# geneInfo

ensembl_gene_id: UJ101_00007
symbol: tatC
gene_biotype: protein_coding
description:
  Sec-independent protein translocase protein TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes.


ensembl_gene_id: UJ101_00008
symbol: kdsD|kpsF
gene_biotype: protein_coding
description:
  Arabinose-5-phosphate isomerase; Catalyzes the reversible aldol-ketol isomerization between D-ribulose 5-phosphate (Ru5P) and D-arabinose 5-phosphate (A5P). It is also able of sustaining the biosynthetic pathway of 3-deoxy-D-manno-octulosonate (KDO), a unique 8-carbon sugar component of lipopolysaccharides (LPSs) (By similarity); Belongs to the SIS family. GutQ/KpsF subfamily; Contains 2 CBS domains; Contains 1 SIS domain; KEGG: pat:Patl_0563 arabinose-5-phosphate isomerase.


ensembl_gene_id: UJ101_00009
symbol: recQ
gene_biotype: protein_coding
description:
  Participates in DNA replication and repair. Exhibits a magnesium-dependent ATP-dependent DNA-helicase activity that unwinds single- and double-stranded DNA in a 3'-5' direction (By similarity); Belongs to the helicase family. RecQ subfamily; Contains 1 helicase ATP-binding domain; Contains 1 helicase C-terminal domain; Contains 1 HRDC domain; KEGG: baco:OXB_2320 ATP-dependent DNA helicase RecQ.


ensembl_gene_id: UJ101_00011
symbol: tilS|mesJ
gene_biotype: protein_coding
description:
  tRNA(Ile)-lysidine synthetase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.


ensembl_gene_id: UJ101_00013
symbol: ppx-gppA
gene_biotype: protein_coding
description:
  Exopolyphosphatase; Belongs to the GppA/Ppx family; KEGG: crd:CRES_1615 exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase.


ensembl_gene_id: UJ101_00014
symbol: ppk
gene_biotype: protein_coding
description:
  Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.


ensembl_gene_id: UJ101_00015
symbol: rnz
gene_biotype: protein_coding
description:
  Ribonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family.


ensembl_gene_id: UJ101_00016
symbol: glgC
gene_biotype: protein_coding
description:
  Glucose-1-phosphate adenylyltransferase; Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family; KEGG: ipa:Isop_2357 glucose-1-phosphate adenylyltransferase.


ensembl_gene_id: UJ101_00018
symbol: crcB
gene_biotype: protein_coding
description:
  Putative fluoride ion transporter CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.


ensembl_gene_id: UJ101_00020
symbol: mnmA|trmU|TRMU
gene_biotype: protein_coding
description:
  tRNA-specific 2-thiouridylase MnmA; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.


ensembl_gene_id: UJ101_00022
symbol: NAGA
gene_biotype: protein_coding
description:
  alpha-N-acetylgalactosaminidase; Belongs to the DCC thiol-disulfide oxidoreductase family; KEGG: dfa:DFA_08734 alpha-N-acetylgalactosaminidase.


ensembl_gene_id: UJ101_00023
symbol: GGCX
gene_biotype: protein_coding
description:
  Peptidyl-glutamate 4-carboxylase; Mediates the vitamin K-dependent carboxylation of glutamate residues to calcium-binding gamma-carboxyglutamate (Gla) residues with the concomitant conversion of the reduced hydroquinone form of vitamin K to vitamin K epoxide. Belongs to the vitamin K-dependent gamma-carboxylase family; KEGG: pss:102449866 vitamin K-dependent gamma-carboxylase.


ensembl_gene_id: UJ101_00025
symbol: nrdA|nrdE
gene_biotype: protein_coding
description:
  Ribonucleoside-diphosphate reductase holoenzyme provides the precursors necessary for viral DNA synthesis. Allows virus growth in non-dividing cells. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides (By similarity); Belongs to the ribonucleoside diphosphate reductase large chain family; Contains 1 DOD-type homing endonuclease domain; KEGG: kdi:Krodi_1498 ribonucleoside-diphosphate reductase alpha chain.


ensembl_gene_id: UJ101_00027
symbol: nfnB|nfsB
gene_biotype: protein_coding
description:
  Putative NAD(P)H nitroreductase; Belongs to the nitroreductase family; KEGG: ccm:Ccan_16700 nitroreductase / dihydropteridine reductase; Oxidoreductases.


ensembl_gene_id: UJ101_00028
symbol: APD05581.1
gene_biotype: protein_coding
description:
  Glutathione-regulated potassium-efflux system ancillary protein KefG; Regulatory subunit of a potassium efflux system that confers protection against electrophiles. Required for full activity of KefB; Belongs to the NAD(P)H dehydrogenase (quinone) family. KefG subfamily.


ensembl_gene_id: UJ101_00033
symbol: APD05586.1
gene_biotype: protein_coding
description:
  HTH-type transcriptional regulator XapR; Positive regulator required for the expression of xapA and xapB. Binds to the inducer xanthosine. Contains 1 HTH lysR-type DNA-binding domain; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: UJ101_00041
symbol: prfC
gene_biotype: protein_coding
description:
  Peptide chain release factor; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.


ensembl_gene_id: UJ101_00054
symbol: APD05607.1
gene_biotype: protein_coding
description:
  DNA helicase; Belongs to the helicase family. RecQ subfamily; Contains 1 helicase ATP-binding domain; Contains 1 helicase C-terminal domain; Contains 1 HRDC domain; KEGG: hin:HI0728 ATP-dependent DNA helicase RecQ.


ensembl_gene_id: UJ101_00055
symbol: MTFMT|fmt
gene_biotype: protein_coding
description:
  methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.


ensembl_gene_id: UJ101_00056
symbol: APD05609.1
gene_biotype: protein_coding
description:
  DNA-binding protein HU-1; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.


ensembl_gene_id: UJ101_00061
symbol: rluD
gene_biotype: protein_coding
description:
  23S rRNA pseudouridine(1911/1915/1917) synthase; Responsible for synthesis of pseudouridine from uracil- 65 in transfer RNAs; In the C-terminal sectio; belongs to the pseudouridine synthase RluA family; To E.coli YqcC in the N-terminal section; KEGG: fbr:FBFL15_1537 23S rRNA pseudouridine1911/1915/1917 synthase.


ensembl_gene_id: UJ101_00062
symbol: APD05615.1
gene_biotype: protein_coding
description:
  Thioredoxin-2; Participates in various redox reactions through the reversible oxidation of its active center dithiol to a disulfide and catalyzes dithiol-disulfide exchange reactions. Belongs to the thioredoxin family; Contains 1 thioredoxin domain.


ensembl_gene_id: UJ101_00063
symbol: DPP4
gene_biotype: protein_coding
description:
  Dipeptidyl-peptidase IV; Serine proteinase. Releases tripeptides from the free amino terminus of proteins. Has a requirement for Pro in the P1 position, but is inactivated by Pro in the P1' position (By similarity); Belongs to the peptidase S9B family; KEGG: ccm:Ccan_17390 dipeptidyl-peptidase 4.


ensembl_gene_id: UJ101_00066
symbol: purD
gene_biotype: protein_coding
description:
  Phosphoribosylamine-glycine ligase; Belongs to the GARS family; Contains 1 ATP-grasp domain; KEGG: wgl:WIGMOR_0245 phosphoribosylamine--glycine ligase.


ensembl_gene_id: UJ101_00068
symbol: purH
gene_biotype: protein_coding
description:
  Belongs to the PurH family; KEGG: lfa:LFA_2662 phosphoribosylaminoimidazolecarboxamide formyltransferase.


ensembl_gene_id: UJ101_00069
symbol: purN
gene_biotype: protein_coding
description:
  Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.


ensembl_gene_id: UJ101_00075
symbol: APD05628.1
gene_biotype: protein_coding
description:
  Hydrolyzes N-substituted formamides, but not amides. N- benzylformamide is the preferred substrate, while N-butylformamide is hydrolyzed at a much lower rate. Has very low activity towards allylformamide, N-(2-cyclohex-1-enylethyl)formamide and N-(alpha- methylbenzyl)formamide.


ensembl_gene_id: UJ101_00076
symbol: dcp
gene_biotype: protein_coding
description:
  Peptidyl-dipeptidase Dcp; Removes dipeptides from the C-termini of N-blocked tripeptides, tetrapeptides and larger peptides. Belongs to the peptidase M3 family; KEGG: spc:Sputcn32_2508 peptidyl-dipeptidase Dcp.


ensembl_gene_id: UJ101_00078
symbol: cah
gene_biotype: protein_coding
description:
  Carbonate dehydratase; Reversible hydration of carbon dioxide. Belongs to the alpha-carbonic anhydrase family; KEGG: hms:HMU03230 carbonic anhydrase.


ensembl_gene_id: UJ101_00080
symbol: APD05633.1
gene_biotype: protein_coding
description:
  Cation exchanger which plays a central role in pigmentation, possibly by participating in ion transport in melanosomes. Probably transports 1 Ca(2+) and 1 K(+) in exchange for 4 Na(+); Belongs to the sodium/potassium/calcium exchanger family. SLC24A subfamily.


ensembl_gene_id: UJ101_00082
symbol: hpaF|hpcD
gene_biotype: protein_coding
description:
  5-carboxymethyl-2-hydroxymuconate Delta-isomerase; May have hydrolase activity; Belongs to the FAH family; KEGG: gur:Gura_3666 5-carboxymethyl-2-hydroxymuconate isomerase.


ensembl_gene_id: UJ101_00084
symbol: DPM1
gene_biotype: protein_coding
description:
  Dolichyl-phosphate beta-D-mannosyltransferase; Belongs to the glycosyltransferase 2 family; KEGG: dti:Desti_4859 dolichol-phosphate mannosyltransferase.


ensembl_gene_id: UJ101_00086
symbol: asnB|ASNS
gene_biotype: protein_coding
description:
  Asparagine synthase (glutamine-hydrolyzing); Belongs to the asparagine synthetase family; Contains 1 glutamine amidotransferase type-2 domain; KEGG: gfo:GFO_2750 asparagine synthase (glutamine-hydrolysing).


ensembl_gene_id: UJ101_00088
symbol: secA
gene_biotype: protein_coding
description:
  Protein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane.


ensembl_gene_id: UJ101_00089
symbol: pip
gene_biotype: protein_coding
description:
  Prolyl aminopeptidase; Releases the N-terminal proline from various substrates. Belongs to the peptidase S33 family.


ensembl_gene_id: UJ101_00092
symbol: HPD|hppD
gene_biotype: protein_coding
description:
  4-hydroxyphenylpyruvate dioxygenase; Belongs to the 4HPPD family; KEGG: win:WPG_1598 4-hydroxyphenylpyruvate dioxygenase.


ensembl_gene_id: UJ101_00095
symbol: APD05648.1
gene_biotype: protein_coding
description:
  Protein CsaA; Could serves as a molecular chaperone for exported proteins or alternatively acts by stabilizing the SecA protein. Contains 1 tRNA-binding domain.


ensembl_gene_id: UJ101_00098
symbol: rpsR
gene_biotype: protein_coding
description:
  30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.


ensembl_gene_id: UJ101_00100
symbol: mhpC
gene_biotype: protein_coding
description:
  2-hydroxy-6-oxonona-2,4-dienedioate hydrolase; Belongs to the DmpD/TodF/XylF esterase family; KEGG: req:REQ_43380 2-hydroxy-6-oxonona-2,4-dienedioate hydrolase.


ensembl_gene_id: UJ101_00106
symbol: nagZ
gene_biotype: protein_coding
description:
  beta-N-acetylhexosaminidase; Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide-linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N-acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides. Cleaves muropeptides, but not peptidoglycan; Belongs to the glycosyl hydrolase 3 family; KEGG: chu:CHU_0470 beta-N-acetylhexosaminidase.


ensembl_gene_id: UJ101_00109
symbol: APD05662.1
gene_biotype: protein_coding
description:
  HTH-type transcriptional regulator LrpB; Negative regulation of glyA transcription and kinB- dependent sporulation; Contains 1 HTH asnC-type DNA-binding domain.


ensembl_gene_id: UJ101_00110
symbol: ghrA
gene_biotype: protein_coding
description:
  Glyoxylate reductase (NADP(+)); Catalyzes the NADPH-dependent reduction of glyoxylate and hydroxypyruvate into glycolate and glycerate, respectively; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. GhrA subfamily; KEGG: bbd:Belba_3029 glyoxylate/hydroxypyruvate reductase A.


ensembl_gene_id: UJ101_00111
symbol: dnaJ
gene_biotype: protein_coding
description:
  Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...]


ensembl_gene_id: UJ101_00112
symbol: grpE
gene_biotype: protein_coding
description:
  Protein GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent i [...]


ensembl_gene_id: UJ101_00113
symbol: ntdC
gene_biotype: protein_coding
description:
  Glucose-6-phosphate 3-dehydrogenase; Involved in the biosynthesis of kanosamine (3-amino-3- deoxy-D-glucose), which is known to have antibiotic and antifungal properties, and to be a precursor of the antibiotic neotrehalosadiamine (3,3'-diamino-3,3'-dideoxy-alpha,beta- trehalose (NTD)). Catalyzes the oxidation of glucose 6-phosphate to 3-oxo-D-glucose 6-phosphate. It can only use NAD; Belongs to the Gfo/Idh/MocA family; KEGG: bsu:BSU10530 glucose-6-phosphate 3-dehydrogenase.


ensembl_gene_id: UJ101_00115
symbol: APD05668.1
gene_biotype: protein_coding
description:
  3-oxo-glucose-6-phosphate:glutamate aminotransferase; Involved in the biosynthesis of kanosamine (3-amino-3- deoxy-D-glucose), which is known to have antibiotic and antifungal properties, and to be a precursor of the antibiotic neotrehalosadiamine (3,3'-diamino-3,3'-dideoxy-alpha,beta- trehalose (NTD)). Catalyzes the reversible pyridoxal phosphate- dependent transamination of 3-dehydro-alpha-D-glucose 6-phosphate to form alpha-D-kanosamine-6-phosphate. It can only use alpha- anomer and glutamate is the only amino donor; Belongs to the DegT/DnrJ/EryC1 family; KEGG: csc:Csac_1802 UJ101;  [...]


ensembl_gene_id: UJ101_00116
symbol: manB
gene_biotype: protein_coding
description:
  Phosphomannomutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family; KEGG: bth:BT_3950 phosphomannomutase.


ensembl_gene_id: UJ101_00119
symbol: rimO
gene_biotype: protein_coding
description:
  [Ribosomal protein S12] (aspartate(89)-C(3))-methylthiotransferase; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.


ensembl_gene_id: UJ101_00120
symbol: gshB|GSS
gene_biotype: protein_coding
description:
  Glutathione synthase; Belongs to the RimK family; Contains 1 ATP-grasp domain; KEGG: swd:Swoo_0914 glutathione synthase.


ensembl_gene_id: UJ101_00125
symbol: metX
gene_biotype: protein_coding
description:
  Homoserine O-acetyltransferase; Involved in the methionine biosynthesis. Catalyzes the transfer of the acetyl group from acetyl-CoA to the hydroxyl group of L-homoserine to yield O-acetyl-L-homoserine; Belongs to the AB hydrolase superfamily. HTA family; KEGG: fbr:FBFL15_0979 homoserine O-acetyltransferase.


ensembl_gene_id: UJ101_00128
symbol: treX|glgX
gene_biotype: protein_coding
description:
  Isoamylase 1, chloroplastic; Involved in the trimming of pre-amylopectin chains. Accelerates the crystallization of nascent amylopectin molecules during starch synthesis. ISA1 and ISA2 work exclusively together as a multimeric holoenzyme. ISA1-ISA2 removes preferentially branches that are very close to other branches; Belongs to the glycosyl hydrolase 13 family; KEGG: geb:GM18_0718 glycogen operon protein; Glycosidases, i.e. enzymes hydrolyzing O- and S-glycosyl compounds.


ensembl_gene_id: UJ101_00129
symbol: APD05682.1
gene_biotype: protein_coding
description:
  ABC-2 type transport system ATP-binding protein; Belongs to the ABC transporter superfamily. ABCA family; Contains 2 ABC transporter domains.


ensembl_gene_id: UJ101_00130
symbol: rplM
gene_biotype: protein_coding
description:
  50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.


ensembl_gene_id: UJ101_00133
symbol: tsf
gene_biotype: protein_coding
description:
  Elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.


ensembl_gene_id: UJ101_00135
symbol: waaF|rfaF
gene_biotype: protein_coding
description:
  Lipopolysaccharide heptosyltransferase III; KEGG: dvu:DVU0998 heptosyltransferase II; Glycosyltransferases.


ensembl_gene_id: UJ101_00136
symbol: waaE|kdtX
gene_biotype: protein_coding
description:
  Belongs to the glycosyltransferase 2 family. WaaE/KdtX subfamily; KEGG: eta:ETA_00710 (heptosyl)LPS beta-1,4-glucosyltransferase; Hexosyltransferases.


ensembl_gene_id: UJ101_00139
symbol: APD05692.1
gene_biotype: protein_coding
description:
  Belongs to the glycosyltransferase group 1 family. Glycosyltransferase 4 subfamily; KEGG: lsl:LSL_0982 UJ101; Hexosyltransferases.


ensembl_gene_id: UJ101_00140
symbol: APD05693.1
gene_biotype: protein_coding
description:
  Rhamnosyltransferase involved in lipopolysaccharide biosynthesis; Belongs to the glycosyltransferase 2 family.


ensembl_gene_id: UJ101_00141
symbol: rfbC|rmlC
gene_biotype: protein_coding
description:
  dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.


ensembl_gene_id: UJ101_00143
symbol: lpxB
gene_biotype: protein_coding
description:
  lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell; In the C-terminal sectio; belongs to the LpxB family; KEGG: chp:CPSIT_0840 lipid-A-disaccharide synthase.


ensembl_gene_id: UJ101_00144
symbol: APD05697.1
gene_biotype: protein_coding
description:
  Dolichyl-phosphate beta-D-mannosyltransferase; Belongs to the glycosyltransferase 2 family. GtrB subfamily; KEGG: bae:BATR1942_04125 dolichol-phosphate mannosyltransferase.


ensembl_gene_id: UJ101_00145
symbol: UGDH|ugd
gene_biotype: protein_coding
description:
  Catalyzes the conversion of UDP-glucose into UDP- glucuronate, one of the precursors of teichuronic acid. Belongs to the UDP-glucose/GDP-mannose dehydrogenase family; KEGG: xfa:XF1606 UDPglucose 6-dehydrogenase.


ensembl_gene_id: UJ101_00146
symbol: APD05699.1
gene_biotype: protein_coding
description:
  UDP-glucuronate 4-epimerase; Involved in the synthesis of the negatively charged monosaccharide that forms the backbone of pectic cell wall components; Belongs to the NAD(P)-dependent epimerase/dehydratase family; KEGG: pmr:PMI1489 UDP-glucuronate 4-epimerase.


ensembl_gene_id: UJ101_00147
symbol: APD05700.1
gene_biotype: protein_coding
description:
  RNA polymerase sigma factor RpoS; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: UJ101_00148
symbol: APD05701.1
gene_biotype: protein_coding
description:
  Methionine gamma-lyase; Catalyzes the first committed step of methionine (Met) biosynthesis. Catalyzes the formation of L-cystathionine from homoserine esters and L-cysteine, via a gamma-replacement reaction. Substrate preference for cystathionine synthesis is O- phospho-L-homoserine (OPH) > O(4)-succinyl-L-homoserine (OSH) >> O-acetyl-L-homoserine (OAH). Is able, at extremely low rate, to catalyze a gamma-elimination of OPH in the absence of cysteine to produce inorganic phosphate (Pi), 2-oxobutanoate and ammonia; Belongs to the trans-sulfuration enzymes family; KEGG: setc:CFSAN001921 [...]


ensembl_gene_id: UJ101_00154
symbol: npdA
gene_biotype: protein_coding
description:
  NAD-dependent protein deacylase; NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form; Belongs to the sirtuin family. Class III subfamily; Contains 1 deacetylase sirtuin-type domain; KEGG: amac:MASE_09905 NAD-dependent deacetylase; In linear amides.


ensembl_gene_id: UJ101_00157
symbol: trpE
gene_biotype: protein_coding
description:
  Anthranilate synthase; Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of am [...]


ensembl_gene_id: UJ101_00158
symbol: trpG
gene_biotype: protein_coding
description:
  Anthranilate synthase; Part of a heterodimeric complex that catalyzes the two- step biosynthesis of 4-amino-4-deoxychorismate (ADC), a precursor of p-aminobenzoate (PABA) and tetrahydrofolate. In the first step, a glutamine amidotransferase (PabA) generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by aminodeoxychorismate synthase (PabB) to produce ADC. PabA converts glutamine into glutamate only in the presence of stoichiometric amounts of PabB (By similarity); Contains 1 glutamine amidotransferase type-1 domain; KEGG: pli:PLF_246 anthra [...]


ensembl_gene_id: UJ101_00162
symbol: fabK
gene_biotype: protein_coding
description:
  Enoyl-[acyl-carrier-protein] reductase (NADH); Catalyzes the oxidation of alkyl nitronates to produce the corresponding carbonyl compounds and nitrites; Belongs to the nitronate monooxygenase family; KEGG: phe:Phep_3844 enoyl-(acyl-carrier protein) reductase II.


ensembl_gene_id: UJ101_00164
symbol: argD
gene_biotype: protein_coding
description:
  Acetylornithine transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily; KEGG: gfo:GFO_0771 acetylornithine aminotransferase.


