucleotide_sugar_metabolism


id: CL:1829
description: Mixed, incl. Pentose phosphate pathway, and Glycolytic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1829_Mixed,_incl._Pentose_phosphate_pathway,_and_Glycolytic_process


id: CL:1830
description: Pentose phosphate pathway, and Glycolytic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1830_Pentose_phosphate_pathway,_and_Glycolytic_process


id: CL:1831
description: Pentose phosphate pathway, and Glycolytic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1831_Pentose_phosphate_pathway,_and_Glycolytic_process


id: CL:1832
description: Pentose phosphate pathway, and Glycolytic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1832_Pentose_phosphate_pathway,_and_Glycolytic_process


id: CL:1834
description: Pentose phosphate pathway, and Glycolysis
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1834_Pentose_phosphate_pathway,_and_Glycolysis


id: CL:1835
description: Transketolase or transaldolase activity, and Glycolysis
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1835_Transketolase_or_transaldolase_activity,_and_Glycolysis


id: CL:1836
description: Glycolysis, and Sugar-phosphatase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1836_Glycolysis,_and_Sugar-phosphatase_activity


id: CL:1838
description: Carbon fixation, and Pentose shunt
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1838_Carbon_fixation,_and_Pentose_shunt


id: CL:1850
description: Glycolysis, and Phosphotransferase activity, carboxyl group as acceptor
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1850_Glycolysis,_and_Phosphotransferase_activity,_carboxyl_group_as_acceptor


id: CL:186
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:186_Structural_constituent_of_ribosome


id: CL:1875
description: Glucose 6-phosphate metabolic process, and SIS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1875_Glucose_6-phosphate_metabolic_process,_and_SIS_domain


id: CL:1901
description: Mixed, incl. Galactonate metabolic process, and Gluconolactonase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1901_Mixed,_incl._Galactonate_metabolic_process,_and_Gluconolactonase_activity


id: CL:1914
description: Peptidase family S41, and Hexose catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1914_Peptidase_family_S41,_and_Hexose_catabolic_process


id: CL:1927
description: Mixed, incl. Phosphoglucosamine mutase activity, and Carbohydrate kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1927_Mixed,_incl._Phosphoglucosamine_mutase_activity,_and_Carbohydrate_kinase_activity


id: CL:1931
description: GlmS/FrlB, SIS domain 2, and ATPase, BadF/BadG/BcrA/BcrD type
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1931_GlmS/FrlB,_SIS_domain_2,_and_ATPase,_BadF/BadG/BcrA/BcrD_type


id: CL:1945
description: Mixed, incl. Phosphoglucosamine mutase activity, and Isochorismatase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1945_Mixed,_incl._Phosphoglucosamine_mutase_activity,_and_Isochorismatase-like


id: CL:1978
description: Mixed, incl. Nicotinate and nicotinamide metabolism, and Coenzyme A metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1978_Mixed,_incl._Nicotinate_and_nicotinamide_metabolism,_and_Coenzyme_A_metabolic_process


id: CL:1980
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1980_Mixed,_incl._Pyridine_nucleotide_biosynthetic_process,_and_Alanine_dehydrogenase/PNT,_N-terminal_domain

description:
  Mixed, incl. Pyridine nucleotide biosynthetic process, and Alanine dehydrogenase/PNT, N-terminal domain


id: CL:1982
description: Pyridine nucleotide biosynthetic process, and Alanine dehydrogenase/PNT, N-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1982_Pyridine_nucleotide_biosynthetic_process,_and_Alanine_dehydrogenase/PNT,_N-terminal_domain


id: CL:1984
description: Nicotinamide nucleotide biosynthetic process, and Export across plasma membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:1984_Nicotinamide_nucleotide_biosynthetic_process,_and_Export_across_plasma_membrane


id: CL:199
description: Mixed, incl. Small ribosomal subunit, and Ribosomal protein S13-like, H2TH
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:199_Mixed,_incl._Small_ribosomal_subunit,_and_Ribosomal_protein_S13-like,_H2TH


id: CL:2008
description: Mixed, incl. NAD biosynthetic process, and Zinc finger, DksA/TraR C4-type
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2008_Mixed,_incl._NAD_biosynthetic_process,_and_Zinc_finger,_DksA/TraR_C4-type


id: CL:2028
description: Mixed, incl. Coenzyme A metabolic process, and Pantothenate biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2028_Mixed,_incl._Coenzyme_A_metabolic_process,_and_Pantothenate_biosynthesis


id: CL:2030
description: Coenzyme A biosynthesis, and Maf-like protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2030_Coenzyme_A_biosynthesis,_and_Maf-like_protein


id: CL:2047
description: Pantothenate biosynthesis, and Pantothenate kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2047_Pantothenate_biosynthesis,_and_Pantothenate_kinase_activity


id: CL:2059
description: Mixed, incl. Glycerolipid metabolism, and Chromosome segregation
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2059_Mixed,_incl._Glycerolipid_metabolism,_and_Chromosome_segregation


id: CL:2060
description: Mixed, incl. Glycerolipid metabolism, and Chromosome segregation
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2060_Mixed,_incl._Glycerolipid_metabolism,_and_Chromosome_segregation


id: CL:2061
description: Mixed, incl. Chromosome segregation, and Chromatin remodeling
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2061_Mixed,_incl._Chromosome_segregation,_and_Chromatin_remodeling


id: CL:2063
description: Mixed, incl. Histidine kinase, and UDP-glucose metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2063_Mixed,_incl._Histidine_kinase,_and_UDP-glucose_metabolic_process


id: CL:2084
description: Sister chromatid cohesion, and Chromosome partition
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2084_Sister_chromatid_cohesion,_and_Chromosome_partition


id: CL:2098
description: Alditol phosphate metabolic process, and Glycerolipid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2098_Alditol_phosphate_metabolic_process,_and_Glycerolipid_metabolism


id: CL:2100
description: Alditol phosphate metabolic process, and CDP-diacylglycerol metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2100_Alditol_phosphate_metabolic_process,_and_CDP-diacylglycerol_metabolic_process


id: CL:2101
description: Alditol phosphate metabolic process, and CDP-diacylglycerol metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2101_Alditol_phosphate_metabolic_process,_and_CDP-diacylglycerol_metabolic_process


id: CL:2112
description: Alditol phosphate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2112_Alditol_phosphate_metabolic_process


id: CL:2133
description: Serine-type endopeptidase activity, and Peptidase M1, alanyl aminopeptidase
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2133_Serine-type_endopeptidase_activity,_and_Peptidase_M1,_alanyl_aminopeptidase


id: CL:2135
description: Mixed, incl. Trypsin-like peptidase domain, and Transglycosylase SLT domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2135_Mixed,_incl._Trypsin-like_peptidase_domain,_and_Transglycosylase_SLT_domain


id: CL:2155
description: Mixed, incl. Pyridoxine metabolic process, and DegT/DnrJ/EryC1/StrS aminotransferase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2155_Mixed,_incl._Pyridoxine_metabolic_process,_and_DegT/DnrJ/EryC1/StrS_aminotransferase_family


id: CL:216
description: RNA polymerase, and Transcription antitermination
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:216_RNA_polymerase,_and_Transcription_antitermination


id: CL:2171
description: Thiamine biosynthetic process, and Ubiquitin-activating enzyme
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2171_Thiamine_biosynthetic_process,_and_Ubiquitin-activating_enzyme


id: CL:2191
description: Ubiquitin-activating enzyme, and Peptidase M3A/M3B
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2191_Ubiquitin-activating_enzyme,_and_Peptidase_M3A/M3B


id: CL:2200
description: Mixed, incl. Electron transport chain, and Oxidative phosphorylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2200_Mixed,_incl._Electron_transport_chain,_and_Oxidative_phosphorylation


id: CL:2201
description: Mixed, incl. Oxidative phosphorylation, and Electron transport chain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2201_Mixed,_incl._Oxidative_phosphorylation,_and_Electron_transport_chain


id: CL:2202
description: Oxidative phosphorylation, and Oxidoreductase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2202_Oxidative_phosphorylation,_and_Oxidoreductase_complex


id: CL:2203
description: Oxidative phosphorylation, and Oxidoreductase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2203_Oxidative_phosphorylation,_and_Oxidoreductase_complex


id: CL:2204
description: Oxidoreduction-driven active transmembrane transporter activity, and Oxidative phosphorylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2204_Oxidoreduction-driven_active_transmembrane_transporter_activity,_and_Oxidative_phosphorylation


id: CL:2205
description: Oxidative phosphorylation, and Cytochrome c, class IA/ IB
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2205_Oxidative_phosphorylation,_and_Cytochrome_c,_class_IA/_IB


id: CL:2207
description: Oxidoreduction-driven active transmembrane transporter activity, and Peptidase M16, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2207_Oxidoreduction-driven_active_transmembrane_transporter_activity,_and_Peptidase_M16,_C-terminal


id: CL:2208
description: Mixed, incl. Cytochrome-c oxidase activity, and Peptidase M16, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2208_Mixed,_incl._Cytochrome-c_oxidase_activity,_and_Peptidase_M16,_C-terminal


id: CL:2209
description: Cytochrome-c oxidase activity, and UbiA prenyltransferase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2209_Cytochrome-c_oxidase_activity,_and_UbiA_prenyltransferase_family


id: CL:2219
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2219_Oxidoreductase_activity,_acting_on_diphenols_and_related_substances_as_donors,_and_NADH:ubiquinone_oxidoreductase

description:
  Oxidoreductase activity, acting on diphenols and related substances as donors, and NADH:ubiquinone oxidoreductase


id: CL:2228
description: Peptidase M16, C-terminal, and Cytochrome c, class IA/ IB
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2228_Peptidase_M16,_C-terminal,_and_Cytochrome_c,_class_IA/_IB


id: CL:2278
description: Formate dehydrogenase (NAD+) activity, and NADH dehydrogenase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2278_Formate_dehydrogenase_(NAD+)_activity,_and_NADH_dehydrogenase_complex


id: CL:2281
description: NADH dehydrogenase complex, and Molybdopterin oxidoreductase
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2281_NADH_dehydrogenase_complex,_and_Molybdopterin_oxidoreductase


id: CL:2300
description: Antiporter activity, and Na+/H+ antiporter subunit E
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2300_Antiporter_activity,_and_Na+/H+_antiporter_subunit_E


id: CL:2301
description: Cation:cation antiporter activity, and Na+/H+ antiporter subunit E
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2301_Cation:cation_antiporter_activity,_and_Na+/H+_antiporter_subunit_E


id: CL:2322
description: Tryptophan metabolism, and Lrp/AsnC ligand binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2322_Tryptophan_metabolism,_and_Lrp/AsnC_ligand_binding_domain


id: CL:2333
description: Mixed, incl. Heme, and Denitrification pathway
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2333_Mixed,_incl._Heme,_and_Denitrification_pathway


id: CL:2335
description: Mixed, incl. Cytochrome c-like domain, and UspA
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2335_Mixed,_incl._Cytochrome_c-like_domain,_and_UspA


id: CL:2339
description: Mixed, incl. Positive regulation of biosynthetic process, and Plasma membrane respirasome
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2339_Mixed,_incl._Positive_regulation_of_biosynthetic_process,_and_Plasma_membrane_respirasome


id: CL:2363
description: Mixed, incl. Denitrification pathway, and Ferritin-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2363_Mixed,_incl._Denitrification_pathway,_and_Ferritin-like_superfamily


id: CL:2366
description: Mixed, incl. Denitrification pathway, and Lactonase, 7-bladed beta-propeller
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2366_Mixed,_incl._Denitrification_pathway,_and_Lactonase,_7-bladed_beta-propeller


id: CL:2386
description: Mixed, incl. Sulfur metabolism, and Nucleotide catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2386_Mixed,_incl._Sulfur_metabolism,_and_Nucleotide_catabolic_process


id: CL:2388
description: Sulfur metabolism, and Metallo-beta-lactamase
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2388_Sulfur_metabolism,_and_Metallo-beta-lactamase


id: CL:2390
description: Mixed, incl. Sulfur metabolism, and Metallo-beta-lactamase
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2390_Mixed,_incl._Sulfur_metabolism,_and_Metallo-beta-lactamase


id: CL:2394
description: Mixed, incl. Sulfur oxidation, and Cytochrome c
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2394_Mixed,_incl._Sulfur_oxidation,_and_Cytochrome_c


id: CL:2398
description: Sulfur oxidation, and Cytochrome c, class IA/ IB
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2398_Sulfur_oxidation,_and_Cytochrome_c,_class_IA/_IB


id: CL:2425
description: ABC-type sulfate transporter activity, and Sulfate assimilation
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2425_ABC-type_sulfate_transporter_activity,_and_Sulfate_assimilation


id: CL:2451
description: Mixed, incl. Prolyl 4-hydroxylase, alpha subunit, and Type II protein secretion system complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2451_Mixed,_incl._Prolyl_4-hydroxylase,_alpha_subunit,_and_Type_II_protein_secretion_system_complex


id: CL:2475
description: Mixed, incl. Membrane, and Hint domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2475_Mixed,_incl._Membrane,_and_Hint_domain


id: CL:2476
description: Mixed, incl. Membrane, and Hint domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2476_Mixed,_incl._Membrane,_and_Hint_domain


id: CL:2477
description: Mostly uncharacterized, incl. Polysaccharide transport, and Proteolysis
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2477_Mostly_uncharacterized,_incl._Polysaccharide_transport,_and_Proteolysis


id: CL:2478
description: Mostly uncharacterized, incl. Polysaccharide transport, and Proteolysis
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2478_Mostly_uncharacterized,_incl._Polysaccharide_transport,_and_Proteolysis


id: CL:2479
description: Mostly uncharacterized, incl. Polysaccharide transport, and Hint domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2479_Mostly_uncharacterized,_incl._Polysaccharide_transport,_and_Hint_domain


id: CL:2480
description: Mixed, incl. Polysaccharide transport, and Hint domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2480_Mixed,_incl._Polysaccharide_transport,_and_Hint_domain


id: CL:2481
description: Mixed, incl. Polysaccharide transport, and Hint domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2481_Mixed,_incl._Polysaccharide_transport,_and_Hint_domain


id: CL:2483
description: Mixed, incl. Polysaccharide transport, and Hint domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2483_Mixed,_incl._Polysaccharide_transport,_and_Hint_domain


id: CL:2484
description: Mixed, incl. Polysaccharide transport, and Hint domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2484_Mixed,_incl._Polysaccharide_transport,_and_Hint_domain_superfamily


id: CL:2487
description: Mixed, incl. Hint domain superfamily, and Pectin lyase fold
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2487_Mixed,_incl._Hint_domain_superfamily,_and_Pectin_lyase_fold


id: CL:2489
description: Mixed, incl. Glycosyl transferase family 2, and Cell wall
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2489_Mixed,_incl._Glycosyl_transferase_family_2,_and_Cell_wall


id: CL:2490
description: Mixed, incl. Glycosyl transferase family 2, and Cell wall
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2490_Mixed,_incl._Glycosyl_transferase_family_2,_and_Cell_wall


id: CL:2503
description: Mixed, incl. Glycosyltransferase activity, and Coiled coil
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2503_Mixed,_incl._Glycosyltransferase_activity,_and_Coiled_coil


id: CL:252
description: Proton-transporting ATP synthase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:252_Proton-transporting_ATP_synthase_complex


id: CL:2522
description: Polysaccharide transport, and ABC-2 transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2522_Polysaccharide_transport,_and_ABC-2_transporter


id: CL:2524
description: Capsule polysaccharide biosynthesis, and Pore complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2524_Capsule_polysaccharide_biosynthesis,_and_Pore_complex


id: CL:2538
description: Polysaccharide transport, and ABC-2 transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2538_Polysaccharide_transport,_and_ABC-2_transporter


id: CL:2547
description: Mixed, incl. Hint domain, and Protein transmembrane transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2547_Mixed,_incl._Hint_domain,_and_Protein_transmembrane_transport


id: CL:2549
description: Mixed, incl. PGBD superfamily, and Catalytic activity, acting on a protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2549_Mixed,_incl._PGBD_superfamily,_and_Catalytic_activity,_acting_on_a_protein


id: CL:2583
description: Mixed, incl. Antioxidant activity, and Endonuclease/exonuclease/phosphatase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2583_Mixed,_incl._Antioxidant_activity,_and_Endonuclease/exonuclease/phosphatase_superfamily


id: CL:2586
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2586_Mixed,_incl._Endonuclease/exonuclease/phosphatase_superfamily,_and_Phosphatidylcholine_synthase_activity

description:
  Mixed, incl. Endonuclease/exonuclease/phosphatase superfamily, and Phosphatidylcholine synthase activity


id: CL:2589
description: Sugar-phosphatase activity, and Proteolysis
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2589_Sugar-phosphatase_activity,_and_Proteolysis


id: CL:2621
description: Mixed, incl. Alkane catabolic process, and Helix-turn-helix XRE-family like proteins
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2621_Mixed,_incl._Alkane_catabolic_process,_and_Helix-turn-helix_XRE-family_like_proteins


id: CL:2630
description: Mixed, incl. Proteolysis, and glycyl-tRNA aminoacylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2630_Mixed,_incl._Proteolysis,_and_glycyl-tRNA_aminoacylation


id: CL:2632
description: Mostly uncharacterized, incl. glycyl-tRNA aminoacylation, and Metalloprotease
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2632_Mostly_uncharacterized,_incl._glycyl-tRNA_aminoacylation,_and_Metalloprotease


id: CL:2634
description: Mostly uncharacterized, incl. glycyl-tRNA aminoacylation, and Endopeptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2634_Mostly_uncharacterized,_incl._glycyl-tRNA_aminoacylation,_and_Endopeptidase_activity


id: CL:2636
description: Mostly uncharacterized, incl. glycyl-tRNA aminoacylation, and Endopeptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2636_Mostly_uncharacterized,_incl._glycyl-tRNA_aminoacylation,_and_Endopeptidase_activity


id: CL:2638
description: Mostly uncharacterized, incl. Endopeptidase activity, and Outer membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2638_Mostly_uncharacterized,_incl._Endopeptidase_activity,_and_Outer_membrane


id: CL:2641
description: Mostly uncharacterized, incl. Serine-type endopeptidase activity, and Invasion protein B
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2641_Mostly_uncharacterized,_incl._Serine-type_endopeptidase_activity,_and_Invasion_protein_B


