# geneInfo

ensembl_gene_id: NIES2130_22615
symbol: era
gene_biotype: protein_coding
description:
  GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.


ensembl_gene_id: NIES2130_22640
symbol: OKH56969.1
gene_biotype: protein_coding
description:
  TspO protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_22655
symbol: OKH56972.1
gene_biotype: protein_coding
description:
  Membrane protein insertion efficiency factor YidD; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.


ensembl_gene_id: NIES2130_22685
symbol: NIES2130_22685
gene_biotype: protein_coding
description:
  Short chain dehydrogenase; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_22690
symbol: OKH56865.1
gene_biotype: protein_coding
description:
  Nitrate reductase associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_22705
symbol: OKH56867.1
gene_biotype: protein_coding
description:
  Nitrate reductase catalytic subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.


ensembl_gene_id: NIES2130_22715
symbol: nirA
gene_biotype: protein_coding
description:
  Ferredoxin-dependent assimilatory nitrite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.


ensembl_gene_id: NIES2130_22725
symbol: NIES2130_22725
gene_biotype: protein_coding
description:
  Cytochrome B6; Incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_22755
symbol: panD
gene_biotype: protein_coding
description:
  Aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.


ensembl_gene_id: NIES2130_22760
symbol: ppa
gene_biotype: protein_coding
description:
  Inorganic pyrophosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.


ensembl_gene_id: NIES2130_22775
symbol: OKH56879.1
gene_biotype: protein_coding
description:
  Aspartate ammonia-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_22780
symbol: OKH56922.1
gene_biotype: protein_coding
description:
  CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: NIES2130_22785
symbol: OKH56923.1
gene_biotype: protein_coding
description:
  Gluconolaconase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_22790
symbol: OKH56880.1
gene_biotype: protein_coding
description:
  3-beta hydroxysteroid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_22800
symbol: OKH56881.1
gene_biotype: protein_coding
description:
  Galactosyl-1-phosphate transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_22805
symbol: gmd
gene_biotype: protein_coding
description:
  GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.


ensembl_gene_id: NIES2130_22810
symbol: fcl
gene_biotype: protein_coding
description:
  GDP-fucose synthetase; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction.


ensembl_gene_id: NIES2130_22820
symbol: OKH56885.1
gene_biotype: protein_coding
description:
  5-formyltetrahydrofolate cyclo-ligase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.


ensembl_gene_id: NIES2130_22835
symbol: OKH56888.1
gene_biotype: protein_coding
description:
  Peptidase U32; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_22845
symbol: OKH56890.1
gene_biotype: protein_coding
description:
  NGG1p interacting factor NIF3; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_22875
symbol: NIES2130_22875
gene_biotype: protein_coding
description:
  HNH endonuclease; Incomplete; partial in the middle of a contig; missing start and stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_22890
symbol: OKH56896.1
gene_biotype: protein_coding
description:
  TIGR00303 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0284 family.


ensembl_gene_id: NIES2130_22915
symbol: glmM
gene_biotype: protein_coding
description:
  Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.


ensembl_gene_id: NIES2130_22945
symbol: OKH56907.1
gene_biotype: protein_coding
description:
  Peroxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_22970
symbol: argG
gene_biotype: protein_coding
description:
  Argininosuccinate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the argininosuccinate synthase family. Type 1 subfamily.


ensembl_gene_id: NIES2130_22990
symbol: rpsB
gene_biotype: protein_coding
description:
  30S ribosomal protein S2; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS2 family.


ensembl_gene_id: NIES2130_22995
symbol: tsf
gene_biotype: protein_coding
description:
  Translation elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.


ensembl_gene_id: NIES2130_23010
symbol: uvrB
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate  [...]


ensembl_gene_id: NIES2130_23055
symbol: OKH56814.1
gene_biotype: protein_coding
description:
  Ribulose-phosphate 3-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ribulose-phosphate 3-epimerase family.


ensembl_gene_id: NIES2130_23065
symbol: OKH56859.1
gene_biotype: protein_coding
description:
  Proteinase inhibitor I4 serpin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the serpin family.


ensembl_gene_id: NIES2130_23095
symbol: frr
gene_biotype: protein_coding
description:
  Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.


ensembl_gene_id: NIES2130_23100
symbol: OKH56821.1
gene_biotype: protein_coding
description:
  NAD-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_23125
symbol: OKH56826.1
gene_biotype: protein_coding
description:
  Part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_23130
symbol: OKH56827.1
gene_biotype: protein_coding
description:
  Tol biopolymer transporter periplasmic protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_23145
symbol: psbX
gene_biotype: protein_coding
description:
  Photosystem II reaction center X protein; Involved in the binding and/or turnover of quinones at the Q(B) site of Photosystem II.


ensembl_gene_id: NIES2130_23155
symbol: OKH56831.1
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase biotin carboxylase subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: NIES2130_23165
symbol: OKH56832.1
gene_biotype: protein_coding
description:
  Chorismate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_23210
symbol: OKH56840.1
gene_biotype: protein_coding
description:
  Methyl-accepting chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_23230
symbol: tilS
gene_biotype: protein_coding
description:
  tRNA lysidine(34) synthetase TilS; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.


ensembl_gene_id: NIES2130_23265
symbol: cutA
gene_biotype: protein_coding
description:
  Divalent-cation tolerance protein CutA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_23270
symbol: plsY
gene_biotype: protein_coding
description:
  Acyl-phosphate glycerol 3-phosphate acyltransferase; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.


ensembl_gene_id: NIES2130_23280
symbol: OKH56850.1
gene_biotype: protein_coding
description:
  Glycerol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_23285
symbol: OKH56851.1
gene_biotype: protein_coding
description:
  ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MlaE permease family.


ensembl_gene_id: NIES2130_23295
symbol: OKH56853.1
gene_biotype: protein_coding
description:
  S49 family peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_23300
symbol: OKH56854.1
gene_biotype: protein_coding
description:
  Chorismate mutase; Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis.


ensembl_gene_id: NIES2130_23310
symbol: NIES2130_23310
gene_biotype: protein_coding
description:
  Phosphate ABC transporter substrate-binding protein; Incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_23315
symbol: OKH56856.1
gene_biotype: protein_coding
description:
  Pyruvate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pyruvate kinase family.


ensembl_gene_id: NIES2130_23360
symbol: smpB
gene_biotype: protein_coding
description:
  SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...]


ensembl_gene_id: NIES2130_23370
symbol: OKH56758.1
gene_biotype: protein_coding
description:
  Putative bicarbonate transporter, IctB family; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_23430
symbol: OKH56767.1
gene_biotype: protein_coding
description:
  Chemotaxis protein CheX; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_23440
symbol: OKH56769.1
gene_biotype: protein_coding
description:
  Erythromycin biosynthesis sensory transduction protein eryC1; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DegT/DnrJ/EryC1 family.


ensembl_gene_id: NIES2130_23470
symbol: OKH56775.1
gene_biotype: protein_coding
description:
  Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_23475
symbol: OKH56776.1
gene_biotype: protein_coding
description:
  Lipopolysaccharide biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_23500
symbol: OKH56781.1
gene_biotype: protein_coding
description:
  C-3',4' desaturase CrtD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_23535
symbol: OKH56787.1
gene_biotype: protein_coding
description:
  Peptidase M16; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase M16 family.


ensembl_gene_id: NIES2130_23540
symbol: OKH56805.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the fructosamine kinase family.


ensembl_gene_id: NIES2130_23545
symbol: OKH56788.1
gene_biotype: protein_coding
description:
  Dethiobiotin synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_23550
symbol: OKH56789.1
gene_biotype: protein_coding
description:
  Hydrogenase accessory protein HypB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_23555
symbol: hypA
gene_biotype: protein_coding
description:
  Hydrogenase maturation nickel metallochaperone HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.


ensembl_gene_id: NIES2130_23560
symbol: OKH56791.1
gene_biotype: protein_coding
description:
  Hydrogenase expression/formation protein HypE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_23575
symbol: hupD
gene_biotype: protein_coding
description:
  Hydrogenase formation protein HypD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_23580
symbol: OKH56795.1
gene_biotype: protein_coding
description:
  Hydrogenase assembly protein HupF; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_23585
symbol: hypF_1
gene_biotype: protein_coding
description:
  Carbamoyltransferase HypF; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_23610
symbol: OKH56801.1
gene_biotype: protein_coding
description:
  Hydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_23625
symbol: OKH56698.1
gene_biotype: protein_coding
description:
  Swarming motility protein ybiA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_23650
symbol: OKH56702.1
gene_biotype: protein_coding
description:
  DUF975 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_23660
symbol: OKH56704.1
gene_biotype: protein_coding
description:
  DUF1868 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_23665
symbol: OKH56705.1
gene_biotype: protein_coding
description:
  DNA polymerase III subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_23705
symbol: lpxD
gene_biotype: protein_coding
description:
  UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily.


ensembl_gene_id: NIES2130_23715
symbol: NIES2130_23715
gene_biotype: protein_coding
description:
  Transposase; Frameshifted; incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_23720
symbol: OKH56746.1
gene_biotype: protein_coding
description:
  Heterodisulfide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_23730
symbol: OKH56714.1
gene_biotype: protein_coding
description:
  Beta-ketoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.


ensembl_gene_id: NIES2130_23735
symbol: OKH56715.1
gene_biotype: protein_coding
description:
  Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.


ensembl_gene_id: NIES2130_23740
symbol: OKH56716.1
gene_biotype: protein_coding
description:
  Chase2 sensor protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_23790
symbol: NIES2130_23790
gene_biotype: protein_coding
description:
  VapC toxin family PIN domain ribonuclease; Incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_23795
symbol: OKH56726.1
gene_biotype: protein_coding
description:
  Ion transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_23815
symbol: OKH56729.1
gene_biotype: protein_coding
description:
  P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_23850
symbol: OKH56735.1
gene_biotype: protein_coding
description:
  Geranylgeranyl reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_23880
symbol: OKH56749.1
gene_biotype: protein_coding
description:
  vioC monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_23890
symbol: OKH56742.1
gene_biotype: protein_coding
description:
  Cytochrome C biogenesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_23895
symbol: ccsB
gene_biotype: protein_coding
description:
  Cytochrome C biogenesis protein CcsB; Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment.


ensembl_gene_id: NIES2130_23910
symbol: OKH56634.1
gene_biotype: protein_coding
description:
  Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family.


ensembl_gene_id: NIES2130_23915
symbol: nadD
gene_biotype: protein_coding
description:
  Nicotinic acid mononucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).


ensembl_gene_id: NIES2130_23925
symbol: OKH56636.1
gene_biotype: protein_coding
description:
  Isochorismate-pyruvate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_23930
symbol: nadE
gene_biotype: protein_coding
description:
  NAD+ synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.


ensembl_gene_id: NIES2130_23935
symbol: dapB
gene_biotype: protein_coding
description:
  4-hydroxy-tetrahydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.


ensembl_gene_id: NIES2130_23945
symbol: OKH56640.1
gene_biotype: protein_coding
description:
  Methanol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_24015
symbol: OKH56649.1
gene_biotype: protein_coding
description:
  ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 9 family.


ensembl_gene_id: NIES2130_24065
symbol: OKH56657.1
gene_biotype: protein_coding
description:
  Zn-dependent protease with chaperone function; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_24075
symbol: prfC
gene_biotype: protein_coding
description:
  Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.


ensembl_gene_id: NIES2130_24090
symbol: OKH56662.1
gene_biotype: protein_coding
description:
  Delta-aminolevulinic acid dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ALAD family.


ensembl_gene_id: NIES2130_24105
symbol: OKH56665.1
gene_biotype: protein_coding
description:
  Alpha-ketoacid dehydrogenase subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.


ensembl_gene_id: NIES2130_24110
symbol: secD
gene_biotype: protein_coding
description:
  Protein-export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.


ensembl_gene_id: NIES2130_24115
symbol: secF
gene_biotype: protein_coding
description:
  Protein-export membrane protein SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecF subfamily.


ensembl_gene_id: NIES2130_24135
symbol: OKH56671.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SUA5 family.


ensembl_gene_id: NIES2130_24140
symbol: prmC
gene_biotype: protein_coding
description:
  protein-(glutamine-N5) methyltransferase, release factor-specific; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.


ensembl_gene_id: NIES2130_24170
symbol: tsaD
gene_biotype: protein_coding
description:
  tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.


ensembl_gene_id: NIES2130_24175
symbol: OKH56676.1
gene_biotype: protein_coding
description:
  Photosystem I reaction center subunit III; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_24180
symbol: psaJ
gene_biotype: protein_coding
description:
  Photosystem I reaction center subunit IX; May help in the organization of the PsaE and PsaF subunits. Belongs to the PsaJ family.