ensembl_gene_id: UJ101_00166
symbol: APD05719.1
gene_biotype: protein_coding
description:
  Ferric uptake regulation protein; Acts as a global negative controlling element, employing Fe(2+) as a cofactor to bind the operator of the repressed genes; Belongs to the Fur family.


ensembl_gene_id: UJ101_00167
symbol: fhs
gene_biotype: protein_coding
description:
  Belongs to the formate--tetrahydrofolate ligase family; KEGG: faa:HMPREF0389_01605 formate--tetrahydrofolate ligase.


ensembl_gene_id: UJ101_00168
symbol: relA
gene_biotype: protein_coding
description:
  GTP diphosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.


ensembl_gene_id: UJ101_00169
symbol: DARS|aspS
gene_biotype: protein_coding
description:
  aspartate--tRNA ligase; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor end of tRNA(Asp). Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.


ensembl_gene_id: UJ101_00170
symbol: deaD|cshA
gene_biotype: protein_coding
description:
  ATP-dependent RNA helicase which is a subunit of the eIF4F complex involved in cap recognition and is required for mRNA binding to ribosome. In the current model of translation initiation, eIF4A unwinds RNA secondary structures in the 5'-UTR of mRNAs which is necessary to allow efficient binding of the small ribosomal subunit, and subsequent scanning for the initiator codon (By similarity); Belongs to the DEAD box helicase family. eIF4A subfamily; Contains 1 helicase ATP-binding domain; Contains 1 helicase C-terminal domain; KEGG: vvu:VV2_0147 ATP-dependent RNA helicase DeaD.


ensembl_gene_id: UJ101_00180
symbol: pepO
gene_biotype: protein_coding
description:
  Endothelin-converting enzyme; Converts big endothelin-1 to endothelin-1. Also involved in the processing of various neuroendocrine peptides, including neurotensin, angiotensin I, substance P, proenkephalin-derived peptides, and prodynorphin-derived peptides. May limit beta- amyloid peptide accumulation in brain. May also have methyltransferase activity. In the N-terminal sectio; belongs to the methyltransferase superfamily; In the C-terminal sectio; belongs to the peptidase M13 family; KEGG: pah:Poras_0079 putative endopeptidase; Metalloendopeptidases.


ensembl_gene_id: UJ101_00182
symbol: APD05735.1
gene_biotype: protein_coding
description:
  Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family; Contains 1 ABC transporter domain.


ensembl_gene_id: UJ101_00183
symbol: pycA
gene_biotype: protein_coding
description:
  Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.


ensembl_gene_id: UJ101_00184
symbol: APEH
gene_biotype: protein_coding
description:
  Acylaminoacyl-peptidase; Exopeptidase that catalyzes the removal of dipeptide units (NH2-P2-P1- or -P1'-P2'-COOH) from the free amino or carboxy termini. Prefers substrates composed of bulky, hydrophobic amino acids at P1 and P1' positions. Has endopeptidase activity on N- terminally blocked peptide derivatives which contain aromatic amino acid residue at the P1 position. Exopeptidase activity is much higher than its endopeptidase activity; Belongs to the peptidase S9 family; KEGG: pha:PSHAa1986 acylaminoacyl-peptidase.


ensembl_gene_id: UJ101_00190
symbol: fabG
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: UJ101_00191
symbol: GAPDH|gapA
gene_biotype: protein_coding
description:
  Belongs to the glyceraldehyde-3-phosphate dehydrogenase family; KEGG: lan:Lacal_0011 glyceraldehyde 3-phosphate dehydrogenase.


ensembl_gene_id: UJ101_00192
symbol: pcm
gene_biotype: protein_coding
description:
  protein-L-isoaspartate(D-aspartate) O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins.


ensembl_gene_id: UJ101_00194
symbol: priA
gene_biotype: protein_coding
description:
  Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.


ensembl_gene_id: UJ101_00201
symbol: ACADS|bcd
gene_biotype: protein_coding
description:
  Short-chain acyl-CoA dehydrogenase; Involved in the degradation of long-chain fatty acids. Belongs to the acyl-CoA dehydrogenase family; KEGG: eat:EAT1b_0815 butyryl-CoA dehydrogenase.


ensembl_gene_id: UJ101_00202
symbol: fadA|fadI
gene_biotype: protein_coding
description:
  acetyl-CoA C-acyltransferase; Involved in the degradation of long-chain fatty acids. Belongs to the thiolase family; KEGG: gfo:GFO_1045 acetyl-CoA acyltransferase.


ensembl_gene_id: UJ101_00203
symbol: fadN
gene_biotype: protein_coding
description:
  3-hydroxyacyl-CoA dehydrogenase; Involved in the degradation of long-chain fatty acids. Belongs to the 3-hydroxyacyl-CoA dehydrogenase family; KEGG: rxy:Rxyl_2057 3-hydroxyacyl-CoA dehydrogenase.


ensembl_gene_id: UJ101_00208
symbol: aceA
gene_biotype: protein_coding
description:
  Isocitrate lyase; Involved in the metabolic adaptation in response to environmental changes. Catalyzes the reversible formation of succinate and glyoxylate from isocitrate, a key step of the glyoxylate cycle, which operates as an anaplerotic route for replenishing the tricarboxylic acid cycle during growth on fatty acid substrates; Belongs to the isocitrate lyase/PEP mutase superfamily. Isocitrate lyase family; KEGG: lan:Lacal_0195 isocitrate lyase.


ensembl_gene_id: UJ101_00211
symbol: hsdM
gene_biotype: protein_coding
description:
  Site-specific DNA-methyltransferase (adenine-specific); KEGG: hcm:HCD_07765 type I restriction enzyme M protein.


ensembl_gene_id: UJ101_00212
symbol: rdgB
gene_biotype: protein_coding
description:
  XTP/dITP diphosphatase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.


ensembl_gene_id: UJ101_00214
symbol: rlmH
gene_biotype: protein_coding
description:
  23S rRNA (pseudouridine(1915)-N(3))-methyltransferase; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.


ensembl_gene_id: UJ101_00216
symbol: APD05769.1
gene_biotype: protein_coding
description:
  Potassium voltage-gated channel subfamily A member; Mediates voltage-dependent potassium ion permeability of excitable membranes. Assuming opened or closed conformations in response to the voltage difference across the membrane, the protein forms a potassium-selective channel through which potassium ions may pass in accordance with their electrochemical gradient. The channel activity is up-regulated by cAMP (By similarity); Belongs to the potassium channel family. A (Shaker) (TC 1.A.1.2) subfamily. Kv1.8/KCNA10 sub-subfamily.


ensembl_gene_id: UJ101_00217
symbol: APD05770.1
gene_biotype: protein_coding
description:
  Epimerase family protein SDR39U1; Putative NADP-dependent oxidoreductase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. SDR39U1 subfamily.


ensembl_gene_id: UJ101_00218
symbol: APD05771.1
gene_biotype: protein_coding
description:
  Belongs to the ABC transporter superfamily. ABCF family. EF3 (TC 3.A.1.121) subfamily; Contains 2 ABC transporter domains.


ensembl_gene_id: UJ101_00219
symbol: MMAB|pduO
gene_biotype: protein_coding
description:
  cob(I)yrinic acid a,c-diamide adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family; KEGG: bex:A11Q_1516 cob(I)alamin adenosyltransferase.


ensembl_gene_id: UJ101_00222
symbol: norB
gene_biotype: protein_coding
description:
  Nitric-oxide reductase (cytochrome c); Component of the anaerobic respiratory chain that transforms nitrate to dinitrogen (denitrification). NorB is the catalytic subunit of the enzyme complex. Shows proton pump activity across the membrane in denitrifying bacterial cells. The mononitrogen reduction is probably coupled to electron transport phosphorylation (By similarity); Belongs to the heme-copper respiratory oxidase family; KEGG: cao:Celal_3930 nitric oxide reductase subunit B.


ensembl_gene_id: UJ101_00231
symbol: APD05783.1
gene_biotype: protein_coding
description:
  Beta-lactamase; Can hydrolyze carbapenem compounds. Belongs to the metallo-beta-lactamase superfamily. Class-B beta-lactamase family; KEGG: csr:Cspa_c21330 metallo-beta-lactamase class B.


ensembl_gene_id: UJ101_00234
symbol: APD05786.1
gene_biotype: protein_coding
description:
  Hemin import ATP-binding protein HmuV; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Heme (hemin) importer (TC 3.A.1.14.5) family; Contains 1 ABC transporter domain.


ensembl_gene_id: UJ101_00235
symbol: APD05787.1
gene_biotype: protein_coding
description:
  Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Involved in the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: UJ101_00236
symbol: APD05788.1
gene_biotype: protein_coding
description:
  Inhibits the initiation of sporulation, Spo0J antagonizes this inhibition. Soj ultimately inhibits the activation (phosphorylation) of Spo0A. It is not required for chromosome partitioning (By similarity); Belongs to the ParA family.


ensembl_gene_id: UJ101_00237
symbol: APD05789.1
gene_biotype: protein_coding
description:
  Putative chromosome-partitioning protein ParB; Involved in chromosome partition. Localize to both poles of the predivisional cell following completion of DNA replication. Binds to the DNA origin of replication (By similarity); Belongs to the ParB family.


ensembl_gene_id: UJ101_00239
symbol: dapB
gene_biotype: protein_coding
description:
  4-hydroxy-tetrahydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.


ensembl_gene_id: UJ101_00242
symbol: K14645
gene_biotype: protein_coding
description:
  Halolysin; Probable secreted halophilic serine protease showing proteolytic activity toward the protease general substrate azocasein; Belongs to the peptidase S8 family; Contains 1 peptidase S8 domain; KEGG: hal:VNG2573G serine protease; Serine endopeptidases.


ensembl_gene_id: UJ101_00243
symbol: APD05795.1
gene_biotype: protein_coding
description:
  RNA helicase; An ATP-dependent bidirectional RNA helicase with RNA- dependent ATPase activit; does not unwind dsDNA, uses only (d)ATP. Also has ATP-dependent RNA annealing activit; concurrent annealing and helicase activity promote strand-exchange activity. In vitro has low helicase processivity, annealing processivity is probably higher. Required for correct cold adaptation, probably by aiding translation of mRNAs required for photosynthesis and electron transport. Probably regulates the cold- shock-inducible expression of the GroESL chaperones. May partially regulate its own expressi [...]


ensembl_gene_id: UJ101_00245
symbol: APD05797.1
gene_biotype: protein_coding
description:
  methylcrotonoyl-CoA carboxylase; Carboxyltransferase subunit of the 3-methylcrotonyl-CoA carboxylase, an enzyme that catalyzes the conversion of 3- methylcrotonyl-CoA to 3-methylglutaconyl-CoA, a critical step for leucine and isovaleric acid catabolism; Belongs to the AccD/PCCB family; Contains 1 carboxyltransferase domain; KEGG: stax:MC45_05315 3-methylcrotonyl-CoA carboxylase beta subunit.


ensembl_gene_id: UJ101_00248
symbol: sir
gene_biotype: protein_coding
description:
  Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family; KEGG: cpi:Cpin_6617 sulfite reductase (ferredoxin).


ensembl_gene_id: UJ101_00249
symbol: cysG
gene_biotype: protein_coding
description:
  uroporphyrinogen-III C-methyltransferase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme; In the N-terminal sectio; belongs to the precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase family; In the C-terminal sectio; belongs to the precorrin methyltransferase family; KEGG: svl:Strvi_2979 uroporphy [...]


ensembl_gene_id: UJ101_00250
symbol: MET8
gene_biotype: protein_coding
description:
  Precorrin-2 dehydrogenase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme; In the N-terminal sectio; belongs to the precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase family; In the C-terminal sectio; belongs to the precorrin methyltransferase family; KEGG: cmr:Cycma_1049 precorrin-2 dehydrogenas [...]


ensembl_gene_id: UJ101_00251
symbol: trxB
gene_biotype: protein_coding
description:
  Belongs to the ferredoxin--NADP reductase type 2 family; KEGG: cbw:RR42_m1284 thioredoxin reductase (NADPH).


ensembl_gene_id: UJ101_00252
symbol: APD05804.1
gene_biotype: protein_coding
description:
  Adrenodoxin like protein, mitochondrial; Required for Fe-S cluster incorporation into mitochondrial and cytosolic apoproteins. May be part of a novel electron transport chain; Belongs to the adrenodoxin/putidaredoxin family; Contains 1 2Fe-2S ferredoxin-type domain.


ensembl_gene_id: UJ101_00254
symbol: APD05806.1
gene_biotype: protein_coding
description:
  H(+)/sulfate cotransporter that may play a role in the regulation of sulfate assimilation; Belongs to the SLC26A/SulP transporter (TC 2.A.53) family; Contains 1 STAS domain.


ensembl_gene_id: UJ101_00256
symbol: APD05808.1
gene_biotype: protein_coding
description:
  Acetylornithine transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily; KEGG: mxa:MXAN_3014 acetylornithine/N-succinyldiaminopimelate aminotransferase.


ensembl_gene_id: UJ101_00257
symbol: ribD
gene_biotype: protein_coding
description:
  Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.


ensembl_gene_id: UJ101_00259
symbol: ybgC
gene_biotype: protein_coding
description:
  Has acyl-CoA thioesterase activity; Belongs to the 4-hydroxybenzoyl-CoA thioesterase family; KEGG: eac:EAL2_808p00340 acyl-CoA thioester hydrolase; Thiolester hydrolases.


ensembl_gene_id: UJ101_00260
symbol: dnaA
gene_biotype: protein_coding
description:
  Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.


ensembl_gene_id: UJ101_00261
symbol: APD05813.1
gene_biotype: protein_coding
description:
  Protein-tyrosine-phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family; KEGG: van:VAA_01132 protein-tyrosine phosphatase.


ensembl_gene_id: UJ101_00262
symbol: rsmI
gene_biotype: protein_coding
description:
  Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA; Belongs to the methyltransferase superfamily. RsmI family; KEGG: bpe:BP2448 16S rRNA (cytidine1402-2'-O)-methyltransferase.


ensembl_gene_id: UJ101_00263
symbol: yqhD
gene_biotype: protein_coding
description:
  Alcohol dehydrogenase YqhD; NADP-dependent ADH activity; Belongs to the iron-containing alcohol dehydrogenase family; KEGG: esa:ESA_00271 NADP-dependent alcohol dehydrogenase; Acting on the CH-OH group of donors.


ensembl_gene_id: UJ101_00265
symbol: APD05817.1
gene_biotype: protein_coding
description:
  Organic hydroperoxide detoxification protein. Confers increased resistance to tert-butyl hydroperoxide killing (By similarity); Belongs to the OsmC/Ohr family.


ensembl_gene_id: UJ101_00266
symbol: APD05818.1
gene_biotype: protein_coding
description:
  HTH-type transcriptional repressor Bm3R1; Negatively controls the expression of the cytochrome p450BM-3 gene at the transcriptional level. Contains 1 HTH tetR-type DNA-binding domain.


ensembl_gene_id: UJ101_00268
symbol: APD05820.1
gene_biotype: protein_coding
description:
  Spermidine/spermine N(1)-acetyltransferase; Involved in the protection against polyamine toxicity by regulating their concentration. Also could be involved in the negative control of sporulation as well as production of degradative enzymes such as alpha-amylase, levansucrase and alkaline phosphatase. Catalyzes the transfer of an acetyl group from acetyl coenzyme A (AcCoA) to an acceptor substrate and releases both CoA and the acetylated product. It possesses N1- acetyltransferase activity toward polyamine substrates including spermidine, spermine, aminopropylcadaverine, norspermidine,  [...]


ensembl_gene_id: UJ101_00272
symbol: APD05824.1
gene_biotype: protein_coding
description:
  Tryptophan-rich protein TspO; Binds tetrapyrroles and promotes the photooxidative degradation of protoporphyrin IX. Can bind the benzodiazepine receptor agonist PK-11195 (in vitro; this interferes with photooxidative tetrapyrrole degradation. May play a role in the transmembrane transport of tetrapyrroles and similar compounds (By similarity); Belongs to the TspO/BZRP family.


ensembl_gene_id: UJ101_00276
symbol: APD05828.1
gene_biotype: protein_coding
description:
  30S ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence.


ensembl_gene_id: UJ101_00282
symbol: cmk
gene_biotype: protein_coding
description:
  UMP/CMP kinase; Belongs to the cytidylate kinase family. Type 1 subfamily; KEGG: puf:UFO1_2021 cytidylate kinase.


ensembl_gene_id: UJ101_00283
symbol: APD05835.1
gene_biotype: protein_coding
description:
  Undecaprenyl-phosphate glucose phosphotransferase; Involved in the biosynthesis of the exopolysaccharide acetan, a water-soluble polysaccharide involved in production of bacterial cellulose (BC); Belongs to the bacterial sugar transferase family.


ensembl_gene_id: UJ101_00284
symbol: etk-wzc
gene_biotype: protein_coding
description:
  Putative tyrosine-protein kinase EpsB; Probably involved in polymerization and/or export of exopolysaccharide EPS I which functions as a virulence factor. May be involved in an ATP-dependent process in the pathway for EPS I production, possibly export of the trimeric repeat units across the inner membrane or their polymerization. Belongs to the etk/wzc family; KEGG: abr:ABTJ_03764 tyrosine-protein kinase Etk/Wzc; Protein-tyrosine kinases.


ensembl_gene_id: UJ101_00286
symbol: APD05838.1
gene_biotype: protein_coding
description:
  Required for the biosynthesis of type 1 capsular polysaccharide. Belongs to the polysaccharide synthase family.


ensembl_gene_id: UJ101_00287
symbol: epsN
gene_biotype: protein_coding
description:
  Putative pyridoxal phosphate-dependent aminotransferase EpsN; May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles. Belongs to the DegT/DnrJ/EryC1 family; KEGG: jeo:JMA_33930 pyridoxal phosphate-dependent aminotransferase EpsN; Transaminases.


ensembl_gene_id: UJ101_00291
symbol: APD05843.1
gene_biotype: protein_coding
description:
  Glycosyl-1-phosphate transferase that mediates the first step in the biosynthesis of the undecaprenyl-linked heptasaccharide donor in the N-linked protein glycosylation pathway. Catalyzes the linking of uridine 5'- diphosphobacillosamine (UDP-Bac) to undecaprenyl phosphate to create the first membrane-associated intermediate undecaprenylpyrophosphate-linked Bac (Und-PP-Bac); Belongs to the bacterial sugar transferase family.


ensembl_gene_id: UJ101_00295
symbol: APD05847.1
gene_biotype: protein_coding
description:
  Catalyzes the O-acetylation of peptidoglycan (PG), an important mechanism that appears to confer lysozyme resistance and contributes to pathogen persistence in the host; Belongs to the membrane-bound acyltransferase family.


ensembl_gene_id: UJ101_00296
symbol: wecB
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing); Plays a role in the biosynthesis of B-band O antigen for serotype O5. Catalyzes the epimerization of UDP-2,3-diacetamido- 2,3-dideoxy-alpha-D-glucuronic acid (UDP-alpha-D-GlcNAc3NAcA) to UDP-2,3-diacetamido-2,3-dideoxy-alpha-D-mannuronic acid (UDP- alpha-D-ManNAc3NAcA). Exhibits high specificity towards the substrate as UDP-alpha-D-GlcNAc, UDP-alpha-D-GlcNAcA (UDP-2- acetamido-2-deoxy-alpha-D-glucuronic acid) and UDP-alpha-D- GlcNAc3NAc (UDP-2,3-diacetamido-2,3-dideoxy-alpha-D-glucose) cannot act as substrates; Belongs to the UDP-N [...]


ensembl_gene_id: UJ101_00300
symbol: waaG|rfaG
gene_biotype: protein_coding
description:
  Sucrose-phosphate synthase; Plays a major role in photosynthetic sucrose synthesis by catalyzing the rate-limiting step of sucrose biosynthesis from UDP-glucose and fructose- 6-phosphate. Involved in the regulation of carbon partitioning in the leaves of plants. May regulate the synthesis of sucrose and therefore play a major role as a limiting factor in the export of photoassimilates out of the leaf. Plays a role for sucrose availability that is essential for plant growth and fiber elongation. Required for nectar secretion; Belongs to the glycosyltransferase 1 family; KEGG: hmr:Hipma_ [...]


ensembl_gene_id: UJ101_00301
symbol: wecE|rffA
gene_biotype: protein_coding
description:
  dTDP-4-amino-4,6-dideoxygalactose transaminase; May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles. Belongs to the DegT/DnrJ/EryC1 family; KEGG: enr:H650_06020 dTDP-4-amino-4,6-dideoxygalactose transaminase.


ensembl_gene_id: UJ101_00303
symbol: APD05855.1
gene_biotype: protein_coding
description:
  Dolichyl-phosphate beta-D-mannosyltransferase; Involved in O antigen modification. Catalyzes the transfer of the glucose residue from UDP-glucose to a lipid carrier (By similarity); Belongs to the glycosyltransferase 2 family. GtrB subfamily; KEGG: vcx:VAA049_3442 dolichol-phosphate mannosyltransferase.


ensembl_gene_id: UJ101_00304
symbol: rffC|wecD
gene_biotype: protein_coding
description:
  Contains 1 N-acetyltransferase domain; KEGG: pprc:PFLCHA0_c21920 dTDP-4-amino-4,6-dideoxy-D-galactose acyltransferase.


ensembl_gene_id: UJ101_00307
symbol: iolG
gene_biotype: protein_coding
description:
  Inositol 2-dehydrogenase; NADP-dependent D-xylose dehydrogenase involved in the degradation of D-xylose, a major component of hemicelluloses such as xylan. Even if it shows D-xylose dehydrogenase activity, it is not essential for D-xylose degradation; Belongs to the Gfo/Idh/MocA family; KEGG: cme:CYME_CMR475C myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase.