id: CL:2644
description: Mostly uncharacterized, incl. Rhomboid family, and tRNA (m5U54) methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2644_Mostly_uncharacterized,_incl._Rhomboid_family,_and_tRNA_(m5U54)_methyltransferase_activity


id: CL:2649
description: Mixed, incl. Rhomboid family, and Lipopolysaccharide metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2649_Mixed,_incl._Rhomboid_family,_and_Lipopolysaccharide_metabolic_process


id: CL:2669
description: Mostly uncharacterized, incl. Invasion protein B, and Sporulation-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2669_Mostly_uncharacterized,_incl._Invasion_protein_B,_and_Sporulation-like_domain


id: CL:2671
description: Mixed, incl. Invasion protein B, and Outer membrane protein, bacterial
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2671_Mixed,_incl._Invasion_protein_B,_and_Outer_membrane_protein,_bacterial


id: CL:2683
description: Mixed, incl. Sporulation-like domain, and EF-Hand 1, calcium-binding site
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2683_Mixed,_incl._Sporulation-like_domain,_and_EF-Hand_1,_calcium-binding_site


id: CL:2726
description: Mixed, incl. DUF465 superfamily, and Peptidase family M50
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2726_Mixed,_incl._DUF465_superfamily,_and_Peptidase_family_M50


id: CL:2747
description: Mixed, incl. Copper chaperone PCuAC, and Copper chaperone SCO1/SenC
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2747_Mixed,_incl._Copper_chaperone_PCuAC,_and_Copper_chaperone_SCO1/SenC


id: CL:2760
description: Mixed, incl. Protein of unknown function DUF484, and Integrase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2760_Mixed,_incl._Protein_of_unknown_function_DUF484,_and_Integrase_activity


id: CL:2762
description: Mixed, incl. Protein of unknown function DUF484, and Integrase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2762_Mixed,_incl._Protein_of_unknown_function_DUF484,_and_Integrase_activity


id: CL:277
description: Aminoacyl-tRNA synthetase, class Ia, anticodon-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:277_Aminoacyl-tRNA_synthetase,_class_Ia,_anticodon-binding


id: CL:2785
description: Folic acid metabolic process, and GTP cyclohydrolase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2785_Folic_acid_metabolic_process,_and_GTP_cyclohydrolase_activity


id: CL:2802
description: Mixed, incl. Regulation of cell shape, and Cell cycle
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2802_Mixed,_incl._Regulation_of_cell_shape,_and_Cell_cycle


id: CL:2803
description: Mixed, incl. Regulation of cell shape, and Penicillin binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2803_Mixed,_incl._Regulation_of_cell_shape,_and_Penicillin_binding


id: CL:2804
description: Mixed, incl. Peptidoglycan biosynthesis, and Cytokinesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2804_Mixed,_incl._Peptidoglycan_biosynthesis,_and_Cytokinesis


id: CL:2806
description: Mixed, incl. Regulation of cell shape, and Penicillin binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2806_Mixed,_incl._Regulation_of_cell_shape,_and_Penicillin_binding


id: CL:2807
description: Mixed, incl. Regulation of cell shape, and Penicillin binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2807_Mixed,_incl._Regulation_of_cell_shape,_and_Penicillin_binding


id: CL:2808
description: Regulation of cell shape, and Cell division site
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2808_Regulation_of_cell_shape,_and_Cell_division_site


id: CL:2809
description: Cell division, and SpoVT-AbrB domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2809_Cell_division,_and_SpoVT-AbrB_domain


id: CL:2810
description: Cell cycle, and Vancomycin resistance
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2810_Cell_cycle,_and_Vancomycin_resistance


id: CL:2812
description: Cell shape, and Vancomycin resistance
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2812_Cell_shape,_and_Vancomycin_resistance


id: CL:2814
description: Vancomycin resistance, and Mur ligase, central
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2814_Vancomycin_resistance,_and_Mur_ligase,_central


id: CL:2841
description: Mixed, incl. SpoVT-AbrB domain, and Small multidrug resistance protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2841_Mixed,_incl._SpoVT-AbrB_domain,_and_Small_multidrug_resistance_protein


id: CL:2852
description: Penicillin binding, and Protein self-association
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2852_Penicillin_binding,_and_Protein_self-association


id: CL:2867
description: Mixed, incl. Transglycosylase, and Peptidoglycan muralytic activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2867_Mixed,_incl._Transglycosylase,_and_Peptidoglycan_muralytic_activity


id: CL:2869
description: Transglycosylase, and Lytic endotransglycosylase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2869_Transglycosylase,_and_Lytic_endotransglycosylase_activity


id: CL:2888
description: Mixed, incl. YebC-like, and TrkA-C domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2888_Mixed,_incl._YebC-like,_and_TrkA-C_domain


id: CL:2905
description: Mixed, incl. Carboxypeptidase, and Peptidoglycan binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2905_Mixed,_incl._Carboxypeptidase,_and_Peptidoglycan_binding


id: CL:2919
description: Mixed, incl. RNA 2-O-methyltransferase activity, and Polysaccharide biosynthesis protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2919_Mixed,_incl._RNA_2-O-methyltransferase_activity,_and_Polysaccharide_biosynthesis_protein


id: CL:2928
description: Mostly uncharacterized, incl. Maf-like protein, and tRNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2928_Mostly_uncharacterized,_incl._Maf-like_protein,_and_tRNA-binding_domain


id: CL:2930
description: Mixed, incl. Enolpyruvate transferase domain, and Blockage of phagosome acidification
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2930_Mixed,_incl._Enolpyruvate_transferase_domain,_and_Blockage_of_phagosome_acidification


id: CL:2943
description: Mixed, incl. Adenosine deaminase activity, and Lipoprotein metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2943_Mixed,_incl._Adenosine_deaminase_activity,_and_Lipoprotein_metabolic_process


id: CL:2953
description: Mixed, incl. Signal transduction, and Flagellar assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2953_Mixed,_incl._Signal_transduction,_and_Flagellar_assembly


id: CL:2954
description: Mixed, incl. Signal transduction, and Cilium
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2954_Mixed,_incl._Signal_transduction,_and_Cilium


id: CL:2957
description: Mixed, incl. Signal transduction, and Cilium
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2957_Mixed,_incl._Signal_transduction,_and_Cilium


id: CL:2959
description: Mixed, incl. Cilium, and Negative regulation of biological process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2959_Mixed,_incl._Cilium,_and_Negative_regulation_of_biological_process


id: CL:2960
description: Cilium, and Establishment of competence for transformation
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2960_Cilium,_and_Establishment_of_competence_for_transformation


id: CL:2966
description: Cilium, and Bacterial-type flagellum organization
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2966_Cilium,_and_Bacterial-type_flagellum_organization


id: CL:2968
description: Mixed, incl. Flagella basal body rod protein, and Chemotaxis
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2968_Mixed,_incl._Flagella_basal_body_rod_protein,_and_Chemotaxis


id: CL:2970
description: Bacterial-type flagellum basal body, rod, and AMP-binding enzyme, C-terminal domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2970_Bacterial-type_flagellum_basal_body,_rod,_and_AMP-binding_enzyme,_C-terminal_domain_superfamily


id: CL:2998
description: Bacterial-type flagellum basal body, and Bacterial flagellum biogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2998_Bacterial-type_flagellum_basal_body,_and_Bacterial_flagellum_biogenesis


id: CL:2999
description: Bacterial-type flagellum basal body, and Bacterial flagellum biogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:2999_Bacterial-type_flagellum_basal_body,_and_Bacterial_flagellum_biogenesis


id: CL:3000
description: Bacterial flagellum, and Bacterial flagellum biogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3000_Bacterial_flagellum,_and_Bacterial_flagellum_biogenesis


id: CL:3011
description: Bacterial-type flagellum assembly, and Bacterial flagellum protein export
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3011_Bacterial-type_flagellum_assembly,_and_Bacterial_flagellum_protein_export


id: CL:302
description: Translocation, and Protein carrier chaperone
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:302_Translocation,_and_Protein_carrier_chaperone


id: CL:3038
description: Mixed, incl. Establishment of competence for transformation, and Furfural degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3038_Mixed,_incl._Establishment_of_competence_for_transformation,_and_Furfural_degradation


id: CL:3050
description: Mixed, incl. Regulation of cell killing, and Regulation of cell division
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3050_Mixed,_incl._Regulation_of_cell_killing,_and_Regulation_of_cell_division


id: CL:3053
description: Mixed, incl. Type II secretion system (T2SS), protein F, and Regulation of cell division
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3053_Mixed,_incl._Type_II_secretion_system_(T2SS),_protein_F,_and_Regulation_of_cell_division


id: CL:3082
description: Signal transduction, and Putative diguanylate phosphodiesterase
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3082_Signal_transduction,_and_Putative_diguanylate_phosphodiesterase


id: CL:3084
description: Signal transduction, and Putative diguanylate phosphodiesterase
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3084_Signal_transduction,_and_Putative_diguanylate_phosphodiesterase


id: CL:3086
description: Signal transduction, and Putative diguanylate phosphodiesterase
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3086_Signal_transduction,_and_Putative_diguanylate_phosphodiesterase


id: CL:3088
description: Protein histidine kinase activity, and cheY-homologous receiver domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3088_Protein_histidine_kinase_activity,_and_cheY-homologous_receiver_domain


id: CL:3090
description: Putative diguanylate phosphodiesterase, and PAS domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3090_Putative_diguanylate_phosphodiesterase,_and_PAS_domain_superfamily


id: CL:3092
description: Putative diguanylate phosphodiesterase, and Nucleotide cyclase
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3092_Putative_diguanylate_phosphodiesterase,_and_Nucleotide_cyclase


id: CL:3112
description: Two-component regulatory system, and His Kinase A (phosphoacceptor) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3112_Two-component_regulatory_system,_and_His_Kinase_A_(phosphoacceptor)_domain


id: CL:3115
description: His Kinase A (phosphoacceptor) domain, and OmpR/PhoB-type DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3115_His_Kinase_A_(phosphoacceptor)_domain,_and_OmpR/PhoB-type_DNA-binding_domain


id: CL:3155
description: Mixed, incl. Sigma-54 interaction domain, conserved site, and PAS fold
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3155_Mixed,_incl._Sigma-54_interaction_domain,_conserved_site,_and_PAS_fold


id: CL:3178
description: CoA hydrolase activity, and MerR-type HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3178_CoA_hydrolase_activity,_and_MerR-type_HTH_domain


id: CL:3196
description: Mixed, incl. Autoinducer binding domain, and Quorum sensing
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3196_Mixed,_incl._Autoinducer_binding_domain,_and_Quorum_sensing


id: CL:3198
description: Mixed, incl. Autoinducer binding domain, and Quorum sensing
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3198_Mixed,_incl._Autoinducer_binding_domain,_and_Quorum_sensing


id: CL:3201
description: Autoinducer binding domain, and Quorum sensing
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3201_Autoinducer_binding_domain,_and_Quorum_sensing


id: CL:3216
description: Mixed, incl. Exopolysaccharide biosynthesis protein YbjH, and HI0933-like protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3216_Mixed,_incl._Exopolysaccharide_biosynthesis_protein_YbjH,_and_HI0933-like_protein


id: CL:323
description: Mixed, incl. Pseudouridine synthase, RluA-like, conserved site, and Peptidyl-proline modification
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:323_Mixed,_incl._Pseudouridine_synthase,_RluA-like,_conserved_site,_and_Peptidyl-proline_modification


id: CL:3230
description: Mixed, incl. N-formylglutamate amidohydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3230_Mixed,_incl._N-formylglutamate_amidohydrolase


id: CL:3239
description: Mixed, incl. Disulfide oxidoreductase activity, and Hydrolase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3239_Mixed,_incl._Disulfide_oxidoreductase_activity,_and_Hydrolase_activity


id: CL:324
description: Mixed, incl. Peptidyl-proline modification, and Response to superoxide
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:324_Mixed,_incl._Peptidyl-proline_modification,_and_Response_to_superoxide


id: CL:3240
description: Mixed, incl. Hydrolase activity, and Disulfide oxidoreductase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3240_Mixed,_incl._Hydrolase_activity,_and_Disulfide_oxidoreductase_activity


id: CL:3241
description: Mostly uncharacterized, incl. Exonuclease activity, and Cobaltochelatase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3241_Mostly_uncharacterized,_incl._Exonuclease_activity,_and_Cobaltochelatase_activity


id: CL:3243
description: Mixed, incl. Exonuclease activity, and Cobaltochelatase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3243_Mixed,_incl._Exonuclease_activity,_and_Cobaltochelatase_activity


id: CL:3245
description: Mostly uncharacterized, incl. Cobaltochelatase activity, and PD-(D/E)XK nuclease superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3245_Mostly_uncharacterized,_incl._Cobaltochelatase_activity,_and_PD-(D/E)XK_nuclease_superfamily


id: CL:3248
description: Mixed, incl. Cobaltochelatase activity, and NusB family
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3248_Mixed,_incl._Cobaltochelatase_activity,_and_NusB_family


id: CL:3250
description: Mixed, incl. NusB family, and lysyl-tRNA aminoacylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3250_Mixed,_incl._NusB_family,_and_lysyl-tRNA_aminoacylation


id: CL:3273
description: Mixed, incl. PD-(D/E)XK nuclease superfamily, and DNA helicase, UvrD/REP type
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3273_Mixed,_incl._PD-(D/E)XK_nuclease_superfamily,_and_DNA_helicase,_UvrD/REP_type


id: CL:3302
description: Mixed, incl. NAD+ kinase activity, and RlpA-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3302_Mixed,_incl._NAD+_kinase_activity,_and_RlpA-like_domain_superfamily


id: CL:3319
description: Mostly uncharacterized, incl. Methylamine metabolic process, and Triterpenoid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3319_Mostly_uncharacterized,_incl._Methylamine_metabolic_process,_and_Triterpenoid_metabolic_process


id: CL:3320
description: Mixed, incl. Methylamine metabolic process, and Triterpenoid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3320_Mixed,_incl._Methylamine_metabolic_process,_and_Triterpenoid_metabolic_process


id: CL:3321
description: Mixed, incl. Methylamine metabolic process, and Triterpenoid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3321_Mixed,_incl._Methylamine_metabolic_process,_and_Triterpenoid_metabolic_process


id: CL:3323
description: Triterpenoid metabolic process, and Methanol metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3323_Triterpenoid_metabolic_process,_and_Methanol_metabolic_process


id: CL:3342
description: Mixed, incl. DHH family, and HAD-hyrolase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3342_Mixed,_incl._DHH_family,_and_HAD-hyrolase-like


id: CL:3354
description: Mostly uncharacterized, incl. UspA, and Invasion protein B
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3354_Mostly_uncharacterized,_incl._UspA,_and_Invasion_protein_B


id: CL:3356
description: Mixed, incl. Invasion protein B, and Transcription-coupled nucleotide-excision repair
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3356_Mixed,_incl._Invasion_protein_B,_and_Transcription-coupled_nucleotide-excision_repair


id: CL:336
description: rRNA pseudouridine synthase activity, and SpoU rRNA Methylase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:336_rRNA_pseudouridine_synthase_activity,_and_SpoU_rRNA_Methylase_family


id: CL:3387
description: Mixed, incl. Aspartyl protease, and Glycoprotein metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3387_Mixed,_incl._Aspartyl_protease,_and_Glycoprotein_metabolic_process


id: CL:3398
description: Mixed, incl. Liposaccharide metabolic process, and Macromolecule localization
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3398_Mixed,_incl._Liposaccharide_metabolic_process,_and_Macromolecule_localization


id: CL:3399
description: Mixed, incl. Liposaccharide metabolic process, and Membrane organization
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3399_Mixed,_incl._Liposaccharide_metabolic_process,_and_Membrane_organization


id: CL:3400
description: Mixed, incl. Liposaccharide metabolic process, and Membrane organization
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3400_Mixed,_incl._Liposaccharide_metabolic_process,_and_Membrane_organization


id: CL:3401
description: Liposaccharide metabolic process, and Membrane assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3401_Liposaccharide_metabolic_process,_and_Membrane_assembly


id: CL:3403
description: Liposaccharide metabolic process, and Membrane assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3403_Liposaccharide_metabolic_process,_and_Membrane_assembly


id: CL:3405
description: Liposaccharide metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3405_Liposaccharide_metabolic_process


id: CL:3432
description: Permease LptG/LptF-related, and Lipopolysaccharide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3432_Permease_LptG/LptF-related,_and_Lipopolysaccharide_transport


id: CL:346
description: RNA degradation, and Spliceosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:346_RNA_degradation,_and_Spliceosome


id: CL:3460
description: Mixed, incl. Outer membrane protein, bacterial, and WD40-like beta propeller
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3460_Mixed,_incl._Outer_membrane_protein,_bacterial,_and_WD40-like_beta_propeller


id: CL:3461
description: Mixed, incl. Four-way junction helicase activity, and Periplasm
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3461_Mixed,_incl._Four-way_junction_helicase_activity,_and_Periplasm


id: CL:3464
description: Periplasm, and Energy transducer activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3464_Periplasm,_and_Energy_transducer_activity


id: CL:348
description: Spliceosome, and 3-5 exonuclease
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:348_Spliceosome,_and_3-5_exonuclease


id: CL:3480
description: Porin activity, and WD40-like beta propeller
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3480_Porin_activity,_and_WD40-like_beta_propeller


id: CL:3493
description: Mixed, incl. Biotin-lipoyl like, and Lipoprotein transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3493_Mixed,_incl._Biotin-lipoyl_like,_and_Lipoprotein_transport


id: CL:3494
description: Mixed, incl. Lipoprotein transport, and Membrane component of ABC transporter, predicted
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3494_Mixed,_incl._Lipoprotein_transport,_and_Membrane_component_of_ABC_transporter,_predicted


id: CL:3496
description: Mixed, incl. Membrane component of ABC transporter, predicted, and Lipoprotein transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3496_Mixed,_incl._Membrane_component_of_ABC_transporter,_predicted,_and_Lipoprotein_transport


id: CL:3516
description: Outer membrane efflux protein, and Biotin-lipoyl like
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3516_Outer_membrane_efflux_protein,_and_Biotin-lipoyl_like


id: CL:3532
description: Mixed, incl. Phospholipid transport, and Type 1 protein exporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3532_Mixed,_incl._Phospholipid_transport,_and_Type_1_protein_exporter


id: CL:3533
description: Mixed, incl. Type 1 protein exporter, and ABC-2 transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3533_Mixed,_incl._Type_1_protein_exporter,_and_ABC-2_transporter