ensembl_gene_id: NIES2130_24185
symbol: psaL
gene_biotype: protein_coding
description:
  Photosystem I reaction center protein subunit XI; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_24195
symbol: OKH56679.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the RemA family.


ensembl_gene_id: NIES2130_24215
symbol: OKH56683.1
gene_biotype: protein_coding
description:
  ATPase involved in DNA repair; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_24225
symbol: OKH56685.1
gene_biotype: protein_coding
description:
  Solanesyl diphosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FPP/GGPP synthase family.


ensembl_gene_id: NIES2130_24270
symbol: OKH56578.1
gene_biotype: protein_coding
description:
  FeS-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_24275
symbol: cytA
gene_biotype: protein_coding
description:
  Cytochrome C6; Functions as an electron carrier between membrane-bound cytochrome b6-f and photosystem I in oxygenic photosynthesis.


ensembl_gene_id: NIES2130_24285
symbol: OKH56580.1
gene_biotype: protein_coding
description:
  Cobyrinic acid a,c-diamide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_24290
symbol: ileS
gene_biotype: protein_coding
description:
  isoleucine--tRNA ligase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily.


ensembl_gene_id: NIES2130_24310
symbol: OKH56584.1
gene_biotype: protein_coding
description:
  Phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating); Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.


ensembl_gene_id: NIES2130_24320
symbol: OKH56586.1
gene_biotype: protein_coding
description:
  Heterocyst differentiation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_24335
symbol: OKH56589.1
gene_biotype: protein_coding
description:
  Peptidase S8; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_24345
symbol: OKH56591.1
gene_biotype: protein_coding
description:
  Bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_24355
symbol: OKH56593.1
gene_biotype: protein_coding
description:
  Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the P(II) protein family.


ensembl_gene_id: NIES2130_24360
symbol: OKH56594.1
gene_biotype: protein_coding
description:
  Non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.


ensembl_gene_id: NIES2130_24365
symbol: OKH56595.1
gene_biotype: protein_coding
description:
  Phosphoglucosamine mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_24370
symbol: OKH56596.1
gene_biotype: protein_coding
description:
  Prolyl aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S33 family.


ensembl_gene_id: NIES2130_24375
symbol: OKH56597.1
gene_biotype: protein_coding
description:
  DNA invertase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_24400
symbol: OKH56602.1
gene_biotype: protein_coding
description:
  Plasmid segregation centromere-binding protein ParR; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_24405
symbol: OKH56603.1
gene_biotype: protein_coding
description:
  Chromosome segregation protein ParM; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_24420
symbol: queC
gene_biotype: protein_coding
description:
  7-cyano-7-deazaguanine synthase QueC; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Belongs to the QueC family.


ensembl_gene_id: NIES2130_24445
symbol: pyrE-2
gene_biotype: protein_coding
description:
  Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).


ensembl_gene_id: NIES2130_24450
symbol: thiC
gene_biotype: protein_coding
description:
  Phosphomethylpyrimidine synthase; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. Belongs to the ThiC family.


ensembl_gene_id: NIES2130_24470
symbol: OKH56630.1
gene_biotype: protein_coding
description:
  DUF4327 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_24480
symbol: OKH56615.1
gene_biotype: protein_coding
description:
  Thioredoxin-disulfide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_24500
symbol: OKH56631.1
gene_biotype: protein_coding
description:
  Glucokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_24525
symbol: pyrG
gene_biotype: protein_coding
description:
  CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.


ensembl_gene_id: NIES2130_24540
symbol: OKH56625.1
gene_biotype: protein_coding
description:
  DUF2085 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_24545
symbol: OKH56626.1
gene_biotype: protein_coding
description:
  TIGR00300 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_24555
symbol: NIES2130_24555
gene_biotype: protein_coding
description:
  DNA methyltransferase; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_24590
symbol: OKH56534.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family.


ensembl_gene_id: NIES2130_24625
symbol: OKH56540.1
gene_biotype: protein_coding
description:
  Taurine catabolism dioxygenase TauD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_24770
symbol: OKH56566.1
gene_biotype: protein_coding
description:
  DevC protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_24805
symbol: obg
gene_biotype: protein_coding
description:
  GTPase ObgE; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.


ensembl_gene_id: NIES2130_24815
symbol: OKH56483.1
gene_biotype: protein_coding
description:
  Tetracenomycin C synthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_24820
symbol: OKH56484.1
gene_biotype: protein_coding
description:
  Glutamate--cysteine ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_24825
symbol: ligA
gene_biotype: protein_coding
description:
  DNA ligase (NAD(+)) LigA; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA; Belongs to the NAD-dependent DNA ligase family. LigA subfamily.


ensembl_gene_id: NIES2130_24830
symbol: lipB
gene_biotype: protein_coding
description:
  Lipoyl(octanoyl) transferase; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate.


ensembl_gene_id: NIES2130_24835
symbol: lrtA
gene_biotype: protein_coding
description:
  Ribosomal subunit interface protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.


ensembl_gene_id: NIES2130_24850
symbol: OKH56490.1
gene_biotype: protein_coding
description:
  DUF5009 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_24865
symbol: OKH56492.1
gene_biotype: protein_coding
description:
  ATP-grasp domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_24875
symbol: chlB
gene_biotype: protein_coding
description:
  Light-independent protochlorophyllide reductase subunit B; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (ChlN-ChlB) is the catalytic component of the complex.


ensembl_gene_id: NIES2130_24885
symbol: OKH56496.1
gene_biotype: protein_coding
description:
  Site-specific DNA-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_24900
symbol: OKH56499.1
gene_biotype: protein_coding
description:
  ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: NIES2130_24905
symbol: rplT
gene_biotype: protein_coding
description:
  50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.


ensembl_gene_id: NIES2130_24910
symbol: rpmI
gene_biotype: protein_coding
description:
  50S ribosomal protein L35; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL35 family.


ensembl_gene_id: NIES2130_24925
symbol: OKH56504.1
gene_biotype: protein_coding
description:
  DNA helicase UvrD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_24975
symbol: NIES2130_24975
gene_biotype: protein_coding
description:
  Serine/threonine protein kinase; Incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S26 family.


ensembl_gene_id: NIES2130_25000
symbol: tyrS
gene_biotype: protein_coding
description:
  tyrosine--tRNA ligase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 2 subfamily.


ensembl_gene_id: NIES2130_25005
symbol: pyrF
gene_biotype: protein_coding
description:
  Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily.


ensembl_gene_id: NIES2130_25020
symbol: OKH56518.1
gene_biotype: protein_coding
description:
  uracil-DNA glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_25035
symbol: priA
gene_biotype: protein_coding
description:
  Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.


ensembl_gene_id: NIES2130_25075
symbol: pdhA
gene_biotype: protein_coding
description:
  Pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).


ensembl_gene_id: NIES2130_25080
symbol: OKH56430.1
gene_biotype: protein_coding
description:
  Aldose epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_25090
symbol: OKH56431.1
gene_biotype: protein_coding
description:
  Fructose-1,6-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis.


ensembl_gene_id: NIES2130_25110
symbol: OKH56435.1
gene_biotype: protein_coding
description:
  Exostosin family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_25160
symbol: OKH56443.1
gene_biotype: protein_coding
description:
  CAAX protease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_25165
symbol: OKH56444.1
gene_biotype: protein_coding
description:
  MarC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_25200
symbol: OKH56451.1
gene_biotype: protein_coding
description:
  Cysteine desulfurase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_25245
symbol: OKH56459.1
gene_biotype: protein_coding
description:
  Molybdopterin molybdenumtransferase; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.


ensembl_gene_id: NIES2130_25260
symbol: OKH56462.1
gene_biotype: protein_coding
description:
  50S ribosomal protein L33; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_25265
symbol: rpsR
gene_biotype: protein_coding
description:
  30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.


ensembl_gene_id: NIES2130_25270
symbol: OKH56464.1
gene_biotype: protein_coding
description:
  RNB domain-containing ribonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_25280
symbol: OKH56466.1
gene_biotype: protein_coding
description:
  Cholesterol oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_25370
symbol: dhmA2_2
gene_biotype: protein_coding
description:
  Alpha/beta hydrolase; Incomplete; partial in the middle of a contig; missing start and stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_25410
symbol: NIES2130_25410
gene_biotype: protein_coding
description:
  VapC toxin family PIN domain ribonuclease; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_25415
symbol: rnz
gene_biotype: protein_coding
description:
  Ribonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family.


ensembl_gene_id: NIES2130_25455
symbol: NIES2130_25455
gene_biotype: protein_coding
description:
  Oxidoreductase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LDH/MDH superfamily.


ensembl_gene_id: NIES2130_25505
symbol: OKH56181.1
gene_biotype: protein_coding
description:
  Phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine.


ensembl_gene_id: NIES2130_25520
symbol: NIES2130_25520
gene_biotype: protein_coding
description:
  GNAT family N-acetyltransferase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_25550
symbol: purH
gene_biotype: protein_coding
description:
  Bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_25565
symbol: NIES2130_25565
gene_biotype: protein_coding
description:
  Plasmid stabilization protein; Incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_25575
symbol: OKH56192.1
gene_biotype: protein_coding
description:
  Phosphopantothenate synthase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.


ensembl_gene_id: NIES2130_25630
symbol: OKH56111.1
gene_biotype: protein_coding
description:
  Sodium-dependent bicarbonate transport family permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_25655
symbol: OKH56115.1
gene_biotype: protein_coding
description:
  Signal peptidase I; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S26 family.


ensembl_gene_id: NIES2130_25660
symbol: OKH56116.1
gene_biotype: protein_coding
description:
  [cytidine(C)-cytidine(C)-adenosine (A)]-adding enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_25675
symbol: NIES2130_25675
gene_biotype: protein_coding
description:
  Disulfide bond formation protein DsbA; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_25680
symbol: OKH56118.1
gene_biotype: protein_coding
description:
  tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_25735
symbol: argD
gene_biotype: protein_coding
description:
  Aspartate aminotransferase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.


ensembl_gene_id: NIES2130_25745
symbol: OKH56129.1
gene_biotype: protein_coding
description:
  Capsular biosynthesis protein CpsI; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_25845
symbol: NIES2130_25845
gene_biotype: protein_coding
description:
  Gluconolaconase; Incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_25865
symbol: NIES2130_25865
gene_biotype: protein_coding
description:
  Dienelactone hydrolase; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_25875
symbol: NIES2130_25875
gene_biotype: protein_coding
description:
  Dienelactone hydrolase; Incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_25880
symbol: OKH56150.1
gene_biotype: protein_coding
description:
  Acylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_25895
symbol: OKH56162.1
gene_biotype: protein_coding
description:
  Aspartate aminotransferase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: NIES2130_25915
symbol: NIES2130_25915
gene_biotype: protein_coding
description:
  Non-ribosomal peptide synthetase; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_25925
symbol: OKH55853.1
gene_biotype: protein_coding
description:
  acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_25935
symbol: NIES2130_25935
gene_biotype: protein_coding
description:
  Glutathione S-transferase; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_25965
symbol: OKH55859.1
gene_biotype: protein_coding
description:
  Aliphatic sulfonate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_25990
symbol: OKH55864.1
gene_biotype: protein_coding
description:
  NLPA lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the nlpA lipoprotein family.


ensembl_gene_id: NIES2130_25995
symbol: OKH55865.1
gene_biotype: protein_coding
description:
  NLPA lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_26000
symbol: OKH55866.1
gene_biotype: protein_coding
description:
  Methionine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_26005
symbol: metN
gene_biotype: protein_coding
description:
  Methionine ABC transporter ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.


ensembl_gene_id: NIES2130_26010
symbol: OKH55868.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the nlpA lipoprotein family.


ensembl_gene_id: NIES2130_26085
symbol: tas
gene_biotype: protein_coding
description:
  NADP(H)-dependent aldo-keto reductase; Complements the prephenate dehydrogenase dysfunction of an Escherichia coli tyrosine auxotroph strain; member of the aldo/keto reductase 2 family; crystal structure of purified Escherichia coli protein shows bound NADPH; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_26100
symbol: OKH55884.1
gene_biotype: protein_coding
description:
  NADPH-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the flavin oxidoreductase frp family.


ensembl_gene_id: NIES2130_26110
symbol: OKH55885.1
gene_biotype: protein_coding
description:
  3-oxoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_26115
symbol: ssuB
gene_biotype: protein_coding
description:
  Aliphatic sulfonate ABC transporter ATP-binding protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.


ensembl_gene_id: NIES2130_26190
symbol: ssuC
gene_biotype: protein_coding
description:
  Catalyzes the release of sulfite from alkanesulfonates; incomplete; partial in the middle of a contig; missing start and stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_26220
symbol: NIES2130_26220
gene_biotype: protein_coding
description:
  Phosphate ABC transporter substrate-binding protein; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_26245
symbol: cbiA
gene_biotype: protein_coding
description:
  Plasmid stabilization protein; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.