ensembl_gene_id: UJ101_00309
symbol: tagE
gene_biotype: protein_coding
description:
  Poly(glycerol-phosphate) alpha-glucosyltransferase; Belongs to the glycosyltransferase group 1 family. Glycosyltransferase 4 subfamily; KEGG: sep:SE0332 poly(glycerol-phosphate) alpha-glucosyltransferase.


ensembl_gene_id: UJ101_00310
symbol: APD05862.1
gene_biotype: protein_coding
description:
  Belongs to the glycosyltransferase group 1 family. Glycosyltransferase 4 subfamily; KEGG: lsl:LSL_0989 UJ101; Hexosyltransferases.


ensembl_gene_id: UJ101_00311
symbol: exoO
gene_biotype: protein_coding
description:
  Belongs to the glycosyltransferase 2 family; KEGG: mes:Meso_0647 succinoglycan biosynthesis protein ExoO; Glycosyltransferases.


ensembl_gene_id: UJ101_00315
symbol: neuB
gene_biotype: protein_coding
description:
  N-acetylneuraminate synthase; Catalyzes the fifth step in the biosynthesis of pseudaminic acid, a sialic-acid-like sugar that is used to modify flagellin. Catalyzes the condensation of phosphoenolpyruvate with 2,4-diacetamido-2,4,6-trideoxy-beta-l-altropyranose, forming pseudaminic acid; Belongs to the pseudaminic acid synthase family; Contains 1 AFP-like domain; KEGG: etr:ETAE_1207 N-acetylneuraminate synthase.


ensembl_gene_id: UJ101_00316
symbol: APD05868.1
gene_biotype: protein_coding
description:
  methionyl-tRNA formyltransferase; Modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by: (I) promoting its recognition by IF2 and (II) impairing its binding to EFTu-GTP (By similarity); Belongs to the Fmt family; KEGG: nbv:T478_0187 methionyl-tRNA formyltransferase.


ensembl_gene_id: UJ101_00320
symbol: APD05872.1
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] reductase; Catalyzes the NADPH-dependent reduction of beta- ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis; Belongs to the short-chain dehydrogenases/reductases (SDR) family; KEGG: mta:Moth_0426 3-oxoacyl-(acyl-carrier protein) reductase.


ensembl_gene_id: UJ101_00322
symbol: arnB|pmrH
gene_biotype: protein_coding
description:
  UDP-4-amino-4-deoxy-L-arabinose aminotransferase; Catalyzes the second step in the biosynthesis of pseudaminic acid, a sialic-acid-like sugar that is used to modify flagellin. Uses UDP-2-acetamido-2,6-dideoxy-beta-L-arabino-4- hexulose as substrate producing UDP-4-amino-4,6-dideoxy-beta-L- AltNAc; Belongs to the DegT/DnrJ/EryC1 family; KEGG: rru:Rru_A2746 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase.


ensembl_gene_id: UJ101_00323
symbol: wbpP
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 4-epimerase; Epimerizes UDP-galactose to UDP-glucose; Belongs to the polysaccharide synthase family; KEGG: dti:Desti_1226 UDP-N-acetylglucosamine 4-epimerase.


ensembl_gene_id: UJ101_00324
symbol: wbpO
gene_biotype: protein_coding
description:
  Protein CapL; Required for the biosynthesis of type 1 capsular polysaccharide. Belongs to the UDP-glucose/GDP-mannose dehydrogenase family; KEGG: cnc:CNE_2c00250 UDP-N-acetyl-D-galactosamine dehydrogenase; With NAD(+) or NADP(+) as acceptor.


ensembl_gene_id: UJ101_00325
symbol: cysN
gene_biotype: protein_coding
description:
  Sulfate adenylyltransferase; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.


ensembl_gene_id: UJ101_00326
symbol: cysD
gene_biotype: protein_coding
description:
  Sulfate adenylyltransferase; Belongs to the PAPS reductase family. CysD subfamily; KEGG: buh:BUAMB_400 sulfate adenylyltransferase subunit 2.


ensembl_gene_id: UJ101_00328
symbol: tsaC|rimN|SUA5
gene_biotype: protein_coding
description:
  L-threonylcarbamoyladenylate synthase; Belongs to the SUA5 family; Contains 1 YrdC-like domain; KEGG: cbo:CBO0142 L-threonylcarbamoyladenylate synthase.


ensembl_gene_id: UJ101_00330
symbol: APD05882.1
gene_biotype: protein_coding
description:
  Chitinase; Carbohydrate-binding lectin with a preference for chitin. Has no chitinase activity. May play a role in tissue remodeling and in the capacity of cells to respond to and cope with changes in their environment. Plays a role in T-helper cell type 2 (Th2) inflammatory response and IL-13-induced inflammation, regulating allergen sensitization, inflammatory cell apoptosis, dendritic cell accumulation and M2 macrophage differentiation. Facilitates invasion of pathogenic enteric bacteria into colonic mucosa and lymphoid organs. Mediates activation of AKT1 signaling pathway and subse [...]


ensembl_gene_id: UJ101_00331
symbol: iaaA|ASRGL1
gene_biotype: protein_coding
description:
  Beta-aspartyl-peptidase; Has both L-asparaginase and beta-aspartyl peptidase activity. Does not have aspartylglucosaminidase activity and is inactive toward GlcNAc-L-Asn. Likewise, has no activity toward glutamine (By similarity); Belongs to the Ntn-hydrolases family; KEGG: mtt:Ftrac_1373 beta-aspartyl-peptidase (threonine type).


ensembl_gene_id: UJ101_00332
symbol: purB|ADSL
gene_biotype: protein_coding
description:
  Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily; KEGG: ipo:Ilyop_0196 adenylosuccinate lyase.


ensembl_gene_id: UJ101_00334
symbol: APD05886.1
gene_biotype: protein_coding
description:
  Molybdate-binding periplasmic protein; Involved in the transport of molybdenum into the cell. Belongs to the bacterial solute-binding protein ModA family.


ensembl_gene_id: UJ101_00336
symbol: APD05888.1
gene_biotype: protein_coding
description:
  Putative molybdenum transport system permease protein YvgM; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: UJ101_00337
symbol: modC
gene_biotype: protein_coding
description:
  Molybdate-transporting ATPase; Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Molybdate importer (TC 3.A.1.8) family; Contains 1 ABC transporter domain; KEGG: plt:Plut_1712 molybdate transport system ATP-binding protein.


ensembl_gene_id: UJ101_00339
symbol: APD05891.1
gene_biotype: protein_coding
description:
  Protein HelA; Presumed to function with HelC and HelB in efflux of an unidentified substrate. Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: UJ101_00340
symbol: APD05892.1
gene_biotype: protein_coding
description:
  Nickel and cobalt resistance protein CnrB; The products of the genes cnrA, cnrB, and cnrC are likely to form a membrane-bound protein complex catalyzing an energy-dependent efflux of Ni(2+) and Co(2+). The mechanism of action of the CnrCBA complex may be that of a proton/cation antiporter. Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: UJ101_00342
symbol: APD05894.1
gene_biotype: protein_coding
description:
  Transport of L-fucose into the cell. Belongs to the major facilitator superfamily. FHS transporter (TC 2.A.1.7) family.


ensembl_gene_id: UJ101_00345
symbol: APD05897.1
gene_biotype: protein_coding
description:
  Putative sodium-dependent multivitamin transporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.


ensembl_gene_id: UJ101_00346
symbol: recR
gene_biotype: protein_coding
description:
  Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.


ensembl_gene_id: UJ101_00350
symbol: DPO5D|umuD
gene_biotype: protein_coding
description:
  Protein MucA; Involved in UV protection and mutation. Belongs to the peptidase S24 family; KEGG: raa:Q7S_08905 DNA polymerase V; Serine endopeptidases.


ensembl_gene_id: UJ101_00351
symbol: APD05903.1
gene_biotype: protein_coding
description:
  Protein ImpB; Involved in UV protection and mutation. Belongs to the DNA polymerase type-Y family; Contains 1 umuC domain.


ensembl_gene_id: UJ101_00359
symbol: APD05908.1
gene_biotype: protein_coding
description:
  Regulatory protein; Activator of asnA transcriptio; autogenous regulator of its own transcriptio; and repressor of the expression of gidA at a post-transcriptional level; Contains 1 HTH asnC-type DNA-binding domain.


ensembl_gene_id: UJ101_00361
symbol: KAE1|tsaD|QRI7
gene_biotype: protein_coding
description:
  N(6)-L-threonylcarbamoyladenine synthase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.


ensembl_gene_id: UJ101_00362
symbol: rsmE
gene_biotype: protein_coding
description:
  16S rRNA (uracil(1498)-N(3))-methyltransferase; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.


ensembl_gene_id: UJ101_00363
symbol: APD05912.1
gene_biotype: protein_coding
description:
  Putative tRNA/rRNA methyltransferase YsgA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: UJ101_00365
symbol: FBA|fbaA
gene_biotype: protein_coding
description:
  Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family.


ensembl_gene_id: UJ101_00371
symbol: cynT|can
gene_biotype: protein_coding
description:
  Carbonate dehydratase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.


ensembl_gene_id: UJ101_00373
symbol: BCP|PRXQ|DOT5
gene_biotype: protein_coding
description:
  Peroxiredoxin; Belongs to the AhpC/TSA family; Contains 1 thioredoxin domain; KEGG: syne:Syn6312_1076 peroxiredoxin Q/BCP.


ensembl_gene_id: UJ101_00375
symbol: APD05924.1
gene_biotype: protein_coding
description:
  Peroxiredoxin; Belongs to the AhpC/TSA family; Contains 1 thioredoxin domain; KEGG: son:SO_1877 peroxiredoxin Q/BCP.


ensembl_gene_id: UJ101_00381
symbol: rpe|RPE
gene_biotype: protein_coding
description:
  Ribulose-phosphate 3-epimerase; Catalyzes the reversible epimerization of D-ribulose 5- phosphate to D-xylulose 5-phosphate; Belongs to the ribulose-phosphate 3-epimerase family; KEGG: bbw:BDW_09955 ribulose-phosphate 3-epimerase.


ensembl_gene_id: UJ101_00383
symbol: bioD
gene_biotype: protein_coding
description:
  Dethiobiotin synthase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring.


ensembl_gene_id: UJ101_00385
symbol: bioF
gene_biotype: protein_coding
description:
  8-amino-7-oxononanoate synthase; Catalyzes the decarboxylative condensation of pimeloyl- [acyl-carrier protein] and L-alanine to produce 8-amino-7- oxononanoate (AON), [acyl-carrier protein], and carbon dioxide; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. BioF subfamily; KEGG: fte:Fluta_2555 8-amino-7-oxononanoate synthase.


ensembl_gene_id: UJ101_00387
symbol: APD05935.1
gene_biotype: protein_coding
description:
  Putative phospholipid import ATP-binding protein MlaF; Part of the ABC transporter complex MlaFEDB that actively prevents phospholipid accumulation at the cell surface. Probably maintains lipid asymmetry in the outer membrane by retrograde trafficking of phospholipids from the outer membrane to the inner membrane. Probably responsible for energy coupling to the transport system (By similarity); Belongs to the ABC transporter superfamily. MlaF family; Contains 1 ABC transporter domain.


ensembl_gene_id: UJ101_00392
symbol: pepD
gene_biotype: protein_coding
description:
  Cytosol non-specific dipeptidase; Dipeptidase with broad substrate specificity. Requires dipeptide substrates with an unblocked N-terminus and the amino group in the alpha or beta position. Non-protein amino acids and proline are not accepted in the C-terminal position, whereas some dipeptide amides and formyl amino acids are hydrolyzed. Also shows cysteinylglycinase activity, which is sufficient for E.coli to utilize cysteinylglycine as a cysteine source; Belongs to the peptidase M20C family; KEGG: apr:Apre_0316 dipeptidase D; Dipeptidases.


ensembl_gene_id: UJ101_00397
symbol: glyA|SHMT
gene_biotype: protein_coding
description:
  Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.


ensembl_gene_id: UJ101_00399
symbol: DLD|lpd|pdhD
gene_biotype: protein_coding
description:
  The branched-chain alpha-keto dehydrogenase complex catalyzes the overall conversion of alpha-keto acids to acyl-CoA and CO(2). It contains multiple copies of 3 enzymatic components: branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltransferase (E2) and lipoamide dehydrogenase (E3). Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family; KEGG: pfo:Pfl01_5671 dihydrolipoamide dehydrogenase.


ensembl_gene_id: UJ101_00401
symbol: pqqL
gene_biotype: protein_coding
description:
  Putative zinc protease; Belongs to the peptidase M16 family; KEGG: mmr:Mmar10_2615 zinc protease; Metalloendopeptidases.


ensembl_gene_id: UJ101_00403
symbol: APD05950.1
gene_biotype: protein_coding
description:
  Serine-type D-Ala-D-Ala carboxypeptidase; Its precise function is unknown. Has no penicillin- binding activity and is not involved in methicillin resistance; KEGG: riv:Riv7116_5464 D-alanyl-D-alanine carboxypeptidase.


ensembl_gene_id: UJ101_00404
symbol: patB|malY
gene_biotype: protein_coding
description:
  Catalyzes the transformation of cystathionine to homocysteine; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. MalY/PatB cystathionine beta-lyase subfamily; KEGG: sub:SUB0427 cystathione beta-lyase.


ensembl_gene_id: UJ101_00407
symbol: GBA|srfJ
gene_biotype: protein_coding
description:
  Glucosylceramidase; Belongs to the glycosyl hydrolase 30 family; KEGG: ptq:P700755_003223 glucosylceramidase.


ensembl_gene_id: UJ101_00410
symbol: ina
gene_biotype: protein_coding
description:
  Uncharacterized protein; Contains 5 PKD domains; KEGG: saz:Sama_3624 immune inhibitor A; Metalloendopeptidases.


ensembl_gene_id: UJ101_00411
symbol: NEU1
gene_biotype: protein_coding
description:
  Exo-alpha-sialidase; Binds to beta-1,3-glucan. May play a role in recognition of microorganisms and in activation of the prophenoloxidase cascade; Belongs to the glycosyl hydrolase 16 family; Contains 1 GH16 (glycosyl hydrolase family 16) domain; KEGG: seq:SZO_05310 sialidase-1.


ensembl_gene_id: UJ101_00418
symbol: APD05965.1
gene_biotype: protein_coding
description:
  Glucose transport protein; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.


ensembl_gene_id: UJ101_00419
symbol: APD05966.1
gene_biotype: protein_coding
description:
  Licheninase; Shows activity on lichenan, beta-glucan and laminarin but not on CMC cellulose or xylan. Belongs to the glycosyl hydrolase 16 family; Contains 1 GH16 (glycosyl hydrolase family 16) domain; KEGG: cps:CPS_3723 licheninase.


ensembl_gene_id: UJ101_00421
symbol: APD05968.1
gene_biotype: protein_coding
description:
  tonB-dependent receptor SusC; Mediates transport of starch oligosaccharides from the surface of the outer membrane to the periplasm for subsequent degradation; Belongs to the TonB-dependent receptor family.


ensembl_gene_id: UJ101_00422
symbol: dapD
gene_biotype: protein_coding
description:
  2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; Belongs to the transferase hexapeptide repeat family; KEGG: coc:Coch_1416 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase.


ensembl_gene_id: UJ101_00423
symbol: APD05970.1
gene_biotype: protein_coding
description:
  Elongation factor; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily; Con [...]


ensembl_gene_id: UJ101_00424
symbol: nprB
gene_biotype: protein_coding
description:
  Neutral protease; Belongs to the peptidase M4 family; KEGG: bsu:BSU11100 neutral peptidase B; Metalloendopeptidases.


ensembl_gene_id: UJ101_00427
symbol: DLST|sucB
gene_biotype: protein_coding
description:
  Dihydrolipoyllysine-residue succinyltransferase; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2).


ensembl_gene_id: UJ101_00428
symbol: OGDH|sucA
gene_biotype: protein_coding
description:
  The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2). It contains multiple copies of three enzymatic components: 2- oxoglutarate dehydrogenase (E1), dihydrolipoamide succinyltransferase (E2) and lipoamide dehydrogenase (E3). Belongs to the alpha-ketoglutarate dehydrogenase family; KEGG: gfo:GFO_3083 2-oxoglutarate dehydrogenase E1 component.


ensembl_gene_id: UJ101_00429
symbol: TPP2
gene_biotype: protein_coding
description:
  Tripeptidyl-peptidase II; In the C-terminal sectio; belongs to the ABC transporter superfamily. ABCB family. Multidrug resistance exporter (TC 3.A.1.201) subfamily; In the N-terminal sectio; belongs to the peptidase S8 family; Contains 1 ABC transmembrane type-1 domain; Contains 1 ABC transporter domain; Contains 1 peptidase S8 domain; KEGG: mgl:MGL_0154 tripeptidyl-peptidase II.


ensembl_gene_id: UJ101_00431
symbol: uvrC
gene_biotype: protein_coding
description:
  uvrABC system protein; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.


ensembl_gene_id: UJ101_00433
symbol: ilvE
gene_biotype: protein_coding
description:
  Branched-chain-amino-acid transaminase; Involved in the biosynthesis of p-aminobenzoate (PABA), a precursor of tetrahydrofolate. Converts 4-amino-4- deoxychorismate into 4-aminobenzoate (PABA) and pyruvate (By similarity); Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family; KEGG: lan:Lacal_2147 branched-chain amino acid aminotransferase.


ensembl_gene_id: UJ101_00435
symbol: pdxH|PNPO
gene_biotype: protein_coding
description:
  Pyridoxal 5'-phosphate synthase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP).


ensembl_gene_id: UJ101_00438
symbol: APD05985.1
gene_biotype: protein_coding
description:
  Cyclomaltodextrin glucanotransferase; Neopullulanase that cleaves 1,4-alpha-glucosidic linkages in starch to produce disaccharides or trisaccharides in starch degradation; Belongs to the glycosyl hydrolase 13 family; KEGG: npu:Npun_F0013 cyclomaltodextrin glucanotransferase.


ensembl_gene_id: UJ101_00440
symbol: trpD
gene_biotype: protein_coding
description:
  Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).


ensembl_gene_id: UJ101_00441
symbol: trpC
gene_biotype: protein_coding
description:
  Indole-3-glycerol-phosphate synthase; Belongs to the TrpC family; KEGG: ddh:Desde_3744 indole-3-glycerol phosphate synthase.


ensembl_gene_id: UJ101_00443
symbol: trpF
gene_biotype: protein_coding
description:
  Phosphoribosylanthranilate isomerase; Belongs to the TrpF family; KEGG: mtt:Ftrac_1040 phosphoribosylanthranilate isomerase.


ensembl_gene_id: UJ101_00448
symbol: recG
gene_biotype: protein_coding
description:
  DNA helicase; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.


ensembl_gene_id: UJ101_00450
symbol: APD05997.1
gene_biotype: protein_coding
description:
  Mechanosensitive channel of miniconductance that confers protection against mild hypoosmotic shock. Overexpression confers protection against severe shocks; Belongs to the MscS (TC 1.A.23) family.


ensembl_gene_id: UJ101_00454
symbol: APD06001.1
gene_biotype: protein_coding
description:
  Metalloendopeptidase OMA1, mitochondrial; Metalloprotease that is part of the quality control system in the inner membrane of mitochondria. Following stress conditions that induce loss of mitochondrial membrane potential, mediates cleavage of OPA1 at S1 position, leading to OPA1 inactivation and negative regulation of mitochondrial fusion. May also cleave UQCC3 under these conditions. Its role in mitochondrial quality control is essential for regulating lipid metabolism as well as to maintain body temperature and energy expenditure under cold-stress conditions; Belongs to the peptidase [...]


ensembl_gene_id: UJ101_00456
symbol: metK
gene_biotype: protein_coding
description:
  Methionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.


ensembl_gene_id: UJ101_00460
symbol: rlmB
gene_biotype: protein_coding
description:
  23S rRNA (guanosine(2251)-2'-O)-methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family; KEGG: pdi:BDI_0708 23S rRNA (guanosine2251-2'-O)-methyltransferase.


ensembl_gene_id: UJ101_00463
symbol: APD06010.1
gene_biotype: protein_coding
description:
  Member of the two-component regulatory system YpdA/YpdB involved in carbon control network. Regulates expression of yhjX by binding to its promoter region (By similarity); Contains 1 HTH LytTR-type DNA-binding domain; Contains 1 response regulatory domain.


ensembl_gene_id: UJ101_00464
symbol: yesM
gene_biotype: protein_coding
description:
  Histidine kinase; Member of the two-component regulatory system LytS/LytT that probably regulates genes involved in cell wall metabolism. Contains 1 GAF domain; Contains 1 histidine kinase domain; KEGG: pgm:PGRAT_30365 two-component system, sensor histidine kinase YesM.


ensembl_gene_id: UJ101_00467
symbol: APD06014.1
gene_biotype: protein_coding
description:
  L-glutamate gamma-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family; KEGG: osp:Odosp_1952 1-pyrroline-5-carboxylate dehydrogenase.


ensembl_gene_id: UJ101_00471
symbol: rluB
gene_biotype: protein_coding
description:
  23S rRNA pseudouridine(2605) synthase; Responsible for synthesis of pseudouridine from uracil- 2604 in 23S ribosomal RNA; Belongs to the pseudouridine synthase RsuA family; Contains 1 S4 RNA-binding domain; KEGG: pnu:Pnuc_1230 23S rRNA pseudouridine2605 synthase.


ensembl_gene_id: UJ101_00472
symbol: ruvB
gene_biotype: protein_coding
description:
  DNA helicase; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.