id: CL:3535
description: Mixed, incl. Type 1 protein exporter, and MIP18 family-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3535_Mixed,_incl._Type_1_protein_exporter,_and_MIP18_family-like


id: CL:3553
description: Mixed, incl. ABC-2 transporter, and ClpP/crotonase-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3553_Mixed,_incl._ABC-2_transporter,_and_ClpP/crotonase-like_domain_superfamily


id: CL:3579
description: Mixed, incl. Peptidoglycan L,D-transpeptidase activity, and CAP domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3579_Mixed,_incl._Peptidoglycan_L,D-transpeptidase_activity,_and_CAP_domain


id: CL:3580
description: Mixed, incl. Peptidoglycan L,D-transpeptidase activity, and CAP domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3580_Mixed,_incl._Peptidoglycan_L,D-transpeptidase_activity,_and_CAP_domain


id: CL:3581
description: Peptidoglycan L,D-transpeptidase activity, and CAP domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3581_Peptidoglycan_L,D-transpeptidase_activity,_and_CAP_domain


id: CL:3584
description: Peptidoglycan L,D-transpeptidase activity, and CAP domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3584_Peptidoglycan_L,D-transpeptidase_activity,_and_CAP_domain


id: CL:360
description: Ribonuclease E/G, and RNA catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:360_Ribonuclease_E/G,_and_RNA_catabolic_process


id: CL:3608
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3608_Mixed,_incl._Hedgehog_signalling/DD-peptidase_zinc-binding_domain_superfamily,_and_Phytase-like_domain

description:
  Mixed, incl. Hedgehog signalling/DD-peptidase zinc-binding domain superfamily, and Phytase-like domain


id: CL:3617
description: Protein secretion, and tRNA pseudouridine synthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3617_Protein_secretion,_and_tRNA_pseudouridine_synthesis


id: CL:3628
description: Mixed, incl. GlnD PII-uridylyltransferase, and Nitrogen regulatory protein PII
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3628_Mixed,_incl._GlnD_PII-uridylyltransferase,_and_Nitrogen_regulatory_protein_PII


id: CL:3629
description: Mixed, incl. Nucleotide excision repair, and Serine aminopeptidase, S33
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3629_Mixed,_incl._Nucleotide_excision_repair,_and_Serine_aminopeptidase,_S33


id: CL:3630
description: Mixed, incl. DNA ligase activity, and Calcineurin-like phosphoesterase
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3630_Mixed,_incl._DNA_ligase_activity,_and_Calcineurin-like_phosphoesterase


id: CL:3644
description: Mixed, incl. Serine aminopeptidase, S33, and DNA-binding HTH domain, TetR-type
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3644_Mixed,_incl._Serine_aminopeptidase,_S33,_and_DNA-binding_HTH_domain,_TetR-type


id: CL:3657
description: GlnD PII-uridylyltransferase, and Nitrogen regulatory protein PII
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3657_GlnD_PII-uridylyltransferase,_and_Nitrogen_regulatory_protein_PII


id: CL:3676
description: Mixed, incl. RmuC family, and GYF domain 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3676_Mixed,_incl._RmuC_family,_and_GYF_domain_2


id: CL:3679
description: Mixed, incl. GYF domain 2, and Protein of unknown function DUF2927
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3679_Mixed,_incl._GYF_domain_2,_and_Protein_of_unknown_function_DUF2927


id: CL:369
description: Mixed, incl. 16S rRNA methyltransferase RsmB/F, and tRNA methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:369_Mixed,_incl._16S_rRNA_methyltransferase_RsmB/F,_and_tRNA_methyltransferase_activity


id: CL:3708
description: Mixed, incl. YgjP-like, metallopeptidase domain, and Iron ion homeostasis
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3708_Mixed,_incl._YgjP-like,_metallopeptidase_domain,_and_Iron_ion_homeostasis


id: CL:3724
description: Mixed, incl. Iron-sulfur cluster assembly, and Aminotransferase class V domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3724_Mixed,_incl._Iron-sulfur_cluster_assembly,_and_Aminotransferase_class_V_domain


id: CL:3725
description: Iron-sulfur cluster assembly, and Aminotransferase class V domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3725_Iron-sulfur_cluster_assembly,_and_Aminotransferase_class_V_domain


id: CL:3727
description: Mixed, incl. Iron-sulfur cluster assembly complex, and Aminotransferase class-V
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3727_Mixed,_incl._Iron-sulfur_cluster_assembly_complex,_and_Aminotransferase_class-V


id: CL:3729
description: Iron-sulfur cluster assembly complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3729_Iron-sulfur_cluster_assembly_complex


id: CL:3751
description: Iron-sulfur cluster assembly, and Iron-dependent Transcriptional regulator
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3751_Iron-sulfur_cluster_assembly,_and_Iron-dependent_Transcriptional_regulator


id: CL:3754
description: Iron-sulfur cluster assembly, and Iron-dependent Transcriptional regulator
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3754_Iron-sulfur_cluster_assembly,_and_Iron-dependent_Transcriptional_regulator


id: CL:3770
description: Mixed, incl. Ribosomal large subunit assembly, and Quorum sensing
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3770_Mixed,_incl._Ribosomal_large_subunit_assembly,_and_Quorum_sensing


id: CL:3787
description: Mixed, incl. Queuosine biosynthesis, and DDE transposase sub-family
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3787_Mixed,_incl._Queuosine_biosynthesis,_and_DDE_transposase_sub-family


id: CL:3788
description: Mixed, incl. DDE transposase sub-family, and Pseudouridine synthase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3788_Mixed,_incl._DDE_transposase_sub-family,_and_Pseudouridine_synthase_activity


id: CL:3790
description: Mixed, incl. AP endonuclease 1, and Endonuclease III, iron-sulphur binding site
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3790_Mixed,_incl._AP_endonuclease_1,_and_Endonuclease_III,_iron-sulphur_binding_site


id: CL:3818
description: Queuosine biosynthesis, and Sugar (and other) transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3818_Queuosine_biosynthesis,_and_Sugar_(and_other)_transporter


id: CL:3841
description: Mixed, incl. TAT protein transport complex, and Potassium ion transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3841_Mixed,_incl._TAT_protein_transport_complex,_and_Potassium_ion_transmembrane_transporter_activity


id: CL:3843
description: Potassium ion transmembrane transporter activity, and DsbB-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3843_Potassium_ion_transmembrane_transporter_activity,_and_DsbB-like_superfamily


id: CL:3857
description: TAT protein transport complex, and WYL domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3857_TAT_protein_transport_complex,_and_WYL_domain


id: CL:3867
description: Tetrapyrrole biosynthetic process, and Endonuclease III
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3867_Tetrapyrrole_biosynthetic_process,_and_Endonuclease_III


id: CL:3869
description: Tetrapyrrole biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3869_Tetrapyrrole_biosynthetic_process


id: CL:3873
description: CobB/CobQ-like glutamine amidotransferase, and Chlorophyll metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3873_CobB/CobQ-like_glutamine_amidotransferase,_and_Chlorophyll_metabolic_process


id: CL:389
description: Mixed, incl. tRNA pseudouridine synthesis, and Maturation of SSU-rRNA
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:389_Mixed,_incl._tRNA_pseudouridine_synthesis,_and_Maturation_of_SSU-rRNA


id: CL:3897
description: Porphyrin biosynthesis, and Protoporphyrinogen oxidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3897_Porphyrin_biosynthesis,_and_Protoporphyrinogen_oxidase_activity


id: CL:3899
description: Siroheme metabolic process, and Peptidyl-cysteine modification
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3899_Siroheme_metabolic_process,_and_Peptidyl-cysteine_modification


id: CL:3922
description: Mixed, incl. Endonuclease III, and Major Facilitator Superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3922_Mixed,_incl._Endonuclease_III,_and_Major_Facilitator_Superfamily


id: CL:3942
description: Mixed, incl. Polysaccharide metabolic process, and O-Antigen nucleotide sugar biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3942_Mixed,_incl._Polysaccharide_metabolic_process,_and_O-Antigen_nucleotide_sugar_biosynthesis


id: CL:3943
description: Mixed, incl. Polysaccharide metabolic process, and O-Antigen nucleotide sugar biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3943_Mixed,_incl._Polysaccharide_metabolic_process,_and_O-Antigen_nucleotide_sugar_biosynthesis


id: CL:3944
description: Polysaccharide biosynthetic process, and O-Antigen nucleotide sugar biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3944_Polysaccharide_biosynthetic_process,_and_O-Antigen_nucleotide_sugar_biosynthesis


id: CL:3946
description: Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and Glycosyl transferases group 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3946_Mixed,_incl._O-Antigen_nucleotide_sugar_biosynthesis,_and_Glycosyl_transferases_group_1


id: CL:3947
description: Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and Glycosyl transferases group 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3947_Mixed,_incl._O-Antigen_nucleotide_sugar_biosynthesis,_and_Glycosyl_transferases_group_1


id: CL:3948
description: O-Antigen nucleotide sugar biosynthesis, and Glycosyl transferases group 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3948_O-Antigen_nucleotide_sugar_biosynthesis,_and_Glycosyl_transferases_group_1


id: CL:3949
description: O-Antigen nucleotide sugar biosynthesis, and Glycosyl transferases group 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3949_O-Antigen_nucleotide_sugar_biosynthesis,_and_Glycosyl_transferases_group_1


id: CL:3951
description: O-Antigen nucleotide sugar biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3951_O-Antigen_nucleotide_sugar_biosynthesis


id: CL:3976
description: NAD-dependent epimerase/dehydratase, and Phosphate acyltransferases
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3976_NAD-dependent_epimerase/dehydratase,_and_Phosphate_acyltransferases


id: CL:3985
description: Mixed, incl. Glycosyl transferase family 2, and Glycosyl transferase, family 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3985_Mixed,_incl._Glycosyl_transferase_family_2,_and_Glycosyl_transferase,_family_1


id: CL:3987
description: Glycosyl transferase family 2, and Glycosyl transferase, family 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:3987_Glycosyl_transferase_family_2,_and_Glycosyl_transferase,_family_1


id: CL:401
description: Mixed, incl. rRNA (guanine-N7)-methylation, and AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:401_Mixed,_incl._rRNA_(guanine-N7)-methylation,_and_AAA_domain


id: CL:4012
description: Methyltransferase FkbM, and Lipopolysaccharide metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4012_Methyltransferase_FkbM,_and_Lipopolysaccharide_metabolic_process


id: CL:4022
description: Mixed, incl. Mannosylation, and Sulfotransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4022_Mixed,_incl._Mannosylation,_and_Sulfotransferase


id: CL:403
description: rRNA (guanine-N7)-methylation, and MnmG, N-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:403_rRNA_(guanine-N7)-methylation,_and_MnmG,_N-terminal_domain


id: CL:4035
description: Starch and sucrose metabolism, and GYF domain 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4035_Starch_and_sucrose_metabolism,_and_GYF_domain_2


id: CL:4039
description: Glycogen metabolic process, and Alpha amylase, catalytic domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4039_Glycogen_metabolic_process,_and_Alpha_amylase,_catalytic_domain


id: CL:4053
description: Alpha amylase, catalytic domain, and Adenylyltransferase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4053_Alpha_amylase,_catalytic_domain,_and_Adenylyltransferase_complex


id: CL:4087
description: Mixed, incl. Inositol monophosphatase-like, and SIS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4087_Mixed,_incl._Inositol_monophosphatase-like,_and_SIS_domain


id: CL:4090
description: Mixed, incl. Inositol monophosphatase-like, and SIS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4090_Mixed,_incl._Inositol_monophosphatase-like,_and_SIS_domain


id: CL:4120
description: Mixed, incl. Acyl-CoA N-acyltransferase, and Metalloprotease
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4120_Mixed,_incl._Acyl-CoA_N-acyltransferase,_and_Metalloprotease


id: CL:4122
description: Mixed, incl. Peptidase M3A/M3B, and Blockage of phagosome acidification
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4122_Mixed,_incl._Peptidase_M3A/M3B,_and_Blockage_of_phagosome_acidification


id: CL:4141
description: Mixed, incl. Phosphate acyltransferases, and Carotenoid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4141_Mixed,_incl._Phosphate_acyltransferases,_and_Carotenoid_metabolic_process


id: CL:4157
description: Mixed, incl. Transmembrane helix, and RNA polymerase sigma factor 70, region 4 type 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4157_Mixed,_incl._Transmembrane_helix,_and_RNA_polymerase_sigma_factor_70,_region_4_type_2


id: CL:4158
description: Mixed, incl. Transmembrane helix, and RNA polymerase sigma factor 70, region 4 type 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4158_Mixed,_incl._Transmembrane_helix,_and_RNA_polymerase_sigma_factor_70,_region_4_type_2


id: CL:4159
description: Mostly uncharacterized, incl. RNA polymerase sigma factor 70, region 4 type 2, and Lipid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4159_Mostly_uncharacterized,_incl._RNA_polymerase_sigma_factor_70,_region_4_type_2,_and_Lipid_transport


id: CL:4161
description: Mostly uncharacterized, incl. RNA polymerase sigma factor 70, region 4 type 2, and Lipid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4161_Mostly_uncharacterized,_incl._RNA_polymerase_sigma_factor_70,_region_4_type_2,_and_Lipid_transport


id: CL:4163
description: Mostly uncharacterized, incl. Lipid transport, and Paraquat-inducible protein A
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4163_Mostly_uncharacterized,_incl._Lipid_transport,_and_Paraquat-inducible_protein_A


id: CL:4164
description: Mixed, incl. Virulence factor BrkB, and Sigma-70, region 4
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4164_Mixed,_incl._Virulence_factor_BrkB,_and_Sigma-70,_region_4


id: CL:4166
description: Mixed, incl. Sigma-70, region 4, and PRC-barrel domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4166_Mixed,_incl._Sigma-70,_region_4,_and_PRC-barrel_domain


id: CL:4168
description: Mixed, incl. Sigma-70, region 4, and HWE histidine kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4168_Mixed,_incl._Sigma-70,_region_4,_and_HWE_histidine_kinase


id: CL:4170
description: Sigma-70, region 4, and Signal transduction histidine kinase, HWE region
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4170_Sigma-70,_region_4,_and_Signal_transduction_histidine_kinase,_HWE_region


id: CL:418
description: Mixed, incl. PP-loop family, and Regulation of signaling
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:418_Mixed,_incl._PP-loop_family,_and_Regulation_of_signaling


id: CL:4189
description: Virulence factor BrkB, and Ribosome binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4189_Virulence_factor_BrkB,_and_Ribosome_binding


id: CL:4217
description: Mixed, incl. Paraquat-inducible protein A, and Transglycosylase SLT domain 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4217_Mixed,_incl._Paraquat-inducible_protein_A,_and_Transglycosylase_SLT_domain_1


id: CL:4219
description: Mixed, incl. Paraquat-inducible protein A, and Transglycosylase SLT domain 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4219_Mixed,_incl._Paraquat-inducible_protein_A,_and_Transglycosylase_SLT_domain_1


id: CL:4220
description: Transglycosylase SLT domain 1, and Crp-like helix-turn-helix domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4220_Transglycosylase_SLT_domain_1,_and_Crp-like_helix-turn-helix_domain


id: CL:4229
description: Paraquat-inducible protein A, and Mce/MlaD
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4229_Paraquat-inducible_protein_A,_and_Mce/MlaD


id: CL:4256
description: Mixed, incl. LOG family, and Lysin motif
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4256_Mixed,_incl._LOG_family,_and_Lysin_motif


id: CL:4273
description: Mixed, incl. Glycerolipid biosynthetic process, and Chlorocyclohexane and chlorobenzene degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4273_Mixed,_incl._Glycerolipid_biosynthetic_process,_and_Chlorocyclohexane_and_chlorobenzene_degradation


id: CL:4274
description: Mixed, incl. Glycerolipid biosynthetic process, and Major facilitator superfamily domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4274_Mixed,_incl._Glycerolipid_biosynthetic_process,_and_Major_facilitator_superfamily_domain


id: CL:4276
description: Mixed, incl. Response to antibiotic, and Phospholipid catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4276_Mixed,_incl._Response_to_antibiotic,_and_Phospholipid_catabolic_process


id: CL:428
description: Mixed, incl. DNA replication, and DNA repair
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:428_Mixed,_incl._DNA_replication,_and_DNA_repair


id: CL:429
description: Mixed, incl. Mismatch repair, and DNA-templated DNA replication
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:429_Mixed,_incl._Mismatch_repair,_and_DNA-templated_DNA_replication


id: CL:4298
description: Mixed, incl. DoxX, and Regulation of signaling
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4298_Mixed,_incl._DoxX,_and_Regulation_of_signaling


id: CL:4314
description: Mixed, incl. LysE type translocator, and Nickel cation transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4314_Mixed,_incl._LysE_type_translocator,_and_Nickel_cation_transport


id: CL:4315
description: Mixed, incl. LysE type translocator, and Nickel cation transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4315_Mixed,_incl._LysE_type_translocator,_and_Nickel_cation_transport


id: CL:4317
description: Mixed, incl. Nickel cation transport, and Vitamin catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4317_Mixed,_incl._Nickel_cation_transport,_and_Vitamin_catabolic_process


id: CL:432
description: DNA repair, and DNA conformation change
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:432_DNA_repair,_and_DNA_conformation_change


id: CL:434
description: DNA repair, and DNA helicase, UvrD/REP type
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:434_DNA_repair,_and_DNA_helicase,_UvrD/REP_type


id: CL:4342
description: Mixed, incl. Glycosyl transferase family 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4342_Mixed,_incl._Glycosyl_transferase_family_2


id: CL:4352
description: Mostly uncharacterized, incl. Antioxidant, and Methyltransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4352_Mostly_uncharacterized,_incl._Antioxidant,_and_Methyltransferase_domain


id: CL:4354
description: Mixed, incl. Methyltransferase domain, and Domain of unknown function (DUF305)
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4354_Mixed,_incl._Methyltransferase_domain,_and_Domain_of_unknown_function_(DUF305)


id: CL:4382
description: Mixed, incl. Magnesium ion transport, and Sodium/solute symporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4382_Mixed,_incl._Magnesium_ion_transport,_and_Sodium/solute_symporter


id: CL:4393
description: Mixed, incl. LysR, substrate-binding, and Carboxylic acid catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4393_Mixed,_incl._LysR,_substrate-binding,_and_Carboxylic_acid_catabolic_process