ensembl_gene_id: NIES2130_26250
symbol: opcA
gene_biotype: protein_coding
description:
  Glucose-6-phosphate dehydrogenase assembly protein OpcA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_26255
symbol: zwf_1
gene_biotype: protein_coding
description:
  Glucose-6-phosphate dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.


ensembl_gene_id: NIES2130_26260
symbol: tal-2
gene_biotype: protein_coding
description:
  Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily.


ensembl_gene_id: NIES2130_26265
symbol: fbp
gene_biotype: protein_coding
description:
  Fructose-bisphosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FBPase class 1 family.


ensembl_gene_id: NIES2130_26290
symbol: NIES2130_26290
gene_biotype: protein_coding
description:
  Ribonucleoside-triphosphate reductase; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_26300
symbol: OKH55615.1
gene_biotype: protein_coding
description:
  Serine O-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_26310
symbol: OKH55617.1
gene_biotype: protein_coding
description:
  Rhodanese-related sulfurtransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_26315
symbol: hrcA
gene_biotype: protein_coding
description:
  Heat-inducible transcriptional repressor HrcA; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons.


ensembl_gene_id: NIES2130_26320
symbol: OKH55619.1
gene_biotype: protein_coding
description:
  DUF2834 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_26360
symbol: OKH55626.1
gene_biotype: protein_coding
description:
  CPXCG motif-containing cysteine-rich protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_26380
symbol: OKH55630.1
gene_biotype: protein_coding
description:
  DUF4037 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_26385
symbol: aroC
gene_biotype: protein_coding
description:
  Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.


ensembl_gene_id: NIES2130_26405
symbol: cofG
gene_biotype: protein_coding
description:
  7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit CofG; Catalyzes the radical-mediated synthesis of 7,8-didemethyl-8- hydroxy-5-deazariboflavin (FO) from 5-amino-5-(4-hydroxybenzyl)-6-(D- ribitylimino)-5,6-dihydrouracil.


ensembl_gene_id: NIES2130_26410
symbol: OKH55636.1
gene_biotype: protein_coding
description:
  Pilus assembly protein PilB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_26430
symbol: OKH55654.1
gene_biotype: protein_coding
description:
  Glutaredoxin 3; Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins.


ensembl_gene_id: NIES2130_26435
symbol: gshB
gene_biotype: protein_coding
description:
  Glutathione synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic GSH synthase family.


ensembl_gene_id: NIES2130_26440
symbol: ftsZ
gene_biotype: protein_coding
description:
  Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.


ensembl_gene_id: NIES2130_26445
symbol: OKH55642.1
gene_biotype: protein_coding
description:
  Cell division protein FtsQ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_26460
symbol: OKH55645.1
gene_biotype: protein_coding
description:
  Photosystem II manganese-stabilizing polypeptide; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_26505
symbol: NIES2130_26505
gene_biotype: protein_coding
description:
  Flagellar motor protein; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_26525
symbol: OKH55385.1
gene_biotype: protein_coding
description:
  Photosystem II S4 domain protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_26545
symbol: kaiC
gene_biotype: protein_coding
description:
  Circadian clock protein KaiC; Core component of the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. Binds to DNA. The KaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction; Belongs to the KaiC family.


ensembl_gene_id: NIES2130_26550
symbol: kaiB
gene_biotype: protein_coding
description:
  Circadian clock protein KaiB; Component of the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. The KaiABC complex may act as a promoter-non-specific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction. In the complex, it decreases the phosphorylation status of KaiC. It has no effect on KaiC by itself, but instead needs the presence of both KaiA and KaiC, suggesting that it acts by antagonizing the interaction between KaiA and KaiC; Belongs to the KaiB family.


ensembl_gene_id: NIES2130_26555
symbol: kaiA
gene_biotype: protein_coding
description:
  Circadian clock protein KaiA; Component of the kaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. The kaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction. In the complex, it enhances the phosphorylation status of kaiC. In contrast, the presence of kaiB in the complex decreases the phosphorylation status of kaiC, suggesting that kaiB acts by antagonizing the interaction between kaiA and kaiC. A kaiA dimer is sufficient to enhance kaiC he [...]


ensembl_gene_id: NIES2130_26590
symbol: NIES2130_26590
gene_biotype: protein_coding
description:
  Glycerate kinase; Incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_26595
symbol: selO
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the transfer of adenosine 5'-monophosphate (AMP) to Ser, Thr or Tyr residues of target proteins (AMPylation). Belongs to the SELO family.


ensembl_gene_id: NIES2130_26600
symbol: OKH55398.1
gene_biotype: protein_coding
description:
  Alanine acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_26605
symbol: bioB
gene_biotype: protein_coding
description:
  Biotin synthase BioB; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.


ensembl_gene_id: NIES2130_26610
symbol: petL
gene_biotype: protein_coding
description:
  Cytochrome B6; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. PetL is important for photoautotrophic growth as well as for electron transfer efficiency and stability of the cytochrome b6-f complex.


ensembl_gene_id: NIES2130_26620
symbol: aroB-2
gene_biotype: protein_coding
description:
  3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).


ensembl_gene_id: NIES2130_26640
symbol: OKH55406.1
gene_biotype: protein_coding
description:
  Exopolysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_26645
symbol: OKH55407.1
gene_biotype: protein_coding
description:
  Lipid kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_26650
symbol: OKH55408.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S51 family.


ensembl_gene_id: NIES2130_26660
symbol: OKH55410.1
gene_biotype: protein_coding
description:
  Pyruvate phosphate dikinase PEP/pyruvate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_26665
symbol: OKH55411.1
gene_biotype: protein_coding
description:
  Lipolytic protein G-D-S-L family; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_26750
symbol: murQ
gene_biotype: protein_coding
description:
  N-acetylmuramic acid 6-phosphate etherase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate.


ensembl_gene_id: NIES2130_26755
symbol: OKH55426.1
gene_biotype: protein_coding
description:
  Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 13 family.


ensembl_gene_id: NIES2130_26765
symbol: NIES2130_26765
gene_biotype: protein_coding
description:
  acyl-CoA desaturase; Frameshifted; internal stop; incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_26805
symbol: OKH55337.1
gene_biotype: protein_coding
description:
  Phycobilisome degradation family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_26885
symbol: OKH55352.1
gene_biotype: protein_coding
description:
  Aspartyl beta-hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_26910
symbol: NIES2130_26910
gene_biotype: protein_coding
description:
  Putative toxin-antitoxin system toxin component, PIN family; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_26930
symbol: OKH55360.1
gene_biotype: protein_coding
description:
  Nitrogenase-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ArsC family.


ensembl_gene_id: NIES2130_26960
symbol: OKH55366.1
gene_biotype: protein_coding
description:
  Ferredoxin III, nif-specific; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_26970
symbol: OKH55368.1
gene_biotype: protein_coding
description:
  Acetoacetate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_26980
symbol: OKH55370.1
gene_biotype: protein_coding
description:
  tRNA dihydrouridine synthase DusB; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.


ensembl_gene_id: NIES2130_27005
symbol: mazF_1
gene_biotype: protein_coding
description:
  MazF family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_27010
symbol: OKH55375.1
gene_biotype: protein_coding
description:
  Arginine decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_27020
symbol: ychF
gene_biotype: protein_coding
description:
  Redox-regulated ATPase YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.


ensembl_gene_id: NIES2130_27035
symbol: NIES2130_27035
gene_biotype: protein_coding
description:
  AAA family ATPase; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_27040
symbol: OKH55137.1
gene_biotype: protein_coding
description:
  Acetolactate synthase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TPP enzyme family.


ensembl_gene_id: NIES2130_27045
symbol: OKH55138.1
gene_biotype: protein_coding
description:
  NADP-dependent succinic semialdehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_27060
symbol: OKH55141.1
gene_biotype: protein_coding
description:
  Ribosome biogenesis GTPase YlqF; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.


ensembl_gene_id: NIES2130_27080
symbol: fdhD
gene_biotype: protein_coding
description:
  Formate dehydrogenase accessory protein FdhD; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.


ensembl_gene_id: NIES2130_27110
symbol: OKH55150.1
gene_biotype: protein_coding
description:
  Arsenical-resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_27115
symbol: OKH55174.1
gene_biotype: protein_coding
description:
  Arsenate reductase, glutathione/glutaredoxin type; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.


ensembl_gene_id: NIES2130_27145
symbol: NIES2130_27145
gene_biotype: protein_coding
description:
  DNA invertase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_27150
symbol: OKH55154.1
gene_biotype: protein_coding
description:
  Nitrilase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_27155
symbol: OKH55155.1
gene_biotype: protein_coding
description:
  Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: NIES2130_27165
symbol: OKH55157.1
gene_biotype: protein_coding
description:
  Hydantoinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_27170
symbol: OKH55158.1
gene_biotype: protein_coding
description:
  DUF3598 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_27175
symbol: hisS
gene_biotype: protein_coding
description:
  histidine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_27225
symbol: NIES2130_27225
gene_biotype: protein_coding
description:
  KAP family P-loop domain-containing protein; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_27235
symbol: OKH55167.1
gene_biotype: protein_coding
description:
  Magnesium chelatase ATPase subunit I; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX.


ensembl_gene_id: NIES2130_27245
symbol: OKH55169.1
gene_biotype: protein_coding
description:
  Nucleotidyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_27250
symbol: rpl21
gene_biotype: protein_coding
description:
  50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.


ensembl_gene_id: NIES2130_27255
symbol: rpmA
gene_biotype: protein_coding
description:
  50S ribosomal protein L27; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL27 family.


ensembl_gene_id: NIES2130_27295
symbol: ureC
gene_biotype: protein_coding
description:
  Urease subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_27305
symbol: ureB
gene_biotype: protein_coding
description:
  Urease subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the urease beta subunit family.


ensembl_gene_id: NIES2130_27315
symbol: ureA
gene_biotype: protein_coding
description:
  Urease subunit gamma; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the urease gamma subunit family.


ensembl_gene_id: NIES2130_27320
symbol: ureD
gene_biotype: protein_coding
description:
  Urease accessory protein; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.


ensembl_gene_id: NIES2130_27335
symbol: OKH55096.1
gene_biotype: protein_coding
description:
  Peptidase C15; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase C15 family.


ensembl_gene_id: NIES2130_27340
symbol: hisH
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase subunit HisH; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.


ensembl_gene_id: NIES2130_27345
symbol: OKH55098.1
gene_biotype: protein_coding
description:
  16S rRNA (guanine(966)-N(2))-methyltransferase RsmD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_27350
symbol: OKH55099.1
gene_biotype: protein_coding
description:
  Cytochrome b6-f complex subunit PetG; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_27370
symbol: OKH55103.1
gene_biotype: protein_coding
description:
  LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_27400
symbol: cheB
gene_biotype: protein_coding
description:
  Chemotaxis response regulator protein-glutamate methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.


ensembl_gene_id: NIES2130_27450
symbol: pdxJ
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate.


ensembl_gene_id: NIES2130_27455
symbol: OKH55116.1
gene_biotype: protein_coding
description:
  SnoaL-like polyketide cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_27470
symbol: OKH55118.1
gene_biotype: protein_coding
description:
  Acid phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_27475
symbol: OKH55119.1
gene_biotype: protein_coding
description:
  Farnesyl-diphosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FPP/GGPP synthase family.


ensembl_gene_id: NIES2130_27480
symbol: folD
gene_biotype: protein_coding
description:
  Methenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.


ensembl_gene_id: NIES2130_27490
symbol: OKH55122.1
gene_biotype: protein_coding
description:
  Phospholipid-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_27520
symbol: mutS
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.


ensembl_gene_id: NIES2130_27535
symbol: sfsA
gene_biotype: protein_coding
description:
  Sugar fermentation stimulation protein SfsA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SfsA family.


ensembl_gene_id: NIES2130_27545
symbol: OKH54885.1
gene_biotype: protein_coding
description:
  Glycerophosphodiester phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_27580
symbol: OKH54892.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UbiD family.


ensembl_gene_id: NIES2130_27630
symbol: OKH54923.1
gene_biotype: protein_coding
description:
  L-glutamate gamma-semialdehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: NIES2130_27675
symbol: smc
gene_biotype: protein_coding
description:
  Chromosome segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family.


ensembl_gene_id: NIES2130_27695
symbol: OKH54924.1
gene_biotype: protein_coding
description:
  Cobalamin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_27775
symbol: OKH54881.1
gene_biotype: protein_coding
description:
  A/G-specific adenine glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_27835
symbol: NIES2130_27835
gene_biotype: protein_coding
description:
  DUF5123 domain-containing protein; Incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_27890
symbol: rpsO
gene_biotype: protein_coding
description:
  30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.