ensembl_gene_id: UJ101_00479
symbol: LARS|leuS
gene_biotype: protein_coding
description:
  leucine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family; KEGG: bmx:BMS_2339 leucyl-tRNA synthetase.


ensembl_gene_id: UJ101_00481
symbol: clpP|CLPP
gene_biotype: protein_coding
description:
  Endopeptidase Clp; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: UJ101_00483
symbol: APD06030.1
gene_biotype: protein_coding
description:
  Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily; Contains 1 PPIase FKBP-type domain.


ensembl_gene_id: UJ101_00485
symbol: kbl|GCAT
gene_biotype: protein_coding
description:
  Glycine C-acetyltransferase; Catalyzes the decarboxylative condensation of pimeloyl- [acyl-carrier protein] and L-alanine to produce 8-amino-7- oxononanoate (AON), [acyl-carrier protein], and carbon dioxide; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. BioF subfamily; KEGG: osp:Odosp_3226 glycine C-acetyltransferase.


ensembl_gene_id: UJ101_00486
symbol: APD06033.1
gene_biotype: protein_coding
description:
  Dehydrogenase/reductase SDR family member 7B; Putative oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family; KEGG: rpe:RPE_2197 UJ101; Oxidoreductases.


ensembl_gene_id: UJ101_00487
symbol: CBS
gene_biotype: protein_coding
description:
  Belongs to the cysteine synthase/cystathionine beta- synthase family; Contains 2 CBS domains; KEGG: ava:Ava_4156 cystathionine beta-synthase.


ensembl_gene_id: UJ101_00488
symbol: APD06035.1
gene_biotype: protein_coding
description:
  Nucleoid-associated protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.


ensembl_gene_id: UJ101_00491
symbol: APD06038.1
gene_biotype: protein_coding
description:
  Putative HTH-type transcriptional regulator YcgK; Contains 1 HTH lysR-type DNA-binding domain; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: UJ101_00492
symbol: APD06039.1
gene_biotype: protein_coding
description:
  Putative 24.6 kDa protein in ccpA 3'region; May be involved in some transport function. Belongs to the MotB family; Contains 1 OmpA-like domain.


ensembl_gene_id: UJ101_00494
symbol: GLDC|gcvP
gene_biotype: protein_coding
description:
  Glycine dehydrogenase (aminomethyl-transferring); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofacto; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family; KEGG: aha:AHA_1720 glycine dehydrogenase.


ensembl_gene_id: UJ101_00496
symbol: glgB
gene_biotype: protein_coding
description:
  1,4-alpha-glucan branching enzyme; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily; KEGG: hym:N008_13880 1,4-alpha-glucan branching enzyme.


ensembl_gene_id: UJ101_00498
symbol: APD06045.1
gene_biotype: protein_coding
description:
  Thrombospondin-1; Adhesive glycoprotein that mediates cell-to-cell and cell-to-matrix interactions. Ligand for CD36 mediating antiangiogenic properties (By similarity). May play a role in dentinogenesis and/or maintenance of dentin and dental pulp. Plays a role in ER stress response, via its interaction with the activating transcription factor 6 alpha (ATF6) which produces adaptive ER stress response factors (By similarity); Belongs to the thrombospondin family; Contains 2 EGF-like domains; Contains 1 laminin G-like domain; Contains 1 TSP C-terminal (TSPC) domain; Contains 3 TSP type-1 [...]


ensembl_gene_id: UJ101_00506
symbol: ncd2|npd
gene_biotype: protein_coding
description:
  Catalyzes the oxidation of alkyl nitronates to produce the corresponding carbonyl compounds and nitrites; Belongs to the nitronate monooxygenase family; KEGG: fco:FCOL_03375 nitronate monooxygenase.


ensembl_gene_id: UJ101_00513
symbol: APD06055.1
gene_biotype: protein_coding
description:
  N-acetyl-alpha-D-glucosaminyl L-malate deacetylase; Involved in bacillithiol (BSH) biosynthesis. Catalyzes the second step of the pathway, the deacetylation of N- acetylglucosaminylmalate (GlcNAc-Mal) to glucosamine malate (GlcN- Mal); Belongs to the PIGL family.


ensembl_gene_id: UJ101_00516
symbol: APD06057.1
gene_biotype: protein_coding
description:
  Outer membrane lipoprotein Blc; Involved in the storage or transport of lipids necessary for membrane maintenance under stressful conditions. Displays a binding preference for lysophospholipids (By similarity); Belongs to the calycin superfamily. Lipocalin family.


ensembl_gene_id: UJ101_00517
symbol: PDHB|pdhB
gene_biotype: protein_coding
description:
  Pyruvate dehydrogenase (acetyl-transferring); The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.


ensembl_gene_id: UJ101_00518
symbol: dapA
gene_biotype: protein_coding
description:
  4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).


ensembl_gene_id: UJ101_00521
symbol: APD06062.1
gene_biotype: protein_coding
description:
  5'-nucleotidase; Hydrolyzes extracellular nucleotides into membrane permeable nucleosides. Exhibits AMP-, NAD-, and NMN-nucleosidase activities; Belongs to the 5'-nucleotidase family; KEGG: doi:FH5T_14195 5'-nucleotidase.


ensembl_gene_id: UJ101_00522
symbol: APD06063.1
gene_biotype: protein_coding
description:
  Nuclease S(1); Hydrolyzes only single-stranded DNA and RNA without apparent specificity for bases during senescence. Endonuclease that recognizes and cleaves all types of mismatches with high efficiency, including heteroduplex double-stranded DNA. Maybe involved in programmed cell death (PCD) and senescence; Belongs to the nuclease type I family; KEGG: xcc:XCC3198 nuclease S1.


ensembl_gene_id: UJ101_00524
symbol: accA
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.


ensembl_gene_id: UJ101_00526
symbol: mutL
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.


ensembl_gene_id: UJ101_00527
symbol: APD06068.1
gene_biotype: protein_coding
description:
  Rhomboid-type serine protease that catalyzes intramembrane proteolysis. Important for normal cell division and sporulation. May act as a glucose exporter; Belongs to the peptidase S54 family; Contains 2 TPR repeats.


ensembl_gene_id: UJ101_00532
symbol: pat
gene_biotype: protein_coding
description:
  Inactivates phosphinothricin (PPT) by transfer of an acetyl group from acetyl CoA. Can also acetylate demethylphosphinothricin but not PTT or glutamate. This enzyme is an effector of phosphinothricin tripeptide (PTT or bialaphos) resistance; Belongs to the acetyltransferase family. PAT/BAR subfamily; Contains 1 N-acetyltransferase domain; KEGG: eha:Ethha_1405 phosphinothricin acetyltransferase.


ensembl_gene_id: UJ101_00533
symbol: ACOT11
gene_biotype: protein_coding
description:
  Has acyl-CoA thioesterase activity towards medium (C12) and long-chain (C18) fatty acyl-CoA substrates. Contains 2 HotDog ACOT-type domains; Contains 1 START domain; KEGG: hsa:26027 acyl-CoA thioesteraes 11; Thiolester hydrolases.


ensembl_gene_id: UJ101_00534
symbol: APD06075.1
gene_biotype: protein_coding
description:
  UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase; Is the initiating enzyme for the synthesis of the exopolysaccharide xanthan. Catalyzes the transfer of the glucose- 1-phosphate moiety from UDP-Glc onto the carrier lipid undecaprenyl phosphate (C55-P), forming a phosphoanhydride bond yielding to glucosyl-pyrophosphoryl-undecaprenol (Glc-PP-C55); Belongs to the bacterial sugar transferase family.


ensembl_gene_id: UJ101_00536
symbol: wcaF
gene_biotype: protein_coding
description:
  Belongs to the transferase hexapeptide repeat family; KEGG: chu:CHU_0907 putative colanic acid biosynthesis acetyltransferase WcaF; Transferring groups other than amino-acyl groups.


ensembl_gene_id: UJ101_00542
symbol: APD06083.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: dto:TOL2_C12540 UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase; Hexosyltransferases.


ensembl_gene_id: UJ101_00543
symbol: TSTA3|fcl
gene_biotype: protein_coding
description:
  GDP-L-fucose synthase; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction.


ensembl_gene_id: UJ101_00544
symbol: gmd|GMDS
gene_biotype: protein_coding
description:
  GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.


ensembl_gene_id: UJ101_00545
symbol: APD06086.1
gene_biotype: protein_coding
description:
  Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.


ensembl_gene_id: UJ101_00546
symbol: APD06087.1
gene_biotype: protein_coding
description:
  D-xylose 1-dehydrogenase (NADP(+)); NADP-dependent D-xylose dehydrogenase involved in the degradation of D-xylose, a major component of hemicelluloses such as xylan. Even if it shows D-xylose dehydrogenase activity, it is not essential for D-xylose degradation; Belongs to the Gfo/Idh/MocA family.


ensembl_gene_id: UJ101_00549
symbol: rfbB|rffG
gene_biotype: protein_coding
description:
  dTDP-glucose 4,6-dehydratase; Catalyzes the dehydration of dTDP-D-glucose to form dTDP-6-deoxy-D-xylo-4-hexulose via a three-step process involving oxidation, dehydration and reduction; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily; KEGG: afe:Lferr_0602 dTDP-glucose 4,6-dehydratase.


ensembl_gene_id: UJ101_00550
symbol: manA|MPI
gene_biotype: protein_coding
description:
  Mannose-6-phosphate isomerase; Seems to be involved in the degradation of glucomannan; Belongs to the mannose-6-phosphate isomerase type 1 family; KEGG: pbt:ING2E5B_0931 mannose-6-phosphate isomerase.


ensembl_gene_id: UJ101_00554
symbol: APD06093.1
gene_biotype: protein_coding
description:
  Bifunctional thioredoxin reductase/thioredoxin; In the N-terminal sectio; belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family; Contains 1 thioredoxin domain.


ensembl_gene_id: UJ101_00555
symbol: DPO3A1|dnaE
gene_biotype: protein_coding
description:
  DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The alpha chain is the DNA polymerase (By similarity); Belongs to the DNA polymerase type-C family. DnaE subfamily; KEGG: phe:Phep_0866 DNA polymerase III subunit alpha.


ensembl_gene_id: UJ101_00559
symbol: rsmB|sun
gene_biotype: protein_coding
description:
  Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family; KEGG: lan:Lacal_1975 16S rRNA (cytosine967-C5)-methyltransferase.


ensembl_gene_id: UJ101_00563
symbol: APD06102.1
gene_biotype: protein_coding
description:
  UPF0001 protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.


ensembl_gene_id: UJ101_00564
symbol: pepN
gene_biotype: protein_coding
description:
  Membrane alanyl aminopeptidase; Involved in the cellular supply of leucine from externally offered leucine-containing dipeptide substrates. Belongs to the peptidase M1 family; KEGG: pko:PKOR_21090 aminopeptidase N.


ensembl_gene_id: UJ101_00568
symbol: IDH1|IDH2|icd
gene_biotype: protein_coding
description:
  Isocitrate dehydrogenase (NADP(+)); May function in the production of NADPH for fatty acid and sterol synthesis. Belongs to the isocitrate and isopropylmalate dehydrogenases family; KEGG: bba:Bd3723 isocitrate dehydrogenase.


ensembl_gene_id: UJ101_00570
symbol: rplS
gene_biotype: protein_coding
description:
  50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.


ensembl_gene_id: UJ101_00573
symbol: APD06112.1
gene_biotype: protein_coding
description:
  Responsible for the transport of sucrose into the cell, with the concomitant uptake of protons (symport system). This transport is both voltage- and energy-dependent. Can also transport other glucosides such as maltose, alpha-phenylglucoside and beta-phenylglucoside. May also transport biotin. Required for normal pollen germination and anthocyanin accumulation induced by sucrose; Belongs to the glycoside-pentoside-hexuronide (GPH) cation symporter transporter (TC 2.A.2.4) family.


ensembl_gene_id: UJ101_00575
symbol: pepP
gene_biotype: protein_coding
description:
  xaa-Pro aminopeptidase; Belongs to the peptidase M24B family; KEGG: sze:AW14_02565 Xaa-Pro aminopeptidase.


ensembl_gene_id: UJ101_00576
symbol: hemC|HMBS
gene_biotype: protein_coding
description:
  Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.


ensembl_gene_id: UJ101_00577
symbol: hemA
gene_biotype: protein_coding
description:
  glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).


ensembl_gene_id: UJ101_00578
symbol: APD06117.1
gene_biotype: protein_coding
description:
  Regulatory protein PchR; Positive activator of the genes for pyochelin and ferripyochelin receptors. Contains 1 HTH araC/xylS-type DNA-binding domain.


ensembl_gene_id: UJ101_00579
symbol: der
gene_biotype: protein_coding
description:
  GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.


ensembl_gene_id: UJ101_00580
symbol: treZ|glgZ
gene_biotype: protein_coding
description:
  4-alpha-D-((1->4)-alpha-D-glucano)trehalose trehalohydrolase; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB (By similarity); In the C-terminal sectio; belongs to the glycosyl hydrolase 13 family. GlgE subfamily; KEGG: cut:CUTER_07220 maltooligosyltrehalose trehalohydrolase.


ensembl_gene_id: UJ101_00581
symbol: amyA|malS
gene_biotype: protein_coding
description:
  Alpha-amylase; Belongs to the glycosyl hydrolase 13 family; Contains 1 CBM20 (carbohydrate binding type-20) domain; Contains 1 IPT/TIG domain; KEGG: gag:Glaag_0458 alpha-amylase.


ensembl_gene_id: UJ101_00590
symbol: APD06129.1
gene_biotype: protein_coding
description:
  Arsenical-resistance protein Acr3; Catalyzes arsenite efflux from the cell; Belongs to the arsenical resistance-3 (ACR3) (TC 2.A.59) family.


ensembl_gene_id: UJ101_00591
symbol: APD06130.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.


ensembl_gene_id: UJ101_00593
symbol: aroC
gene_biotype: protein_coding
description:
  Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.


ensembl_gene_id: UJ101_00594
symbol: scoA
gene_biotype: protein_coding
description:
  Belongs to the 3-oxoacid CoA-transferase subunit A family; KEGG: fps:FP0026 3-oxoacid CoA-transferase subunit A.


ensembl_gene_id: UJ101_00595
symbol: scoB
gene_biotype: protein_coding
description:
  Belongs to the 3-oxoacid CoA-transferase subunit B family; KEGG: ecw:EcE24377A_1669 3-oxoacid CoA-transferase subunit B.


ensembl_gene_id: UJ101_00597
symbol: APD06136.1
gene_biotype: protein_coding
description:
  Putative HTH-type transcriptional regulator YhdI; In the C-terminal sectio; belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family; Contains 1 HTH gntR-type DNA-binding domain.


ensembl_gene_id: UJ101_00599
symbol: coaD|kdtB
gene_biotype: protein_coding
description:
  Pantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.


ensembl_gene_id: UJ101_00600
symbol: ddl
gene_biotype: protein_coding
description:
  D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.


ensembl_gene_id: UJ101_00602
symbol: APD06141.1
gene_biotype: protein_coding
description:
  23S rRNA pseudouridine(1911/1915/1917) synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: UJ101_00604
symbol: APD06143.1
gene_biotype: protein_coding
description:
  Hydrogen peroxide-inducible protein activator; Required for the induction of a regulon of hydrogen peroxide inducible genes such as catalase and glutathione- reductase; Contains 1 HTH lysR-type DNA-binding domain; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: UJ101_00605
symbol: APD06144.1
gene_biotype: protein_coding
description:
  DNA protection during starvation protein; Responsible for protection of cells against peroxide, especially against hydrogen peroxide. Required for survival in host cells. Although it binds iron, it may not contribute to iron storage. The iron-loaded dps has DNA-binding activity; Belongs to the Dps family.


ensembl_gene_id: UJ101_00606
symbol: gidB|rsmG
gene_biotype: protein_coding
description:
  16S rRNA (guanine(527)-N(7))-methyltransferase; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.


ensembl_gene_id: UJ101_00607
symbol: aspB
gene_biotype: protein_coding
description:
  Aspartate transaminase; Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family; KEGG: bth:BT_2415 aspartate aminotransferase.


ensembl_gene_id: UJ101_00608
symbol: fumC
gene_biotype: protein_coding
description:
  Fumarate hydratase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.


ensembl_gene_id: UJ101_00609
symbol: APD06148.1
gene_biotype: protein_coding
description:
  Belongs to the acetyltransferase family; Contains 1 N-acetyltransferase domain; KEGG: bcx:BCA_1942 ribosomal-protein-alanine N-acetyltransferase.


ensembl_gene_id: UJ101_00611
symbol: APD06150.1
gene_biotype: protein_coding
description:
  The electron transfer flavoprotein serves as a specific electron acceptor for other dehydrogenases. It transfers the electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase) (By similarity); Belongs to the ETF beta-subunit/FixA family.


ensembl_gene_id: UJ101_00612
symbol: APD06151.1
gene_biotype: protein_coding
description:
  The electron transfer flavoprotein serves as a specific electron acceptor for other dehydrogenases. It transfers the electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase) (By similarity); Belongs to the ETF alpha-subunit/FixB family.


ensembl_gene_id: UJ101_00613
symbol: pnp|PNPT1
gene_biotype: protein_coding
description:
  Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.


ensembl_gene_id: UJ101_00614
symbol: rpsO
gene_biotype: protein_coding
description:
  30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.


ensembl_gene_id: UJ101_00617
symbol: APD06156.1
gene_biotype: protein_coding
description:
  Could be part of a two-component membrane permease system responsible for amino acid transport under low pH. Involved in acidogenesis, biofilm formation and low-pH survival; Belongs to the UPF0718 family.


ensembl_gene_id: UJ101_00618
symbol: APD06157.1
gene_biotype: protein_coding
description:
  Putative multidrug resistance protein YoeA; Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family.


ensembl_gene_id: UJ101_00620
symbol: DPO1|polA
gene_biotype: protein_coding
description:
  DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.


ensembl_gene_id: UJ101_00623
symbol: pheA2
gene_biotype: protein_coding
description:
  Prephenate dehydratase; Contains 1 ACT domain; Contains 1 chorismate mutase domain; Contains 1 prephenate dehydratase domain; KEGG: asl:Aeqsu_1847 prephenate dehydratase.


ensembl_gene_id: UJ101_00624
symbol: APD06163.1
gene_biotype: protein_coding
description:
  LL-diaminopimelate aminotransferase; Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL-diaminopimelate, a reaction that requires three enzymes in E.coli; Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family. LL-diaminopimelate aminotransferase subfamily; KEGG: chu:CHU_0765 UJ101; Transaminases.


ensembl_gene_id: UJ101_00625
symbol: tyrA2
gene_biotype: protein_coding
description:
  Is competent to function as either prephenate dehydrogenase or as arogenate dehydrogenase. Contains 1 prephenate/arogenate dehydrogenase domain; KEGG: tdn:Suden_0659 prephenate dehydrogenase.


ensembl_gene_id: UJ101_00626
symbol: aroG|aroA
gene_biotype: protein_coding
description:
  3-deoxy-7-phosphoheptulonate synthase; Catalyzes the condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP). Belongs to the class-I DAHP synthase family; KEGG: ssp:SSP1026 3-deoxy-7-phosphoheptulonate synthase / chorismate mutase.


ensembl_gene_id: UJ101_00628
symbol: APD06167.1
gene_biotype: protein_coding
description:
  Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. Extracytoplasmic function (ECF) sigma factors are held in an inactive form by a cognate anti-sigma factor (RsiW for this protein) until released by regulated membrane proteolysis. Sigma-W controls genes involved in transport processes and detoxification; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: UJ101_00631
symbol: mvaA
gene_biotype: protein_coding
description:
  hydroxymethylglutaryl-CoA reductase; P.mevalonii can use mevalonate as sole carbon source. With this enzyme mevalonate is deacetylated to HMG-CoA. Belongs to the HMG-CoA reductase family; KEGG: pom:MED152_06245 hydroxymethylglutaryl-CoA reductase.


ensembl_gene_id: UJ101_00632
symbol: APD06171.1
gene_biotype: protein_coding
description:
  Iron-sulfur cluster repair protein ScdA; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family.


ensembl_gene_id: UJ101_00634
symbol: mdh
gene_biotype: protein_coding
description:
  Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.


ensembl_gene_id: UJ101_00638
symbol: APD06177.1
gene_biotype: protein_coding
description:
  Required for protein transport from the ER to the Golgi complex. Belongs to the VDP/USO1/EDE1 family; Contains 10 ARM repeats.


ensembl_gene_id: UJ101_00639
symbol: xthA
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease III; Belongs to the DNA repair enzymes AP/ExoA family; KEGG: pae:PA5332 exodeoxyribonuclease III.


ensembl_gene_id: UJ101_00646
symbol: adaA
gene_biotype: protein_coding
description:
  HTH-type transcriptional activator Btr; In iron-limited conditions, activates expression of the feuABCybbA operon, which encodes the bacillibactin uptake system. Acts by binding directly to a conserved direct repeat element upstream of the feuA promoter. Activity is increased in the presence of bacillibactin; Contains 1 Fe/B12 periplasmic-binding domain; Contains 1 HTH araC/xylS-type DNA-binding domain; KEGG: bca:BCE_3772 AraC family transcriptional regulator, regulatory protein of adaptative response / methylphosphotriester-DNA alkyltransferase methyltransferase; Methyltransferases.


ensembl_gene_id: UJ101_00650
symbol: APD06189.1
gene_biotype: protein_coding
description:
  Putative uncharacterized oxidoreductase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. Dihydroflavonol-4-reductase subfamily; KEGG: aci:ACIAD0849 UJ101; With NAD(+) or NADP(+) as acceptor.