id: CL:4394
description: Mixed, incl. LysR, substrate-binding, and Benzoate degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4394_Mixed,_incl._LysR,_substrate-binding,_and_Benzoate_degradation


id: CL:4395
description: Mixed, incl. Benzoate degradation, and Enolase-like, C-terminal domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4395_Mixed,_incl._Benzoate_degradation,_and_Enolase-like,_C-terminal_domain_superfamily


id: CL:4396
description: Mixed, incl. Benzoate degradation, and Enolase-like, C-terminal domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4396_Mixed,_incl._Benzoate_degradation,_and_Enolase-like,_C-terminal_domain_superfamily


id: CL:4397
description: Mixed, incl. Dioxygenase, and Shikimate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4397_Mixed,_incl._Dioxygenase,_and_Shikimate_metabolic_process


id: CL:4400
description: Mixed, incl. Proline racemase, and 3-hydroxyisobutyrate dehydrogenase-related
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4400_Mixed,_incl._Proline_racemase,_and_3-hydroxyisobutyrate_dehydrogenase-related


id: CL:4416
description: Shikimate metabolic process, and Transposase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4416_Shikimate_metabolic_process,_and_Transposase_activity


id: CL:4430
description: Mixed, incl. Enolase-like, C-terminal domain superfamily, and Dihydrodipicolinate synthetase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4430_Mixed,_incl._Enolase-like,_C-terminal_domain_superfamily,_and_Dihydrodipicolinate_synthetase_family


id: CL:4433
description: L-rhamnonate dehydratase-like, and Dihydrodipicolinate synthetase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4433_L-rhamnonate_dehydratase-like,_and_Dihydrodipicolinate_synthetase_family


id: CL:4453
description: Mixed, incl. Fermentation, and Benzoate degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4453_Mixed,_incl._Fermentation,_and_Benzoate_degradation


id: CL:4455
description: Mixed, incl. Fermentation, and Coenzyme A transferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4455_Mixed,_incl._Fermentation,_and_Coenzyme_A_transferase


id: CL:4457
description: Dioxygenase, and Adenylosuccinate lyase C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4457_Dioxygenase,_and_Adenylosuccinate_lyase_C-terminal


id: CL:448
description: Mixed, incl. DNA recombination and repair protein RecA-like, ATP-binding domain, and LexA-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:448_Mixed,_incl._DNA_recombination_and_repair_protein_RecA-like,_ATP-binding_domain,_and_LexA-like


id: CL:4484
description: Mixed, incl. LysR, substrate-binding, and Siderophore uptake transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4484_Mixed,_incl._LysR,_substrate-binding,_and_Siderophore_uptake_transmembrane_transporter_activity


id: CL:4485
description: Mixed, incl. LysR, substrate-binding, and Siderophore uptake transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4485_Mixed,_incl._LysR,_substrate-binding,_and_Siderophore_uptake_transmembrane_transporter_activity


id: CL:4486
description: LysR, substrate-binding, and Siderophore uptake transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4486_LysR,_substrate-binding,_and_Siderophore_uptake_transmembrane_transporter_activity


id: CL:4489
description: Bacterial regulatory helix-turn-helix protein, lysR family
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4489_Bacterial_regulatory_helix-turn-helix_protein,_lysR_family


id: CL:4510
description: Mixed, incl. Siderophore uptake transmembrane transporter activity, and L-ascorbic acid binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4510_Mixed,_incl._Siderophore_uptake_transmembrane_transporter_activity,_and_L-ascorbic_acid_binding


id: CL:4524
description: Aldo/keto reductase family, and AraC-like ligand binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4524_Aldo/keto_reductase_family,_and_AraC-like_ligand_binding_domain


id: CL:4539
description: Mixed, incl. 2-hydroxyglutarate dehydrogenase activity, and Sugar (and other) transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4539_Mixed,_incl._2-hydroxyglutarate_dehydrogenase_activity,_and_Sugar_(and_other)_transporter


id: CL:4549
description: Mixed, incl. TRAP transporter large membrane protein DctM, and C4-dicarboxylate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4549_Mixed,_incl._TRAP_transporter_large_membrane_protein_DctM,_and_C4-dicarboxylate_transport


id: CL:4550
description: Mixed, incl. TRAP transporter large membrane protein DctM, and C4-dicarboxylate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4550_Mixed,_incl._TRAP_transporter_large_membrane_protein_DctM,_and_C4-dicarboxylate_transport


id: CL:4551
description: Mixed, incl. C4-dicarboxylate transport, and TRAP transporter solute receptor DctP
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4551_Mixed,_incl._C4-dicarboxylate_transport,_and_TRAP_transporter_solute_receptor_DctP


id: CL:4552
description: Mixed, incl. C4-dicarboxylate transport, and TRAP transporter solute receptor DctP
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4552_Mixed,_incl._C4-dicarboxylate_transport,_and_TRAP_transporter_solute_receptor_DctP


id: CL:4554
description: C4-dicarboxylate transport, and TRAP transporter solute receptor DctP
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4554_C4-dicarboxylate_transport,_and_TRAP_transporter_solute_receptor_DctP


id: CL:4570
description: Mixed, incl. Malate/L-lactate dehydrogenase, and TRAP transporter solute receptor, DctP family
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4570_Mixed,_incl._Malate/L-lactate_dehydrogenase,_and_TRAP_transporter_solute_receptor,_DctP_family


id: CL:4582
description: Mixed, incl. Mannonate dehydratase, and Mannitol dehydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4582_Mixed,_incl._Mannonate_dehydratase,_and_Mannitol_dehydrogenase


id: CL:4601
description: Protein arginylation, and TRAP transporter large membrane protein DctM
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4601_Protein_arginylation,_and_TRAP_transporter_large_membrane_protein_DctM


id: CL:4619
description: Mixed, incl. Fatty acid biosynthesis, and EamA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4619_Mixed,_incl._Fatty_acid_biosynthesis,_and_EamA_domain


id: CL:4628
description: Mostly uncharacterized, incl. EamA domain, and Glutathione metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4628_Mostly_uncharacterized,_incl._EamA_domain,_and_Glutathione_metabolic_process


id: CL:4629
description: Mixed, incl. EamA domain, and Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4629_Mixed,_incl._EamA_domain,_and_Glyoxalase/Bleomycin_resistance_protein/Dihydroxybiphenyl_dioxygenase


id: CL:4630
description: Mixed, incl. D-lyxose isomerase, and Activator of Hsp90 ATPase homolog 1-like protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4630_Mixed,_incl._D-lyxose_isomerase,_and_Activator_of_Hsp90_ATPase_homolog_1-like_protein


id: CL:4631
description: Mixed, incl. D-lyxose isomerase, and Glutamine amidotransferase domain containing protein ChyE-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4631_Mixed,_incl._D-lyxose_isomerase,_and_Glutamine_amidotransferase_domain_containing_protein_ChyE-like


id: CL:4634
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4634_Glutamine_amidotransferase_domain_containing_protein_ChyE-like,_and_L-methylmalonyl-CoA_metabolic_process

description:
  Glutamine amidotransferase domain containing protein ChyE-like, and L-methylmalonyl-CoA metabolic process


id: CL:464
description: Mismatched DNA binding, and Primosomal protein N
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:464_Mismatched_DNA_binding,_and_Primosomal_protein_N


id: CL:4655
description: Activator of Hsp90 ATPase homolog 1-like protein, and HTH ArsR-type DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4655_Activator_of_Hsp90_ATPase_homolog_1-like_protein,_and_HTH_ArsR-type_DNA-binding_domain


id: CL:4669
description: Mixed, incl. EamA domain, and Protein of unknown function DUF2794
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4669_Mixed,_incl._EamA_domain,_and_Protein_of_unknown_function_DUF2794


id: CL:4671
description: EamA domain, and D-alanine catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4671_EamA_domain,_and_D-alanine_catabolic_process


id: CL:4689
description: Mixed, incl. Protein of unknown function DUF2794, and NYN domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4689_Mixed,_incl._Protein_of_unknown_function_DUF2794,_and_NYN_domain


id: CL:4704
description: Mixed, incl. Glutathione metabolic process, and Sulphur transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4704_Mixed,_incl._Glutathione_metabolic_process,_and_Sulphur_transport


id: CL:4705
description: Mixed, incl. Glutathione metabolic process, and Sulphur transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4705_Mixed,_incl._Glutathione_metabolic_process,_and_Sulphur_transport


id: CL:4709
description: Sulphide quinone-reductase, and Sulphur transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4709_Sulphide_quinone-reductase,_and_Sulphur_transport


id: CL:4723
description: Mixed, incl. Methyltransferase FkbM, and Transposition
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4723_Mixed,_incl._Methyltransferase_FkbM,_and_Transposition


id: CL:4732
description: Mixed, incl. tRNA thio-modification, and Ferric-uptake regulator
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4732_Mixed,_incl._tRNA_thio-modification,_and_Ferric-uptake_regulator


id: CL:4744
description: Mixed, incl. MgtC family, and Cell surface
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4744_Mixed,_incl._MgtC_family,_and_Cell_surface


id: CL:4759
description: Mixed, incl. Division septum assembly, and Protein of unknown function DUF1127
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4759_Mixed,_incl._Division_septum_assembly,_and_Protein_of_unknown_function_DUF1127


id: CL:4775
description: Mixed, incl. ABC transporter, BtuC-like, and Metal ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4775_Mixed,_incl._ABC_transporter,_BtuC-like,_and_Metal_ion_transport


id: CL:4776
description: Mixed, incl. FecCD transport family, and Periplasmic binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4776_Mixed,_incl._FecCD_transport_family,_and_Periplasmic_binding_protein


id: CL:4777
description: Mixed, incl. FecCD transport family, and Periplasmic binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4777_Mixed,_incl._FecCD_transport_family,_and_Periplasmic_binding_protein


id: CL:4779
description: Mixed, incl. FecCD transport family, and Periplasmic binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4779_Mixed,_incl._FecCD_transport_family,_and_Periplasmic_binding_protein


id: CL:478
description: DNA polymerase activity, and DNA replication
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:478_DNA_polymerase_activity,_and_DNA_replication


id: CL:4780
description: FecCD transport family, and Periplasmic binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4780_FecCD_transport_family,_and_Periplasmic_binding_protein


id: CL:4783
description: Periplasmic binding protein, and ABC transporter, permease protein, BtuC-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4783_Periplasmic_binding_protein,_and_ABC_transporter,_permease_protein,_BtuC-like


id: CL:479
description: DNA polymerase activity, and Primosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:479_DNA_polymerase_activity,_and_Primosome


id: CL:4807
description: Mixed, incl. Biopolymer transport protein ExbD/TolR, and TonB dependent receptor
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4807_Mixed,_incl._Biopolymer_transport_protein_ExbD/TolR,_and_TonB_dependent_receptor


id: CL:4809
description: Biopolymer transport protein ExbD/TolR, and Energy transducer activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4809_Biopolymer_transport_protein_ExbD/TolR,_and_Energy_transducer_activity


id: CL:4821
description: ABC transporter, permease protein, BtuC-like, and Periplasmic binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4821_ABC_transporter,_permease_protein,_BtuC-like,_and_Periplasmic_binding_protein


id: CL:4831
description: Thiamine transport, and Response to reactive oxygen species
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4831_Thiamine_transport,_and_Response_to_reactive_oxygen_species


id: CL:4841
description: Mixed, incl. Cellular response to pH, and Pyridoxamine 5-phosphate oxidase
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4841_Mixed,_incl._Cellular_response_to_pH,_and_Pyridoxamine_5-phosphate_oxidase


id: CL:4853
description: Mixed, incl. ABC 3 transport family, and Thioredoxin domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4853_Mixed,_incl._ABC_3_transport_family,_and_Thioredoxin_domain


id: CL:4854
description: Mixed, incl. Copper chaperone SCO1/SenC, and Thioredoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4854_Mixed,_incl._Copper_chaperone_SCO1/SenC,_and_Thioredoxin


id: CL:4856
description: Copper chaperone SCO1/SenC, and Copper chaperone PCuAC
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4856_Copper_chaperone_SCO1/SenC,_and_Copper_chaperone_PCuAC


id: CL:4868
description: Mixed, incl. Thioredoxin, and Aspartyl protease
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4868_Mixed,_incl._Thioredoxin,_and_Aspartyl_protease


id: CL:4882
description: ABC 3 transport family, and Zinc-uptake complex component A periplasmic
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4882_ABC_3_transport_family,_and_Zinc-uptake_complex_component_A_periplasmic


id: CL:4902
description: Mixed, incl. ABC transporters, and NagB/RpiA transferase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4902_Mixed,_incl._ABC_transporters,_and_NagB/RpiA_transferase-like


id: CL:4903
description: Mixed, incl. Periplasmic binding protein, and ABC transporter, permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4903_Mixed,_incl._Periplasmic_binding_protein,_and_ABC_transporter,_permease


id: CL:4904
description: Mixed, incl. Periplasmic binding protein, and ABC transporter, permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4904_Mixed,_incl._Periplasmic_binding_protein,_and_ABC_transporter,_permease


id: CL:4905
description: Mixed, incl. ABC transporter, permease, and Periplasmic binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4905_Mixed,_incl._ABC_transporter,_permease,_and_Periplasmic_binding_protein


id: CL:4906
description: Mixed, incl. ABC transporter, permease, and Periplasmic binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4906_Mixed,_incl._ABC_transporter,_permease,_and_Periplasmic_binding_protein


id: CL:4907
description: ABC transporter, permease, and Pentose transmembrane transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4907_ABC_transporter,_permease,_and_Pentose_transmembrane_transport


id: CL:4909
description: ABC transporter, permease, and Pentose transmembrane transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4909_ABC_transporter,_permease,_and_Pentose_transmembrane_transport


id: CL:4911
description: ABC transporter, permease, and Pentose transmembrane transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4911_ABC_transporter,_permease,_and_Pentose_transmembrane_transport


id: CL:4912
description: Pentose transmembrane transport, and ABC transporter, permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4912_Pentose_transmembrane_transport,_and_ABC_transporter,_permease


id: CL:4925
description: Pentose transmembrane transport, and ABC transporter, permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4925_Pentose_transmembrane_transport,_and_ABC_transporter,_permease


id: CL:4943
description: ABC-type D-ribose transporter activity, and Periplasmic binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4943_ABC-type_D-ribose_transporter_activity,_and_Periplasmic_binding_protein


id: CL:4960
description: Gluconolactonase activity, and ABC transporter, permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4960_Gluconolactonase_activity,_and_ABC_transporter,_permease


id: CL:4972
description: Mixed, incl. DeoR C-terminal sensor domain, and TM0957-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4972_Mixed,_incl._DeoR_C-terminal_sensor_domain,_and_TM0957-like_superfamily


id: CL:4974
description: Mixed, incl. TM0957-like superfamily, and Putative sugar-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4974_Mixed,_incl._TM0957-like_superfamily,_and_Putative_sugar-binding_domain


id: CL:4993
description: Mixed, incl. DeoR C terminal sensor domain, and TM0957-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:4993_Mixed,_incl._DeoR_C_terminal_sensor_domain,_and_TM0957-like_superfamily


id: CL:5007
description: Mixed, incl. Inositol catabolic process, and MocE Rieske [2Fe-2S]
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5007_Mixed,_incl._Inositol_catabolic_process,_and_MocE_Rieske_[2Fe-2S]


id: CL:5008
description: Mixed, incl. Inositol catabolic process, and Xylose isomerase-like, TIM barrel domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5008_Mixed,_incl._Inositol_catabolic_process,_and_Xylose_isomerase-like,_TIM_barrel_domain


id: CL:5009
description: Mixed, incl. Steroid biosynthesis, and Hydroxypyruvate isomerase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5009_Mixed,_incl._Steroid_biosynthesis,_and_Hydroxypyruvate_isomerase-like


id: CL:5010
description: Mixed, incl. Hydroxypyruvate isomerase-like, and Ketopantoate hydroxymethyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5010_Mixed,_incl._Hydroxypyruvate_isomerase-like,_and_Ketopantoate_hydroxymethyltransferase


id: CL:5019
description: Mixed, incl. Steroid biosynthesis, and Bacterial regulatory proteins, lacI family
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5019_Mixed,_incl._Steroid_biosynthesis,_and_Bacterial_regulatory_proteins,_lacI_family


id: CL:503
description: Mixed, incl. DNA clamp superfamily, and Bacterial dnaA protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:503_Mixed,_incl._DNA_clamp_superfamily,_and_Bacterial_dnaA__protein


id: CL:5043
description: Mixed, incl. MocE Rieske [2Fe-2S], and Fatty acid desaturase
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5043_Mixed,_incl._MocE_Rieske_[2Fe-2S],_and_Fatty_acid_desaturase


id: CL:5044
description: Mixed, incl. Steroid biosynthesis, and Ketopantoate hydroxymethyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5044_Mixed,_incl._Steroid_biosynthesis,_and_Ketopantoate_hydroxymethyltransferase


id: CL:5053
description: Fatty acid desaturase, and MocE Rieske [2Fe-2S]
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5053_Fatty_acid_desaturase,_and_MocE_Rieske_[2Fe-2S]


id: CL:5064
description: Monosaccharide binding, and Fructokinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5064_Monosaccharide_binding,_and_Fructokinase_activity


id: CL:5079
description: Mixed, incl. S-adenosylmethionine cycle, and Putative sugar-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5079_Mixed,_incl._S-adenosylmethionine_cycle,_and_Putative_sugar-binding_domain


id: CL:5083
description: Mixed, incl. S-adenosylmethionine cycle, and ABC-type D-ribose transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5083_Mixed,_incl._S-adenosylmethionine_cycle,_and_ABC-type_D-ribose_transporter_activity


id: CL:5106
description: Mixed, incl. Phosphate ion transport, and Ppx/GppA phosphatase
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5106_Mixed,_incl._Phosphate_ion_transport,_and_Ppx/GppA_phosphatase


id: CL:5107
description: Mixed, incl. ABC-type D-ribose transporter activity, and Biotin metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5107_Mixed,_incl._ABC-type_D-ribose_transporter_activity,_and_Biotin_metabolic_process


id: CL:5109
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5109_Mixed,_incl._ABC-type_D-ribose_transporter_activity,_and_Fumarylacetoacetase-like,_C-terminal_domain_superfamily

description:
  Mixed, incl. ABC-type D-ribose transporter activity, and Fumarylacetoacetase-like, C-terminal domain superfamily


