# geneInfo

ensembl_gene_id: PMI07_000002
symbol: EUB97442.1
gene_biotype: protein_coding
description:
  KEGG: MFS permease; TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1.


ensembl_gene_id: PMI07_000007
symbol: EUB97447.1
gene_biotype: protein_coding
description:
  Fe(3+)-transporting ATPase; PFAM: ABC transporter related protein, Transport-associated OB domain-containing protein; KEGG: ABC transporter; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.


ensembl_gene_id: PMI07_000009
symbol: EUB97449.1
gene_biotype: protein_coding
description:
  PFAM: ABC-type transporter, integral membrane subunit; KEGG: binding-protein-dependent transport system inner membrane protein.


ensembl_gene_id: PMI07_000010
symbol: EUB97450.1
gene_biotype: protein_coding
description:
  KEGG: typA, GTP-binding tyrosin phosphorylated protein; TIGRFAM: GTP-binding protein TypA, small GTP-binding protein; PFAM: protein synthesis factor GTP-binding protein, elongation factor G domain-containing protein, elongation factor Tu domain 2 protein.


ensembl_gene_id: PMI07_000012
symbol: ppa
gene_biotype: protein_coding
description:
  Inorganic pyrophosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.


ensembl_gene_id: PMI07_000013
symbol: EUB97453.1
gene_biotype: protein_coding
description:
  UPF0235 protein yggU; KEGG: hypothetical protein; HAMAP : UPF0235 protein yggU; PFAM: protein of unknown function DUF167; Belongs to the UPF0235 family.


ensembl_gene_id: PMI07_000020
symbol: EUB97460.1
gene_biotype: protein_coding
description:
  Uroporphyrinogen III synthase HEM4; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.


ensembl_gene_id: PMI07_000021
symbol: hemC
gene_biotype: protein_coding
description:
  Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.


ensembl_gene_id: PMI07_000022
symbol: tsaD
gene_biotype: protein_coding
description:
  O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.


ensembl_gene_id: PMI07_000023
symbol: gpsA
gene_biotype: protein_coding
description:
  KEGG: glycerol-3-phosphate dehydrogenase, NAD(P)+, NAD(P)H-dependent; HAMAP : Glycerol-3-phosphate dehydrogenase [NAD(P)+]; PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: PMI07_000028
symbol: EUB97468.1
gene_biotype: protein_coding
description:
  KEGG: AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC domain-containing protein; SMART: Helix-turn-helix, AraC domain-containing protein.


ensembl_gene_id: PMI07_000030
symbol: EUB97470.1
gene_biotype: protein_coding
description:
  KEGG: sdhC, succinate dehydrogenase cytochrome b556 subunit; TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit; PFAM: succinate dehydrogenase cytochrome b subunit.


ensembl_gene_id: PMI07_000031
symbol: EUB97471.1
gene_biotype: protein_coding
description:
  KEGG: sdhD, succinate dehydrogenase hydrophobic membrane anchor protein; TIGRFAM: succinate dehydrogenase, hydrophobic membrane anchor protein; PFAM: succinate dehydrogenase cytochrome b subunit.


ensembl_gene_id: PMI07_000032
symbol: EUB97472.1
gene_biotype: protein_coding
description:
  TIGRFAM: succinate dehydrogenase, flavoprotein subunit, succinate dehydrogenase or fumarate reductase, flavoprotein subunit; KEGG: sdhA, succinate dehydrogenase flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein, Fumarate reductase/succinate dehydrogenase flavoprotein-like protein; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.


ensembl_gene_id: PMI07_000033
symbol: EUB97473.1
gene_biotype: protein_coding
description:
  TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; KEGG: sdhB, succinate dehydrogenase iron-sulfur subunit; PFAM: Succinate dehydogenase/fumarate reductase N-terminal; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.


ensembl_gene_id: PMI07_000036
symbol: mdh
gene_biotype: protein_coding
description:
  Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.


ensembl_gene_id: PMI07_000037
symbol: sucC
gene_biotype: protein_coding
description:
  Succinyl-CoA ligase (ADP-forming) subunit beta; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.


ensembl_gene_id: PMI07_000038
symbol: sucD
gene_biotype: protein_coding
description:
  succinyl-CoA synthetase, alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.


ensembl_gene_id: PMI07_000039
symbol: EUB97479.1
gene_biotype: protein_coding
description:
  SMART: Transketolase central region; TIGRFAM: 2-oxoglutarate dehydrogenase, E1 subunit; KEGG: sucA, 2-oxoglutarate dehydrogenase E1 component; PFAM: Transketolase central region, dehydrogenase E1 component.


ensembl_gene_id: PMI07_000041
symbol: EUB97481.1
gene_biotype: protein_coding
description:
  2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2).


ensembl_gene_id: PMI07_000042
symbol: EUB97482.1
gene_biotype: protein_coding
description:
  PFAM: membrane-associated protein in eicosanoid and glutathione metabolism (MAPEG); KEGG: hypothetical protein.


ensembl_gene_id: PMI07_000044
symbol: EUB97484.1
gene_biotype: protein_coding
description:
  PFAM: short-chain dehydrogenase/reductase SDR; KEGG: short-chain dehydrogenase/reductase SDR; SMART: Polyketide synthase/Fatty acid synthase, KR.


ensembl_gene_id: PMI07_000045
symbol: EUB97485.1
gene_biotype: protein_coding
description:
  TIGRFAM: dihydrolipoamide dehydrogenase; KEGG: lpdA, dihydrolipoamide dehydrogenase; PFAM: pyridine nucleotide-disulfide oxidoreductase dimerization region, Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain, FAD-dependent pyridine nucleotide-disulfide oxidoreductase.


ensembl_gene_id: PMI07_000049
symbol: xerC
gene_biotype: protein_coding
description:
  Tyrosine recombinase xerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.


ensembl_gene_id: PMI07_000050
symbol: EUB97490.1
gene_biotype: protein_coding
description:
  KEGG: acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase.


ensembl_gene_id: PMI07_000053
symbol: priA
gene_biotype: protein_coding
description:
  Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.


ensembl_gene_id: PMI07_000055
symbol: atpH
gene_biotype: protein_coding
description:
  ATP synthase subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: PMI07_000056
symbol: atpA
gene_biotype: protein_coding
description:
  ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.


ensembl_gene_id: PMI07_000057
symbol: atpG
gene_biotype: protein_coding
description:
  ATP synthase gamma chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.


ensembl_gene_id: PMI07_000058
symbol: atpD
gene_biotype: protein_coding
description:
  ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.


ensembl_gene_id: PMI07_000059
symbol: atpC
gene_biotype: protein_coding
description:
  ATP synthase epsilon chain; Produces ATP from ADP in the presence of a proton gradient across the membrane.


ensembl_gene_id: PMI07_000060
symbol: EUB97500.1
gene_biotype: protein_coding
description:
  Transcriptional regulator, LysR family; PFAM: LysR substrate-binding protein, regulatory protein LysR; KEGG: LysR family transcriptional regulator.


ensembl_gene_id: PMI07_000061
symbol: EUB97501.1
gene_biotype: protein_coding
description:
  PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: fdsG, formate dehydrogenase subunit gamma.


ensembl_gene_id: PMI07_000062
symbol: EUB97502.1
gene_biotype: protein_coding
description:
  PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit, NADH ubiquinone oxidoreductase, F subunit, iron sulfur binding protein, Soluble ligand binding domain-containing protein; KEGG: NAD-dependent formate dehydrogenase beta subunit; SMART: NADH ubiquinone oxidoreductase, F subunit, iron sulfur binding protein.


ensembl_gene_id: PMI07_000063
symbol: EUB97503.1
gene_biotype: protein_coding
description:
  TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: molybdopterin oxidoreductase, molybdopterin oxidoreductase Fe4S4 region, NADH:ubiquinone oxidoreductase, subunit G, iron-sulfur binding protein, molybdopterin dinucleotide-binding region, 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; KEGG: fdhA, formate dehydrogenase subunit alpha; SMART: NADH:ubiquinone oxidoreductase, subunit G, iron-sulfur binding protein, molybdopterin oxidoreductase Fe4S4 region.


ensembl_gene_id: PMI07_000064
symbol: fdhD
gene_biotype: protein_coding
description:
  Protein fdhD; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.


ensembl_gene_id: PMI07_000065
symbol: EUB97505.1
gene_biotype: protein_coding
description:
  PFAM: Formate dehydrogenase, delta subunit; KEGG: fdsD, NAD-dependent formate dehydrogenase subunit delta.


ensembl_gene_id: PMI07_000067
symbol: EUB97507.1
gene_biotype: protein_coding
description:
  Aryl-alcohol dehydrogenase (NADP(+)); KEGG: aldo/keto reductase; PFAM: NADP-dependent oxidoreductase domain.


ensembl_gene_id: PMI07_000069
symbol: EUB97509.1
gene_biotype: protein_coding
description:
  TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; KEGG: mcpA, methyl-accepting chemotaxis protein; SMART: chemotaxis sensory transducer, PAS domain containing protein, PAC repeat-containing protein.


ensembl_gene_id: PMI07_000072
symbol: EUB97512.1
gene_biotype: protein_coding
description:
  PFAM: surface antigen (D15), surface antigen variable number repeat-containing protein; KEGG: hypothetical protein.


ensembl_gene_id: PMI07_000074
symbol: EUB97514.1
gene_biotype: protein_coding
description:
  Carbon-monoxide dehydrogenase (acceptor); KEGG: xdhA, xanthine dehydrogenase; PFAM: [2Fe-2S]-binding domain-containing protein.


ensembl_gene_id: PMI07_000075
symbol: EUB97515.1
gene_biotype: protein_coding
description:
  Carbon-monoxide dehydrogenase (acceptor); PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein, aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: carbon monoxide dehydrogenase large chain; SMART: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead.


ensembl_gene_id: PMI07_000076
symbol: EUB97516.1
gene_biotype: protein_coding
description:
  Carbon-monoxide dehydrogenase (acceptor); PFAM: molybdopterin dehydrogenase FAD-binding protein, CO dehydrogenase flavoprotein domain protein; KEGG: xdhA, xanthine dehydrogenase; SMART: CO dehydrogenase flavoprotein domain protein.


ensembl_gene_id: PMI07_000077
symbol: EUB97517.1
gene_biotype: protein_coding
description:
  TIGRFAM: 5-aminolevulinic acid synthase; KEGG: hemAch, 5-aminolevulinate synthase; PFAM: aminotransferase class I and II.


ensembl_gene_id: PMI07_000078
symbol: dxr
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family.


ensembl_gene_id: PMI07_000086
symbol: EUB97526.1
gene_biotype: protein_coding
description:
  KEGG: ATP-dependent hydrolase protein; PFAM: AAA ATPase central domain protein, peptidase M41; SMART: AAA ATPase; Belongs to the AAA ATPase family.


ensembl_gene_id: PMI07_000090
symbol: EUB97530.1
gene_biotype: protein_coding
description:
  PFAM: Uncharacterized chromosomal cassette SCCmec type IVc protein CR006; KEGG: hypothetical protein.


ensembl_gene_id: PMI07_000094
symbol: EUB97534.1
gene_biotype: protein_coding
description:
  Adenosinetriphosphatase; PFAM: AAA ATPase central domain protein; KEGG: ATPase AAA; SMART: AAA ATPase.


ensembl_gene_id: PMI07_000098
symbol: EUB97538.1
gene_biotype: protein_coding
description:
  TIGRFAM: amidohydrolase; KEGG: hippurate hydrolase; PFAM: peptidase M20, peptidase dimerization domain protein.


ensembl_gene_id: PMI07_000099
symbol: EUB97539.1
gene_biotype: protein_coding
description:
  Serine-type D-Ala-D-Ala carboxypeptidase; KEGG: dacF, penicillin-binding protein dacf precursor; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Belongs to the peptidase S11 family.


ensembl_gene_id: PMI07_000100
symbol: EUB97540.1
gene_biotype: protein_coding
description:
  KEGG: cobalamin synthesis protein; PFAM: cobalamin synthesis protein P47K, cobalamin synthesis CobW domain protein; SMART: cobalamin synthesis CobW domain protein.


ensembl_gene_id: PMI07_000101
symbol: EUB97541.1
gene_biotype: protein_coding
description:
  PFAM: SirA-like domain-containing protein; KEGG: SirA family protein; Belongs to the sulfur carrier protein TusA family.


ensembl_gene_id: PMI07_000103
symbol: accA
gene_biotype: protein_coding
description:
  Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.


ensembl_gene_id: PMI07_000106
symbol: aroK
gene_biotype: protein_coding
description:
  Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.


ensembl_gene_id: PMI07_000107
symbol: aroB
gene_biotype: protein_coding
description:
  3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).


ensembl_gene_id: PMI07_000108
symbol: EUB97548.1
gene_biotype: protein_coding
description:
  KEGG: hemolysin protein; PFAM: transporter-associated region, CBS domain containing protein; SMART: transporter-associated region, CBS domain containing protein.


ensembl_gene_id: PMI07_000111
symbol: EUB97551.1
gene_biotype: protein_coding
description:
  KEGG: dnaJ, molecular chaperone DnaJ family; PFAM: heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein.


ensembl_gene_id: PMI07_000112
symbol: EUB97552.1
gene_biotype: protein_coding
description:
  TIGRFAM: cobalt chelatase, pCobS small subunit; KEGG: cobS, cobalamin biosynthesis protein; PFAM: Cobaltochelatase subunit CobS N-terminal domain, ATPase associated with various cellular activities AAA_5.


ensembl_gene_id: PMI07_000114
symbol: EUB97554.1
gene_biotype: protein_coding
description:
  Cobalt chelatase, pCobT subunit; SMART: von Willebrand factor type A; TIGRFAM: cobalt chelatase, pCobT subunit; KEGG: cobT, cobaltochelatase CobT subunit; PFAM: Cobalamin biosynthesis protein CobT VWA domain, Cobalt chelatase CobT subunit.


ensembl_gene_id: PMI07_000116
symbol: EUB97556.1
gene_biotype: protein_coding
description:
  Protein of unknown function DUF165; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage; Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily.


ensembl_gene_id: PMI07_000117
symbol: rpmB
gene_biotype: protein_coding
description:
  TIGRFAM: ribosomal protein L28; HAMAP : 50S ribosomal protein L28; KEGG: rpmB, 50S ribosomal protein L28; PFAM: ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.


ensembl_gene_id: PMI07_000122
symbol: gloB
gene_biotype: protein_coding
description:
  Hydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid.


ensembl_gene_id: PMI07_000124
symbol: hisC
gene_biotype: protein_coding
description:
  PFAM: aminotransferase class I and II; TIGRFAM: histidinol-phosphate aminotransferase; HAMAP : Histidinol-phosphate aminotransferase; KEGG: histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.


ensembl_gene_id: PMI07_000129
symbol: EUB97569.1
gene_biotype: protein_coding
description:
  ChaC family protein; Catalyzes the cleavage of glutathione into 5-oxo-L-proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides; Belongs to the gamma-glutamylcyclotransferase family.


ensembl_gene_id: PMI07_000130
symbol: EUB97570.1
gene_biotype: protein_coding
description:
  KEGG: plsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase PlsC; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase.


ensembl_gene_id: PMI07_000133
symbol: ftsE
gene_biotype: protein_coding
description:
  Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.


ensembl_gene_id: PMI07_000135
symbol: EUB97575.1
gene_biotype: protein_coding
description:
  TIGRFAM: hypoxanthine phosphoribosyltransferase; KEGG: hpt, hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.


ensembl_gene_id: PMI07_000136
symbol: EUB97576.1
gene_biotype: protein_coding
description:
  KEGG: two component response regulator; PFAM: response regulator receiver; SMART: response regulator receiver.


ensembl_gene_id: PMI07_000137
symbol: EUB97577.1
gene_biotype: protein_coding
description:
  KEGG: hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP02302, transmembrane; PFAM: Conserved hypothetical protein CHP02302, transmembrane.


ensembl_gene_id: PMI07_000138
symbol: lysA
gene_biotype: protein_coding
description:
  Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.


ensembl_gene_id: PMI07_000140
symbol: argH
gene_biotype: protein_coding
description:
  PFAM: Lyase 1, N-terminal; TIGRFAM: argininosuccinate lyase; HAMAP : Argininosuccinate lyase; KEGG: argininosuccinate lyase.


ensembl_gene_id: PMI07_000142
symbol: EUB97582.1
gene_biotype: protein_coding
description:
  KEGG: 3-hydroxybutyryl-CoA dehydrogenase; PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein, 3-hydroxyacyl-CoA dehydrogenase domain-containing protein.


ensembl_gene_id: PMI07_000143
symbol: EUB97583.1
gene_biotype: protein_coding
description:
  KEGG: electron transfer flavoprotein subunit alpha; PFAM: Electron transfer flavoprotein alpha subunit, Electron transfer flavoprotein alpha/beta-subunit; SMART: Electron transfer flavoprotein alpha/beta-subunit.


ensembl_gene_id: PMI07_000144
symbol: EUB97584.1
gene_biotype: protein_coding
description:
  KEGG: etfb3, hypothetical protein; PFAM: Electron transfer flavoprotein alpha/beta-subunit; SMART: Electron transfer flavoprotein alpha/beta-subunit.


ensembl_gene_id: PMI07_000146
symbol: EUB97586.1
gene_biotype: protein_coding
description:
  TIGRFAM: ATP/cobalamin adenosyltransferase; KEGG: hypothetical protein; PFAM: cobalamin adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family.


ensembl_gene_id: PMI07_000148
symbol: EUB97588.1
gene_biotype: protein_coding
description:
  PFAM: short-chain dehydrogenase/reductase SDR; KEGG: short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: PMI07_000150
symbol: EUB97590.1
gene_biotype: protein_coding
description:
  PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain-containing protein; KEGG: gltX, glutamyl-Q tRNA(Asp) synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: PMI07_000151
symbol: EUB97591.1
gene_biotype: protein_coding
description:
  HhH-GPD family protein; KEGG: DNA-3-methyladenine glycosylase; PFAM: HhH-GPD family protein; SMART: HhH-GPD family protein.


ensembl_gene_id: PMI07_000158
symbol: EUB97598.1
gene_biotype: protein_coding
description:
  Acetate--CoA ligase; KEGG: AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase and ligase, Domain of unknown function DUF4009.


ensembl_gene_id: PMI07_000161
symbol: secA
gene_biotype: protein_coding
description:
  Protein translocase subunit secA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. Belongs to the SecA family.


ensembl_gene_id: PMI07_000163
symbol: argJ
gene_biotype: protein_coding
description:
  Arginine biosynthesis bifunctional protein ArgJ; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family.


ensembl_gene_id: PMI07_000165
symbol: EUB97605.1
gene_biotype: protein_coding
description:
  Mutator MutT protein; KEGG: mutT, NTP pyrophosphohydrolase; TIGRFAM: mutator MutT protein; PFAM: NUDIX hydrolase.


ensembl_gene_id: PMI07_000170
symbol: EUB97610.1
gene_biotype: protein_coding
description:
  Glutaredoxin 3; Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins.


ensembl_gene_id: PMI07_000171
symbol: EUB97611.1
gene_biotype: protein_coding
description:
  PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: putative amidohydrolase.


ensembl_gene_id: PMI07_000176
symbol: ubiG
gene_biotype: protein_coding
description:
  3-demethylubiquinone-9 3-methyltransferase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family.


ensembl_gene_id: PMI07_000179
symbol: EUB97619.1
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate-transporting ATPase; PFAM: ABC transporter related protein, TOBE domain-containing protein; KEGG: aglK2, alpha-glucoside transport ATP-binding protein AglK; SMART: AAA ATPase.


ensembl_gene_id: PMI07_000180
symbol: EUB97620.1
gene_biotype: protein_coding
description:
  PFAM: ABC-type transporter, integral membrane subunit; KEGG: araQ3, L-arabinose transport system permease AraQ.


ensembl_gene_id: PMI07_000184
symbol: kduI
gene_biotype: protein_coding
description:
  4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family.


ensembl_gene_id: PMI07_000186
symbol: EUB97626.1
gene_biotype: protein_coding
description:
  Transcriptional regulator, LacI family; KEGG: reg1, HTH-type transcriptional regulator Reg1; PFAM: regulatory protein LacI; SMART: regulatory protein LacI.


ensembl_gene_id: PMI07_000188
symbol: EUB97628.1
gene_biotype: protein_coding
description:
  KEGG: lysC, aspartate kinase; TIGRFAM: aspartate kinase, monofunctional class, aspartate kinase; PFAM: aspartate/glutamate/uridylate kinase, amino acid-binding ACT domain-containing protein; Belongs to the aspartokinase family.


ensembl_gene_id: PMI07_000189
symbol: EUB97629.1
gene_biotype: protein_coding
description:
  PTSINtr with GAF domain, PtsP; SMART: GAF domain protein; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; KEGG: ptsI, phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein, PEP-utilising protein domain protein, GAF domain protein, PEP-utilising protein mobile region; Belongs to the PEP-utilizing enzyme family.


ensembl_gene_id: PMI07_000190
symbol: prfA
gene_biotype: protein_coding
description:
  Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.


ensembl_gene_id: PMI07_000191
symbol: prmC
gene_biotype: protein_coding
description:
  Protein-(glutamine-N5) methyltransferase, release factor-specific; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.


ensembl_gene_id: PMI07_000193
symbol: EUB97633.1
gene_biotype: protein_coding
description:
  Phospho-2-dehydro-3-deoxyheptonate aldolase; Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino- heptulosonate-7-phosphate (DAHP).


ensembl_gene_id: PMI07_000194
symbol: clpB
gene_biotype: protein_coding
description:
  ATP-dependent chaperone ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.


ensembl_gene_id: PMI07_000198
symbol: EUB97638.1
gene_biotype: protein_coding
description:
  PFAM: copper resistance protein CopC, copper resistance D domain protein; KEGG: copper export protein.


ensembl_gene_id: PMI07_000199
symbol: EUB97639.1
gene_biotype: protein_coding
description:
  TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein, HemN domain protein; KEGG: hemN, coproporphyrinogen III oxidase; SMART: Elongator protein 3/MiaB/NifB; Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: PMI07_000201
symbol: EUB97641.1
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate-transporting ATPase; PFAM: ABC transporter related protein, Transport-associated OB domain-containing protein; KEGG: sugar ABC transporter; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.


ensembl_gene_id: PMI07_000203
symbol: EUB97643.1
gene_biotype: protein_coding
description:
  PFAM: ABC-type transporter, integral membrane subunit; KEGG: sugar ABC transporter transmembrane protein.


ensembl_gene_id: PMI07_000204
symbol: EUB97644.1
gene_biotype: protein_coding
description:
  PFAM: extracellular solute-binding protein family 1; KEGG: putative amino acid ABC transporter, substrate-binding protein.


ensembl_gene_id: PMI07_000205
symbol: EUB97645.1
gene_biotype: protein_coding
description:
  KEGG: GntR family transcriptional regulator; PFAM: GntR domain protein, regulatory protein GntR HTH; SMART: GntR domain protein.


ensembl_gene_id: PMI07_000206
symbol: EUB97646.1
gene_biotype: protein_coding
description:
  PFAM: dihydrodipicolinate synthetase; KEGG: dihydrodipicolinate synthase; Belongs to the DapA family.


ensembl_gene_id: PMI07_000210
symbol: EUB97650.1
gene_biotype: protein_coding
description:
  PFAM: dihydrodipicolinate synthetase; KEGG: putative dihydrodipicolinate synthase; Belongs to the DapA family.


ensembl_gene_id: PMI07_000211
symbol: EUB97651.1
gene_biotype: protein_coding
description:
  KEGG: transcriptional regulator; PFAM: GntR domain protein, regulatory protein GntR HTH; SMART: GntR domain protein, regulatory protein GntR HTH.


ensembl_gene_id: PMI07_000212
symbol: EUB97652.1
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate-transporting ATPase; PFAM: ABC transporter related protein, Transport-associated OB domain-containing protein; KEGG: malK, ABC transporter nucleotide binding/ATPase (maltose/maltodextrin); SMART: AAA ATPase.


ensembl_gene_id: PMI07_000217
symbol: EUB97657.1
gene_biotype: protein_coding
description:
  PFAM: ABC-type transporter, periplasmic subunit; KEGG: oligopeptide ABC transporter substrate-binding protein.


ensembl_gene_id: PMI07_000219
symbol: EUB97659.1
gene_biotype: protein_coding
description:
  PFAM: ABC-type transporter, integral membrane subunit, Oligopeptide transport permease C-like, N-terminal domain; KEGG: ABC transporter permease.


ensembl_gene_id: PMI07_000220
symbol: EUB97660.1
gene_biotype: protein_coding
description:
  Nickel-transporting ATPase; PFAM: ABC transporter related protein; KEGG: ABC transporter permease; SMART: AAA ATPase.


ensembl_gene_id: PMI07_000221
symbol: EUB97661.1
gene_biotype: protein_coding
description:
  Polyamine-transporting ATPase; PFAM: ABC transporter related protein; KEGG: ABC transporter ATPase; SMART: AAA ATPase.


ensembl_gene_id: PMI07_000222
symbol: EUB97662.1
gene_biotype: protein_coding
description:
  GntR domain protein; KEGG: transcriptional regulator; PFAM: GntR domain protein, regulatory protein GntR HTH; SMART: GntR domain protein, regulatory protein GntR HTH.


ensembl_gene_id: PMI07_000225
symbol: EUB97665.1
gene_biotype: protein_coding
description:
  KEGG: mandelate racemase; PFAM: Mandelate racemase/muconate lactonizing protein; SMART: Mandelate racemase/muconate lactonizing protein.


ensembl_gene_id: PMI07_000227
symbol: EUB97667.1
gene_biotype: protein_coding
description:
  GntR domain protein; KEGG: GntR family transcriptional regulator; PFAM: GntR domain protein, regulatory protein GntR HTH; SMART: GntR domain protein, regulatory protein GntR HTH.


ensembl_gene_id: PMI07_000228
symbol: EUB97668.1
gene_biotype: protein_coding
description:
  PFAM: dihydrodipicolinate synthetase; TIGRFAM: 5-dehydro-4-deoxyglucarate dehydratase; HAMAP : 5-dehydro-4-deoxyglucarate dehydratase; KEGG: putative 5-dehydro-4-deoxyglucarate dehydratase; Belongs to the DapA family.


ensembl_gene_id: PMI07_000229
symbol: EUB97669.1
gene_biotype: protein_coding
description:
  PFAM: ABC-type transporter, periplasmic subunit; KEGG: dipeptide-binding ABC transporter substrate-binding protein.


ensembl_gene_id: PMI07_000231
symbol: EUB97671.1
gene_biotype: protein_coding
description:
  PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: putative mandelate racemase; SMART: Mandelate racemase/muconate lactonizing protein.


ensembl_gene_id: PMI07_000234
symbol: EUB97674.1
gene_biotype: protein_coding
description:
  Nickel-transporting ATPase; PFAM: ABC transporter related protein, Oligopeptide/dipeptide ABC transporter domain protein; KEGG: ABC transporter-like protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.


ensembl_gene_id: PMI07_000235
symbol: EUB97675.1
gene_biotype: protein_coding
description:
  PFAM: ABC-type transporter, integral membrane subunit, Oligopeptide transport permease C-like, N-terminal domain; KEGG: dppC8, peptide ABC transporter permease.


ensembl_gene_id: PMI07_000236
symbol: EUB97676.1
gene_biotype: protein_coding
description:
  PFAM: ABC-type transporter, integral membrane subunit; KEGG: dipeptide/oligopeptide/nickel ABC transporter permease.


ensembl_gene_id: PMI07_000237
symbol: EUB97677.1
gene_biotype: protein_coding
description:
  PFAM: ABC-type transporter, periplasmic subunit; KEGG: dppAch2, ABC transporter, substrate-binding protein (Dipeptide).


ensembl_gene_id: PMI07_000239
symbol: EUB97679.1
gene_biotype: protein_coding
description:
  KEGG: aroM, LuxR family transcriptional regulator; PFAM: AroM family protein, regulatory protein LuxR; SMART: regulatory protein LuxR.


ensembl_gene_id: PMI07_000241
symbol: EUB97681.1
gene_biotype: protein_coding
description:
  PFAM: Hydantoinase/oxoprolinase, Hydantoinaseoxoprolinase domain protein; KEGG: hydantoinase beta subunit-like protein.


ensembl_gene_id: PMI07_000242
symbol: EUB97682.1
gene_biotype: protein_coding
description:
  D-lactate dehydrogenase (cytochrome); KEGG: FAD linked oxidase domain-containing protein; PFAM: FAD linked oxidase domain protein, FAD linked oxidase domain-containing protein.


ensembl_gene_id: PMI07_000243
symbol: EUB97683.1
gene_biotype: protein_coding
description:
  Regulatory protein GntR HTH; KEGG: GntR family transcriptional regulator; PFAM: regulatory protein GntR HTH, GntR domain protein; SMART: regulatory protein GntR HTH, GntR domain protein.


ensembl_gene_id: PMI07_000244
symbol: EUB97684.1
gene_biotype: protein_coding
description:
  PFAM: Carbohydrate kinase, FGGY; KEGG: rhaK, putative L-xylulose kinase involved in competition for nodulation.


ensembl_gene_id: PMI07_000246
symbol: EUB97686.1
gene_biotype: protein_coding
description:
  PFAM: ABC-type transporter, integral membrane subunit; KEGG: ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: PMI07_000247
symbol: EUB97687.1
gene_biotype: protein_coding
description:
  PFAM: ABC-type transporter, integral membrane subunit; KEGG: rhaP, rhamnose ABC transporter, permease protein RhaP; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: PMI07_000248
symbol: rbsA
gene_biotype: protein_coding
description:
  Monosaccharide-transporting ATPase; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.


ensembl_gene_id: PMI07_000249
symbol: EUB97689.1
gene_biotype: protein_coding
description:
  KEGG: rhaS, rhamnose ABC transporter, periplasmic rhamnose-binding protein RhaS; TIGRFAM: rhamnose ABC transporter, periplasmic rhamnose-binding protein; PFAM: Periplasmic binding protein domain.


ensembl_gene_id: PMI07_000250
symbol: EUB97690.1
gene_biotype: protein_coding
description:
  KEGG: rhaR, DeoR family transcriptional regulator; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR.


ensembl_gene_id: PMI07_000251
symbol: EUB97691.1
gene_biotype: protein_coding
description:
  SMART: class II aldolase/adducin family protein; TIGRFAM: rhamnulose-1-phosphate aldolase/alcohol dehydrogenase; KEGG: short chain dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR, class II aldolase/adducin family protein.


ensembl_gene_id: PMI07_000252
symbol: EUB97692.1
gene_biotype: protein_coding
description:
  KEGG: sugar isomerase; TIGRFAM: L-rhamnose catabolism isomerase; PFAM: Xylose isomerase domain-containing protein TIM barrel.


ensembl_gene_id: PMI07_000253
symbol: EUB97693.1
gene_biotype: protein_coding
description:
  Cystathionine beta-lyase; KEGG: aminotransferase class i and ii; PFAM: aminotransferase class I and II.


ensembl_gene_id: PMI07_000254
symbol: EUB97694.1
gene_biotype: protein_coding
description:
  KEGG: secretion protein HlyD; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: PMI07_000255
symbol: EUB97695.1
gene_biotype: protein_coding
description:
  PFAM: acriflavin resistance protein; KEGG: multidrug efflux transporter protein; overlaps another CDS with the same product name; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: PMI07_000259
symbol: EUB97699.1
gene_biotype: protein_coding
description:
  PFAM: Glutathione S-transferase domain-containing protein; KEGG: putative glutathione S-transferase YghU.


ensembl_gene_id: PMI07_000260
symbol: EUB97700.1
gene_biotype: protein_coding
description:
  PFAM: ABC-type transporter, periplasmic subunit; KEGG: putative peptide ABC transporter, substrate-binding protein.


ensembl_gene_id: PMI07_000261
symbol: EUB97701.1
gene_biotype: protein_coding
description:
  PFAM: ABC-type transporter, integral membrane subunit; KEGG: binding-protein-dependent transport systems inner membrane component.


ensembl_gene_id: PMI07_000262
symbol: EUB97702.1
gene_biotype: protein_coding
description:
  PFAM: ABC-type transporter, integral membrane subunit, Oligopeptide transport permease C-like, N-terminal domain; KEGG: putative peptide ABC transporter, permease protein.


ensembl_gene_id: PMI07_000265
symbol: EUB97705.1
gene_biotype: protein_coding
description:
  KEGG: IclR family transcriptional regulator; PFAM: Transcriptional regulator IclR, regulatory protein IclR; SMART: regulatory protein IclR.


ensembl_gene_id: PMI07_000267
symbol: EUB97707.1
gene_biotype: protein_coding
description:
  Nickel-transporting ATPase, Fe(3+)-transporting ATPase; PFAM: ABC transporter related protein, Oligopeptide/dipeptide ABC transporter domain protein; KEGG: putative peptide ABC transporter, ATP-binding protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.


ensembl_gene_id: PMI07_000271
symbol: EUB97711.1
gene_biotype: protein_coding
description:
  KEGG: transcriptional regulator protein, LuxR family; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR.


ensembl_gene_id: PMI07_000274
symbol: EUB97714.1
gene_biotype: protein_coding
description:
  SMART: AAA ATPase; TIGRFAM: type I secretion system ATPase; KEGG: type I secretion system ATPase; PFAM: ABC transporter related protein, ABC transporter transmembrane region.


ensembl_gene_id: PMI07_000275
symbol: EUB97715.1
gene_biotype: protein_coding
description:
  KEGG: HlyD family type I secretion membrane fusion protein; TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein.


ensembl_gene_id: PMI07_000283
symbol: EUB97723.1
gene_biotype: protein_coding
description:
  PFAM: polysaccharide export protein, Soluble ligand binding domain-containing protein; KEGG: exoF1, exopolysaccharide production protein ExoF.


ensembl_gene_id: PMI07_000289
symbol: EUB97729.1
gene_biotype: protein_coding
description:
  KEGG: Orn/DAP/Arg decarboxylase 2; PFAM: Orn/DAP/Arg decarboxylase 2, N-terminal, Orn/DAP/Arg decarboxylase 2, C-terminal.


ensembl_gene_id: PMI07_000290
symbol: EUB97730.1
gene_biotype: protein_coding
description:
  KEGG: sugar transferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase.


ensembl_gene_id: PMI07_000291
symbol: EUB97731.1
gene_biotype: protein_coding
description:
  PFAM: GMC oxidoreductase, glucose-methanol-choline oxidoreductase; KEGG: glucose-methanol-choline oxidoreductase.


ensembl_gene_id: PMI07_000293
symbol: EUB97733.1
gene_biotype: protein_coding
description:
  PFAM: 4'-phosphopantetheinyl transferase; KEGG: phosphopantetheinyl transferase PptA; Belongs to the P-Pant transferase superfamily.


ensembl_gene_id: PMI07_000294
symbol: EUB97734.1
gene_biotype: protein_coding
description:
  TIGRFAM: Natural product biosynthesis luciferase-like monooxygenase domain; PFAM: AMP-dependent synthetase and ligase, formyl transferase domain protein, luciferase family protein, acyl carrier protein familyprotein; KEGG: amino acid adenylation protein; SMART: Polyketide synthase, phosphopantetheine-binding protein.


ensembl_gene_id: PMI07_000295
symbol: EUB97735.1
gene_biotype: protein_coding
description:
  6-deoxyerythronolide-B synthase, Phenylalanine racemase (ATP-hydrolyzing); PFAM: Beta-ketoacyl synthase, acyl carrier protein familyprotein, Thioesterase, Acyl transferase, KR domain protein; KEGG: non-ribosomal peptide synthase; SMART: Polyketide synthase, beta-ketoacyl synthase region-containing protein, Polyketide synthase, phosphopantetheine-binding protein, Polyketide synthase, thioesterase domain-containing protein, Polyketide synthase, acyl transferase domain-containing protein, Polyketide synthase, dehydratase domain-containing protein, Polyketide synthase/Fatty acid synthase, KR.


ensembl_gene_id: PMI07_000298
symbol: EUB97738.1
gene_biotype: protein_coding
description:
  Transcriptional regulator, LuxR family; KEGG: two-component response regulator protein; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR.


ensembl_gene_id: PMI07_000303
symbol: EUB97743.1
gene_biotype: protein_coding
description:
  TIGRFAM: T1SS-143 repeat-containing protein, outer membrane adhesin like proteiin; KEGG: putative outer membrane adhesin like protein, multiple VCBS domains.


ensembl_gene_id: PMI07_000304
symbol: EUB97744.1
gene_biotype: protein_coding
description:
  KEGG: outer membrane protein; TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein.


ensembl_gene_id: PMI07_000306
symbol: EUB97746.1
gene_biotype: protein_coding
description:
  KEGG: type I secretion membrane fusion protein, HlyD family; TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein.


ensembl_gene_id: PMI07_000308
symbol: EUB97748.1
gene_biotype: protein_coding
description:
  PFAM: transglutaminase family protein cysteine peptidase BTLCP; KEGG: transglutaminase family protein cysteine peptidase BTLCP.


ensembl_gene_id: PMI07_000314
symbol: EUB97754.1
gene_biotype: protein_coding
description:
  Undecaprenyl-phosphate galactose phosphotransferase; KEGG: exoY, succinoglycan exopolysaccharide synthesis protein; PFAM: sugar transferase.


ensembl_gene_id: PMI07_000315
symbol: EUB97755.1
gene_biotype: protein_coding
description:
  PFAM: Exopolysaccharide production repressor; KEGG: exoX, exopolysaccharide production repressor protein ExoX.


ensembl_gene_id: PMI07_000323
symbol: EUB97763.1
gene_biotype: protein_coding
description:
  PFAM: glycosyl transferase family 2; KEGG: exoA, succinoglycan biosynthesis glycosyltransferase ExoA; overlaps another CDS with the same product name.


ensembl_gene_id: PMI07_000324
symbol: EUB97764.1
gene_biotype: protein_coding
description:
  PFAM: glycosyl transferase family 2; KEGG: exoM, UDP-hexose transferase; overlaps another CDS with the same product name.


ensembl_gene_id: PMI07_000325
symbol: EUB97765.1
gene_biotype: protein_coding
description:
  PFAM: glycosyl transferase family 2; KEGG: glycosyl transferase family protein; overlaps another CDS with the same product name.


ensembl_gene_id: PMI07_000327
symbol: EUB97767.1
gene_biotype: protein_coding
description:
  KEGG: succinoglycan biosynthesis transport protein exoP; TIGRFAM: exopolysaccharide transport protein family, capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein, AAA domain.


ensembl_gene_id: PMI07_000328
symbol: EUB97768.1
gene_biotype: protein_coding
description:
  uroporphyrin-III C-methyltransferase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme. Belongs to the precorrin methyltransferase family.  In the N-terminal section; belongs to the precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase family.


ensembl_gene_id: PMI07_000329
symbol: EUB97769.1
gene_biotype: protein_coding
description:
  PFAM: molybdopterin oxidoreductase, molybdopterin oxidoreductase Fe4S4 region, BFD domain protein [2Fe-2S]-binding domain protein, molybdopterin dinucleotide-binding region; KEGG: narB, nitrate reductase large subunit protein; SMART: molybdopterin oxidoreductase Fe4S4 region; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.


ensembl_gene_id: PMI07_000332
symbol: EUB97772.1
gene_biotype: protein_coding
description:
  TIGRFAM: nitrite reductase [NAD(P)H], large subunit; KEGG: nasD, assimilatory siroheme nitrite reductase; PFAM: nitrite and sulfite reductase 4Fe-4S region, Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain, FAD-dependent pyridine nucleotide-disulfide oxidoreductase, nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein, BFD domain protein [2Fe-2S]-binding domain protein.


ensembl_gene_id: PMI07_000333
symbol: EUB97773.1
gene_biotype: protein_coding
description:
  SMART: AAA ATPase; TIGRFAM: nitrate ABC transporter, ATPase subunits C and D; KEGG: nrtCf, nitrate ABC transporter ATP-binding protein; PFAM: ABC transporter related protein.


ensembl_gene_id: PMI07_000334
symbol: EUB97774.1
gene_biotype: protein_coding
description:
  KEGG: nitrate transporter permease component; TIGRFAM: nitrate ABC transporter, inner membrane subunit; PFAM: ABC-type transporter, integral membrane subunit.


ensembl_gene_id: PMI07_000337
symbol: EUB97777.1
gene_biotype: protein_coding
description:
  KEGG: nasT, probable two-component transcriptional regulator; PFAM: ANTAR domain protein, response regulator receiver; SMART: ANTAR domain protein, response regulator receiver.


ensembl_gene_id: PMI07_000338
symbol: EUB97778.1
gene_biotype: protein_coding
description:
  KEGG: ftsK, ftsK cell division protein; PFAM: cell division FtsK/SpoIIIE, DNA translocase ftsK gamma; SMART: DNA translocase ftsK gamma, AAA ATPase; Belongs to the FtsK/SpoIIIE/SftA family.