ensembl_gene_id: NIES2130_27945
symbol: OKH54874.1
gene_biotype: protein_coding
description:
  Polyphosphate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_27960
symbol: OKH54877.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: NIES2130_27985
symbol: NIES2130_27985
gene_biotype: protein_coding
description:
  ABC transporter; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_28005
symbol: OKH54667.1
gene_biotype: protein_coding
description:
  AMP-dependent synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_28020
symbol: OKH54669.1
gene_biotype: protein_coding
description:
  2-isopropylmalate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the alpha-IPM synthase/homocitrate synthase family.


ensembl_gene_id: NIES2130_28085
symbol: OKH54682.1
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_28095
symbol: NIES2130_28095
gene_biotype: protein_coding
description:
  Patatin; Incomplete; partial in the middle of a contig; missing start and stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_28110
symbol: OKH54637.1
gene_biotype: protein_coding
description:
  3-deoxy-7-phosphoheptulonate synthase; Catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7-phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_28140
symbol: NIES2130_28140
gene_biotype: protein_coding
description:
  S-layer protein; Incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_28155
symbol: NIES2130_28155
gene_biotype: protein_coding
description:
  Secretion protein HlyD; Incomplete; partial in the middle of a contig; missing start and stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_28205
symbol: OKH54654.1
gene_biotype: protein_coding
description:
  4,5-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_28225
symbol: OKH54657.1
gene_biotype: protein_coding
description:
  Ferrichrome-iron receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_28310
symbol: NIES2130_28310
gene_biotype: protein_coding
description:
  HNH endonuclease; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_28330
symbol: OKH54455.1
gene_biotype: protein_coding
description:
  Putative baseplate assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_28335
symbol: OKH54456.1
gene_biotype: protein_coding
description:
  Baseplate protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_28360
symbol: OKH54461.1
gene_biotype: protein_coding
description:
  Type IV secretion protein Rhs; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_28440
symbol: fumC
gene_biotype: protein_coding
description:
  Fumarate hydratase, class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.


ensembl_gene_id: NIES2130_28450
symbol: OKH54476.1
gene_biotype: protein_coding
description:
  Glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_28455
symbol: OKH54477.1
gene_biotype: protein_coding
description:
  Sugar dehydrogenase; Converts glucose to D-glucono-1,5 lactone; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_28475
symbol: OKH54479.1
gene_biotype: protein_coding
description:
  Fructose-bisphosphate aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_28490
symbol: OKH54441.1
gene_biotype: protein_coding
description:
  Quercetin 2,3-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pirin family.


ensembl_gene_id: NIES2130_28495
symbol: OKH54404.1
gene_biotype: protein_coding
description:
  3-ketoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_28500
symbol: OKH54405.1
gene_biotype: protein_coding
description:
  Nif11-like leader peptide family natural product precursor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_28505
symbol: nifH
gene_biotype: protein_coding
description:
  Nitrogenase iron protein; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family.


ensembl_gene_id: NIES2130_28580
symbol: OKH54421.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MIP/aquaporin (TC 1.A.8) family.


ensembl_gene_id: NIES2130_28625
symbol: OKH54430.1
gene_biotype: protein_coding
description:
  F420-dependent NADP oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_28775
symbol: OKH54371.1
gene_biotype: protein_coding
description:
  Thiamine biosynthesis protein ThiJ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_28815
symbol: NIES2130_28815
gene_biotype: protein_coding
description:
  Carboxymuconolactone decarboxylase; Incomplete; partial in the middle of a contig; missing start and stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_28870
symbol: NIES2130_28870
gene_biotype: protein_coding
description:
  DDE endonuclease; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_28910
symbol: NIES2130_28910
gene_biotype: protein_coding
description:
  Transporter; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_28935
symbol: NIES2130_28935
gene_biotype: protein_coding
description:
  Short-chain dehydrogenase; Incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_28975
symbol: OKH54318.1
gene_biotype: protein_coding
description:
  Cyanovirin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_29010
symbol: radC
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0758 family.


ensembl_gene_id: NIES2130_29015
symbol: OKH54325.1
gene_biotype: protein_coding
description:
  Phosphoribulokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_29025
symbol: OKH54358.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0176 family.


ensembl_gene_id: NIES2130_29045
symbol: NIES2130_29045
gene_biotype: protein_coding
description:
  Cysteine desulfurase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_29060
symbol: OKH54332.1
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease III; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_29135
symbol: OKH54347.1
gene_biotype: protein_coding
description:
  Cytochrome ubiquinol oxidase subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cytochrome ubiquinol oxidase subunit 1 family.


ensembl_gene_id: NIES2130_29140
symbol: OKH54348.1
gene_biotype: protein_coding
description:
  Cytochrome d ubiquinol oxidase subunit II; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_29160
symbol: NIES2130_29160
gene_biotype: protein_coding
description:
  HNH endonuclease; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 9 family.


ensembl_gene_id: NIES2130_29175
symbol: OKH54352.1
gene_biotype: protein_coding
description:
  Cysteine desufuration protein SufE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_29200
symbol: OKH54360.1
gene_biotype: protein_coding
description:
  DUF305 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_29220
symbol: NIES2130_29220
gene_biotype: protein_coding
description:
  IS5 family transposase; Frameshifted; incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase M50B family.


ensembl_gene_id: NIES2130_29245
symbol: azoR
gene_biotype: protein_coding
description:
  FMN-dependent NADH-azoreductase; Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family.


ensembl_gene_id: NIES2130_29270
symbol: OKH54168.1
gene_biotype: protein_coding
description:
  Creatinine amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_29410
symbol: pyrR
gene_biotype: protein_coding
description:
  Bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant.


ensembl_gene_id: NIES2130_29415
symbol: cobD
gene_biotype: protein_coding
description:
  Cobalamin biosynthesis protein; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.


ensembl_gene_id: NIES2130_29455
symbol: OKH54018.1
gene_biotype: protein_coding
description:
  Recombinase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_29485
symbol: OKH53993.1
gene_biotype: protein_coding
description:
  Aspartoacylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the AspA/AstE family. Aspartoacylase subfamily.


ensembl_gene_id: NIES2130_29495
symbol: OKH53995.1
gene_biotype: protein_coding
description:
  9-cis-epoxycarotenoid dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_29505
symbol: OKH53997.1
gene_biotype: protein_coding
description:
  Adenylate/guanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_29510
symbol: OKH54020.1
gene_biotype: protein_coding
description:
  Deoxyhypusine synthase; Transforms a conserved lysine residue of initiation factor 5A into deoxyhypusine; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the deoxyhypusine synthase family.


ensembl_gene_id: NIES2130_29515
symbol: OKH53998.1
gene_biotype: protein_coding
description:
  O-acetyl-ADP-ribose deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_29525
symbol: OKH54021.1
gene_biotype: protein_coding
description:
  cob(I)yrinic acid a,c-diamide adenosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_29570
symbol: OKH54007.1
gene_biotype: protein_coding
description:
  NADPH:quinone reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_29590
symbol: OKH54011.1
gene_biotype: protein_coding
description:
  phenylacetate--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_29615
symbol: OKH54025.1
gene_biotype: protein_coding
description:
  ADP-ribose pyrophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_29620
symbol: pgk
gene_biotype: protein_coding
description:
  Phosphoglycerate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the phosphoglycerate kinase family.


ensembl_gene_id: NIES2130_29645
symbol: OKH53812.1
gene_biotype: protein_coding
description:
  NAD(P)-dependent alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_29675
symbol: OKH53817.1
gene_biotype: protein_coding
description:
  MvdD family ATP-grasp ribosomal peptide maturase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_29680
symbol: OKH53818.1
gene_biotype: protein_coding
description:
  MvdC family ATP-grasp ribosomal peptide maturase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_29725
symbol: OKH53827.1
gene_biotype: protein_coding
description:
  TIGR02646 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_29740
symbol: OKH53830.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-A beta-lactamase family.


ensembl_gene_id: NIES2130_29745
symbol: OKH53831.1
gene_biotype: protein_coding
description:
  Carboxypeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_29750
symbol: OKH53832.1
gene_biotype: protein_coding
description:
  Precorrin-3B methylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_29770
symbol: OKH53836.1
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase PcrA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_29780
symbol: NIES2130_29780
gene_biotype: protein_coding
description:
  Twitching motility protein PilT; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_29825
symbol: OKH53844.1
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LeuD family.


ensembl_gene_id: NIES2130_29870
symbol: NIES2130_29870
gene_biotype: protein_coding
description:
  Short chain dehydrogenase; Incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_29875
symbol: OKH53644.1
gene_biotype: protein_coding
description:
  Phosphate permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_29910
symbol: OKH53648.1
gene_biotype: protein_coding
description:
  Rubredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_29915
symbol: OKH53649.1
gene_biotype: protein_coding
description:
  Peptidase M61; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_30045
symbol: NIES2130_30045
gene_biotype: protein_coding
description:
  Twitching motility protein PilT; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_30070
symbol: OKH53675.1
gene_biotype: protein_coding
description:
  lipid-A-disaccharide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_30090
symbol: OKH53679.1
gene_biotype: protein_coding
description:
  Salicylate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_30095
symbol: OKH53680.1
gene_biotype: protein_coding
description:
  Thioester reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_30120
symbol: tal_3
gene_biotype: protein_coding
description:
  Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the GPI family.


ensembl_gene_id: NIES2130_30125
symbol: gnd
gene_biotype: protein_coding
description:
  6-phosphogluconate dehydrogenase (decarboxylating); Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_30145
symbol: cof_3
gene_biotype: protein_coding
description:
  Glucokinase; Incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_30235
symbol: NIES2130_30235
gene_biotype: protein_coding
description:
  Carboxymuconolactone decarboxylase; Internal stop; incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_30265
symbol: OKH53632.1
gene_biotype: protein_coding
description:
  Cytochrome C551; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_30360
symbol: OKH53458.1
gene_biotype: protein_coding
description:
  Capsule biosynthesis protein CapI; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_30365
symbol: gloB
gene_biotype: protein_coding
description:
  Hydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid.


ensembl_gene_id: NIES2130_30375
symbol: OKH53461.1
gene_biotype: protein_coding
description:
  Fmu (Sun) domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.


ensembl_gene_id: NIES2130_30390
symbol: OKH53464.1
gene_biotype: protein_coding
description:
  Signal peptide peptidase SppA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_30400
symbol: fni
gene_biotype: protein_coding
description:
  Type 2 isopentenyl-diphosphate Delta-isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).


ensembl_gene_id: NIES2130_30455
symbol: OKH53476.1
gene_biotype: protein_coding
description:
  Selenium-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_30485
symbol: OKH53489.1
gene_biotype: protein_coding
description:
  Glutathione peroxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_30495
symbol: phnC
gene_biotype: protein_coding
description:
  ABC transporter ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.


ensembl_gene_id: NIES2130_30505
symbol: phnD
gene_biotype: protein_coding
description:
  Putative selenate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_30540
symbol: xylB
gene_biotype: protein_coding
description:
  Xylulokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_30580
symbol: NIES2130_30580
gene_biotype: protein_coding
description:
  DNA methylase; Frameshifted; incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_30655
symbol: OKH53319.1
gene_biotype: protein_coding
description:
  DUF4145 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_30680
symbol: vapC
gene_biotype: protein_coding
description:
  VapC toxin family PIN domain ribonuclease; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.


ensembl_gene_id: NIES2130_30695
symbol: OKH53323.1
gene_biotype: protein_coding
description:
  DNA-binding transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_30720
symbol: OKH53328.1
gene_biotype: protein_coding
description:
  ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.


ensembl_gene_id: NIES2130_30725
symbol: OKH53329.1
gene_biotype: protein_coding
description:
  Mannitol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the mannitol dehydrogenase family.


ensembl_gene_id: NIES2130_30740
symbol: murD
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.


ensembl_gene_id: NIES2130_30745
symbol: glyS
gene_biotype: protein_coding
description:
  glycine--tRNA ligase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_30760
symbol: OKH53157.1
gene_biotype: protein_coding
description:
  Elongation factor 4; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_30835
symbol: NIES2130_30835
gene_biotype: protein_coding
description:
  Efflux transporter periplasmic adaptor subunit; Incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_30915
symbol: NIES2130_30915
gene_biotype: protein_coding
description:
  ISAs1 family transposase; Frameshifted; incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_30935
symbol: OKH53017.1
gene_biotype: protein_coding
description:
  Pirin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pirin family.


ensembl_gene_id: NIES2130_30960
symbol: OKH53021.1
gene_biotype: protein_coding
description:
  Hydroxyquinol 1,2-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_31050
symbol: lys
gene_biotype: protein_coding
description:
  Alpha/beta hydrolase; Incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_31085
symbol: NIES2130_31085
gene_biotype: protein_coding
description:
  Oxidoreductase; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_31140
symbol: NIES2130_31140
gene_biotype: protein_coding
description:
  Thiamine biosynthesis protein ThiF; Incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_31200
symbol: NIES2130_31200
gene_biotype: protein_coding
description:
  Tetratricopeptide repeat protein 38 family protein; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_31220
symbol: OKH52877.1
gene_biotype: protein_coding
description:
  Acetolactate synthase, large subunit, biosynthetic type; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_31235
symbol: OKH52880.1
gene_biotype: protein_coding
description:
  Ferrochelatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ferrochelatase family.