id: CL:5143
description: ABC transporters, and Carbohydrate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5143_ABC_transporters,_and_Carbohydrate_metabolic_process


id: CL:5144
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5144_Mixed,_incl._glycerol-3-phosphate_transmembrane_transport,_and_Bacterial_extracellular_solute-binding_protein

description:
  Mixed, incl. glycerol-3-phosphate transmembrane transport, and Bacterial extracellular solute-binding protein


id: CL:5145
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5145_Mixed,_incl._glycerol-3-phosphate_transmembrane_transport,_and_Bacterial_extracellular_solute-binding_protein

description:
  Mixed, incl. glycerol-3-phosphate transmembrane transport, and Bacterial extracellular solute-binding protein


id: CL:5146
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5146_Mixed,_incl._glycerol-3-phosphate_transmembrane_transport,_and_Bacterial_extracellular_solute-binding_protein

description:
  Mixed, incl. glycerol-3-phosphate transmembrane transport, and Bacterial extracellular solute-binding protein


id: CL:5147
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5147_Mixed,_incl._glycerol-3-phosphate_transmembrane_transport,_and_Bacterial_extracellular_solute-binding_protein

description:
[cell repeats an earlier one in this file: 109 characters]


id: CL:5149
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5149_Mixed,_incl._glycerol-3-phosphate_transmembrane_transport,_and_ABC-type_carbohydrate_transporter_activity

description:
  Mixed, incl. glycerol-3-phosphate transmembrane transport, and ABC-type carbohydrate transporter activity


id: CL:515
description: DNA topoisomerase, type IIA-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:515_DNA_topoisomerase,_type_IIA-like_domain_superfamily


id: CL:5150
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5150_Mixed,_incl._glycerol-3-phosphate_transmembrane_transport,_and_ABC-type_carbohydrate_transporter_activity

description:
  Mixed, incl. glycerol-3-phosphate transmembrane transport, and ABC-type carbohydrate transporter activity


id: CL:5151
description: glycerol-3-phosphate transmembrane transport, and ABC-type carbohydrate transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5151_glycerol-3-phosphate_transmembrane_transport,_and_ABC-type_carbohydrate_transporter_activity


id: CL:5153
description: TOBE domain, and ABC-type carbohydrate transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5153_TOBE_domain,_and_ABC-type_carbohydrate_transporter_activity


id: CL:5179
description: Mixed, incl. MalK, OB fold domain, and Bacterial extracellular solute-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5179_Mixed,_incl._MalK,_OB_fold_domain,_and_Bacterial_extracellular_solute-binding_protein


id: CL:5195
description: glycerol-3-phosphate transmembrane transport, and Bacterial extracellular solute-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5195_glycerol-3-phosphate_transmembrane_transport,_and_Bacterial_extracellular_solute-binding_protein


id: CL:5217
description: Mixed, incl. MalK, OB fold domain, and Bacterial extracellular solute-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5217_Mixed,_incl._MalK,_OB_fold_domain,_and_Bacterial_extracellular_solute-binding_protein


id: CL:5228
description: Mixed, incl. Xylulokinase, and Putative sugar-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5228_Mixed,_incl._Xylulokinase,_and_Putative_sugar-binding_domain


id: CL:524
description: Bacterial nucleoid, and MFS transporter superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:524_Bacterial_nucleoid,_and_MFS_transporter_superfamily


id: CL:5241
description: Mixed, incl. Mannitol dehydrogenase, and TOBE domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5241_Mixed,_incl._Mannitol_dehydrogenase,_and_TOBE_domain


id: CL:5252
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5252_Mixed,_incl._Glycoside_hydrolase-type_carbohydrate-binding,_and_ABC-type_glycerol-3-phosphate_transporter_activity

description:
  Mixed, incl. Glycoside hydrolase-type carbohydrate-binding, and ABC-type glycerol-3-phosphate transporter activity


id: CL:5254
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5254_ABC-type_glycerol-3-phosphate_transporter_activity,_and_Bacterial_extracellular_solute-binding_protein

description:
  ABC-type glycerol-3-phosphate transporter activity, and Bacterial extracellular solute-binding protein


id: CL:5271
description: Carbohydrate metabolic process, and ThuA-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5271_Carbohydrate_metabolic_process,_and_ThuA-like_domain


id: CL:5272
description: Mixed, incl. Inositol 2-dehydrogenase activity, and Xylose isomerase-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5272_Mixed,_incl._Inositol_2-dehydrogenase_activity,_and_Xylose_isomerase-like_superfamily


id: CL:5273
description: Mixed, incl. Inositol 2-dehydrogenase activity, and Xylose isomerase-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5273_Mixed,_incl._Inositol_2-dehydrogenase_activity,_and_Xylose_isomerase-like_superfamily


id: CL:5274
description: Mixed, incl. Inositol 2-dehydrogenase activity, and ThuA-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5274_Mixed,_incl._Inositol_2-dehydrogenase_activity,_and_ThuA-like_domain


id: CL:5276
description: ThuA-like domain, and Inositol 2-dehydrogenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5276_ThuA-like_domain,_and_Inositol_2-dehydrogenase_activity


id: CL:5294
description: Other glycan degradation, and Six-hairpin glycosidase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5294_Other_glycan_degradation,_and_Six-hairpin_glycosidase_superfamily


id: CL:5305
description: Biotin metabolism, and Oxidoreductase family, C-terminal alpha/beta domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5305_Biotin_metabolism,_and_Oxidoreductase_family,_C-terminal_alpha/beta_domain


id: CL:5314
description: Mixed, incl. 6-phosphogluconolactonase activity, and GMC oxidoreductase
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5314_Mixed,_incl._6-phosphogluconolactonase_activity,_and_GMC_oxidoreductase


id: CL:5324
description: Mixed, incl. Pentose and glucuronate interconversions, and Peptidase family M20/M25/M40
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5324_Mixed,_incl._Pentose_and_glucuronate_interconversions,_and_Peptidase_family_M20/M25/M40


id: CL:5326
description: Peptidase family M20/M25/M40, and Carbohydrate kinase, FGGY, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5326_Peptidase_family_M20/M25/M40,_and_Carbohydrate_kinase,_FGGY,_N-terminal


id: CL:5341
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5341_Mixed,_incl._Mandelate_racemase/muconate_lactonizing_enzyme,_conserved_site,_and_D-isomer_specific_2-hydroxyacid_dehydrogenase,_NAD-binding_domain_conserved_site

description:
  Mixed, incl. Mandelate racemase/muconate lactonizing enzyme, conserved site, and D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site


id: CL:535
description: Mixed, incl. Helix_turn _helix lactose operon repressor, and Amidase
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:535_Mixed,_incl._Helix_turn__helix_lactose_operon_repressor,_and_Amidase


id: CL:5360
description: Mixed, incl. Quorum sensing, and ABC-type polyamine transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5360_Mixed,_incl._Quorum_sensing,_and_ABC-type_polyamine_transporter_activity


id: CL:5361
description: Quorum sensing, and Amino acid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5361_Quorum_sensing,_and_Amino_acid_transport


id: CL:5363
description: Mixed, incl. Nickel cation transmembrane transporter activity, and Peptide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5363_Mixed,_incl._Nickel_cation_transmembrane_transporter_activity,_and_Peptide_transport


id: CL:5364
description: Mixed, incl. Nickel cation transmembrane transporter activity, and Solute-binding protein family 5
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5364_Mixed,_incl._Nickel_cation_transmembrane_transporter_activity,_and_Solute-binding_protein_family_5


id: CL:5365
description: Mixed, incl. Nickel cation transmembrane transporter activity, and Peptide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5365_Mixed,_incl._Nickel_cation_transmembrane_transporter_activity,_and_Peptide_transport


id: CL:5366
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5366_Nickel_cation_transmembrane_transporter_activity,_and_Oligopeptide/dipeptide_ABC_transporter,_C-terminal

description:
  Nickel cation transmembrane transporter activity, and Oligopeptide/dipeptide ABC transporter, C-terminal


id: CL:5367
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5367_Nickel_cation_transmembrane_transporter_activity,_and_Oligopeptide/dipeptide_ABC_transporter,_C-terminal

description:
  Nickel cation transmembrane transporter activity, and Oligopeptide/dipeptide ABC transporter, C-terminal


id: CL:5368
description: Nickel cation transmembrane transporter activity, and Peptide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5368_Nickel_cation_transmembrane_transporter_activity,_and_Peptide_transport


id: CL:5369
description: Nickel cation transmembrane transporter activity, and Peptide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5369_Nickel_cation_transmembrane_transporter_activity,_and_Peptide_transport


id: CL:537
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:537_Helix_turn__helix_lactose_operon_repressor,_and_Transcriptional_regulator_LacI/GalR-like,_sensor_domain

description:
  Helix_turn _helix lactose operon repressor, and Transcriptional regulator LacI/GalR-like, sensor domain


id: CL:5370
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5370_Oligopeptide/dipeptide_ABC_transporter,_C-terminal,_and_Nickel_cation_transmembrane_transporter_activity

description:
  Oligopeptide/dipeptide ABC transporter, C-terminal, and Nickel cation transmembrane transporter activity


id: CL:5371
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5371_Oligopeptide/dipeptide_transporter,_C-terminal_region,_and_Oligopeptide_transport_permease_C-like,_N-terminal_domain

description:
  Oligopeptide/dipeptide transporter, C-terminal region, and Oligopeptide transport permease C-like, N-terminal domain


id: CL:5380
description: Oligopeptide/dipeptide ABC transporter, C-terminal, and Peptide transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5380_Oligopeptide/dipeptide_ABC_transporter,_C-terminal,_and_Peptide_transmembrane_transporter_activity


id: CL:5389
description: Mixed, incl. Nickel cation transport, and Oligopeptide transport permease C-like, N-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5389_Mixed,_incl._Nickel_cation_transport,_and_Oligopeptide_transport_permease_C-like,_N-terminal_domain


id: CL:5398
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5398_Nickel_cation_transmembrane_transporter_activity,_and_Twin-arginine_translocation_pathway,_signal_sequence,_bacterial/archaeal

description:
  Nickel cation transmembrane transporter activity, and Twin-arginine translocation pathway, signal sequence, bacterial/archaeal


id: CL:540
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:540_Transcriptional_regulator_LacI/GalR-like,_sensor_domain,_and_Periplasmic_binding_protein/LacI_sugar_binding_domain

description:
  Transcriptional regulator LacI/GalR-like, sensor domain, and Periplasmic binding protein/LacI sugar binding domain


id: CL:5408
description: Oligopeptide/dipeptide ABC transporter, C-terminal, and Fluorobenzoate degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5408_Oligopeptide/dipeptide_ABC_transporter,_C-terminal,_and_Fluorobenzoate_degradation


id: CL:5418
description: Mixed, incl. Tryptophan halogenase, and Oligopeptide transport permease C-like, N-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5418_Mixed,_incl._Tryptophan_halogenase,_and_Oligopeptide_transport_permease_C-like,_N-terminal_domain


id: CL:5429
description: Mixed, incl. ANTAR domain, and Periplasmic binding protein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5429_Mixed,_incl._ANTAR_domain,_and_Periplasmic_binding_protein_domain


id: CL:5442
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5442_Peptide_transmembrane_transporter_activity,_and_Oligopeptide_transport_permease_C-like,_N-terminal_domain

description:
  Peptide transmembrane transporter activity, and Oligopeptide transport permease C-like, N-terminal domain


id: CL:5455
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5455_Oligopeptide/dipeptide_ABC_transporter,_C-terminal,_and_Nickel_cation_transmembrane_transporter_activity

description:
  Oligopeptide/dipeptide ABC transporter, C-terminal, and Nickel cation transmembrane transporter activity


id: CL:5473
description: Mixed, incl. Amino acid transport, and Nickel cation binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5473_Mixed,_incl._Amino_acid_transport,_and_Nickel_cation_binding


id: CL:5474
description: Mixed, incl. Nickel cation binding, and Branched-chain amino acid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5474_Mixed,_incl._Nickel_cation_binding,_and_Branched-chain_amino_acid_transport


id: CL:5475
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5475_Mixed,_incl._Branched-chain_amino_acid_transport,_and_Branched-chain_amino_acid_ATP-binding_cassette_transporter,_C-terminal

description:
  Mixed, incl. Branched-chain amino acid transport, and Branched-chain amino acid ATP-binding cassette transporter, C-terminal


id: CL:5476
description: Mixed, incl. Branched-chain amino acid transport, and Amino acid binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5476_Mixed,_incl._Branched-chain_amino_acid_transport,_and_Amino_acid_binding


id: CL:5485
description: Mixed, incl. Periplasmic binding protein domain, and Branched-chain amino acid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5485_Mixed,_incl._Periplasmic_binding_protein_domain,_and_Branched-chain_amino_acid_transport


id: CL:5509
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5509_Mixed,_incl._Ligand-gated_channel_activity,_and_ABC_transporter_membrane_protein_permease_protein_ArtM/GltK/GlnP/TcyL/YhdX-like

description:
  Mixed, incl. Ligand-gated channel activity, and ABC transporter membrane protein permease protein ArtM/GltK/GlnP/TcyL/YhdX-like


id: CL:5510
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5510_Ligand-gated_channel_activity,_and_ABC_transporter_membrane_protein_permease_protein_ArtM/GltK/GlnP/TcyL/YhdX-like

description:
  Ligand-gated channel activity, and ABC transporter membrane protein permease protein ArtM/GltK/GlnP/TcyL/YhdX-like


id: CL:5512
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5512_Ionotropic_glutamate_receptor,_C-terminal,_and_Amino_acid_ABC_transporter,_permease_protein,_3-TM_domain

description:
  Ionotropic glutamate receptor, C-terminal, and Amino acid ABC transporter, permease protein, 3-TM domain


id: CL:5531
description: Mixed, incl. Co-chaperone DjlA, N-terminal, and Cold shock, CspA
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5531_Mixed,_incl._Co-chaperone_DjlA,_N-terminal,_and_Cold_shock,_CspA


id: CL:5541
description: Mixed, incl. Polyamine transport, and MetI-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5541_Mixed,_incl._Polyamine_transport,_and_MetI-like_superfamily


id: CL:5542
description: Mixed, incl. Polyamine transport, and MetI-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5542_Mixed,_incl._Polyamine_transport,_and_MetI-like_superfamily


id: CL:5543
description: Polyamine transport, and MetI-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5543_Polyamine_transport,_and_MetI-like_superfamily


id: CL:5544
description: Polyamine transport, and ABC-type polyamine transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5544_Polyamine_transport,_and_ABC-type_polyamine_transporter_activity


id: CL:5546
description: Polyamine transport, and ABC-type polyamine transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5546_Polyamine_transport,_and_ABC-type_polyamine_transporter_activity


id: CL:5548
description: Polyamine transport, and ABC-type polyamine transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5548_Polyamine_transport,_and_ABC-type_polyamine_transporter_activity


id: CL:5549
description: ABC-type polyamine transporter activity, and Polyamine binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5549_ABC-type_polyamine_transporter_activity,_and_Polyamine_binding


id: CL:5551
description: ABC-type polyamine transporter activity, and Polyamine binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5551_ABC-type_polyamine_transporter_activity,_and_Polyamine_binding


id: CL:5580
description: Polyamine binding, and ABC-type polyamine transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5580_Polyamine_binding,_and_ABC-type_polyamine_transporter_activity


id: CL:5592
description: ABC-type polyamine transporter activity, and Bacterial extracellular solute-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5592_ABC-type_polyamine_transporter_activity,_and_Bacterial_extracellular_solute-binding_protein


id: CL:5606
description: Mixed, incl. PHP domain, and Bacterial extracellular solute-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5606_Mixed,_incl._PHP_domain,_and_Bacterial_extracellular_solute-binding_protein


id: CL:561
description: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity, and aspartate-tRNA ligase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:561_glutaminyl-tRNA_synthase_(glutamine-hydrolyzing)_activity,_and_aspartate-tRNA_ligase_activity


id: CL:5615
description: Mixed, incl. Iron-type alcohol dehydrogenase-like, and Aldehyde dehydrogenase, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5615_Mixed,_incl._Iron-type_alcohol_dehydrogenase-like,_and_Aldehyde_dehydrogenase,_C-terminal


id: CL:5618
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5618_Mixed,_incl._Aldehyde_dehydrogenase_(NAD+)_activity,_and_Spermidine/putrescine-binding_periplasmic_protein

description:
  Mixed, incl. Aldehyde dehydrogenase (NAD+) activity, and Spermidine/putrescine-binding periplasmic protein


id: CL:5631
description: Iron-type alcohol dehydrogenase-like, and Ethanol oxidation
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5631_Iron-type_alcohol_dehydrogenase-like,_and_Ethanol_oxidation


id: CL:5643
description: Molybdenum cofactor biosynthesis, and Molybdate ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5643_Molybdenum_cofactor_biosynthesis,_and_Molybdate_ion_transport


id: CL:5645
description: Molybdenum cofactor biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5645_Molybdenum_cofactor_biosynthesis


id: CL:5663
description: Mixed, incl. Nitrogen metabolism, and Riboflavin metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5663_Mixed,_incl._Nitrogen_metabolism,_and_Riboflavin_metabolism


id: CL:5664
description: Mixed, incl. Nitrogen metabolism, and Alkanesulfonate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5664_Mixed,_incl._Nitrogen_metabolism,_and_Alkanesulfonate_transport


id: CL:5668
description: Alkanesulfonate transport, and Binding-protein-dependent transport system inner membrane component
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5668_Alkanesulfonate_transport,_and_Binding-protein-dependent_transport_system_inner_membrane_component


id: CL:5683
description: Mixed, incl. NMT1-like family, and ANTAR domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5683_Mixed,_incl._NMT1-like_family,_and_ANTAR_domain


id: CL:5701
description: Mixed, incl. Flavin reductase like domain, and Luciferase-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5701_Mixed,_incl._Flavin_reductase_like_domain,_and_Luciferase-like_domain


id: CL:5717
description: Mixed, incl. Oxoprolinase family, and Protein acylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5717_Mixed,_incl._Oxoprolinase_family,_and_Protein_acylation


id: CL:5718
description: Mixed, incl. Oxoprolinase family, and Protein acylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5718_Mixed,_incl._Oxoprolinase_family,_and_Protein_acylation


id: CL:5719
description: Oxoprolinase family, and Peptidyl-lysine acetylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5719_Oxoprolinase_family,_and_Peptidyl-lysine_acetylation