ensembl_gene_id: PMI07_000340
symbol: EUB97780.1
gene_biotype: protein_coding
description:
  KEGG: nitrilotriacetate monooxygenase; PFAM: flavin reductase domain protein FMN-binding protein; SMART: flavin reductase domain protein FMN-binding protein.


ensembl_gene_id: PMI07_000343
symbol: EUB97783.1
gene_biotype: protein_coding
description:
  KEGG: GntR family transcriptional regulator; PFAM: UbiC transcription regulator-associated domain-containing protein, regulatory protein GntR HTH; SMART: UbiC transcription regulator-associated domain-containing protein, regulatory protein GntR HTH.


ensembl_gene_id: PMI07_000344
symbol: EUB97784.1
gene_biotype: protein_coding
description:
  PFAM: glycoside hydrolase family 31; KEGG: alpha-glucosidase; Belongs to the glycosyl hydrolase 31 family.


ensembl_gene_id: PMI07_000352
symbol: EUB97792.1
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate-transporting ATPase; PFAM: ABC transporter related protein, Transport-associated OB domain-containing protein; KEGG: ABC transporter ATP-binding protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.


ensembl_gene_id: PMI07_000354
symbol: EUB97794.1
gene_biotype: protein_coding
description:
  Carbon-monoxide dehydrogenase (acceptor); PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein, aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: coxL2, carbon-monoxide dehydrogenase large subunit; SMART: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead.


ensembl_gene_id: PMI07_000356
symbol: EUB97796.1
gene_biotype: protein_coding
description:
  KEGG: transcriptional regulator; PFAM: Transcriptional regulator IclR, regulatory protein IclR; SMART: regulatory protein IclR.


ensembl_gene_id: PMI07_000360
symbol: EUB97800.1
gene_biotype: protein_coding
description:
  SMART: AAA ATPase; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: Oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related protein, Oligopeptide/dipeptide ABC transporter domain protein; Belongs to the ABC transporter superfamily.


ensembl_gene_id: PMI07_000361
symbol: EUB97801.1
gene_biotype: protein_coding
description:
  SMART: AAA ATPase; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: oligopeptide ABC transporter ATPase; PFAM: Oligopeptide/dipeptide ABC transporter domain protein, ABC transporter related protein; Belongs to the ABC transporter superfamily.


ensembl_gene_id: PMI07_000362
symbol: EUB97802.1
gene_biotype: protein_coding
description:
  NADPH:quinone reductase; PFAM: Alcohol dehydrogenase zinc-binding domain protein, Alcohol dehydrogenase GroES domain protein; KEGG: NADPH:quinone reductase; SMART: Polyketide synthase, enoylreductase.


ensembl_gene_id: PMI07_000363
symbol: EUB97803.1
gene_biotype: protein_coding
description:
  KEGG: N-methylhydantoinase (ATP-hydrolyzing) B 2; PFAM: Hydantoinase B/oxoprolinase; overlaps another CDS with the same product name.


ensembl_gene_id: PMI07_000364
symbol: EUB97804.1
gene_biotype: protein_coding
description:
  KEGG: 5-oxoprolinase; PFAM: Hydantoinase/oxoprolinase, Hydantoinaseoxoprolinase domain protein; overlaps another CDS with the same product name.


ensembl_gene_id: PMI07_000365
symbol: EUB97805.1
gene_biotype: protein_coding
description:
  Beta-Ala-His dipeptidase; KEGG: M20/M25/M40 family peptidase; PFAM: peptidase dimerization domain protein, peptidase M20.


ensembl_gene_id: PMI07_000366
symbol: EUB97806.1
gene_biotype: protein_coding
description:
  TIGRFAM: quinone oxidoreductase, YhdH/YhfP family; PFAM: Alcohol dehydrogenase zinc-binding domain protein, Alcohol dehydrogenase GroES domain protein; KEGG: alcohol dehydrogenase; SMART: Polyketide synthase, enoylreductase.


ensembl_gene_id: PMI07_000367
symbol: EUB97807.1
gene_biotype: protein_coding
description:
  Regulatory protein GntR HTH; KEGG: GntR family transcriptional regulator; PFAM: regulatory protein GntR HTH, GntR domain protein; SMART: GntR domain protein, regulatory protein GntR HTH.


ensembl_gene_id: PMI07_000368
symbol: EUB97808.1
gene_biotype: protein_coding
description:
  D-lactate dehydrogenase (cytochrome); KEGG: oxidoreductase; PFAM: FAD linked oxidase domain protein, FAD linked oxidase domain-containing protein.


ensembl_gene_id: PMI07_000369
symbol: EUB97809.1
gene_biotype: protein_coding
description:
  PFAM: Pyruvate/ketoisovalerate oxidoreductase, thiamine pyrophosphate TPP-binding domain-containing protein; KEGG: indolepyruvate ferredoxin oxidoreductase.


ensembl_gene_id: PMI07_000370
symbol: EUB97810.1
gene_biotype: protein_coding
description:
  Ribosylpyrimidine nucleosidase; KEGG: nucleoside hydrolase; PFAM: Inosine/uridine-preferring nucleoside hydrolase.


ensembl_gene_id: PMI07_000371
symbol: EUB97811.1
gene_biotype: protein_coding
description:
  CoA-binding domain protein; KEGG: pauA, pimeloyl-CoA synthetase; PFAM: CoA-binding domain protein; SMART: CoA-binding domain protein.


ensembl_gene_id: PMI07_000372
symbol: EUB97812.1
gene_biotype: protein_coding
description:
  PFAM: Enoyl-CoA hydratase/isomerase; KEGG: enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.


ensembl_gene_id: PMI07_000373
symbol: psuG
gene_biotype: protein_coding
description:
  Pseudouridine-5'-phosphate glycosidase; Catalyzes the reversible cleavage of pseudouridine 5'- phosphate (PsiMP) to ribose 5-phosphate and uracil. Functions biologically in the cleavage direction, as part of a pseudouridine degradation pathway; Belongs to the pseudouridine-5'-phosphate glycosidase family.


ensembl_gene_id: PMI07_000375
symbol: EUB97815.1
gene_biotype: protein_coding
description:
  PFAM: Non-hem dioxygenase N-terminal domain, 2OG-Fe(II) oxygenase; KEGG: Fe-containing oxidoreductase; Belongs to the iron/ascorbate-dependent oxidoreductase family.


ensembl_gene_id: PMI07_000377
symbol: EUB97817.1
gene_biotype: protein_coding
description:
  Polyamine-transporting ATPase; PFAM: ABC transporter related protein, Transport-associated OB domain-containing protein; KEGG: ABC transporter ATP-binding protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.


ensembl_gene_id: PMI07_000380
symbol: EUB97820.1
gene_biotype: protein_coding
description:
  PFAM: D-serine dehydratase-like domain, alanine racemase domain protein; KEGG: D-threonine aldolase.


ensembl_gene_id: PMI07_000385
symbol: EUB97825.1
gene_biotype: protein_coding
description:
  KEGG: mcpA9, chemoreceptor McpA; PFAM: chemotaxis sensory transducer, 4HB MCP domain, histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer, histidine kinase HAMP region domain protein.


ensembl_gene_id: PMI07_000388
symbol: EUB97828.1
gene_biotype: protein_coding
description:
  Carbon-monoxide dehydrogenase (acceptor); KEGG: carbon monoxide dehydrogenase small chain; PFAM: [2Fe-2S]-binding domain-containing protein, ferredoxin.


ensembl_gene_id: PMI07_000389
symbol: EUB97829.1
gene_biotype: protein_coding
description:
  PFAM: molybdopterin dehydrogenase FAD-binding protein, CO dehydrogenase flavoprotein domain protein; KEGG: oxidoreductase, molybdopterin binding subunit; SMART: CO dehydrogenase flavoprotein domain protein; overlaps another CDS with the same product name.


ensembl_gene_id: PMI07_000390
symbol: EUB97830.1
gene_biotype: protein_coding
description:
  PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein, aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein; SMART: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; overlaps another CDS with the same product name.


ensembl_gene_id: PMI07_000392
symbol: EUB97832.1
gene_biotype: protein_coding
description:
  PFAM: NADP oxidoreductase coenzyme F420-dependent; KEGG: NADP oxidoreductase, coenzyme F420-dependent protein.


ensembl_gene_id: PMI07_000399
symbol: EUB97839.1
gene_biotype: protein_coding
description:
  KEGG: methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer.


ensembl_gene_id: PMI07_000401
symbol: EUB97841.1
gene_biotype: protein_coding
description:
  KEGG: flavin-dependent oxidoreductase; TIGRFAM: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family; PFAM: luciferase family protein.


ensembl_gene_id: PMI07_000402
symbol: EUB97842.1
gene_biotype: protein_coding
description:
  Transcriptional regulator, XRE family; KEGG: helix-hairpin-helix DNA-binding motif-containing protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein.


ensembl_gene_id: PMI07_000405
symbol: EUB97845.1
gene_biotype: protein_coding
description:
  KEGG: cytochrome bd ubiquinol oxidase subunit II; TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II.


ensembl_gene_id: PMI07_000406
symbol: EUB97846.1
gene_biotype: protein_coding
description:
  PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: Cytochrome bd-type quinol oxidase, subunit 1.


ensembl_gene_id: PMI07_000410
symbol: EUB97850.1
gene_biotype: protein_coding
description:
  KEGG: phospholipase D/transphosphatidylase; PFAM: Phospholipase D-like domain, phospholipase D/Transphosphatidylase; SMART: phospholipase D/Transphosphatidylase.


ensembl_gene_id: PMI07_000420
symbol: EUB97860.1
gene_biotype: protein_coding
description:
  KEGG: WecB/TagA/CpsF family glycosyl transferase; TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF; Belongs to the glycosyltransferase 26 family.


ensembl_gene_id: PMI07_000422
symbol: EUB97862.1
gene_biotype: protein_coding
description:
  PFAM: glycoside hydrolase family 5; KEGG: glycoside hydrolase family protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.


ensembl_gene_id: PMI07_000424
symbol: EUB97864.1
gene_biotype: protein_coding
description:
  TIGRFAM: asparagine synthase (glutamine-hydrolyzing); KEGG: asparagine synthase; PFAM: asparagine synthase, glutamine amidotransferase class-II.


ensembl_gene_id: PMI07_000425
symbol: EUB97865.1
gene_biotype: protein_coding
description:
  Dihydrolipoyl dehydrogenase; KEGG: mercuric reductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain, pyridine nucleotide-disulfide oxidoreductase dimerization region, FAD-dependent pyridine nucleotide-disulfide oxidoreductase.


ensembl_gene_id: PMI07_000427
symbol: EUB97867.1
gene_biotype: protein_coding
description:
  Histidine kinase; Member of the two-component regulatory system DctB/DctD involved in the transport of C4-dicarboxylates. DctB functions as a membrane-associated protein kinase that phosphorylates DctD in response to environmental signals.


ensembl_gene_id: PMI07_000428
symbol: EUB97868.1
gene_biotype: protein_coding
description:
  Putative two component, sigma54 specific, transcriptional regulator; KEGG: two-component response regulator protein; PFAM: sigma-54 factor interaction domain-containing protein, response regulator receiver; SMART: response regulator receiver, AAA ATPase.


ensembl_gene_id: PMI07_000432
symbol: EUB97872.1
gene_biotype: protein_coding
description:
  KEGG: LacI family transcriptional regulator; PFAM: regulatory protein LacI; SMART: regulatory protein LacI.


ensembl_gene_id: PMI07_000433
symbol: EUB97873.1
gene_biotype: protein_coding
description:
  PFAM: extracellular solute-binding protein family 1; KEGG: sugar ABC transporter substrate-binding protein.


ensembl_gene_id: PMI07_000436
symbol: EUB97876.1
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate-transporting ATPase; PFAM: ABC transporter related protein, Transport-associated OB domain-containing protein; KEGG: putative sugar ABC transporter ATP-binding protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.


ensembl_gene_id: PMI07_000437
symbol: EUB97877.1
gene_biotype: protein_coding
description:
  Malto-oligosyltrehalose trehalohydrolase; SMART: alpha amylase catalytic sub domain-containing protein; TIGRFAM: malto-oligosyltrehalose trehalohydrolase; KEGG: treZ, malto-oligosyltrehalose trehalohydrolase; PFAM: alpha amylase catalytic region, Domain of unknown function DUF3459.


ensembl_gene_id: PMI07_000438
symbol: EUB97878.1
gene_biotype: protein_coding
description:
  KEGG: hypothetical protein; PFAM: transport-associated protein; SMART: Transport-associated and nodulation region.


ensembl_gene_id: PMI07_000440
symbol: EUB97880.1
gene_biotype: protein_coding
description:
  KEGG: signal transduction histidine kinase; PFAM: HWE histidine kinase, histidine kinase HAMP region domain protein; SMART: HWE histidine kinase.


ensembl_gene_id: PMI07_000442
symbol: EUB97882.1
gene_biotype: protein_coding
description:
  KEGG: pfpI, proteinase; TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain-containing protein.


ensembl_gene_id: PMI07_000444
symbol: EUB97884.1
gene_biotype: protein_coding
description:
  KEGG: cytochrome C oxidase subunit II; TIGRFAM: cytochrome c oxidase, subunit II; PFAM: cytochrome c oxidase subunit II, cytochrome c class I.


ensembl_gene_id: PMI07_000445
symbol: EUB97885.1
gene_biotype: protein_coding
description:
  KEGG: cytochrome c oxidase; TIGRFAM: cytochrome c oxidase, subunit I; PFAM: cytochrome c oxidase subunit I; Belongs to the heme-copper respiratory oxidase family.


ensembl_gene_id: PMI07_000447
symbol: EUB97887.1
gene_biotype: protein_coding
description:
  PFAM: Cytochrome c oxidase caa3-type, assembly factor CtaG-related protein; KEGG: Cytochrome c oxidase caa3-type, assembly factor CtaG-related protein.


ensembl_gene_id: PMI07_000452
symbol: EUB97892.1
gene_biotype: protein_coding
description:
  Glycogen debranching enzyme GlgX; SMART: alpha amylase catalytic sub domain-containing protein; TIGRFAM: glycogen debranching enzyme GlgX; KEGG: hypothetical protein; PFAM: glycoside hydrolase family 13 domain protein, alpha amylase catalytic region; Belongs to the glycosyl hydrolase 13 family.


ensembl_gene_id: PMI07_000453
symbol: EUB97893.1
gene_biotype: protein_coding
description:
  Transcriptional regulator, LuxR family; KEGG: regulatory protein LuxR; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR.


ensembl_gene_id: PMI07_000462
symbol: ku
gene_biotype: protein_coding
description:
  DNA repair protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.


ensembl_gene_id: PMI07_000463
symbol: EUB97903.1
gene_biotype: protein_coding
description:
  KEGG: ATP-dependent DNA ligase; TIGRFAM: DNA ligase D, DNA polymerase LigD, ligase domain protein, DNA ligase D, 3'-phosphoesterase domain protein, DNA polymerase LigD, polymerase domain protein; PFAM: DNA ligase D 3-phosphoesterase domain-containing protein, ATP dependent DNA ligase domain protein, DNA primase small subunit, ATP dependent DNA ligase.


ensembl_gene_id: PMI07_000465
symbol: EUB97905.1
gene_biotype: protein_coding
description:
  RNA polymerase, sigma-24 subunit, ECF subfamily; KEGG: RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2, sigma-70 region 2 domain protein; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: PMI07_000467
symbol: EUB97907.1
gene_biotype: protein_coding
description:
  SMART: Pyrrolo-quinoline quinone beta-propeller repeat-containing protein; TIGRFAM: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family; KEGG: Glucose dehydrogenase; PFAM: Pyrrolo-quinoline quinone repeat-containing protein.


ensembl_gene_id: PMI07_000469
symbol: EUB97909.1
gene_biotype: protein_coding
description:
  PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein, response regulator receiver, histidine kinase A domain protein; KEGG: PAS/PAC sensor hybrid histidine kinase; SMART: ATP-binding region ATPase domain protein, PAS domain containing protein, histidine kinase A domain protein, PAC repeat-containing protein, response regulator receiver.


ensembl_gene_id: PMI07_000471
symbol: EUB97911.1
gene_biotype: protein_coding
description:
  TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: PMI07_000472
symbol: EUB97912.1
gene_biotype: protein_coding
description:
  PFAM: acriflavin resistance protein; KEGG: AcrB/AcrD/AcrF family protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: PMI07_000473
symbol: EUB97913.1
gene_biotype: protein_coding
description:
  Transcriptional regulator, LysR family; PFAM: LysR substrate-binding protein, regulatory protein LysR; KEGG: transcriptional regulator.


ensembl_gene_id: PMI07_000475
symbol: EUB97915.1
gene_biotype: protein_coding
description:
  Monosaccharide-transporting ATPase; PFAM: ABC transporter related protein; KEGG: branched chain amino acid ABC transporter ATPase; SMART: AAA ATPase.


ensembl_gene_id: PMI07_000476
symbol: EUB97916.1
gene_biotype: protein_coding
description:
  KEGG: putative ATP-binding component of ABC transporter; PFAM: ABC transporter related protein; SMART: AAA ATPase.


ensembl_gene_id: PMI07_000477
symbol: EUB97917.1
gene_biotype: protein_coding
description:
  PFAM: ABC-type transporter, integral membrane subunit; KEGG: branched chain amino acid ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: PMI07_000481
symbol: EUB97921.1
gene_biotype: protein_coding
description:
  TIGRFAM: 3-hydroxyisobutyrate dehydrogenase; KEGG: putative 3-hydroxyisobutyrate dehydrogenase; PFAM: 6-phosphogluconate dehydrogenase NAD-binding protein; Belongs to the HIBADH-related family.


ensembl_gene_id: PMI07_000483
symbol: EUB97923.1
gene_biotype: protein_coding
description:
  TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; KEGG: sulfate ABC transporter sulfate-binding protein.


ensembl_gene_id: PMI07_000484
symbol: EUB97924.1
gene_biotype: protein_coding
description:
  Sulfate ABC transporter, inner membrane subunit CysT; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: PMI07_000485
symbol: EUB97925.1
gene_biotype: protein_coding
description:
  KEGG: ABC transporter permease; TIGRFAM: sulfate ABC transporter, inner membrane subunit CysW, sulfate ABC transporter, inner membrane subunit; PFAM: ABC-type transporter, integral membrane subunit.


ensembl_gene_id: PMI07_000486
symbol: EUB97926.1
gene_biotype: protein_coding
description:
  SMART: AAA ATPase; TIGRFAM: sulfate ABC transporter, ATPase subunit; KEGG: sulfate ABC transporter ATP-binding protein; PFAM: ABC transporter related protein; Belongs to the ABC transporter superfamily. Sulfate/tungstate importer (TC 3.A.1.6) family.


ensembl_gene_id: PMI07_000489
symbol: EUB97929.1
gene_biotype: protein_coding
description:
  Transcriptional regulator, XRE family; KEGG: transcriptional regulator; PFAM: Cupin 2 conserved barrel domain protein, helix-turn-helix domain protein; SMART: helix-turn-helix domain protein.


ensembl_gene_id: PMI07_000498
symbol: EUB97938.1
gene_biotype: protein_coding
description:
  PFAM: ABC-type transporter, integral membrane subunit; KEGG: spermidine/putrescine ABC transporter permease.


ensembl_gene_id: PMI07_000500
symbol: EUB97940.1
gene_biotype: protein_coding
description:
  Polyamine-transporting ATPase; PFAM: ABC transporter related protein; KEGG: spermidine/putrescine ABC transporter ATPase; SMART: AAA ATPase.


ensembl_gene_id: PMI07_000501
symbol: EUB97941.1
gene_biotype: protein_coding
description:
  PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: inosine-uridine preferring nucleoside hydrolase.


ensembl_gene_id: PMI07_000502
symbol: ade
gene_biotype: protein_coding
description:
  HAMAP : Adenine deaminase; KEGG: adeC, adenine deaminase; PFAM: Adenine deaminase C-terminal domain, amidohydrolase; Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family.


ensembl_gene_id: PMI07_000505
symbol: EUB97945.1
gene_biotype: protein_coding
description:
  PFAM: ABC-type transporter, periplasmic subunit; KEGG: oligopeptide ABC transporter substrate binding protein.


ensembl_gene_id: PMI07_000506
symbol: EUB97946.1
gene_biotype: protein_coding
description:
  PFAM: ABC-type transporter, integral membrane subunit; KEGG: oligopeptide ABC transporter, membrane spanning protein.


ensembl_gene_id: PMI07_000507
symbol: EUB97947.1
gene_biotype: protein_coding
description:
  PFAM: ABC-type transporter, integral membrane subunit, Oligopeptide transport permease C-like, N-terminal domain; KEGG: oligopeptide ABC transporter permease.


ensembl_gene_id: PMI07_000508
symbol: EUB97948.1
gene_biotype: protein_coding
description:
  Nickel-transporting ATPase; PFAM: ABC transporter related protein, Oligopeptide/dipeptide ABC transporter domain protein; KEGG: oligopeptide ABC transporter ATPase; SMART: AAA ATPase.


ensembl_gene_id: PMI07_000509
symbol: EUB97949.1
gene_biotype: protein_coding
description:
  Polyamine-transporting ATPase; PFAM: ABC transporter related protein; KEGG: oligopeptide ABC transporter nucleotide-binding protein/ATPase; SMART: AAA ATPase.


ensembl_gene_id: PMI07_000519
symbol: EUB97959.1
gene_biotype: protein_coding
description:
  RNA polymerase, sigma-24 subunit, ECF subfamily; KEGG: RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein, Sigma-70 region 4 type 2; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: PMI07_000521
symbol: EUB97961.1
gene_biotype: protein_coding
description:
  RNA polymerase, sigma-24 subunit, ECF subfamily; KEGG: two-component response regulator; PFAM: response regulator receiver, Sigma-70 region 4 type 2; SMART: response regulator receiver.


ensembl_gene_id: PMI07_000522
symbol: EUB97962.1
gene_biotype: protein_coding
description:
  UPF0391 membrane protein ytjA; KEGG: Protein of unknown function (DUF1328); HAMAP : UPF0391 membrane protein ytjA; PFAM: protein of unknown function DUF1328.


ensembl_gene_id: PMI07_000525
symbol: EUB97965.1
gene_biotype: protein_coding
description:
  PFAM: ABC-type transporter, integral membrane subunit, Oligopeptide transport permease C-like, N-terminal domain; KEGG: oligopeptide transport system permease.


ensembl_gene_id: PMI07_000526
symbol: EUB97966.1
gene_biotype: protein_coding
description:
  PFAM: ABC-type transporter, integral membrane subunit; KEGG: oligopeptide transport system permease.


ensembl_gene_id: PMI07_000527
symbol: EUB97967.1
gene_biotype: protein_coding
description:
  PFAM: ABC-type transporter, periplasmic subunit; KEGG: oligopeptide transport system substrate binding protein.


ensembl_gene_id: PMI07_000529
symbol: EUB97969.1
gene_biotype: protein_coding
description:
  Nickel-transporting ATPase, Fe(3+)-transporting ATPase; PFAM: ABC transporter related protein, Oligopeptide/dipeptide ABC transporter domain protein; KEGG: ABC transporter nucleotide binding/ATPase; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.


ensembl_gene_id: PMI07_000532
symbol: EUB97972.1
gene_biotype: protein_coding
description:
  Transcriptional regulator, DeoR family; PFAM: sugar-binding domain-containing protein; KEGG: operon regulator SmoC.


ensembl_gene_id: PMI07_000533
symbol: EUB97973.1
gene_biotype: protein_coding
description:
  PFAM: extracellular solute-binding protein family 1; KEGG: sorbitol ABC transporter substrate binding protein.


ensembl_gene_id: PMI07_000534
symbol: EUB97974.1
gene_biotype: protein_coding
description:
  PFAM: ABC-type transporter, integral membrane subunit; KEGG: sorbitol/mannitol ABC transporter permease.


ensembl_gene_id: PMI07_000535
symbol: EUB97975.1
gene_biotype: protein_coding
description:
  PFAM: ABC-type transporter, integral membrane subunit; KEGG: sorbitol/mannitol ABC transporter, membrane spanning protein.


ensembl_gene_id: PMI07_000536
symbol: EUB97976.1
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate-transporting ATPase; PFAM: ABC transporter related protein, TOBE domain-containing protein; KEGG: sorbitol/mannitol ABC transporter ATPase; SMART: AAA ATPase.


ensembl_gene_id: PMI07_000537
symbol: EUB97977.1
gene_biotype: protein_coding
description:
  KEGG: mtlK, mannitol 2-dehydrogenase; PFAM: Mannitol dehydrogenase domain-containing protein, Mannitol dehydrogenase rossman domain-containing protein.


ensembl_gene_id: PMI07_000540
symbol: EUB97980.1
gene_biotype: protein_coding
description:
  Peptidoglycan glycosyltransferase; KEGG: pbpB, penicillin-binding protein; PFAM: penicillin-binding protein transpeptidase, Penicillin-binding protein dimerization domain-containing protein.


ensembl_gene_id: PMI07_000542
symbol: nth
gene_biotype: protein_coding
description:
  Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.


ensembl_gene_id: PMI07_000544
symbol: EUB97984.1
gene_biotype: protein_coding
description:
  TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding protein, Helix-turn-helix, AraC domain-containing protein; KEGG: 6-O-methylguanine DNA methyltransferase; SMART: Helix-turn-helix, AraC domain-containing protein.


ensembl_gene_id: PMI07_000545
symbol: EUB97985.1
gene_biotype: protein_coding
description:
  Transcriptional regulator, DeoR family; PFAM: sugar-binding domain-containing protein; KEGG: transcriptional regulator.


ensembl_gene_id: PMI07_000546
symbol: tal
gene_biotype: protein_coding
description:
  Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.


ensembl_gene_id: PMI07_000547
symbol: EUB97987.1
gene_biotype: protein_coding
description:
  TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; KEGG: sensory methylation accepting chemotaxis protein; SMART: chemotaxis sensory transducer, PAC repeat-containing protein, PAS domain containing protein.


ensembl_gene_id: PMI07_000550
symbol: EUB97990.1
gene_biotype: protein_coding
description:
  KEGG: MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR.


ensembl_gene_id: PMI07_000553
symbol: lysS
gene_biotype: protein_coding
description:
  PFAM: tRNA synthetase class II (D K and N), nucleic acid binding OB-fold tRNA/helicase-type; TIGRFAM: lysyl-tRNA synthetase; HAMAP : Lysyl-tRNA synthetase; KEGG: lysS, lysyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family.


ensembl_gene_id: PMI07_000554
symbol: gltX
gene_biotype: protein_coding
description:
  glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.


ensembl_gene_id: PMI07_000556
symbol: EUB97996.1
gene_biotype: protein_coding
description:
  PFAM: glutathione peroxidase; KEGG: glutathione peroxidase; Belongs to the glutathione peroxidase family.


ensembl_gene_id: PMI07_000562
symbol: EUB98002.1
gene_biotype: protein_coding
description:
  KEGG: multidrug resistance protein B; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1.


ensembl_gene_id: PMI07_000563
symbol: EUB98003.1
gene_biotype: protein_coding
description:
  KEGG: LacI family transcriptional regulator; PFAM: Periplasmic binding protein domain, regulatory protein LacI; SMART: regulatory protein LacI.


ensembl_gene_id: PMI07_000565
symbol: xylA
gene_biotype: protein_coding
description:
  PFAM: Xylose isomerase domain-containing protein TIM barrel; TIGRFAM: xylose isomerase; HAMAP : Xylose isomerase; KEGG: xylA, xylose isomerase; Belongs to the xylose isomerase family.


ensembl_gene_id: PMI07_000566
symbol: EUB98006.1
gene_biotype: protein_coding
description:
  Monosaccharide-transporting ATPase; PFAM: ABC transporter related protein; KEGG: ABC transporter; SMART: AAA ATPase.


ensembl_gene_id: PMI07_000567
symbol: EUB98007.1
gene_biotype: protein_coding
description:
  PFAM: ABC-type transporter, integral membrane subunit; KEGG: monosaccharide-transporting ATPase; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: PMI07_000569
symbol: EUB98009.1
gene_biotype: protein_coding
description:
  PFAM: Xylose isomerase domain-containing protein TIM barrel, AP endonuclease 2 domain protein; KEGG: hypothetical protein.


ensembl_gene_id: PMI07_000572
symbol: EUB98012.1
gene_biotype: protein_coding
description:
  Chloramphenicol O-acetyltransferase; KEGG: transacetylase; PFAM: transferase hexapeptide repeat containing protein.


ensembl_gene_id: PMI07_000573
symbol: EUB98013.1
gene_biotype: protein_coding
description:
  PFAM: oxidoreductase domain protein, Oxidoreductase domain-containing protein; KEGG: oxidoreductase.


ensembl_gene_id: PMI07_000575
symbol: EUB96999.1
gene_biotype: protein_coding
description:
  PFAM: Carboxylesterase type B; KEGG: carboxylesterase type B; Belongs to the type-B carboxylesterase/lipase family.


ensembl_gene_id: PMI07_000578
symbol: EUB97002.1
gene_biotype: protein_coding
description:
  KEGG: diguanylate phosphodiesterase; PFAM: EAL domain-containing protein; SMART: EAL domain-containing protein.


ensembl_gene_id: PMI07_000579
symbol: metN
gene_biotype: protein_coding
description:
  Phosphonate-transporting ATPase; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.


ensembl_gene_id: PMI07_000582
symbol: EUB97006.1
gene_biotype: protein_coding
description:
  TIGRFAM: diguanylate cyclase; PFAM: EAL domain-containing protein, GGDEF domain containing protein, CHASE4 domain protein; KEGG: sensory box/GGDEF family protein (nitrogen fixation positive activator protein-like); SMART: EAL domain-containing protein, GGDEF domain containing protein.


ensembl_gene_id: PMI07_000585
symbol: EUB97009.1
gene_biotype: protein_coding
description:
  HAMAP : UPF0176 protein yceA; PFAM: Rhodanese-like protein; KEGG: hypothetical protein; SMART: Rhodanese-like protein; Belongs to the UPF0176 family.


ensembl_gene_id: PMI07_000586
symbol: EUB97010.1
gene_biotype: protein_coding
description:
  KEGG: hypothetical protein; PFAM: CHAD domain containing protein; SMART: CHAD domain containing protein.


ensembl_gene_id: PMI07_000588
symbol: EUB97012.1
gene_biotype: protein_coding
description:
  TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; KEGG: kdgA, keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; PFAM: KDPG and KHG aldolase.


ensembl_gene_id: PMI07_000591
symbol: EUB97015.1
gene_biotype: protein_coding
description:
  UPF0145 protein ybjQ; KEGG: hypothetical protein; HAMAP : UPF0145 protein ybjQ; PFAM: protein of unknown function DUF74; Belongs to the UPF0145 family.


ensembl_gene_id: PMI07_000595
symbol: EUB97019.1
gene_biotype: protein_coding
description:
  PFAM: high-affinity nickel-transporter; KEGG: hypothetical protein; Belongs to the NiCoT transporter (TC 2.A.52) family.


ensembl_gene_id: PMI07_000598
symbol: EUB97022.1
gene_biotype: protein_coding
description:
  Transcriptional regulator, LysR family; PFAM: LysR substrate-binding protein, regulatory protein LysR; KEGG: ptxR, LysR family transcriptional regulator.


ensembl_gene_id: PMI07_000599
symbol: EUB97023.1
gene_biotype: protein_coding
description:
  KEGG: speF, ornithine decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2, N-terminal, Orn/DAP/Arg decarboxylase 2, C-terminal; Belongs to the Orn/Lys/Arg decarboxylase class-II family.


ensembl_gene_id: PMI07_000602
symbol: asd
gene_biotype: protein_coding
description:
  Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.


ensembl_gene_id: PMI07_000603
symbol: EUB97027.1
gene_biotype: protein_coding
description:
  PFAM: Glutathione S-transferase domain-containing protein; KEGG: glutathione S-transferase; Belongs to the GST superfamily.


ensembl_gene_id: PMI07_000605
symbol: EUB97029.1
gene_biotype: protein_coding
description:
  PFAM: short-chain dehydrogenase/reductase SDR; KEGG: 3-oxoacyl-ACP reductase; SMART: Polyketide synthase/Fatty acid synthase, KR.


ensembl_gene_id: PMI07_000610
symbol: EUB97034.1
gene_biotype: protein_coding
description:
  TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: diguanylate cyclase; SMART: GGDEF domain containing protein.


ensembl_gene_id: PMI07_000611
symbol: EUB97035.1
gene_biotype: protein_coding
description:
  PFAM: WD-40 repeat-containing protein, WD40-like beta Propeller containing protein; KEGG: hypothetical protein.


ensembl_gene_id: PMI07_000614
symbol: vapC
gene_biotype: protein_coding
description:
  UPF0129 protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.


ensembl_gene_id: PMI07_000620
symbol: EUB97044.1
gene_biotype: protein_coding
description:
  KEGG: transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR.


ensembl_gene_id: PMI07_000621
symbol: EUB97045.1
gene_biotype: protein_coding
description:
  Gamma-glutamyl-gamma-aminobutyrate hydrolase; KEGG: glutamine amidotransferase protein; PFAM: peptidase C26.


ensembl_gene_id: PMI07_000622
symbol: EUB97046.1
gene_biotype: protein_coding
description:
  Extracellular solute-binding protein, family 7; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.


ensembl_gene_id: PMI07_000623
symbol: EUB97047.1
gene_biotype: protein_coding
description:
  KEGG: TRAP dicarboxylate transporter subunit DctM; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit.


ensembl_gene_id: PMI07_000624
symbol: EUB97048.1
gene_biotype: protein_coding
description:
  PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: transmembrane transporter component.


ensembl_gene_id: PMI07_000625
symbol: EUB97049.1
gene_biotype: protein_coding
description:
  Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: diguanylate cyclase, PAS sensor protein; PFAM: EAL domain-containing protein, GGDEF domain containing protein; KEGG: transmembrane sensory box GGDEF/EAL protein; SMART: EAL domain-containing protein, PAS domain containing protein, GGDEF domain containing protein.


ensembl_gene_id: PMI07_000628
symbol: EUB97052.1
gene_biotype: protein_coding
description:
  NAD(P)(+) transhydrogenase (AB-specific); PFAM: alanine dehydrogenase/PNT domain protein; KEGG: pntA, NAD(P) transhydrogenase subunit alpha; SMART: alanine dehydrogenase/PNT domain protein.


ensembl_gene_id: PMI07_000629
symbol: EUB97053.1
gene_biotype: protein_coding
description:
  PFAM: NAD(P) transhydrogenase, alpha subunit, C-terminal; KEGG: NAD(P) transhydrogenase subunit alpha.


ensembl_gene_id: PMI07_000630
symbol: EUB97054.1
gene_biotype: protein_coding
description:
  NAD(P)(+) transhydrogenase (AB-specific); The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family.


ensembl_gene_id: PMI07_000635
symbol: EUB97059.1
gene_biotype: protein_coding
description:
  KEGG: O-linked GlcNAc transferase; PFAM: Tetratricopeptide TPR_1 repeat-containing protein, Tetratricopeptide TPR_2 repeat-containing protein; SMART: Tetratricopeptide repeat-containing protein.


ensembl_gene_id: PMI07_000636
symbol: rpsU
gene_biotype: protein_coding
description:
  TIGRFAM: ribosomal protein S21; HAMAP : 30S ribosomal protein S21; KEGG: rpsU, 30S ribosomal protein S21; PFAM: ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.


ensembl_gene_id: PMI07_000638
symbol: EUB97062.1
gene_biotype: protein_coding
description:
  TIGRFAM: sarcosine oxidase, beta subunit family; KEGG: sarcosine oxidase subunit beta; PFAM: FAD dependent oxidoreductase.


ensembl_gene_id: PMI07_000639
symbol: EUB97063.1
gene_biotype: protein_coding
description:
  KEGG: soxDch, sarcosine oxidase subunit delta; TIGRFAM: sarcosine oxidase, delta subunit family; PFAM: Sarcosine oxidase delta subunit heterotetrameric.


ensembl_gene_id: PMI07_000640
symbol: EUB97064.1
gene_biotype: protein_coding
description:
  KEGG: sarcosine oxidase subunit alpha; TIGRFAM: sarcosine oxidase, alpha subunit family; PFAM: glycine cleavage T protein (aminomethyl transferase), Glycine cleavage T-protein barrel.


ensembl_gene_id: PMI07_000641
symbol: EUB97065.1
gene_biotype: protein_coding
description:
  KEGG: sarcosine oxidase, gamma subunit family; TIGRFAM: sarcosine oxidase, gamma subunit family; PFAM: Sarcosine oxidase gamma subunit.


ensembl_gene_id: PMI07_000647
symbol: EUB97071.1
gene_biotype: protein_coding
description:
  Glycogen debranching enzyme GlgX; SMART: alpha amylase catalytic sub domain-containing protein; TIGRFAM: glycogen debranching enzyme GlgX; KEGG: glgX, glycogen debranching protein GlgX; PFAM: glycoside hydrolase family 13 domain protein, alpha amylase catalytic region; Belongs to the glycosyl hydrolase 13 family.


ensembl_gene_id: PMI07_000648
symbol: EUB97072.1
gene_biotype: protein_coding
description:
  KEGG: exoC, phosphoglucomutase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I, phosphoglucomutase/phosphomannomutase, phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III, phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II.


ensembl_gene_id: PMI07_000650
symbol: glgC
gene_biotype: protein_coding
description:
  Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.


ensembl_gene_id: PMI07_000651
symbol: glgB
gene_biotype: protein_coding
description:
  1,4-alpha-glucan-branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.


ensembl_gene_id: PMI07_000652
symbol: EUB97076.1
gene_biotype: protein_coding
description:
  Glycogen/starch/alpha-glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.


ensembl_gene_id: PMI07_000654
symbol: EUB97078.1
gene_biotype: protein_coding
description:
  KEGG: hypothetical protein; PFAM: transglutaminase domain-containing protein, transglutaminase domain protein; SMART: transglutaminase domain-containing protein.


ensembl_gene_id: PMI07_000655
symbol: EUB97079.1
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF407, protein of unknown function DUF403; KEGG: hypothetical protein.


ensembl_gene_id: PMI07_000656
symbol: EUB97080.1
gene_biotype: protein_coding
description:
  KEGG: hypothetical protein; PFAM: Protein of unknown function DUF2126, transglutaminase domain protein, transglutaminase domain-containing protein; SMART: transglutaminase domain-containing protein.


ensembl_gene_id: PMI07_000658
symbol: EUB97082.1
gene_biotype: protein_coding
description:
  Sulfate-transporting ATPase; PFAM: ABC transporter related protein; KEGG: ABC-transporter ATP-binding protein system; SMART: AAA ATPase.


ensembl_gene_id: PMI07_000665
symbol: EUB97089.1
gene_biotype: protein_coding
description:
  PFAM: UvrD-like DNA helicase, Helicase superfamily 1 UvrD-related protein; KEGG: uvrD, ATP-dependent DNA helicase.


ensembl_gene_id: PMI07_000667
symbol: EUB97091.1
gene_biotype: protein_coding
description:
  RNA polymerase, sigma-24 subunit, ECF subfamily; KEGG: ECF sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2, sigma-70 region 2 domain protein.


ensembl_gene_id: PMI07_000670
symbol: fbpC
gene_biotype: protein_coding
description:
  Fe(3+)-transporting ATPase; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system.


ensembl_gene_id: PMI07_000671
symbol: EUB97095.1
gene_biotype: protein_coding
description:
  KEGG: hypothetical protein; HAMAP : UPF0391 membrane protein ytjA; PFAM: protein of unknown function DUF1328.


ensembl_gene_id: PMI07_000673
symbol: EUB97097.1
gene_biotype: protein_coding
description:
  KEGG: chemotaxis response regulator; PFAM: response regulator receiver; SMART: response regulator receiver.


ensembl_gene_id: PMI07_000675
symbol: EUB97099.1
gene_biotype: protein_coding
description:
  KEGG: inositol monophosphatase family protein; TIGRFAM: histidinol-phosphate phosphatase; PFAM: inositol monophosphatase.


ensembl_gene_id: PMI07_000678
symbol: EUB97102.1
gene_biotype: protein_coding
description:
  PFAM: heat shock protein Hsp20; KEGG: small heat shock protein ibpA; Belongs to the small heat shock protein (HSP20) family.


ensembl_gene_id: PMI07_000679
symbol: EUB97103.1
gene_biotype: protein_coding
description:
  Transcriptional regulator/antitoxin, MazE; KEGG: pemI family protein; PFAM: SpoVT/AbrB domain-containing protein; SMART: SpoVT/AbrB domain-containing protein.


ensembl_gene_id: PMI07_000681
symbol: EUB97105.1
gene_biotype: protein_coding
description:
  PFAM: Uncharacterized conserved protein UCP026166, sodium bile acid symporter; KEGG: transmembrane protein.


ensembl_gene_id: PMI07_000683
symbol: EUB97107.1
gene_biotype: protein_coding
description:
  Threonine aldolase; Catalyzes the cleavage of L-allo-threonine and L-threonine to glycine and acetaldehyde.