ensembl_gene_id: NIES2130_31310
symbol: hemA_2
gene_biotype: protein_coding
description:
  glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).


ensembl_gene_id: NIES2130_31320
symbol: NIES2130_31320
gene_biotype: protein_coding
description:
  FAD-binding protein; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_31330
symbol: hemF-3
gene_biotype: protein_coding
description:
  Coproporphyrinogen III oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_31370
symbol: leuA-3
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the alpha-IPM synthase/homocitrate synthase family.


ensembl_gene_id: NIES2130_31410
symbol: ssuC-2
gene_biotype: protein_coding
description:
  Alkanesulfonate transporter permease subunit; Part of the ABC type transport system for alkanesulfonate SsuABC; SsuB the ATP-binding subunit and SsuC the permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_31420
symbol: OKH52748.1
gene_biotype: protein_coding
description:
  Exopolyphosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_31425
symbol: ubiA
gene_biotype: protein_coding
description:
  4-hydroxybenzoate octaprenyltransferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of plastoquinone-9 (PQ-9) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 4-hydroxy-3-solanesylbenzoate. Belongs to the UbiA prenyltransferase family.


ensembl_gene_id: NIES2130_31430
symbol: OKH52750.1
gene_biotype: protein_coding
description:
  TIGR00725 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_31455
symbol: OKH52755.1
gene_biotype: protein_coding
description:
  Electron transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_31465
symbol: OKH52757.1
gene_biotype: protein_coding
description:
  PBS lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_31485
symbol: pdxJ-2
gene_biotype: protein_coding
description:
  Pyridoxine 5'-phosphate synthase; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate.


ensembl_gene_id: NIES2130_31495
symbol: maiA
gene_biotype: protein_coding
description:
  Maleylacetoacetate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_31510
symbol: OKH52766.1
gene_biotype: protein_coding
description:
  Fumarate reductase/succinate dehydrogenase flavoprotein subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_31520
symbol: OKH52767.1
gene_biotype: protein_coding
description:
  16S rRNA (cytosine(1402)-N(4))-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_31615
symbol: OKH52623.1
gene_biotype: protein_coding
description:
  Photosystem I reaction center subunit II; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_31620
symbol: trpE
gene_biotype: protein_coding
description:
  Anthranilate synthase component I; Part of a heterotetrameric complex that catalyzes the two- step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine-binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentr [...]


ensembl_gene_id: NIES2130_31630
symbol: purQ
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase I; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to assist i [...]


ensembl_gene_id: NIES2130_31670
symbol: OKH52634.1
gene_biotype: protein_coding
description:
  NACHT domain protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_31710
symbol: OKH52641.1
gene_biotype: protein_coding
description:
  Ferredoxin--nitrite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_31730
symbol: OKH52645.1
gene_biotype: protein_coding
description:
  Adenylyl-sulfate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_31735
symbol: rplY
gene_biotype: protein_coding
description:
  50S ribosomal protein L25/general stress protein Ctc; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.


ensembl_gene_id: NIES2130_31740
symbol: purA
gene_biotype: protein_coding
description:
  Adenylosuccinate synthase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.


ensembl_gene_id: NIES2130_31745
symbol: OKH52648.1
gene_biotype: protein_coding
description:
  Adenosine deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_31750
symbol: mutL
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.


ensembl_gene_id: NIES2130_31755
symbol: OKH52650.1
gene_biotype: protein_coding
description:
  Cation-efflux pump; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.


ensembl_gene_id: NIES2130_31770
symbol: OKH52653.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0060 family.


ensembl_gene_id: NIES2130_31775
symbol: mntH
gene_biotype: protein_coding
description:
  Divalent metal cation transporter; H(+)-stimulated, divalent metal cation uptake system. Belongs to the NRAMP family.


ensembl_gene_id: NIES2130_31825
symbol: thrS
gene_biotype: protein_coding
description:
  threonine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II aminoacyl-tRNA synthetase family.


ensembl_gene_id: NIES2130_31835
symbol: OKH52513.1
gene_biotype: protein_coding
description:
  Plasmid stabilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_31840
symbol: OKH52514.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.


ensembl_gene_id: NIES2130_31855
symbol: OKH52517.1
gene_biotype: protein_coding
description:
  General stress protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_31860
symbol: OKH52518.1
gene_biotype: protein_coding
description:
  Heavy metal-responsive transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_31870
symbol: OKH52520.1
gene_biotype: protein_coding
description:
  Copper-translocating P-type ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_31890
symbol: OKH52523.1
gene_biotype: protein_coding
description:
  Isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_31920
symbol: OKH52529.1
gene_biotype: protein_coding
description:
  GAF domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_31925
symbol: OKH52530.1
gene_biotype: protein_coding
description:
  3-dehydroquinate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_31935
symbol: OKH52532.1
gene_biotype: protein_coding
description:
  ATP-grasp enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_31940
symbol: OKH52533.1
gene_biotype: protein_coding
description:
  CRISPR-associated endoribonuclease Cas6; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_32080
symbol: NIES2130_32080
gene_biotype: protein_coding
description:
  Hypothetical protein; Too many ambiguous residues; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: NIES2130_32200
symbol: OKH52400.1
gene_biotype: protein_coding
description:
  Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_32270
symbol: OKH52414.1
gene_biotype: protein_coding
description:
  Cytosolic protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_32385
symbol: NIES2130_32385
gene_biotype: protein_coding
description:
  Glycosyltransferase; Incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_32390
symbol: OKH52160.1
gene_biotype: protein_coding
description:
  YraN family protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0102 family.


ensembl_gene_id: NIES2130_32400
symbol: queA
gene_biotype: protein_coding
description:
  tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).


ensembl_gene_id: NIES2130_32405
symbol: OKH52191.1
gene_biotype: protein_coding
description:
  Potassium transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_32415
symbol: OKH52164.1
gene_biotype: protein_coding
description:
  SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class I-like SAM-binding methyltransferase superfamily. gTMT family.


ensembl_gene_id: NIES2130_32420
symbol: OKH52165.1
gene_biotype: protein_coding
description:
  Homogentisate phytyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_32445
symbol: OKH52170.1
gene_biotype: protein_coding
description:
  Indolepyruvate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_32460
symbol: aao
gene_biotype: protein_coding
description:
  Amino acid oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_32495
symbol: OKH52180.1
gene_biotype: protein_coding
description:
  Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_32515
symbol: OKH52184.1
gene_biotype: protein_coding
description:
  Adenosine deaminase; Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism.


ensembl_gene_id: NIES2130_32530
symbol: coaE
gene_biotype: protein_coding
description:
  dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.


ensembl_gene_id: NIES2130_32565
symbol: OKH52063.1
gene_biotype: protein_coding
description:
  Coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: NIES2130_32590
symbol: clpP-2
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: NIES2130_32605
symbol: OKH52071.1
gene_biotype: protein_coding
description:
  Molybdopterin synthase sulfur carrier subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_32685
symbol: OKH52084.1
gene_biotype: protein_coding
description:
  IS4 family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_32760
symbol: NIES2130_32760
gene_biotype: protein_coding
description:
  TetR family transcriptional regulator; Incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_32830
symbol: psbB
gene_biotype: protein_coding
description:
  Photosystem II chlorophyll-binding protein CP47; One of the components of the core complex of photosystem II (PSII). It binds chlorophyll and helps catalyze the primary light- induced photochemical processes of PSII. PSII is a light-driven water:plastoquinone oxidoreductase, using light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation; Belongs to the PsbB/PsbC family. PsbB subfamily.


ensembl_gene_id: NIES2130_32835
symbol: psbT
gene_biotype: protein_coding
description:
  Photosystem II reaction center protein T; Seems to play a role in the dimerization of PSII. Belongs to the PsbT family.


ensembl_gene_id: NIES2130_32840
symbol: OKH51973.1
gene_biotype: protein_coding
description:
  30S ribosomal protein S1; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_32855
symbol: OKH51976.1
gene_biotype: protein_coding
description:
  Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.


ensembl_gene_id: NIES2130_32885
symbol: OKH51981.1
gene_biotype: protein_coding
description:
  Molybdenum cofactor biosynthesis protein MoeB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_32900
symbol: OKH51984.1
gene_biotype: protein_coding
description:
  Bifunctional transcriptional activator/DNA repair enzyme protein Ada; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_32950
symbol: OKH51850.1
gene_biotype: protein_coding
description:
  Putative nitrogen fixation protein NifT; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_32955
symbol: OKH51851.1
gene_biotype: protein_coding
description:
  Nitrogen fixation protein NifZ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_32970
symbol: OKH51854.1
gene_biotype: protein_coding
description:
  DUF2949 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_32985
symbol: OKH51857.1
gene_biotype: protein_coding
description:
  Zinc-binding alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_32990
symbol: OKH51858.1
gene_biotype: protein_coding
description:
  Nitrogenase cofactor biosynthesis protein NifB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_33000
symbol: OKH51880.1
gene_biotype: protein_coding
description:
  Cysteine desulfurase NifS; Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine.


ensembl_gene_id: NIES2130_33005
symbol: OKH51860.1
gene_biotype: protein_coding
description:
  Fe-S cluster assembly protein NifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.


ensembl_gene_id: NIES2130_33010
symbol: OKH51861.1
gene_biotype: protein_coding
description:
  Group 1 truncated hemoglobin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_33020
symbol: OKH51863.1
gene_biotype: protein_coding
description:
  Nitrogenase molybdenum-iron protein alpha chain; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_33105
symbol: NIES2130_33105
gene_biotype: protein_coding
description:
  Nucleic acid-binding protein; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_33120
symbol: NIES2130_33120
gene_biotype: protein_coding
description:
  Fatty-acid oxidation protein subunit alpha; Incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_33145
symbol: OKH51758.1
gene_biotype: protein_coding
description:
  Branched-chain alpha-keto acid dehydrogenase subunit E2; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_33155
symbol: OKH51760.1
gene_biotype: protein_coding
description:
  Methyltransferase type 11; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_33180
symbol: rtcB
gene_biotype: protein_coding
description:
  RNA-splicing ligase RtcB; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the RtcB family.


ensembl_gene_id: NIES2130_33185
symbol: OKH51766.1
gene_biotype: protein_coding
description:
  Cyclic phosphodiesterase-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_33190
symbol: OKH51767.1
gene_biotype: protein_coding
description:
  Cobalamin biosynthesis protein P47K; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_33205
symbol: OKH51770.1
gene_biotype: protein_coding
description:
  Ammonium transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_33250
symbol: OKH51785.1
gene_biotype: protein_coding
description:
  RNA-splicing ligase RtcB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_33315
symbol: OKH51652.1
gene_biotype: protein_coding
description:
  Molybdopterin synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_33330
symbol: clpS-2
gene_biotype: protein_coding
description:
  Clp protease ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.


ensembl_gene_id: NIES2130_33335
symbol: OKH51681.1
gene_biotype: protein_coding
description:
  FAD-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_33395
symbol: OKH51667.1
gene_biotype: protein_coding
description:
  Anion transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_33410
symbol: recR
gene_biotype: protein_coding
description:
  Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.


ensembl_gene_id: NIES2130_33430
symbol: OKH51673.1
gene_biotype: protein_coding
description:
  Histidine triad nucleotide-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_33435
symbol: OKH51674.1
gene_biotype: protein_coding
description:
  Magnesium chelatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_33440
symbol: OKH51682.1
gene_biotype: protein_coding
description:
  TRAP ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_33455
symbol: OKH51677.1
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_33460
symbol: OKH51678.1
gene_biotype: protein_coding
description:
  CdaR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_33505
symbol: OKH51549.1
gene_biotype: protein_coding
description:
  Riboflavin synthase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_33515
symbol: OKH51551.1
gene_biotype: protein_coding
description:
  biotin--[acetyl-CoA-carboxylase] ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_33520
symbol: OKH51552.1
gene_biotype: protein_coding
description:
  Laccase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the multicopper oxidase YfiH/RL5 family.


ensembl_gene_id: NIES2130_33555
symbol: NIES2130_33555
gene_biotype: protein_coding
description:
  Transcriptional regulator; Internal stop; incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_33585
symbol: NIES2130_33585
gene_biotype: protein_coding
description:
  Alcohol dehydrogenase; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_33600
symbol: NIES2130_33600
gene_biotype: protein_coding
description:
  Aldo/keto reductase; Frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_33620
symbol: OKH51577.1
gene_biotype: protein_coding
description:
  Rubrerythrin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_33640
symbol: OKH51578.1
gene_biotype: protein_coding
description:
  Polysaccharide pyruvyl transferase CsaB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_33660
symbol: hisA
gene_biotype: protein_coding
description:
  1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_33685
symbol: OKH51580.1
gene_biotype: protein_coding
description:
  Phosphate transport system regulatory protein PhoU; Plays a role in the regulation of phosphate uptake.