id: CL:5720
description: Mixed, incl. Peptidyl-lysine acetylation, and Methanogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5720_Mixed,_incl._Peptidyl-lysine_acetylation,_and_Methanogenesis


id: CL:573
description: Mixed, incl. tRNA threonylcarbamoyladenosine modification, and PP-loop family
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:573_Mixed,_incl._tRNA_threonylcarbamoyladenosine_modification,_and_PP-loop_family


id: CL:5744
description: Mixed, incl. Peptidyl-serine acetylation, and SpoVT-AbrB domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5744_Mixed,_incl._Peptidyl-serine_acetylation,_and_SpoVT-AbrB_domain_superfamily


id: CL:5755
description: Major Facilitator Superfamily, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5755_Major_Facilitator_Superfamily,_and_Signal


id: CL:5764
description: Mixed, incl. Purine nucleobase metabolic process, and Aldehyde oxidase/xanthine dehydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5764_Mixed,_incl._Purine_nucleobase_metabolic_process,_and_Aldehyde_oxidase/xanthine_dehydrogenase


id: CL:5765
description: Purine nucleobase metabolic process, and Aldehyde oxidase/xanthine dehydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5765_Purine_nucleobase_metabolic_process,_and_Aldehyde_oxidase/xanthine_dehydrogenase


id: CL:5766
description: Mixed, incl. Purine metabolism, and EutQ-like cupin domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5766_Mixed,_incl._Purine_metabolism,_and_EutQ-like_cupin_domain


id: CL:5777
description: Aldehyde oxidase/xanthine dehydrogenase, and Guanine catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5777_Aldehyde_oxidase/xanthine_dehydrogenase,_and_Guanine_catabolic_process


id: CL:5786
description: ABC transporter substrate-binding protein PnrA-like, and ABC transporter, permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5786_ABC_transporter_substrate-binding_protein_PnrA-like,_and_ABC_transporter,_permease


id: CL:5803
description: Mixed, incl. Selenium, and Reactive oxygen species metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5803_Mixed,_incl._Selenium,_and_Reactive_oxygen_species_metabolic_process


id: CL:5819
description: Mostly uncharacterized, incl. DNA metabolic process, and RTX calcium-binding nonapeptide repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5819_Mostly_uncharacterized,_incl._DNA_metabolic_process,_and_RTX_calcium-binding_nonapeptide_repeat


id: CL:5821
description: Mixed, incl. DNA metabolic process, and Nucleic acid phosphodiester bond hydrolysis
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5821_Mixed,_incl._DNA_metabolic_process,_and_Nucleic_acid_phosphodiester_bond_hydrolysis


id: CL:5822
description: Mostly uncharacterized, incl. Nucleic acid phosphodiester bond hydrolysis, and DNA modification
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5822_Mostly_uncharacterized,_incl._Nucleic_acid_phosphodiester_bond_hydrolysis,_and_DNA_modification


id: CL:5823
description: Mostly uncharacterized, incl. Nucleic acid phosphodiester bond hydrolysis, and DNA modification
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5823_Mostly_uncharacterized,_incl._Nucleic_acid_phosphodiester_bond_hydrolysis,_and_DNA_modification


id: CL:5825
description: Mostly uncharacterized, incl. Virion assembly, and Amidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5825_Mostly_uncharacterized,_incl._Virion_assembly,_and_Amidase_activity


id: CL:5827
description: Mostly uncharacterized, incl. Virion assembly, and Amidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5827_Mostly_uncharacterized,_incl._Virion_assembly,_and_Amidase_activity


id: CL:5828
description: Mixed, incl. Virion assembly, and Amidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5828_Mixed,_incl._Virion_assembly,_and_Amidase_activity


id: CL:5829
description: Mixed, incl. Amidase activity, and Phage tail tube protein-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5829_Mixed,_incl._Amidase_activity,_and_Phage_tail_tube_protein-like


id: CL:5830
description: Mixed, incl. Amidase activity, and Phage tail tube protein-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5830_Mixed,_incl._Amidase_activity,_and_Phage_tail_tube_protein-like


id: CL:5832
description: Mixed, incl. Phage tail tube protein-like, and Protein of unknown function DUF6441
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5832_Mixed,_incl._Phage_tail_tube_protein-like,_and_Protein_of_unknown_function_DUF6441


id: CL:5853
description: Mixed, incl. Bacteriophage lambda, GpA-like, and Protein of unknown function DUF3489
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5853_Mixed,_incl._Bacteriophage_lambda,_GpA-like,_and_Protein_of_unknown_function_DUF3489


id: CL:5869
description: Virion assembly, and Major capsid protein GpE
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5869_Virion_assembly,_and_Major_capsid_protein_GpE


id: CL:5880
description: Mixed, incl. Domain of unknown function DUF6362, and Ribonuclease H-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5880_Mixed,_incl._Domain_of_unknown_function_DUF6362,_and_Ribonuclease_H-like_superfamily


id: CL:5882
description: Mixed, incl. AAA domain, and Uncharacterised domain UPF0547
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5882_Mixed,_incl._AAA_domain,_and_Uncharacterised_domain_UPF0547


id: CL:5884
description: Mixed, incl. AAA domain, and Uncharacterised domain UPF0547
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5884_Mixed,_incl._AAA_domain,_and_Uncharacterised_domain_UPF0547


id: CL:591
description: Nucleoside monophosphate metabolic process, and Pyrimidine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:591_Nucleoside_monophosphate_metabolic_process,_and_Pyrimidine_metabolism


id: CL:592
description: Nucleoside monophosphate metabolic process, and Riboflavin metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:592_Nucleoside_monophosphate_metabolic_process,_and_Riboflavin_metabolic_process


id: CL:5925
description: Mixed, incl. His-Me finger superfamily, and Exodeoxyribonuclease V complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5925_Mixed,_incl._His-Me_finger_superfamily,_and_Exodeoxyribonuclease_V_complex


id: CL:5928
description: Mixed, incl. Exodeoxyribonuclease V complex, and TOPRIM domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5928_Mixed,_incl._Exodeoxyribonuclease_V_complex,_and_TOPRIM_domain


id: CL:593
description: Nucleoside monophosphate metabolic process, and Riboflavin metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:593_Nucleoside_monophosphate_metabolic_process,_and_Riboflavin_metabolic_process


id: CL:594
description: Ribonucleoside monophosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:594_Ribonucleoside_monophosphate_biosynthetic_process


id: CL:5947
description: Mixed, incl. Protein adenylylation, and PD-(D/E)XK endonuclease-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5947_Mixed,_incl._Protein_adenylylation,_and_PD-(D/E)XK_endonuclease-like_domain_superfamily


id: CL:5948
description: Mixed, incl. Queuosine metabolic process, and Nucleotide excision repair
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5948_Mixed,_incl._Queuosine_metabolic_process,_and_Nucleotide_excision_repair


id: CL:595
description: De novo IMP biosynthetic process, and GMP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:595_De_novo_IMP_biosynthetic_process,_and_GMP_biosynthetic_process


id: CL:5951
description: Mixed, incl. AAA domain, and Helix-turn-helix domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5951_Mixed,_incl._AAA_domain,_and_Helix-turn-helix_domain


id: CL:597
description: De novo IMP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:597_De_novo_IMP_biosynthetic_process


id: CL:5971
description: Protein adenylylation, and ATPase, dynein-related, AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5971_Protein_adenylylation,_and_ATPase,_dynein-related,_AAA_domain


id: CL:5981
description: Mixed, incl. PIN domain, and Antimicrobial
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5981_Mixed,_incl._PIN_domain,_and_Antimicrobial


id: CL:599
description: De novo IMP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:599_De_novo_IMP_biosynthetic_process


id: CL:5995
description: Mixed, incl. DNA modification, and DNA strand exchange activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5995_Mixed,_incl._DNA_modification,_and_DNA_strand_exchange_activity


id: CL:5996
description: Mixed, incl. DNA modification, and DNA strand exchange activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5996_Mixed,_incl._DNA_modification,_and_DNA_strand_exchange_activity


id: CL:5997
description: DNA strand exchange activity, and DNA modification
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:5997_DNA_strand_exchange_activity,_and_DNA_modification


id: CL:6013
description: DNA strand exchange activity, and DNA integration
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:6013_DNA_strand_exchange_activity,_and_DNA_integration


id: CL:6025
description: Mixed, incl. DNA methylation on cytosine, and Helicase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:6025_Mixed,_incl._DNA_methylation_on_cytosine,_and_Helicase_activity


id: CL:6041
description: Mixed, incl. Protein of unknown function DUF6511, and DNA-directed RNA polymerase
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:6041_Mixed,_incl._Protein_of_unknown_function_DUF6511,_and_DNA-directed_RNA_polymerase


id: CL:6061
description: Mostly uncharacterized, incl. RTX calcium-binding nonapeptide repeat, and Tip attachment protein J
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:6061_Mostly_uncharacterized,_incl._RTX_calcium-binding_nonapeptide_repeat,_and_Tip_attachment_protein_J


id: CL:6062
description: Mostly uncharacterized, incl. RTX calcium-binding nonapeptide repeat, and Tip attachment protein J
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:6062_Mostly_uncharacterized,_incl._RTX_calcium-binding_nonapeptide_repeat,_and_Tip_attachment_protein_J


id: CL:6063
description: Mixed, incl. RTX calcium-binding nonapeptide repeat, and Tip attachment protein J
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:6063_Mixed,_incl._RTX_calcium-binding_nonapeptide_repeat,_and_Tip_attachment_protein_J


id: CL:6066
description: Mixed, incl. GTA TIM-barrel-like domain, and Bacteriophage phiJL001, Gp84
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:6066_Mixed,_incl._GTA_TIM-barrel-like_domain,_and_Bacteriophage_phiJL001,_Gp84


id: CL:6068
description: Mixed, incl. GTA TIM-barrel-like domain, and Bacteriophage phiJL001, Gp84
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:6068_Mixed,_incl._GTA_TIM-barrel-like_domain,_and_Bacteriophage_phiJL001,_Gp84


id: CL:6071
description: Mixed, incl. GTA TIM-barrel-like domain, and Bacteriophage phiJL001, Gp84
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:6071_Mixed,_incl._GTA_TIM-barrel-like_domain,_and_Bacteriophage_phiJL001,_Gp84


id: CL:6075
description: Mixed, incl. Pentose and glucuronate interconversions, and Proteolysis
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:6075_Mixed,_incl._Pentose_and_glucuronate_interconversions,_and_Proteolysis


id: CL:6112
description: Amidase activity, and Coiled coil
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:6112_Amidase_activity,_and_Coiled_coil


id: CL:6127
description: Mixed, incl. RTX calcium-binding nonapeptide repeat, and Biosynthesis of unsaturated fatty acids
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:6127_Mixed,_incl._RTX_calcium-binding_nonapeptide_repeat,_and_Biosynthesis_of_unsaturated_fatty_acids


id: CL:6128
description: Mixed, incl. RTX calcium-binding nonapeptide repeat, and Biosynthesis of unsaturated fatty acids
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:6128_Mixed,_incl._RTX_calcium-binding_nonapeptide_repeat,_and_Biosynthesis_of_unsaturated_fatty_acids


id: CL:6130
description: RTX calcium-binding nonapeptide repeat, and Peptidase, metallopeptidase
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:6130_RTX_calcium-binding_nonapeptide_repeat,_and_Peptidase,_metallopeptidase


id: CL:6151
description: Mixed, incl. SGNH hydrolase superfamily, and Cell division
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:6151_Mixed,_incl._SGNH_hydrolase_superfamily,_and_Cell_division


id: CL:6165
description: Mixed, incl. KduI/IolB family, and Six-hairpin glycosidase-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:6165_Mixed,_incl._KduI/IolB_family,_and_Six-hairpin_glycosidase-like_superfamily


id: CL:6184
description: Mixed, incl. DoxX, and Transcription regulator LuxR, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:6184_Mixed,_incl._DoxX,_and_Transcription_regulator_LuxR,_C-terminal


id: CL:6198
description: Mixed, incl. Response to virus, and DNA metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:6198_Mixed,_incl._Response_to_virus,_and_DNA_metabolic_process


id: CL:6199
description: Mixed, incl. Transposase activity, and DNA integration
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:6199_Mixed,_incl._Transposase_activity,_and_DNA_integration


id: CL:6200
description: Mixed, incl. Transposase activity, and DDE transposase sub-family
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:6200_Mixed,_incl._Transposase_activity,_and_DDE_transposase_sub-family


id: CL:6201
description: Mixed, incl. Helicase superfamily c-terminal domain, and 5-formyltetrahydrofolate cyclo-ligase
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:6201_Mixed,_incl._Helicase_superfamily_c-terminal_domain,_and_5-formyltetrahydrofolate_cyclo-ligase


id: CL:6202
description: Mixed, incl. 5-formyltetrahydrofolate cyclo-ligase, and Bacterial regulatory proteins, gntR family
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:6202_Mixed,_incl._5-formyltetrahydrofolate_cyclo-ligase,_and_Bacterial_regulatory_proteins,_gntR_family


id: CL:6216
description: Mixed, incl. MrfA-like Zn-binding domain, and Chromatin remodeling
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:6216_Mixed,_incl._MrfA-like_Zn-binding_domain,_and_Chromatin_remodeling


id: CL:6228
description: Putative transposase IS4/IS5 family, and DDE transposase sub-family
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:6228_Putative_transposase_IS4/IS5_family,_and_DDE_transposase_sub-family


id: CL:6242
description: Mixed, incl. Endodeoxyribonuclease activity, producing 5-phosphomonoesters, and NYN domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:6242_Mixed,_incl._Endodeoxyribonuclease_activity,_producing_5-phosphomonoesters,_and_NYN_domain


id: CL:6245
description: Endodeoxyribonuclease activity, producing 5-phosphomonoesters, and NYN domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:6245_Endodeoxyribonuclease_activity,_producing_5-phosphomonoesters,_and_NYN_domain


id: CL:6256
description: Mixed, incl. Enzyme inhibitor activity, and Pfam phage integrase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:6256_Mixed,_incl._Enzyme_inhibitor_activity,_and_Pfam_phage_integrase_family


id: CL:6268
description: Mixed, incl. Response to virus, and Nucleotide-excision repair
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:6268_Mixed,_incl._Response_to_virus,_and_Nucleotide-excision_repair


id: CL:6269
description: Mixed, incl. Response to virus, and Nucleotide-excision repair
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:6269_Mixed,_incl._Response_to_virus,_and_Nucleotide-excision_repair


id: CL:6270
description: Mixed, incl. Nucleotide-excision repair, and Infection with Mycobacterium tuberculosis
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:6270_Mixed,_incl._Nucleotide-excision_repair,_and_Infection_with_Mycobacterium_tuberculosis


id: CL:6271
description: Nucleotide-excision repair, and Coiled coil
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:6271_Nucleotide-excision_repair,_and_Coiled_coil


id: CL:6280
description: Mixed, incl. Infection with Mycobacterium tuberculosis
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:6280_Mixed,_incl._Infection_with_Mycobacterium_tuberculosis


id: CL:6290
description: RAMP superfamily, and Response to virus
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:6290_RAMP_superfamily,_and_Response_to_virus


id: CL:630
description: De novo UMP biosynthetic process, and Amidohydrolase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:630_De_novo_UMP_biosynthetic_process,_and_Amidohydrolase_family


id: CL:6303
description: CRISPR-cas system, and Maintenance of DNA repeat elements
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:6303_CRISPR-cas_system,_and_Maintenance_of_DNA_repeat_elements


id: CL:6324
description: Mixed, incl. Proteasome subunit, and Transglutaminase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:6324_Mixed,_incl._Proteasome_subunit,_and_Transglutaminase-like


id: CL:633
description: Carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity, and Dihydroorotase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:633_Carbamoyl-phosphate_synthase_(glutamine-hydrolyzing)_activity,_and_Dihydroorotase_activity


id: CL:6341
description: DDE transposase retroviral integrase sub-family, and Transposase
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:6341_DDE_transposase_retroviral_integrase_sub-family,_and_Transposase


id: CL:6377
description: Mostly uncharacterized, incl. Peptidoglycan turnover
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:6377_Mostly_uncharacterized,_incl._Peptidoglycan_turnover


id: CL:653
description: Riboflavin metabolic process, and Nucleobase-containing compound kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:653_Riboflavin_metabolic_process,_and_Nucleobase-containing_compound_kinase_activity


id: CL:655
description: Nucleobase-containing compound kinase activity, and Ribonucleoside-diphosphate reductase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:655_Nucleobase-containing_compound_kinase_activity,_and_Ribonucleoside-diphosphate_reductase_activity


id: CL:690
description: Mixed, incl. Lysin motif, and Toxin metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:690_Mixed,_incl._Lysin_motif,_and_Toxin_metabolic_process


id: CL:701
description: Mixed, incl. Cellular metabolic compound salvage, and Deaminase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:701_Mixed,_incl._Cellular_metabolic_compound_salvage,_and_Deaminase_activity


id: CL:703
description: Mixed, incl. Cellular metabolic compound salvage, and Pyrimidine nucleoside metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:703_Mixed,_incl._Cellular_metabolic_compound_salvage,_and_Pyrimidine_nucleoside_metabolic_process


id: CL:705
description: Mixed, incl. Pyrimidine nucleoside metabolic process, and Deoxyribonucleotide catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:705_Mixed,_incl._Pyrimidine_nucleoside_metabolic_process,_and_Deoxyribonucleotide_catabolic_process


id: CL:721
description: Purine salvage, and Ribokinase/fructokinase
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:721_Purine_salvage,_and_Ribokinase/fructokinase


id: CL:746
description: Mixed, incl. Quinone metabolic process, and Isoprenoid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:746_Mixed,_incl._Quinone_metabolic_process,_and_Isoprenoid_metabolic_process


id: CL:747
description: Mixed, incl. Isoprenoid metabolic process, and Quinone metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:747_Mixed,_incl._Isoprenoid_metabolic_process,_and_Quinone_metabolic_process


id: CL:748
description: Mixed, incl. Isoprenoid metabolic process, and Phosphatidate cytidylyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:748_Mixed,_incl._Isoprenoid_metabolic_process,_and_Phosphatidate_cytidylyltransferase_activity


id: CL:749
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:749_Mixed,_incl._Phosphatidate_cytidylyltransferase_activity,_and_Peptidase_M50,_putative_membrane-associated_zinc_metallopeptidase

description:
  Mixed, incl. Phosphatidate cytidylyltransferase activity, and Peptidase M50, putative membrane-associated zinc metallopeptidase