ensembl_gene_id: PMI07_000684
symbol: EUB97108.1
gene_biotype: protein_coding
description:
  KEGG: glutamate synthase, large subunit; PFAM: ferredoxin-dependent glutamate synthase, glutamine amidotransferase class-II, glutamate synthase, glutamate synthase alpha subunit domain protein.


ensembl_gene_id: PMI07_000685
symbol: EUB97109.1
gene_biotype: protein_coding
description:
  TIGRFAM: glutamate synthase, NADH/NADPH, small subunit; KEGG: glutamate synthase small subunit protein; PFAM: Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain.


ensembl_gene_id: PMI07_000687
symbol: EUB97111.1
gene_biotype: protein_coding
description:
  KEGG: mltB, lytic murein transglycosylase; TIGRFAM: lytic murein transglycosylase; PFAM: Peptidoglycan-binding domain 1 protein.


ensembl_gene_id: PMI07_000688
symbol: EUB97112.1
gene_biotype: protein_coding
description:
  TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; KEGG: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase.


ensembl_gene_id: PMI07_000689
symbol: EUB97113.1
gene_biotype: protein_coding
description:
  PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region, aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain-containing protein; KEGG: ornithine carbamoyltransferase.


ensembl_gene_id: PMI07_000691
symbol: EUB97115.1
gene_biotype: protein_coding
description:
  SMART: CBS domain containing protein; TIGRFAM: KpsF/GutQ family protein; KEGG: arabinose 5-phosphate isomerase; PFAM: sugar isomerase (SIS), CBS domain containing protein; Belongs to the SIS family. GutQ/KpsF subfamily.


ensembl_gene_id: PMI07_000694
symbol: queC
gene_biotype: protein_coding
description:
  7-cyano-7-deazaguanine synthase; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Belongs to the QueC family.


ensembl_gene_id: PMI07_000695
symbol: hemH
gene_biotype: protein_coding
description:
  Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.


ensembl_gene_id: PMI07_000696
symbol: EUB97120.1
gene_biotype: protein_coding
description:
  5'-nucleotidase, Ubiquitin thiolesterase; PFAM: 5'-Nucleotidase domain-containing protein, metallophosphoesterase, Peptidoglycan-binding lysin domain-containing protein; KEGG: 5'-nucleotidase domain protein; SMART: Peptidoglycan-binding LysM; Belongs to the 5'-nucleotidase family.


ensembl_gene_id: PMI07_000702
symbol: EUB97126.1
gene_biotype: protein_coding
description:
  TIGRFAM: para-aminobenzoate synthase, subunit I; KEGG: pabB, aminodeoxychorismate synthase, component I; PFAM: Chorismate binding domain-containing protein.


ensembl_gene_id: PMI07_000703
symbol: EUB97127.1
gene_biotype: protein_coding
description:
  Oligoendopeptidase, pepF/M3 family; KEGG: pepF, oligoendopeptidase F protein; TIGRFAM: oligoendopeptidase, pepF/M3 family; PFAM: peptidase M3A and M3B thimet/oligopeptidase F, Oligopeptidase F.


ensembl_gene_id: PMI07_000704
symbol: EUB97128.1
gene_biotype: protein_coding
description:
  Two component, sigma54 specific, transcriptional regulator, Fis family; KEGG: sigma 54 dependent transcriptional activator; PFAM: sigma-54 factor interaction domain-containing protein, helix-turn-helix Fis-type, response regulator receiver; SMART: response regulator receiver, AAA ATPase.


ensembl_gene_id: PMI07_000706
symbol: EUB97130.1
gene_biotype: protein_coding
description:
  KEGG: hypothetical protein; HAMAP : UPF0335 protein; PFAM: Protein of unknown function DUF2312; Belongs to the UPF0335 family.


ensembl_gene_id: PMI07_000710
symbol: EUB97134.1
gene_biotype: protein_coding
description:
  TIGRFAM: pyruvate kinase; KEGG: pykA, pyruvate kinase; PFAM: Pyruvate kinase barrel, Pyruvate kinase -like protein; Belongs to the pyruvate kinase family.


ensembl_gene_id: PMI07_000714
symbol: rpmJ
gene_biotype: protein_coding
description:
  TIGRFAM: ribosomal protein L36; HAMAP : 50S ribosomal protein L36; KEGG: 50S ribosomal protein L36; PFAM: ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family.


ensembl_gene_id: PMI07_000715
symbol: purK
gene_biotype: protein_coding
description:
  Phosphoribosylaminoimidazole carboxylase, ATPase subunit; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR).


ensembl_gene_id: PMI07_000716
symbol: purE
gene_biotype: protein_coding
description:
  Phosphoribosylaminoimidazole carboxylase, catalytic subunit; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).


ensembl_gene_id: PMI07_000719
symbol: EUB97143.1
gene_biotype: protein_coding
description:
  Transcriptional regulator, ArsR family; SMART: regulatory protein ArsR; KEGG: regulatory protein ArsR.


ensembl_gene_id: PMI07_000722
symbol: EUB97146.1
gene_biotype: protein_coding
description:
  KEGG: enhC, enhanced entry protein; PFAM: Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein.


ensembl_gene_id: PMI07_000729
symbol: EUB97153.1
gene_biotype: protein_coding
description:
  SMART: AAA ATPase; TIGRFAM: lipid A ABC exporter family, fused ATPase and inner membrane subunits; KEGG: ATP-binding component of ABC transporter; PFAM: ABC transporter transmembrane region, ABC transporter related protein.


ensembl_gene_id: PMI07_000730
symbol: rpmE
gene_biotype: protein_coding
description:
  50S ribosomal protein L31; Binds the 23S rRNA; Belongs to the bacterial ribosomal protein bL31 family. Type A subfamily.


ensembl_gene_id: PMI07_000736
symbol: EUB97160.1
gene_biotype: protein_coding
description:
  KEGG: phenazine biosynthesis protein PhzF family protein; TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein.


ensembl_gene_id: PMI07_000739
symbol: pgk
gene_biotype: protein_coding
description:
  HAMAP : Phosphoglycerate kinase; KEGG: pgk, phosphoglycerate kinase; PFAM: phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.


ensembl_gene_id: PMI07_000740
symbol: EUB97164.1
gene_biotype: protein_coding
description:
  TIGRFAM: diguanylate cyclase, PAS sensor protein; PFAM: GGDEF domain containing protein, PAS fold-4 domain protein; KEGG: putative signal protein with GAF, PAS(PAC) and GGDEF domains; SMART: GGDEF domain containing protein, PAC repeat-containing protein, PAS domain containing protein.


ensembl_gene_id: PMI07_000744
symbol: EUB97168.1
gene_biotype: protein_coding
description:
  SMART: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain-containing protein; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: gap, glyceraldehyde 3-phosphate dehydrogenase; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain-containing protein, Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain-containing protein; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: PMI07_000745
symbol: EUB97169.1
gene_biotype: protein_coding
description:
  Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.


ensembl_gene_id: PMI07_000747
symbol: EUB97171.1
gene_biotype: protein_coding
description:
  Protein of unknown function DUF710; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.


ensembl_gene_id: PMI07_000752
symbol: EUB97176.1
gene_biotype: protein_coding
description:
  Diguanylate cyclase with integral membrane sensor; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein, histidine kinase HAMP region domain protein; KEGG: diguanylate cyclase; SMART: GGDEF domain containing protein, histidine kinase HAMP region domain protein.


ensembl_gene_id: PMI07_000753
symbol: EUB97177.1
gene_biotype: protein_coding
description:
  Integral membrane sensor signal transduction histidine kinase; KEGG: two component sensor kinase; PFAM: CHASE3 domain protein, ATP-binding region ATPase domain protein, histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein.


ensembl_gene_id: PMI07_000755
symbol: EUB97179.1
gene_biotype: protein_coding
description:
  KEGG: fsrR, two component sensor kinase; PFAM: histidine kinase dimerization/phosphoacceptor, ATP-binding region ATPase domain protein, response regulator receiver; SMART: response regulator receiver, ATP-binding region ATPase domain protein, HWE histidine kinase.


ensembl_gene_id: PMI07_000756
symbol: EUB97180.1
gene_biotype: protein_coding
description:
  KEGG: hemolysin; PFAM: protein of unknown function DUF21, transporter-associated region, CBS domain containing protein; SMART: transporter-associated region.


ensembl_gene_id: PMI07_000757
symbol: EUB97181.1
gene_biotype: protein_coding
description:
  5-formyltetrahydrofolate cyclo-ligase; KEGG: 5,10-methenyltetrahydrofolate synthetase; TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase.


ensembl_gene_id: PMI07_000758
symbol: EUB97182.1
gene_biotype: protein_coding
description:
  KEGG: hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP00282; PFAM: Conserved hypothetical protein CHP00282.


ensembl_gene_id: PMI07_000761
symbol: EUB97185.1
gene_biotype: protein_coding
description:
  KEGG: DEAD/DEAH box helicase; PFAM: DEAD/DEAH box helicase domain protein, helicase domain-containing protein, DbpA RNA-binding domain protein; SMART: DEAD-like helicase, helicase domain-containing protein; Belongs to the DEAD box helicase family.


ensembl_gene_id: PMI07_000766
symbol: EUB97190.1
gene_biotype: protein_coding
description:
  UPF0082 protein yeeN; TIGRFAM: protein of unknown function DUF28; HAMAP : UPF0082 protein yeeN; KEGG: hypothetical protein; PFAM: protein of unknown function DUF28.


ensembl_gene_id: PMI07_000767
symbol: EUB97191.1
gene_biotype: protein_coding
description:
  KEGG: flavin dependent oxidoreductase; TIGRFAM: luciferase family oxidoreductase, group 1; PFAM: luciferase family protein.


ensembl_gene_id: PMI07_000768
symbol: EUB97192.1
gene_biotype: protein_coding
description:
  KEGG: mcpA, chemoreceptor McpA (methyl-accepting chemotaxis protein); PFAM: chemotaxis sensory transducer, histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer, histidine kinase HAMP region domain protein.


ensembl_gene_id: PMI07_000769
symbol: ruvC
gene_biotype: protein_coding
description:
  Crossover junction endodeoxyribonuclease ruvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.


ensembl_gene_id: PMI07_000770
symbol: EUB97194.1
gene_biotype: protein_coding
description:
  TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain-containing protein; KEGG: transcriptional regulator, AbrB family; SMART: SpoVT/AbrB domain-containing protein.


ensembl_gene_id: PMI07_000772
symbol: ruvA
gene_biotype: protein_coding
description:
  Holliday junction ATP-dependent DNA helicase ruvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.


ensembl_gene_id: PMI07_000773
symbol: EUB97197.1
gene_biotype: protein_coding
description:
  TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain-containing protein; KEGG: Regulators of stationary/sporulation gene expression protein; SMART: SpoVT/AbrB domain-containing protein.


ensembl_gene_id: PMI07_000775
symbol: ruvB
gene_biotype: protein_coding
description:
  Holliday junction ATP-dependent DNA helicase ruvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.


ensembl_gene_id: PMI07_000777
symbol: EUB97201.1
gene_biotype: protein_coding
description:
  PFAM: NUDIX hydrolase; KEGG: mutT, MutT/nudix family protein; Belongs to the Nudix hydrolase family.


ensembl_gene_id: PMI07_000782
symbol: EUB97206.1
gene_biotype: protein_coding
description:
  KEGG: sqdB, sulfolipid (UDP-sulfoquinovose) biosynthesis protein; PFAM: NAD-dependent epimerase/dehydratase.


ensembl_gene_id: PMI07_000783
symbol: EUB97207.1
gene_biotype: protein_coding
description:
  KEGG: 4-hydroxybenzoyl-CoA thioesterase; TIGRFAM: tol-pal system-associated acyl-CoA thioesterase, 4-hydroxybenzoyl-CoA thioesterase; PFAM: thioesterase superfamily protein.


ensembl_gene_id: PMI07_000785
symbol: tolQ
gene_biotype: protein_coding
description:
  Protein TolQ; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.


ensembl_gene_id: PMI07_000788
symbol: tolB
gene_biotype: protein_coding
description:
  Protein tolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.


ensembl_gene_id: PMI07_000789
symbol: pal
gene_biotype: protein_coding
description:
  Peptidoglycan-associated lipoprotein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.


ensembl_gene_id: PMI07_000790
symbol: cpoB
gene_biotype: protein_coding
description:
  Tol-pal system protein YbgF; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family.


ensembl_gene_id: PMI07_000791
symbol: tilS
gene_biotype: protein_coding
description:
  tRNA(Ile)-lysidine synthase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.


ensembl_gene_id: PMI07_000792
symbol: ftsH
gene_biotype: protein_coding
description:
  Peptidase M41 FtsH domain protein; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family.  In the central section; belongs to the AAA ATPase family.


ensembl_gene_id: PMI07_000793
symbol: glmM
gene_biotype: protein_coding
description:
  Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.


ensembl_gene_id: PMI07_000794
symbol: EUB97218.1
gene_biotype: protein_coding
description:
  KEGG: mcpGc, methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer, 4HB MCP domain, histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer, histidine kinase HAMP region domain protein.


ensembl_gene_id: PMI07_000796
symbol: EUB97220.1
gene_biotype: protein_coding
description:
  Phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine.


ensembl_gene_id: PMI07_000797
symbol: EUB97221.1
gene_biotype: protein_coding
description:
  TIGRFAM: D-3-phosphoglycerate dehydrogenase; KEGG: serA, D-3-phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein, D-isomer specific 2-hydroxyacid dehydrogenase catalytic region-containing protein.


ensembl_gene_id: PMI07_000799
symbol: EUB97223.1
gene_biotype: protein_coding
description:
  KEGG: hypothetical protein; PFAM: import inner membrane translocase subunit Tim44; SMART: import inner membrane translocase subunit Tim44.


ensembl_gene_id: PMI07_000802
symbol: mnmA
gene_biotype: protein_coding
description:
  tRNA-specific 2-thiouridylase mnmA; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.


ensembl_gene_id: PMI07_000803
symbol: EUB97227.1
gene_biotype: protein_coding
description:
  KEGG: site-specific DNA recombinase; PFAM: Resolvase domain-containing protein, Recombinase zinc beta ribbon domain, Recombinase; SMART: Resolvase domain-containing protein.


ensembl_gene_id: PMI07_000805
symbol: EUB97229.1
gene_biotype: protein_coding
description:
  KEGG: heat shock protein DnaJ domain-containing protein; PFAM: heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein.


ensembl_gene_id: PMI07_000816
symbol: EUB97240.1
gene_biotype: protein_coding
description:
  KEGG: exoX, DNA polymerase III subunit epsilon; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease.


ensembl_gene_id: PMI07_000818
symbol: EUB97242.1
gene_biotype: protein_coding
description:
  KEGG: RecT protein; TIGRFAM: RecT protein; PFAM: DNA single-strand annealing protein RecT-like protein.


ensembl_gene_id: PMI07_000823
symbol: EUB97247.1
gene_biotype: protein_coding
description:
  Putative phage repressor; KEGG: hypothetical protein; PFAM: Peptidase S24/S26A/S26B, conserved region; SMART: helix-turn-helix domain protein.


ensembl_gene_id: PMI07_000839
symbol: EUB97263.1
gene_biotype: protein_coding
description:
  PFAM: Methyltransferase domain; KEGG: putative DNA methyltransferase; Belongs to the methyltransferase superfamily.


ensembl_gene_id: PMI07_000843
symbol: EUB97267.1
gene_biotype: protein_coding
description:
  DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]


ensembl_gene_id: PMI07_000849
symbol: EUB97273.1
gene_biotype: protein_coding
description:
  PFAM: Putative metallopeptidase domain, Protein of unknown function DUF2201, metallopeptidase-related protein; KEGG: hypothetical protein.


ensembl_gene_id: PMI07_000855
symbol: EUB97279.1
gene_biotype: protein_coding
description:
  PFAM: ATPase associated with various cellular activities AAA_5; KEGG: ATPase associated with various cellular activities AAA_3.


ensembl_gene_id: PMI07_000873
symbol: EUB97297.1
gene_biotype: protein_coding
description:
  KEGG: phage portal protein, lambda family; TIGRFAM: phage portal protein, lambda family; PFAM: portal protein lambda.


ensembl_gene_id: PMI07_000892
symbol: EUB97316.1
gene_biotype: protein_coding
description:
  KEGG: TP901 family phage tail tape measure protein; TIGRFAM: phage tail tape measure protein, TP901 family; PFAM: tail tape measure protein TP901 core region-containing protein.


ensembl_gene_id: PMI07_000896
symbol: EUB97320.1
gene_biotype: protein_coding
description:
  PFAM: Protein of unknown function DUF3380, Peptidoglycan-binding domain 1 protein; KEGG: peptidoglycan-binding domain 1 protein.


ensembl_gene_id: PMI07_000908
symbol: EUB97332.1
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF159; KEGG: hypothetical protein; Belongs to the SOS response-associated peptidase family.


ensembl_gene_id: PMI07_000909
symbol: EUB97333.1
gene_biotype: protein_coding
description:
  KEGG: ATP-dependent DNA ligase; TIGRFAM: DNA polymerase LigD, ligase domain protein; PFAM: ATP dependent DNA ligase, ATP dependent DNA ligase domain protein.


ensembl_gene_id: PMI07_000913
symbol: EUB97337.1
gene_biotype: protein_coding
description:
  PFAM: Protein of unknown function DUF2083,transcriptional regulator, helix-turn-helix domain protein, protein of unknown function DUF955; KEGG: XRE family transcriptional regulator.


ensembl_gene_id: PMI07_000915
symbol: EUB97339.1
gene_biotype: protein_coding
description:
  Transcriptional regulator, AraC family; KEGG: hypothetical protein; PFAM: Helix-turn-helix, AraC domain-containing protein; SMART: Helix-turn-helix, AraC domain-containing protein.


ensembl_gene_id: PMI07_000916
symbol: EUB97340.1
gene_biotype: protein_coding
description:
  Galactonate dehydratase; PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: hypothetical protein; SMART: Mandelate racemase/muconate lactonizing protein.


ensembl_gene_id: PMI07_000920
symbol: EUB97344.1
gene_biotype: protein_coding
description:
  Galactonate dehydratase; PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: mandelate racemase/muconate lactonizing protein; SMART: Mandelate racemase/muconate lactonizing protein.


ensembl_gene_id: PMI07_000928
symbol: EUB97352.1
gene_biotype: protein_coding
description:
  PFAM: Xylose isomerase domain-containing protein TIM barrel; KEGG: inosose dehydratase 2-keto-myo-inositol dehydratase, 2KMI dehydratase.


ensembl_gene_id: PMI07_000929
symbol: EUB97353.1
gene_biotype: protein_coding
description:
  KEGG: putative monooxygenase; TIGRFAM: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family; PFAM: luciferase family protein.


ensembl_gene_id: PMI07_000930
symbol: EUB97354.1
gene_biotype: protein_coding
description:
  Taurine-transporting ATPase; PFAM: ABC transporter related protein; KEGG: aliphatic sulfonates ABC transporter; SMART: AAA ATPase.


ensembl_gene_id: PMI07_000931
symbol: EUB97355.1
gene_biotype: protein_coding
description:
  SMART: ABC-type transporter, periplasmic subunit family 3; KEGG: sulfate ester transport system substrate.


ensembl_gene_id: PMI07_000935
symbol: EUB97359.1
gene_biotype: protein_coding
description:
  PFAM: short-chain dehydrogenase/reductase SDR; KEGG: short-chain dehydrogenase/reductase; SMART: Polyketide synthase/Fatty acid synthase, KR.


ensembl_gene_id: PMI07_000943
symbol: EUB97367.1
gene_biotype: protein_coding
description:
  KEGG: putative NADH dehydrogenase FAD-containing subunit transmembrane protein; PFAM: Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain, FAD-dependent pyridine nucleotide-disulfide oxidoreductase.


ensembl_gene_id: PMI07_000944
symbol: EUB97368.1
gene_biotype: protein_coding
description:
  Malto-oligosyltrehalose synthase; SMART: alpha amylase catalytic sub domain-containing protein; TIGRFAM: malto-oligosyltrehalose synthase; KEGG: hypothetical protein; PFAM: alpha amylase catalytic region.


ensembl_gene_id: PMI07_000945
symbol: EUB97369.1
gene_biotype: protein_coding
description:
  Malto-oligosyltrehalose trehalohydrolase; SMART: alpha amylase catalytic sub domain-containing protein; TIGRFAM: malto-oligosyltrehalose trehalohydrolase; KEGG: hypothetical protein; PFAM: alpha amylase catalytic region, Domain of unknown function DUF3459, glycoside hydrolase family 13 domain protein.


ensembl_gene_id: PMI07_000947
symbol: EUB97371.1
gene_biotype: protein_coding
description:
  PFAM: short-chain dehydrogenase/reductase SDR; KEGG: putative short-chain dehydrogenase; SMART: Polyketide synthase/Fatty acid synthase, KR.


ensembl_gene_id: PMI07_000948
symbol: EUB97372.1
gene_biotype: protein_coding
description:
  KEGG: 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring); PFAM: dehydrogenase E1 component, 2-oxoisovalerate dehydrogenase, E1 alpha subunit, N-terminal.


ensembl_gene_id: PMI07_000949
symbol: EUB97373.1
gene_biotype: protein_coding
description:
  3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring); PFAM: Transketolase central region, Transketolase domain-containing protein; KEGG: bkdA2, 2-oxoisovalerate dehydrogenase subunit beta; SMART: Transketolase central region.


ensembl_gene_id: PMI07_000950
symbol: EUB97374.1
gene_biotype: protein_coding
description:
  Dihydrolipoyllysine-residue (2-methylpropanoyl)transferase; KEGG: hypothetical protein; PFAM: catalytic domain-containing protein, biotin/lipoyl attachment domain-containing protein, E3 binding domain-containing protein.


ensembl_gene_id: PMI07_000951
symbol: EUB97375.1
gene_biotype: protein_coding
description:
  TIGRFAM: dihydrolipoamide dehydrogenase; KEGG: dihydrolipoamide dehydrogenase; PFAM: pyridine nucleotide-disulfide oxidoreductase dimerization region, FAD-dependent pyridine nucleotide-disulfide oxidoreductase, Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain.


ensembl_gene_id: PMI07_000953
symbol: EUB97377.1
gene_biotype: protein_coding
description:
  PFAM: Calcineurin-like phosphoesterase superfamily domain; KEGG: serine/threonine-specific protein phosphatase.


ensembl_gene_id: PMI07_000957
symbol: EUB97381.1
gene_biotype: protein_coding
description:
  KEGG: heme utilization protein HuvX; TIGRFAM: protein of unknown function DUF1008; PFAM: protein of unknown function DUF1008.


ensembl_gene_id: PMI07_000959
symbol: EUB97383.1
gene_biotype: protein_coding
description:
  PFAM: ABC-type transporter, periplasmic subunit; KEGG: hmuT, hemin ABC transporter substrate-binding protein.


ensembl_gene_id: PMI07_000960
symbol: EUB97384.1
gene_biotype: protein_coding
description:
  PFAM: ABC-type transporter, integral membrane subunit; KEGG: hmuU, hemin ABC transporter transmembrane protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: PMI07_000961
symbol: hmuV
gene_biotype: protein_coding
description:
  Iron-chelate-transporting ATPase; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.


ensembl_gene_id: PMI07_000963
symbol: EUB97387.1
gene_biotype: protein_coding
description:
  TIGRFAM: UDP-glucose 4-epimerase; KEGG: galE_exoB, UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase, UDP-glucose 4-epimerase C-terminal domain; Belongs to the NAD(P)-dependent epimerase/dehydratase family.


ensembl_gene_id: PMI07_000964
symbol: ung
gene_biotype: protein_coding
description:
  Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.


ensembl_gene_id: PMI07_000970
symbol: EUB97394.1
gene_biotype: protein_coding
description:
  KEGG: multidrug resistance protein; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1.


ensembl_gene_id: PMI07_000978
symbol: EUB97402.1
gene_biotype: protein_coding
description:
  PFAM: FAD linked oxidase domain-containing protein; KEGG: FAD linked oxidase domain-containing protein.


ensembl_gene_id: PMI07_000981
symbol: EUB97405.1
gene_biotype: protein_coding
description:
  Taurine-transporting ATPase; PFAM: ABC transporter related protein; KEGG: ABC transporter-like protein; SMART: AAA ATPase.


ensembl_gene_id: PMI07_000986
symbol: EUB97410.1
gene_biotype: protein_coding
description:
  KEGG: mcpC, methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer, histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer, histidine kinase HAMP region domain protein.


ensembl_gene_id: PMI07_000988
symbol: purA
gene_biotype: protein_coding
description:
  Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.


ensembl_gene_id: PMI07_000991
symbol: EUB97415.1
gene_biotype: protein_coding
description:
  TIGRFAM: addiction module antidote protein, HigA family; PFAM: helix-turn-helix domain protein; KEGG: XRE family transcriptional regulator; SMART: helix-turn-helix domain protein.


ensembl_gene_id: PMI07_000993
symbol: rpoH
gene_biotype: protein_coding
description:
  RNA polymerase, sigma 32 subunit, RpoH; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes.


ensembl_gene_id: PMI07_000997
symbol: EUB97421.1
gene_biotype: protein_coding
description:
  KEGG: transcriptional regulator; PFAM: Helix-turn-helix, AraC domain-containing protein; SMART: Helix-turn-helix, AraC domain-containing protein.


ensembl_gene_id: PMI07_000998
symbol: EUB97422.1
gene_biotype: protein_coding
description:
  Pseudouridine synthase, RluA family; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: PMI07_001005
symbol: EUB97429.1
gene_biotype: protein_coding
description:
  KEGG: two-component response regulator protein; PFAM: response regulator receiver; SMART: response regulator receiver.


ensembl_gene_id: PMI07_001006
symbol: EUB97430.1
gene_biotype: protein_coding
description:
  Two component transcriptional regulator, winged helix family; KEGG: transcriptional regulator; PFAM: response regulator receiver, transcriptional regulator domain-containing protein; SMART: response regulator receiver, transcriptional regulator domain-containing protein.


ensembl_gene_id: PMI07_001013
symbol: EUB97437.1
gene_biotype: protein_coding
description:
  KEGG: sarcosine oxidase subunit beta; TIGRFAM: sarcosine oxidase, beta subunit family; PFAM: FAD dependent oxidoreductase.


ensembl_gene_id: PMI07_001015
symbol: EUB97439.1
gene_biotype: protein_coding
description:
  KEGG: sarcosine oxidase, alpha subunit; TIGRFAM: sarcosine oxidase, alpha subunit family; PFAM: glycine cleavage T protein (aminomethyl transferase), Glycine cleavage T-protein barrel.


ensembl_gene_id: PMI07_001018
symbol: EUB96684.1
gene_biotype: protein_coding
description:
  PFAM: ABC-type transporter, integral membrane subunit; KEGG: livH, ABC transporter, membrane spanning protein; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: PMI07_001019
symbol: EUB96685.1
gene_biotype: protein_coding
description:
  PFAM: ABC-type transporter, integral membrane subunit, Protein of unknown function DUF3382; KEGG: ABC transporter, membrane spanning protein (branched chain amino acid); Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: PMI07_001020
symbol: EUB96686.1
gene_biotype: protein_coding
description:
  Monosaccharide-transporting ATPase; PFAM: ABC transporter related protein; KEGG: ABC transporter, nucleotide binding/ATPase protein; SMART: AAA ATPase.


ensembl_gene_id: PMI07_001021
symbol: EUB96687.1
gene_biotype: protein_coding
description:
  Fe(3+)-transporting ATPase; PFAM: ABC transporter related protein; KEGG: livF, amino acid ABC transporter nucleotide-binding protein/ATPase; SMART: AAA ATPase.


ensembl_gene_id: PMI07_001024
symbol: EUB96690.1
gene_biotype: protein_coding
description:
  Two component transcriptional regulator, LuxR family; KEGG: two-component response regulator protein; PFAM: response regulator receiver, regulatory protein LuxR; SMART: response regulator receiver, regulatory protein LuxR.


ensembl_gene_id: PMI07_001025
symbol: EUB96691.1
gene_biotype: protein_coding
description:
  KEGG: two component sensor kinase; PFAM: ATP-binding region ATPase domain protein, histidine kinase A domain protein, response regulator receiver; SMART: ATP-binding region ATPase domain protein, histidine kinase A domain protein, response regulator receiver.


ensembl_gene_id: PMI07_001026
symbol: EUB96692.1
gene_biotype: protein_coding
description:
  PFAM: short-chain dehydrogenase/reductase SDR; KEGG: putative enzyme; SMART: Polyketide synthase/Fatty acid synthase, KR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: PMI07_001029
symbol: EUB96695.1
gene_biotype: protein_coding
description:
  DJ-1 domain, InhA-type; KEGG: AraC family transcriptional regulator; PFAM: DJ-1 domain, InhA-type, Helix-turn-helix, AraC domain-containing protein; SMART: Helix-turn-helix, AraC domain-containing protein.


ensembl_gene_id: PMI07_001030
symbol: EUB96696.1
gene_biotype: protein_coding
description:
  PFAM: alpha amylase catalytic region; KEGG: maltose alpha-D-glucosyltransferase; SMART: alpha amylase catalytic sub domain-containing protein.


ensembl_gene_id: PMI07_001033
symbol: EUB96699.1
gene_biotype: protein_coding
description:
  Flagellin domain protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.


ensembl_gene_id: PMI07_001034
symbol: EUB96700.1
gene_biotype: protein_coding
description:
  TIGRFAM: urea ABC transporter, urea binding protein; KEGG: ABC transporter, substrate binding protein (urea/amide).


ensembl_gene_id: PMI07_001035
symbol: EUB96701.1
gene_biotype: protein_coding
description:
  KEGG: urea/amide ABC transporter transmembrane protein; TIGRFAM: urea ABC transporter, permease protein UrtB; PFAM: ABC-type transporter, integral membrane subunit; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: PMI07_001036
symbol: EUB96702.1
gene_biotype: protein_coding
description:
  KEGG: urea/amide ABC transporter transmembrane protein; TIGRFAM: urea ABC transporter, permease protein UrtC; PFAM: ABC-type transporter, integral membrane subunit; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: PMI07_001037
symbol: EUB96703.1
gene_biotype: protein_coding
description:
  TIGRFAM: urea ABC transporter, ATP-binding protein UrtD; KEGG: urea/amide ABC transporter nucleotide-binding protein/ATPase; PFAM: ABC transporter related protein.


ensembl_gene_id: PMI07_001038
symbol: EUB96704.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: ribD, 5-amino-6-(5-phosphoribosylamino)uracil reductase/diaminohydroxyphosphoribosylaminopyrimidinedeami nase.


ensembl_gene_id: PMI07_001039
symbol: EUB96705.1
gene_biotype: protein_coding
description:
  SMART: AAA ATPase; TIGRFAM: urea ABC transporter, ATP-binding protein UrtE; KEGG: ABC transporter; PFAM: ABC transporter related protein.


ensembl_gene_id: PMI07_001041
symbol: ureD
gene_biotype: protein_coding
description:
  Urease accessory protein ureD; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.


ensembl_gene_id: PMI07_001042
symbol: ureA
gene_biotype: protein_coding
description:
  PFAM: Urease gamma subunit region; TIGRFAM: urease, gamma subunit; HAMAP : Urease subunit gamma; KEGG: ureA, urease subunit gamma; Belongs to the urease gamma subunit family.


ensembl_gene_id: PMI07_001044
symbol: ureB
gene_biotype: protein_coding
description:
  PFAM: Urease beta subunit; TIGRFAM: urease, beta subunit; HAMAP : Urease subunit beta; KEGG: ureB, urease subunit beta; Belongs to the urease beta subunit family.


ensembl_gene_id: PMI07_001046
symbol: EUB96712.1
gene_biotype: protein_coding
description:
  KEGG: AbrB family transcriptional regulator; TIGRFAM: transcriptional regulator, AbrB family; SMART: SpoVT/AbrB domain-containing protein.


ensembl_gene_id: PMI07_001048
symbol: ureC
gene_biotype: protein_coding
description:
  PFAM: amidohydrolase, Urease alpha-subunit domain-containing protein; TIGRFAM: urease, alpha subunit; HAMAP : Urease subunit alpha; KEGG: ureC, urease alpha subunit.


ensembl_gene_id: PMI07_001049
symbol: EUB96715.1
gene_biotype: protein_coding
description:
  KEGG: hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP02117; PFAM: Conserved hypothetical protein CHP02117.


ensembl_gene_id: PMI07_001050
symbol: ureE
gene_biotype: protein_coding
description:
  Urease accessory protein ureE; Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly. Belongs to the UreE family.


ensembl_gene_id: PMI07_001051
symbol: ureF
gene_biotype: protein_coding
description:
  Urease accessory protein ureF; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.


ensembl_gene_id: PMI07_001052
symbol: ureG
gene_biotype: protein_coding
description:
  Urease accessory protein ureG; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG.


ensembl_gene_id: PMI07_001053
symbol: EUB96719.1
gene_biotype: protein_coding
description:
  Transcriptional regulator, Crp/Fnr family; KEGG: regulator of Biofilm formation Fnr Family; PFAM: cyclic nucleotide-binding protein; SMART: cyclic nucleotide-binding protein, regulatory protein Crp.


ensembl_gene_id: PMI07_001054
symbol: EUB96720.1
gene_biotype: protein_coding
description:
  PFAM: acriflavin resistance protein; KEGG: Acr family transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: PMI07_001058
symbol: EUB96724.1
gene_biotype: protein_coding
description:
  PFAM: ABC-type transporter, integral membrane subunit; KEGG: ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.


ensembl_gene_id: PMI07_001059
symbol: EUB96725.1
gene_biotype: protein_coding
description:
  Taurine-transporting ATPase; PFAM: ABC transporter related protein; KEGG: ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component; SMART: AAA ATPase.


ensembl_gene_id: PMI07_001064
symbol: EUB96730.1
gene_biotype: protein_coding
description:
  TIGRFAM: amidase, hydantoinase/carbamoylase family; KEGG: amaB, allantoate amidohydrolase; PFAM: peptidase M20, peptidase dimerization domain protein.


ensembl_gene_id: PMI07_001065
symbol: EUB96731.1
gene_biotype: protein_coding
description:
  PFAM: Tetracycline transcriptional regulator YcdC domain-containing protein, regulatory protein TetR; KEGG: TetR family transcriptional regulator.


ensembl_gene_id: PMI07_001066
symbol: EUB96732.1
gene_biotype: protein_coding
description:
  Glutamate--ammonia ligase; KEGG: glnII, glutamine synthetase; PFAM: glutamine synthetase catalytic region, glutamine synthetase beta-Grasp.


ensembl_gene_id: PMI07_001074
symbol: EUB96740.1
gene_biotype: protein_coding
description:
  TIGRFAM: addiction module antidote protein, HigA family; PFAM: helix-turn-helix domain protein; KEGG: XRE family plasmid maintenance system antidote protein; SMART: helix-turn-helix domain protein.


ensembl_gene_id: PMI07_001076
symbol: EUB96742.1
gene_biotype: protein_coding
description:
  TIGRFAM: dihydroorotate dehydrogenase family protein; KEGG: dihydroorotate dehydrogenase family protein; PFAM: dihydroorotate oxidase, 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.


ensembl_gene_id: PMI07_001077
symbol: EUB96743.1
gene_biotype: protein_coding
description:
  Dihydropyrimidine dehydrogenase (NADP(+)); KEGG: oxidoreductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain.


ensembl_gene_id: PMI07_001083
symbol: EUB96749.1
gene_biotype: protein_coding
description:
  Monosaccharide-transporting ATPase; PFAM: ABC transporter related protein; KEGG: xylG, xylose ABC transporter; SMART: AAA ATPase.


ensembl_gene_id: PMI07_001084
symbol: EUB96750.1
gene_biotype: protein_coding
description:
  PFAM: ABC-type transporter, integral membrane subunit; KEGG: xylH, putative permease protein, ABC transporter; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: PMI07_001085
symbol: EUB96751.1
gene_biotype: protein_coding
description:
  KEGG: xylF, xylose ABC transporter, substrate-binding protein; TIGRFAM: D-xylose ABC transporter, periplasmic substrate-binding protein; PFAM: Periplasmic binding protein domain.


ensembl_gene_id: PMI07_001090
symbol: EUB96756.1
gene_biotype: protein_coding
description:
  KEGG: transglutaminase; PFAM: transglutaminase domain-containing protein, transglutaminase domain protein; SMART: transglutaminase domain-containing protein.


ensembl_gene_id: PMI07_001096
symbol: EUB96762.1
gene_biotype: protein_coding
description:
  KEGG: rhlE2, ATP-dependent RNA helicase; PFAM: DEAD/DEAH box helicase domain protein, helicase domain-containing protein; SMART: DEAD-like helicase, helicase domain-containing protein.


ensembl_gene_id: PMI07_001098
symbol: EUB96764.1
gene_biotype: protein_coding
description:
  PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein, histidine kinase A domain protein, PAS fold-4 domain protein, response regulator receiver; KEGG: two component sensor kinase/response regulator hybrid; SMART: ATP-binding region ATPase domain protein, histidine kinase A domain protein, PAS domain containing protein, response regulator receiver.


ensembl_gene_id: PMI07_001099
symbol: cheD
gene_biotype: protein_coding
description:
  CheD, deamidase, stimulates methylation of MCP protein; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.


ensembl_gene_id: PMI07_001105
symbol: EUB96771.1
gene_biotype: protein_coding
description:
  KEGG: putative AraC family transcriptional regulator; PFAM: AraC protein arabinose-binding/dimerization, Helix-turn-helix, AraC domain-containing protein; SMART: Helix-turn-helix, AraC domain-containing protein.


ensembl_gene_id: PMI07_001108
symbol: EUB96774.1
gene_biotype: protein_coding
description:
  TIGRFAM: urate catabolism protein; KEGG: urate catabolism protein; PFAM: polysaccharide deacetylase.


ensembl_gene_id: PMI07_001109
symbol: EUB96775.1
gene_biotype: protein_coding
description:
  OHCU decarboxylase; KEGG: hypothetical protein; TIGRFAM: OHCU decarboxylase; PFAM: Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase.


ensembl_gene_id: PMI07_001110
symbol: EUB96776.1
gene_biotype: protein_coding
description:
  PFAM: DNA polymerase beta domain protein region; KEGG: DNA polymerase, beta domain-containing protein region.


ensembl_gene_id: PMI07_001112
symbol: allA
gene_biotype: protein_coding
description:
  Ureidoglycolate hydrolase; Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source.


ensembl_gene_id: PMI07_001113
symbol: EUB96779.1
gene_biotype: protein_coding
description:
  TIGRFAM: hydroxyisourate hydrolase; KEGG: hypothetical protein; PFAM: Transthyretin/hydroxyisourate hydrolase, superfamily; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.


ensembl_gene_id: PMI07_001116
symbol: EUB96782.1
gene_biotype: protein_coding
description:
  KEGG: hypothetical protein; TIGRFAM: addiction module toxin, Txe/YoeB family; PFAM: Addiction module toxin Txe/YoeB.


ensembl_gene_id: PMI07_001126
symbol: EUB96792.1
gene_biotype: protein_coding
description:
  KEGG: iorA, isoquinoline 1-oxidoreductase subunit alpha; PFAM: [2Fe-2S]-binding domain-containing protein, ferredoxin.


ensembl_gene_id: PMI07_001135
symbol: EUB96801.1
gene_biotype: protein_coding
description:
  PFAM: ABC-type transporter, integral membrane subunit; KEGG: Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: PMI07_001137
symbol: EUB96803.1
gene_biotype: protein_coding
description:
  Fe(3+)-transporting ATPase; PFAM: ABC transporter related protein; KEGG: ABC transporter related protein; SMART: AAA ATPase.


ensembl_gene_id: PMI07_001138
symbol: EUB96804.1
gene_biotype: protein_coding
description:
  Monosaccharide-transporting ATPase; PFAM: ABC transporter related protein; KEGG: ABC transporter related protein; SMART: AAA ATPase.


ensembl_gene_id: PMI07_001142
symbol: EUB96808.1
gene_biotype: protein_coding
description:
  KEGG: SSS sodium solute transporter superfamily protein; TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.


ensembl_gene_id: PMI07_001143
symbol: EUB96809.1
gene_biotype: protein_coding
description:
  NADPH dehydrogenase; KEGG: NADH:flavin oxidoreductase; PFAM: NADH:flavin oxidoreductase/NADH oxidase.


ensembl_gene_id: PMI07_001144
symbol: EUB96810.1
gene_biotype: protein_coding
description:
  Taurine-transporting ATPase; PFAM: ABC transporter related protein; KEGG: NitT/TauT family transport system ATP-binding protein; SMART: AAA ATPase.


ensembl_gene_id: PMI07_001145
symbol: EUB96811.1
gene_biotype: protein_coding
description:
  PFAM: ABC-type transporter, integral membrane subunit; KEGG: NitT/TauT family transport system permease protein.


ensembl_gene_id: PMI07_001151
symbol: EUB96817.1
gene_biotype: protein_coding
description:
  Integral membrane sensor signal transduction histidine kinase; KEGG: Nodulation protein V; PFAM: ATP-binding region ATPase domain protein, histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein, histidine kinase A domain protein.