ensembl_gene_id: NIES2130_33745
symbol: leuS
gene_biotype: protein_coding
description:
  leucine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: NIES2130_33780
symbol: OKH51447.1
gene_biotype: protein_coding
description:
  RNA polymerase subunit sigma; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: NIES2130_33790
symbol: OKH51449.1
gene_biotype: protein_coding
description:
  Competence protein ComFB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_33805
symbol: NIES2130_33805
gene_biotype: protein_coding
description:
  Transposase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.


ensembl_gene_id: NIES2130_33810
symbol: OKH51452.1
gene_biotype: protein_coding
description:
  RNA-binding protein hfq; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_33815
symbol: dapF-2
gene_biotype: protein_coding
description:
  Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.


ensembl_gene_id: NIES2130_33850
symbol: NIES2130_33850
gene_biotype: protein_coding
description:
  Transposase; Frameshifted; internal stop; incomplete; partial in the middle of a contig; missing start and stop; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0234 family.


ensembl_gene_id: NIES2130_33855
symbol: OKH51331.1
gene_biotype: protein_coding
description:
  MAPEG family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_33860
symbol: OKH51332.1
gene_biotype: protein_coding
description:
  DNA recombination-mediator protein A; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_33870
symbol: NIES2130_33870
gene_biotype: protein_coding
description:
  PadR family transcriptional regulator; Incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_33885
symbol: OKH51335.1
gene_biotype: protein_coding
description:
  Molybdenum cofactor biosynthesis protein MoaA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_33895
symbol: dnaX
gene_biotype: protein_coding
description:
  DNA polymerase III, subunit gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: NIES2130_33940
symbol: OKH51346.1
gene_biotype: protein_coding
description:
  SprT-like family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_33945
symbol: OKH51347.1
gene_biotype: protein_coding
description:
  Malto-oligosyltrehalose synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_33950
symbol: OKH51348.1
gene_biotype: protein_coding
description:
  Malto-oligosyltrehalose trehalohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_33995
symbol: OKH50507.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ComB family.


ensembl_gene_id: NIES2130_34010
symbol: atpB
gene_biotype: protein_coding
description:
  F0F1 ATP synthase subunit A; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.


ensembl_gene_id: NIES2130_34015
symbol: atpE
gene_biotype: protein_coding
description:
  ATP synthase F0 subunit C; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: NIES2130_34020
symbol: atpG
gene_biotype: protein_coding
description:
  F0F1 ATP synthase subunit B; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0). The b'-subunit is a diverged and duplicated form of b found in plants and photosynthetic bacteria. Belongs to the ATPase B chain family.


ensembl_gene_id: NIES2130_34025
symbol: atpF
gene_biotype: protein_coding
description:
  F0F1 ATP synthase subunit B; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.


ensembl_gene_id: NIES2130_34030
symbol: atpH
gene_biotype: protein_coding
description:
  F0F1 ATP synthase subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: NIES2130_34035
symbol: atpA
gene_biotype: protein_coding
description:
  F0F1 ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.


ensembl_gene_id: NIES2130_34040
symbol: atpG-2
gene_biotype: protein_coding
description:
  F0F1 ATP synthase subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.


ensembl_gene_id: NIES2130_34110
symbol: OKH50528.1
gene_biotype: protein_coding
description:
  Dicarboxylate/amino acid:cation symporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: NIES2130_34115
symbol: OKH50529.1
gene_biotype: protein_coding
description:
  DNA polymerase III subunit alpha; Main replicative polymerase; these cyanobacterial enzymes contain C-terminal split inteins; they are joined with the C-terminal fragments that contain N-terminal inteins that are encoded elsewhere in the genome; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_34215
symbol: rpoZ
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.


ensembl_gene_id: NIES2130_34265
symbol: OKH50433.1
gene_biotype: protein_coding
description:
  Amidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the amidase family.


ensembl_gene_id: NIES2130_34290
symbol: OKH50436.1
gene_biotype: protein_coding
description:
  5,10-methylenetetrahydrofolate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the methylenetetrahydrofolate reductase family.


ensembl_gene_id: NIES2130_34295
symbol: trpS
gene_biotype: protein_coding
description:
  tryptophan--tRNA ligase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: NIES2130_34320
symbol: thiE
gene_biotype: protein_coding
description:
  Thiamine-phosphate diphosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.


ensembl_gene_id: NIES2130_34325
symbol: OKH50333.1
gene_biotype: protein_coding
description:
  Thiamine biosynthesis protein ThiS; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_34355
symbol: OKH50339.1
gene_biotype: protein_coding
description:
  Phosphoribosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_34375
symbol: NIES2130_34375
gene_biotype: protein_coding
description:
  Apocarotenoid-15,15'-oxygenase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_34420
symbol: NIES2130_34420
gene_biotype: protein_coding
description:
  Alpha-glucosidase; Incomplete; partial in the middle of a contig; missing start and stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_34460
symbol: NIES2130_34460
gene_biotype: protein_coding
description:
  NTPase (NACHT family); Incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_34480
symbol: OKH49813.1
gene_biotype: protein_coding
description:
  Pyruvate:ferredoxin (flavodoxin) oxidoreductase; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin.


ensembl_gene_id: NIES2130_34485
symbol: OKH49814.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S41A family.


ensembl_gene_id: NIES2130_34510
symbol: OKH49819.1
gene_biotype: protein_coding
description:
  Translation initiation factor; Involved in start site selection during the initiation of translation; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_34515
symbol: OKH49820.1
gene_biotype: protein_coding
description:
  Methyltransferase type 12; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_34535
symbol: OKH49839.1
gene_biotype: protein_coding
description:
  Rhodanese; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_34540
symbol: repA
gene_biotype: protein_coding
description:
  Replication protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_34560
symbol: pdxA
gene_biotype: protein_coding
description:
  4-hydroxythreonine-4-phosphate dehydrogenase PdxA; Catalyzes the NAD(P)-dependent oxidation of 4-(phosphooxy)-L- threonine (HTP) into 2-amino-3-oxo-4-(phosphooxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP).


ensembl_gene_id: NIES2130_34565
symbol: petM
gene_biotype: protein_coding
description:
  Cytochrome B6; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions.


ensembl_gene_id: NIES2130_34620
symbol: OKH49838.1
gene_biotype: protein_coding
description:
  Dihydrolipoyl dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_34630
symbol: OKH49718.1
gene_biotype: protein_coding
description:
  KGK family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_34645
symbol: OKH49721.1
gene_biotype: protein_coding
description:
  DUF4089 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_34650
symbol: OKH49722.1
gene_biotype: protein_coding
description:
  Amidase; Catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_34665
symbol: OKH49725.1
gene_biotype: protein_coding
description:
  YbaB/EbfC family nucleoid-associated protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.


ensembl_gene_id: NIES2130_34670
symbol: OKH49726.1
gene_biotype: protein_coding
description:
  Protein tyrosine phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.


ensembl_gene_id: NIES2130_34685
symbol: nadD-2
gene_biotype: protein_coding
description:
  Nicotinate (nicotinamide) nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).


ensembl_gene_id: NIES2130_34695
symbol: thiL
gene_biotype: protein_coding
description:
  Thiamine-phosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family.


ensembl_gene_id: NIES2130_34700
symbol: OKH49744.1
gene_biotype: protein_coding
description:
  Succinyldiaminopimelate aminotransferase; Catalyzes the formation of N-succinyl-2-L-amino-6-oxoheptanedioate and L-glutamate from N-succinyl-L-2,6-diaminoheptanedioate and 2-oxoglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_34705
symbol: OKH49732.1
gene_biotype: protein_coding
description:
  Thiol reductase thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thioredoxin family.


ensembl_gene_id: NIES2130_34715
symbol: OKH49734.1
gene_biotype: protein_coding
description:
  Phage shock protein A; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_34735
symbol: menB
gene_biotype: protein_coding
description:
  1,4-dihydroxy-2-naphthoyl-CoA synthase; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA); Belongs to the enoyl-CoA hydratase/isomerase family. MenB subfamily.


ensembl_gene_id: NIES2130_34745
symbol: NIES2130_34745
gene_biotype: protein_coding
description:
  NTPase KAP; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_34755
symbol: radA
gene_biotype: protein_coding
description:
  DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.


ensembl_gene_id: NIES2130_34770
symbol: OKH49380.1
gene_biotype: protein_coding
description:
  Peroxidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cytochrome P450 family.


ensembl_gene_id: NIES2130_34780
symbol: OKH49382.1
gene_biotype: protein_coding
description:
  Cobaltochelatase subunit CobN; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_34785
symbol: OKH49383.1
gene_biotype: protein_coding
description:
  Cell wall-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_34800
symbol: gpsA
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate dehydrogenase; Catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: NIES2130_34850
symbol: NIES2130_34850
gene_biotype: protein_coding
description:
  Translocation protein TolB; Frameshifted; too many ambiguous residues; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_34905
symbol: OKH49294.1
gene_biotype: protein_coding
description:
  Maltose alpha-D-glucosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_34965
symbol: NIES2130_34965
gene_biotype: protein_coding
description:
  Macrolide ABC transporter ATP-binding protein; Incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_34990
symbol: OKH48966.1
gene_biotype: protein_coding
description:
  Alanine--glyoxylate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_35035
symbol: mnmG
gene_biotype: protein_coding
description:
  tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.


ensembl_gene_id: NIES2130_35040
symbol: OKH48975.1
gene_biotype: protein_coding
description:
  Peptidase M15; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_35050
symbol: NIES2130_35050
gene_biotype: protein_coding
description:
  Fatty-acid oxidation protein subunit alpha; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_35065
symbol: OKH48979.1
gene_biotype: protein_coding
description:
  TIGR04376 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_35070
symbol: lgt
gene_biotype: protein_coding
description:
  Diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins.


ensembl_gene_id: NIES2130_35100
symbol: ppaC
gene_biotype: protein_coding
description:
  Integrase; Frameshifted; incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_35150
symbol: OKH48890.1
gene_biotype: protein_coding
description:
  Calcium sensor EFh; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_35155
symbol: OKH48904.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 'phage' integrase family.


ensembl_gene_id: NIES2130_35220
symbol: OKH48575.1
gene_biotype: protein_coding
description:
  Sulfite oxidase-like oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_35225
symbol: rpmF
gene_biotype: protein_coding
description:
  50S ribosomal protein L32; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL32 family.


ensembl_gene_id: NIES2130_35245
symbol: rnj
gene_biotype: protein_coding
description:
  Ribonuclease J; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay.


ensembl_gene_id: NIES2130_35250
symbol: dapA
gene_biotype: protein_coding
description:
  4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).


ensembl_gene_id: NIES2130_35255
symbol: asd
gene_biotype: protein_coding
description:
  Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.


ensembl_gene_id: NIES2130_35260
symbol: tig
gene_biotype: protein_coding
description:
  Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.


ensembl_gene_id: NIES2130_35270
symbol: clpC
gene_biotype: protein_coding
description:
  ATP-dependent protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.


ensembl_gene_id: NIES2130_35330
symbol: OKH48596.1
gene_biotype: protein_coding
description:
  TIGR04168 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_35335
symbol: nadA
gene_biotype: protein_coding
description:
  Quinolinate synthase; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.


ensembl_gene_id: NIES2130_35400
symbol: OKH48303.1
gene_biotype: protein_coding
description:
  VanZ family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_35430
symbol: OKH48292.1
gene_biotype: protein_coding
description:
  Dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.


ensembl_gene_id: NIES2130_35445
symbol: alaS
gene_biotype: protein_coding
description:
  alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.


ensembl_gene_id: NIES2130_35450
symbol: OKH48296.1
gene_biotype: protein_coding
description:
  Heavy metal transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_35455
symbol: OKH48297.1
gene_biotype: protein_coding
description:
  GGDEF domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_35460
symbol: OKH48298.1
gene_biotype: protein_coding
description:
  ATP-dependent Zn protease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_35530
symbol: murJ
gene_biotype: protein_coding
description:
  Murein biosynthesis integral membrane protein MurJ; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.


ensembl_gene_id: NIES2130_35545
symbol: crcB
gene_biotype: protein_coding
description:
  Camphor resistance protein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.


ensembl_gene_id: NIES2130_35550
symbol: crcB-2
gene_biotype: protein_coding
description:
  Chromosome condensation protein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.