ensembl_gene_id: UJ101_00651
symbol: APD06190.1
gene_biotype: protein_coding
description:
  HTH-type transcriptional repressor ComR; Represses expression of BhsA/ComC by binding to its promoter region in the absence of copper; Contains 1 HTH tetR-type DNA-binding domain.


ensembl_gene_id: UJ101_00653
symbol: menI
gene_biotype: protein_coding
description:
  1,4-dihydroxy-2-naphthoyl-CoA hydrolase; Belongs to the thioesterase PaaI family; KEGG: dji:CH75_22165 1,4-dihydroxy-2-naphthoyl-CoA hydrolase.


ensembl_gene_id: UJ101_00655
symbol: APD06194.1
gene_biotype: protein_coding
description:
  Chaperone protein ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE. Acts before DnaK, in the processing of protein aggregates. Protein binding stimulates the ATPase activit; ATP hydrolysis unfolds the denatured protein aggregates, which probably helps expose new hydrophobic binding sites on the surface of ClpB-bound aggregates, contributing to the solubilization and refolding of denatured protein aggregates by DnaK (By similarity); Belongs to the ClpA/ClpB family; Contains [...]


ensembl_gene_id: UJ101_00657
symbol: gyrA
gene_biotype: protein_coding
description:
  DNA topoisomerase (ATP-hydrolyzing); A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent [...]


ensembl_gene_id: UJ101_00661
symbol: APD06200.1
gene_biotype: protein_coding
description:
  Multidrug export protein; Part of the tripartite efflux system AcrEF-TolC. Involved in the efflux of indole and organic solvents; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: UJ101_00662
symbol: APD06201.1
gene_biotype: protein_coding
description:
  Cation efflux system protein CusC; Forms pores that allow passive diffusion of cations across the outer membrane. Part of a cation efflux system that mediates resistance to copper and silver (By similarity); Belongs to the outer membrane factor (OMF) (TC 1.B.17) family.


ensembl_gene_id: UJ101_00663
symbol: HEXA_B
gene_biotype: protein_coding
description:
  beta-N-acetylhexosaminidase; Responsible for the degradation of GM2 gangliosides, and a variety of other molecules containing terminal N-acetyl hexosamines, in the brain and other tissues; Belongs to the glycosyl hydrolase 20 family; KEGG: mvs:MVIS_2240 hexosaminidase.


ensembl_gene_id: UJ101_00664
symbol: nagB|GNPDA
gene_biotype: protein_coding
description:
  Glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion; Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. NagB subfamily; KEGG: fjo:Fjoh_2029 glucosamine-6-phosphate deaminase.


ensembl_gene_id: UJ101_00667
symbol: APD06206.1
gene_biotype: protein_coding
description:
  Histidine kinase; Member of the two-component regulatory system LytS/LytT that probably regulates genes involved in cell wall metabolism. Contains 1 GAF domain; Contains 1 histidine kinase domain; KEGG: csb:CLSA_c36400 two-component system, sensor histidine kinase YesM.


ensembl_gene_id: UJ101_00668
symbol: APD06207.1
gene_biotype: protein_coding
description:
  Chemotaxis response regulator protein-glutamate methylesterase; Involved in the modulation of the chemotaxis syste; catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR; Contains 1 cheB-type methylesterase domain; Contains 1 response regulatory domain.


ensembl_gene_id: UJ101_00684
symbol: ARSC1|arsC
gene_biotype: protein_coding
description:
  Arsenate reductase (glutaredoxin); Reduction of arsenate [As(V)] to arsenite [As(III)]. This protein expands the substrate specificity of ArsAB pump which can extrude arsenite and antimonite to allow for arsenate pumping and resistance. Belongs to the ArsC family; KEGG: pva:Pvag_2249 arsenate reductase.


ensembl_gene_id: UJ101_00685
symbol: astD
gene_biotype: protein_coding
description:
  Succinylglutamate-semialdehyde dehydrogenase; Catalyzes the NAD-dependent reduction of succinylglutamate semialdehyde into succinylglutamate; Belongs to the aldehyde dehydrogenase family. AstD subfamily; KEGG: vfm:VFMJ11_2394 succinylglutamic semialdehyde dehydrogenase.


ensembl_gene_id: UJ101_00687
symbol: APD06226.1
gene_biotype: protein_coding
description:
  Signal transduction histidine-protein kinase/phosphatase DegS; Member of the two-component regulatory system DegS/DegU, which plays an important role in the transition growth phase. Acts as both a protein kinase that undergoes autophosphorylation and subsequently transfers the phosphate to DegU, and a protein phosphatase that dephosphorylates phospho-DegU (By similarity); Contains 1 histidine kinase domain; KEGG: gfo:GFO_2634 UJ101; Phosphotransferases with a nitrogenous group as acceptor.


ensembl_gene_id: UJ101_00688
symbol: APD06227.1
gene_biotype: protein_coding
description:
  Chemotaxis response regulator protein-glutamate methylesterase of group 1 operon; Involved in the modulation of the chemotaxis syste; catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR; Contains 1 cheB-type methylesterase domain; Contains 1 response regulatory domain.


ensembl_gene_id: UJ101_00691
symbol: mutS
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.


ensembl_gene_id: UJ101_00692
symbol: APD06230.1
gene_biotype: protein_coding
description:
  Putative tRNA/rRNA methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: UJ101_00693
symbol: APD06231.1
gene_biotype: protein_coding
description:
  Peptidoglycan-associated lipoprotein; Thought to play a role in bacterial envelope integrity. Very strongly associated with the peptidoglycan (By similarity); Belongs to the OmpA family. Pal subfamily; Contains 1 OmpA-like domain.


ensembl_gene_id: UJ101_00694
symbol: APD06232.1
gene_biotype: protein_coding
description:
  Purine-specific deoxyribonuleoside kinase that phosphorylates preferentially deoxyguanosine, as part of the deoxyribonucleotide salvage pathway. Belongs to the DCK/DGK family.


ensembl_gene_id: UJ101_00695
symbol: FOL1
gene_biotype: protein_coding
description:
  Dihydroneopterin aldolase; Belongs to the HPPK family; KEGG: dfa:DFA_08871 dihydroneopterin aldolase / 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase / dihydropteroate synthase.


ensembl_gene_id: UJ101_00696
symbol: sppA
gene_biotype: protein_coding
description:
  Protease; Digests cleaved signal peptides in vitro, its in vivo function is unknown. This activity is necessary to maintain proper secretion of mature proteins across the membrane; Belongs to the peptidase S49 family; KEGG: cph:Cpha266_0556 protease IV; Serine endopeptidases.


ensembl_gene_id: UJ101_00700
symbol: APD06238.1
gene_biotype: protein_coding
description:
  Penicillin-binding protein; Cell wall formatio; PBP-2 is responsible for the determination of the rod shape of the cell. Its synthesize cross- linked peptidoglycan from the lipid intermediates (By similarity); Belongs to the transpeptidase family.


ensembl_gene_id: UJ101_00701
symbol: APD06239.1
gene_biotype: protein_coding
description:
  Putative lipid II flippase FtsW; Essential cell division protein. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane; Belongs to the SEDS family. FtsW subfamily.


ensembl_gene_id: UJ101_00702
symbol: serA|PHGDH
gene_biotype: protein_coding
description:
  Phosphoglycerate dehydrogenase; Involved in the degradation of L-serine via 3- hydroxypyruvate. Catalyzes the non-reversible reduction of 3- hydroxypyruvate to yield D-glycerate; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family; KEGG: orh:Ornrh_0174 D-3-phosphoglycerate dehydrogenase.


ensembl_gene_id: UJ101_00703
symbol: serC|PSAT1
gene_biotype: protein_coding
description:
  Phosphoserine transaminase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily.


ensembl_gene_id: UJ101_00708
symbol: GCDH|gcdH
gene_biotype: protein_coding
description:
  glutaryl-CoA dehydrogenase (ETF); Involved in the degradation of long-chain fatty acids. Belongs to the acyl-CoA dehydrogenase family; KEGG: nko:Niako_4544 glutaryl-CoA dehydrogenase.


ensembl_gene_id: UJ101_00715
symbol: APD06253.1
gene_biotype: protein_coding
description:
  Outer membrane protein; Structural protein that may protect the integrity of the bacterium. Belongs to the OmpA family; Contains 1 OmpA-like domain.


ensembl_gene_id: UJ101_00716
symbol: smpB
gene_biotype: protein_coding
description:
  ssrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...]


ensembl_gene_id: UJ101_00719
symbol: folP
gene_biotype: protein_coding
description:
  Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives.


ensembl_gene_id: UJ101_00722
symbol: APD06260.1
gene_biotype: protein_coding
description:
  Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane; Belongs to the BamD family.


ensembl_gene_id: UJ101_00724
symbol: coaBC|dfp
gene_biotype: protein_coding
description:
  Phosphopantothenoylcysteine decarboxylase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.


ensembl_gene_id: UJ101_00732
symbol: K02486
gene_biotype: protein_coding
description:
  Histidine kinase; Photoreceptor which exists in two forms that are reversibly interconvertible by light: the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region; In the N-terminal sectio; belongs to the phytochrome family; Contains 1 GAF domain; Contains 1 histidine kinase domain; KEGG: mth:MTH444 two-component system, unclassified family, sensor kinase.


ensembl_gene_id: UJ101_00733
symbol: FARSB|pheT
gene_biotype: protein_coding
description:
  phenylalanine--tRNA ligase; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily; Contains 1 B5 domain; Contains 1 FDX-ACB domain; Contains 1 tRNA-binding domain; KEGG: lfe:LAF_1288 phenylalanyl-tRNA synthetase beta chain.


ensembl_gene_id: UJ101_00734
symbol: DPO3B|dnaN
gene_biotype: protein_coding
description:
  DNA-directed DNA polymerase; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of repl [...]


ensembl_gene_id: UJ101_00735
symbol: AtD-2HGDH
gene_biotype: protein_coding
description:
  Catalyzes the oxidation of D-2-hydroxyglutarate to alpha-ketoglutarate. May be involved in the catabolism of propionyl-CoA derived from beta-oxidation. Involved in degradation of lysine for the supply of carbon and electrons to the ETF/ETFQO complex during dark-induced sugar starvation; Belongs to the FAD-binding oxidoreductase/transferase type 4 family; Contains 1 FAD-binding PCMH-type domain; KEGG: dpp:DICPUDRAFT_158305 D-2-hydroxyglutarate dehydrogenase.


ensembl_gene_id: UJ101_00736
symbol: APD06274.1
gene_biotype: protein_coding
description:
  Histidine kinase; Cytokinins (CK) receptor related to bacterial two- component regulators. Functions as a histidine kinase and transmits the stress signal to a downstream MAPK cascade. This protein undergoes an ATP-dependent autophosphorylation at a conserved histidine residue in the kinase core, and a phosphoryl group is then transferred to a conserved aspartate residue in the receiver domain. In the presence of cytokinin, feed phosphate to phosphorelay-integrating histidine phosphotransfer protein (HPt) and activates subsequent cascade. Involved in meristems establishment in seedling [...]


ensembl_gene_id: UJ101_00742
symbol: APD06280.1
gene_biotype: protein_coding
description:
  Involved in the active translocation of vitamin B12 (cyanocobalamin) across the outer membrane to the periplasmic space. It derives its energy for transport by interacting with the trans-periplasmic membrane protein TonB; Belongs to the TonB-dependent receptor family. BtuB (TC 1.B.14.3.1) subfamily.


ensembl_gene_id: UJ101_00745
symbol: APD06283.1
gene_biotype: protein_coding
description:
  High-affinity uptake of glycine betaine. Does not mediate either carnitine or choline uptake; Belongs to the BCCT transporter (TC 2.A.15) family.


ensembl_gene_id: UJ101_00746
symbol: truA|PUS1
gene_biotype: protein_coding
description:
  tRNA pseudouridine(38-40) synthase; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.


ensembl_gene_id: UJ101_00747
symbol: APD06285.1
gene_biotype: protein_coding
description:
  Alkaline phosphatase with broad substrate specificity. Has phosphatase activity towards nucleotide phosphates with a preference for ATP. Active towards a great variety of phosphomonoesters with the exception of 2',3'-cyclic AMP and myo- inositol hexakisphosphate.


ensembl_gene_id: UJ101_00749
symbol: APD06287.1
gene_biotype: protein_coding
description:
  XTP/dITP diphosphatase; Required to maintain the full capacity of the mycobacteria to respond to oxidative stress via the degradation of the oxidation-induced damaged nucleotides. It hydrolyzes all canonical (d)NTPs, as well as the mutagenic dUTP and 8-oxo-7,8- dihydro-2'-deoxyguanosine 5'-triphosphate (8-oxo-dGTP). Also involved in the transcriptional activation of RelA in response to oxidative stress; Belongs to the nucleoside triphosphate pyrophosphohydrolase family; KEGG: bth:BT_4350 XTP/dITP diphosphohydrolase.


ensembl_gene_id: UJ101_00751
symbol: PDF|def
gene_biotype: protein_coding
description:
  Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.


ensembl_gene_id: UJ101_00752
symbol: ruvX
gene_biotype: protein_coding
description:
  Putative pre-16S rRNA nuclease; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.


ensembl_gene_id: UJ101_00758
symbol: APD06295.1
gene_biotype: protein_coding
description:
  Regulatory protein for the msm operon for multiple sugar metabolism. Activates the transcription of the msmEFGK, aga, dexB and gftA genes. Contains 1 HTH araC/xylS-type DNA-binding domain.


ensembl_gene_id: UJ101_00763
symbol: psd|PISD
gene_biotype: protein_coding
description:
  Belongs to the phosphatidylserine decarboxylase family. Type 2 subfamily; KEGG: gsn:YC6258_05153 phosphatidylserine decarboxylase.


ensembl_gene_id: UJ101_00764
symbol: APD06301.1
gene_biotype: protein_coding
description:
  Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating); Catalyzes the oxidative phosphorylation of glyceraldehyde 3-phosphate (G3P) to 1,3-bisphosphoglycerate (BPG) using the cofactor NAD. The first reaction step involves the formation of a hemiacetal intermediate between G3P and a cysteine residue, and this hemiacetal intermediate is then oxidized to a thioester, with concomitant reduction of NAD to NADH. The reduced NADH is then exchanged with the second NAD, and the thioester is attacked by a nucleophilic inorganic phosphate to produce BPG; Belongs to the glyceraldehyde-3-phosph [...]


ensembl_gene_id: UJ101_00766
symbol: APD06303.1
gene_biotype: protein_coding
description:
  Membrane-bound lytic murein transglycosylase D; Murein-degrading enzyme. May play a role in recycling of muropeptides during cell elongation and/or cell division (By similarity); Belongs to the transglycosylase Slt family; Contains 2 LysM repeats.


ensembl_gene_id: UJ101_00767
symbol: tatA
gene_biotype: protein_coding
description:
  Sec-independent protein translocase protein TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.


ensembl_gene_id: UJ101_00771
symbol: dut|DUT
gene_biotype: protein_coding
description:
  DUTP diphosphatase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family.


ensembl_gene_id: UJ101_00773
symbol: gpsA
gene_biotype: protein_coding
description:
  Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family; KEGG: lca:LSEI_0947 glycerol-3-phosphate dehydrogenase (NAD(P)+).


ensembl_gene_id: UJ101_00774
symbol: APD06311.1
gene_biotype: protein_coding
description:
  Lysophospholipase NTE1; Intracellular phospholipase B that catalyzes the double deacylation of phosphatidylcholine (PC) to glycerophosphocholine (GroPCho). Plays an important role in membrane lipid homeostasis. Responsible for the rapid PC turnover in response to inositol, elevated temperatures, or when choline is present in the growth medium (By similarity); Belongs to the NTE family; Contains 2 cyclic nucleotide-binding domains; Contains 1 patatin domain.


ensembl_gene_id: UJ101_00777
symbol: LTA4H
gene_biotype: protein_coding
description:
  leukotriene-A(4) hydrolase; Aminopeptidase that preferentially cleaves tripeptides. Also has low epoxide hydrolase activity (in vitro). Can hydrolyze an epoxide moiety of LTA(4) to form LTB(4) (in vitro) (By similarity); Belongs to the peptidase M1 family; KEGG: jcu:105635222 leukotriene-A4 hydrolase.


ensembl_gene_id: UJ101_00778
symbol: plsC
gene_biotype: protein_coding
description:
  1-acylglycerol-3-phosphate O-acyltransferase; KEGG: chz:CHSO_0800 1-acyl-sn-glycerol-3-phosphate acyltransferase.


ensembl_gene_id: UJ101_00779
symbol: glpQ|ugpQ
gene_biotype: protein_coding
description:
  Glycerophosphoryl diester phosphodiesterase hydrolyzes deacylated phospholipids to G3P and the corresponding alcohols. Belongs to the glycerophosphoryl diester phosphodiesterase family; Contains 1 GP-PDE domain; KEGG: win:WPG_2658 glycerophosphoryl diester phosphodiesterase.


ensembl_gene_id: UJ101_00782
symbol: accD
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA.


ensembl_gene_id: UJ101_00783
symbol: yiaY
gene_biotype: protein_coding
description:
  Alcohol dehydrogenase; Catalyzes the first step of the biosynthesis of Kdo8N (8-amino-3,8-dideoxy-D-manno-octulosonate) from Kdo (3-deoxy-D- manno-octulosonate); Belongs to the iron-containing alcohol dehydrogenase family; KEGG: ppt:PPS_2070 alcohol dehydrogenase.


ensembl_gene_id: UJ101_00785
symbol: kdsB
gene_biotype: protein_coding
description:
  3-deoxy-manno-octulosonate cytidylyltransferase; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria; Belongs to the KdsB family; KEGG: rfr:Rfer_1242 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase).


ensembl_gene_id: UJ101_00786
symbol: APD06323.1
gene_biotype: protein_coding
description:
  dTDP-4-amino-4,6-dideoxygalactose transaminase; Catalyzes the second (last) step of the biosynthesis of Kdo8N (8-amino-3,8-dideoxy-D-manno-octulosonate) from Kdo (3- deoxy-D-manno-octulosonate); Belongs to the DegT/DnrJ/EryC1 family; KEGG: mic:Mic7113_6540 dTDP-4-amino-4,6-dideoxygalactose transaminase.


ensembl_gene_id: UJ101_00787
symbol: folD
gene_biotype: protein_coding
description:
  Methylenetetrahydrofolate dehydrogenase (NADP(+)); Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.


ensembl_gene_id: UJ101_00788
symbol: queE
gene_biotype: protein_coding
description:
  7-carboxy-7-deazaguanine synthase; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds.


ensembl_gene_id: UJ101_00791
symbol: metF|MTHFR
gene_biotype: protein_coding
description:
  Major methylenetetrahydrofolate reductase required to generate the methyl groups necessary for methionine synthetase to convert homocysteine to methionine. Performs 80 to 85 percent of the total methylenetetrahydrofolate reductase activity of the cells; Belongs to the methylenetetrahydrofolate reductase family; KEGG: cmr:Cycma_3066 methylenetetrahydrofolate reductase (NADPH).


ensembl_gene_id: UJ101_00792
symbol: metH|MTR
gene_biotype: protein_coding
description:
  Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.


ensembl_gene_id: UJ101_00793
symbol: APD06330.1
gene_biotype: protein_coding
description:
  Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate (By similarity); Belongs to the vitamin-B12 dependent methionine synthase family; Contains 1 AdoMet activation domain; Contains 1 B12-binding domain; Contains 1 B12-binding N-terminal domain; Contains 1 Hcy-binding domain; Contains 1 pterin-binding domain; KEGG: phe:Phep_3799 5-methyltetrahydrofolate--homocysteine methyltransferase.


ensembl_gene_id: UJ101_00795
symbol: obg
gene_biotype: protein_coding
description:
  GTPase Obg; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.


ensembl_gene_id: UJ101_00796
symbol: adk|AK
gene_biotype: protein_coding
description:
  Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.


ensembl_gene_id: UJ101_00797
symbol: hprT|hpt|HPRT1
gene_biotype: protein_coding
description:
  Belongs to the purine/pyrimidine phosphoribosyltransferase family; KEGG: pah:Poras_0488 hypoxanthine phosphoribosyltransferase.


ensembl_gene_id: UJ101_00799
symbol: hemN|hemZ
gene_biotype: protein_coding
description:
  Anaerobic transformation of coproporphyrinogen-III into protoporphyrinogen-IX. Dedicated to bacteriochlorophyll biosynthesis. Belongs to the anaerobic coproporphyrinogen-III oxidase family; KEGG: teq:TEQUI_0642 oxygen-independent coproporphyrinogen III oxidase.


ensembl_gene_id: UJ101_00801
symbol: kdsA
gene_biotype: protein_coding
description:
  3-deoxy-8-phosphooctulonate synthase; Belongs to the KdsA family; KEGG: chz:CHSO_2710 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase).


ensembl_gene_id: UJ101_00809
symbol: ispB
gene_biotype: protein_coding
description:
  All-trans-octaprenyl-diphosphate synthase; Supplies heptaprenyl diphosphate, the precursor for the side chain of the isoprenoid quinone menaquinone-7 (MQ-7). Belongs to the FPP/GGPP synthase family; KEGG: alv:Alvin_2159 octaprenyl-diphosphate synthase.


ensembl_gene_id: UJ101_00810
symbol: secF
gene_biotype: protein_coding
description:
  Protein translocase subunit SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.


ensembl_gene_id: UJ101_00811
symbol: APD06348.1
gene_biotype: protein_coding
description:
  Sec-independent protein translocase protein TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system; Belongs to the TatA/E family.