ensembl_gene_id: PMI07_001152
symbol: EUB96818.1
gene_biotype: protein_coding
description:
  KEGG: nodW, two component response regulator; PFAM: response regulator receiver, regulatory protein LuxR; SMART: response regulator receiver, regulatory protein LuxR.


ensembl_gene_id: PMI07_001155
symbol: EUB96821.1
gene_biotype: protein_coding
description:
  KEGG: Thioredoxin reductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain, cyclic nucleotide-binding protein.


ensembl_gene_id: PMI07_001157
symbol: EUB96823.1
gene_biotype: protein_coding
description:
  Isoquinoline 1-oxidoreductase; KEGG: (2Fe-2S)-binding protein; PFAM: [2Fe-2S]-binding domain-containing protein, ferredoxin.


ensembl_gene_id: PMI07_001158
symbol: EUB96824.1
gene_biotype: protein_coding
description:
  PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein; KEGG: putative oxidoreductase subunit protein; SMART: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead.


ensembl_gene_id: PMI07_001162
symbol: EUB96828.1
gene_biotype: protein_coding
description:
  PFAM: ABC-type transporter, integral membrane subunit; KEGG: branched-chain amino acid ABC transporter; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: PMI07_001164
symbol: EUB96830.1
gene_biotype: protein_coding
description:
  Phosphonate-transporting ATPase; PFAM: ABC transporter related protein; KEGG: nucleotide binding protein; SMART: AAA ATPase.


ensembl_gene_id: PMI07_001165
symbol: EUB96831.1
gene_biotype: protein_coding
description:
  KEGG: ABC transporter ATP-binding protein; PFAM: ABC transporter related protein; SMART: AAA ATPase.


ensembl_gene_id: PMI07_001167
symbol: EUB96833.1
gene_biotype: protein_coding
description:
  Transcriptional regulator, LysR family; PFAM: LysR substrate-binding protein, regulatory protein LysR; KEGG: LysR family transcriptional regulatory protein.


ensembl_gene_id: PMI07_001168
symbol: EUB96834.1
gene_biotype: protein_coding
description:
  5-oxoprolinase (ATP-hydrolyzing); KEGG: hyuA, hydantoin utilization protein a; PFAM: Hydantoinase/oxoprolinase, Hydantoinaseoxoprolinase domain protein.


ensembl_gene_id: PMI07_001169
symbol: EUB96835.1
gene_biotype: protein_coding
description:
  5-oxoprolinase (ATP-hydrolyzing); KEGG: hyuB, hydantoin utilization protein b; PFAM: Hydantoinase B/oxoprolinase.


ensembl_gene_id: PMI07_001170
symbol: EUB96836.1
gene_biotype: protein_coding
description:
  KEGG: 3-oxoacyl-; PFAM: short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: PMI07_001171
symbol: EUB96837.1
gene_biotype: protein_coding
description:
  PFAM: HpcH/HpaI aldolase; KEGG: HpcH/HpaI family aldolase; Belongs to the HpcH/HpaI aldolase family.


ensembl_gene_id: PMI07_001173
symbol: EUB96839.1
gene_biotype: protein_coding
description:
  TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family; KEGG: idnK, gluconokinase; PFAM: shikimate kinase.


ensembl_gene_id: PMI07_001174
symbol: EUB96840.1
gene_biotype: protein_coding
description:
  KEGG: glyoxylate reductase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein, D-isomer specific 2-hydroxyacid dehydrogenase catalytic region-containing protein.


ensembl_gene_id: PMI07_001175
symbol: EUB96841.1
gene_biotype: protein_coding
description:
  L-iditol 2-dehydrogenase; PFAM: Alcohol dehydrogenase GroES domain protein, Alcohol dehydrogenase zinc-binding domain protein; KEGG: Alcohol dehydrogenase GroES domain protein; SMART: Polyketide synthase, enoylreductase.


ensembl_gene_id: PMI07_001177
symbol: EUB96843.1
gene_biotype: protein_coding
description:
  KEGG: mcpA, methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer, histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer, histidine kinase HAMP region domain protein.


ensembl_gene_id: PMI07_001178
symbol: EUB96844.1
gene_biotype: protein_coding
description:
  Guanine deaminase; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia; Belongs to the metallo-dependent hydrolases superfamily. ATZ/TRZ family.


ensembl_gene_id: PMI07_001186
symbol: EUB96852.1
gene_biotype: protein_coding
description:
  KEGG: xdhC, xanthine dehydrogenase accessory protein XdhC; TIGRFAM: xanthine dehydrogenase accessory protein XdhC; PFAM: XshC-Cox1-family protein.


ensembl_gene_id: PMI07_001188
symbol: EUB96854.1
gene_biotype: protein_coding
description:
  Xanthine dehydrogenase, molybdopterin binding subunit; SMART: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; TIGRFAM: xanthine dehydrogenase, molybdopterin binding subunit; KEGG: xdhB, xanthine dehydrogenase molybdopterin binding subunit; PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein, aldehyde oxidase and xanthine dehydrogenase a/b hammerhead.


ensembl_gene_id: PMI07_001190
symbol: EUB96856.1
gene_biotype: protein_coding
description:
  Xanthine dehydrogenase, small subunit; SMART: CO dehydrogenase flavoprotein domain protein; TIGRFAM: xanthine dehydrogenase, small subunit; KEGG: xdhA, xanthine dehydrogenase; PFAM: molybdopterin dehydrogenase FAD-binding protein, [2Fe-2S]-binding domain-containing protein, CO dehydrogenase flavoprotein domain protein.


ensembl_gene_id: PMI07_001191
symbol: EUB96857.1
gene_biotype: protein_coding
description:
  KEGG: bdhA, D-beta-hydroxybutyrate dehydrogenase; TIGRFAM: 3-hydroxybutyrate dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR.


ensembl_gene_id: PMI07_001193
symbol: glpK
gene_biotype: protein_coding
description:
  Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.


ensembl_gene_id: PMI07_001194
symbol: EUB96860.1
gene_biotype: protein_coding
description:
  Serine-type D-Ala-D-Ala carboxypeptidase; KEGG: D-alanyl-D-alanine carboxypeptidase (penicillin binding protein); PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1, Sporulation domain-containing protein; Belongs to the peptidase S11 family.


ensembl_gene_id: PMI07_001197
symbol: EUB96863.1
gene_biotype: protein_coding
description:
  KEGG: addiction module antidote protein, CopG/Arc/MetJ family; TIGRFAM: addiction module antidote protein, CC2985 family; PFAM: Uncharacterized protein family UPF0156/MetJ /Arc repressor.


ensembl_gene_id: PMI07_001198
symbol: EUB96864.1
gene_biotype: protein_coding
description:
  PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: glutathione-dependent formaldehyde-activating protein.


ensembl_gene_id: PMI07_001200
symbol: EUB96866.1
gene_biotype: protein_coding
description:
  KEGG: beta-lactamase domain-containing protein; PFAM: beta-lactamase domain protein; SMART: beta-lactamase domain protein.


ensembl_gene_id: PMI07_001201
symbol: EUB96867.1
gene_biotype: protein_coding
description:
  KEGG: putative transcriptional regulator, AraC family; PFAM: Helix-turn-helix, AraC domain-containing protein, AraC-type transcriptional regulator domain protein; SMART: Helix-turn-helix, AraC domain-containing protein.


ensembl_gene_id: PMI07_001203
symbol: EUB96869.1
gene_biotype: protein_coding
description:
  Putative RNA polymerase, sigma-24 subunit, ECF subfamily; KEGG: RNA polymerase sigma factor protein (sigma-70); TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein, Sigma-70 region 4 type 2.


ensembl_gene_id: PMI07_001206
symbol: EUB96872.1
gene_biotype: protein_coding
description:
  TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein, response regulator receiver; KEGG: two component response regulator; SMART: GGDEF domain containing protein, response regulator receiver.


ensembl_gene_id: PMI07_001208
symbol: map
gene_biotype: protein_coding
description:
  Methionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.


ensembl_gene_id: PMI07_001212
symbol: EUB96878.1
gene_biotype: protein_coding
description:
  PFAM: Excinuclease ABC C subunit domain protein; KEGG: putative endonuclease containing a URI domain.


ensembl_gene_id: PMI07_001215
symbol: der
gene_biotype: protein_coding
description:
  GTP-binding protein engA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.


ensembl_gene_id: PMI07_001221
symbol: EUB96887.1
gene_biotype: protein_coding
description:
  KEGG: alpha-glucosidase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain-containing protein.


ensembl_gene_id: PMI07_001222
symbol: EUB96888.1
gene_biotype: protein_coding
description:
  KEGG: AraC-like transcriptional regulator; PFAM: AraC-type transcriptional regulator domain protein, Helix-turn-helix, AraC domain-containing protein; SMART: Helix-turn-helix, AraC domain-containing protein.


ensembl_gene_id: PMI07_001225
symbol: EUB96891.1
gene_biotype: protein_coding
description:
  KEGG: hypothetical protein; TIGRFAM: protein of unknown function DUF132; SMART: Nucleotide binding protein PINc.


ensembl_gene_id: PMI07_001227
symbol: ade-2
gene_biotype: protein_coding
description:
  PFAM: Adenine deaminase C-terminal domain, amidohydrolase; TIGRFAM: adenine deaminase; HAMAP : Adenine deaminase; KEGG: ade, adenine deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family.


ensembl_gene_id: PMI07_001229
symbol: EUB96895.1
gene_biotype: protein_coding
description:
  KEGG: AsnC family transcriptional regulator; PFAM: Transcription regulator, AsnC-type; SMART: Transcription regulator, AsnC-type.


ensembl_gene_id: PMI07_001234
symbol: EUB96900.1
gene_biotype: protein_coding
description:
  Beta-alanine--pyruvate transaminase; KEGG: omega-amino acid--pyruvate aminotransferase; PFAM: aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: PMI07_001235
symbol: EUB96901.1
gene_biotype: protein_coding
description:
  KEGG: signal transduction histidine kinase; PFAM: HWE histidine kinase, GAF domain protein, PAS fold-3 domain protein; SMART: HWE histidine kinase, PAC repeat-containing protein, GAF domain protein.


ensembl_gene_id: PMI07_001236
symbol: EUB96902.1
gene_biotype: protein_coding
description:
  KEGG: response regulator receiver domain-containing protein; PFAM: response regulator receiver; SMART: response regulator receiver.


ensembl_gene_id: PMI07_001237
symbol: EUB96903.1
gene_biotype: protein_coding
description:
  Transcriptional regulator, ArsR family; KEGG: nolR, nodulation protein NolR; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR.


ensembl_gene_id: PMI07_001239
symbol: EUB96905.1
gene_biotype: protein_coding
description:
  SMART: AAA ATPase; TIGRFAM: choline ABC transporter, ATP-binding protein; KEGG: opuA, glycine betaine/L-proline ABC transporter,ATP-binding protein, putative; PFAM: ABC transporter related protein.


ensembl_gene_id: PMI07_001240
symbol: EUB96906.1
gene_biotype: protein_coding
description:
  KEGG: proW, proline/glycine betaine ABC transporter permease; TIGRFAM: choline ABC transporter, permease protein; PFAM: ABC-type transporter, integral membrane subunit.


ensembl_gene_id: PMI07_001241
symbol: EUB96907.1
gene_biotype: protein_coding
description:
  KEGG: choline ABC transporter, periplasmic binding protein; TIGRFAM: choline ABC transporter, periplasmic binding protein; PFAM: ABC-type glycine betaine transport, periplasmic subunit.


ensembl_gene_id: PMI07_001247
symbol: EUB96913.1
gene_biotype: protein_coding
description:
  KEGG: LuxR family transcriptional regulator; PFAM: regulatory protein LuxR, Autoinducer-binding domain protein; SMART: regulatory protein LuxR.


ensembl_gene_id: PMI07_001249
symbol: EUB96915.1
gene_biotype: protein_coding
description:
  Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: PMI07_001250
symbol: EUB96916.1
gene_biotype: protein_coding
description:
  KEGG: TonB-dependent hemoglobin/transferrin/lactoferrin family receptor; TIGRFAM: TonB-dependent hemoglobin/transferrin/lactoferrin family receptor, TonB-dependent heme/hemoglobin receptor family protein; PFAM: TonB-dependent receptor, TonB-dependent receptor plug.


ensembl_gene_id: PMI07_001251
symbol: fhs
gene_biotype: protein_coding
description:
  HAMAP : Formate--tetrahydrofolate ligase; KEGG: fhs, formate--tetrahydrofolate ligase; PFAM: formate-tetrahydrofolate ligase FTHFS; Belongs to the formate--tetrahydrofolate ligase family.


ensembl_gene_id: PMI07_001255
symbol: EUB96921.1
gene_biotype: protein_coding
description:
  TIGRFAM: anthranilate synthase, glutamine amidotransferase of anthranilate synthase; KEGG: trpE, anthranilate synthase; PFAM: Chorismate binding domain-containing protein, Glutamine amidotransferase type 1, Anthranilate synthase component I domain protein.


ensembl_gene_id: PMI07_001259
symbol: EUB96925.1
gene_biotype: protein_coding
description:
  TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: outer membrane autotransporter; SMART: Autotransporter beta- domain protein.


ensembl_gene_id: PMI07_001260
symbol: EUB96926.1
gene_biotype: protein_coding
description:
  KEGG: cation efflux system protein; TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.


ensembl_gene_id: PMI07_001261
symbol: queF
gene_biotype: protein_coding
description:
  NADPH-dependent 7-cyano-7-deazaguanine reductase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1). Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily.


ensembl_gene_id: PMI07_001264
symbol: clpP
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: PMI07_001266
symbol: EUB96932.1
gene_biotype: protein_coding
description:
  Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: diguanylate cyclase; PFAM: EAL domain-containing protein, CHASE domain protein, PAS fold-3 domain protein, GGDEF domain containing protein; KEGG: putative sensory box/GGDEF family protein; SMART: EAL domain-containing protein, GGDEF domain containing protein, CHASE domain protein.


ensembl_gene_id: PMI07_001269
symbol: EUB96935.1
gene_biotype: protein_coding
description:
  KEGG: benzoate transport protein; TIGRFAM: benzoate transporter; PFAM: Benzoate membrane transport protein.


ensembl_gene_id: PMI07_001270
symbol: leuA
gene_biotype: protein_coding
description:
  2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 2 subfamily.


ensembl_gene_id: PMI07_001273
symbol: EUB96939.1
gene_biotype: protein_coding
description:
  RNA polymerase, sigma-24 subunit, ECF subfamily; KEGG: sige3, RNA polymerase sigma-E factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein, Sigma-70 region 4 type 2; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: PMI07_001282
symbol: EUB96948.1
gene_biotype: protein_coding
description:
  KEGG: transmembrane protein; TIGRFAM: double-transmembrane region domain protein; PFAM: Domain of unknown function DUF4159, Aerotolerance regulator N-terminal.


ensembl_gene_id: PMI07_001287
symbol: EUB96953.1
gene_biotype: protein_coding
description:
  KEGG: papS, tRNA nucleotidyltransferase; PFAM: Polynucleotide adenylyltransferase region; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.


ensembl_gene_id: PMI07_001290
symbol: hemF
gene_biotype: protein_coding
description:
  Coproporphyrinogen-III oxidase, aerobic; Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen- IX.


ensembl_gene_id: PMI07_001293
symbol: EUB96959.1
gene_biotype: protein_coding
description:
  TIGRFAM: redox-sensitive transcriptional activator SoxR; PFAM: Transcription regulator MerR DNA binding protein, regulatory protein MerR; KEGG: soxR, redox-sensitive transcriptional activator SoxR; SMART: regulatory protein MerR.


ensembl_gene_id: PMI07_001294
symbol: trmL
gene_biotype: protein_coding
description:
  S-adenosyl-L-methionine dependent tRNA/rRNA methyltransferase, SpoU; Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S-adenosyl-L-methionine to the 2'-OH of the wobble nucleotide.


ensembl_gene_id: PMI07_001295
symbol: EUB96961.1
gene_biotype: protein_coding
description:
  Xenobiotic-transporting ATPase; PFAM: ABC transporter related protein, ABC transporter transmembrane region; KEGG: ABC transporter ATP-binding protein; SMART: AAA ATPase.


ensembl_gene_id: PMI07_001296
symbol: EUB96962.1
gene_biotype: protein_coding
description:
  KEGG: methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer, histidine kinase HAMP region domain protein, 4HB MCP domain; SMART: chemotaxis sensory transducer, histidine kinase HAMP region domain protein.


ensembl_gene_id: PMI07_001297
symbol: EUB96963.1
gene_biotype: protein_coding
description:
  Xenobiotic-transporting ATPase; PFAM: ABC transporter related protein, ABC transporter transmembrane region; KEGG: multidrug ABC transporter nucleotide-binding protein/ATPase; SMART: AAA ATPase.


ensembl_gene_id: PMI07_001299
symbol: EUB96965.1
gene_biotype: protein_coding
description:
  Ubiquinol-cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.


ensembl_gene_id: PMI07_001300
symbol: EUB96966.1
gene_biotype: protein_coding
description:
  Cytochrome b/b6 domain-containing protein; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.


ensembl_gene_id: PMI07_001302
symbol: apt
gene_biotype: protein_coding
description:
  Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.


ensembl_gene_id: PMI07_001303
symbol: EUB96969.1
gene_biotype: protein_coding
description:
  PFAM: MaoC domain protein dehydratase; KEGG: Acyl dehydratase; overlaps another CDS with the same product name.


ensembl_gene_id: PMI07_001304
symbol: EUB96970.1
gene_biotype: protein_coding
description:
  PFAM: MaoC domain protein dehydratase; KEGG: MaoC family protein; overlaps another CDS with the same product name.


ensembl_gene_id: PMI07_001306
symbol: ychF
gene_biotype: protein_coding
description:
  GTP-binding protein YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.


ensembl_gene_id: PMI07_001309
symbol: clpS
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease adapter protein clpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.


ensembl_gene_id: PMI07_001310
symbol: EUB96976.1
gene_biotype: protein_coding
description:
  TIGRFAM: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific, modification methylase, HemK family; KEGG: prmB, N5-glutamine methyltransferase; PFAM: methyltransferase small; Belongs to the protein N5-glutamine methyltransferase family.


ensembl_gene_id: PMI07_001312
symbol: pth
gene_biotype: protein_coding
description:
  Peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.


ensembl_gene_id: PMI07_001313
symbol: EUB96979.1
gene_biotype: protein_coding
description:
  PFAM: ABC-type transporter, periplasmic subunit family 3; KEGG: amino acid ABC transporter substrate-binding protein.


ensembl_gene_id: PMI07_001314
symbol: EUB96980.1
gene_biotype: protein_coding
description:
  Diguanylate cyclase/phosphodiesterase with PAS/PAC and integral membrane sensor(s); TIGRFAM: diguanylate cyclase, PAS sensor protein; PFAM: EAL domain-containing protein, histidine kinase HAMP region domain protein, GGDEF domain containing protein; KEGG: diguanylate cyclase; SMART: EAL domain-containing protein, GGDEF domain containing protein, PAS domain containing protein, histidine kinase HAMP region domain protein.


ensembl_gene_id: PMI07_001315
symbol: rplY
gene_biotype: protein_coding
description:
  50S ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.


ensembl_gene_id: PMI07_001317
symbol: EUB96983.1
gene_biotype: protein_coding
description:
  Transcriptional regulator, HxlR family; PFAM: helix-turn-helix HxlR type; KEGG: Uncharacterized HTH-type transcriptional regulator Rv3095/MT3179.


ensembl_gene_id: PMI07_001318
symbol: EUB96984.1
gene_biotype: protein_coding
description:
  PFAM: short-chain dehydrogenase/reductase SDR; KEGG: short chain dehydrogenase; SMART: Polyketide synthase/Fatty acid synthase, KR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: PMI07_001319
symbol: EUB96985.1
gene_biotype: protein_coding
description:
  NADPH:quinone reductase; PFAM: Alcohol dehydrogenase GroES domain protein; KEGG: alcohol dehydrogenase, zinc-containing; SMART: Polyketide synthase, enoylreductase.


ensembl_gene_id: PMI07_001320
symbol: EUB96986.1
gene_biotype: protein_coding
description:
  Diguanylate cyclase/phosphodiesterase with MHYT sensor; TIGRFAM: diguanylate cyclase; PFAM: EAL domain-containing protein, GGDEF domain containing protein, MHYT domain protein; KEGG: diguanylate cyclase; SMART: EAL domain-containing protein, GGDEF domain containing protein.


ensembl_gene_id: PMI07_001323
symbol: prs
gene_biotype: protein_coding
description:
  Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.


ensembl_gene_id: PMI07_001326
symbol: EUB96992.1
gene_biotype: protein_coding
description:
  KEGG: hypothetical protein; TIGRFAM: Multi-copper polyphenol oxidoreductase, laccase; PFAM: Multi-copper polyphenol oxidoreductase, laccase; Belongs to the multicopper oxidase YfiH/RL5 family.


ensembl_gene_id: PMI07_001328
symbol: lgt
gene_biotype: protein_coding
description:
  Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.


ensembl_gene_id: PMI07_001331
symbol: proC
gene_biotype: protein_coding
description:
  Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.


ensembl_gene_id: PMI07_001332
symbol: EUB96998.1
gene_biotype: protein_coding
description:
  KEGG: csaA, chaperone protein; TIGRFAM: export-related chaperone CsaA; PFAM: t-RNA-binding domain-containing protein.


ensembl_gene_id: PMI07_001334
symbol: EUB96435.1
gene_biotype: protein_coding
description:
  Integral membrane sensor signal transduction histidine kinase; KEGG: two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein, histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein, histidine kinase HAMP region domain protein, histidine kinase A domain protein.


ensembl_gene_id: PMI07_001335
symbol: EUB96436.1
gene_biotype: protein_coding
description:
  Two component transcriptional regulator, winged helix family; KEGG: petR, two component response regulator; PFAM: response regulator receiver, transcriptional regulator domain-containing protein; SMART: response regulator receiver, transcriptional regulator domain-containing protein.


ensembl_gene_id: PMI07_001340
symbol: EUB96441.1
gene_biotype: protein_coding
description:
  KEGG: cspA, cold shock protein; PFAM: Cold-shock protein DNA-binding protein; SMART: Cold shock protein.


ensembl_gene_id: PMI07_001341
symbol: EUB96442.1
gene_biotype: protein_coding
description:
  Diguanylate phosphodiesterase; KEGG: hypothetical protein; PFAM: EAL domain-containing protein; SMART: EAL domain-containing protein.


ensembl_gene_id: PMI07_001347
symbol: EUB96448.1
gene_biotype: protein_coding
description:
  PFAM: Methionine synthase vitamin-B12 independent; KEGG: methionine synthase, vitamin-B12 independent.


ensembl_gene_id: PMI07_001355
symbol: EUB96456.1
gene_biotype: protein_coding
description:
  TIGRFAM: thioredoxin reductase; KEGG: trxB, thioredoxin reductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain, FAD-dependent pyridine nucleotide-disulfide oxidoreductase.


ensembl_gene_id: PMI07_001356
symbol: EUB96457.1
gene_biotype: protein_coding
description:
  Transcriptional regulator, AsnC family; KEGG: lrp, leucine-responsive transcriptional regulator protein; PFAM: Transcription regulator, AsnC-type; SMART: Transcription regulator, AsnC-type.


ensembl_gene_id: PMI07_001358
symbol: EUB96459.1
gene_biotype: protein_coding
description:
  PFAM: glycosyl transferase group 1; KEGG: lpsE, lipopolysaccharide core biosynthesis glycosyl transferase LpsE.


ensembl_gene_id: PMI07_001360
symbol: greA
gene_biotype: protein_coding
description:
  Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.


ensembl_gene_id: PMI07_001361
symbol: EUB96462.1
gene_biotype: protein_coding
description:
  KEGG: hypothetical protein; TIGRFAM: DNA modification/repair radical SAM protein, putative; SMART: Elongator protein 3/MiaB/NifB.


ensembl_gene_id: PMI07_001362
symbol: EUB96463.1
gene_biotype: protein_coding
description:
  TIGRFAM: SPO1 DNA polymerase-related protein, phage SPO1 DNA polymerase-related protein, DNA metabolism protein, putative; PFAM: Domain of unknown function DUF4130, Uracil-DNA glycosylase superfamily; KEGG: hypothetical protein; SMART: Uracil-DNA glycosylase superfamily.


ensembl_gene_id: PMI07_001365
symbol: carB
gene_biotype: protein_coding
description:
  KEGG: carB, carbamoyl phosphate synthase large subunit; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding protein, Carbamoyl-phosphate synthetase large chain oligomerisation, MGS domain protein, Carbamoyl-phosphate synthetase large chain domain protein; TIGRFAM: carbamoyl-phosphate synthase, large subunit; HAMAP : Carbamoyl-phosphate synthase large subunit glutamine-dependent; SMART: Carbamoyl-phosphate synthetase large chain oligomerisation, MGS domain protein; Belongs to the CarB family.


ensembl_gene_id: PMI07_001366
symbol: EUB96467.1
gene_biotype: protein_coding
description:
  Transcriptional regulator, LytTR family; KEGG: hypothetical protein; PFAM: LytTr DNA-binding region; SMART: LytTr DNA-binding region.


ensembl_gene_id: PMI07_001375
symbol: EUB96476.1
gene_biotype: protein_coding
description:
  KEGG: MATE efflux family protein; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE.


ensembl_gene_id: PMI07_001377
symbol: carA
gene_biotype: protein_coding
description:
  KEGG: carbamoyl phosphate synthase small subunit; PFAM: Carbamoyl-phosphate synthase small chain, Glutamine amidotransferase type 1; TIGRFAM: carbamoyl-phosphate synthase, small subunit; HAMAP : Carbamoyl-phosphate synthase small chain; SMART: Carbamoyl-phosphate synthase small chain; Belongs to the CarA family.


ensembl_gene_id: PMI07_001381
symbol: dnaG
gene_biotype: protein_coding
description:
  DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.


ensembl_gene_id: PMI07_001383
symbol: rpoD
gene_biotype: protein_coding
description:
  RNA polymerase, sigma 70 subunit, RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.


ensembl_gene_id: PMI07_001389
symbol: EUB96490.1
gene_biotype: protein_coding
description:
  PFAM: Alcohol dehydrogenase GroES domain protein, Alcohol dehydrogenase zinc-binding domain protein; KEGG: alcohol dehydrogenase zinc-binding domain-containing protein; SMART: Polyketide synthase, enoylreductase.


ensembl_gene_id: PMI07_001393
symbol: EUB96494.1
gene_biotype: protein_coding
description:
  KEGG: hypothetical protein; TIGRFAM: protein of unknown function UPF0047; PFAM: protein of unknown function UPF0047.


ensembl_gene_id: PMI07_001396
symbol: EUB96497.1
gene_biotype: protein_coding
description:
  KEGG: resolvase; PFAM: Resolvase domain-containing protein, Recombinase; SMART: Resolvase domain-containing protein.


ensembl_gene_id: PMI07_001399
symbol: EUB96500.1
gene_biotype: protein_coding
description:
  KEGG: DNA methylase N-4/N-6 domain-containing protein; PFAM: DNA methylase N-4/N-6 domain protein, ParB domain protein nuclease; SMART: ParB domain protein nuclease.


ensembl_gene_id: PMI07_001406
symbol: EUB96507.1
gene_biotype: protein_coding
description:
  KEGG: transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein.


ensembl_gene_id: PMI07_001409
symbol: EUB96510.1
gene_biotype: protein_coding
description:
  Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.


ensembl_gene_id: PMI07_001410
symbol: EUB96511.1
gene_biotype: protein_coding
description:
  dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family.


ensembl_gene_id: PMI07_001411
symbol: EUB96512.1
gene_biotype: protein_coding
description:
  TIGRFAM: dTDP-glucose 4,6-dehydratase; KEGG: rffB, dTDP-D-glucose-46-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.


ensembl_gene_id: PMI07_001412
symbol: EUB96513.1
gene_biotype: protein_coding
description:
  dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.


ensembl_gene_id: PMI07_001418
symbol: EUB96519.1
gene_biotype: protein_coding
description:
  PFAM: Capsule polysaccharide biosynthesis protein; KEGG: rkpZ1, probabable lipopolysaccharide processing protein.


ensembl_gene_id: PMI07_001423
symbol: EUB96524.1
gene_biotype: protein_coding
description:
  PFAM: IstB domain protein ATP-binding protein; KEGG: IS21 family insertion sequence ATP-binding protein.


ensembl_gene_id: PMI07_001424
symbol: EUB96525.1
gene_biotype: protein_coding
description:
  PFAM: transposase IS111A/IS1328/IS1533, transposase IS3/IS911 family protein; KEGG: transposase IS116/IS110/IS902.


ensembl_gene_id: PMI07_001427
symbol: EUB96528.1
gene_biotype: protein_coding
description:
  PFAM: transposase IS66, Transposase TnpC, homeodomain, Transposase IS66, predicted helix-turn-helix domain; KEGG: IS66 insertion sequence transposase.


ensembl_gene_id: PMI07_001430
symbol: EUB96531.1
gene_biotype: protein_coding
description:
  KEGG: FkbM family methyltransferase; TIGRFAM: methyltransferase FkbM family; PFAM: methyltransferase FkbM domain protein.


ensembl_gene_id: PMI07_001435
symbol: EUB96536.1
gene_biotype: protein_coding
description:
  PFAM: transposase IS66, Transposase IS66, predicted helix-turn-helix domain, Transposase TnpC, homeodomain; KEGG: transposase.


ensembl_gene_id: PMI07_001438
symbol: EUB96539.1
gene_biotype: protein_coding
description:
  PFAM: Capsule polysaccharide biosynthesis protein, Glycosyl transferase, family 29; KEGG: capsule polysaccharide biosynthesis protein.


ensembl_gene_id: PMI07_001443
symbol: EUB96544.1
gene_biotype: protein_coding
description:
  TIGRFAM: penicillin-binding protein, 1A family; KEGG: cell division (penicillin-binding family) protein; PFAM: glycosyl transferase family 51, penicillin-binding protein transpeptidase, BA14K family protein.


ensembl_gene_id: PMI07_001446
symbol: EUB96547.1
gene_biotype: protein_coding
description:
  PFAM: Xylose isomerase domain-containing protein TIM barrel; KEGG: xylose isomerase domain-containing protein.


ensembl_gene_id: PMI07_001448
symbol: EUB96549.1
gene_biotype: protein_coding
description:
  PFAM: extracellular solute-binding protein family 1; KEGG: family 1 extracellular solute-binding protein.


ensembl_gene_id: PMI07_001451
symbol: EUB96552.1
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate-transporting ATPase; PFAM: ABC transporter related protein, Transport-associated OB domain-containing protein; KEGG: ABC transporter-like protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.


ensembl_gene_id: PMI07_001452
symbol: EUB96553.1
gene_biotype: protein_coding
description:
  Transcriptional regulator, LysR family; PFAM: LysR substrate-binding protein, regulatory protein LysR; KEGG: LysR family regulatory protein; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: PMI07_001457
symbol: EUB96558.1
gene_biotype: protein_coding
description:
  PFAM: ABC-type transporter, integral membrane subunit, Oligopeptide transport permease C-like, N-terminal domain; KEGG: binding-protein-dependent transporter inner membrane component family protein 68.


ensembl_gene_id: PMI07_001458
symbol: EUB96559.1
gene_biotype: protein_coding
description:
  SMART: AAA ATPase; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: transport system ATP-binding protein; PFAM: Oligopeptide/dipeptide ABC transporter domain protein, ABC transporter related protein; Belongs to the ABC transporter superfamily.


ensembl_gene_id: PMI07_001459
symbol: EUB96560.1
gene_biotype: protein_coding
description:
  SMART: AAA ATPase; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: oligopeptide transport ATP-binding protein AppF 5; PFAM: ABC transporter related protein, Oligopeptide/dipeptide ABC transporter domain protein; Belongs to the ABC transporter superfamily.


ensembl_gene_id: PMI07_001462
symbol: EUB96563.1
gene_biotype: protein_coding
description:
  KEGG: phosphonate ABC transporter inner membrane subunit; TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: ABC-type transporter, integral membrane subunit.


ensembl_gene_id: PMI07_001464
symbol: EUB96565.1
gene_biotype: protein_coding
description:
  TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate binding protein, phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: phnD, ABC transporter, phosphonate, periplasmic substrate-binding protein phnD.


ensembl_gene_id: PMI07_001465
symbol: phnC
gene_biotype: protein_coding
description:
  Phosphonate ABC transporter, ATPase subunit; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.


ensembl_gene_id: PMI07_001467
symbol: EUB96568.1
gene_biotype: protein_coding
description:
  ABC transporter related protein; KEGG: phnL, phosphonate C-P lyase system protein PhnL; PFAM: ABC transporter related protein; SMART: AAA ATPase.


ensembl_gene_id: PMI07_001468
symbol: EUB96569.1
gene_biotype: protein_coding
description:
  Fe(3+)-transporting ATPase; PFAM: ABC transporter related protein, Oligopeptide/dipeptide ABC transporter domain protein; KEGG: ABC transporter-like protein; SMART: AAA ATPase.


ensembl_gene_id: PMI07_001469
symbol: EUB96570.1
gene_biotype: protein_coding
description:
  Phosphonate metabolism PhnJ; Catalyzes the breakage of the C-P bond in alpha-D-ribose 1- methylphosphonate 5-phosphate (PRPn) forming alpha-D-ribose. Belongs to the PhnJ family.


ensembl_gene_id: PMI07_001471
symbol: EUB96572.1
gene_biotype: protein_coding
description:
  KEGG: phosphonate C-P lyase system protein PhnH; TIGRFAM: phosphonate C-P lyase system protein PhnH; PFAM: phosphonate metabolism.


ensembl_gene_id: PMI07_001473
symbol: EUB96574.1
gene_biotype: protein_coding
description:
  TIGRFAM: phosphonates metabolism transcriptional regulator PhnF; PFAM: UbiC transcription regulator-associated domain-containing protein, regulatory protein GntR HTH; KEGG: phnF, phosphonates metabolism transcriptional regulator PhnF; SMART: UbiC transcription regulator-associated domain-containing protein, regulatory protein GntR HTH.


ensembl_gene_id: PMI07_001478
symbol: minC
gene_biotype: protein_coding
description:
  Septum site-determining protein minC; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family.


ensembl_gene_id: PMI07_001479
symbol: EUB96580.1
gene_biotype: protein_coding
description:
  KEGG: minD, cell division inhibitor MinD protein; TIGRFAM: septum site-determining protein MinD; PFAM: Cobyrinic acid ac-diamide synthase.


ensembl_gene_id: PMI07_001480
symbol: minE
gene_biotype: protein_coding
description:
  Cell division topological specificity factor; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell.


ensembl_gene_id: PMI07_001484
symbol: EUB96585.1
gene_biotype: protein_coding
description:
  TIGRFAM: hydrolase CocE/NonD family protein; PFAM: X-Pro dipeptidyl-peptidase domain protein; KEGG: peptidase S15; SMART: X-Pro dipeptidyl-peptidase domain protein.


ensembl_gene_id: PMI07_001485
symbol: EUB96586.1
gene_biotype: protein_coding
description:
  Polyamine-transporting ATPase; PFAM: ABC transporter related protein, Transport-associated OB domain-containing protein; KEGG: ABC transporter nucleotide binding/ATPase protein; SMART: AAA ATPase.


ensembl_gene_id: PMI07_001493
symbol: EUB96594.1
gene_biotype: protein_coding
description:
  PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein, response regulator receiver, PAS fold-3 domain protein, histidine kinase A domain protein; KEGG: two component sensor kinase/response regulator hybrid; SMART: ATP-binding region ATPase domain protein, response regulator receiver, PAC repeat-containing protein, PAS domain containing protein, histidine kinase A domain protein.


ensembl_gene_id: PMI07_001494
symbol: EUB96595.1
gene_biotype: protein_coding
description:
  PFAM: Circadian clock protein KaiC central region; KEGG: non-specific serine/threonine protein kinase; SMART: AAA ATPase.


ensembl_gene_id: PMI07_001499
symbol: nadA
gene_biotype: protein_coding
description:
  Quinolinate synthase A; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.


ensembl_gene_id: PMI07_001501
symbol: EUB96602.1
gene_biotype: protein_coding
description:
  TIGRFAM: nicotinate-nucleotide pyrophosphorylase; KEGG: nadC, nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase, Quinolinate phosphoribosyl transferase domain-containing protein; Belongs to the NadC/ModD family.


ensembl_gene_id: PMI07_001502
symbol: EUB96603.1
gene_biotype: protein_coding
description:
  Beta-Ala-His dipeptidase; KEGG: hypothetical protein; PFAM: peptidase M20, peptidase dimerization domain protein.


ensembl_gene_id: PMI07_001503
symbol: ade-3
gene_biotype: protein_coding
description:
  HAMAP : Adenine deaminase; KEGG: adenine deaminase; PFAM: Adenine deaminase C-terminal domain; Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family.


ensembl_gene_id: PMI07_001504
symbol: EUB96605.1
gene_biotype: protein_coding
description:
  4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.


ensembl_gene_id: PMI07_001507
symbol: EUB96608.1
gene_biotype: protein_coding
description:
  PFAM: Enoyl-CoA hydratase/isomerase; KEGG: caiD, putative carnitinyl-CoA dehydratase; Belongs to the enoyl-CoA hydratase/isomerase family.


ensembl_gene_id: PMI07_001508
symbol: EUB96609.1
gene_biotype: protein_coding
description:
  KEGG: putative acyl-CoA transferase; PFAM: L-carnitine dehydratase/bile acid-inducible protein F; Belongs to the CoA-transferase III family.


ensembl_gene_id: PMI07_001511
symbol: EUB96612.1
gene_biotype: protein_coding
description:
  Taurine-transporting ATPase; PFAM: ABC transporter related protein; KEGG: putative ATP-binding component of ABC transporter; SMART: AAA ATPase.


ensembl_gene_id: PMI07_001513
symbol: EUB96614.1
gene_biotype: protein_coding
description:
  Helix-turn-helix domain protein; KEGG: transcriptional regulator Cro/CI family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein.


ensembl_gene_id: PMI07_001518
symbol: EUB96619.1
gene_biotype: protein_coding
description:
  PFAM: transcriptional activator domain-containing protein; KEGG: SARP family transcriptional regulator.


ensembl_gene_id: PMI07_001521
symbol: EUB96622.1
gene_biotype: protein_coding
description:
  Extracellular solute-binding protein family 1; Part of the ABC transporter complex MalEFGK involved in maltose/maltodextrin import. Binds maltose and higher maltodextrins. Belongs to the bacterial solute-binding protein 1 family.


ensembl_gene_id: PMI07_001522
symbol: EUB96623.1
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate-transporting ATPase; PFAM: ABC transporter related protein, Transport-associated OB domain-containing protein; KEGG: mtlK, sugar ABC transporter ATPases; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.


ensembl_gene_id: PMI07_001524
symbol: murQ
gene_biotype: protein_coding
description:
  N-acetylmuramic acid 6-phosphate etherase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate. Together with AnmK, is also required for the utilization of anhydro-N-acetylmuramic acid (anhMurNAc) either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling.


ensembl_gene_id: PMI07_001526
symbol: EUB96627.1
gene_biotype: protein_coding
description:
  Monosaccharide-transporting ATPase; PFAM: ABC transporter related protein; KEGG: frcA, fructose ABC transporter; SMART: AAA ATPase.


ensembl_gene_id: PMI07_001527
symbol: EUB96628.1
gene_biotype: protein_coding
description:
  PFAM: ABC-type transporter, integral membrane subunit; KEGG: frcC, fructose ABC transporter; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: PMI07_001528
symbol: EUB96629.1
gene_biotype: protein_coding
description:
  PFAM: Periplasmic binding protein domain; KEGG: periplasmic binding protein/LacI transcriptional regulator.


ensembl_gene_id: PMI07_001531
symbol: EUB96632.1
gene_biotype: protein_coding
description:
  KEGG: dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; Belongs to the IlvD/Edd family.


ensembl_gene_id: PMI07_001532
symbol: EUB96633.1
gene_biotype: protein_coding
description:
  KEGG: GntR family transcriptional regulator; PFAM: GntR domain protein, regulatory protein GntR HTH; SMART: GntR domain protein, regulatory protein GntR HTH.


ensembl_gene_id: PMI07_001533
symbol: EUB96634.1
gene_biotype: protein_coding
description:
  PFAM: dihydrodipicolinate synthetase; KEGG: dihydrodipicolinate synthetase; Belongs to the DapA family.


ensembl_gene_id: PMI07_001535
symbol: EUB96636.1
gene_biotype: protein_coding
description:
  PFAM: SMP-30/Gluconolaconase/LRE-like region-containing protein; KEGG: SMP-30/gluconolaconase/LRE domain-containing protein.


ensembl_gene_id: PMI07_001538
symbol: EUB96639.1
gene_biotype: protein_coding
description:
  PFAM: ABC-type glycine betaine transport, periplasmic subunit; KEGG: glycine betaine ABC transporter substrate-binding protein.