ensembl_gene_id: NIES2130_35580
symbol: OKH48194.1
gene_biotype: protein_coding
description:
  IS630 family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_35610
symbol: OKH48199.1
gene_biotype: protein_coding
description:
  DUF429 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_35650
symbol: OKH47972.1
gene_biotype: protein_coding
description:
  Metal ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 9 family.


ensembl_gene_id: NIES2130_35655
symbol: OKH47973.1
gene_biotype: protein_coding
description:
  Manganese ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_35665
symbol: OKH47974.1
gene_biotype: protein_coding
description:
  PEP-CTERM domain protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_35675
symbol: OKH47976.1
gene_biotype: protein_coding
description:
  Nuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_35685
symbol: OKH47978.1
gene_biotype: protein_coding
description:
  Phosphopeptide-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_35695
symbol: OKH47980.1
gene_biotype: protein_coding
description:
  D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_35745
symbol: OKH47907.1
gene_biotype: protein_coding
description:
  Adenylosuccinate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.


ensembl_gene_id: NIES2130_35750
symbol: OKH47887.1
gene_biotype: protein_coding
description:
  DNA topoisomerase I; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_35760
symbol: OKH47889.1
gene_biotype: protein_coding
description:
  Ribonuclease BN; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_35790
symbol: NIES2130_35790
gene_biotype: protein_coding
description:
  Glycosyl transferase; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_35795
symbol: OKH47895.1
gene_biotype: protein_coding
description:
  Lipopolysaccharide heptosyltransferase II; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_35800
symbol: hldE
gene_biotype: protein_coding
description:
  Bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose. In the N-terminal section; belongs to the carbohydrate kinase PfkB family.


ensembl_gene_id: NIES2130_35815
symbol: gmhA
gene_biotype: protein_coding
description:
  Phosphoheptose isomerase; Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate; Belongs to the SIS family. GmhA subfamily.


ensembl_gene_id: NIES2130_35820
symbol: OKH47900.1
gene_biotype: protein_coding
description:
  LPS biosynthesis transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_35875
symbol: OKH47594.1
gene_biotype: protein_coding
description:
  Molybdenum cofactor biosynthesis protein; May be involved in the biosynthesis of molybdopterin. Belongs to the MoaB/Mog family.


ensembl_gene_id: NIES2130_35885
symbol: dtd
gene_biotype: protein_coding
description:
  D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family.


ensembl_gene_id: NIES2130_35895
symbol: cysS
gene_biotype: protein_coding
description:
  cysteine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: NIES2130_35905
symbol: NIES2130_35905
gene_biotype: protein_coding
description:
  Four helix bundle protein; Frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_35910
symbol: OKH47600.1
gene_biotype: protein_coding
description:
  Zn-dependent protease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_35925
symbol: coaD
gene_biotype: protein_coding
description:
  Pantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.


ensembl_gene_id: NIES2130_35930
symbol: lgt-2
gene_biotype: protein_coding
description:
  Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.


ensembl_gene_id: NIES2130_35935
symbol: OKH47604.1
gene_biotype: protein_coding
description:
  Precorrin-4 C(11)-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the precorrin methyltransferase family.


ensembl_gene_id: NIES2130_35960
symbol: rlmN
gene_biotype: protein_coding
description:
  23S rRNA (adenine(2503)-C(2))-methyltransferase; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family.


ensembl_gene_id: NIES2130_35965
symbol: OKH47617.1
gene_biotype: protein_coding
description:
  Replication restart DNA helicase PriA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_35980
symbol: OKH47609.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the globin family.


ensembl_gene_id: NIES2130_35990
symbol: uvrC
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.


ensembl_gene_id: NIES2130_36045
symbol: OKH47355.1
gene_biotype: protein_coding
description:
  Deoxyribodipyrimidine photolyase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_36055
symbol: OKH47357.1
gene_biotype: protein_coding
description:
  IscS subfamily cysteine desulfurase; Catalyzes the removal of elemental sulfur from cysteine to produce alanine; involved in NAD biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: NIES2130_36060
symbol: OKH47358.1
gene_biotype: protein_coding
description:
  Amidoligase enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_36075
symbol: OKH47361.1
gene_biotype: protein_coding
description:
  Peptidase S41; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_36085
symbol: NIES2130_36085
gene_biotype: protein_coding
description:
  Alpha-amlyase; Incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_36130
symbol: ilvE
gene_biotype: protein_coding
description:
  Amino acid aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_36165
symbol: OKH47269.1
gene_biotype: protein_coding
description:
  Prevent-host-death family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_36175
symbol: NIES2130_36175
gene_biotype: protein_coding
description:
  Flagellar assembly protein H; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_36195
symbol: OKH47051.1
gene_biotype: protein_coding
description:
  Thiosulfate reductase cytochrome B subunit (membrane anchoring protein); Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_36220
symbol: OKH47056.1
gene_biotype: protein_coding
description:
  Magnesium protoporphyrin IX methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_36225
symbol: OKH47057.1
gene_biotype: protein_coding
description:
  N-acetylglucosamine-6-phosphate deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_36230
symbol: purE
gene_biotype: protein_coding
description:
  5-(carboxyamino)imidazole ribonucleotide mutase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).


ensembl_gene_id: NIES2130_36240
symbol: OKH47070.1
gene_biotype: protein_coding
description:
  Ammonia channel protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_36250
symbol: ispH
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.


ensembl_gene_id: NIES2130_36275
symbol: miaB
gene_biotype: protein_coding
description:
  tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.


ensembl_gene_id: NIES2130_36285
symbol: ddl
gene_biotype: protein_coding
description:
  D-alanine--D-alanine ligase A; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.


ensembl_gene_id: NIES2130_36350
symbol: trmFO
gene_biotype: protein_coding
description:
  methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO; Catalyzes the folate-dependent formation of 5-methyl-uridine at position 54 (M-5-U54) in all tRNAs; Belongs to the MnmG family. TrmFO subfamily.


ensembl_gene_id: NIES2130_36395
symbol: OKH46759.1
gene_biotype: protein_coding
description:
  6-pyruvoyl tetrahydropterin synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_36420
symbol: phhB
gene_biotype: protein_coding
description:
  4a-hydroxytetrahydrobiopterin dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_36425
symbol: OKH46764.1
gene_biotype: protein_coding
description:
  Photosystem II D2 protein (photosystem q(a) protein); Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_36450
symbol: glpK
gene_biotype: protein_coding
description:
  Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.


ensembl_gene_id: NIES2130_36470
symbol: trpB-1
gene_biotype: protein_coding
description:
  TrpB-like pyridoxal-phosphate dependent enzyme; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.


ensembl_gene_id: NIES2130_36485
symbol: OKH46779.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose. In the N-terminal section; belongs to the carbohydrate kinase PfkB family.


ensembl_gene_id: NIES2130_36505
symbol: OKH46776.1
gene_biotype: protein_coding
description:
  Bacitracin resistance protein BacA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the globin family.


ensembl_gene_id: NIES2130_36515
symbol: NIES2130_36515
gene_biotype: protein_coding
description:
  IS630 family transposase; Incomplete; partial in the middle of a contig; missing start and stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_36525
symbol: OKH46525.1
gene_biotype: protein_coding
description:
  (p)ppGpp synthetase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.


ensembl_gene_id: NIES2130_36590
symbol: ilvA
gene_biotype: protein_coding
description:
  Transposase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA.


ensembl_gene_id: NIES2130_36600
symbol: OKH46538.1
gene_biotype: protein_coding
description:
  Iron-regulated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_36615
symbol: fabG_2
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: NIES2130_36655
symbol: corA
gene_biotype: protein_coding
description:
  Magnesium and cobalt transport protein CorA; Mediates influx of magnesium ions. Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.


ensembl_gene_id: NIES2130_36685
symbol: OKH46296.1
gene_biotype: protein_coding
description:
  Riboflavin deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_36700
symbol: OKH46294.1
gene_biotype: protein_coding
description:
  Beta-propeller domain-containing protein, methanol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_36730
symbol: OKH46053.1
gene_biotype: protein_coding
description:
  Exostosin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_36750
symbol: OKH46056.1
gene_biotype: protein_coding
description:
  Hemolytic protein HlpA-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_36755
symbol: OKH46057.1
gene_biotype: protein_coding
description:
  O-unit flippase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_36780
symbol: aspS
gene_biotype: protein_coding
description:
  aspartate--tRNA ligase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.


ensembl_gene_id: NIES2130_36790
symbol: htpX
gene_biotype: protein_coding
description:
  Protease HtpX; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase M48B family.


ensembl_gene_id: NIES2130_36810
symbol: hslO
gene_biotype: protein_coding
description:
  Hsp33 family molecular chaperone; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress.


ensembl_gene_id: NIES2130_36830
symbol: menH
gene_biotype: protein_coding
description:
  2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase; Catalyzes a proton abstraction reaction that results in 2,5- elimination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC) and the formation of 2-succinyl-6- hydroxy-2,4-cyclohexadiene-1-carboxylate (SHCHC); Belongs to the AB hydrolase superfamily. MenH family.


ensembl_gene_id: NIES2130_36870
symbol: OKH46010.1
gene_biotype: protein_coding
description:
  Cobalamin biosynthesis protein CbiG; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_36900
symbol: purK
gene_biotype: protein_coding
description:
  5-(carboxyamino)imidazole ribonucleotide synthase; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR).


ensembl_gene_id: NIES2130_36935
symbol: OKH45788.1
gene_biotype: protein_coding
description:
  Fructose-bisphosphatase, class II; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FBPase class 2 family.


ensembl_gene_id: NIES2130_36995
symbol: pgi
gene_biotype: protein_coding
description:
  Glucose-6-phosphate isomerase; Functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GPI family.


ensembl_gene_id: NIES2130_37000
symbol: OKH45801.1
gene_biotype: protein_coding
description:
  dTDP-4-dehydrorhamnose 3,5-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_37035
symbol: NIES2130_37035
gene_biotype: protein_coding
description:
  IS1 transposase; Frameshifted; incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_37075
symbol: ispG
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family.


ensembl_gene_id: NIES2130_37090
symbol: OKH45588.1
gene_biotype: protein_coding
description:
  DDE transposase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_37120
symbol: OKH45594.1
gene_biotype: protein_coding
description:
  Elongation factor G; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_37160
symbol: OKH45509.1
gene_biotype: protein_coding
description:
  Peptidase M42; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_37270
symbol: degT
gene_biotype: protein_coding
description:
  Cys/Met metabolism pyridoxal-phosphate-dependent enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DegT/DnrJ/EryC1 family.


ensembl_gene_id: NIES2130_37275
symbol: OKH45457.1
gene_biotype: protein_coding
description:
  Iron export ABC transporter permease subunit FetB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_37290
symbol: OKH45460.1
gene_biotype: protein_coding
description:
  CoA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_37335
symbol: NIES2130_37335
gene_biotype: protein_coding
description:
  ISAs1 family transposase; Incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_37345
symbol: OKH45276.1
gene_biotype: protein_coding
description:
  Homocitrate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_37400
symbol: OKH45091.1
gene_biotype: protein_coding
description:
  Conjugal transfer protein TrbI; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_37440
symbol: serS
gene_biotype: protein_coding
description:
  serine--tRNA ligase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).


ensembl_gene_id: NIES2130_37445
symbol: OKH45100.1
gene_biotype: protein_coding
description:
  RIP metalloprotease RseP; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_37450
symbol: nth
gene_biotype: protein_coding
description:
  Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.


ensembl_gene_id: NIES2130_37455
symbol: rpsN
gene_biotype: protein_coding
description:
  30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.


ensembl_gene_id: NIES2130_37465
symbol: aat
gene_biotype: protein_coding
description:
  leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine.


ensembl_gene_id: NIES2130_37505
symbol: OKH44921.1
gene_biotype: protein_coding
description:
  Carboxynorspermidine decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_37525
symbol: OKH44925.1
gene_biotype: protein_coding
description:
  Methylmalonate-semialdehyde dehydrogenase (acylating); Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_37540
symbol: argS
gene_biotype: protein_coding
description:
  arginine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_37545
symbol: OKH44928.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Nudix hydrolase family.


ensembl_gene_id: NIES2130_37550
symbol: OKH44929.1
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide diphosphorylase (carboxylating); Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NadC/ModD family.


ensembl_gene_id: NIES2130_37565
symbol: OKH44860.1
gene_biotype: protein_coding
description:
  Protease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_37600
symbol: NIES2130_37600
gene_biotype: protein_coding
description:
  Cyclase; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_37680
symbol: OKH44777.1
gene_biotype: protein_coding
description:
  3-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_37775
symbol: OKH44719.1
gene_biotype: protein_coding
description:
  Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 'phage' integrase family.


ensembl_gene_id: NIES2130_37835
symbol: purU
gene_biotype: protein_coding
description:
  Formyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4).