id: CL:753
description: Phosphatidate cytidylyltransferase activity, and Ribosomal large subunit binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:753_Phosphatidate_cytidylyltransferase_activity,_and_Ribosomal_large_subunit_binding


id: CL:768
description: Isoprene biosynthesis, and Isoprenoid synthase domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:768_Isoprene_biosynthesis,_and_Isoprenoid_synthase_domain_superfamily


id: CL:778
description: Isoprenoid synthase domain superfamily, and Prenyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:778_Isoprenoid_synthase_domain_superfamily,_and_Prenyltransferase_activity


id: CL:787
description: Quinone metabolic process, and 50S ribosomal protein L30e-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:787_Quinone_metabolic_process,_and_50S_ribosomal_protein_L30e-like


id: CL:810
description: Mixed, incl. YjgF/YER057c/UK114 family, and Menaquinone metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:810_Mixed,_incl._YjgF/YER057c/UK114_family,_and_Menaquinone_metabolic_process


id: CL:821
description: Mixed, incl. Chaperone, and Protein catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:821_Mixed,_incl._Chaperone,_and_Protein_catabolic_process


id: CL:822
description: Mixed, incl. Chaperone, and Protein catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:822_Mixed,_incl._Chaperone,_and_Protein_catabolic_process


id: CL:823
description: Mixed, incl. Chaperone, and Protein catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:823_Mixed,_incl._Chaperone,_and_Protein_catabolic_process


id: CL:825
description: Chaperone, and HSP20-like chaperone
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:825_Chaperone,_and_HSP20-like_chaperone


id: CL:830
description: Protein folding chaperone, and ATPase regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:830_Protein_folding_chaperone,_and_ATPase_regulator_activity


id: CL:863
description: Mixed, incl. Phosphate-starvation-induced PsiE-like, and Metalloprotease
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:863_Mixed,_incl._Phosphate-starvation-induced_PsiE-like,_and_Metalloprotease


id: CL:865
description: Phosphate-starvation-induced PsiE-like, and Peptidase M41
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:865_Phosphate-starvation-induced_PsiE-like,_and_Peptidase_M41


id: CL:87
description: Gene expression, and Hydrogen ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:87_Gene_expression,_and_Hydrogen_ion_transport


id: CL:879
description: Mixed, incl. Thioredoxin, and Clp protease
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:879_Mixed,_incl._Thioredoxin,_and_Clp_protease


id: CL:89
description: Translation, and RNA metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:89_Translation,_and_RNA_metabolic_process


id: CL:892
description: Mixed, incl. NUDIX hydrolase, conserved site, and YjeF N-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:892_Mixed,_incl._NUDIX_hydrolase,_conserved_site,_and_YjeF_N-terminal_domain


id: CL:894
description: RNA 3-end processing, and NUDIX hydrolase, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:894_RNA_3-end_processing,_and_NUDIX_hydrolase,_conserved_site


id: CL:906
description: Mixed, incl. YjeF N-terminal domain, and ubiE/COQ5 methyltransferase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:906_Mixed,_incl._YjeF_N-terminal_domain,_and_ubiE/COQ5_methyltransferase_family


id: CL:91
description: Translation, and RNA metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:91_Translation,_and_RNA_metabolic_process


id: CL:917
description: Mixed, incl. Band 7 domain, and PDZ domain 6
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:917_Mixed,_incl._Band_7_domain,_and_PDZ_domain_6


id: CL:919
description: Band 7 domain, and Peptidase M41
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:919_Band_7_domain,_and_Peptidase_M41


id: CL:92
description: Translation, and Hydrogen ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:92_Translation,_and_Hydrogen_ion_transport


id: CL:93
description: Translation, and Hydrogen ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:93_Translation,_and_Hydrogen_ion_transport


id: CL:939
description: Mixed, incl. DNA binding HTH domain, AraC-type, and RNA polymerase sigma-70
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:939_Mixed,_incl._DNA_binding_HTH_domain,_AraC-type,_and_RNA_polymerase_sigma-70


id: CL:94
description: Translation, and Hydrogen ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:94_Translation,_and_Hydrogen_ion_transport


id: CL:941
description: RNA polymerase sigma-70, and CarD-like/TRCF domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:941_RNA_polymerase_sigma-70,_and_CarD-like/TRCF_domain


id: CL:969
description: Mixed, incl. Methylthiotransferase activity, and rRNA catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:969_Mixed,_incl._Methylthiotransferase_activity,_and_rRNA_catabolic_process


id: CL:98
description: Structural constituent of ribosome, and Regulation of translation
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:98_Structural_constituent_of_ribosome,_and_Regulation_of_translation


id: CL:986
description: Mixed, incl. Cytochrome complex assembly, and Glutathione metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:986_Mixed,_incl._Cytochrome_complex_assembly,_and_Glutathione_metabolic_process


id: CL:988
description: Glutathione metabolic process, and AhpC/TSA family
name:
  Local Network Cluster (STRING).STRING_v12.0_1123069_STRINGid_CL:988_Glutathione_metabolic_process,_and_AhpC/TSA_family


id: GO:0000462
description: Maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
memo: https://amigo.geneontology.org/amigo/term/GO:0000462
golevel: 7
name:
  GOBP.STRING_v12.0_1123069_STRINGid_GO:0000462_Maturation_of_SSU-rRNA_from_tricistronic_rRNA_transcript_(SSU-rRNA,_5.8S_rRNA,_LSU-rRNA)


id: GO:0000701
description: Purine-specific mismatch base pair DNA N-glycosylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0000701
golevel: 6
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0000701_Purine-specific_mismatch_base_pair_DNA_N-glycosylase_activity


id: GO:0000716
description: Transcription-coupled nucleotide-excision repair, DNA damage recognition
memo: https://amigo.geneontology.org/amigo/term/GO:0000716
golevel: 7
name:
  GOBP.STRING_v12.0_1123069_STRINGid_GO:0000716_Transcription-coupled_nucleotide-excision_repair,_DNA_damage_recognition


id: GO:0000820
description: Regulation of glutamine family amino acid metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0000820
name:
  GOBP.STRING_v12.0_1123069_STRINGid_GO:0000820_Regulation_of_glutamine_family_amino_acid_metabolic_process


id: GO:0001073
description: Transcription antitermination factor activity, DNA binding
memo: https://amigo.geneontology.org/amigo/term/GO:0001073
golevel: 2
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0001073_Transcription_antitermination_factor_activity,_DNA_binding


id: GO:0003825
description: Alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003825
golevel: 6
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0003825_Alpha,alpha-trehalose-phosphate_synthase_(UDP-forming)_activity


id: GO:0003864
description: 3-methyl-2-oxobutanoate hydroxymethyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003864
golevel: 5
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0003864_3-methyl-2-oxobutanoate_hydroxymethyltransferase_activity


id: GO:0003906
description: DNA-(apurinic or apyrimidinic site) endonuclease activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003906
golevel: 6
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0003906_DNA-(apurinic_or_apyrimidinic_site)_endonuclease_activity


id: GO:0003908
description: methylated-DNA-[protein]-cysteine S-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003908
golevel: 4
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0003908_methylated-DNA-[protein]-cysteine_S-methyltransferase_activity


id: GO:0003917
description: DNA topoisomerase type I (single strand cut, ATP-independent) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003917
golevel: 5
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0003917_DNA_topoisomerase_type_I_(single_strand_cut,_ATP-independent)_activity


id: GO:0003918
description: DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003918
golevel: 3
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0003918_DNA_topoisomerase_type_II_(double_strand_cut,_ATP-hydrolyzing)_activity


id: GO:0003949
memo: https://amigo.geneontology.org/amigo/term/GO:0003949
golevel: 5
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0003949_1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide_isomerase_activity

description:
  1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity


id: GO:0003961
description: O-acetylhomoserine aminocarboxypropyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003961
golevel: 4
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0003961_O-acetylhomoserine_aminocarboxypropyltransferase_activity


id: GO:0003992
description: N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003992
golevel: 5
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0003992_N2-acetyl-L-ornithine:2-oxoglutarate_5-aminotransferase_activity


id: GO:0004018
description: N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004018
golevel: 5
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0004018_N6-(1,2-dicarboxyethyl)AMP_AMP-lyase_(fumarate-forming)_activity


id: GO:0004088
description: Carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004088
golevel: 5
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0004088_Carbamoyl-phosphate_synthase_(glutamine-hydrolyzing)_activity


id: GO:0004174
description: Electron-transferring-flavoprotein dehydrogenase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004174
golevel: 2
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0004174_Electron-transferring-flavoprotein_dehydrogenase_activity


id: GO:0004317
description: 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004317
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0004317_3-hydroxypalmitoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0004318
description: Enoyl-[acyl-carrier-protein] reductase (NADH) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004318
golevel: 6
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0004318_Enoyl-[acyl-carrier-protein]_reductase_(NADH)_activity


id: GO:0004360
description: glutamine-fructose-6-phosphate transaminase (isomerizing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004360
golevel: 6
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0004360_glutamine-fructose-6-phosphate_transaminase_(isomerizing)_activity


id: GO:0004471
description: Malate dehydrogenase (decarboxylating) (NAD+) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004471
golevel: 5
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0004471_Malate_dehydrogenase_(decarboxylating)_(NAD+)_activity


id: GO:0004486
description: Methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004486
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0004486_Methylenetetrahydrofolate_dehydrogenase_[NAD(P)+]_activity


id: GO:0004488
description: Methylenetetrahydrofolate dehydrogenase (NADP+) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004488
golevel: 5
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0004488_Methylenetetrahydrofolate_dehydrogenase_(NADP+)_activity


id: GO:0004489
description: Methylenetetrahydrofolate reductase (NAD(P)H) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004489
golevel: 5
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0004489_Methylenetetrahydrofolate_reductase_(NAD(P)H)_activity


id: GO:0004514
description: Nicotinate-nucleotide diphosphorylase (carboxylating) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004514
golevel: 5
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0004514_Nicotinate-nucleotide_diphosphorylase_(carboxylating)_activity


id: GO:0004591
description: Oxoglutarate dehydrogenase (succinyl-transferring) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004591
golevel: 5
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0004591_Oxoglutarate_dehydrogenase_(succinyl-transferring)_activity


id: GO:0004604
description: Phosphoadenylyl-sulfate reductase (thioredoxin) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004604
golevel: 5
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0004604_Phosphoadenylyl-sulfate_reductase_(thioredoxin)_activity


id: GO:0004616
description: Phosphogluconate dehydrogenase (decarboxylating) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004616
golevel: 5
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0004616_Phosphogluconate_dehydrogenase_(decarboxylating)_activity


id: GO:0004639
description: Phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004639
golevel: 5
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0004639_Phosphoribosylaminoimidazolesuccinocarboxamide_synthase_activity


id: GO:0004641
description: Phosphoribosylformylglycinamidine cyclo-ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004641
golevel: 5
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0004641_Phosphoribosylformylglycinamidine_cyclo-ligase_activity


id: GO:0004643
description: Phosphoribosylaminoimidazolecarboxamide formyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004643
golevel: 5
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0004643_Phosphoribosylaminoimidazolecarboxamide_formyltransferase_activity


id: GO:0004648
description: O-phospho-L-serine:2-oxoglutarate aminotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004648
golevel: 5
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0004648_O-phospho-L-serine:2-oxoglutarate_aminotransferase_activity


id: GO:0004719
description: protein-L-isoaspartate (D-aspartate) O-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004719
golevel: 5
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0004719_protein-L-isoaspartate_(D-aspartate)_O-methyltransferase_activity


id: GO:0004748
description: Ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0004748
golevel: 6
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0004748_Ribonucleoside-diphosphate_reductase_activity,_thioredoxin_disulfide_as_acceptor


id: GO:0005315
description: Inorganic phosphate transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0005315
golevel: 5
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0005315_Inorganic_phosphate_transmembrane_transporter_activity


id: GO:0006515
description: Protein quality control for misfolded or incompletely synthesized proteins
memo: https://amigo.geneontology.org/amigo/term/GO:0006515
golevel: 7
name:
  GOBP.STRING_v12.0_1123069_STRINGid_GO:0006515_Protein_quality_control_for_misfolded_or_incompletely_synthesized_proteins


id: GO:0006614
description: SRP-dependent cotranslational protein targeting to membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0006614
golevel: 6
name:
  GOBP.STRING_v12.0_1123069_STRINGid_GO:0006614_SRP-dependent_cotranslational_protein_targeting_to_membrane


id: GO:0008028
description: Monocarboxylic acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008028
golevel: 4
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0008028_Monocarboxylic_acid_transmembrane_transporter_activity


id: GO:0008124
description: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008124
golevel: 5
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0008124_4-alpha-hydroxytetrahydrobiopterin_dehydratase_activity


id: GO:0008271
description: Secondary active sulfate transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008271
golevel: 5
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0008271_Secondary_active_sulfate_transmembrane_transporter_activity


id: GO:0008425
description: 2-polyprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008425
golevel: 6
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0008425_2-polyprenyl-6-methoxy-1,4-benzoquinone_methyltransferase_activity


id: GO:0008534
description: Oxidized purine nucleobase lesion DNA N-glycosylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008534
golevel: 6
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0008534_Oxidized_purine_nucleobase_lesion_DNA_N-glycosylase_activity


id: GO:0008657
description: DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) inhibitor activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008657
golevel: 4
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0008657_DNA_topoisomerase_type_II_(double_strand_cut,_ATP-hydrolyzing)_inhibitor_activity


id: GO:0008659
description: (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008659
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0008659_(3R)-hydroxymyristoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0008666
description: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008666
golevel: 7
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0008666_2,3,4,5-tetrahydropyridine-2,6-dicarboxylate_N-succinyltransferase_activity


id: GO:0008674
description: 2-dehydro-3-deoxy-6-phosphogalactonate aldolase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008674
golevel: 5
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0008674_2-dehydro-3-deoxy-6-phosphogalactonate_aldolase_activity


id: GO:0008685
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008685
golevel: 4
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0008685_2-C-methyl-D-erythritol_2,4-cyclodiphosphate_synthase_activity


id: GO:0008686
description: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008686
golevel: 4
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0008686_3,4-dihydroxy-2-butanone-4-phosphate_synthase_activity


id: GO:0008690
description: 3-deoxy-manno-octulosonate cytidylyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008690
golevel: 6
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0008690_3-deoxy-manno-octulosonate_cytidylyltransferase_activity


id: GO:0008693
description: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008693
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0008693_3-hydroxydecanoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0008697
description: 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008697
golevel: 5
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0008697_4-deoxy-L-threo-5-hexosulose-uronate_ketol-isomerase_activity


id: GO:0008703
description: 5-amino-6-(5-phosphoribosylamino)uracil reductase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008703
golevel: 5
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0008703_5-amino-6-(5-phosphoribosylamino)uracil_reductase_activity


id: GO:0008757
description: S-adenosylmethionine-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008757
golevel: 5
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0008757_S-adenosylmethionine-dependent_methyltransferase_activity


id: GO:0008759
description: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008759
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0008759_UDP-3-O-[3-hydroxymyristoyl]_N-acetylglucosamine_deacetylase_activity


id: GO:0008760
description: UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008760
golevel: 4
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0008760_UDP-N-acetylglucosamine_1-carboxyvinyltransferase_activity


id: GO:0008764
description: UDP-N-acetylmuramoylalanine-D-glutamate ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008764
golevel: 5
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0008764_UDP-N-acetylmuramoylalanine-D-glutamate_ligase_activity


id: GO:0008765
description: UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008765
golevel: 5
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0008765_UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate_ligase_activity


id: GO:0008766
description: UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008766
golevel: 5
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0008766_UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine_ligase_activity


id: GO:0008780
description: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008780
golevel: 6
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0008780_acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine_O-acyltransferase_activity


id: GO:0008793
description: aromatic-amino-acid:2-oxoglutarate aminotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008793
golevel: 5
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0008793_aromatic-amino-acid:2-oxoglutarate_aminotransferase_activity


id: GO:0008817
description: cob(I)yrinic acid a,c-diamide adenosyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008817
golevel: 4
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0008817_cob(I)yrinic_acid_a,c-diamide_adenosyltransferase_activity


id: GO:0008825
description: Cyclopropane-fatty-acyl-phospholipid synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008825
golevel: 6
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0008825_Cyclopropane-fatty-acyl-phospholipid_synthase_activity


id: GO:0008835
description: Diaminohydroxyphosphoribosylaminopyrimidine deaminase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008835
golevel: 5
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0008835_Diaminohydroxyphosphoribosylaminopyrimidine_deaminase_activity


id: GO:0008882
description: [Glutamate-ammonia-ligase] adenylyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008882
golevel: 6
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0008882_[Glutamate-ammonia-ligase]_adenylyltransferase_activity


id: GO:0008939
description: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008939
golevel: 5
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0008939_Nicotinate-nucleotide-dimethylbenzimidazole_phosphoribosyltransferase_activity


id: GO:0008961
description: Phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008961
golevel: 3
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0008961_Phosphatidylglycerol-prolipoprotein_diacylglyceryl_transferase_activity


id: GO:0008963
description: phospho-N-acetylmuramoyl-pentapeptide-transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008963
golevel: 5
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0008963_phospho-N-acetylmuramoyl-pentapeptide-transferase_activity


id: GO:0008965
description: Phosphoenolpyruvate-protein phosphotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008965
golevel: 5
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0008965_Phosphoenolpyruvate-protein_phosphotransferase_activity


id: GO:0008982
description: protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008982
golevel: 4
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0008982_protein-N(PI)-phosphohistidine-sugar_phosphotransferase_activity


id: GO:0009007
description: Site-specific DNA-methyltransferase (adenine-specific) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0009007
golevel: 5
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0009007_Site-specific_DNA-methyltransferase_(adenine-specific)_activity


id: GO:0009095
description: Aromatic amino acid family biosynthetic process, prephenate pathway
memo: https://amigo.geneontology.org/amigo/term/GO:0009095
golevel: 7
name:
  GOBP.STRING_v12.0_1123069_STRINGid_GO:0009095_Aromatic_amino_acid_family_biosynthetic_process,_prephenate_pathway


id: GO:0009130
description: Pyrimidine nucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009130
golevel: 7
name:
  GOBP.STRING_v12.0_1123069_STRINGid_GO:0009130_Pyrimidine_nucleoside_monophosphate_biosynthetic_process


id: GO:0009139
description: Pyrimidine nucleoside diphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009139
golevel: 7
name:
  GOBP.STRING_v12.0_1123069_STRINGid_GO:0009139_Pyrimidine_nucleoside_diphosphate_biosynthetic_process