ensembl_gene_id: PMI07_001539
symbol: EUB96640.1
gene_biotype: protein_coding
description:
  PFAM: ABC-type transporter, integral membrane subunit; KEGG: yehY, osmoprotectant uptake system permease protein YehY.


ensembl_gene_id: PMI07_001540
symbol: EUB96641.1
gene_biotype: protein_coding
description:
  Fe(3+)-transporting ATPase; PFAM: ABC transporter related protein; KEGG: yehX, osmoprotectant uptake system ATP-binding protein YehX; SMART: AAA ATPase.


ensembl_gene_id: PMI07_001541
symbol: EUB96642.1
gene_biotype: protein_coding
description:
  PFAM: ABC-type transporter, integral membrane subunit; KEGG: choline uptake ABC transporter permease.


ensembl_gene_id: PMI07_001543
symbol: anmK
gene_biotype: protein_coding
description:
  Anhydro-N-acetylmuramic acid kinase; Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the anhydro-N-acetylmuramic acid kinase family.


ensembl_gene_id: PMI07_001545
symbol: EUB96646.1
gene_biotype: protein_coding
description:
  Phosphonate-transporting ATPase, Nickel-transporting ATPase; PFAM: ABC transporter related protein, Oligopeptide/dipeptide ABC transporter domain protein; KEGG: peptide ABC transporter; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.


ensembl_gene_id: PMI07_001551
symbol: murA
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.


ensembl_gene_id: PMI07_001552
symbol: EUB96653.1
gene_biotype: protein_coding
description:
  Transcriptional regulator, RpiR family; PFAM: sugar isomerase (SIS), helix-turn-helix protein RpiR; KEGG: SIS domain-containing protein.


ensembl_gene_id: PMI07_001557
symbol: EUB96658.1
gene_biotype: protein_coding
description:
  Chloromuconate cycloisomerase; PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: mandelate racemase/muconate lactonizing protein; SMART: Mandelate racemase/muconate lactonizing protein.


ensembl_gene_id: PMI07_001558
symbol: EUB96659.1
gene_biotype: protein_coding
description:
  KEGG: transcriptional regulator, IclR family; PFAM: SMP-30/Gluconolaconase/LRE-like region-containing protein, Transcriptional regulator IclR, regulatory protein IclR; SMART: regulatory protein IclR.


ensembl_gene_id: PMI07_001559
symbol: EUB96660.1
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate-transporting ATPase; PFAM: ABC transporter related protein, Transport-associated OB domain-containing protein; KEGG: lacK1, Lactose transport ATP-binding protein LacK; SMART: AAA ATPase.


ensembl_gene_id: PMI07_001560
symbol: EUB96661.1
gene_biotype: protein_coding
description:
  PFAM: short-chain dehydrogenase/reductase SDR; KEGG: oxidoreductase; SMART: Polyketide synthase/Fatty acid synthase, KR.


ensembl_gene_id: PMI07_001562
symbol: EUB96663.1
gene_biotype: protein_coding
description:
  PFAM: ABC-type transporter, integral membrane subunit; KEGG: permease component of ABC-type sugar transporter.


ensembl_gene_id: PMI07_001565
symbol: EUB96666.1
gene_biotype: protein_coding
description:
  Galactonate dehydratase; PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: Mandelate racemase/muconate lactonizing protein; SMART: Mandelate racemase/muconate lactonizing protein.


ensembl_gene_id: PMI07_001566
symbol: msrA
gene_biotype: protein_coding
description:
  Peptide methionine sulfoxide reductase msrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.


ensembl_gene_id: PMI07_001567
symbol: EUB96668.1
gene_biotype: protein_coding
description:
  PFAM: Aldehyde Dehydrogenase; KEGG: aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: PMI07_001568
symbol: EUB96669.1
gene_biotype: protein_coding
description:
  KEGG: ABC transporter permease; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit.


ensembl_gene_id: PMI07_001569
symbol: EUB96670.1
gene_biotype: protein_coding
description:
  PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: ABC transporter permease.


ensembl_gene_id: PMI07_001570
symbol: EUB96671.1
gene_biotype: protein_coding
description:
  TRAP dicarboxylate transporter, DctP subunit; KEGG: putative periplasmic C4-dicarboxylate transport protein; TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: Extracellular solute-binding protein, family 7.


ensembl_gene_id: PMI07_001572
symbol: EUB96673.1
gene_biotype: protein_coding
description:
  L-rhamnonate dehydratase; PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: L-alanine-DL-glutamate epimerase; SMART: Mandelate racemase/muconate lactonizing protein.


ensembl_gene_id: PMI07_001573
symbol: EUB96674.1
gene_biotype: protein_coding
description:
  PFAM: dihydrodipicolinate synthetase; TIGRFAM: 5-dehydro-4-deoxyglucarate dehydratase; HAMAP : 5-dehydro-4-deoxyglucarate dehydratase; KEGG: 5-dehydro-4-deoxyglucarate dehydratase; Belongs to the DapA family.


ensembl_gene_id: PMI07_001574
symbol: EUB96675.1
gene_biotype: protein_coding
description:
  GntR domain protein; KEGG: GntR family transcriptional regulator; PFAM: GntR domain protein, regulatory protein GntR HTH; SMART: regulatory protein GntR HTH, GntR domain protein.


ensembl_gene_id: PMI07_001576
symbol: EUB96677.1
gene_biotype: protein_coding
description:
  PDZ/DHR/GLGF domain protein; KEGG: peptidase S1 and S6 chymotrypsin/Hap; PFAM: PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein.


ensembl_gene_id: PMI07_001577
symbol: EUB96678.1
gene_biotype: protein_coding
description:
  PFAM: Tyrosine/serine-protein phosphatase IphP-type, Tyrosine-protein phosphatase family, C-terminal domain; KEGG: protein tyrosine/serine phosphatase.


ensembl_gene_id: PMI07_001578
symbol: EUB96679.1
gene_biotype: protein_coding
description:
  PFAM: ABC-type transporter, integral membrane subunit; KEGG: putative sugar ABC transporter permease.


ensembl_gene_id: PMI07_001579
symbol: EUB96680.1
gene_biotype: protein_coding
description:
  PFAM: ABC-type transporter, integral membrane subunit; KEGG: SN-glycerol-3-phosphate transport system permease protein UgpA.


ensembl_gene_id: PMI07_001587
symbol: EUB96377.1
gene_biotype: protein_coding
description:
  Transcriptional regulator, LysR family; PFAM: LysR substrate-binding protein, regulatory protein LysR; KEGG: transcriptional regulator, LysR family.


ensembl_gene_id: PMI07_001589
symbol: EUB96379.1
gene_biotype: protein_coding
description:
  Monosaccharide-transporting ATPase; PFAM: ABC transporter related protein, Oligopeptide/dipeptide ABC transporter domain protein; KEGG: ABC transporter; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.


ensembl_gene_id: PMI07_001590
symbol: EUB96380.1
gene_biotype: protein_coding
description:
  PFAM: ABC-type transporter, integral membrane subunit, Oligopeptide transport permease C-like, N-terminal domain; KEGG: binding-protein-dependent transport systems inner membrane component.


ensembl_gene_id: PMI07_001593
symbol: EUB96383.1
gene_biotype: protein_coding
description:
  KEGG: marR, transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR.


ensembl_gene_id: PMI07_001596
symbol: EUB96386.1
gene_biotype: protein_coding
description:
  TIGRFAM: 4-hydroxyphenylpyruvate dioxygenase; KEGG: hpd, 4-hydroxyphenylpyruvate dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase.


ensembl_gene_id: PMI07_001597
symbol: EUB96387.1
gene_biotype: protein_coding
description:
  KEGG: azlB, transcriptional regulator AzlB; PFAM: Transcription regulator, AsnC-type; SMART: Transcription regulator, AsnC-type.


ensembl_gene_id: PMI07_001598
symbol: EUB96388.1
gene_biotype: protein_coding
description:
  PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway).


ensembl_gene_id: PMI07_001599
symbol: EUB96389.1
gene_biotype: protein_coding
description:
  TIGRFAM: maleylacetoacetate isomerase; KEGG: maleylacetoacetate isomerase protein; PFAM: Glutathione S-transferase domain-containing protein.


ensembl_gene_id: PMI07_001601
symbol: EUB96391.1
gene_biotype: protein_coding
description:
  PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: TRAP transporter small permease protein.


ensembl_gene_id: PMI07_001602
symbol: EUB96392.1
gene_biotype: protein_coding
description:
  TRAP dicarboxylate transporter, DctM subunit; KEGG: yian3, 2,3-diketo-L-gulonate TRAP transporter large permease protein yiaN; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit.


ensembl_gene_id: PMI07_001603
symbol: EUB96393.1
gene_biotype: protein_coding
description:
  TRAP dicarboxylate transporter, DctP subunit; KEGG: C4-dicarboxylate transport system, substrate-binding protein; TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: Extracellular solute-binding protein, family 7.


ensembl_gene_id: PMI07_001604
symbol: EUB96394.1
gene_biotype: protein_coding
description:
  PFAM: Shikimate dehydrogenase substrate binding domain protein, Shikimate/quinate 5-dehydrogenase; KEGG: aroEc, shikimate 5-dehydrogenase; Belongs to the shikimate dehydrogenase family.


ensembl_gene_id: PMI07_001608
symbol: EUB96398.1
gene_biotype: protein_coding
description:
  Nickel-transporting ATPase, Fe(3+)-transporting ATPase; PFAM: ABC transporter related protein, Oligopeptide/dipeptide ABC transporter domain protein; KEGG: ABC transporter nucleotide binding/ATPase protein (Peptide); SMART: AAA ATPase; Belongs to the ABC transporter superfamily.


ensembl_gene_id: PMI07_001610
symbol: EUB96400.1
gene_biotype: protein_coding
description:
  PFAM: ABC-type transporter, periplasmic subunit; KEGG: accA, Extracellular solute-binding protein family 5.


ensembl_gene_id: PMI07_001615
symbol: EUB96405.1
gene_biotype: protein_coding
description:
  Glutamate carboxypeptidase; KEGG: hippurate hydrolase; PFAM: peptidase M20, peptidase dimerization domain protein.


ensembl_gene_id: PMI07_001618
symbol: EUB96408.1
gene_biotype: protein_coding
description:
  PFAM: ABC-type transporter, integral membrane subunit; KEGG: ribose ABC transporter membrane spanning protein; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: PMI07_001619
symbol: EUB96409.1
gene_biotype: protein_coding
description:
  Monosaccharide-transporting ATPase; PFAM: ABC transporter related protein; KEGG: ribose ABC transporter nucleotide binding protein/ATPase; SMART: AAA ATPase.


ensembl_gene_id: PMI07_001624
symbol: EUB96414.1
gene_biotype: protein_coding
description:
  PFAM: Periplasmic binding protein domain; KEGG: sugar ABC transporter periplasmic sugar-binding protein.


ensembl_gene_id: PMI07_001625
symbol: EUB96415.1
gene_biotype: protein_coding
description:
  Monosaccharide-transporting ATPase; PFAM: ABC transporter related protein; KEGG: ABC transporter-like protein; SMART: AAA ATPase.


ensembl_gene_id: PMI07_001627
symbol: EUB96417.1
gene_biotype: protein_coding
description:
  Xenobiotic-transporting ATPase; PFAM: ABC transporter transmembrane region, ABC transporter related protein; KEGG: putative ATP-binding component of ABC transporter; SMART: AAA ATPase.


ensembl_gene_id: PMI07_001628
symbol: EUB96418.1
gene_biotype: protein_coding
description:
  Xenobiotic-transporting ATPase; PFAM: ABC transporter transmembrane region, ABC transporter related protein; KEGG: ABC transporter ATP-binding protein; SMART: AAA ATPase.


ensembl_gene_id: PMI07_001629
symbol: EUB96419.1
gene_biotype: protein_coding
description:
  PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: glyoxalase/bleomycin resistance protein/dioxygenase.


ensembl_gene_id: PMI07_001631
symbol: EUB96421.1
gene_biotype: protein_coding
description:
  Nickel-transporting ATPase; PFAM: ABC transporter related protein; KEGG: ABC transporter; SMART: AAA ATPase; overlaps another CDS with the same product name.


ensembl_gene_id: PMI07_001634
symbol: EUB96424.1
gene_biotype: protein_coding
description:
  PFAM: ABC-type transporter, integral membrane subunit; KEGG: putative transmembrane component of ABC transporter.


ensembl_gene_id: PMI07_001635
symbol: EUB96425.1
gene_biotype: protein_coding
description:
  PFAM: ABC-type transporter, periplasmic subunit; KEGG: family 5 extracellular solute-binding protein.


ensembl_gene_id: PMI07_001637
symbol: EUB96427.1
gene_biotype: protein_coding
description:
  3-oxoacyl-(acyl-carrier-protein) synthase 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.


ensembl_gene_id: PMI07_001638
symbol: EUB96428.1
gene_biotype: protein_coding
description:
  TIGRFAM: acetyl-CoA acetyltransferase; KEGG: acetyl-CoA acetyltransferase; PFAM: Thiolase domain-containing protein; Belongs to the thiolase-like superfamily. Thiolase family.


ensembl_gene_id: PMI07_001644
symbol: EUB96327.1
gene_biotype: protein_coding
description:
  Transcriptional regulator, LysR family; PFAM: regulatory protein LysR, LysR substrate-binding protein; KEGG: putative LysR family transcriptional regulator.


ensembl_gene_id: PMI07_001647
symbol: EUB96330.1
gene_biotype: protein_coding
description:
  Polyamine-transporting ATPase; PFAM: ABC transporter related protein, Transport-associated OB domain-containing protein; KEGG: fbpC, Fe3+ ABC transporter ATPase FbpC/AfuC; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.


ensembl_gene_id: PMI07_001648
symbol: EUB96331.1
gene_biotype: protein_coding
description:
  KEGG: GntR family transcriptional regulator; PFAM: regulatory protein GntR HTH, GntR domain protein; SMART: GntR domain protein, regulatory protein GntR HTH.


ensembl_gene_id: PMI07_001649
symbol: EUB96332.1
gene_biotype: protein_coding
description:
  PFAM: glycine cleavage T protein (aminomethyl transferase); KEGG: gcvT, glycine cleavage system T protein, aminomethyltransferase; Belongs to the GcvT family.


ensembl_gene_id: PMI07_001652
symbol: EUB96335.1
gene_biotype: protein_coding
description:
  PFAM: Extracellular solute-binding protein, family 7; KEGG: TRAP dicarboxylate transporter subunit DctP.


ensembl_gene_id: PMI07_001653
symbol: EUB96336.1
gene_biotype: protein_coding
description:
  PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: TRAP C4-dicarboxylate transporter subunit DctQ.


ensembl_gene_id: PMI07_001654
symbol: EUB96337.1
gene_biotype: protein_coding
description:
  KEGG: TRAP C4-dicarboxylate transporter permease DctM; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit.


ensembl_gene_id: PMI07_001655
symbol: EUB96338.1
gene_biotype: protein_coding
description:
  PFAM: Uncharacterized protein family UPF0311; KEGG: hypothetical protein; Belongs to the UPF0311 family.


ensembl_gene_id: PMI07_001656
symbol: EUB96339.1
gene_biotype: protein_coding
description:
  Benzoylformate decarboxylase, Betaine-aldehyde dehydrogenase; KEGG: NAD-dependent aldehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase, thiamine pyrophosphate TPP-binding domain-containing protein, thiamine pyrophosphate central domain-containing protein; Belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: PMI07_001659
symbol: EUB96342.1
gene_biotype: protein_coding
description:
  Estradiol 17-beta-dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; KEGG: putative short-chain dehydrogenase/reductase SDR; SMART: Polyketide synthase/Fatty acid synthase, KR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: PMI07_001660
symbol: EUB96343.1
gene_biotype: protein_coding
description:
  DJ-1 domain, InhA-type; KEGG: glxA5, HTH-type transcriptional regulator GlxA; PFAM: DJ-1 domain, InhA-type, Helix-turn-helix, AraC domain-containing protein; SMART: Helix-turn-helix, AraC domain-containing protein.


ensembl_gene_id: PMI07_001664
symbol: EUB96347.1
gene_biotype: protein_coding
description:
  Monosaccharide-transporting ATPase; PFAM: ABC transporter related protein; KEGG: ABC transporter protein; SMART: AAA ATPase.


ensembl_gene_id: PMI07_001666
symbol: amiF
gene_biotype: protein_coding
description:
  Formamidase; Is an aliphatic amidase with a restricted substrate specificity, as it only hydrolyzes formamide; Belongs to the carbon-nitrogen hydrolase superfamily. Aliphatic amidase family.


ensembl_gene_id: PMI07_001667
symbol: EUB96350.1
gene_biotype: protein_coding
description:
  PFAM: ABC-type transporter, integral membrane subunit; KEGG: inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: PMI07_001670
symbol: EUB96353.1
gene_biotype: protein_coding
description:
  KEGG: GntR family transcriptional regulator; PFAM: GntR domain protein, regulatory protein GntR HTH; SMART: regulatory protein GntR HTH, GntR domain protein.


ensembl_gene_id: PMI07_001671
symbol: EUB96354.1
gene_biotype: protein_coding
description:
  Microcystin LR degradation protein MlrC; Involved in peptidolytic degradation of cyclic heptapeptide hepatotoxin microcystin (MC); Belongs to the peptidase M81 family.


ensembl_gene_id: PMI07_001675
symbol: EUB96358.1
gene_biotype: protein_coding
description:
  PFAM: ABC-type transporter, integral membrane subunit, Oligopeptide transport permease C-like, N-terminal domain; KEGG: binding-protein-dependent transport system inner membrane protein.


ensembl_gene_id: PMI07_001678
symbol: EUB96361.1
gene_biotype: protein_coding
description:
  KEGG: GntR family transcriptional regulator; PFAM: regulatory protein GntR HTH, GntR domain protein; SMART: regulatory protein GntR HTH, GntR domain protein.


ensembl_gene_id: PMI07_001679
symbol: EUB96362.1
gene_biotype: protein_coding
description:
  Transcriptional regulator, Crp/Fnr family; KEGG: cAMP-binding protein; PFAM: cyclic nucleotide-binding protein; SMART: regulatory protein Crp, cyclic nucleotide-binding protein.


ensembl_gene_id: PMI07_001681
symbol: EUB96364.1
gene_biotype: protein_coding
description:
  Two component transcriptional regulator, LuxR family; KEGG: fixJ1, FixJ response regulator; PFAM: response regulator receiver, regulatory protein LuxR; SMART: response regulator receiver, regulatory protein LuxR.


ensembl_gene_id: PMI07_001682
symbol: EUB96365.1
gene_biotype: protein_coding
description:
  Multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein, PAS fold domain protein, histidine kinase A domain protein; KEGG: fixL, sensor protein FixL; SMART: ATP-binding region ATPase domain protein, PAS domain containing protein, histidine kinase A domain protein.


ensembl_gene_id: PMI07_001684
symbol: EUB96367.1
gene_biotype: protein_coding
description:
  UbiD family decarboxylase; KEGG: carboxylyase-like protein; TIGRFAM: UbiD family decarboxylase; PFAM: Carboxylyase-related protein; Belongs to the UbiD family.


ensembl_gene_id: PMI07_001685
symbol: EUB96368.1
gene_biotype: protein_coding
description:
  Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); TIGRFAM: diguanylate cyclase, PAS sensor protein; PFAM: EAL domain-containing protein, GGDEF domain containing protein; KEGG: PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase; SMART: EAL domain-containing protein, PAC repeat-containing protein, GGDEF domain containing protein, PAS domain containing protein, GAF domain protein.


ensembl_gene_id: PMI07_001686
symbol: EUB96369.1
gene_biotype: protein_coding
description:
  PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein, response regulator receiver, histidine kinase A domain protein, PAS fold-4 domain protein, PAS fold-3 domain protein; KEGG: sensor protein; SMART: ATP-binding region ATPase domain protein, response regulator receiver, PAC repeat-containing protein, PAS domain containing protein, histidine kinase A domain protein.


ensembl_gene_id: PMI07_001689
symbol: EUB96087.1
gene_biotype: protein_coding
description:
  SMART: Methionine synthase B12-binding module cap domain protein; TIGRFAM: methionine synthase; KEGG: metH, B12-dependent methionine synthase; PFAM: homocysteine S-methyltransferase, dihydropteroate synthase DHPS, Methionine synthase B12-binding module cap domain protein, cobalamin B12-binding domain protein, Vitamin B12 dependent methionine synthase activation region.


ensembl_gene_id: PMI07_001694
symbol: EUB96092.1
gene_biotype: protein_coding
description:
  Transcriptional regulator, RpiR family; PFAM: sugar isomerase (SIS), helix-turn-helix protein RpiR; KEGG: RpiR family transcriptional regulator.


ensembl_gene_id: PMI07_001697
symbol: EUB96095.1
gene_biotype: protein_coding
description:
  Glutamate--ammonia ligase; KEGG: glutamine synthetase protein; PFAM: glutamine synthetase catalytic region.


ensembl_gene_id: PMI07_001706
symbol: EUB96104.1
gene_biotype: protein_coding
description:
  KEGG: hypothetical protein; TIGRFAM: Beta-lactamase hydrolase-family protein; PFAM: Beta-lactamase hydrolase-family protein.


ensembl_gene_id: PMI07_001708
symbol: EUB96106.1
gene_biotype: protein_coding
description:
  KEGG: ilvG, acetolactate synthase large subunit; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein, thiamine pyrophosphate central domain-containing protein; Belongs to the TPP enzyme family.


ensembl_gene_id: PMI07_001709
symbol: EUB96107.1
gene_biotype: protein_coding
description:
  Formyl-CoA transferase; KEGG: caiB, L-carnitine dehydratase; PFAM: L-carnitine dehydratase/bile acid-inducible protein F; Belongs to the CoA-transferase III family.


ensembl_gene_id: PMI07_001712
symbol: EUB96110.1
gene_biotype: protein_coding
description:
  TIGRFAM: ATP-binding cassette protein, ChvD family; PFAM: ABC transporter related protein; KEGG: ABC transporter ATP-binding protein; SMART: AAA ATPase.


ensembl_gene_id: PMI07_001713
symbol: EUB96111.1
gene_biotype: protein_coding
description:
  KEGG: mcpC, methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer, Nitrate and nitrite sensing domain protein, histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer, histidine kinase HAMP region domain protein.


ensembl_gene_id: PMI07_001714
symbol: EUB96112.1
gene_biotype: protein_coding
description:
  KEGG: transcriptional regulator, ArsR family; PFAM: Methyltransferase type 11, regulatory protein ArsR; SMART: regulatory protein ArsR.


ensembl_gene_id: PMI07_001715
symbol: EUB96113.1
gene_biotype: protein_coding
description:
  TIGRFAM: 5,10-methylenetetrahydrofolate reductase; KEGG: metF, 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.


ensembl_gene_id: PMI07_001718
symbol: EUB96116.1
gene_biotype: protein_coding
description:
  KEGG: glycoside hydrolase; PFAM: glycoside hydrolase family 25; SMART: Glycoside hydrolase, family 25 subgroup.


ensembl_gene_id: PMI07_001719
symbol: EUB96117.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: btaB, S-adenosylmethionine:diacylgycerolhomoserine-N- methyltransferase.


ensembl_gene_id: PMI07_001724
symbol: pfp
gene_biotype: protein_coding
description:
  Phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP- PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions.


ensembl_gene_id: PMI07_001725
symbol: EUB96123.1
gene_biotype: protein_coding
description:
  Tellurite resistance TerB; KEGG: djlA, DnaJ family molecular chaperone; PFAM: Tellurite resistance TerB, heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein.


ensembl_gene_id: PMI07_001726
symbol: EUB96124.1
gene_biotype: protein_coding
description:
  KEGG: N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD; PFAM: N-acetylmuramoyl-L-alanine amidase family 2, Peptidoglycan-binding domain 1 protein; SMART: N-acetylmuramoyl-L-alanine amidase family 2.


ensembl_gene_id: PMI07_001729
symbol: mraZ
gene_biotype: protein_coding
description:
  Protein mraZ; KEGG: cell division protein MraZ; HAMAP : Protein mraZ; PFAM: MraZ domain-containing protein; Belongs to the MraZ family.


ensembl_gene_id: PMI07_001730
symbol: rsmH
gene_biotype: protein_coding
description:
  Ribosomal RNA small subunit methyltransferase H; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.


ensembl_gene_id: PMI07_001732
symbol: EUB96130.1
gene_biotype: protein_coding
description:
  Peptidoglycan glycosyltransferase; KEGG: pbpB1, penicillin binding protein 2; PFAM: penicillin-binding protein transpeptidase, Penicillin-binding protein dimerization domain-containing protein.


ensembl_gene_id: PMI07_001733
symbol: murE
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily.


ensembl_gene_id: PMI07_001734
symbol: murF
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.


ensembl_gene_id: PMI07_001735
symbol: mraY
gene_biotype: protein_coding
description:
  Phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.


ensembl_gene_id: PMI07_001736
symbol: murD
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.


ensembl_gene_id: PMI07_001737
symbol: EUB96135.1
gene_biotype: protein_coding
description:
  KEGG: ftsW, cell division protein; TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein; Belongs to the SEDS family.


ensembl_gene_id: PMI07_001738
symbol: murG
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.


ensembl_gene_id: PMI07_001741
symbol: aqpZ
gene_biotype: protein_coding
description:
  Aquaporin Z; Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity; Belongs to the MIP/aquaporin (TC 1.A.8) family.


ensembl_gene_id: PMI07_001742
symbol: ddl
gene_biotype: protein_coding
description:
  D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.


ensembl_gene_id: PMI07_001743
symbol: ftsQ
gene_biotype: protein_coding
description:
  Cell division protein FtsQ; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily.


ensembl_gene_id: PMI07_001744
symbol: ftsA
gene_biotype: protein_coding
description:
  Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.


ensembl_gene_id: PMI07_001745
symbol: ftsZ
gene_biotype: protein_coding
description:
  Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.


ensembl_gene_id: PMI07_001746
symbol: lpxC
gene_biotype: protein_coding
description:
  UDP-3-O-(3-hydroxymyristoyl) N-acetylglucosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the LpxC family.


ensembl_gene_id: PMI07_001747
symbol: bamD
gene_biotype: protein_coding
description:
  Outer membrane assembly lipoprotein YfiO; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.


ensembl_gene_id: PMI07_001749
symbol: ligA
gene_biotype: protein_coding
description:
  DNA ligase; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA; Belongs to the NAD-dependent DNA ligase family. LigA subfamily.


ensembl_gene_id: PMI07_001752
symbol: EUB96150.1
gene_biotype: protein_coding
description:
  Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; KEGG: putative transcription regulator containing HTH domain.


ensembl_gene_id: PMI07_001753
symbol: EUB96151.1
gene_biotype: protein_coding
description:
  KEGG: exonuclease RNase T and DNA polymerase III; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease.


ensembl_gene_id: PMI07_001755
symbol: EUB96153.1
gene_biotype: protein_coding
description:
  PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: FAD-binding dehydrogenase.


ensembl_gene_id: PMI07_001758
symbol: EUB96156.1
gene_biotype: protein_coding
description:
  KEGG: mcpW, methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer, histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer, histidine kinase HAMP region domain protein.


ensembl_gene_id: PMI07_001761
symbol: prmA
gene_biotype: protein_coding
description:
  Ribosomal protein L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family.


ensembl_gene_id: PMI07_001770
symbol: EUB96168.1
gene_biotype: protein_coding
description:
  TIGRFAM: amidohydrolase; KEGG: amidohydrolase; PFAM: peptidase M20, peptidase dimerization domain protein.


ensembl_gene_id: PMI07_001773
symbol: EUB96171.1
gene_biotype: protein_coding
description:
  PFAM: UvrD-like DNA helicase, Helicase superfamily 1 UvrD-related protein; KEGG: pcrA, DNA helicase II.


ensembl_gene_id: PMI07_001776
symbol: EUB96174.1
gene_biotype: protein_coding
description:
  PFAM: Phosphogluconate dehydrogenase, NAD-binding protein, NADP oxidoreductase coenzyme F420-dependent; KEGG: 6-phosphogluconatedehydrogenase.


ensembl_gene_id: PMI07_001778
symbol: EUB96176.1
gene_biotype: protein_coding
description:
  D-lactate dehydrogenase (cytochrome); KEGG: glcD, glycolate oxidase subunit GlcD; PFAM: FAD linked oxidase domain protein, FAD linked oxidase domain-containing protein.


ensembl_gene_id: PMI07_001786
symbol: thyA
gene_biotype: protein_coding
description:
  Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis.


ensembl_gene_id: PMI07_001787
symbol: EUB96185.1
gene_biotype: protein_coding
description:
  Dihydrofolate reductase region; Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis.


ensembl_gene_id: PMI07_001790
symbol: EUB96188.1
gene_biotype: protein_coding
description:
  TIGRFAM: protease Do; PFAM: PDZ/DHR/GLGF domain protein; KEGG: htrA family protein; SMART: PDZ/DHR/GLGF domain protein; Belongs to the peptidase S1C family.


ensembl_gene_id: PMI07_001794
symbol: EUB96192.1
gene_biotype: protein_coding
description:
  KEGG: serB, phosphoserine phosphatase; TIGRFAM: phosphoserine phosphatase SerB, HAD-superfamily hydrolase, subfamily IB (PSPase-like).


ensembl_gene_id: PMI07_001795
symbol: miaA
gene_biotype: protein_coding
description:
  tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.


ensembl_gene_id: PMI07_001797
symbol: EUB96195.1
gene_biotype: protein_coding
description:
  TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; KEGG: ilvI, acetolactate synthase III, large subunit; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein, thiamine pyrophosphate central domain-containing protein.


ensembl_gene_id: PMI07_001798
symbol: EUB96196.1
gene_biotype: protein_coding
description:
  KEGG: ilvH, acetolactate synthase 3 regulatory subunit; TIGRFAM: acetolactate synthase, small subunit; PFAM: Acetolactate synthase, small subunit.


ensembl_gene_id: PMI07_001799
symbol: EUB96197.1
gene_biotype: protein_coding
description:
  PFAM: Capsule polysaccharide biosynthesis protein; KEGG: capsule polysaccharide biosynthesis protein.


ensembl_gene_id: PMI07_001803
symbol: EUB96201.1
gene_biotype: protein_coding
description:
  TIGRFAM: nitrile hydratase, alpha subunit; KEGG: nitrile hydratase subunit alpha; PFAM: Nitrile hydratase alpha chain.


ensembl_gene_id: PMI07_001804
symbol: EUB96202.1
gene_biotype: protein_coding
description:
  Nitrile hydratase beta subunit; NHase catalyzes the hydration of various nitrile compounds to the corresponding amides; Belongs to the nitrile hydratase subunit beta family.


ensembl_gene_id: PMI07_001807
symbol: EUB96205.1
gene_biotype: protein_coding
description:
  KEGG: ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2, sigma-70 region 2 domain protein.


ensembl_gene_id: PMI07_001813
symbol: pdxJ
gene_biotype: protein_coding
description:
  Pyridoxine 5'-phosphate synthase; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate.


ensembl_gene_id: PMI07_001814
symbol: EUB96212.1
gene_biotype: protein_coding
description:
  Transcriptional regulator, MarR family with acetyltransferase activity; KEGG: transcriptional regulator; PFAM: GCN5-related N-acetyltransferase; SMART: regulatory protein MarR.


ensembl_gene_id: PMI07_001817
symbol: EUB96215.1
gene_biotype: protein_coding
description:
  Transcriptional regulator, HxlR family; PFAM: helix-turn-helix HxlR type; KEGG: hypothetical protein.


ensembl_gene_id: PMI07_001820
symbol: EUB96218.1
gene_biotype: protein_coding
description:
  KEGG: AraC family transcriptional regulator; PFAM: AraC-type transcriptional regulator domain protein, Helix-turn-helix, AraC domain-containing protein; SMART: Helix-turn-helix, AraC domain-containing protein.


ensembl_gene_id: PMI07_001823
symbol: ilvC
gene_biotype: protein_coding
description:
  Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate.


ensembl_gene_id: PMI07_001825
symbol: EUB96223.1
gene_biotype: protein_coding
description:
  TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain-containing protein; KEGG: AbrC family transcriptional regulator; SMART: SpoVT/AbrB domain-containing protein.


ensembl_gene_id: PMI07_001826
symbol: EUB96224.1
gene_biotype: protein_coding
description:
  Putative transcriptional regulator, GntR family; PFAM: aminotransferase class I and II; KEGG: aminotransferase.


ensembl_gene_id: PMI07_001829
symbol: EUB96227.1
gene_biotype: protein_coding
description:
  PFAM: ABC-type transporter, integral membrane subunit; KEGG: afuB, Ferric transport system permease.


ensembl_gene_id: PMI07_001830
symbol: EUB96228.1
gene_biotype: protein_coding
description:
  Polyamine-transporting ATPase; PFAM: ABC transporter related protein, Transport-associated OB domain-containing protein; KEGG: ABC transporter nucleotide-binding protein/ATPase; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.


ensembl_gene_id: PMI07_001834
symbol: EUB96232.1
gene_biotype: protein_coding
description:
  KEGG: phenazine antibiotic biosynthesis related protein; TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein.


ensembl_gene_id: PMI07_001842
symbol: EUB96240.1
gene_biotype: protein_coding
description:
  Efflux transporter, RND family, MFP subunit; KEGG: mexE1, HlyD family multidrug-efflux system secretion protein; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: PMI07_001843
symbol: EUB96241.1
gene_biotype: protein_coding
description:
  KEGG: hydrophobe/amphiphile efflux-1 (HAE1) family transporter; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein.


ensembl_gene_id: PMI07_001845
symbol: EUB96243.1
gene_biotype: protein_coding
description:
  TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; KEGG: HAD-superfamily hydrolase subfamily IA, variant 1 and 3.


ensembl_gene_id: PMI07_001850
symbol: secD
gene_biotype: protein_coding
description:
  SecF protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.


ensembl_gene_id: PMI07_001853
symbol: EUB96251.1
gene_biotype: protein_coding
description:
  KEGG: hypothetical protein; TIGRFAM: integral membrane protein, YjbE family; PFAM: Integral membrane protein TerC.


ensembl_gene_id: PMI07_001854
symbol: EUB96252.1
gene_biotype: protein_coding
description:
  KEGG: response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver.


ensembl_gene_id: PMI07_001858
symbol: EUB96256.1
gene_biotype: protein_coding
description:
  KEGG: hypothetical protein; HAMAP : UPF0303 protein; PFAM: protein of unknown function DUF336; Belongs to the UPF0303 family.


ensembl_gene_id: PMI07_001862
symbol: EUB96260.1
gene_biotype: protein_coding
description:
  KEGG: dimethylglycine dehydrogenase; PFAM: FAD dependent oxidoreductase, glycine cleavage T protein (aminomethyl transferase), Glycine cleavage T-protein barrel; Belongs to the GcvT family.


ensembl_gene_id: PMI07_001864
symbol: EUB96262.1
gene_biotype: protein_coding
description:
  TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: two component response regulator; SMART: GGDEF domain containing protein.


ensembl_gene_id: PMI07_001865
symbol: EUB96263.1
gene_biotype: protein_coding
description:
  DJ-1 domain, InhA-type; KEGG: transcriptional regulator, AraC family; PFAM: DJ-1 domain, InhA-type, Helix-turn-helix, AraC domain-containing protein; SMART: Helix-turn-helix, AraC domain-containing protein.


ensembl_gene_id: PMI07_001874
symbol: EUB96272.1
gene_biotype: protein_coding
description:
  Methionine synthase; PFAM: cobalamin B12-binding domain protein, Methionine synthase B12-binding module cap domain protein; KEGG: dimethylamine corrinoid protein; SMART: Methionine synthase B12-binding module cap domain protein.


ensembl_gene_id: PMI07_001875
symbol: EUB96273.1
gene_biotype: protein_coding
description:
  PFAM: trimethylamine methyltransferase; KEGG: trimethylamine methyltransferase; Belongs to the trimethylamine methyltransferase family.


ensembl_gene_id: PMI07_001878
symbol: EUB96276.1
gene_biotype: protein_coding
description:
  KEGG: von Willebrand factor type A; PFAM: Protein of unknown function DUF3520, Uncharacterized protein family YfbK; SMART: von Willebrand factor type A.


ensembl_gene_id: PMI07_001881
symbol: EUB96279.1
gene_biotype: protein_coding
description:
  PFAM: ABC-type glycine betaine transport, periplasmic subunit; KEGG: QAT familiy ABC transporter, periplasmic substrate-binding protein.


ensembl_gene_id: PMI07_001882
symbol: EUB96280.1
gene_biotype: protein_coding
description:
  Adenosylcobinamide-phosphate guanylyltransferase; Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate.


ensembl_gene_id: PMI07_001884
symbol: EUB96282.1
gene_biotype: protein_coding
description:
  PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: iunH, inosine-uridine preferring nucleoside hydrolase.


ensembl_gene_id: PMI07_001886
symbol: EUB96284.1
gene_biotype: protein_coding
description:
  PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; KEGG: (3R)-hydroxymyristoyl-ACP dehydratase.


ensembl_gene_id: PMI07_001887
symbol: EUB96285.1
gene_biotype: protein_coding
description:
  PFAM: Beta-ketoacyl synthase; KEGG: 3-oxoacyl-(acyl carrier protein) synthase II; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.


ensembl_gene_id: PMI07_001888
symbol: EUB96286.1
gene_biotype: protein_coding
description:
  Beta-ketoacyl-acyl-carrier-protein synthase II; PFAM: Beta-ketoacyl synthase; KEGG: fabF, 3-oxoacyl-ACP synthase; SMART: Polyketide synthase, beta-ketoacyl synthase region-containing protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.


ensembl_gene_id: PMI07_001889
symbol: EUB96287.1
gene_biotype: protein_coding
description:
  NADPH:quinone reductase; PFAM: Alcohol dehydrogenase zinc-binding domain protein, Alcohol dehydrogenase GroES domain protein; KEGG: alcohol dehydrogenase zinc-binding domain-containing protein; SMART: Polyketide synthase, enoylreductase.


ensembl_gene_id: PMI07_001895
symbol: EUB96293.1
gene_biotype: protein_coding
description:
  6-phosphogluconate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.


ensembl_gene_id: PMI07_001900
symbol: EUB96298.1
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate-transporting ATPase; PFAM: ABC transporter related protein, Transport-associated OB domain-containing protein; KEGG: ABC transporter permease; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.


ensembl_gene_id: PMI07_001901
symbol: EUB96299.1
gene_biotype: protein_coding
description:
  KEGG: beta-mannosidase; PFAM: glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich.


ensembl_gene_id: PMI07_001905
symbol: EUB96303.1
gene_biotype: protein_coding
description:
  Xylan 1,4-beta-xylosidase; KEGG: xynA, beta-xylosidase; PFAM: glycoside hydrolase family 43; Belongs to the glycosyl hydrolase 43 family.


ensembl_gene_id: PMI07_001907
symbol: EUB96305.1
gene_biotype: protein_coding
description:
  PFAM: ABC-type metal ion transporter, periplasmic subunit; KEGG: znuA, ABC transporter, substrate binding protein (zinc).


ensembl_gene_id: PMI07_001908
symbol: znuC
gene_biotype: protein_coding
description:
  ABC transporter related protein; Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Zinc importer (TC 3.A.1.15.5) family.


ensembl_gene_id: PMI07_001910
symbol: EUB96308.1
gene_biotype: protein_coding
description:
  Ferric uptake regulator, Fur family; PFAM: ferric-uptake regulator; KEGG: zinc uptake transcriptional regulator protein; Belongs to the Fur family.


ensembl_gene_id: PMI07_001913
symbol: EUB96311.1
gene_biotype: protein_coding
description:
  PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein, histidine kinase A domain protein, response regulator receiver, PAS fold-3 domain protein; KEGG: sensor histidine kinase; SMART: ATP-binding region ATPase domain protein, response regulator receiver, histidine kinase A domain protein, PAS domain containing protein.


ensembl_gene_id: PMI07_001917
symbol: EUB96315.1
gene_biotype: protein_coding
description:
  Na/Pi-cotransporter II-related protein; KEGG: sodium-dependent phosphate transporter; TIGRFAM: Na/Pi-cotransporter II-related protein; PFAM: Na+/Picotransporter.


ensembl_gene_id: PMI07_001927
symbol: EUB96325.1
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF112 transmembrane; KEGG: tricarboxylate transport membrane protein TctA.


ensembl_gene_id: PMI07_001935
symbol: EUB95447.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like.


ensembl_gene_id: PMI07_001936
symbol: EUB95448.1
gene_biotype: protein_coding
description:
  KEGG: ilvB2, acetolactate synthase large subunit, biosynthetic type 2; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein, thiamine pyrophosphate central domain-containing protein.


ensembl_gene_id: PMI07_001939
symbol: EUB95451.1
gene_biotype: protein_coding
description:
  Acetolactate synthase; KEGG: thiamine pyrophosphate domain-containing TPP-binding protein; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein.