ensembl_gene_id: UJ101_00812
symbol: APD06349.1
gene_biotype: protein_coding
description:
  4-O-methyltransferase for the lactone ring of midecamycin and other macrolide antibiotics. Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-dependent O- methyltransferase family; KEGG: ami:Amir_4258 caffeoyl-CoA O-methyltransferase.


ensembl_gene_id: UJ101_00815
symbol: SGSH
gene_biotype: protein_coding
description:
  N-sulfoglucosamine sulfohydrolase; Belongs to the sulfatase family; KEGG: gag:Glaag_1823 N-sulfoglucosamine sulfohydrolase.


ensembl_gene_id: UJ101_00816
symbol: APD06353.1
gene_biotype: protein_coding
description:
  N-sulfoglucosamine sulfohydrolase; Required for the lysosomal degradation of heparan sulfate and dermatan sulfate. Belongs to the sulfatase family; KEGG: aqu:100638186 N-sulfoglucosamine sulfohydrolase.


ensembl_gene_id: UJ101_00820
symbol: lacZ
gene_biotype: protein_coding
description:
  Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family; KEGG: fbc:FB2170_10449 beta-galactosidase.


ensembl_gene_id: UJ101_00822
symbol: GNS
gene_biotype: protein_coding
description:
  N-acetylglucosamine-6-sulfatase; May be a structural component of the extracellular matrices involved in cell movement during morphogenesis. Belongs to the sulfatase family; KEGG: vfi:VF_A1007 N-acetylglucosamine-6-sulfatase.


ensembl_gene_id: UJ101_00823
symbol: ARSA
gene_biotype: protein_coding
description:
  Cerebroside-sulfatase; May be essential for the correct composition of cartilage and bone matrix during development. Has no activity toward steroid sulfates (By similarity); Belongs to the sulfatase family; KEGG: rba:RB9192 arylsulfatase A.


ensembl_gene_id: UJ101_00824
symbol: K01138
gene_biotype: protein_coding
description:
  Putative sulfatase YidJ; Belongs to the sulfatase family; KEGG: rba:RB3403 uncharacterized sulfatase; Sulfuric ester hydrolases.


ensembl_gene_id: UJ101_00825
symbol: IDS
gene_biotype: protein_coding
description:
  Iduronate-2-sulfatase; Required for the lysosomal degradation of heparan sulfate and dermatan sulfate. Belongs to the sulfatase family; KEGG: dgr:Dgri_GH16111 iduronate 2-sulfatase.


ensembl_gene_id: UJ101_00827
symbol: APD06364.1
gene_biotype: protein_coding
description:
  Arylsulfatase; May be essential for the correct composition of cartilage and bone matrix during development. Has no activity toward steroid sulfates. Belongs to the sulfatase family; KEGG: fbc:FB2170_14578 arylsulfatase.


ensembl_gene_id: UJ101_00829
symbol: galK
gene_biotype: protein_coding
description:
  Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Is very specific for its substrate, since it is not able to use D- glucose, D-fructose, D-mannose, 2-deoxy-D-glucose, and D- glucosamine as substrates; Belongs to the GHMP kinase family. GalK subfamily; KEGG: cpi:Cpin_1466 galactokinase.


ensembl_gene_id: UJ101_00830
symbol: galT|GALT
gene_biotype: protein_coding
description:
  Belongs to the galactose-1-phosphate uridylyltransferase type 1 family; KEGG: eca:ECA3171 UDPglucose--hexose-1-phosphate uridylyltransferase.


ensembl_gene_id: UJ101_00831
symbol: APD06368.1
gene_biotype: protein_coding
description:
  Carboxypeptidase that may play an important role in the hydrolysis of circulating peptides. Catalyzes more efficiently the hydrolysis of dipeptides with unsubstituted terminals into amino acids (By similarity); Belongs to the peptidase M28 family.


ensembl_gene_id: UJ101_00832
symbol: APD06369.1
gene_biotype: protein_coding
description:
  Sodium/glucose cotransporter; Actively transports glucose into cells by Na(+) cotransport with a Na(+) to glucose coupling ratio of 2:1. Efficient substrate transport in mammalian kidney is provided by the concerted action of a low affinity high capacity and a high affinity low capacity Na(+)/glucose cotransporter arranged in series along kidney proximal tubules. Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.


ensembl_gene_id: UJ101_00838
symbol: fabH
gene_biotype: protein_coding
description:
  Beta-ketoacyl-[acyl-carrier-protein] synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.


ensembl_gene_id: UJ101_00842
symbol: guaB
gene_biotype: protein_coding
description:
  IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.


ensembl_gene_id: UJ101_00850
symbol: ribF
gene_biotype: protein_coding
description:
  Riboflavin kinase; Belongs to the RibF family; KEGG: dca:Desca_1489 riboflavin kinase / FMN adenylyltransferase.


ensembl_gene_id: UJ101_00851
symbol: ATPF1B|atpD
gene_biotype: protein_coding
description:
  H(+)-transporting two-sector ATPase; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.


ensembl_gene_id: UJ101_00852
symbol: APD06389.1
gene_biotype: protein_coding
description:
  ATP synthase epsilon chain; Produces ATP from ADP in the presence of a proton gradient across the membrane; Belongs to the ATPase epsilon chain family.


ensembl_gene_id: UJ101_00860
symbol: prpD
gene_biotype: protein_coding
description:
  2-methylcitrate dehydratase; Involved in the catabolism of short chain fatty acids (SCFA) via the tricarboxylic acid (TCA)(acetyl degradation route) and via the 2-methylcitrate cycle I (propionate degradation route). Catalyzes the stereospecific dehydration of (2S,3S)-2- methylcitrate (2-MC) to yield the cis isomer of 2-methyl-aconitate. Could also catalyze the dehydration of citrate and the hydration of cis-aconitate (By similarity); Belongs to the PrpD family; KEGG: bba:Bd2500 2-methylcitrate dehydratase.


ensembl_gene_id: UJ101_00861
symbol: prpB
gene_biotype: protein_coding
description:
  Methylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate.


ensembl_gene_id: UJ101_00862
symbol: APD06399.1
gene_biotype: protein_coding
description:
  Citrate (Si)-synthase; Involved in the catabolism of short chain fatty acids (SCFA) via the tricarboxylic acid (TCA)(acetyl degradation route) and via the 2-methylcitrate cycle I (propionate degradation route). Catalyzes the Claisen condensation of propionyl-CoA and oxaloacetate (OAA) to yield (2S,3S)-2-methylcitrate (2-MC) and CoA. Also catalyzes the condensation of oxaloacetate with acetyl- CoA but with a lower specificity; Belongs to the citrate synthase family; KEGG: aca:ACP_1789 citrate synthase.


ensembl_gene_id: UJ101_00868
symbol: ftsY
gene_biotype: protein_coding
description:
  Signal recognition particle receptor FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC).


ensembl_gene_id: UJ101_00880
symbol: argH|ASL
gene_biotype: protein_coding
description:
  Belongs to the lyase 1 family. Argininosuccinate lyase subfamily; KEGG: ccp:CHC_T00004007001 argininosuccinate lyase.


ensembl_gene_id: UJ101_00881
symbol: APD06413.1
gene_biotype: protein_coding
description:
  Transcriptional regulatory protein; Member of the two-component regulatory system BasS/BasR. BasR induces the transcription of the ugd, ais, arnBCADTEF and eptA-basRS loci, all involved in resistance to polymyxin (By similarity); Contains 1 OmpR/PhoB-type DNA-binding domain; Contains 1 response regulatory domain.


ensembl_gene_id: UJ101_00882
symbol: qseC
gene_biotype: protein_coding
description:
  Histidine kinase; KEGG: oce:GU3_02840 two-component system, OmpR family, sensor histidine kinase QseC.


ensembl_gene_id: UJ101_00885
symbol: ilvA|tdcB
gene_biotype: protein_coding
description:
  Threonine ammonia-lyase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA.


ensembl_gene_id: UJ101_00887
symbol: xerC
gene_biotype: protein_coding
description:
  Tyrosine recombinase XerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.


ensembl_gene_id: UJ101_00888
symbol: aroQ|qutE
gene_biotype: protein_coding
description:
  3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.


ensembl_gene_id: UJ101_00891
symbol: APD06423.1
gene_biotype: protein_coding
description:
  tRNA threonylcarbamoyladenosine biosynthesis protein TsaB; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaD and Tsa; this reaction does not require ATP in vitro. TsaB seems to play an indirect role in the t(6)A biosynthesis pathway, possibly in regulating the core enzymatic function of TsaD (By similarity). Neither binds polyphosphates nor a wide range of nu [...]


ensembl_gene_id: UJ101_00894
symbol: HMGCL|hmgL
gene_biotype: protein_coding
description:
  hydroxymethylglutaryl-CoA lyase; Involved in the catabolism of branched amino acids such as leucine; Belongs to the HMG-CoA lyase family; KEGG: acm:AciX9_1108 hydroxymethylglutaryl-CoA lyase.


ensembl_gene_id: UJ101_00896
symbol: ACE
gene_biotype: protein_coding
description:
  May be involved in the specific maturation or degradation of a number of bioactive peptides. May have a role in the specification of heart progenitors; Belongs to the peptidase M2 family; KEGG: llo:LLO_1982 peptidyl-dipeptidase A.


ensembl_gene_id: UJ101_00897
symbol: APRT|apt
gene_biotype: protein_coding
description:
  Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.


ensembl_gene_id: UJ101_00898
symbol: msbA
gene_biotype: protein_coding
description:
  Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation; Belongs to the ABC transporter superfamily. Lipid exporter (TC 3.A.1.106) family; Contains 1 ABC transmembrane type-1 domain; Contains 1 ABC transporter domain; KEGG: scn:Solca_3479 ATP-binding cassette, subfamily B, bacterial MsbA; Acting on acid anhydrides; catalyzing transmembrane movement of substances.


ensembl_gene_id: UJ101_00904
symbol: aroK|aroL
gene_biotype: protein_coding
description:
  Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.


ensembl_gene_id: UJ101_00909
symbol: ABC.SS.A
gene_biotype: protein_coding
description:
  Monosaccharide-transporting ATPase; Part of a binding-protein-dependent transport system for arginine. Probably responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily; Contains 1 ABC transporter domain; KEGG: clj:CLJU_c29990 simple sugar transport system ATP-binding protein.


ensembl_gene_id: UJ101_00912
symbol: IMPA|suhB
gene_biotype: protein_coding
description:
  Inositol-phosphate phosphatase; Converts 3'(2')-phosphoadenosine 5'-phosphate (PAP) to AMP. May also convert adenosine 3'-phosphate 5'-phosphosulfate (PAPS) to adenosine 5'-phosphosulfate (APS) (By similarity); Belongs to the inositol monophosphatase family; KEGG: lil:LA_2315 myo-inositol-1(or 4)-monophosphatase.


ensembl_gene_id: UJ101_00913
symbol: deoC|DERA
gene_biotype: protein_coding
description:
  Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.


ensembl_gene_id: UJ101_00917
symbol: APD06448.1
gene_biotype: protein_coding
description:
  Protein RdxA; Predicted to be involved in a redox process. Contains 2 4Fe-4S ferredoxin-type domains.


ensembl_gene_id: UJ101_00920
symbol: ccoNO
gene_biotype: protein_coding
description:
  Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. Co I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c or a quinol are transferred to the bimetallic center formed by a high-spin heme and copper B. Belongs to the heme-copper respiratory oxidase family; KEGG: cpi:Cpin_0681 cytochrome c oxidase cbb3-type subunit I/II.


ensembl_gene_id: UJ101_00922
symbol: copA|ATP7
gene_biotype: protein_coding
description:
  Cu(+) exporting ATPase; FixI is a pump of a specific cation involved in symbiotic nitrogen fixation. The four proteins FixG, FixH, FixI, and FixS may participate in a membrane-bound complex coupling the FixI cation pump with a redox process catalyzed by FixG. Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IB subfamily; Contains 1 HMA domain; KEGG: smg:SMGWSS_150 Cu+-exporting ATPase.


ensembl_gene_id: UJ101_00923
symbol: APD06454.1
gene_biotype: protein_coding
description:
  Global transcriptional regulator that complexes with cAMP and binds to specific DNA promoter sites, causing DNA- bending, to regulate transcription. cAMP improves binding to specific DNA sequences, probably by altering protein conformation. Involved in the regulation of gntP and gntK genes, which are involved in gluconate metabolism. May form dimers which bind to the aceB promoter region in the presence of cAMP and repress the glyoxylate bypass genes. It could be a positive regulator of rpf2 gene expression during growth on acetate as the sole carbon source, however because the cytosol [...]


ensembl_gene_id: UJ101_00925
symbol: APD06456.1
gene_biotype: protein_coding
description:
  nifU-like protein, mitochondrial; Involved in iron homeostasis within the mitochondrion where it is involved in the assembly of iron-sulfur proteins. May also be involved in the repair of iron sulfur clusters; Belongs to the NifU family.


ensembl_gene_id: UJ101_00929
symbol: APD06460.1
gene_biotype: protein_coding
description:
  Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. Constitutes, with BamD, the core component of the assembly machinery; Belongs to the BamA family; Contains 5 POTRA domains.


ensembl_gene_id: UJ101_00930
symbol: uppS
gene_biotype: protein_coding
description:
  Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific); Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.


ensembl_gene_id: UJ101_00932
symbol: ppnK|NADK
gene_biotype: protein_coding
description:
  NAD(+) kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.


ensembl_gene_id: UJ101_00934
symbol: pdxJ
gene_biotype: protein_coding
description:
  Pyridoxine 5'-phosphate synthase; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate.


ensembl_gene_id: UJ101_00936
symbol: ybfF
gene_biotype: protein_coding
description:
  Esterase; Displays esterase activity toward palmitoyl-CoA, malonyl-CoA and pNP-butyrate; Belongs to the DmpD/TodF/XylF esterase family; KEGG: sfc:Spiaf_2606 esterase; Acting on ester bonds.


ensembl_gene_id: UJ101_00943
symbol: APD06474.1
gene_biotype: protein_coding
description:
  Aspartate transaminase; Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family; KEGG: nhl:Nhal_3183 aspartate aminotransferase.


ensembl_gene_id: UJ101_00947
symbol: PRDX|ahpC
gene_biotype: protein_coding
description:
  Peroxiredoxin; Involved in redox regulation of the cell. Protects radical-sensitive enzymes from oxidative damage by a radical- generating system. Belongs to the AhpC/TSA family; Contains 1 thioredoxin domain; KEGG: aza:AZKH_1283 peroxiredoxin (alkyl hydroperoxide reductase subunit C).


ensembl_gene_id: UJ101_00952
symbol: APD06483.1
gene_biotype: protein_coding
description:
  Belongs to the saccharopine dehydrogenase family; KEGG: gfo:GFO_0103 saccharopine dehydrogenase (NAD+, L-glutamate forming).


ensembl_gene_id: UJ101_00956
symbol: miaA|TRIT1
gene_biotype: protein_coding
description:
  tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.


ensembl_gene_id: UJ101_00959
symbol: APD06490.1
gene_biotype: protein_coding
description:
  Sodium-dependent phosphate transport protein 2A; May be involved in actively transporting phosphate into cells via Na(+) cotransport in the renal brush border membrane. Probably mediates 70-80% of the apical influx. Belongs to the SLC34A transporter family.


ensembl_gene_id: UJ101_00960
symbol: icmF
gene_biotype: protein_coding
description:
  methylmalonyl-CoA mutase; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly.


ensembl_gene_id: UJ101_00961
symbol: oxa
gene_biotype: protein_coding
description:
  Beta-lactamase; Hydrolyzes both carbenicillin and oxacillin. Belongs to the class-D beta-lactamase family; KEGG: sgn:SGRA_0359 beta-lactamase class D.


ensembl_gene_id: UJ101_00964
symbol: pfpI
gene_biotype: protein_coding
description:
  Parkinson disease 7 domain-containing protein; Belongs to the peptidase C56 family; KEGG: asd:AS9A_2553 protease I; Glycosylases.


ensembl_gene_id: UJ101_00965
symbol: APD06496.1
gene_biotype: protein_coding
description:
  Protein smf; Essential for efficient chromosomal DNA transformation but not required for plasmid transformation; Belongs to the smf family.


ensembl_gene_id: UJ101_00967
symbol: coaX
gene_biotype: protein_coding
description:
  Pantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.


ensembl_gene_id: UJ101_00968
symbol: dacA
gene_biotype: protein_coding
description:
  Diadenylate cyclase; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria.


ensembl_gene_id: UJ101_00976
symbol: topA
gene_biotype: protein_coding
description:
  DNA topoisomerase; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA superc [...]


ensembl_gene_id: UJ101_00979
symbol: miaB
gene_biotype: protein_coding
description:
  tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.


ensembl_gene_id: UJ101_00980
symbol: APD06511.1
gene_biotype: protein_coding
description:
  Transcriptional regulatory protein FlbD; Activation of sigma-54-dependent flagellar gene promoters and strong negative autoregulatory effects on its own promoter. The synthesis and function of FlbD in C.crescentus is controlled by an internal cell-cycle clock. Contains 1 response regulatory domain; Contains 1 sigma-54 factor interaction domain.


ensembl_gene_id: UJ101_00983
symbol: APD06514.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.


ensembl_gene_id: UJ101_00984
symbol: groS
gene_biotype: protein_coding
description:
  10 kDa chaperonin; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.


ensembl_gene_id: UJ101_00985
symbol: groL
gene_biotype: protein_coding
description:
  60 kDa chaperonin; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.


ensembl_gene_id: UJ101_00987
symbol: APD06518.1
gene_biotype: protein_coding
description:
  Thrombospondin-2; Adhesive glycoprotein that mediates cell-to-cell and cell-to-matrix interactions; Belongs to the thrombospondin family; Contains 2 EGF-like domains; Contains 1 laminin G-like domain; Contains 1 TSP C-terminal (TSPC) domain; Contains 3 TSP type-1 domains; Contains 8 TSP type-3 repeats; Contains 1 VWFC domain.


ensembl_gene_id: UJ101_00988
symbol: recA
gene_biotype: protein_coding
description:
  Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.


ensembl_gene_id: UJ101_00991
symbol: APD06522.1
gene_biotype: protein_coding
description:
  Peroxiredoxin; Reduces hydrogen peroxide with reducing equivalents provided through the thioredoxin system. Could be involved in the photosystem II protection against hydrogen peroxide; Belongs to the AhpC/TSA family. PrxQ subfamily; Contains 1 thioredoxin domain; KEGG: psy:PCNPT3_08800 peroxiredoxin Q/BCP.


ensembl_gene_id: UJ101_00994
symbol: OGT
gene_biotype: protein_coding
description:
  Protein O-GlcNAc transferase; Belongs to the TMTC family; Contains 10 TPR repeats; KEGG: egr:104428688 protein O-GlcNAc transferase.


ensembl_gene_id: UJ101_00999
symbol: APD06530.1
gene_biotype: protein_coding
description:
  Displays arylsulfatase activity with pseudosubstrates at acidic pH, such as p-nitrocatechol sulfate; Belongs to the sulfatase family; KEGG: nwa:Nwat_0845 arylsulfatase.


ensembl_gene_id: UJ101_01005
symbol: phnP
gene_biotype: protein_coding
description:
  Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate; In the C-terminal sectio; belongs to the LipB family; Contains 1 BPL/LPL catalytic domain; KEGG: amu:Amuc_0878 phosphoribosyl 1,2-cyclic phosphate phosphodiesterase.


ensembl_gene_id: UJ101_01006
symbol: thiL
gene_biotype: protein_coding
description:
  Thiamine-phosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family.


ensembl_gene_id: UJ101_01007
symbol: ltaE
gene_biotype: protein_coding
description:
  L-threonine aldolase; Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde. L-threo-phenylserine and L- erythro-phenylserine are also good substrates (By similarity); Belongs to the threonine aldolase family; KEGG: ype:YPO1357 threonine aldolase.


ensembl_gene_id: UJ101_01019
symbol: gcvH
gene_biotype: protein_coding
description:
  Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.


ensembl_gene_id: UJ101_01021
symbol: ruvA
gene_biotype: protein_coding
description:
  DNA helicase; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.


ensembl_gene_id: UJ101_01022
symbol: maeB
gene_biotype: protein_coding
description:
  Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)); In the N-terminal sectio; belongs to the malic enzymes family; In the C-terminal sectio; belongs to the phosphate acetyltransferase and butyryltransferase family; KEGG: elb:VO54_03210 malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+).


ensembl_gene_id: UJ101_01023
symbol: APD06553.1
gene_biotype: protein_coding
description:
  Putative transcriptional regulator ycf27; Probable promoter-specific protein mediating the interaction between DNA and RNA polymerase. Contains 1 OmpR/PhoB-type DNA-binding domain; Contains 1 response regulatory domain.


ensembl_gene_id: UJ101_01024
symbol: phoR
gene_biotype: protein_coding
description:
  Histidine kinase; Member of the two-component regulatory system RprX/RprY. May activate RprY by phosphorylation. Contains 1 histidine kinase domain; KEGG: wvi:Weevi_0677 two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR.


ensembl_gene_id: UJ101_01025
symbol: coaE-2
gene_biotype: protein_coding
description:
  dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.


ensembl_gene_id: UJ101_01027
symbol: APD06557.1
gene_biotype: protein_coding
description:
  Immunogenic membrane protein YajC; Not know; elicits an immunogenic response in mice. Belongs to the UPF0092 family.


ensembl_gene_id: UJ101_01029
symbol: APD06559.1
gene_biotype: protein_coding
description:
  N utilization substance protein B like protein; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.