ensembl_gene_id: NIES2130_37885
symbol: NIES2130_37885
gene_biotype: protein_coding
description:
  Aspartyl protease; Incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_37920
symbol: mdh
gene_biotype: protein_coding
description:
  Transposase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.


ensembl_gene_id: NIES2130_37935
symbol: mutM
gene_biotype: protein_coding
description:
  DNA-formamidopyrimidine glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates.


ensembl_gene_id: NIES2130_37940
symbol: psaE
gene_biotype: protein_coding
description:
  Photosystem I reaction center subunit IV; Stabilizes the interaction between PsaC and the PSI core, assists the docking of the ferredoxin to PSI and interacts with ferredoxin-NADP oxidoreductase; Belongs to the PsaE family.


ensembl_gene_id: NIES2130_37955
symbol: mraY
gene_biotype: protein_coding
description:
  phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.


ensembl_gene_id: NIES2130_37980
symbol: OKH44370.1
gene_biotype: protein_coding
description:
  Ubiquinol-cytochrome C reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_37995
symbol: mreB
gene_biotype: protein_coding
description:
  Rod shape-determining protein; Functions in MreBCD complex in some organisms; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_38000
symbol: OKH44374.1
gene_biotype: protein_coding
description:
  Rod shape-determining protein MreC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_38005
symbol: OKH44375.1
gene_biotype: protein_coding
description:
  Rod shape-determining protein MreD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_38010
symbol: OKH44376.1
gene_biotype: protein_coding
description:
  Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.


ensembl_gene_id: NIES2130_38060
symbol: OKH44270.1
gene_biotype: protein_coding
description:
  23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: NIES2130_38065
symbol: mrnC
gene_biotype: protein_coding
description:
  Ribonuclease III; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family.


ensembl_gene_id: NIES2130_38075
symbol: carA
gene_biotype: protein_coding
description:
  Carbamoyl phosphate synthase small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CarA family.


ensembl_gene_id: NIES2130_38120
symbol: OKH44170.1
gene_biotype: protein_coding
description:
  Nitrogenase molybdenum-iron protein subunit beta; This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation; Belongs to the NifD/NifK/NifE/NifN family.


ensembl_gene_id: NIES2130_38130
symbol: nifE
gene_biotype: protein_coding
description:
  Nitrogenase iron-molybdenum cofactor biosynthesis protein NifE; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NifD/NifK/NifE/NifN family.


ensembl_gene_id: NIES2130_38135
symbol: OKH44172.1
gene_biotype: protein_coding
description:
  Nitrogenase iron-molybdenum cofactor biosynthesis protein NifN; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NifD/NifK/NifE/NifN family.


ensembl_gene_id: NIES2130_38140
symbol: OKH44173.1
gene_biotype: protein_coding
description:
  Nitrogen fixation protein NifX; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_38155
symbol: nifW
gene_biotype: protein_coding
description:
  Nitrogenase stabilizing/protective protein; May protect the nitrogenase Fe-Mo protein from oxidative damage; Belongs to the NifW family.


ensembl_gene_id: NIES2130_38160
symbol: OKH44177.1
gene_biotype: protein_coding
description:
  Protein hesA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_38170
symbol: OKH44179.1
gene_biotype: protein_coding
description:
  Fe-S cluster assembly protein HesB; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HesB/IscA family.


ensembl_gene_id: NIES2130_38180
symbol: OKH44181.1
gene_biotype: protein_coding
description:
  Ferrous iron transport protein A; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_38200
symbol: hisZ
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase regulatory subunit; Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine.


ensembl_gene_id: NIES2130_38240
symbol: murE
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily.


ensembl_gene_id: NIES2130_38255
symbol: OKH44050.1
gene_biotype: protein_coding
description:
  N-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_38340
symbol: OKH43932.1
gene_biotype: protein_coding
description:
  Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the transketolase family.


ensembl_gene_id: NIES2130_38370
symbol: NIES2130_38370
gene_biotype: protein_coding
description:
  GNAT family N-acetyltransferase; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: NIES2130_38435
symbol: OKH43848.1
gene_biotype: protein_coding
description:
  RNA pseudouridine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_38440
symbol: OKH43849.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: NIES2130_38540
symbol: OKH43674.1
gene_biotype: protein_coding
description:
  Phosphate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_38550
symbol: carB
gene_biotype: protein_coding
description:
  Carbamoyl phosphate synthase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CarB family.


ensembl_gene_id: NIES2130_38565
symbol: OKH43682.1
gene_biotype: protein_coding
description:
  (Fe-S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_38570
symbol: OKH43679.1
gene_biotype: protein_coding
description:
  Phosphonate ABC transporter, permease protein PhnE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_38575
symbol: phnC-2
gene_biotype: protein_coding
description:
  Phosphonate ABC transporter ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.


ensembl_gene_id: NIES2130_38610
symbol: NIES2130_38610
gene_biotype: protein_coding
description:
  Proton extrusion protein PcxA; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.


ensembl_gene_id: NIES2130_38645
symbol: OKH43602.1
gene_biotype: protein_coding
description:
  IS5 family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_38660
symbol: NIES2130_38660
gene_biotype: protein_coding
description:
  Peptidase M23; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_38670
symbol: OKH43512.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ParB family.


ensembl_gene_id: NIES2130_38715
symbol: NIES2130_38715
gene_biotype: protein_coding
description:
  IS5 family transposase; Incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_38750
symbol: NIES2130_38750
gene_biotype: protein_coding
description:
  DUF455 domain-containing protein; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_38760
symbol: OKH43438.1
gene_biotype: protein_coding
description:
  Type I glutamate--ammonia ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_38780
symbol: NIES2130_38780
gene_biotype: protein_coding
description:
  Aldehyde dehydrogenase; Incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_38815
symbol: OKH43380.1
gene_biotype: protein_coding
description:
  Phosphoglycolate phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_38830
symbol: ndhJ
gene_biotype: protein_coding
description:
  NADH dehydrogenase; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.


ensembl_gene_id: NIES2130_38840
symbol: ndhC
gene_biotype: protein_coding
description:
  NAD(P)H-quinone oxidoreductase subunit 3; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.


ensembl_gene_id: NIES2130_38845
symbol: hoxR
gene_biotype: protein_coding
description:
  Rubredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the rubredoxin family.


ensembl_gene_id: NIES2130_38850
symbol: OKH43331.1
gene_biotype: protein_coding
description:
  Photosystem II assembly protein; Unknown. The ortholog in A.thaliana is involved in photosystem II (PSII) assembly, but knockout of the corresponding gene in Synechoccus PCC 7002 has no effect on PSII activity.


ensembl_gene_id: NIES2130_38855
symbol: psbE
gene_biotype: protein_coding
description:
  Cytochrome b559 subunit alpha; This b-type cytochrome is tightly associated with the reaction center of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation.


ensembl_gene_id: NIES2130_38860
symbol: OKH43333.1
gene_biotype: protein_coding
description:
  Cytochrome b559 subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_38865
symbol: OKH43334.1
gene_biotype: protein_coding
description:
  Photosystem II reaction center protein L; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_38870
symbol: OKH43335.1
gene_biotype: protein_coding
description:
  Photosystem II reaction center protein J; May be involved in assembling and maintaining PSII complexes in the thylakoid membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_38890
symbol: NIES2130_38890
gene_biotype: protein_coding
description:
  Transposase; Internal stop; incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_38915
symbol: OKH43247.1
gene_biotype: protein_coding
description:
  Cobalt ABC transporter; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Methionine importer (TC 3.A.1.24) family.


ensembl_gene_id: NIES2130_38935
symbol: OKH43251.1
gene_biotype: protein_coding
description:
  Monothiol glutaredoxin, Grx4 family; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutaredoxin family. Monothiol subfamily.


ensembl_gene_id: NIES2130_38940
symbol: OKH43252.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the BolA/IbaG family.


ensembl_gene_id: NIES2130_38965
symbol: tadA
gene_biotype: protein_coding
description:
  tRNA-specific adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: NIES2130_38990
symbol: OKH43185.1
gene_biotype: protein_coding
description:
  Nickel transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_38995
symbol: OKH43179.1
gene_biotype: protein_coding
description:
  Basic amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: NIES2130_39000
symbol: OKH43180.1
gene_biotype: protein_coding
description:
  Polar amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_39020
symbol: NIES2130_39020
gene_biotype: protein_coding
description:
  GNAT family N-acetyltransferase; Phototransformation of protochlorophyllide (Pchlide) to chlorophyllide (Chlide).


ensembl_gene_id: NIES2130_39045
symbol: OKH43136.1
gene_biotype: protein_coding
description:
  Pyruvate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_39065
symbol: OKH43140.1
gene_biotype: protein_coding
description:
  Chromosome partitioning protein ParB; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ParB family.


ensembl_gene_id: NIES2130_39110
symbol: nanE
gene_biotype: protein_coding
description:
  Diguanylate cyclase; Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N- acetylglucosamine-6-phosphate (GlcNAc-6-P).


ensembl_gene_id: NIES2130_39150
symbol: NIES2130_39150
gene_biotype: protein_coding
description:
  Camphor resistance protein CrcB; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_39205
symbol: NIES2130_39205
gene_biotype: protein_coding
description:
  NADPH-dependent FMN reductase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_39210
symbol: OKH42991.1
gene_biotype: protein_coding
description:
  NmrA family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_39240
symbol: OKH42950.1
gene_biotype: protein_coding
description:
  TIGR03643 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_39250
symbol: NIES2130_39250
gene_biotype: protein_coding
description:
  HNH endonuclease; Incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_39290
symbol: OKH42900.1
gene_biotype: protein_coding
description:
  Toxin of toxin-antitoxin system; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_39335
symbol: OKH42857.1
gene_biotype: protein_coding
description:
  Agmatinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the arginase family.


ensembl_gene_id: NIES2130_39340
symbol: OKH42858.1
gene_biotype: protein_coding
description:
  EEP domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_39345
symbol: OKH42859.1
gene_biotype: protein_coding
description:
  Cardiolipin synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the phospholipase D family. Cardiolipin synthase subfamily.


ensembl_gene_id: NIES2130_39350
symbol: OKH42860.1
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlgM; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_39355
symbol: OKH42861.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MtfA family.


ensembl_gene_id: NIES2130_39360
symbol: nudC
gene_biotype: protein_coding
description:
  NADH pyrophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Nudix hydrolase family. NudC subfamily.


ensembl_gene_id: NIES2130_39375
symbol: truB
gene_biotype: protein_coding
description:
  tRNA pseudouridine(55) synthase TruB; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.


ensembl_gene_id: NIES2130_39390
symbol: OKH42853.1
gene_biotype: protein_coding
description:
  Ester cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_39420
symbol: OKH42824.1
gene_biotype: protein_coding
description:
  Cytochrome-c3 hydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_39480
symbol: tmk
gene_biotype: protein_coding
description:
  dTMP kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.


ensembl_gene_id: NIES2130_39485
symbol: OKH42774.1
gene_biotype: protein_coding
description:
  DNA polymerase III subunit delta; Catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_39525
symbol: NIES2130_39525
gene_biotype: protein_coding
description:
  Glycosyltransferase; Internal stop; incomplete; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_39595
symbol: OKH42752.1
gene_biotype: protein_coding
description:
  Decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_39610
symbol: OKH42745.1
gene_biotype: protein_coding
description:
  TlyA family rRNA (cytidine-2'-O)-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_39620
symbol: OKH42747.1
gene_biotype: protein_coding
description:
  NADP-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_39650
symbol: NIES2130_39650
gene_biotype: protein_coding
description:
  Sodium:proton antiporter; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_39680
symbol: OKH42450.1
gene_biotype: protein_coding
description:
  ZIP family zinc transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_39700
symbol: NIES2130_39700
gene_biotype: protein_coding
description:
  Glycogen phosphorylase; Incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_39715
symbol: OKH42416.1
gene_biotype: protein_coding
description:
  Aldehyde dehydrogenase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: NIES2130_39760
symbol: OKH42139.1
gene_biotype: protein_coding
description:
  Heme ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_39765
symbol: OKH42140.1
gene_biotype: protein_coding
description:
  Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: NIES2130_39775
symbol: efp
gene_biotype: protein_coding
description:
  Elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.


ensembl_gene_id: NIES2130_39780
symbol: OKH42137.1
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase, biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: NIES2130_39795
symbol: NIES2130_39795
gene_biotype: protein_coding
description:
  Transposase; Frameshifted; incomplete; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_39800
symbol: OKH42107.1
gene_biotype: protein_coding
description:
  Alpha-hydroxy-acid oxidizing enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NIES2130_39810
symbol: cyp_1
gene_biotype: protein_coding
description:
  AraC family transcriptional regulator; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cytochrome P450 family.


ensembl_gene_id: NIES2130_39835
symbol: OKH41876.1
gene_biotype: protein_coding
description:
  Ureidoglycolate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