ensembl_gene_id: PMI07_001940
symbol: EUB95452.1
gene_biotype: protein_coding
description:
  Taurine-transporting ATPase; PFAM: ABC transporter related protein; KEGG: ABC transporter; SMART: AAA ATPase.


ensembl_gene_id: PMI07_001941
symbol: EUB95453.1
gene_biotype: protein_coding
description:
  PFAM: ABC-type transporter, integral membrane subunit; KEGG: putative amino acid ABC transporter, permease protein.


ensembl_gene_id: PMI07_001951
symbol: EUB95463.1
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF112 transmembrane; KEGG: tctA6, tricarboxylate transport protein TctA.


ensembl_gene_id: PMI07_001952
symbol: EUB95464.1
gene_biotype: protein_coding
description:
  Acetolactate synthase; KEGG: hypothetical protein; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein, thiamine pyrophosphate central domain-containing protein; Belongs to the TPP enzyme family.


ensembl_gene_id: PMI07_001963
symbol: dusA
gene_biotype: protein_coding
description:
  TIM-barrel protein, yjbN family; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs; Belongs to the Dus family. DusA subfamily.


ensembl_gene_id: PMI07_001965
symbol: EUB95477.1
gene_biotype: protein_coding
description:
  PFAM: flagellar basal body rod protein, protein of unknown function DUF1078 domain protein; KEGG: hypothetical protein.


ensembl_gene_id: PMI07_001966
symbol: gcvP
gene_biotype: protein_coding
description:
  Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.


ensembl_gene_id: PMI07_001967
symbol: gcvH
gene_biotype: protein_coding
description:
  Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.


ensembl_gene_id: PMI07_001968
symbol: EUB95480.1
gene_biotype: protein_coding
description:
  TIGRFAM: glycine cleavage system T protein; KEGG: gcvT, glycine cleavage system protein T2; PFAM: glycine cleavage T protein (aminomethyl transferase), Glycine cleavage T-protein barrel.


ensembl_gene_id: PMI07_001971
symbol: EUB95483.1
gene_biotype: protein_coding
description:
  Diguanylate phosphodiesterase with integral membrane sensor; KEGG: putative transmembrane EAL domain-containing protein; PFAM: EAL domain-containing protein, Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain; SMART: EAL domain-containing protein.


ensembl_gene_id: PMI07_001973
symbol: crcB
gene_biotype: protein_coding
description:
  CrcB-like protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.


ensembl_gene_id: PMI07_001982
symbol: EUB95494.1
gene_biotype: protein_coding
description:
  UPF0178 protein yaiI; KEGG: hypothetical protein; HAMAP : UPF0178 protein yaiI; PFAM: protein of unknown function DUF188; Belongs to the UPF0178 family.


ensembl_gene_id: PMI07_001983
symbol: EUB95495.1
gene_biotype: protein_coding
description:
  Addiction module antidote protein, CC2985 family; KEGG: putative transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain; TIGRFAM: addiction module antidote protein, CC2985 family; PFAM: Uncharacterized protein family UPF0156/MetJ /Arc repressor.


ensembl_gene_id: PMI07_001985
symbol: EUB95497.1
gene_biotype: protein_coding
description:
  KEGG: glutathione-dependent formaldehyde dehydrogenase; TIGRFAM: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; PFAM: Alcohol dehydrogenase GroES domain protein, Alcohol dehydrogenase zinc-binding domain protein; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.


ensembl_gene_id: PMI07_001990
symbol: lipB
gene_biotype: protein_coding
description:
  Octanoyltransferase; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate.


ensembl_gene_id: PMI07_001995
symbol: def
gene_biotype: protein_coding
description:
  Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. Belongs to the polypeptide deformylase family.


ensembl_gene_id: PMI07_002001
symbol: EUB95513.1
gene_biotype: protein_coding
description:
  TIGRFAM: L-serine dehydratase 1; KEGG: sdaA, L-serine ammonia-lyase; PFAM: serine dehydratase alpha chain, serine dehydratase beta chain; Belongs to the iron-sulfur dependent L-serine dehydratase family.


ensembl_gene_id: PMI07_002004
symbol: EUB95516.1
gene_biotype: protein_coding
description:
  Serine-type D-Ala-D-Ala carboxypeptidase; KEGG: dac, penicillin-binding protein; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1, Sporulation domain-containing protein; Belongs to the peptidase S11 family.


ensembl_gene_id: PMI07_002010
symbol: EUB95522.1
gene_biotype: protein_coding
description:
  KEGG: inosine-5`-monophosphate dehydrogenase; PFAM: CBS domain containing protein; SMART: CBS domain containing protein.


ensembl_gene_id: PMI07_002012
symbol: hisI
gene_biotype: protein_coding
description:
  Phosphoribosyl-AMP cyclohydrolase; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP.


ensembl_gene_id: PMI07_002013
symbol: folE
gene_biotype: protein_coding
description:
  PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase; TIGRFAM: GTP cyclohydrolase I; HAMAP : GTP cyclohydrolase 1; KEGG: folE, GTP cyclohydrolase I.


ensembl_gene_id: PMI07_002015
symbol: EUB95527.1
gene_biotype: protein_coding
description:
  UPF0161 protein yidD; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.


ensembl_gene_id: PMI07_002017
symbol: thrS
gene_biotype: protein_coding
description:
  Threonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr).


ensembl_gene_id: PMI07_002020
symbol: EUB95532.1
gene_biotype: protein_coding
description:
  KEGG: hypothetical protein; PFAM: flavin reductase domain protein FMN-binding protein; SMART: flavin reductase domain protein FMN-binding protein.


ensembl_gene_id: PMI07_002021
symbol: EUB95533.1
gene_biotype: protein_coding
description:
  PFAM: HpcH/HpaI aldolase; KEGG: citrate lyase beta subunit; Belongs to the HpcH/HpaI aldolase family.


ensembl_gene_id: PMI07_002026
symbol: EUB95538.1
gene_biotype: protein_coding
description:
  Putative PAS/PAC sensor protein; KEGG: bacteriophytochrome protein; PFAM: Phytochrome central region domain protein, GAF domain protein, HWE histidine kinase, response regulator receiver, PAS fold-2 domain protein; SMART: HWE histidine kinase, response regulator receiver, GAF domain protein.


ensembl_gene_id: PMI07_002027
symbol: parE
gene_biotype: protein_coding
description:
  DNA topoisomerase IV, B subunit; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 1 subfamily.


ensembl_gene_id: PMI07_002029
symbol: tpiA
gene_biotype: protein_coding
description:
  Triosephosphate isomerase, bacterial/eukaryotic; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.


ensembl_gene_id: PMI07_002030
symbol: EUB95542.1
gene_biotype: protein_coding
description:
  Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.


ensembl_gene_id: PMI07_002031
symbol: pyrG
gene_biotype: protein_coding
description:
  CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.


ensembl_gene_id: PMI07_002032
symbol: EUB95544.1
gene_biotype: protein_coding
description:
  Gluconate 5-dehydrogenase; KEGG: short-chain dehydrogenase/reductase SDR; SMART: Polyketide synthase/Fatty acid synthase, KR.


ensembl_gene_id: PMI07_002036
symbol: EUB95548.1
gene_biotype: protein_coding
description:
  Deoxyribodipyrimidine photo-lyase; KEGG: DNA photolyase; PFAM: DNA photolyase FAD-binding protein, DNA photolyase domain protein.


ensembl_gene_id: PMI07_002037
symbol: EUB95549.1
gene_biotype: protein_coding
description:
  MoeA domain protein domain I and II; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.


ensembl_gene_id: PMI07_002038
symbol: moaC
gene_biotype: protein_coding
description:
  Molybdenum cofactor biosynthesis C, bacterial-type; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family.


ensembl_gene_id: PMI07_002039
symbol: trpC
gene_biotype: protein_coding
description:
  HAMAP : Indole-3-glycerol phosphate synthase; KEGG: trpC, Indole-3-glycerol phosphate synthase; PFAM: Indole-3-glycerol phosphate synthase; Belongs to the TrpC family.


ensembl_gene_id: PMI07_002040
symbol: trpD
gene_biotype: protein_coding
description:
  Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).


ensembl_gene_id: PMI07_002041
symbol: EUB95553.1
gene_biotype: protein_coding
description:
  PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: ppiD1, peptidyl prolyl cis-trans isomerase D signal peptide protein.


ensembl_gene_id: PMI07_002047
symbol: metG
gene_biotype: protein_coding
description:
  Methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 2B subfamily.


ensembl_gene_id: PMI07_002049
symbol: tmk
gene_biotype: protein_coding
description:
  Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.


ensembl_gene_id: PMI07_002050
symbol: EUB95562.1
gene_biotype: protein_coding
description:
  Serine-type D-Ala-D-Ala carboxypeptidase; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1, Penicillin-binding protein 5 domain protein; KEGG: serine-type D-Ala-D-Ala carboxypeptidase; SMART: Penicillin-binding protein 5 domain protein; Belongs to the peptidase S11 family.


ensembl_gene_id: PMI07_002051
symbol: rlpA
gene_biotype: protein_coding
description:
  Rare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.


ensembl_gene_id: PMI07_002053
symbol: EUB95565.1
gene_biotype: protein_coding
description:
  KEGG: Crp/Fnr family transcriptional regulator; PFAM: cyclic nucleotide-binding protein; SMART: regulatory protein Crp.


ensembl_gene_id: PMI07_002081
symbol: EUB95593.1
gene_biotype: protein_coding
description:
  PFAM: integrase family protein; KEGG: bacteriophage integrase; Belongs to the 'phage' integrase family.


ensembl_gene_id: PMI07_002088
symbol: tgt
gene_biotype: protein_coding
description:
  Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form t [...]


ensembl_gene_id: PMI07_002089
symbol: queA
gene_biotype: protein_coding
description:
  S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).


ensembl_gene_id: PMI07_002090
symbol: EUB95602.1
gene_biotype: protein_coding
description:
  Peptidyl-prolyl cis-trans isomerase cyclophilin type; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.


ensembl_gene_id: PMI07_002092
symbol: coaD
gene_biotype: protein_coding
description:
  Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.


ensembl_gene_id: PMI07_002095
symbol: gyrA
gene_biotype: protein_coding
description:
  DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: PMI07_002096
symbol: EUB95608.1
gene_biotype: protein_coding
description:
  KEGG: multiple antibiotic resistance protein; TIGRFAM: multiple antibiotic resistance (MarC)-related protein; PFAM: multiple antibiotic resistance (MarC)-related protein.


ensembl_gene_id: PMI07_002097
symbol: EUB95609.1
gene_biotype: protein_coding
description:
  KEGG: hypothetical protein; PFAM: HPP family protein, CBS domain containing protein; SMART: CBS domain containing protein.


ensembl_gene_id: PMI07_002098
symbol: EUB95610.1
gene_biotype: protein_coding
description:
  Single-strand binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.


ensembl_gene_id: PMI07_002099
symbol: uvrA
gene_biotype: protein_coding
description:
  UvrABC system protein A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.


ensembl_gene_id: PMI07_002101
symbol: nnrE
gene_biotype: protein_coding
description:
  ADP/ATP-dependent (S)-NAD(P)H-hydrate dehydratase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration.  Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to [...]


ensembl_gene_id: PMI07_002102
symbol: EUB95614.1
gene_biotype: protein_coding
description:
  KEGG: glnB, Nitrogen regulatory protein PII; PFAM: nitrogen regulatory protein P-II; SMART: nitrogen regulatory protein P-II; Belongs to the P(II) protein family.


ensembl_gene_id: PMI07_002103
symbol: EUB95615.1
gene_biotype: protein_coding
description:
  KEGG: glutamine synthetase, type I; TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region, glutamine synthetase beta-Grasp.


ensembl_gene_id: PMI07_002105
symbol: EUB95617.1
gene_biotype: protein_coding
description:
  TIGRFAM: hemimethylated DNA binding protein; PFAM: Hemimethylated DNA-binding region; KEGG: hypothetical protein; SMART: Hemimethylated DNA-binding region.


ensembl_gene_id: PMI07_002107
symbol: EUB95619.1
gene_biotype: protein_coding
description:
  PFAM: ABC-type transporter, periplasmic subunit; KEGG: peptide ABC transporter substrate-binding protein.


ensembl_gene_id: PMI07_002110
symbol: mfd
gene_biotype: protein_coding
description:
  Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.


ensembl_gene_id: PMI07_002112
symbol: recG
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.


ensembl_gene_id: PMI07_002114
symbol: glmS
gene_biotype: protein_coding
description:
  Glucosamine--fructose-6-phosphate aminotransferase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.


ensembl_gene_id: PMI07_002115
symbol: glmU
gene_biotype: protein_coding
description:
  Bifunctional protein glmU; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain.


ensembl_gene_id: PMI07_002117
symbol: EUB95629.1
gene_biotype: protein_coding
description:
  PFAM: ABC-type transporter, integral membrane subunit; KEGG: sugar ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: PMI07_002119
symbol: EUB95631.1
gene_biotype: protein_coding
description:
  Monosaccharide-transporting ATPase; PFAM: ABC transporter related protein; KEGG: ABC transporter, nucleotide binding/ATPase protein (sugar); SMART: AAA ATPase.


ensembl_gene_id: PMI07_002120
symbol: EUB95632.1
gene_biotype: protein_coding
description:
  Phosphatidylcholine synthase; Condenses choline with CDP-diglyceride to produce phosphatidylcholine and CMP; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: PMI07_002121
symbol: EUB95633.1
gene_biotype: protein_coding
description:
  KEGG: ubiF, 2-octaprenyl-6-methoxyphenyl hydroxylase; TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase FAD-binding protein.


ensembl_gene_id: PMI07_002123
symbol: EUB95635.1
gene_biotype: protein_coding
description:
  PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: cytochrome C biogenesis protein transmembrane region.


ensembl_gene_id: PMI07_002124
symbol: EUB95636.1
gene_biotype: protein_coding
description:
  SMART: PDZ/DHR/GLGF domain protein; TIGRFAM: protease Do; KEGG: HtrA protease/chaperone protein; PFAM: PDZ/DHR/GLGF domain protein; Belongs to the peptidase S1C family.


ensembl_gene_id: PMI07_002132
symbol: EUB95644.1
gene_biotype: protein_coding
description:
  Phosphonate-transporting ATPase; PFAM: ABC transporter related protein; KEGG: ABC transporter, nucleotide binding/ATPase protein; SMART: AAA ATPase.


ensembl_gene_id: PMI07_002133
symbol: EUB95645.1
gene_biotype: protein_coding
description:
  PFAM: MacB-like periplasmic core domain, protein of unknown function DUF214; KEGG: hypothetical protein.


ensembl_gene_id: PMI07_002135
symbol: EUB95647.1
gene_biotype: protein_coding
description:
  FeS assembly scaffold SufA; KEGG: iron-sulfur cluster insertion protein; TIGRFAM: FeS assembly scaffold SufA, iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; Belongs to the HesB/IscA family.


ensembl_gene_id: PMI07_002136
symbol: EUB95648.1
gene_biotype: protein_coding
description:
  KEGG: hypothetical protein; TIGRFAM: FeS assembly SUF system protein; PFAM: protein of unknown function DUF59.


ensembl_gene_id: PMI07_002137
symbol: EUB95649.1
gene_biotype: protein_coding
description:
  TIGRFAM: cysteine desulfurase, SufS subfamily; KEGG: cysteine desulfurase; PFAM: aminotransferase class V; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: PMI07_002138
symbol: EUB95650.1
gene_biotype: protein_coding
description:
  KEGG: sufD, iron-sulfur cluster assembly protein; TIGRFAM: FeS assembly protein SufD; PFAM: SufBD protein.


ensembl_gene_id: PMI07_002139
symbol: EUB95651.1
gene_biotype: protein_coding
description:
  TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter related protein; KEGG: sufC, ABC transporter ATPase; SMART: AAA ATPase.


ensembl_gene_id: PMI07_002143
symbol: EUB95655.1
gene_biotype: protein_coding
description:
  TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: ydaM2, hypothetical protein; SMART: GGDEF domain containing protein.


ensembl_gene_id: PMI07_002144
symbol: tyrS
gene_biotype: protein_coding
description:
  Tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily.


ensembl_gene_id: PMI07_002146
symbol: EUB95658.1
gene_biotype: protein_coding
description:
  PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen.


ensembl_gene_id: PMI07_002149
symbol: EUB95661.1
gene_biotype: protein_coding
description:
  KEGG: rhlE, ATP-dependent RNA helicase RhlE; PFAM: DEAD/DEAH box helicase domain protein, helicase domain-containing protein; SMART: DEAD-like helicase, helicase domain-containing protein; Belongs to the DEAD box helicase family.


ensembl_gene_id: PMI07_002151
symbol: EUB95663.1
gene_biotype: protein_coding
description:
  PFAM: TfoX domain-containing protein; KEGG: regulator of competence-specific genes protein, TfoX family.


ensembl_gene_id: PMI07_002156
symbol: EUB95668.1
gene_biotype: protein_coding
description:
  KEGG: oligopeptide ABC transporter; PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase.


ensembl_gene_id: PMI07_002157
symbol: EUB95669.1
gene_biotype: protein_coding
description:
  KEGG: 4-hydroxyphenylacetate 3-monooxygenase small chain protein; PFAM: flavin reductase domain protein FMN-binding protein; SMART: flavin reductase domain protein FMN-binding protein.


ensembl_gene_id: PMI07_002159
symbol: EUB95671.1
gene_biotype: protein_coding
description:
  TIGRFAM: ribulose-phosphate 3-epimerase; KEGG: rpe, ribulose-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.


ensembl_gene_id: PMI07_002161
symbol: EUB95673.1
gene_biotype: protein_coding
description:
  TIGRFAM: adenylosuccinate lyase; PFAM: Lyase 1, N-terminal, Adenylosuccinate lyase; KEGG: purB, adenylosuccinate lyase; SMART: Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.


ensembl_gene_id: PMI07_002163
symbol: EUB95675.1
gene_biotype: protein_coding
description:
  Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: diguanylate cyclase, PAS sensor protein; PFAM: EAL domain-containing protein, GGDEF domain containing protein, PAS fold-3 domain protein; KEGG: diguanylate cyclase; SMART: EAL domain-containing protein, GGDEF domain containing protein, PAC repeat-containing protein, PAS domain containing protein.


ensembl_gene_id: PMI07_002165
symbol: purC
gene_biotype: protein_coding
description:
  PFAM: SAICAR synthetase; TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase; HAMAP : Phosphoribosylaminoimidazole-succinocarboxamide synthase; KEGG: purC1, phosphoribosylaminoimidazole-succinocarboxamide synthase.


ensembl_gene_id: PMI07_002166
symbol: purS
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase, purS; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to assi [...]


ensembl_gene_id: PMI07_002169
symbol: purQ
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase 1; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to assist i [...]


ensembl_gene_id: PMI07_002172
symbol: purL
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase 2; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to assist i [...]


ensembl_gene_id: PMI07_002176
symbol: EUB95688.1
gene_biotype: protein_coding
description:
  KEGG: grlA, glutaredoxin protein; TIGRFAM: glutaredoxin-like protein; PFAM: glutaredoxin; Belongs to the glutaredoxin family. Monothiol subfamily.


ensembl_gene_id: PMI07_002177
symbol: EUB95689.1
gene_biotype: protein_coding
description:
  KEGG: bicyclomycin resistance protein; TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1.


ensembl_gene_id: PMI07_002179
symbol: ttcA
gene_biotype: protein_coding
description:
  tRNA 2-thiocytidine biosynthesis protein TtcA; Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine/cysteine desulfurase (IscS) system.


ensembl_gene_id: PMI07_002180
symbol: alaS
gene_biotype: protein_coding
description:
  Alanine-tRNA ligase, eukaryota/bacteria; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.


ensembl_gene_id: PMI07_002181
symbol: recA
gene_biotype: protein_coding
description:
  Protein recA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.


ensembl_gene_id: PMI07_002182
symbol: EUB95694.1
gene_biotype: protein_coding
description:
  Multi-sensor hybrid histidine kinase; KEGG: blue-light-activated protein; PFAM: ATP-binding region ATPase domain protein, histidine kinase A domain protein, PAS domain containing protein, response regulator receiver; SMART: ATP-binding region ATPase domain protein, response regulator receiver, PAS domain containing protein, histidine kinase A domain protein.


ensembl_gene_id: PMI07_002184
symbol: dksA
gene_biotype: protein_coding
description:
  Transcriptional regulator, TraR/DksA family; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters.


ensembl_gene_id: PMI07_002185
symbol: EUB95697.1
gene_biotype: protein_coding
description:
  KEGG: phosphohistidine phosphatase, SixA; PFAM: Phosphoglycerate mutase; SMART: Phosphoglycerate mutase.


ensembl_gene_id: PMI07_002187
symbol: EUB95699.1
gene_biotype: protein_coding
description:
  UPF0283 membrane protein ycjF; TIGRFAM: Conserved hypothetical protein CHP01620; HAMAP : UPF0283 membrane protein ycjF; KEGG: hypothetical protein; PFAM: Uncharacterized protein family UPF0283.


ensembl_gene_id: PMI07_002189
symbol: EUB95701.1
gene_biotype: protein_coding
description:
  TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; KEGG: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK.


ensembl_gene_id: PMI07_002190
symbol: EUB95702.1
gene_biotype: protein_coding
description:
  Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.


ensembl_gene_id: PMI07_002191
symbol: EUB95703.1
gene_biotype: protein_coding
description:
  TIGRFAM: dihydropteroate synthase; KEGG: folP, dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS.


ensembl_gene_id: PMI07_002199
symbol: EUB95711.1
gene_biotype: protein_coding
description:
  Sulfate-transporting ATPase; PFAM: ABC transporter related protein; KEGG: ABC transporter; SMART: AAA ATPase.


ensembl_gene_id: PMI07_002200
symbol: EUB95712.1
gene_biotype: protein_coding
description:
  KEGG: ABC transporter; TIGRFAM: protein of unknown function DUF140; PFAM: protein of unknown function DUF140.


ensembl_gene_id: PMI07_002203
symbol: EUB95715.1
gene_biotype: protein_coding
description:
  PFAM: Calcineurin-like phosphoesterase superfamily domain; KEGG: UDP-2,3-diacylglucosamine hydrolase.


ensembl_gene_id: PMI07_002204
symbol: EUB95716.1
gene_biotype: protein_coding
description:
  KEGG: maeB, NADP-dependent malic enzyme; PFAM: phosphate acetyl/butaryl transferase, malic protein NAD-binding protein, malic protein domain protein; SMART: malic protein NAD-binding protein.


ensembl_gene_id: PMI07_002208
symbol: nadE
gene_biotype: protein_coding
description:
  NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.


ensembl_gene_id: PMI07_002209
symbol: EUB95721.1
gene_biotype: protein_coding
description:
  PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: glutathione-dependent formaldehyde-activating GFA.


ensembl_gene_id: PMI07_002210
symbol: EUB95722.1
gene_biotype: protein_coding
description:
  TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: putative DAHP synthetase protein; PFAM: DAHP synthetase class II.


ensembl_gene_id: PMI07_002214
symbol: rpiA
gene_biotype: protein_coding
description:
  Ribose-5-phosphate isomerase A; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.


ensembl_gene_id: PMI07_002215
symbol: EUB95727.1
gene_biotype: protein_coding
description:
  Phosphoglycolate phosphatase; Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family.


ensembl_gene_id: PMI07_002216
symbol: EUB95728.1
gene_biotype: protein_coding
description:
  PFAM: ErfK/YbiS/YcfS/YnhG family protein, Peptidoglycan-binding domain 1 protein; KEGG: hypothetical protein.


ensembl_gene_id: PMI07_002217
symbol: fumC
gene_biotype: protein_coding
description:
  Fumarate hydratase class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.


ensembl_gene_id: PMI07_002219
symbol: EUB95731.1
gene_biotype: protein_coding
description:
  KEGG: hypothetical protein; TIGRFAM: Pyridoxamine 5-phosphate oxidase, FMN-dependent; PFAM: pyridoxamine 5-phosphate oxidase-related FMN-binding protein.


ensembl_gene_id: PMI07_002223
symbol: moaA
gene_biotype: protein_coding
description:
  Molybdenum cofactor biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.


ensembl_gene_id: PMI07_002224
symbol: EUB95736.1
gene_biotype: protein_coding
description:
  KEGG: mcpZf2, methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer, histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer, histidine kinase HAMP region domain protein.


ensembl_gene_id: PMI07_002227
symbol: mobA
gene_biotype: protein_coding
description:
  Molybdopterin-guanine dinucleotide biosynthesis protein A; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor; Belongs to the MobA family.


ensembl_gene_id: PMI07_002228
symbol: EUB95740.1
gene_biotype: protein_coding
description:
  TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein B; KEGG: molybdopterin-guanine dinucleotide biosynthesis protein MobB.


ensembl_gene_id: PMI07_002230
symbol: EUB95742.1
gene_biotype: protein_coding
description:
  KEGG: amino acid ABC transporter substrate-binding protein; PFAM: ABC-type transporter, periplasmic subunit family 3; SMART: ABC-type transporter, periplasmic subunit family 3, ionotropic glutamate receptor; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: PMI07_002231
symbol: EUB95743.1
gene_biotype: protein_coding
description:
  KEGG: ABC transporter, membrane spanning protein (amino acid); TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: ABC-type transporter, integral membrane subunit.


ensembl_gene_id: PMI07_002234
symbol: EUB95746.1
gene_biotype: protein_coding
description:
  KEGG: methyltransferase; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat-containing protein.


ensembl_gene_id: PMI07_002238
symbol: EUB95750.1
gene_biotype: protein_coding
description:
  2-hydroxy-3-oxopropionate reductase; KEGG: NAD-binding 6-phosphogluconate dehydrogenase; PFAM: 6-phosphogluconate dehydrogenase NAD-binding protein.


ensembl_gene_id: PMI07_002240
symbol: EUB95752.1
gene_biotype: protein_coding
description:
  KEGG: transcriptional regulator AsnC family; PFAM: Transcription regulator, AsnC-type; SMART: Transcription regulator, AsnC-type.


ensembl_gene_id: PMI07_002241
symbol: EUB95753.1
gene_biotype: protein_coding
description:
  KEGG: uracil-DNA glycosylase superfamily; PFAM: Uracil-DNA glycosylase superfamily; SMART: Uracil-DNA glycosylase superfamily.


ensembl_gene_id: PMI07_002242
symbol: EUB95754.1
gene_biotype: protein_coding
description:
  KEGG: exoI, succinoglycan biosynthesis protein; PFAM: nuclease (SNase domain-containing protein); SMART: nuclease (SNase domain-containing protein).


ensembl_gene_id: PMI07_002243
symbol: EUB95755.1
gene_biotype: protein_coding
description:
  Integral membrane sensor signal transduction histidine kinase; KEGG: two-component sensor histidine kinase transcriptional regulatory protein; PFAM: ATP-binding region ATPase domain protein, histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein, histidine kinase A domain protein.


ensembl_gene_id: PMI07_002245
symbol: EUB95757.1
gene_biotype: protein_coding
description:
  Diacylglycerol kinase; Recycling of diacylglycerol produced during the turnover of membrane phospholipid.


ensembl_gene_id: PMI07_002246
symbol: cobT
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB).


ensembl_gene_id: PMI07_002247
symbol: cobS
gene_biotype: protein_coding
description:
  Cobalamin synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.


ensembl_gene_id: PMI07_002250
symbol: EUB95762.1
gene_biotype: protein_coding
description:
  KEGG: transcriptional regulator, AraC family protein; PFAM: Helix-turn-helix, AraC domain-containing protein; SMART: Helix-turn-helix, AraC domain-containing protein.


ensembl_gene_id: PMI07_002251
symbol: EUB95763.1
gene_biotype: protein_coding
description:
  PFAM: major facilitator superfamily MFS_1; KEGG: putative major facilitator superfamily (MFS) drug efflux transporter.


ensembl_gene_id: PMI07_002253
symbol: EUB95765.1
gene_biotype: protein_coding
description:
  Sulfate-transporting ATPase; PFAM: ABC transporter related protein; KEGG: ABC transporter, nucleotide binding/ATPase protein; SMART: AAA ATPase.


ensembl_gene_id: PMI07_002260
symbol: EUB95772.1
gene_biotype: protein_coding
description:
  KEGG: mclA2, methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer, Cache domain protein, histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer, Cache domain protein, histidine kinase HAMP region domain protein.


ensembl_gene_id: PMI07_002265
symbol: EUB95777.1
gene_biotype: protein_coding
description:
  TIGRFAM: diguanylate cyclase; PFAM: EAL domain-containing protein, GGDEF domain containing protein; KEGG: GGDEF family protein; SMART: EAL domain-containing protein, GGDEF domain containing protein.


ensembl_gene_id: PMI07_002266
symbol: uvrB
gene_biotype: protein_coding
description:
  UvrABC system protein B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and [...]


ensembl_gene_id: PMI07_002270
symbol: EUB95782.1
gene_biotype: protein_coding
description:
  KEGG: mvrA, ferredoxin NADP+ reductase; PFAM: Oxidoreductase FAD-binding domain protein, oxidoreductase FAD/NAD(P)-binding domain protein.


ensembl_gene_id: PMI07_002272
symbol: EUB95784.1
gene_biotype: protein_coding
description:
  KEGG: sulfite reductase; PFAM: nitrite and sulfite reductase 4Fe-4S region, nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein.


ensembl_gene_id: PMI07_002276
symbol: EUB95788.1
gene_biotype: protein_coding
description:
  MazG family protein; KEGG: mazG, nucleoside triphosphate pyrophosphohydrolase; TIGRFAM: MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase.


ensembl_gene_id: PMI07_002278
symbol: hflX
gene_biotype: protein_coding
description:
  GTP-binding protein, HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.


ensembl_gene_id: PMI07_002279
symbol: hfq
gene_biotype: protein_coding
description:
  Protein hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family.


ensembl_gene_id: PMI07_002281
symbol: EUB95793.1
gene_biotype: protein_coding
description:
  PFAM: TrkA-N domain protein, TrkA-C domain protein; KEGG: trkA, potassium transporter peripheral membrane protein.


ensembl_gene_id: PMI07_002282
symbol: EUB95794.1
gene_biotype: protein_coding
description:
  Two component, sigma54 specific, transcriptional regulator, Fis family; KEGG: ntrX, two-component response regulator nitrogen regulation protein; PFAM: sigma-54 factor interaction domain-containing protein, helix-turn-helix Fis-type, response regulator receiver; SMART: response regulator receiver, AAA ATPase.


ensembl_gene_id: PMI07_002283
symbol: EUB95795.1
gene_biotype: protein_coding
description:
  Multi-sensor signal transduction histidine kinase; KEGG: ntrY, two component sensor kinase; PFAM: ATP-binding region ATPase domain protein, histidine kinase HAMP region domain protein, histidine kinase A domain protein, PAS fold domain protein; SMART: ATP-binding region ATPase domain protein, histidine kinase HAMP region domain protein, PAS domain containing protein, histidine kinase A domain protein.


ensembl_gene_id: PMI07_002284
symbol: ntrC
gene_biotype: protein_coding
description:
  Nitrogen metabolism transcriptional regulator, NtrC, Fis Family; Member of the two-component regulatory system NtrB/NtrC, which controls expression of the nitrogen-regulated (ntr) genes in response to nitrogen limitation. Phosphorylated NtrC binds directly to DNA and stimulates the formation of open promoter-sigma54-RNA polymerase complexes.


ensembl_gene_id: PMI07_002285
symbol: EUB95797.1
gene_biotype: protein_coding
description:
  Signal transduction histidine kinase, nitrogen specific, NtrB; KEGG: ntrB, nitrogen regulation protein NtrB; PFAM: ATP-binding region ATPase domain protein, histidine kinase A domain protein, PAS fold domain protein; SMART: ATP-binding region ATPase domain protein, histidine kinase A domain protein.


ensembl_gene_id: PMI07_002286
symbol: EUB95798.1
gene_biotype: protein_coding
description:
  TIM-barrel protein, nifR3 family; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.


ensembl_gene_id: PMI07_002287
symbol: ispDF
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D- erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C- methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF).


ensembl_gene_id: PMI07_002288
symbol: EUB95800.1
gene_biotype: protein_coding
description:
  CinA domain protein; KEGG: cinA, competence/damage-inducible protein CinA; TIGRFAM: CinA domain protein; PFAM: CinA domain protein; Belongs to the CinA family.


ensembl_gene_id: PMI07_002293
symbol: lipA
gene_biotype: protein_coding
description:
  Lipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.


ensembl_gene_id: PMI07_002295
symbol: EUB95807.1
gene_biotype: protein_coding
description:
  TIGRFAM: dihydrolipoamide dehydrogenase; KEGG: lpdA, dihydrolipoamide dehydrogenase; PFAM: pyridine nucleotide-disulfide oxidoreductase dimerization region, FAD-dependent pyridine nucleotide-disulfide oxidoreductase, Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain.


ensembl_gene_id: PMI07_002298
symbol: EUB95810.1
gene_biotype: protein_coding
description:
  Pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).


ensembl_gene_id: PMI07_002299
symbol: EUB95811.1
gene_biotype: protein_coding
description:
  Transketolase central region; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.


ensembl_gene_id: PMI07_002300
symbol: pdhA
gene_biotype: protein_coding
description:
  Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).


ensembl_gene_id: PMI07_002302
symbol: eno
gene_biotype: protein_coding
description:
  Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.


ensembl_gene_id: PMI07_002303
symbol: kdsA
gene_biotype: protein_coding
description:
  PFAM: DAHP synthetase I/KDSA; TIGRFAM: 2-dehydro-3-deoxyphosphooctonate aldolase; HAMAP : 2-dehydro-3-deoxyphosphooctonate aldolase; KEGG: kdsA, 2-dehydro-3-deoxyphosphooctonate aldolase.


ensembl_gene_id: PMI07_002305
symbol: lexA
gene_biotype: protein_coding
description:
  SOS-response transcriptional repressor, LexA; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair.


ensembl_gene_id: PMI07_002306
symbol: EUB95818.1
gene_biotype: protein_coding
description:
  KEGG: ComEC/Rec2-like protein; TIGRFAM: ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein, Domain of unknown function DUF4131.


ensembl_gene_id: PMI07_002307
symbol: EUB95819.1
gene_biotype: protein_coding
description:
  KEGG: gltA, type II citrate synthase; TIGRFAM: citrate synthase I; PFAM: Citrate synthase; Belongs to the citrate synthase family.


ensembl_gene_id: PMI07_002308
symbol: EUB95820.1
gene_biotype: protein_coding
description:
  lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: PMI07_002310
symbol: lpxA
gene_biotype: protein_coding
description:
  Acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: PMI07_002311
symbol: fabZ
gene_biotype: protein_coding
description:
  (3R)-hydroxymyristoyl-(acyl-carrier-protein) dehydratase; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.


ensembl_gene_id: PMI07_002312
symbol: lpxD
gene_biotype: protein_coding
description:
  UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily.


ensembl_gene_id: PMI07_002313
symbol: bamA
gene_biotype: protein_coding
description:
  Outer membrane protein assembly factor yaeT; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.


ensembl_gene_id: PMI07_002314
symbol: EUB95826.1
gene_biotype: protein_coding
description:
  TIGRFAM: membrane-associated zinc metalloprotease; PFAM: peptidase M50, PDZ/DHR/GLGF domain protein; KEGG: zinc metallopeptidase; SMART: PDZ/DHR/GLGF domain protein.


ensembl_gene_id: PMI07_002315
symbol: EUB95827.1
gene_biotype: protein_coding
description:
  PFAM: phosphatidate cytidylyltransferase; KEGG: cdsAch, phosphatidate cytidylyltransferase; Belongs to the CDS family.


ensembl_gene_id: PMI07_002316
symbol: EUB95828.1
gene_biotype: protein_coding
description:
  Undecaprenyl pyrophosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.


ensembl_gene_id: PMI07_002317
symbol: frr
gene_biotype: protein_coding
description:
  Ribosome-recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.


ensembl_gene_id: PMI07_002319
symbol: tsf
gene_biotype: protein_coding
description:
  Elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.


ensembl_gene_id: PMI07_002320
symbol: rpsB
gene_biotype: protein_coding
description:
  TIGRFAM: ribosomal protein S2; HAMAP : ribosomal protein S2; KEGG: rpsB, 30S ribosomal protein S2; PFAM: ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.


ensembl_gene_id: PMI07_002323
symbol: EUB95835.1
gene_biotype: protein_coding
description:
  PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: glycerophosphoryl diester phosphodiesterase.


ensembl_gene_id: PMI07_002328
symbol: EUB95840.1
gene_biotype: protein_coding
description:
  TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit clpA; PFAM: ATPase AAA-2 domain protein, AAA ATPase central domain protein, Clp domain protein, Clp ATPase domain-containing protein; KEGG: clpA, ATP-dependent Clp protease ATP-binding subunit ClpA; SMART: Clp ATPase domain-containing protein, AAA ATPase; Belongs to the ClpA/ClpB family.


ensembl_gene_id: PMI07_002333
symbol: EUB95845.1
gene_biotype: protein_coding
description:
  SMART: serine acetyltransferase domain protein; TIGRFAM: serine O-acetyltransferase; KEGG: serine acetyltransferase; PFAM: serine acetyltransferase domain protein, transferase hexapeptide repeat containing protein.


ensembl_gene_id: PMI07_002337
symbol: EUB95849.1
gene_biotype: protein_coding
description:
  TIGRFAM: cystathionine beta-lyase; KEGG: metC, cystathionine beta-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein.


ensembl_gene_id: PMI07_002339
symbol: EUB95851.1
gene_biotype: protein_coding
description:
  ABC-type transporter, periplasmic subunit family 3; KEGG: bztA, glutamate/glutamine/aspartate/asparagine-binding protein bztA; PFAM: ABC-type transporter, periplasmic subunit family 3; SMART: ABC-type transporter, periplasmic subunit family 3.


ensembl_gene_id: PMI07_002341
symbol: EUB95853.1
gene_biotype: protein_coding
description:
  KEGG: polar amino acid ABC transporter inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: ABC-type transporter, integral membrane subunit.


ensembl_gene_id: PMI07_002342
symbol: EUB95854.1
gene_biotype: protein_coding
description:
  Phosphonate-transporting ATPase; PFAM: ABC transporter related protein; KEGG: aapP, general L-amino acid transport ATP-binding protein AapP; SMART: AAA ATPase.


ensembl_gene_id: PMI07_002345
symbol: EUB95857.1
gene_biotype: protein_coding
description:
  PFAM: integrase family protein, Domain of unknown function DUF4102, integrase domain protein SAM domain protein; KEGG: DNA integration/recombination/invertion protein; Belongs to the 'phage' integrase family.


ensembl_gene_id: PMI07_002357
symbol: EUB95869.1
gene_biotype: protein_coding
description:
  KEGG: N-acetylmuramoyl-L-alanine amidase Cell wall hydrolase, Autolysin, ORFL3; PFAM: N-acetylmuramoyl-L-alanine amidase family 2; SMART: N-acetylmuramoyl-L-alanine amidase family 2.


ensembl_gene_id: PMI07_002401
symbol: EUB95913.1
gene_biotype: protein_coding
description:
  KEGG: recJ, single-stranded-DNA-specific exonuclease RecJ; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein, phosphoesterase DHHA1.


ensembl_gene_id: PMI07_002403
symbol: EUB95915.1
gene_biotype: protein_coding
description:
  PFAM: homoserine dehydrogenase, homoserine dehydrogenase NAD-binding protein, amino acid-binding ACT domain-containing protein; KEGG: homoserine dehydrogenase.


ensembl_gene_id: PMI07_002406
symbol: EUB95918.1
gene_biotype: protein_coding
description:
  KEGG: phbC, poly-beta-hydroxybutyrate polymerase; TIGRFAM: poly(R)-hydroxyalkanoic acid synthase, class I; PFAM: Poly-beta-hydroxybutyrate polymerase domain protein, alpha/beta hydrolase fold containing protein.


ensembl_gene_id: PMI07_002407
symbol: sfsA
gene_biotype: protein_coding
description:
  TIGRFAM: sugar fermentation stimulation protein; HAMAP : Sugar fermentation stimulation protein A; KEGG: sfsA, sugar fermentation stimulation protein A; PFAM: sugar fermentation stimulation protein; Belongs to the SfsA family.


ensembl_gene_id: PMI07_002408
symbol: EUB95920.1
gene_biotype: protein_coding
description:
  KEGG: addiction module antitoxin; TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system.


ensembl_gene_id: PMI07_002411
symbol: EUB95923.1
gene_biotype: protein_coding
description:
  KEGG: radC, DNA repair protein RadC; TIGRFAM: DNA repair protein RadC; PFAM: RadC-like JAB domain; Belongs to the UPF0758 family.


ensembl_gene_id: PMI07_002414
symbol: EUB95926.1
gene_biotype: protein_coding
description:
  Nickel-transporting ATPase, Fe(3+)-transporting ATPase; PFAM: ABC transporter related protein, Oligopeptide/dipeptide ABC transporter domain protein; KEGG: ABC transporter permease; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.