ensembl_gene_id: UJ101_01030
symbol: APD06560.1
gene_biotype: protein_coding
description:
  Putative ABC transporter ATP-binding protein YknU; Belongs to the ABC transporter superfamily; Contains 1 ABC transmembrane type-1 domain; Contains 1 ABC transporter domain.


ensembl_gene_id: UJ101_01032
symbol: malZ
gene_biotype: protein_coding
description:
  Alpha-glucosidase; Glucoamylase that hydrolyzes alpha-1,4-glucosidic linkages, alpha-1,6-, alpha-1,3- and alpha-1,2-glucosidic linkages during starch degradation; Belongs to the glycosyl hydrolase 97 family; KEGG: bsb:Bresu_2907 alpha-glucosidase.


ensembl_gene_id: UJ101_01034
symbol: folB
gene_biotype: protein_coding
description:
  Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.


ensembl_gene_id: UJ101_01036
symbol: GPI|pgi
gene_biotype: protein_coding
description:
  Glucose-6-phosphate isomerase; Belongs to the GPI family; KEGG: gfo:GFO_3166 glucose-6-phosphate isomerase.


ensembl_gene_id: UJ101_01037
symbol: mepM
gene_biotype: protein_coding
description:
  Putative metalloprotease; Belongs to the peptidase M23B family; KEGG: bab:bbp296 murein DD-endopeptidase; Metalloendopeptidases.


ensembl_gene_id: UJ101_01039
symbol: APD06568.1
gene_biotype: protein_coding
description:
  Fe/S bioproteinis protein NfuA; Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe/S proteins. Could also act as a scaffold/chaperone for damaged Fe/S proteins; Belongs to the NfuA family.


ensembl_gene_id: UJ101_01040
symbol: APD06569.1
gene_biotype: protein_coding
description:
  Cytosolic Fe-S cluster assembly factor nubp2; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.


ensembl_gene_id: UJ101_01043
symbol: rplU
gene_biotype: protein_coding
description:
  50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.


ensembl_gene_id: UJ101_01045
symbol: WARS|trpS
gene_biotype: protein_coding
description:
  tryptophan--tRNA ligase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: UJ101_01050
symbol: pta
gene_biotype: protein_coding
description:
  Phosphate acetyltransferase; Catalyzes the conversion of butyryl-CoA through butyryl phosphate to butyrate. Belongs to the phosphate acetyltransferase and butyryltransferase family; KEGG: fma:FMG_1615 phosphate acetyltransferase.


ensembl_gene_id: UJ101_01051
symbol: yueD
gene_biotype: protein_coding
description:
  Benzil reductase ((S)-benzoin forming); Reduces benzil stereospecifically to (S)-benzoin. Can also reduce 1-phenyl-1,2-propanedione, 1,4-naphthoquinone, 1-(4- methyl-phenyl)-2-phenyl-ethane-1,2-dione, 1-(4-fluoro-phenyl)-2- phenyl-ethane-1,2-dione, methyl benzoylformate, p- nitrobenzaldehyde in decreasing order; Belongs to the short-chain dehydrogenases/reductases (SDR) family; KEGG: bbd:Belba_3759 benzil reductase ((S)-benzoin forming).


ensembl_gene_id: UJ101_01052
symbol: APD06581.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage; Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily.


ensembl_gene_id: UJ101_01053
symbol: APD06582.1
gene_biotype: protein_coding
description:
  Major NAD(P)H-flavin oxidoreductase; Involved in bioluminescence. It is a good supplier of reduced flavin mononucleotide (FMNH2) to the bioluminescence reaction. Major FMN reductase. It is capable of using both NADH and NADPH as electron donors. As electron acceptor, FMN is the most effective, FAD is considerably effective, and riboflavin is the least effective. Belongs to the nitroreductase family; KEGG: fpp:FPB0191_01538 nitroreductase / dihydropteridine reductase; Oxidoreductases.


ensembl_gene_id: UJ101_01067
symbol: APD06596.1
gene_biotype: protein_coding
description:
  Pediocin PA-1 transport/processing ATP-binding protein PedD; Involved in the export process of the bacteriocin pediocin PA-1/AcH. Is also essential for pediocin production. Belongs to the ABC transporter superfamily. Pediocin PA-1 exporter (TC 3.A.1.112.2) family; Contains 1 ABC transmembrane type-1 domain; Contains 1 ABC transporter domain; Contains 1 peptidase C39 domain.


ensembl_gene_id: UJ101_01075
symbol: PREP
gene_biotype: protein_coding
description:
  Prolyl oligopeptidase; Probable serine peptidase whose precise substrate specificity remains unclear; Belongs to the peptidase S9A family; KEGG: cph:Cpha266_1010 prolyl oligopeptidase.


ensembl_gene_id: UJ101_01079
symbol: APD06608.1
gene_biotype: protein_coding
description:
  Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC-XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids; Belongs to the 'phage' integrase family. XerD subfamily.


ensembl_gene_id: UJ101_01085
symbol: ABC.FEV.A
gene_biotype: protein_coding
description:
  Iron-chelate-transporting ATPase; Belongs to the ABC transporter superfamily. Ycf16 family; Contains 1 ABC transporter domain; KEGG: pfn:HZ99_22380 iron complex transport system ATP-binding protein.


ensembl_gene_id: UJ101_01088
symbol: APD06616.1
gene_biotype: protein_coding
description:
  Catalytic subunit of the KtrAB potassium uptake transporter. The 2 major potassium transporter complexes KtrAB and KtrCD confer resistance to both suddenly imposed and prolonged osmotic stress; Belongs to the KtrA potassium transport family; Contains 1 RCK C-terminal domain; Contains 1 RCK N-terminal domain.


ensembl_gene_id: UJ101_01089
symbol: APD06617.1
gene_biotype: protein_coding
description:
  Part of the Na(+)-dependent high affinity K(+) uptake system KtrAB. KtrB is the K(+)-translocating subunit; Belongs to the TrkH potassium transport family. Ktr (TC 2.A.38.4) subfamily.


ensembl_gene_id: UJ101_01090
symbol: rimM
gene_biotype: protein_coding
description:
  Ribosome maturation factor RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.


ensembl_gene_id: UJ101_01097
symbol: nadD
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).


ensembl_gene_id: UJ101_01098
symbol: pntA
gene_biotype: protein_coding
description:
  NAD(P)(+) transhydrogenase (Re/Si-specific); May play a role in cell wall synthesis as L-alanine is an important constituent of the peptidoglycan layer; Belongs to the AlaDH/PNT family; KEGG: eco:b1603 NAD(P) transhydrogenase subunit alpha.


ensembl_gene_id: UJ101_01101
symbol: APD06629.1
gene_biotype: protein_coding
description:
  Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.


ensembl_gene_id: UJ101_01102
symbol: fabF
gene_biotype: protein_coding
description:
  Beta-ketoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.


ensembl_gene_id: UJ101_01104
symbol: pckA
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate carboxykinase (ATP); Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA.


ensembl_gene_id: UJ101_01105
symbol: NTH
gene_biotype: protein_coding
description:
  DNA-(apurinic or apyrimidinic site) lyase; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.


ensembl_gene_id: UJ101_01109
symbol: ubiA
gene_biotype: protein_coding
description:
  4-hydroxybenzoate polyprenyltransferase; Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C2 hydroxyl of (S)-3-O-geranylgeranylglyceryl phosphate (GGGP). This reaction is the second ether-bond-formation step in the biosynthesis of archaeal membrane lipids; Belongs to the UbiA prenyltransferase family. DGGGP synthase subfamily; KEGG: coc:Coch_0306 4-hydroxybenzoate polyprenyltransferase.


ensembl_gene_id: UJ101_01110
symbol: APD06638.1
gene_biotype: protein_coding
description:
  23S rRNA pseudouridine(2605) synthase; Belongs to the pseudouridine synthase RsuA family; Contains 1 S4 RNA-binding domain; KEGG: pzu:PHZ_c3167 23S rRNA pseudouridine2605 synthase.


ensembl_gene_id: UJ101_01111
symbol: APD06639.1
gene_biotype: protein_coding
description:
  Member of the two-component regulatory system PhoP/PhoR involved in the alkaline phosphatase genes regulation. PhoR may function as a membrane-associated protein kinase that phosphorylates PhoP in response to environmental signals. Contains 1 histidine kinase domain; Contains 1 PAS (PER-ARNT-SIM) domain; KEGG: ava:Ava_1564 UJ101; Phosphotransferases with a nitrogenous group as acceptor.


ensembl_gene_id: UJ101_01112
symbol: leuB
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.


ensembl_gene_id: UJ101_01114
symbol: cimA
gene_biotype: protein_coding
description:
  (R)-citramalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate). Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily; KEGG: mmt:Metme_0870 D-citramalate synthase.


ensembl_gene_id: UJ101_01115
symbol: leuD
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydratase; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily.


ensembl_gene_id: UJ101_01116
symbol: leuC
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydratase; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.


ensembl_gene_id: UJ101_01117
symbol: leuA
gene_biotype: protein_coding
description:
  2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily.


ensembl_gene_id: UJ101_01118
symbol: ilvC
gene_biotype: protein_coding
description:
  Ketol-acid reductoisomerase (NADP(+)); Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate.


ensembl_gene_id: UJ101_01119
symbol: ilvH|ilvN
gene_biotype: protein_coding
description:
  Belongs to the acetolactate synthase small subunit family; Contains 1 ACT domain; KEGG: ftu:FTT_0642 acetolactate synthase I/III small subunit.


ensembl_gene_id: UJ101_01120
symbol: ilvB|ilvG|ilvI
gene_biotype: protein_coding
description:
  Acetolactate synthase; Catalyzes the first step in the biosynthesis of branched-chain amino acids. Belongs to the TPP enzyme family; KEGG: rma:Rmag_0445 acetolactate synthase I/II/III large subunit.


ensembl_gene_id: UJ101_01121
symbol: ilvD
gene_biotype: protein_coding
description:
  Dihydroxy-acid dehydratase; Catalyzes the dehydration of 2,3-dihydroxy-3-isovalerate or 2,3-dihydroxy-3-methylvalerate to the 2-oxo acids 3-methyl-2- oxobutanoate (3MOB) or 3-methyl-2-oxopentanoate (3MOP); Belongs to the IlvD/Edd family; KEGG: scn:Solca_1883 dihydroxy-acid dehydratase.


ensembl_gene_id: UJ101_01122
symbol: APD06650.1
gene_biotype: protein_coding
description:
  Dipeptidyl aminopeptidase BII; Catalyzes the removal of dipeptides from the N-terminus of oligopeptides.


ensembl_gene_id: UJ101_01124
symbol: radA
gene_biotype: protein_coding
description:
  DNA repair protein RadA like protein; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.


ensembl_gene_id: UJ101_01126
symbol: APD06654.1
gene_biotype: protein_coding
description:
  Putative tRNA-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.


ensembl_gene_id: UJ101_01127
symbol: lytE
gene_biotype: protein_coding
description:
  Putative endopeptidase; Belongs to the peptidase C40 family; KEGG: bif:N288_10955 peptidoglycan endopeptidase LytE; Acting on peptide bonds (peptidases).


ensembl_gene_id: UJ101_01131
symbol: APD06657.1
gene_biotype: protein_coding
description:
  Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family; KEGG: bpi:BPLAN_357 D-3-phosphoglycerate dehydrogenase.


ensembl_gene_id: UJ101_01133
symbol: ksgA
gene_biotype: protein_coding
description:
  16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.


ensembl_gene_id: UJ101_01136
symbol: moxR
gene_biotype: protein_coding
description:
  Uncharacterized protein; Belongs to the MoxR family; KEGG: bsa:Bacsa_0583 MoxR-like ATPase; Acting on acid anhydrides; catalyzing transmembrane movement of substances.


ensembl_gene_id: UJ101_01137
symbol: APD06663.1
gene_biotype: protein_coding
description:
  Uncharacterized protein; To M.avium MAV169; KEGG: mtuh:I917_10510 MoxR-like ATPase; Acting on acid anhydrides; catalyzing transmembrane movement of substances.


ensembl_gene_id: UJ101_01145
symbol: sufS
gene_biotype: protein_coding
description:
  Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.


ensembl_gene_id: UJ101_01147
symbol: hchA
gene_biotype: protein_coding
description:
  D-lactate dehydratase; Functions as a holding molecular chaperone (holdase) which stabilizes unfolding intermediates and rapidly releases them in an active form once stress has abated. Plays an important role in protecting cells from severe heat shock and starvation, as well as in acid resistance of stationary-phase cells. It catalyzes the conversion of methylglyoxal (MG) to D-lactate in a single glutathione (GSH)-independent step; Belongs to the peptidase C56 family. HchA subfamily; KEGG: swd:Swoo_2968 molecular chaperone Hsp31 and glyoxalase 3.


ensembl_gene_id: UJ101_01154
symbol: panE|apbA
gene_biotype: protein_coding
description:
  2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.


ensembl_gene_id: UJ101_01157
symbol: ABC.PA.A
gene_biotype: protein_coding
description:
  Polar-amino-acid-transporting ATPase; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.


ensembl_gene_id: UJ101_01158
symbol: sucC
gene_biotype: protein_coding
description:
  succinate--CoA ligase (ADP-forming); Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.


ensembl_gene_id: UJ101_01160
symbol: APD06685.1
gene_biotype: protein_coding
description:
  Major starch-binding protein present at the surface of the cell. Mediates starch-binding before starch transport in the periplasm for degradation; Belongs to the SusD family.


ensembl_gene_id: UJ101_01169
symbol: frr
gene_biotype: protein_coding
description:
  Ribosome-recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.


ensembl_gene_id: UJ101_01174
symbol: APD06698.1
gene_biotype: protein_coding
description:
  RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. Belongs to the sigma-54 factor family.


ensembl_gene_id: UJ101_01175
symbol: NARS|asnS
gene_biotype: protein_coding
description:
  asparagine--tRNA ligase; Belongs to the class-II aminoacyl-tRNA synthetase family; KEGG: elv:FNIIJ_284 asparaginyl-tRNA synthetase.


ensembl_gene_id: UJ101_01177
symbol: APD06701.1
gene_biotype: protein_coding
description:
  Putative membrane protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. MmpL subfamily.


ensembl_gene_id: UJ101_01180
symbol: rng|cafA
gene_biotype: protein_coding
description:
  Ribonuclease; Involved in the processing of the 5'-end of 16S rRNA. Could be involved in chromosome segregation and cell division. It may be one of the components of the cytoplasmic axial filaments bundles or merely regulate the formation of this structure (By similarity); Belongs to the RNase E/G family. RNase G subfamily; Contains 1 S1 motif domain; KEGG: gsb:GSUB_02015 ribonuclease G; Endoribonucleases producing 5'-phosphomonoesters.


ensembl_gene_id: UJ101_01181
symbol: APD06705.1
gene_biotype: protein_coding
description:
  This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; Belongs to the bacterial histone-like protein family.


ensembl_gene_id: UJ101_01183
symbol: APD06707.1
gene_biotype: protein_coding
description:
  Single-stranded DNA-binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism; Contains 1 SSB domain.


ensembl_gene_id: UJ101_01187
symbol: PTH1|pth|spoVC
gene_biotype: protein_coding
description:
  aminoacyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.


ensembl_gene_id: UJ101_01188
symbol: SARS|serS
gene_biotype: protein_coding
description:
  serine--tRNA ligase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec); Belongs to the class-II aminoacyl-tRNA synthetase family. Type-1 seryl-tRNA synthetase subfamily; KEGG: sru:SRU_1855 seryl-tRNA synthetase.


ensembl_gene_id: UJ101_01190
symbol: rnr|vacB
gene_biotype: protein_coding
description:
  Ribonuclease; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.


ensembl_gene_id: UJ101_01192
symbol: APD06716.1
gene_biotype: protein_coding
description:
  Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family; Contains 1 ABC transporter domain.


ensembl_gene_id: UJ101_01194
symbol: gph
gene_biotype: protein_coding
description:
  Phosphoglycolate phosphatase; Specifically catalyzes the dephosphorylation of 2- phosphoglycolate; Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family; KEGG: beo:BEH_13420 phosphoglycolate phosphatase.


ensembl_gene_id: UJ101_01197
symbol: luxS
gene_biotype: protein_coding
description:
  S-ribosylhomocysteine lyase; Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5-dihydroxy-2,3-pentadione (DPD). Belongs to the LuxS family.


ensembl_gene_id: UJ101_01198
symbol: mtnN|mtn|pfs
gene_biotype: protein_coding
description:
  Adenosylhomocysteine nucleosidase; Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'- methylthioribose and S-ribosylhomocysteine, respectively. Belongs to the PNP/UDP phosphorylase family. MtnN subfamily.


ensembl_gene_id: UJ101_01204
symbol: mfd
gene_biotype: protein_coding
description:
  uvrABC system protein; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.


ensembl_gene_id: UJ101_01205
symbol: CARS|cysS
gene_biotype: protein_coding
description:
  cysteine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family; KEGG: cmr:Cycma_1944 cysteinyl-tRNA synthetase.


ensembl_gene_id: UJ101_01219
symbol: hppA
gene_biotype: protein_coding
description:
  Inorganic diphosphatase; Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na(+) movement across the membrane. Belongs to the H(+)-translocating pyrophosphatase (TC 3.A.10) family. K(+)-stimulated subfamily.


ensembl_gene_id: UJ101_01220
symbol: ypsC
gene_biotype: protein_coding
description:
  Ribosomal RNA large subunit methyltransferase K/L; Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA; Belongs to the methyltransferase superfamily. RlmKL family; Contains 1 THUMP domain; KEGG: eac:EAL2_c20930 putative N6-adenine-specific DNA methylase; Methyltransferases.


ensembl_gene_id: UJ101_01222
symbol: PRPS|prsA
gene_biotype: protein_coding
description:
  Ribose-phosphate diphosphokinase; Involved in the biosynthesis of ribose 1,5-bisphosphate. Catalyzes the transfer of pyrophosphoryl group from ATP to ribose- 5-phosphate to yield phosphoribosyl diphosphate (PRPP) and AMP; Belongs to the ribose-phosphate pyrophosphokinase family; KEGG: orh:Ornrh_1347 ribose-phosphate pyrophosphokinase.


ensembl_gene_id: UJ101_01223
symbol: rplY
gene_biotype: protein_coding
description:
  50S ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.


ensembl_gene_id: UJ101_01231
symbol: SOD2
gene_biotype: protein_coding
description:
  Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.


ensembl_gene_id: UJ101_01232
symbol: APD06751.1
gene_biotype: protein_coding
description:
  Catabolite control protein; Global transcriptional regulator of carbon catabolite repression (CCR) and carbon catabolite activation (CCA), which ensures optimal energy usage under diverse conditions. Interacts with either P-Ser-HPr or P-Ser-Crh, leading to the formation of a complex that binds to DNA at the catabolite-response elements (cre). Binding to DNA allows activation or repression of many different genes and operons; Contains 1 HTH lacI-type DNA-binding domain.


ensembl_gene_id: UJ101_01236
symbol: dcyD
gene_biotype: protein_coding
description:
  Belongs to the ACC deaminase/D-cysteine desulfhydrase family; KEGG: pat:Patl_1784 D-cysteine desulfhydrase.


ensembl_gene_id: UJ101_01237
symbol: yhbS
gene_biotype: protein_coding
description:
  Putative N-acetyltransferase YjhQ; Belongs to the acetyltransferase family; Contains 1 N-acetyltransferase domain; KEGG: mau:Micau_6249 putative acetyltransferase; Transferring groups other than amino-acyl groups.


ensembl_gene_id: UJ101_01242
symbol: ogt|MGMT
gene_biotype: protein_coding
description:
  methylated-DNA--[protein]-cysteine S-methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated.


ensembl_gene_id: UJ101_01243
symbol: dagK
gene_biotype: protein_coding
description:
  Diacylglycerol kinase (ATP); Probably phosphorylates lipid; the in vivo substrate is unknown; Belongs to the diacylglycerol/lipid kinase family. YegS lipid kinase subfamily; Contains 1 DAGKc domain; KEGG: mjd:JDM601_1641 diacylglycerol kinase (ATP).


ensembl_gene_id: UJ101_01245
symbol: mdoB
gene_biotype: protein_coding
description:
  Phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase; KEGG: pha:PSHAa2774 phosphoglycerol transferase.


ensembl_gene_id: UJ101_01248
symbol: APD06767.1
gene_biotype: protein_coding
description:
  Histidine kinase; Member of the two-component regulatory system LytS/LytT that probably regulates genes involved in cell wall metabolism. Contains 1 GAF domain; Contains 1 histidine kinase domain; KEGG: scf:Spaf_1335 two-component system, sensor histidine kinase YesM.


ensembl_gene_id: UJ101_01249
symbol: APD06768.1
gene_biotype: protein_coding
description:
  Protein MrkE; May be involved in the regulation of fimbrial expression. Contains 1 HTH LytTR-type DNA-binding domain; Contains 1 response regulatory domain.


ensembl_gene_id: UJ101_01257
symbol: K08303
gene_biotype: protein_coding
description:
  Putative protease; Belongs to the peptidase U32 family; KEGG: wvi:Weevi_0904 putative protease; Acting on peptide bonds (peptidases).


ensembl_gene_id: UJ101_01263
symbol: cysE
gene_biotype: protein_coding
description:
  Serine O-acetyltransferase; Belongs to the MIP18 family; KEGG: mpl:Mpal_1220 serine O-acetyltransferase.


ensembl_gene_id: UJ101_01264
symbol: APD06783.1
gene_biotype: protein_coding
description:
  WAT1-related protein chloroplastic; Belongs to the drug/metabolite transporter (DMT) superfamily. Plant drug/metabolite exporter (P-DME) (TC 2.A.7.4) family; Contains 2 EamA domains.