id: GO:0009148
description: Pyrimidine nucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009148
golevel: 7
name:
  GOBP.STRING_v12.0_1123069_STRINGid_GO:0009148_Pyrimidine_nucleoside_triphosphate_biosynthetic_process


id: GO:0009157
description: Deoxyribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009157
golevel: 7
name:
  GOBP.STRING_v12.0_1123069_STRINGid_GO:0009157_Deoxyribonucleoside_monophosphate_biosynthetic_process


id: GO:0009168
description: Purine ribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009168
golevel: 8
name:
  GOBP.STRING_v12.0_1123069_STRINGid_GO:0009168_Purine_ribonucleoside_monophosphate_biosynthetic_process


id: GO:0009173
description: Pyrimidine ribonucleoside monophosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009173
golevel: 8
name:
  GOBP.STRING_v12.0_1123069_STRINGid_GO:0009173_Pyrimidine_ribonucleoside_monophosphate_metabolic_process


id: GO:0009174
description: Pyrimidine ribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009174
golevel: 8
name:
  GOBP.STRING_v12.0_1123069_STRINGid_GO:0009174_Pyrimidine_ribonucleoside_monophosphate_biosynthetic_process


id: GO:0009175
description: Pyrimidine ribonucleoside monophosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009175
golevel: 8
name:
  GOBP.STRING_v12.0_1123069_STRINGid_GO:0009175_Pyrimidine_ribonucleoside_monophosphate_catabolic_process


id: GO:0009176
description: Pyrimidine deoxyribonucleoside monophosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009176
golevel: 8
name:
  GOBP.STRING_v12.0_1123069_STRINGid_GO:0009176_Pyrimidine_deoxyribonucleoside_monophosphate_metabolic_process


id: GO:0009177
description: Pyrimidine deoxyribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009177
golevel: 8
name:
  GOBP.STRING_v12.0_1123069_STRINGid_GO:0009177_Pyrimidine_deoxyribonucleoside_monophosphate_biosynthetic_process


id: GO:0009196
description: Pyrimidine deoxyribonucleoside diphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009196
golevel: 8
name:
  GOBP.STRING_v12.0_1123069_STRINGid_GO:0009196_Pyrimidine_deoxyribonucleoside_diphosphate_metabolic_process


id: GO:0009197
description: Pyrimidine deoxyribonucleoside diphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009197
golevel: 8
name:
  GOBP.STRING_v12.0_1123069_STRINGid_GO:0009197_Pyrimidine_deoxyribonucleoside_diphosphate_biosynthetic_process


id: GO:0009206
description: Purine ribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009206
golevel: 8
name:
  GOBP.STRING_v12.0_1123069_STRINGid_GO:0009206_Purine_ribonucleoside_triphosphate_biosynthetic_process


id: GO:0009208
description: Pyrimidine ribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009208
golevel: 8
name:
  GOBP.STRING_v12.0_1123069_STRINGid_GO:0009208_Pyrimidine_ribonucleoside_triphosphate_metabolic_process


id: GO:0009209
description: Pyrimidine ribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009209
golevel: 8
name:
  GOBP.STRING_v12.0_1123069_STRINGid_GO:0009209_Pyrimidine_ribonucleoside_triphosphate_biosynthetic_process


id: GO:0009210
description: Pyrimidine ribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009210
golevel: 8
name:
  GOBP.STRING_v12.0_1123069_STRINGid_GO:0009210_Pyrimidine_ribonucleoside_triphosphate_catabolic_process


id: GO:0009211
description: Pyrimidine deoxyribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009211
golevel: 8
name:
  GOBP.STRING_v12.0_1123069_STRINGid_GO:0009211_Pyrimidine_deoxyribonucleoside_triphosphate_metabolic_process


id: GO:0009212
description: Pyrimidine deoxyribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009212
golevel: 8
name:
  GOBP.STRING_v12.0_1123069_STRINGid_GO:0009212_Pyrimidine_deoxyribonucleoside_triphosphate_biosynthetic_process


id: GO:0009213
description: Pyrimidine deoxyribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009213
golevel: 8
name:
  GOBP.STRING_v12.0_1123069_STRINGid_GO:0009213_Pyrimidine_deoxyribonucleoside_triphosphate_catabolic_process


id: GO:0009215
description: Purine deoxyribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009215
golevel: 8
name:
  GOBP.STRING_v12.0_1123069_STRINGid_GO:0009215_Purine_deoxyribonucleoside_triphosphate_metabolic_process


id: GO:0009217
description: Purine deoxyribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009217
golevel: 8
name:
  GOBP.STRING_v12.0_1123069_STRINGid_GO:0009217_Purine_deoxyribonucleoside_triphosphate_catabolic_process


id: GO:0009401
description: Phosphoenolpyruvate-dependent sugar phosphotransferase system
memo: https://amigo.geneontology.org/amigo/term/GO:0009401
golevel: 5
name:
  GOBP.STRING_v12.0_1123069_STRINGid_GO:0009401_Phosphoenolpyruvate-dependent_sugar_phosphotransferase_system


id: GO:0009427
description: Bacterial-type flagellum basal body, distal rod, L ring
memo: https://amigo.geneontology.org/amigo/term/GO:0009427
golevel: 2
name:
  GOCC.STRING_v12.0_1123069_STRINGid_GO:0009427_Bacterial-type_flagellum_basal_body,_distal_rod,_L_ring


id: GO:0009428
description: Bacterial-type flagellum basal body, distal rod, P ring
memo: https://amigo.geneontology.org/amigo/term/GO:0009428
golevel: 2
name:
  GOCC.STRING_v12.0_1123069_STRINGid_GO:0009428_Bacterial-type_flagellum_basal_body,_distal_rod,_P_ring


id: GO:0009678
description: Pyrophosphate hydrolysis-driven proton transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0009678
golevel: 5
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0009678_Pyrophosphate_hydrolysis-driven_proton_transmembrane_transporter_activity


id: GO:0010557
description: Positive regulation of macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010557
golevel: 7
name:
  GOBP.STRING_v12.0_1123069_STRINGid_GO:0010557_Positive_regulation_of_macromolecule_biosynthetic_process


id: GO:0010558
description: Negative regulation of macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010558
golevel: 7
name:
  GOBP.STRING_v12.0_1123069_STRINGid_GO:0010558_Negative_regulation_of_macromolecule_biosynthetic_process


id: GO:0010604
description: Positive regulation of macromolecule metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010604
golevel: 6
name:
  GOBP.STRING_v12.0_1123069_STRINGid_GO:0010604_Positive_regulation_of_macromolecule_metabolic_process


id: GO:0010605
description: Negative regulation of macromolecule metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010605
golevel: 6
name:
  GOBP.STRING_v12.0_1123069_STRINGid_GO:0010605_Negative_regulation_of_macromolecule_metabolic_process


id: GO:0015169
description: glycerol-3-phosphate transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015169
golevel: 4
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0015169_glycerol-3-phosphate_transmembrane_transporter_activity


id: GO:0015173
description: Aromatic amino acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015173
golevel: 4
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0015173_Aromatic_amino_acid_transmembrane_transporter_activity


id: GO:0015318
description: Inorganic molecular entity transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015318
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0015318_Inorganic_molecular_entity_transmembrane_transporter_activity


id: GO:0015415
description: ATPase-coupled phosphate ion transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015415
golevel: 3
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0015415_ATPase-coupled_phosphate_ion_transmembrane_transporter_activity


id: GO:0015453
description: Oxidoreduction-driven active transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015453
golevel: 5
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0015453_Oxidoreduction-driven_active_transmembrane_transporter_activity


id: GO:0015605
description: Organophosphate ester transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015605
golevel: 3
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0015605_Organophosphate_ester_transmembrane_transporter_activity


id: GO:0015651
description: Quaternary ammonium group transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015651
golevel: 3
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0015651_Quaternary_ammonium_group_transmembrane_transporter_activity


id: GO:0015658
description: Branched-chain amino acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015658
golevel: 4
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0015658_Branched-chain_amino_acid_transmembrane_transporter_activity


id: GO:0015975
description: Energy derivation by oxidation of reduced inorganic compounds
memo: https://amigo.geneontology.org/amigo/term/GO:0015975
golevel: 4
name:
  GOBP.STRING_v12.0_1123069_STRINGid_GO:0015975_Energy_derivation_by_oxidation_of_reduced_inorganic_compounds


id: GO:0016614
description: Oxidoreductase activity, acting on CH-OH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016614
golevel: 3
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0016614_Oxidoreductase_activity,_acting_on_CH-OH_group_of_donors


id: GO:0016616
description: Oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016616
golevel: 4
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0016616_Oxidoreductase_activity,_acting_on_the_CH-OH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016620
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016620
golevel: 4
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0016620_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016624
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016624
golevel: 4
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0016624_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_disulfide_as_acceptor


id: GO:0016627
description: Oxidoreductase activity, acting on the CH-CH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016627
golevel: 3
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0016627_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors


id: GO:0016628
description: Oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016628
golevel: 4
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0016628_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016634
description: Oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016634
golevel: 4
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0016634_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_oxygen_as_acceptor


id: GO:0016635
memo: https://amigo.geneontology.org/amigo/term/GO:0016635
golevel: 4
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0016635_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_quinone_or_related_compound_as_acceptor

description:
  Oxidoreductase activity, acting on the CH-CH group of donors, quinone or related compound as acceptor


id: GO:0016638
description: Oxidoreductase activity, acting on the CH-NH2 group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016638
golevel: 3
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0016638_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors


id: GO:0016639
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016639
golevel: 4
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0016639_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016641
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016641
golevel: 4
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0016641_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_oxygen_as_acceptor


id: GO:0016642
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016642
golevel: 4
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0016642_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_disulfide_as_acceptor


id: GO:0016645
description: Oxidoreductase activity, acting on the CH-NH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016645
golevel: 3
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0016645_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors


id: GO:0016646
description: Oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016646
golevel: 4
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0016646_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016647
description: Oxidoreductase activity, acting on the CH-NH group of donors, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016647
golevel: 4
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0016647_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors,_oxygen_as_acceptor


id: GO:0016649
memo: https://amigo.geneontology.org/amigo/term/GO:0016649
golevel: 4
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0016649_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors,_quinone_or_similar_compound_as_acceptor

description:
  Oxidoreductase activity, acting on the CH-NH group of donors, quinone or similar compound as acceptor


id: GO:0016652
description: Oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016652
golevel: 4
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0016652_Oxidoreductase_activity,_acting_on_NAD(P)H,_NAD(P)_as_acceptor


id: GO:0016653
description: Oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016653
golevel: 4
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0016653_Oxidoreductase_activity,_acting_on_NAD(P)H,_heme_protein_as_acceptor


id: GO:0016655
description: Oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016655
golevel: 4
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0016655_Oxidoreductase_activity,_acting_on_NAD(P)H,_quinone_or_similar_compound_as_acceptor


id: GO:0016661
description: Oxidoreductase activity, acting on other nitrogenous compounds as donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016661
golevel: 3
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0016661_Oxidoreductase_activity,_acting_on_other_nitrogenous_compounds_as_donors


id: GO:0016662
description: Oxidoreductase activity, acting on other nitrogenous compounds as donors, cytochrome as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016662
golevel: 4
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0016662_Oxidoreductase_activity,_acting_on_other_nitrogenous_compounds_as_donors,_cytochrome_as_acceptor


id: GO:0016667
description: Oxidoreductase activity, acting on a sulfur group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016667
golevel: 3
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0016667_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors


id: GO:0016668
description: Oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016668
golevel: 4
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0016668_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_NAD(P)_as_acceptor


id: GO:0016669
description: Oxidoreductase activity, acting on a sulfur group of donors, cytochrome as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016669
golevel: 4
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0016669_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_cytochrome_as_acceptor


id: GO:0016671
description: Oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016671
golevel: 4
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0016671_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_disulfide_as_acceptor


id: GO:0016672
memo: https://amigo.geneontology.org/amigo/term/GO:0016672
golevel: 4
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0016672_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_quinone_or_similar_compound_as_acceptor

description:
  Oxidoreductase activity, acting on a sulfur group of donors, quinone or similar compound as acceptor


id: GO:0016675
description: Oxidoreductase activity, acting on a heme group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016675
golevel: 3
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0016675_Oxidoreductase_activity,_acting_on_a_heme_group_of_donors


id: GO:0016679
description: Oxidoreductase activity, acting on diphenols and related substances as donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016679
golevel: 3
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0016679_Oxidoreductase_activity,_acting_on_diphenols_and_related_substances_as_donors


id: GO:0016682
description: Oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016682
golevel: 4
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0016682_Oxidoreductase_activity,_acting_on_diphenols_and_related_substances_as_donors,_oxygen_as_acceptor


id: GO:0016684
description: Oxidoreductase activity, acting on peroxide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016684
golevel: 3
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0016684_Oxidoreductase_activity,_acting_on_peroxide_as_acceptor


id: GO:0016701
description: Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen
memo: https://amigo.geneontology.org/amigo/term/GO:0016701
golevel: 3
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0016701_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen


id: GO:0016702
memo: https://amigo.geneontology.org/amigo/term/GO:0016702
golevel: 4
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0016702_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen,_incorporation_of_two_atoms_of_oxygen

description:
  Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen


id: GO:0016705
memo: https://amigo.geneontology.org/amigo/term/GO:0016705
golevel: 3
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0016705_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen


id: GO:0016709
memo: https://amigo.geneontology.org/amigo/term/GO:0016709
golevel: 4
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0016709_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen,_NAD(P)H_as_one_donor,_and_incorporation_of_one_atom_of_oxygen

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen


id: GO:0016712
memo: https://amigo.geneontology.org/amigo/term/GO:0016712
golevel: 4
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0016712_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen,_reduced_flavin_or_flavoprotein_as_one_donor,_and_incorporation_of_one_atom_of_oxygen

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen


id: GO:0016713
memo: https://amigo.geneontology.org/amigo/term/GO:0016713
golevel: 4
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0016713_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen,_reduced_iron-sulfur_protein_as_one_donor,_and_incorporation_of_one_atom_of_oxygen

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen


id: GO:0016721
description: Oxidoreductase activity, acting on superoxide radicals as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016721
golevel: 3
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0016721_Oxidoreductase_activity,_acting_on_superoxide_radicals_as_acceptor


id: GO:0016724
description: Oxidoreductase activity, acting on metal ions, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016724
golevel: 4
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0016724_Oxidoreductase_activity,_acting_on_metal_ions,_oxygen_as_acceptor


id: GO:0016726
description: Oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016726
golevel: 4
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0016726_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_NAD_or_NADP_as_acceptor


id: GO:0016728
description: Oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016728
golevel: 4
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0016728_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_disulfide_as_acceptor


id: GO:0016730
description: Oxidoreductase activity, acting on iron-sulfur proteins as donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016730
golevel: 3
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0016730_Oxidoreductase_activity,_acting_on_iron-sulfur_proteins_as_donors


id: GO:0016731
description: Oxidoreductase activity, acting on iron-sulfur proteins as donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016731
golevel: 4
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0016731_Oxidoreductase_activity,_acting_on_iron-sulfur_proteins_as_donors,_NAD_or_NADP_as_acceptor


id: GO:0016742
description: Hydroxymethyl-, formyl- and related transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0016742
golevel: 4
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0016742_Hydroxymethyl-,_formyl-_and_related_transferase_activity


id: GO:0016747
description: Acyltransferase activity, transferring groups other than amino-acyl groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016747
golevel: 4
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0016747_Acyltransferase_activity,_transferring_groups_other_than_amino-acyl_groups


id: GO:0016765
description: Transferase activity, transferring alkyl or aryl (other than methyl) groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016765
golevel: 3
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0016765_Transferase_activity,_transferring_alkyl_or_aryl_(other_than_methyl)_groups


id: GO:0016767
description: Geranylgeranyl-diphosphate geranylgeranyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0016767
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0016767_Geranylgeranyl-diphosphate_geranylgeranyltransferase_activity


id: GO:0016772
description: Transferase activity, transferring phosphorus-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016772
golevel: 3
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0016772_Transferase_activity,_transferring_phosphorus-containing_groups


id: GO:0016773
description: Phosphotransferase activity, alcohol group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016773
golevel: 4
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0016773_Phosphotransferase_activity,_alcohol_group_as_acceptor


id: GO:0016774
description: Phosphotransferase activity, carboxyl group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016774
golevel: 4
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0016774_Phosphotransferase_activity,_carboxyl_group_as_acceptor


id: GO:0016775
description: Phosphotransferase activity, nitrogenous group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016775
golevel: 4
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0016775_Phosphotransferase_activity,_nitrogenous_group_as_acceptor


id: GO:0016776
description: Phosphotransferase activity, phosphate group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016776
golevel: 4
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0016776_Phosphotransferase_activity,_phosphate_group_as_acceptor


id: GO:0016780
description: Phosphotransferase activity, for other substituted phosphate groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016780
golevel: 4
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0016780_Phosphotransferase_activity,_for_other_substituted_phosphate_groups


id: GO:0016782
description: Transferase activity, transferring sulphur-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016782
golevel: 3
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0016782_Transferase_activity,_transferring_sulphur-containing_groups


id: GO:0016796
memo: https://amigo.geneontology.org/amigo/term/GO:0016796
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0016796_Exonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_5-phosphomonoesters

description:
  Exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5-phosphomonoesters


id: GO:0016810
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
memo: https://amigo.geneontology.org/amigo/term/GO:0016810
golevel: 3
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0016810_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds


id: GO:0016811
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
memo: https://amigo.geneontology.org/amigo/term/GO:0016811
golevel: 4
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0016811_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_linear_amides


id: GO:0016812
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
memo: https://amigo.geneontology.org/amigo/term/GO:0016812
golevel: 4
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0016812_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_cyclic_amides


id: GO:0016813
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines
memo: https://amigo.geneontology.org/amigo/term/GO:0016813
golevel: 4
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0016813_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_linear_amidines


id: GO:0016814
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines
memo: https://amigo.geneontology.org/amigo/term/GO:0016814
golevel: 4
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0016814_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_cyclic_amidines


id: GO:0016818
description: Hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
memo: https://amigo.geneontology.org/amigo/term/GO:0016818
golevel: 4
name:
  GOMF.STRING_v12.0_1123069_STRINGid_GO:0016818_Hydrolase_activity,_acting_on_acid_anhydrides,_in_phosphorus-containing_anhydrides