ensembl_gene_id: PMI07_002417
symbol: EUB95929.1
gene_biotype: protein_coding
description:
  PFAM: ABC-type transporter, integral membrane subunit, Oligopeptide transport permease C-like, N-terminal domain; KEGG: dipeptide transport system permease dppC.


ensembl_gene_id: PMI07_002418
symbol: EUB95930.1
gene_biotype: protein_coding
description:
  PFAM: ABC-type transporter, integral membrane subunit; KEGG: dppB, dipeptide ABC transporter permease.


ensembl_gene_id: PMI07_002421
symbol: EUB95933.1
gene_biotype: protein_coding
description:
  NAD(P)(+) transhydrogenase (B-specific); KEGG: soluble pyridine nucleotide transhydrogenase; PFAM: Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain, FAD-dependent pyridine nucleotide-disulfide oxidoreductase, pyridine nucleotide-disulfide oxidoreductase dimerization region.


ensembl_gene_id: PMI07_002422
symbol: rpsD
gene_biotype: protein_coding
description:
  Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.


ensembl_gene_id: PMI07_002432
symbol: trmJ
gene_biotype: protein_coding
description:
  RNA methyltransferase, TrmH family, group 1; Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA.


ensembl_gene_id: PMI07_002435
symbol: EUB95947.1
gene_biotype: protein_coding
description:
  TIGRFAM: isocitrate dehydrogenase, NADP-dependent; KEGG: icdA, isocitrate dehydrogenase; PFAM: Isopropylmalate dehydrogenase-like domain; Belongs to the isocitrate and isopropylmalate dehydrogenases family.


ensembl_gene_id: PMI07_002440
symbol: tig
gene_biotype: protein_coding
description:
  Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.


ensembl_gene_id: PMI07_002443
symbol: trmFO
gene_biotype: protein_coding
description:
  Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO; Catalyzes the folate-dependent formation of 5-methyl-uridine at position 54 (M-5-U54) in all tRNAs; Belongs to the MnmG family. TrmFO subfamily.


ensembl_gene_id: PMI07_002447
symbol: yajC
gene_biotype: protein_coding
description:
  Preprotein translocase, YajC subunit; The SecYEG-SecDF-YajC-YidC holo-translocon (HTL) protein secretase/insertase is a supercomplex required for protein secretion, insertion of proteins into membranes, and assembly of membrane protein complexes. While the SecYEG complex is essential for assembly of a number of proteins and complexes, the SecDF-YajC-YidC subcomplex facilitates these functions.


ensembl_gene_id: PMI07_002449
symbol: EUB95961.1
gene_biotype: protein_coding
description:
  Peptidase M23; KEGG: lppB, lipoprotein; PFAM: Peptidase M23, Peptidoglycan-binding lysin domain-containing protein; SMART: Peptidoglycan-binding LysM.


ensembl_gene_id: PMI07_002450
symbol: EUB95962.1
gene_biotype: protein_coding
description:
  KEGG: protein-L-isoaspartate o-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase.


ensembl_gene_id: PMI07_002451
symbol: surE
gene_biotype: protein_coding
description:
  Survival protein SurE-like phosphatase/nucleotidase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.


ensembl_gene_id: PMI07_002452
symbol: serS
gene_biotype: protein_coding
description:
  Seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).


ensembl_gene_id: PMI07_002453
symbol: tatC
gene_biotype: protein_coding
description:
  Sec-independent protein translocase, TatC subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides.


ensembl_gene_id: PMI07_002454
symbol: tatB
gene_biotype: protein_coding
description:
  Sec-independent protein translocase protein tatB-like protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation.


ensembl_gene_id: PMI07_002455
symbol: tatA
gene_biotype: protein_coding
description:
  Sec-independent protein translocase protein tatA/E-like protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.


ensembl_gene_id: PMI07_002456
symbol: EUB95968.1
gene_biotype: protein_coding
description:
  Chromosome segregation and condensation protein, ScpB; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: PMI07_002457
symbol: EUB95969.1
gene_biotype: protein_coding
description:
  Chromosome segregation and condensation protein ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: PMI07_002460
symbol: argS
gene_biotype: protein_coding
description:
  KEGG: argS, arginyl-tRNA synthetase; TIGRFAM: arginyl-tRNA synthetase; HAMAP : Arginyl-tRNA synthetase.


ensembl_gene_id: PMI07_002461
symbol: EUB95973.1
gene_biotype: protein_coding
description:
  Deoxyguanosinetriphosphate triphosphohydrolase-like protein; SMART: metal-dependent phosphohydrolase HD region; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase; KEGG: deoxyguanosinetriphosphate triphosphohydrolase-like protein; HAMAP : Deoxyguanosinetriphosphate triphosphohydrolase-like protein; PFAM: Phosphohydrolase-associated domain, metal-dependent phosphohydrolase HD sub domain-containing protein; Belongs to the dGTPase family. Type 2 subfamily.


ensembl_gene_id: PMI07_002462
symbol: EUB95974.1
gene_biotype: protein_coding
description:
  KEGG: iron-sulfur cluster assembly accessory protein; TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; Belongs to the HesB/IscA family.


ensembl_gene_id: PMI07_002463
symbol: EUB95975.1
gene_biotype: protein_coding
description:
  TIGRFAM: exodeoxyribonuclease III, exodeoxyribonuclease III Xth; KEGG: exonuclease III; PFAM: Endonuclease/exonuclease/phosphatase.


ensembl_gene_id: PMI07_002464
symbol: EUB95976.1
gene_biotype: protein_coding
description:
  KEGG: exoR, exopolysaccharide production negative regulator; PFAM: Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein.


ensembl_gene_id: PMI07_002465
symbol: EUB95977.1
gene_biotype: protein_coding
description:
  PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: putative outer membrane transport protein.


ensembl_gene_id: PMI07_002466
symbol: valS
gene_biotype: protein_coding
description:
  Valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.


ensembl_gene_id: PMI07_002468
symbol: EUB95980.1
gene_biotype: protein_coding
description:
  KEGG: pcm2, protein-L-isoaspartate O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase.


ensembl_gene_id: PMI07_002475
symbol: EUB95987.1
gene_biotype: protein_coding
description:
  PFAM: Rieske [2Fe-2S] iron-sulfur domain-containing protein; KEGG: Rieske (2Fe-2S) domain-containing protein.


ensembl_gene_id: PMI07_002480
symbol: EUB95992.1
gene_biotype: protein_coding
description:
  PFAM: ABC-type transporter, integral membrane subunit, Oligopeptide transport permease C-like, N-terminal domain; KEGG: binding-protein dependent transport system inner membrane protein.


ensembl_gene_id: PMI07_002481
symbol: EUB95993.1
gene_biotype: protein_coding
description:
  PFAM: ABC-type transporter, integral membrane subunit; KEGG: binding-protein dependent transport system inner membrane protein.


ensembl_gene_id: PMI07_002483
symbol: EUB95995.1
gene_biotype: protein_coding
description:
  SMART: AAA ATPase; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: oligopeptide/dipeptide ABC transporter ATPase; PFAM: Oligopeptide/dipeptide ABC transporter domain protein, ABC transporter related protein; Belongs to the ABC transporter superfamily.


ensembl_gene_id: PMI07_002485
symbol: EUB95997.1
gene_biotype: protein_coding
description:
  TIGRFAM: ATP-dependent DNA helicase RecQ, ATP-dependent DNA helicase, RecQ family; PFAM: RQC domain-containing protein, helicase domain-containing protein, HRDC domain protein, DEAD/DEAH box helicase domain protein; KEGG: recQ, ATP-dependent DNA helicase RecQ; SMART: RQC domain-containing protein, DEAD-like helicase, helicase domain-containing protein, HRDC domain protein.


ensembl_gene_id: PMI07_002488
symbol: EUB96000.1
gene_biotype: protein_coding
description:
  KEGG: GntR family transcriptional regulator; PFAM: regulatory protein GntR HTH, aminotransferase class I and II; SMART: regulatory protein GntR HTH.


ensembl_gene_id: PMI07_002489
symbol: EUB96001.1
gene_biotype: protein_coding
description:
  KEGG: phaG, putative monovalent cation/H+ antiporter subunit G; TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit; PFAM: Na+/H+ antiporter subunit.


ensembl_gene_id: PMI07_002490
symbol: EUB96002.1
gene_biotype: protein_coding
description:
  PFAM: multiple resistance and pH regulation protein F; KEGG: phaF, PH Adaption potassium efflux system.


ensembl_gene_id: PMI07_002492
symbol: EUB96004.1
gene_biotype: protein_coding
description:
  PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: phaD1, monovalent cation/H+ antiporter subunit D.


ensembl_gene_id: PMI07_002493
symbol: EUB96005.1
gene_biotype: protein_coding
description:
  PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: phaC1, monovalent cation/H+ antiporter subunit C.


ensembl_gene_id: PMI07_002494
symbol: EUB96006.1
gene_biotype: protein_coding
description:
  TIGRFAM: monovalent cation/H+ antiporter, subunit 1; KEGG: phaA, putative monovalent cation/H+ antiporter subunit A; PFAM: NADH/Ubiquinone/plastoquinone (complex I), NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein, Na+/H+ antiporter MnhB subunit-related protein, Domain of unknown function DUF4040.


ensembl_gene_id: PMI07_002497
symbol: EUB96009.1
gene_biotype: protein_coding
description:
  Galactonate dehydratase; PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: Starvation-sensing protein; SMART: Mandelate racemase/muconate lactonizing protein.


ensembl_gene_id: PMI07_002498
symbol: EUB96010.1
gene_biotype: protein_coding
description:
  Nickel-transporting ATPase, Polyamine-transporting ATPase; PFAM: ABC transporter related protein, Oligopeptide/dipeptide ABC transporter domain protein; KEGG: putative oligopeptide ABC transporter ATP-binding protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.


ensembl_gene_id: PMI07_002499
symbol: EUB96011.1
gene_biotype: protein_coding
description:
  PFAM: ABC-type transporter, integral membrane subunit, Oligopeptide transport permease C-like, N-terminal domain; KEGG: transmembrane component of ABC transporter.


ensembl_gene_id: PMI07_002502
symbol: EUB96014.1
gene_biotype: protein_coding
description:
  KEGG: transcriptional regulator; PFAM: GntR domain protein, regulatory protein GntR HTH; SMART: regulatory protein GntR HTH, GntR domain protein.


ensembl_gene_id: PMI07_002503
symbol: EUB96015.1
gene_biotype: protein_coding
description:
  KEGG: hppD, 4-hydroxyphenylpyruvate dioxygenase; PFAM: Xylose isomerase domain-containing protein TIM barrel, Glyoxalase/bleomycin resistance protein/dioxygenase.


ensembl_gene_id: PMI07_002508
symbol: EUB96020.1
gene_biotype: protein_coding
description:
  anti-ECFsigma factor, ChrR; KEGG: anti-ECF sigma factor ChrR; TIGRFAM: anti-sigma factor, ChrR family; PFAM: ChrR-like cupin domain.


ensembl_gene_id: PMI07_002510
symbol: EUB96022.1
gene_biotype: protein_coding
description:
  KEGG: alaS1, alanyl-tRNA synthetase; PFAM: Threonyl/alanyl tRNA synthetase SAD, Alanyl-tRNA synthetase, class IIc; SMART: Threonyl/alanyl tRNA synthetase SAD.


ensembl_gene_id: PMI07_002511
symbol: EUB96023.1
gene_biotype: protein_coding
description:
  PFAM: Rhodanese-like protein; KEGG: sseA, 3-mercaptopyruvate sulfurtransferase; SMART: Rhodanese-like protein.


ensembl_gene_id: PMI07_002515
symbol: EUB96027.1
gene_biotype: protein_coding
description:
  PFAM: transcriptional regulator PadR family protein; KEGG: PadR-like family transcriptional regulator.


ensembl_gene_id: PMI07_002516
symbol: EUB96028.1
gene_biotype: protein_coding
description:
  SMART: alanine dehydrogenase/PNT domain protein; TIGRFAM: alanine dehydrogenase; KEGG: alanine dehydrogenase; PFAM: alanine dehydrogenase/PNT domain protein; Belongs to the AlaDH/PNT family.


ensembl_gene_id: PMI07_002521
symbol: EUB96033.1
gene_biotype: protein_coding
description:
  Signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: CHASE3 domain protein, HWE histidine kinase, PAS fold-4 domain protein; KEGG: sensor histidine kinase; SMART: HWE histidine kinase, PAS domain containing protein, PAC repeat-containing protein.


ensembl_gene_id: PMI07_002523
symbol: EUB96035.1
gene_biotype: protein_coding
description:
  2',3'-cyclic-nucleotide 2'-phosphodiesterase; KEGG: cpdB, putative 2,3-cyclic nucleotide 2-phosphodiesterase/3-nucleotidase; PFAM: 5'-Nucleotidase domain-containing protein, metallophosphoesterase; Belongs to the 5'-nucleotidase family.


ensembl_gene_id: PMI07_002524
symbol: EUB96036.1
gene_biotype: protein_coding
description:
  KEGG: phenazine-like biosynthesis protein; TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein.


ensembl_gene_id: PMI07_002526
symbol: EUB96038.1
gene_biotype: protein_coding
description:
  PFAM: Mg2 transporter protein CorA family protein; KEGG: CorA metal ion transporter (MIT) family transporter.


ensembl_gene_id: PMI07_002528
symbol: azoR
gene_biotype: protein_coding
description:
  FMN-dependent NADH-azoreductase; Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family.


ensembl_gene_id: PMI07_002529
symbol: EUB96041.1
gene_biotype: protein_coding
description:
  TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: sensory box/GGDEF family protein; SMART: GGDEF domain containing protein.


ensembl_gene_id: PMI07_002530
symbol: EUB96042.1
gene_biotype: protein_coding
description:
  Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: ammonium transporter, diguanylate cyclase, PAS sensor protein; PFAM: Ammonium transporter AmtB-like, GGDEF domain containing protein, EAL domain-containing protein; KEGG: ammonium transporter; SMART: EAL domain-containing protein, GGDEF domain containing protein.


ensembl_gene_id: PMI07_002534
symbol: ilvA
gene_biotype: protein_coding
description:
  Threonine dehydratase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA.


ensembl_gene_id: PMI07_002535
symbol: EUB96047.1
gene_biotype: protein_coding
description:
  Cation transporter; Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA; Belongs to the TrkH potassium transport family.


ensembl_gene_id: PMI07_002538
symbol: EUB96050.1
gene_biotype: protein_coding
description:
  PFAM: short-chain dehydrogenase/reductase SDR; KEGG: short-chain dehydrogenase/reductase sdr; SMART: Polyketide synthase/Fatty acid synthase, KR.


ensembl_gene_id: PMI07_002539
symbol: EUB96051.1
gene_biotype: protein_coding
description:
  TIGRFAM: flavoprotein WrbA; HAMAP : Flavoprotein wrbA; KEGG: TrpR binding protein WrbA; PFAM: NADPH-dependent FMN reductase.


ensembl_gene_id: PMI07_002540
symbol: EUB96052.1
gene_biotype: protein_coding
description:
  KEGG: putative molybdenum cofactor biosynthesis protein; PFAM: molybdopterin binding domain-containing protein; SMART: molybdopterin binding domain-containing protein.


ensembl_gene_id: PMI07_002542
symbol: gpt
gene_biotype: protein_coding
description:
  Xanthine phosphoribosyltransferase; Acts on guanine, xanthine and to a lesser extent hypoxanthine; Belongs to the purine/pyrimidine phosphoribosyltransferase family. XGPT subfamily.


ensembl_gene_id: PMI07_002543
symbol: EUB96055.1
gene_biotype: protein_coding
description:
  Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen.


ensembl_gene_id: PMI07_002545
symbol: EUB96057.1
gene_biotype: protein_coding
description:
  Transcriptional regulator, XRE family; KEGG: hypothetical protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein.


ensembl_gene_id: PMI07_002558
symbol: EUB96070.1
gene_biotype: protein_coding
description:
  2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.


ensembl_gene_id: PMI07_002561
symbol: EUB96073.1
gene_biotype: protein_coding
description:
  KEGG: recombination factor protein RarA; PFAM: MgsA AAA+ ATPase domain-containing protein, AAA ATPase central domain protein; SMART: AAA ATPase.


ensembl_gene_id: PMI07_002562
symbol: EUB96074.1
gene_biotype: protein_coding
description:
  SMART: PDZ/DHR/GLGF domain protein; TIGRFAM: protease Do; KEGG: htrA family protein; PFAM: PDZ/DHR/GLGF domain protein; Belongs to the peptidase S1C family.


ensembl_gene_id: PMI07_002567
symbol: ilvD
gene_biotype: protein_coding
description:
  PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; TIGRFAM: dihydroxy-acid dehydratase; HAMAP : Dihydroxy-acid dehydratase; KEGG: dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.


ensembl_gene_id: PMI07_002571
symbol: msrQ
gene_biotype: protein_coding
description:
  Sulfoxide reductase heme-binding subunit yedZ; Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalyti [...]


ensembl_gene_id: PMI07_002573
symbol: rplQ
gene_biotype: protein_coding
description:
  TIGRFAM: ribosomal protein L17; HAMAP : 50S ribosomal protein L17; KEGG: rplQ, 50S ribosomal protein L17; PFAM: ribosomal protein L17.


ensembl_gene_id: PMI07_002574
symbol: EUB96086.1
gene_biotype: protein_coding
description:
  PFAM: RNA polymerase alpha subunit domain protein, RNA polymerase dimerization; KEGG: rpoA, DNA-directed RNA polymerase subunit alpha.


ensembl_gene_id: PMI07_002575
symbol: EUB94797.1
gene_biotype: protein_coding
description:
  KEGG: rpoA, DNA-directed RNA polymerase subunit alpha; PFAM: RNA polymerase insert, RNA polymerase dimerization; SMART: RNA polymerase RpoA/D/Rpb3-type.


ensembl_gene_id: PMI07_002576
symbol: rpsK
gene_biotype: protein_coding
description:
  Ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.


ensembl_gene_id: PMI07_002577
symbol: rpsM
gene_biotype: protein_coding
description:
  Ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.


ensembl_gene_id: PMI07_002578
symbol: adk
gene_biotype: protein_coding
description:
  Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.


ensembl_gene_id: PMI07_002579
symbol: secY
gene_biotype: protein_coding
description:
  Protein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.


ensembl_gene_id: PMI07_002580
symbol: rplO
gene_biotype: protein_coding
description:
  Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.


ensembl_gene_id: PMI07_002581
symbol: rpmD
gene_biotype: protein_coding
description:
  TIGRFAM: ribosomal protein L30; HAMAP : ribosomal protein L30; KEGG: rpmD, 50S ribosomal protein L30; PFAM: Ribosomal protein L30, ferredoxin-like fold domain-containing protein.


ensembl_gene_id: PMI07_002582
symbol: rpsE
gene_biotype: protein_coding
description:
  Ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.


ensembl_gene_id: PMI07_002583
symbol: rplR
gene_biotype: protein_coding
description:
  Ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.


ensembl_gene_id: PMI07_002584
symbol: rplF
gene_biotype: protein_coding
description:
  Ribosomal protein L6, subgroup; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.


ensembl_gene_id: PMI07_002585
symbol: rpsH
gene_biotype: protein_coding
description:
  Ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.


ensembl_gene_id: PMI07_002586
symbol: rpsN
gene_biotype: protein_coding
description:
  30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.


ensembl_gene_id: PMI07_002587
symbol: rplE
gene_biotype: protein_coding
description:
  Ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.


ensembl_gene_id: PMI07_002588
symbol: rplX
gene_biotype: protein_coding
description:
  Ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.


ensembl_gene_id: PMI07_002589
symbol: rplN
gene_biotype: protein_coding
description:
  Ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.


ensembl_gene_id: PMI07_002590
symbol: rpsQ
gene_biotype: protein_coding
description:
  Ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.


ensembl_gene_id: PMI07_002591
symbol: rpmC
gene_biotype: protein_coding
description:
  TIGRFAM: ribosomal protein L29; HAMAP : 50S ribosomal protein L29; KEGG: rpmC, 50S ribosomal protein L29; PFAM: ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family.


ensembl_gene_id: PMI07_002592
symbol: rplP
gene_biotype: protein_coding
description:
  50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.


ensembl_gene_id: PMI07_002593
symbol: rpsC
gene_biotype: protein_coding
description:
  Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.


ensembl_gene_id: PMI07_002594
symbol: rplV
gene_biotype: protein_coding
description:
  Ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.


ensembl_gene_id: PMI07_002595
symbol: rpsS
gene_biotype: protein_coding
description:
  Ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.


ensembl_gene_id: PMI07_002596
symbol: rplB
gene_biotype: protein_coding
description:
  Ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.


ensembl_gene_id: PMI07_002597
symbol: rplW
gene_biotype: protein_coding
description:
  Ribosomal protein L25/L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.


ensembl_gene_id: PMI07_002599
symbol: rplC
gene_biotype: protein_coding
description:
  Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.


ensembl_gene_id: PMI07_002600
symbol: rpsJ
gene_biotype: protein_coding
description:
  30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.


ensembl_gene_id: PMI07_002601
symbol: tuf
gene_biotype: protein_coding
description:
  Hypothetical protein; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.


ensembl_gene_id: PMI07_002602
symbol: fusA
gene_biotype: protein_coding
description:
  Translation elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 s [...]


ensembl_gene_id: PMI07_002603
symbol: rpsG
gene_biotype: protein_coding
description:
  Ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.


ensembl_gene_id: PMI07_002604
symbol: rpsL
gene_biotype: protein_coding
description:
  Ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.


ensembl_gene_id: PMI07_002606
symbol: rpoC
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: PMI07_002608
symbol: rplL
gene_biotype: protein_coding
description:
  50S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.


ensembl_gene_id: PMI07_002609
symbol: rplJ
gene_biotype: protein_coding
description:
  50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.


ensembl_gene_id: PMI07_002610
symbol: rplA
gene_biotype: protein_coding
description:
  Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.


ensembl_gene_id: PMI07_002611
symbol: rplK
gene_biotype: protein_coding
description:
  Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.


ensembl_gene_id: PMI07_002612
symbol: nusG
gene_biotype: protein_coding
description:
  NusG antitermination factor; Participates in transcription elongation, termination and antitermination.


ensembl_gene_id: PMI07_002613
symbol: secE
gene_biotype: protein_coding
description:
  Preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.


ensembl_gene_id: PMI07_002614
symbol: EUB94836.1
gene_biotype: protein_coding
description:
  PFAM: Capsule polysaccharide biosynthesis protein; KEGG: capsular polysaccharide biosynthesis protein.


ensembl_gene_id: PMI07_002615
symbol: EUB94837.1
gene_biotype: protein_coding
description:
  PFAM: Capsule polysaccharide biosynthesis protein; KEGG: rkpJ, capsular polysaccharide biosynthesis protein.


ensembl_gene_id: PMI07_002618
symbol: EUB94840.1
gene_biotype: protein_coding
description:
  TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU), RNA 2-O ribose methyltransferase substrate binding protein; KEGG: tRNA/rRNA metyltransferase; SMART: RNA 2-O ribose methyltransferase substrate binding protein; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: PMI07_002619
symbol: cysQ
gene_biotype: protein_coding
description:
  3'(2'),5'-bisphosphate nucleotidase; Converts adenosine-3',5'-bisphosphate (PAP) to AMP. Belongs to the inositol monophosphatase superfamily. CysQ family.


ensembl_gene_id: PMI07_002620
symbol: EUB94842.1
gene_biotype: protein_coding
description:
  Nucleotide sugar dehydrogenase; SMART: UDP-glucose/GDP-mannose dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; KEGG: ugdH, UDP-glucose 6-dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase dimerization, UDP-glucose/GDP-mannose dehydrogenase.


ensembl_gene_id: PMI07_002622
symbol: EUB94844.1
gene_biotype: protein_coding
description:
  PFAM: Lytic transglycosylase catalytic, Sporulation domain-containing protein; KEGG: putative transglycosylase.


ensembl_gene_id: PMI07_002625
symbol: nadK
gene_biotype: protein_coding
description:
  NAD(+) kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.


ensembl_gene_id: PMI07_002627
symbol: EUB94849.1
gene_biotype: protein_coding
description:
  Drug resistance transporter, Bcr/CflA subfamily; KEGG: putative major facilitator superfamily (MFS) drug efflux transporter; TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1.


ensembl_gene_id: PMI07_002628
symbol: prfB
gene_biotype: protein_coding
description:
  Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.


ensembl_gene_id: PMI07_002629
symbol: EUB94851.1
gene_biotype: protein_coding
description:
  TIGRFAM: penicillin-binding protein, 1A family; KEGG: penicillin-binding protein; PFAM: glycosyl transferase family 51, penicillin-binding protein transpeptidase.


ensembl_gene_id: PMI07_002630
symbol: EUB94852.1
gene_biotype: protein_coding
description:
  KEGG: N-acetylmuramoyl-L-alanine amidase; PFAM: cell wall hydrolase/autolysin, localization of periplasmic protein complexes; SMART: cell wall hydrolase/autolysin.


ensembl_gene_id: PMI07_002631
symbol: rne
gene_biotype: protein_coding
description:
  Ribonuclease, Rne/Rng family; Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs. Belongs to the RNase E/G family. RNase E subfamily.


ensembl_gene_id: PMI07_002633
symbol: aroQ
gene_biotype: protein_coding
description:
  3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.


ensembl_gene_id: PMI07_002634
symbol: EUB94856.1
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase, biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: PMI07_002635
symbol: EUB94857.1
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase, biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: PMI07_002636
symbol: aat
gene_biotype: protein_coding
description:
  Leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine.


ensembl_gene_id: PMI07_002641
symbol: gatB
gene_biotype: protein_coding
description:
  Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily.


ensembl_gene_id: PMI07_002643
symbol: EUB94865.1
gene_biotype: protein_coding
description:
  UPF0386 protein yjhX; KEGG: hypothetical protein; HAMAP : UPF0386 protein yjhX; PFAM: Protein of unknown function DUF2084; Belongs to the UPF0386 family.


ensembl_gene_id: PMI07_002645
symbol: gatA
gene_biotype: protein_coding
description:
  Glutamyl-tRNA(Gln) amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).


ensembl_gene_id: PMI07_002646
symbol: gatC
gene_biotype: protein_coding
description:
  Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.


ensembl_gene_id: PMI07_002647
symbol: EUB94869.1
gene_biotype: protein_coding
description:
  KEGG: metal-dependent hydrolase; HAMAP : UPF0173 metal-dependent hydrolase; SMART: beta-lactamase domain protein; Belongs to the UPF0173 family.


ensembl_gene_id: PMI07_002648
symbol: EUB94870.1
gene_biotype: protein_coding
description:
  Holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.


ensembl_gene_id: PMI07_002654
symbol: pyrB
gene_biotype: protein_coding
description:
  PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region, aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain-containing protein; TIGRFAM: aspartate carbamoyltransferase; HAMAP : Aspartate carbamoyltransferase; KEGG: aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.


ensembl_gene_id: PMI07_002655
symbol: EUB94877.1
gene_biotype: protein_coding
description:
  KEGG: pyrC, dihydroorotase; TIGRFAM: dihydroorotase, multifunctional complex type; HAMAP : dihydroorotase multifunctional complex type.


ensembl_gene_id: PMI07_002656
symbol: plsY
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate acyltransferase; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.


ensembl_gene_id: PMI07_002659
symbol: topA
gene_biotype: protein_coding
description:
  DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]


ensembl_gene_id: PMI07_002660
symbol: rnr
gene_biotype: protein_coding
description:
  Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.


ensembl_gene_id: PMI07_002664
symbol: rpmG
gene_biotype: protein_coding
description:
  TIGRFAM: ribosomal protein L33; HAMAP : 50S ribosomal protein L33; KEGG: rpmG, 50S ribosomal protein L33; PFAM: ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family.


ensembl_gene_id: PMI07_002665
symbol: EUB94887.1
gene_biotype: protein_coding
description:
  TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein, response regulator receiver; KEGG: pleD, response regulator PleD; SMART: GGDEF domain containing protein, response regulator receiver.


ensembl_gene_id: PMI07_002670
symbol: dinB
gene_biotype: protein_coding
description:
  DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.


ensembl_gene_id: PMI07_002672
symbol: EUB94894.1
gene_biotype: protein_coding
description:
  DNA polymerase III, alpha subunit; SMART: phosphoesterase PHP domain protein; TIGRFAM: DNA polymerase III, alpha subunit; KEGG: dnaE, DNA polymerase III subunit alpha; PFAM: DNA polymerase III alpha subunit, PHP domain protein, nucleic acid binding OB-fold tRNA/helicase-type.


ensembl_gene_id: PMI07_002674
symbol: lolD
gene_biotype: protein_coding
description:
  Phosphonate-transporting ATPase; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.


ensembl_gene_id: PMI07_002675
symbol: EUB94897.1
gene_biotype: protein_coding
description:
  KEGG: ABC transporter permease; TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: MacB-like periplasmic core domain, protein of unknown function DUF214.


ensembl_gene_id: PMI07_002676
symbol: proS
gene_biotype: protein_coding
description:
  Prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro); Belongs to the class-II aminoacyl-tRNA synthetase family. ProS type 2 subfamily.


ensembl_gene_id: PMI07_002679
symbol: EUB94901.1
gene_biotype: protein_coding
description:
  Beta-lactamase domain protein; KEGG: metal dependent hydrolase; PFAM: beta-lactamase domain protein, RNA-metabolising metallo-beta-lactamase; SMART: beta-lactamase domain protein.


ensembl_gene_id: PMI07_002680
symbol: EUB94902.1
gene_biotype: protein_coding
description:
  KEGG: birA, biotin--; TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; PFAM: biotin/lipoate A/B protein ligase, biotin protein ligase domain protein.


ensembl_gene_id: PMI07_002681
symbol: nuoN
gene_biotype: protein_coding
description:
  NAD(P)H-quinone oxidoreductase subunit 2; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family.


ensembl_gene_id: PMI07_002682
symbol: EUB94904.1
gene_biotype: protein_coding
description:
  TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; KEGG: nuoM, NADH dehydrogenase I chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I), NADH:ubiquinone oxidoreductase, chain 4 domain-containing protein.


ensembl_gene_id: PMI07_002683
symbol: EUB94905.1
gene_biotype: protein_coding
description:
  TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; KEGG: nuoL, NADH dehydrogenase I subunit L; PFAM: NADH/Ubiquinone/plastoquinone (complex I), NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein, NADH dehydrogenase subunit 5 domain protein.


ensembl_gene_id: PMI07_002684
symbol: nuoK
gene_biotype: protein_coding
description:
  NAD(P)H-quinone oxidoreductase subunit 4L; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family.


ensembl_gene_id: PMI07_002685
symbol: EUB94907.1
gene_biotype: protein_coding
description:
  NADH-ubiquinone/plastoquinone oxidoreductase chain 6; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: PMI07_002686
symbol: nuoI
gene_biotype: protein_coding
description:
  NAD(P)H-quinone oxidoreductase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: PMI07_002687
symbol: nuoH
gene_biotype: protein_coding
description:
  NAD(P)H-quinone oxidoreductase subunit 1; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone.


ensembl_gene_id: PMI07_002688
symbol: EUB94910.1
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase, chain G; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family.


ensembl_gene_id: PMI07_002690
symbol: EUB94912.1
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase, F subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family.


ensembl_gene_id: PMI07_002691
symbol: EUB94913.1
gene_biotype: protein_coding
description:
  TIGRFAM: NADH-quinone oxidoreductase, E subunit; KEGG: nuoE, NADH dehydrogenase I subunit E; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit.


ensembl_gene_id: PMI07_002693
symbol: nuoD
gene_biotype: protein_coding
description:
  NAD(P)H-quinone oxidoreductase subunit H; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family.


ensembl_gene_id: PMI07_002694
symbol: nuoC
gene_biotype: protein_coding
description:
  NAD(P)H-quinone oxidoreductase subunit J; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family.


ensembl_gene_id: PMI07_002695
symbol: nuoB
gene_biotype: protein_coding
description:
  NAD(P)H-quinone oxidoreductase subunit K; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: PMI07_002696
symbol: nuoA
gene_biotype: protein_coding
description:
  NAD(P)H-quinone oxidoreductase subunit 3; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family.


ensembl_gene_id: PMI07_002700
symbol: EUB94922.1
gene_biotype: protein_coding
description:
  PFAM: transferase hexapeptide repeat containing protein; KEGG: CysE/LacA/LpxA/NodL family acetyltransferase.


ensembl_gene_id: PMI07_002701
symbol: EUB94923.1
gene_biotype: protein_coding
description:
  PFAM: glycosyl transferase group 1; KEGG: group 1 glycosyl transferase; overlaps another CDS with the same product name.


ensembl_gene_id: PMI07_002708
symbol: fcl
gene_biotype: protein_coding
description:
  GDP-L-fucose synthase; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction.


ensembl_gene_id: PMI07_002709
symbol: gmd
gene_biotype: protein_coding
description:
  GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.


ensembl_gene_id: PMI07_002710
symbol: EUB94932.1
gene_biotype: protein_coding
description:
  KEGG: exopolysaccharide polymerization/transport protein; TIGRFAM: exopolysaccharide transport protein family; PFAM: AAA domain, lipopolysaccharide biosynthesis protein.


ensembl_gene_id: PMI07_002711
symbol: EUB94933.1
gene_biotype: protein_coding
description:
  PFAM: Soluble ligand binding domain-containing protein; KEGG: pssN, exopolysaccharide export protein.


ensembl_gene_id: PMI07_002714
symbol: EUB94936.1
gene_biotype: protein_coding
description:
  PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rkpH, short-chain dehydrogenase/reductase RkpH; SMART: Polyketide synthase/Fatty acid synthase, KR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: PMI07_002715
symbol: EUB94937.1
gene_biotype: protein_coding
description:
  8-amino-7-oxononanoate synthase; KEGG: rkpG, acyl-transferase transferase protein RkpG; PFAM: aminotransferase class I and II.


ensembl_gene_id: PMI07_002716
symbol: EUB94938.1
gene_biotype: protein_coding
description:
  6-deoxyerythronolide-B synthase, NADPH:quinone reductase; PFAM: Beta-ketoacyl synthase, Acyl transferase, acyl carrier protein familyprotein, Alcohol dehydrogenase zinc-binding domain protein, KR domain protein, Alcohol dehydrogenase GroES domain protein; KEGG: rkpA, putative type I polyketide synthase RkpA; SMART: Polyketide synthase, enoylreductase, Polyketide synthase, beta-ketoacyl synthase region-containing protein, Polyketide synthase/Fatty acid synthase, KR, Polyketide synthase, phosphopantetheine-binding protein, Polyketide synthase, dehydratase domain-containing protein, Polyk [...]


ensembl_gene_id: PMI07_002717
symbol: EUB94939.1
gene_biotype: protein_coding
description:
  PFAM: polysaccharide export protein, Soluble ligand binding domain-containing protein; KEGG: rkpU, K-antigen export protein RkpU.


ensembl_gene_id: PMI07_002724
symbol: EUB94946.1
gene_biotype: protein_coding
description:
  Histone family protein DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.


ensembl_gene_id: PMI07_002725
symbol: lon
gene_biotype: protein_coding
description:
  ATP-dependent protease La; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.


ensembl_gene_id: PMI07_002726
symbol: clpX
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease ATP-binding subunit clpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.


ensembl_gene_id: PMI07_002728
symbol: EUB94950.1
gene_biotype: protein_coding
description:
  TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: GGDEF family protein; SMART: GGDEF domain containing protein.


ensembl_gene_id: PMI07_002729
symbol: EUB94951.1
gene_biotype: protein_coding
description:
  TIGRFAM: gamma-glutamyltransferase; KEGG: gamma-glutamyltranspeptidase; PFAM: gamma-glutamyltranspeptidase.


ensembl_gene_id: PMI07_002731
symbol: EUB94953.1
gene_biotype: protein_coding
description:
  PFAM: short-chain dehydrogenase/reductase SDR; KEGG: short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: PMI07_002737
symbol: EUB94959.1
gene_biotype: protein_coding
description:
  3-oxoacyl-(acyl-carrier-protein) reductase; KEGG: NAD(P)-binding glucose/ribitol dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR.


ensembl_gene_id: PMI07_002738
symbol: EUB94960.1
gene_biotype: protein_coding
description:
  TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; KEGG: cysd3, O-acetylhomoserine (thiol)-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein.


ensembl_gene_id: PMI07_002742
symbol: rplM
gene_biotype: protein_coding
description:
  Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.


ensembl_gene_id: PMI07_002743
symbol: rpsI
gene_biotype: protein_coding
description:
  KEGG: rpsI, 30S ribosomal protein S9; HAMAP : Ribosomal protein S9, bacterial/plastid; PFAM: ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.


ensembl_gene_id: PMI07_002745
symbol: EUB94967.1
gene_biotype: protein_coding
description:
  TIGRFAM: phenylalanine-4-hydroxylase; KEGG: phhA, phenylalanine 4-monooxygenase; PFAM: Aromatic amino acid hydroxylase domain-containing protein.


ensembl_gene_id: PMI07_002746
symbol: EUB94968.1
gene_biotype: protein_coding
description:
  TIGRFAM: agmatinase; KEGG: agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase; Belongs to the arginase family.


ensembl_gene_id: PMI07_002747
symbol: argC
gene_biotype: protein_coding
description:
  N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 2 subfamily.


ensembl_gene_id: PMI07_002749
symbol: ctaA
gene_biotype: protein_coding
description:
  Heme A synthase; Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group; Belongs to the COX15/CtaA family. Type 2 subfamily.


ensembl_gene_id: PMI07_002752
symbol: EUB94974.1
gene_biotype: protein_coding
description:
  PFAM: lipopolysaccharide biosynthesis protein, Cobyrinic acid ac-diamide synthase; KEGG: polysaccharide synthesis/transport transmembrane protein.


ensembl_gene_id: PMI07_002753
symbol: EUB94975.1
gene_biotype: protein_coding
description:
  PFAM: polysaccharide export protein, Soluble ligand binding domain-containing protein; KEGG: gumB, polysaccharide export protein.


ensembl_gene_id: PMI07_002755
symbol: EUB94977.1
gene_biotype: protein_coding
description:
  KEGG: glycosyltransferase; TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase, exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase.


ensembl_gene_id: PMI07_002764
symbol: ihfA
gene_biotype: protein_coding
description:
  Integration host factor subunit alpha; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family.


ensembl_gene_id: PMI07_002765
symbol: fabH
gene_biotype: protein_coding
description:
  3-oxoacyl-(acyl-carrier-protein) synthase 3; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.


ensembl_gene_id: PMI07_002766
symbol: plsX
gene_biotype: protein_coding
description:
  Phosphate acyltransferase; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.


ensembl_gene_id: PMI07_002770
symbol: hppA
gene_biotype: protein_coding
description:
  Pyrophosphate-energized proton pump; Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force.


ensembl_gene_id: PMI07_002772
symbol: nusB
gene_biotype: protein_coding
description:
  NusB antitermination factor; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.


ensembl_gene_id: PMI07_002773
symbol: ribH
gene_biotype: protein_coding
description:
  6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.


ensembl_gene_id: PMI07_002775
symbol: EUB94997.1
gene_biotype: protein_coding
description:
  Metal dependent phosphohydrolase with GAF sensor; KEGG: two component system, transcriptional regulatory protein; PFAM: metal-dependent phosphohydrolase HD sub domain-containing protein, GAF domain protein; SMART: metal-dependent phosphohydrolase HD region, GAF domain protein.


ensembl_gene_id: PMI07_002776
symbol: EUB94998.1
gene_biotype: protein_coding
description:
  TIGRFAM: riboflavin synthase, alpha subunit; KEGG: ribc, riboflavin synthase alpha chain; PFAM: Lumazine-binding domain.


ensembl_gene_id: PMI07_002777
symbol: EUB94999.1
gene_biotype: protein_coding
description:
  TIGRFAM: riboflavin biosynthesis protein RibD; KEGG: ribD, diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-5-phosphoribosylamino uracil reductase; PFAM: CMP/dCMP deaminase zinc-binding protein, bifunctional deaminase-reductase domain protein.


ensembl_gene_id: PMI07_002778
symbol: nrdR
gene_biotype: protein_coding
description:
  Transcriptional regulator, NrdR; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family.


ensembl_gene_id: PMI07_002779
symbol: glyA
gene_biotype: protein_coding
description:
  Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.


ensembl_gene_id: PMI07_002785
symbol: EUB95007.1
gene_biotype: protein_coding
description:
  Porphobilinogen synthase; PFAM: delta-aminolevulinic acid dehydratase; KEGG: hemB, delta-aminolevulinic acid dehydratase; SMART: delta-aminolevulinic acid dehydratase; Belongs to the ALAD family.


ensembl_gene_id: PMI07_002787
symbol: bpt
gene_biotype: protein_coding
description:
  arginyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily.


ensembl_gene_id: PMI07_002789
symbol: EUB95011.1
gene_biotype: protein_coding
description:
  KEGG: SpoVT/AbrB family transcriptional regulatory protein; PFAM: SpoVT/AbrB domain-containing protein; SMART: SpoVT/AbrB domain-containing protein.


ensembl_gene_id: PMI07_002790
symbol: parC
gene_biotype: protein_coding
description:
  DNA topoisomerase IV, A subunit; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase GyrA/ParC subunit family. ParC type 1 subfamily.


ensembl_gene_id: PMI07_002796
symbol: aspS
gene_biotype: protein_coding
description:
  Aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.


ensembl_gene_id: PMI07_002799
symbol: rnd
gene_biotype: protein_coding
description:
  Ribonuclease D; Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides; Belongs to the RNase D family.


ensembl_gene_id: PMI07_002802
symbol: EUB95024.1
gene_biotype: protein_coding
description:
  KEGG: AraC family transcriptional regulator; PFAM: AraC protein arabinose-binding/dimerization, Helix-turn-helix, AraC domain-containing protein; SMART: Helix-turn-helix, AraC domain-containing protein.


ensembl_gene_id: PMI07_002807
symbol: ppk
gene_biotype: protein_coding
description:
  Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.


ensembl_gene_id: PMI07_002810
symbol: purM
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine cyclo-ligase; PFAM: AIR synthase related protein domain protein, AIR synthase related protein; TIGRFAM: phosphoribosylformylglycinamidine cyclo-ligase; HAMAP : phosphoribosylformylglycinamidine cyclo-ligase; KEGG: purM, 5'-phosphoribosyl-5-aminoimidazole synthetase.


ensembl_gene_id: PMI07_002811
symbol: purN
gene_biotype: protein_coding
description:
  Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.


ensembl_gene_id: PMI07_002815
symbol: EUB95037.1
gene_biotype: protein_coding
description:
  KEGG: nudF, ADP-ribose pyrophosphatase; TIGRFAM: nucleoside diphosphate pyrophosphatase; PFAM: NUDIX hydrolase.


ensembl_gene_id: PMI07_002816
symbol: EUB95038.1
gene_biotype: protein_coding
description:
  PFAM: molybdopterin oxidoreductase, molybdopterin dinucleotide-binding region, molybdopterin oxidoreductase Fe4S4 region; KEGG: reductase; SMART: molybdopterin oxidoreductase Fe4S4 region; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: PMI07_002817
symbol: rlmJ
gene_biotype: protein_coding
description:
  Protein of unknown function DUF519; Specifically methylates the adenine in position 2030 of 23S rRNA.


ensembl_gene_id: PMI07_002821
symbol: uvrC
gene_biotype: protein_coding
description:
  UvrABC system protein C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.


ensembl_gene_id: PMI07_002822
symbol: EUB95044.1
gene_biotype: protein_coding
description:
  TIGRFAM: CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; KEGG: pgsA, phosphatidylglycerophosphate synthase; PFAM: CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: PMI07_002823
symbol: EUB95045.1
gene_biotype: protein_coding
description:
  KEGG: moaD, molybdopterin converting factor subunit 1; TIGRFAM: molybdopterin converting factor, subunit 1; PFAM: thiamine S protein.


ensembl_gene_id: PMI07_002824
symbol: EUB95046.1
gene_biotype: protein_coding
description:
  PFAM: molybdopterin biosynthesis MoaE protein; KEGG: moaE, molybdopterin converting factor subunit 2 protein.


ensembl_gene_id: PMI07_002828
symbol: ndk
gene_biotype: protein_coding
description:
  Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.


ensembl_gene_id: PMI07_002832
symbol: EUB95054.1
gene_biotype: protein_coding
description:
  KEGG: Crp/Fnr family transcriptional regulator; PFAM: cyclic nucleotide-binding protein; SMART: cyclic nucleotide-binding protein.


ensembl_gene_id: PMI07_002841
symbol: pepA
gene_biotype: protein_coding
description:
  Cytosol aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.


ensembl_gene_id: PMI07_002843
symbol: EUB95065.1
gene_biotype: protein_coding
description:
  PFAM: permease YjgP/YjgQ family protein; KEGG: permease; overlaps another CDS with the same product name.


ensembl_gene_id: PMI07_002845
symbol: lptD
gene_biotype: protein_coding
description:
  Organic solvent tolerance protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.


ensembl_gene_id: PMI07_002847
symbol: pdxA
gene_biotype: protein_coding
description:
  4-hydroxythreonine-4-phosphate dehydrogenase; Catalyzes the NAD(P)-dependent oxidation of 4-(phosphooxy)-L- threonine (HTP) into 2-amino-3-oxo-4-(phosphooxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP).


ensembl_gene_id: PMI07_002848
symbol: rsmA
gene_biotype: protein_coding
description:
  Ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.


ensembl_gene_id: PMI07_002854
symbol: EUB95076.1
gene_biotype: protein_coding
description:
  KEGG: hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP00255; PFAM: YicC-like domain-containing protein, domain of unknown function DUF1732.


ensembl_gene_id: PMI07_002855
symbol: mltG
gene_biotype: protein_coding
description:
  Aminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family.


ensembl_gene_id: PMI07_002858
symbol: EUB95080.1
gene_biotype: protein_coding
description:
  3-oxoacyl-(acyl-carrier-protein) reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: PMI07_002859
symbol: EUB95081.1
gene_biotype: protein_coding
description:
  Malonyl CoA-acyl carrier protein transacylase; SMART: Polyketide synthase, acyl transferase domain-containing protein; TIGRFAM: malonyl CoA-acyl carrier protein transacylase; KEGG: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase.


ensembl_gene_id: PMI07_002862
symbol: EUB95084.1
gene_biotype: protein_coding
description:
  PFAM: Animal heme peroxidase; KEGG: myeloperoxidase thyroid peroxidase cyclooxygenase catalytic subunit.


ensembl_gene_id: PMI07_002864
symbol: rpsR
gene_biotype: protein_coding
description:
  30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.


ensembl_gene_id: PMI07_002867
symbol: EUB95089.1
gene_biotype: protein_coding
description:
  Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily.


ensembl_gene_id: PMI07_002869
symbol: EUB95091.1
gene_biotype: protein_coding
description:
  Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.


ensembl_gene_id: PMI07_002871
symbol: radA
gene_biotype: protein_coding
description:
  DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.


ensembl_gene_id: PMI07_002873
symbol: purF
gene_biotype: protein_coding
description:
  Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.


ensembl_gene_id: PMI07_002876
symbol: pyrE
gene_biotype: protein_coding
description:
  Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).


ensembl_gene_id: PMI07_002878
symbol: cysS
gene_biotype: protein_coding
description:
  PFAM: Cysteinyl-tRNA synthetase/mycothiol ligase; TIGRFAM: cysteinyl-tRNA synthetase; HAMAP : Cysteinyl-tRNA synthetase; KEGG: cysS, cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: PMI07_002880
symbol: EUB95102.1
gene_biotype: protein_coding
description:
  KEGG: virulence-associated protein VapB-like protein; PFAM: SpoVT/AbrB domain-containing protein; SMART: SpoVT/AbrB domain-containing protein.


ensembl_gene_id: PMI07_002882
symbol: EUB95104.1
gene_biotype: protein_coding
description:
  PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: glutathione-dependent formaldehyde-activating protein; overlaps another CDS with the same product name.


ensembl_gene_id: PMI07_002883
symbol: EUB95105.1
gene_biotype: protein_coding
description:
  PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: hypothetical protein; overlaps another CDS with the same product name.


ensembl_gene_id: PMI07_002885
symbol: EUB95107.1
gene_biotype: protein_coding
description:
  KEGG: proline iminopeptidase; TIGRFAM: proline iminopeptidase; PFAM: alpha/beta hydrolase fold containing protein; Belongs to the peptidase S33 family.


ensembl_gene_id: PMI07_002886
symbol: EUB95108.1
gene_biotype: protein_coding
description:
  SMART: LeuA allosteric (dimerization) domain-containing protein; TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein; KEGG: 2-isopropylmalate synthase/homocitrate synthase family protein; PFAM: pyruvate carboxyltransferase, LeuA allosteric (dimerization) domain-containing protein; Belongs to the alpha-IPM synthase/homocitrate synthase family.


ensembl_gene_id: PMI07_002887
symbol: rsgA
gene_biotype: protein_coding
description:
  Ribosome biogenesis GTPase RsgA; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.


ensembl_gene_id: PMI07_002891
symbol: EUB95113.1
gene_biotype: protein_coding
description:
  KEGG: hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP02391; PFAM: Conserved hypothetical protein CHP02391.


ensembl_gene_id: PMI07_002892
symbol: EUB95114.1
gene_biotype: protein_coding
description:
  PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; KEGG: putative protein-L-isoaspartate.


ensembl_gene_id: PMI07_002893
symbol: EUB95115.1
gene_biotype: protein_coding
description:
  KEGG: transporter DMT superfamily protein; TIGRFAM: RarD protein, DMT superfamily transporter; PFAM: protein of unknown function DUF6 transmembrane.


ensembl_gene_id: PMI07_002895
symbol: EUB95117.1
gene_biotype: protein_coding
description:
  KEGG: hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP00730; PFAM: Conserved hypothetical protein CHP00730; Belongs to the LOG family.


ensembl_gene_id: PMI07_002896
symbol: EUB95118.1
gene_biotype: protein_coding
description:
  KEGG: hypothetical protein; PFAM: Peptidoglycan-binding lysin domain-containing protein; SMART: Peptidoglycan-binding LysM.


ensembl_gene_id: PMI07_002898
symbol: EUB95120.1
gene_biotype: protein_coding
description:
  Xenobiotic-transporting ATPase; PFAM: ABC transporter transmembrane region, ABC transporter related protein; KEGG: ABC transporter; SMART: AAA ATPase.


ensembl_gene_id: PMI07_002902
symbol: EUB95124.1
gene_biotype: protein_coding
description:
  PFAM: short-chain dehydrogenase/reductase SDR; KEGG: short-chain dehydrogenase; SMART: Polyketide synthase/Fatty acid synthase, KR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: PMI07_002904
symbol: psd
gene_biotype: protein_coding
description:
  Phosphatidylserine decarboxylase proenzyme; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).


ensembl_gene_id: PMI07_002905
symbol: EUB95127.1
gene_biotype: protein_coding
description:
  PFAM: CDP-alcohol phosphatidyltransferase; KEGG: pssA, phosphatidylserine synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: PMI07_002909
symbol: EUB95131.1
gene_biotype: protein_coding
description:
  KEGG: transmembrane protein; HAMAP : UPF0060 membrane protein ynfA; PFAM: protein of unknown function UPF0060.


ensembl_gene_id: PMI07_002911
symbol: EUB95133.1
gene_biotype: protein_coding
description:
  Plasmid maintenance system antidote protein, XRE family; KEGG: addiction module antidote protein, HigA family; TIGRFAM: addiction module antidote protein, HigA family; PFAM: helix-turn-helix domain protein.


ensembl_gene_id: PMI07_002913
symbol: EUB95135.1
gene_biotype: protein_coding
description:
  KEGG: hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP02301; PFAM: Conserved hypothetical protein CHP02301.


ensembl_gene_id: PMI07_002917
symbol: EUB95139.1
gene_biotype: protein_coding
description:
  Folate-binding protein YgfZ; KEGG: aminomethyltransferase (glycine cleavage) protein; TIGRFAM: folate-binding protein YgfZ; PFAM: glycine cleavage T protein (aminomethyl transferase), Glycine cleavage T-protein barrel; Belongs to the GcvT family.


ensembl_gene_id: PMI07_002918
symbol: EUB95140.1
gene_biotype: protein_coding
description:
  PFAM: metal-dependent phosphohydrolase HD sub domain-containing protein; KEGG: hypothetical protein.


ensembl_gene_id: PMI07_002921
symbol: EUB95143.1
gene_biotype: protein_coding
description:
  RES domain protein; KEGG: hypothetical protein; PFAM: RES domain protein; SMART: RES domain protein.


ensembl_gene_id: PMI07_002924
symbol: EUB95146.1
gene_biotype: protein_coding
description:
  PFAM: ABC-type transporter, integral membrane subunit; KEGG: ABC transporter, membrane spanning protein.


ensembl_gene_id: PMI07_002925
symbol: EUB95147.1
gene_biotype: protein_coding
description:
  Taurine-transporting ATPase; PFAM: ABC transporter related protein; KEGG: ABC transporter nucleotide-binding protein/ATPase; SMART: AAA ATPase.


ensembl_gene_id: PMI07_002928
symbol: EUB95150.1
gene_biotype: protein_coding
description:
  KEGG: hypothetical protein; PFAM: metal-dependent phosphohydrolase HD sub domain-containing protein; SMART: metal-dependent phosphohydrolase HD region.


ensembl_gene_id: PMI07_002929
symbol: EUB95151.1
gene_biotype: protein_coding
description:
  PFAM: MOSC domain containing protein, MOSC domain protein beta barrel domain protein; KEGG: hypothetical protein.


ensembl_gene_id: PMI07_002940
symbol: era
gene_biotype: protein_coding
description:
  GTP-binding protein Era-like-protein; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.


ensembl_gene_id: PMI07_002941
symbol: rnc
gene_biotype: protein_coding
description:
  Ribonuclease 3; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.


ensembl_gene_id: PMI07_002942
symbol: EUB95164.1
gene_biotype: protein_coding
description:
  TIGRFAM: signal peptidase I; KEGG: sipf, prokaryotic type I signal peptidase; PFAM: Peptidase S24/S26A/S26B, conserved region, Peptidase S26, conserved region; Belongs to the peptidase S26 family.


ensembl_gene_id: PMI07_002943
symbol: acpS
gene_biotype: protein_coding
description:
  Holo-(acyl-carrier-protein) synthase; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family.


ensembl_gene_id: PMI07_002947
symbol: EUB95169.1
gene_biotype: protein_coding
description:
  (p)ppGpp synthetase I, SpoT/RelA; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.


ensembl_gene_id: PMI07_002948
symbol: rpoZ
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.


ensembl_gene_id: PMI07_002950
symbol: EUB95172.1
gene_biotype: protein_coding
description:
  TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: Ada metal-binding domain-containing protein, Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding protein, Helix-turn-helix, AraC domain-containing protein; KEGG: ada, 6-O-methylguanine DNA methyltransferase; SMART: Helix-turn-helix, AraC domain-containing protein.


ensembl_gene_id: PMI07_002952
symbol: smpB
gene_biotype: protein_coding
description:
  SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...]


ensembl_gene_id: PMI07_002953
symbol: dapA
gene_biotype: protein_coding
description:
  Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).


ensembl_gene_id: PMI07_002955
symbol: EUB95177.1
gene_biotype: protein_coding
description:
  Porin; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane.


ensembl_gene_id: PMI07_002957
symbol: EUB95179.1
gene_biotype: protein_coding
description:
  KEGG: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; PFAM: HpcH/HpaI aldolase; Belongs to the HpcH/HpaI aldolase family.


ensembl_gene_id: PMI07_002958
symbol: EUB95180.1
gene_biotype: protein_coding
description:
  KEGG: ferredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulfide oxidoreductase, Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain.


ensembl_gene_id: PMI07_002962
symbol: EUB95184.1
gene_biotype: protein_coding
description:
  PFAM: Sel1 domain protein repeat-containing protein; KEGG: Sel1 domain-containing protein repeat-containing protein.


ensembl_gene_id: PMI07_002971
symbol: amn
gene_biotype: protein_coding
description:
  AMP nucleosidase; Catalyzes the hydrolysis of the N-glycosidic bond of AMP to form adenine and ribose 5-phosphate. Involved in regulation of AMP concentrations.


ensembl_gene_id: PMI07_002976
symbol: EUB95198.1
gene_biotype: protein_coding
description:
  Acetylornithine transaminase; KEGG: bioA, adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: PMI07_002977
symbol: EUB95199.1
gene_biotype: protein_coding
description:
  Glutamate--putrescine ligase; KEGG: glutamine synthetase; PFAM: glutamine synthetase catalytic region.


ensembl_gene_id: PMI07_002979
symbol: EUB95201.1
gene_biotype: protein_coding
description:
  TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: GGDEF domain-containing protein; SMART: GGDEF domain containing protein.


ensembl_gene_id: PMI07_002983
symbol: EUB95205.1
gene_biotype: protein_coding
description:
  TIGRFAM: zinc-binding alcohol dehydrogenase family protein; PFAM: Alcohol dehydrogenase zinc-binding domain protein, Alcohol dehydrogenase GroES domain protein; KEGG: Zn-dependent oxidoreductase; SMART: Polyketide synthase, enoylreductase; Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily.


ensembl_gene_id: PMI07_002987
symbol: EUB95209.1
gene_biotype: protein_coding
description:
  Electron-transferring-flavoprotein dehydrogenase; Accepts electrons from ETF and reduces ubiquinone.


ensembl_gene_id: PMI07_002991
symbol: EUB95213.1
gene_biotype: protein_coding
description:
  TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: protein secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: PMI07_002992
symbol: EUB95214.1
gene_biotype: protein_coding
description:
  PFAM: acriflavin resistance protein; KEGG: AcrB/AcrD/AcrF family multidrug efflux protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: PMI07_002997
symbol: EUB95219.1
gene_biotype: protein_coding
description:
  TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily; KEGG: DNA polymerase; SMART: Uracil-DNA glycosylase superfamily.


ensembl_gene_id: PMI07_003001
symbol: EUB95223.1
gene_biotype: protein_coding
description:
  TIGRFAM: aminopeptidase N; KEGG: pepN, aminopeptidase N; PFAM: Peptidase M1, alanyl aminopeptidase, C-terminal, Peptidase M1 membrane alanine aminopeptidase.


ensembl_gene_id: PMI07_003006
symbol: EUB95228.1
gene_biotype: protein_coding
description:
  Multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein, PAS fold-3 domain protein, histidine kinase A domain protein; KEGG: multi-sensor signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein, histidine kinase A domain protein, PAC repeat-containing protein.


ensembl_gene_id: PMI07_003007
symbol: glnE
gene_biotype: protein_coding
description:
  UTP-GlnB uridylyltransferase, GlnD / adenyl transferase, GlnE; Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds  [...]


ensembl_gene_id: PMI07_003008
symbol: EUB95230.1
gene_biotype: protein_coding
description:
  Integral membrane sensor signal transduction histidine kinase; KEGG: ragB, two component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein, histidine kinase A domain protein, histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein, histidine kinase HAMP region domain protein, histidine kinase A domain protein.


ensembl_gene_id: PMI07_003009
symbol: EUB95231.1
gene_biotype: protein_coding
description:
  Two component transcriptional regulator, winged helix family; KEGG: ragA, two component response regulator; PFAM: transcriptional regulator domain-containing protein, response regulator receiver; SMART: response regulator receiver, transcriptional regulator domain-containing protein.


ensembl_gene_id: PMI07_003010
symbol: EUB95232.1
gene_biotype: protein_coding
description:
  SMART: PDZ/DHR/GLGF domain protein; TIGRFAM: protease Do; KEGG: dop, serine protease DO-like protease; PFAM: PDZ/DHR/GLGF domain protein; Belongs to the peptidase S1C family.


ensembl_gene_id: PMI07_003012
symbol: EUB95234.1
gene_biotype: protein_coding
description:
  KEGG: cycK, cytochrome c-type synthesis protein; TIGRFAM: cytochrome c-type biogenesis protein CcmF; PFAM: cytochrome c assembly protein.


ensembl_gene_id: PMI07_003013
symbol: ccmE
gene_biotype: protein_coding
description:
  Cytochrome c-type biogenesis protein ccmE; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. Belongs to the CcmE/CycJ family.


ensembl_gene_id: PMI07_003016
symbol: EUB95238.1
gene_biotype: protein_coding
description:
  KEGG: hypothetical protein; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein.


ensembl_gene_id: PMI07_003017
symbol: EUB95239.1
gene_biotype: protein_coding
description:
  Two component transcriptional regulator, winged helix family; KEGG: two component response regulator; PFAM: transcriptional regulator domain-containing protein, response regulator receiver; SMART: response regulator receiver, transcriptional regulator domain-containing protein.


ensembl_gene_id: PMI07_003021
symbol: EUB95243.1
gene_biotype: protein_coding
description:
  KEGG: NlpC/P60 family phage cell wall peptidase; TIGRFAM: phage cell wall peptidase, NlpC/P60 family; PFAM: NLP/P60 protein.


ensembl_gene_id: PMI07_003023
symbol: EUB95245.1
gene_biotype: protein_coding
description:
  KEGG: hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP02217; PFAM: Conserved hypothetical protein CHP02217.


ensembl_gene_id: PMI07_003027
symbol: EUB95249.1
gene_biotype: protein_coding
description:
  KEGG: Phage major tail protein; TIGRFAM: phage major tail protein, TP901-1 family; PFAM: major tail protein TP901-1.


ensembl_gene_id: PMI07_003032
symbol: EUB95254.1
gene_biotype: protein_coding
description:
  KEGG: phage head-tail adaptor; TIGRFAM: phage head-tail adaptor; PFAM: head-tail joining family protein.


ensembl_gene_id: PMI07_003034
symbol: EUB95256.1
gene_biotype: protein_coding
description:
  KEGG: gp36, phage phi-C31 major capsid gp36-like protein; TIGRFAM: phage major capsid protein, HK97 family; PFAM: Caudovirus, capsid.


ensembl_gene_id: PMI07_003035
symbol: EUB95257.1
gene_biotype: protein_coding
description:
  KEGG: gp35, phage prohead protease; TIGRFAM: phage prohead protease, HK97 family; PFAM: peptidase U35 phage prohead HK97.


ensembl_gene_id: PMI07_003038
symbol: EUB95260.1
gene_biotype: protein_coding
description:
  Transcriptional regulator, CopG family; PFAM: CopG-like domain-containing protein DNA-binding protein; KEGG: CopG-like DNA-binding.


ensembl_gene_id: PMI07_003039
symbol: EUB95261.1
gene_biotype: protein_coding
description:
  Phage portal protein, HK97 family; KEGG: gp34, phage head portal protein; TIGRFAM: phage portal protein, HK97 family; PFAM: portal protein.


ensembl_gene_id: PMI07_003040
symbol: EUB95262.1
gene_biotype: protein_coding
description:
  KEGG: Stress responsive alpha-beta barrel domain protein; PFAM: Stress responsive alpha-beta barrel domain-containing protein; SMART: Stress responsive alpha-beta barrel domain-containing protein.


ensembl_gene_id: PMI07_003045
symbol: selO
gene_biotype: protein_coding
description:
  UPF0061 protein ydiU; Catalyzes the transfer of adenosine 5'-monophosphate (AMP) to Ser, Thr or Tyr residues of target proteins (AMPylation). Belongs to the SELO family.


ensembl_gene_id: PMI07_003051
symbol: EUB95273.1
gene_biotype: protein_coding
description:
  TIGRFAM: Cu(I)-responsive transcriptional regulator; PFAM: Transcription regulator MerR DNA binding protein, regulatory protein MerR; KEGG: cueR, transcriptional regulator, MerR family; SMART: regulatory protein MerR.


ensembl_gene_id: PMI07_003052
symbol: EUB95274.1
gene_biotype: protein_coding
description:
  TIGRFAM: heavy metal translocating P-type ATPase, copper-translocating P-type ATPase, ATPase, P-type (transporting), HAD superfamily, subfamily IC; KEGG: copper transporting ATPase; PFAM: E1-E2 ATPase-associated domain protein, Heavy metal transport/detoxification protein, Haloacid dehalogenase domain protein hydrolase.


ensembl_gene_id: PMI07_003053
symbol: EUB95275.1
gene_biotype: protein_coding
description:
  KEGG: putative toxin; TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system.


ensembl_gene_id: PMI07_003055
symbol: EUB95277.1
gene_biotype: protein_coding
description:
  KEGG: LuxR family transcriptional regulator; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR.


ensembl_gene_id: PMI07_003056
symbol: EUB95278.1
gene_biotype: protein_coding
description:
  UPF0260 protein ycgN; KEGG: hypothetical protein; HAMAP : UPF0260 protein ycgN; PFAM: protein of unknown function UPF0153; Belongs to the UPF0260 family.


ensembl_gene_id: PMI07_003057
symbol: EUB95279.1
gene_biotype: protein_coding
description:
  TIGRFAM: penicillin-binding protein, 1A family; KEGG: pbp, penicillin binding protein; PFAM: glycosyl transferase family 51, penicillin-binding protein transpeptidase.


ensembl_gene_id: PMI07_003060
symbol: EUB95282.1
gene_biotype: protein_coding
description:
  Plasmid maintenance system antidote protein, XRE family; TIGRFAM: addiction module antidote protein, HigA family; PFAM: helix-turn-helix domain protein; KEGG: hypothetical protein; SMART: helix-turn-helix domain protein.


ensembl_gene_id: PMI07_003075
symbol: EUB95297.1
gene_biotype: protein_coding
description:
  KEGG: integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein, histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein, histidine kinase A domain protein.


ensembl_gene_id: PMI07_003080
symbol: EUB95302.1
gene_biotype: protein_coding
description:
  KEGG: hypothetical protein; PFAM: Chromosomal replication initiator DnaA domain-containing protein; SMART: Chromosomal replication initiator DnaA domain-containing protein.


ensembl_gene_id: PMI07_003082
symbol: EUB95304.1
gene_biotype: protein_coding
description:
  KEGG: mrpG, monovalent cation/H+ antiporter subunit G; TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit; PFAM: Na+/H+ antiporter subunit.


ensembl_gene_id: PMI07_003085
symbol: EUB95307.1
gene_biotype: protein_coding
description:
  NADH dehydrogenase (quinone); KEGG: mnhD, Na+/H+ antiporter; PFAM: NADH/Ubiquinone/plastoquinone (complex I).


ensembl_gene_id: PMI07_003088
symbol: EUB95310.1
gene_biotype: protein_coding
description:
  NADH dehydrogenase (quinone); KEGG: monovalent cation/H+ antiporter subunit A; PFAM: NADH/Ubiquinone/plastoquinone (complex I), NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein, Domain of unknown function DUF4040.


ensembl_gene_id: PMI07_003089
symbol: msrB
gene_biotype: protein_coding
description:
  PFAM: Methionine sulfoxide reductase B; TIGRFAM: methionine-R-sulfoxide reductase; HAMAP : Peptide methionine sulfoxide reductase msrB; KEGG: transcriptional regulator.


ensembl_gene_id: PMI07_003096
symbol: EUB95318.1
gene_biotype: protein_coding
description:
  KEGG: lrp5, AsnC family regulatory protein Lrp; PFAM: Transcription regulator, AsnC-type; SMART: Transcription regulator, AsnC-type.


ensembl_gene_id: PMI07_003115
symbol: EUB95337.1
gene_biotype: protein_coding
description:
  KEGG: cation efflux system protein; TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein.


ensembl_gene_id: PMI07_003120
symbol: EUB95342.1
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF1044; KEGG: RelE-like cytotoxic translational repressor of toxin-antitoxin stability system.


ensembl_gene_id: PMI07_003122
symbol: EUB95344.1
gene_biotype: protein_coding
description:
  TIGRFAM: proline iminopeptidase; KEGG: pip, proline iminopeptidase; Belongs to the peptidase S33 family.


ensembl_gene_id: PMI07_003132
symbol: EUB95354.1
gene_biotype: protein_coding
description:
  Manganese/iron superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.


ensembl_gene_id: PMI07_003135
symbol: tam
gene_biotype: protein_coding
description:
  Trans-aconitate 2-methyltransferase; Catalyzes the S-adenosylmethionine monomethyl esterification of trans-aconitate.


ensembl_gene_id: PMI07_003142
symbol: EUB95364.1
gene_biotype: protein_coding
description:
  Aryl-alcohol dehydrogenase (NADP(+)); KEGG: oxidoreductase, mocA; PFAM: NADP-dependent oxidoreductase domain.


ensembl_gene_id: PMI07_003145
symbol: EUB95367.1
gene_biotype: protein_coding
description:
  PFAM: Mg2 transporter protein CorA family protein; KEGG: magnesium Mg(2+) and cobalt Co(2+) transport protein (corA).


ensembl_gene_id: PMI07_003152
symbol: EUB95374.1
gene_biotype: protein_coding
description:
  KEGG: carboxylesterase, type B; PFAM: Carboxylesterase type B; Belongs to the type-B carboxylesterase/lipase family.


ensembl_gene_id: PMI07_003154
symbol: EUB95376.1
gene_biotype: protein_coding
description:
  PFAM: short-chain dehydrogenase/reductase SDR; KEGG: oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: PMI07_003155
symbol: EUB95377.1
gene_biotype: protein_coding
description:
  PFAM: bifunctional deaminase-reductase domain protein; KEGG: bifunctional deaminase-reductase domain-containing protein.


ensembl_gene_id: PMI07_003161
symbol: EUB95383.1
gene_biotype: protein_coding
description:
  Peroxiredoxin, Ohr subfamily; KEGG: ohr, organic hydroperoxide resistance protein; TIGRFAM: peroxiredoxin, Ohr subfamily; PFAM: OsmC family protein.


ensembl_gene_id: PMI07_003162
symbol: EUB95384.1
gene_biotype: protein_coding
description:
  KEGG: transcriptional regulator MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR.


ensembl_gene_id: PMI07_003167
symbol: EUB95389.1
gene_biotype: protein_coding
description:
  PFAM: Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain; KEGG: thioredoxin reductase.


ensembl_gene_id: PMI07_003169
symbol: EUB95391.1
gene_biotype: protein_coding
description:
  KEGG: ATP-dependent DNA ligase; TIGRFAM: ATP-dependent DNA ligase, PP_1105 family; PFAM: ATP dependent DNA ligase, ATP dependent DNA ligase domain protein, DNA ligase domain protein.


ensembl_gene_id: PMI07_003171
symbol: EUB95393.1
gene_biotype: protein_coding
description:
  KEGG: mRNA 3-end processing factor; TIGRFAM: Putative exonuclease, DNA ligase-associated; PFAM: beta-lactamase domain protein.


ensembl_gene_id: PMI07_003174
symbol: EUB95396.1
gene_biotype: protein_coding
description:
  KEGG: CopG family transcriptional regulator; TIGRFAM: addiction module antidote protein, CC2985 family; PFAM: Uncharacterized protein family UPF0156/MetJ /Arc repressor.


ensembl_gene_id: PMI07_003176
symbol: EUB95398.1
gene_biotype: protein_coding
description:
  TIGRFAM: diguanylate cyclase, PAS sensor protein; PFAM: GGDEF domain containing protein, GAF domain protein, PAS fold-4 domain protein; KEGG: sensory box/GGDEF family protein; SMART: GGDEF domain containing protein, PAC repeat-containing protein, GAF domain protein.


ensembl_gene_id: PMI07_003177
symbol: EUB95399.1
gene_biotype: protein_coding
description:
  TIGRFAM: twin-arg-translocated uncharacterized repeat protein, putative cofactor-binding repeat; KEGG: hypothetical protein.


ensembl_gene_id: PMI07_003179
symbol: EUB95401.1
gene_biotype: protein_coding
description:
  Putative transcriptional regulator, CopG/Arc/MetJ family; PFAM: Uncharacterized protein family UPF0156/MetJ.


ensembl_gene_id: PMI07_003192
symbol: EUB95414.1
gene_biotype: protein_coding
description:
  SMART: Polyketide synthase, enoylreductase; TIGRFAM: NAD(P)H quinone oxidoreductase, PIG3 family; KEGG: qor, quinone oxidoreductase; PFAM: Alcohol dehydrogenase zinc-binding domain protein, Alcohol dehydrogenase GroES domain protein.


ensembl_gene_id: PMI07_003193
symbol: EUB95415.1
gene_biotype: protein_coding
description:
  TIGRFAM: diguanylate cyclase; PFAM: EAL domain-containing protein, GGDEF domain containing protein, CBS domain containing protein; KEGG: sensory box/GGDEF family protein; SMART: EAL domain-containing protein, GGDEF domain containing protein.


ensembl_gene_id: PMI07_003195
symbol: EUB95417.1
gene_biotype: protein_coding
description:
  TIGRFAM: choline-sulfatase; KEGG: choline-sulfatase; PFAM: sulfatase, Choline sulfatase enzyme C-terminal domain.


ensembl_gene_id: PMI07_003196
symbol: betB
gene_biotype: protein_coding
description:
  Betaine aldehyde dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the reversible oxidation of betaine aldehyde to the corresponding acid.


ensembl_gene_id: PMI07_003197
symbol: EUB95419.1
gene_biotype: protein_coding
description:
  KEGG: hypothetical protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein.


ensembl_gene_id: PMI07_003199
symbol: betA
gene_biotype: protein_coding
description:
  Choline dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate.


ensembl_gene_id: PMI07_003205
symbol: EUB95427.1
gene_biotype: protein_coding
description:
  PFAM: Lysylphosphatidylglycerol synthetase, domain of unknown function DUF2156; KEGG: hypothetical protein.


ensembl_gene_id: PMI07_003206
symbol: cysA
gene_biotype: protein_coding
description:
  Sulfate ABC transporter, ATPase subunit; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system.


ensembl_gene_id: PMI07_003207
symbol: EUB95429.1
gene_biotype: protein_coding
description:
  KEGG: cysW, sulfate transport system permease cysW; TIGRFAM: sulfate ABC transporter, inner membrane subunit CysW, sulfate ABC transporter, inner membrane subunit; PFAM: ABC-type transporter, integral membrane subunit.


ensembl_gene_id: PMI07_003209
symbol: EUB95431.1
gene_biotype: protein_coding
description:
  TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; KEGG: ABC transporter, substrate binding protein (sulfate).


ensembl_gene_id: PMI07_003210
symbol: EUB95432.1
gene_biotype: protein_coding
description:
  KEGG: hypothetical protein; TIGRFAM: addiction module antidote protein, CC2985 family; PFAM: Uncharacterized protein family UPF0156/MetJ /Arc repressor.


ensembl_gene_id: PMI07_003211
symbol: EUB95433.1
gene_biotype: protein_coding
description:
  KEGG: transcriptional regulator; TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074.


ensembl_gene_id: PMI07_003213
symbol: cysD
gene_biotype: protein_coding
description:
  Sulfate adenylyltransferase subunit 2; PFAM: phosphoadenosine phosphosulfate reductase; TIGRFAM: sulfate adenylyltransferase, small subunit; HAMAP : Sulfate adenylyltransferase subunit 2; KEGG: cysD, sulfate adenylyltransferase subunit 2.


ensembl_gene_id: PMI07_003214
symbol: cysN
gene_biotype: protein_coding
description:
  Sulfate adenylyltransferase subunit 1; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.


ensembl_gene_id: PMI07_003217
symbol: EUB95439.1
gene_biotype: protein_coding
description:
  KEGG: beta-lactamase family protein; PFAM: beta-lactamase domain protein; SMART: beta-lactamase domain protein.


ensembl_gene_id: PMI07_003222
symbol: EUC01237.1
gene_biotype: protein_coding
description:
  TIGRFAM: pyruvate, phosphate dikinase; KEGG: ppdK, pyruvate phosphate dikinase; PFAM: PEP-utilizing protein, PEP-utilising protein mobile region, pyruvate phosphate dikinase PEP/pyruvate-binding protein; Belongs to the PEP-utilizing enzyme family.


ensembl_gene_id: PMI07_003223
symbol: smc
gene_biotype: protein_coding
description:
  Chromosome segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family.


ensembl_gene_id: PMI07_003227
symbol: EUC01242.1
gene_biotype: protein_coding
description:
  TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; KEGG: HAD-superfamily hydrolase, subfamily IA, variant 3.


ensembl_gene_id: PMI07_003228
symbol: EUC01243.1
gene_biotype: protein_coding
description:
  Putative phage repressor; PFAM: Peptidase S24/S26A/S26B, conserved region; KEGG: Mu phage bifunctional transcriptional repressor / serine protease Cro/CI family.


ensembl_gene_id: PMI07_003229
symbol: EUC01244.1
gene_biotype: protein_coding
description:
  PFAM: DNA methylase N-4/N-6 domain protein; KEGG: ccrM, cell cycle regulated site-specific DNA-methyltransferase; Belongs to the N(4)/N(6)-methyltransferase family.


ensembl_gene_id: PMI07_003241
symbol: EUC01256.1
gene_biotype: protein_coding
description:
  TIGRFAM: threonine synthase; KEGG: thrC, threonine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit.


ensembl_gene_id: PMI07_003242
symbol: EUC01257.1
gene_biotype: protein_coding
description:
  KEGG: peptidase M16 family protein; PFAM: peptidase M16 domain protein; Belongs to the peptidase M16 family.


ensembl_gene_id: PMI07_003243
symbol: EUC01258.1
gene_biotype: protein_coding
description:
  Ribosomal-protein-alanine N-acetyltransferase; KEGG: Acetyltransferase, including N-acetylase of ribosomal protein; PFAM: GCN5-related N-acetyltransferase.


ensembl_gene_id: PMI07_003244
symbol: EUC01259.1
gene_biotype: protein_coding
description:
  Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: diguanylate cyclase, PAS sensor protein; PFAM: EAL domain-containing protein, GGDEF domain containing protein, PAS fold-3 domain protein, Diverse 7TM receptor extracellular region 2; KEGG: sensory box/GGDEF family protein; SMART: EAL domain-containing protein, GGDEF domain containing protein, PAC repeat-containing protein.


ensembl_gene_id: PMI07_003251
symbol: EUC01266.1
gene_biotype: protein_coding
description:
  PFAM: Acyl-CoA dehydrogenase type 2 domain-containing protein, acyl-CoA dehydrogenase domain-containing protein; KEGG: acyl-CoA dehydrogenase.


ensembl_gene_id: PMI07_003254
symbol: EUC01269.1
gene_biotype: protein_coding
description:
  UPF0301 protein yqgE; KEGG: transcriptional regulator protein; HAMAP : UPF0301 protein yqgE; PFAM: protein of unknown function DUF179; Belongs to the UPF0301 (AlgH) family.


ensembl_gene_id: PMI07_003256
symbol: EUC01271.1
gene_biotype: protein_coding
description:
  Redoxin domain protein; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily.


ensembl_gene_id: PMI07_003257
symbol: EUC01272.1
gene_biotype: protein_coding
description:
  Phosphonate-transporting ATPase; PFAM: ABC transporter related protein; KEGG: ABC transporter ATP-binding protein; SMART: AAA ATPase.


ensembl_gene_id: PMI07_003258
symbol: EUC01273.1
gene_biotype: protein_coding
description:
  PFAM: ABC-type transporter, integral membrane subunit; KEGG: transmembrane component of ABC transporter.


ensembl_gene_id: PMI07_003259
symbol: EUC01274.1
gene_biotype: protein_coding
description:
  PFAM: ABC-type metal ion transporter, periplasmic subunit; KEGG: solute-binding component of ABC transporter; Belongs to the bacterial solute-binding protein 9 family.


ensembl_gene_id: PMI07_003260
symbol: EUC01275.1
gene_biotype: protein_coding
description:
  KEGG: hypothetical protein; PFAM: Stress responsive alpha-beta barrel domain-containing protein; SMART: Stress responsive alpha-beta barrel domain-containing protein.


ensembl_gene_id: PMI07_003263
symbol: thrB
gene_biotype: protein_coding
description:
  Homoserine kinase; PFAM: aminoglycoside phosphotransferase; TIGRFAM: homoserine kinase; HAMAP : Homoserine kinase; KEGG: thrB, homoserine kinase; Belongs to the pseudomonas-type ThrB family.


ensembl_gene_id: PMI07_003264
symbol: ispH
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.


ensembl_gene_id: PMI07_003266
symbol: EUC01281.1
gene_biotype: protein_coding
description:
  PFAM: Surfeit locus 1 family protein; KEGG: transmembrane cytochrome oxidase complex biogenesis protein.


ensembl_gene_id: PMI07_003268
symbol: ctaG
gene_biotype: protein_coding
description:
  Cytochrome c oxidase assembly protein ctaG; Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I; Belongs to the COX11/CtaG family.


ensembl_gene_id: PMI07_003270
symbol: ctaB
gene_biotype: protein_coding
description:
  Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.


ensembl_gene_id: PMI07_003271
symbol: EUC01286.1
gene_biotype: protein_coding
description:
  Cytochrome c oxidase subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.


ensembl_gene_id: PMI07_003272
symbol: EUC01287.1
gene_biotype: protein_coding
description:
  Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).


ensembl_gene_id: PMI07_003279
symbol: pdxH
gene_biotype: protein_coding
description:
  Pyridoxine/pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP).


ensembl_gene_id: PMI07_003281
symbol: EUC01296.1
gene_biotype: protein_coding
description:
  KEGG: dnaJ, molecular chaperone, DnaJ family; PFAM: heat shock protein DnaJ domain protein, chaperone DnaJ domain protein; SMART: heat shock protein DnaJ domain protein.


ensembl_gene_id: PMI07_003283
symbol: EUC01298.1
gene_biotype: protein_coding
description:
  KEGG: gpmB, phosphoglycerate mutase; PFAM: Phosphoglycerate mutase; SMART: Phosphoglycerate mutase; Belongs to the phosphoglycerate mutase family.


ensembl_gene_id: PMI07_003286
symbol: EUC01301.1
gene_biotype: protein_coding
description:
  Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: diguanylate cyclase; PFAM: EAL domain-containing protein, PAS fold-3 domain protein, GGDEF domain containing protein; KEGG: PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase; SMART: EAL domain-containing protein, GGDEF domain containing protein.