ensembl_gene_id: UJ101_01266
symbol: dtd|DTD1
gene_biotype: protein_coding
description:
  D-aminoacyl-tRNA deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family.


ensembl_gene_id: UJ101_01268
symbol: APD06787.1
gene_biotype: protein_coding
description:
  23S rRNA pseudouridine(1911/1915/1917) synthase; Responsible for synthesis of pseudouridine from uracil at positions 955, 2504 and 2580 in 23S ribosomal RNA; Belongs to the pseudouridine synthase RluA family; Contains 1 S4 RNA-binding domain; KEGG: lan:Lacal_0560 23S rRNA pseudouridine1911/1915/1917 synthase.


ensembl_gene_id: UJ101_01272
symbol: YARS|tyrS
gene_biotype: protein_coding
description:
  tyrosine--tRNA ligase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily.


ensembl_gene_id: UJ101_01274
symbol: hflK
gene_biotype: protein_coding
description:
  Hypersensitive-induced response protein; KEGG: mad:HP15_2497 membrane protease subunit HflK; Acting on peptide bonds (peptidases).


ensembl_gene_id: UJ101_01275
symbol: gltX
gene_biotype: protein_coding
description:
  glutamate--tRNA(Gln) ligase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.


ensembl_gene_id: UJ101_01276
symbol: ybeY
gene_biotype: protein_coding
description:
  Endoribonuclease YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.


ensembl_gene_id: UJ101_01277
symbol: mnmG
gene_biotype: protein_coding
description:
  tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.


ensembl_gene_id: UJ101_01282
symbol: DPO3D2|holB
gene_biotype: protein_coding
description:
  DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. Belongs to the DnaX/STICHEL family; KEGG: ccm:Ccan_02900 DNA polymerase III subunit delta'.


ensembl_gene_id: UJ101_01283
symbol: APD06802.1
gene_biotype: protein_coding
description:
  Histidine kinase; Member of the two-component regulatory system PhoP/PhoR involved in the alkaline phosphatase genes regulation. PhoR may function as a membrane-associated protein kinase that phosphorylates PhoP in response to environmental signals. Contains 1 histidine kinase domain; Contains 1 PAS (PER-ARNT-SIM) domain; KEGG: efc:EFAU004_01882 two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR.


ensembl_gene_id: UJ101_01284
symbol: K11527
gene_biotype: protein_coding
description:
  Histidine kinase; Member of the two-component regulatory system HssS/HssR involved in intracellular heme homeostasis and tempering of staphylococcal virulence. HssS functions as a heme sensor histidine kinase which is autophosphorylated at a histidine residue and transfers its phosphate group to an aspartate residue of HssR. HssR/HssS activates the expression of hrtAB, an efflux pump, in response to extracellular heme, hemin, hemoglobin or blood (By similarity); Contains 1 HAMP domain; Contains 1 histidine kinase domain; KEGG: syp:SYNPCC7002_A2835 two-component system, unclassified fam [...]


ensembl_gene_id: UJ101_01286
symbol: APD06805.1
gene_biotype: protein_coding
description:
  Methanoproteinis regulatory histidine kinase FilI; Member of the two-component regulatory system FilI/FilRs, which is involved in the regulation of methanogenesis. Autophosphorylates and specifically transfers the phosphoryl group to both FilR1 and FilR2; Could also catalyze the synthesis of the quorum sensing (QS) signal molecules carboxyl-acyl homoserine lactones (AHLs), which regulate the transition of the cellular morphology from short cells to filaments and of the carbon metabolic flux from biomass formation to methane production; Contains 1 HAMP domain; Contains 1 histidine kinas [...]


ensembl_gene_id: UJ101_01287
symbol: ruvC
gene_biotype: protein_coding
description:
  Crossover junction endodeoxyribonuclease; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.


ensembl_gene_id: UJ101_01288
symbol: QARS|glnS
gene_biotype: protein_coding
description:
  glutamine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family; KEGG: cpi:Cpin_0242 glutaminyl-tRNA synthetase.


ensembl_gene_id: UJ101_01293
symbol: rpiB
gene_biotype: protein_coding
description:
  Ribose-5-phosphate isomerase; Belongs to the LacAB/RpiB family; KEGG: cpas:Clopa_4021 ribose 5-phosphate isomerase B.


ensembl_gene_id: UJ101_01302
symbol: pepE
gene_biotype: protein_coding
description:
  Hydrolyzes dipeptides containing N-terminal aspartate residues. May play a role in allowing the cell to use peptide aspartate to spare carbon otherwise required for the synthesis of the aspartate family of amino acids; Belongs to the peptidase S51 family; KEGG: cpi:Cpin_3280 dipeptidase E.


ensembl_gene_id: UJ101_01306
symbol: queD|ptpS|PTS
gene_biotype: protein_coding
description:
  6-pyruvoyltetrahydropterin synthase; Catalyzes the conversion of 7,8-dihydroneopterin triphosphate (H2NTP) to 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) and acetaldehyde; Belongs to the PTPS family. QueD subfamily; KEGG: fjo:Fjoh_0596 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase.


ensembl_gene_id: UJ101_01312
symbol: paaF|echA
gene_biotype: protein_coding
description:
  enoyl-CoA hydratase; Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite. Has high activity toward isobutyryl-CoA. Could be an isobutyryl-CoA dehydrogenase that functions in valine catabolism. Also hydrolyzes 3-hydroxypropanoyl-CoA; Belongs to the enoyl-CoA hydratase/isomerase family; KEGG: pbc:CD58_14595 enoyl-CoA hydratase.


ensembl_gene_id: UJ101_01314
symbol: liuC
gene_biotype: protein_coding
description:
  methylglutaconyl-CoA hydratase; Bifunctional subunit. In the N-terminal sectio; belongs to the enoyl-CoA hydratase/isomerase family; In the central sectio; belongs to the 3-hydroxyacyl- CoA dehydrogenase family; KEGG: asl:Aeqsu_1789 methylglutaconyl-CoA hydratase.


ensembl_gene_id: UJ101_01315
symbol: APD06834.1
gene_biotype: protein_coding
description:
  Protein DETOXIFICATION; Citrate transporter responsible for loading citrate into xylem tissues, which helps facilitate iron transport to shoots. Mediates the citrate release in the apoplastic spaces during plant development allowing iron nutrition between symplastically disconnected tissues ; Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family.


ensembl_gene_id: UJ101_01317
symbol: nadC|QPRT
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide diphosphorylase (carboxylating); Involved in the catabolism of quinolinic acid (QA); Belongs to the NadC/ModD family; KEGG: bul:BW21_3045 nicotinate-nucleotide pyrophosphorylase (carboxylating).


ensembl_gene_id: UJ101_01320
symbol: APD06839.1
gene_biotype: protein_coding
description:
  HTH-type transcriptional regulator Ptr2; Participates in positive as well as negative regulation of transcription. Binds to its own promoter. Contains 1 HTH asnC-type DNA-binding domain.


ensembl_gene_id: UJ101_01323
symbol: egtD
gene_biotype: protein_coding
description:
  L-histidine N(alpha)-methyltransferase; Catalyzes the SAM-dependent triple methylation of the alpha-amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine. Among all the proteinogenic amino acids, only L-histidine is a substrate; Belongs to the methyltransferase superfamily. EgtD family; KEGG: mmc:Mmcs_4879 L-histidine Nalpha-methyltransferase.


ensembl_gene_id: UJ101_01324
symbol: APD06843.1
gene_biotype: protein_coding
description:
  Hercynine oxygenase; Catalyzes the oxidative sulfurization of hercynine (N- alpha,N-alpha,N-alpha-trimethyl-L-histidine) into hercynyl-gamma- L-glutamyl-L-cysteine sulfoxide, a step in the biosynthesis pathway of ergothioneine; Belongs to the EgtB family.


ensembl_gene_id: UJ101_01332
symbol: selO
gene_biotype: protein_coding
description:
  UPF0061 protein; Catalyzes the transfer of adenosine 5'-monophosphate (AMP) to Ser, Thr or Tyr residues of target proteins (AMPylation). Belongs to the SELO family.


ensembl_gene_id: UJ101_01335
symbol: UMPS
gene_biotype: protein_coding
description:
  Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).


ensembl_gene_id: UJ101_01336
symbol: APD06855.1
gene_biotype: protein_coding
description:
  Putative transcriptional regulatory protein YxjL; Probable member of the two-component regulatory system YxjM/YxjL; Contains 1 HTH luxR-type DNA-binding domain; Contains 1 response regulatory domain.


ensembl_gene_id: UJ101_01337
symbol: comP
gene_biotype: protein_coding
description:
  Histidine kinase; Member of the two-component regulatory system UhpB/UhpA involved in the regulation of the uptake of hexose phosphates. UhpB functions as a membrane-associated protein kinase that phosphorylates UhpA in response to environmental signals. Contains 1 histidine kinase domain; KEGG: efq:DR75_1115 two-component system, NarL family, sensor histidine kinase ComP.


ensembl_gene_id: UJ101_01344
symbol: APD06863.1
gene_biotype: protein_coding
description:
  Peptidoglycan-binding protein ArfA; May play a role in ammonia secretion that neutralizes the medium at pH 5.5, although it does not play a direct role in ammonia transport. Binds peptidoglycan. Expression depends on arfB and arfC (By similarity); Belongs to the OmpA family. ArfA(Rv0899) subfamily; Contains 1 BON domain; Contains 1 OmpA-like domain.


ensembl_gene_id: UJ101_01345
symbol: aspA
gene_biotype: protein_coding
description:
  Aspartate ammonia-lyase; Belongs to the class-II fumarase/aspartase family. Aspartase subfamily; KEGG: sgl:SG0303 aspartate ammonia-lyase.


ensembl_gene_id: UJ101_01346
symbol: APD06865.1
gene_biotype: protein_coding
description:
  Dicarboxylate transporter 1, chloroplastic; 2-oxoglutarate/malate translocator that transports carbon skeletons into chloroplasts for net glutamate synthesis. This translocator exchanges malate for internal succinate, fumarate and 2-oxoglutarate but not for aspartate and glutamate. Involved with DIT2 in primary ammonia assimilation and in the re- assimilation of ammonia generated by the photorespiratory pathway. Imports 2-oxoglutarate into plastids as precursor for ammonia assimilation. 2-oxoglutarate is converted to glutamate, the end product of ammonia assimilation, which is exported [...]


ensembl_gene_id: UJ101_01349
symbol: APD06868.1
gene_biotype: protein_coding
description:
  ATPase WRNIP1; Functions as a modulator for initiation or reinitiation events during DNA polymerase delta-mediated DNA synthesis. Has an intrinsic ATPase activity that functions as a sensor of DNA damage or of arrested replication forks and regulates the extent of DNA synthesis (By similarity); Belongs to the AAA ATPase family. RarA/MGS1/WRNIP1 subfamily.


ensembl_gene_id: UJ101_01351
symbol: rutD
gene_biotype: protein_coding
description:
  Uncharacterized protein; Belongs to the DmpD/TodF/XylF esterase family; KEGG: ebi:EbC_11610 aminoacrylate hydrolase; In linear amides.


ensembl_gene_id: UJ101_01356
symbol: asd
gene_biotype: protein_coding
description:
  Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.


ensembl_gene_id: UJ101_01357
symbol: APD06876.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: chz:CHSO_4566 zinc protease; Metalloendopeptidases; Belongs to the peptidase M16 family.


ensembl_gene_id: UJ101_01358
symbol: APD06877.1
gene_biotype: protein_coding
description:
  Two-component response regulator ORR29; Transcriptional activator that binds specific DNA sequence. Functions as a response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. May directly activate some type-A response regulators in response to cytokinins; Belongs to the ARR family. Type-B subfamily; Contains 1 Myb-like GARP DNA-binding domain; Contains 1 response regulatory domain.


ensembl_gene_id: UJ101_01359
symbol: APD06878.1
gene_biotype: protein_coding
description:
  Oxygen sensor histidine kinase NreB; Member of the two-component regulatory system NreB/NreC involved in the control of dissimilatory nitrate/nitrite reduction in response to oxygen. NreB functions as a direct oxygen sensor histidine kinase which is autophosphorylated, in the absence of oxygen, probably at the conserved histidine residue, and transfers its phosphate group probably to a conserved aspartate residue of NreC. NreB/NreC activates the expression of the nitrate (narGHJI) and nitrite (nir) reductase operons, as well as the putative nitrate transporter gene narT (By similarity) [...]


ensembl_gene_id: UJ101_01360
symbol: atoB
gene_biotype: protein_coding
description:
  acetyl-CoA C-acetyltransferase; Belongs to the thiolase family; KEGG: beo:BEH_23580 acetyl-CoA C-acetyltransferase.


ensembl_gene_id: UJ101_01362
symbol: rfbD|rmlD
gene_biotype: protein_coding
description:
  dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.


ensembl_gene_id: UJ101_01363
symbol: APD06882.1
gene_biotype: protein_coding
description:
  Cartilage oligomeric matrix protein; May play a role in the structural integrity of cartilage via its interaction with other extracellular matrix proteins such as the collagens and fibronectin. Can mediate the interaction of chondrocytes with the cartilage extracellular matrix through interaction with cell surface integrin receptors. Could play a role in the pathogenesis of osteoarthritis. Potent suppressor of apoptosis in both primary chondrocytes and transformed cells. Suppresses apoptosis by blocking the activation of caspase-3 and by inducing the IAP family of survival proteins (BI [...]


ensembl_gene_id: UJ101_01364
symbol: PARS|proS
gene_biotype: protein_coding
description:
  proline--tRNA ligase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro).


ensembl_gene_id: UJ101_01368
symbol: hflX
gene_biotype: protein_coding
description:
  GTPase HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.


ensembl_gene_id: UJ101_01369
symbol: ppc
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle.


ensembl_gene_id: UJ101_01373
symbol: APD06892.1
gene_biotype: protein_coding
description:
  Part of the ABC transporter complex TagGH involved in teichoic acids export. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Teichoic acids exporter (TC 3.A.1.104.1) family; Contains 1 ABC transporter domain.


ensembl_gene_id: UJ101_01374
symbol: APD06893.1
gene_biotype: protein_coding
description:
  ABC transporter permease protein NatB; Part of an ABC transporter that catalyzes ATP-dependent electrogenic sodium extrusion.


ensembl_gene_id: UJ101_01375
symbol: tadA
gene_biotype: protein_coding
description:
  tRNA(adenine(34)) deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: UJ101_01379
symbol: APD06898.1
gene_biotype: protein_coding
description:
  Acylaminoacyl-peptidase; Exopeptidase that catalyzes the removal of dipeptide units (NH2-P2-P1- or -P1'-P2'-COOH) from the free amino or carboxy termini. Prefers substrates composed of bulky, hydrophobic amino acids at P1 and P1' positions. Has endopeptidase activity on N- terminally blocked peptide derivatives which contain aromatic amino acid residue at the P1 position. Exopeptidase activity is much higher than its endopeptidase activity; Belongs to the peptidase S9 family; KEGG: bra:BRADO3729 acylaminoacyl-peptidase.


ensembl_gene_id: UJ101_01381
symbol: greA
gene_biotype: protein_coding
description:
  Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.


ensembl_gene_id: UJ101_01383
symbol: APD06902.1
gene_biotype: protein_coding
description:
  Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation; Belongs to the ABC transporter superfamily. Lipid exporter (TC 3.A.1.106) family; Contains 1 ABC transmembrane type-1 domain; Contains 1 ABC transporter domain.


ensembl_gene_id: UJ101_01398
symbol: APD06917.1
gene_biotype: protein_coding
description:
  Cytochrome c-type protein NrfH; Subunit of the nitrite reductase complex that mediates electron transfer from quinol to the catalytic subunit.


ensembl_gene_id: UJ101_01399
symbol: nrfA
gene_biotype: protein_coding
description:
  Nitrite reductase (cytochrome; Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process; Belongs to the cytochrome c-552 family; KEGG: doi:FH5T_18040 nitrite reductase (cytochrome c-552).


ensembl_gene_id: UJ101_01402
symbol: APD06921.1
gene_biotype: protein_coding
description:
  Cytochrome c bioproteinis protein CcsA; Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment; Belongs to the CcmF/CycK/Ccl1/NrfE/CcsA family.


ensembl_gene_id: UJ101_01407
symbol: APD06926.1
gene_biotype: protein_coding
description:
  P-hydroxybenzoic acid efflux pump subunit AaeA; Forms an efflux pump with AaeB; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: UJ101_01411
symbol: APD06930.1
gene_biotype: protein_coding
description:
  uvrABC system protein; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.


ensembl_gene_id: UJ101_01412
symbol: APD06931.1
gene_biotype: protein_coding
description:
  HTH-type transcriptional regulator ChbR; Dual-function repressor/activator of the chbBCARFG operon. In the absence of the inducing sugar chitobiose, together with NagC, represses the chbBCARFG operon for the uptake and metabolism of chitobiose. In association with Crp, and probably in the presence of chitobiose 6-phosphate, induces the transcription of the chbBCARFG operon; Contains 1 HTH araC/xylS-type DNA-binding domain.


ensembl_gene_id: UJ101_01417
symbol: APD06936.1
gene_biotype: protein_coding
description:
  Outer membrane protein; Required for the action of colicins K and L and for the stabilization of mating aggregates in conjugation. Serves as a receptor for a number of T-even like phages. Also acts as a porin with low permeability that allows slow penetration of small solutes (By similarity); Belongs to the OmpA family; Contains 1 OmpA-like domain.


ensembl_gene_id: UJ101_01421
symbol: FARSA|pheS
gene_biotype: protein_coding
description:
  phenylalanine--tRNA ligase; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily; KEGG: fco:FCOL_13010 phenylalanyl-tRNA synthetase alpha chain.


ensembl_gene_id: UJ101_01422
symbol: APD06941.1
gene_biotype: protein_coding
description:
  Putative response regulatory protein; Contains 1 HTH LytTR-type DNA-binding domain; Contains 1 response regulatory domain.


ensembl_gene_id: UJ101_01423
symbol: K02478
gene_biotype: protein_coding
description:
  Histidine kinase; Member of the two-component regulatory system LytS/LytT that probably regulates genes involved in cell wall metabolism. Contains 1 GAF domain; Contains 1 histidine kinase domain; KEGG: obt:OPIT5_19415 two-component system, LytT family, sensor kinase.


ensembl_gene_id: UJ101_01425
symbol: APD06944.1
gene_biotype: protein_coding
description:
  Sodium/glucose cotransporter; Actively transports glucose into cells by Na(+) cotransport; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.


ensembl_gene_id: UJ101_01430
symbol: APD06949.1
gene_biotype: protein_coding
description:
  Protein RhsB; Rhs elements have a nonessential function. They may play an important role in the natural ecology of the cell. Belongs to the RHS family.


ensembl_gene_id: UJ101_01435
symbol: proC
gene_biotype: protein_coding
description:
  Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.


ensembl_gene_id: UJ101_01437
symbol: APD06956.1
gene_biotype: protein_coding
description:
  Required for nicotinamide riboside transport across the inner membrane; Belongs to the nicotinamide ribonucleoside (NR) uptake permease (TC 4.B.1) family.


ensembl_gene_id: UJ101_01438
symbol: tag
gene_biotype: protein_coding
description:
  DNA-3-methyladenine glycosylase I; Catalyzes the synthesis of GMP from XMP; Contains 1 glutamine amidotransferase type-1 domain; Contains 1 GMPS ATP-PPase (ATP pyrophosphatase) domain; Contains 3 N-acetyltransferase domains; KEGG: cbu:CBU_0383 DNA-3-methyladenine glycosylase I.


ensembl_gene_id: UJ101_01439
symbol: nadA
gene_biotype: protein_coding
description:
  Quinolinate synthase; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.


ensembl_gene_id: UJ101_01443
symbol: ansA|ansB
gene_biotype: protein_coding
description:
  Asparaginase; Belongs to the asparaginase 1 family; Contains 1 asparaginase/glutaminase domain; KEGG: pro:HMPREF0669_00543 L-asparaginase.


ensembl_gene_id: UJ101_01450
symbol: menB
gene_biotype: protein_coding
description:
  1,4-dihydroxy-2-naphthoyl-CoA synthase; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA); Belongs to the enoyl-CoA hydratase/isomerase family. MenB subfamily; KEGG: pgb:H744_2c2115 naphthoate synthase.


ensembl_gene_id: UJ101_01453
symbol: APD06971.1
gene_biotype: protein_coding
description:
  Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.


ensembl_gene_id: UJ101_01455
symbol: rseP
gene_biotype: protein_coding
description:
  Putative zinc metalloprotease; Belongs to the peptidase M50B family; Contains 1 PDZ (DHR) domain; KEGG: wvi:Weevi_1162 regulator of sigma E protease; Metalloendopeptidases.


ensembl_gene_id: UJ101_01461
symbol: clpB
gene_biotype: protein_coding
description:
  Chaperone protein ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.


ensembl_gene_id: UJ101_01462
symbol: amiE
gene_biotype: protein_coding
description:
  Amidase; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln); Belongs to the amidase family. GatA subfamily; KEGG: paeh:H70357_14290 amidase.


ensembl_gene_id: UJ101_01470
symbol: APD06986.1
gene_biotype: protein_coding
description:
  Hdr-like menaquinol oxidoreductase iron-sulfur subunit; Has menaquinol-oxidizing activity. HmeA, HmeB and HmeE subunits may together catalyze electron transfer from menaquinol to cytochrome c. Contains 1 4Fe-4S ferredoxin-type domain.


ensembl_gene_id: UJ101_01475
symbol: APD06991.1
gene_biotype: protein_coding
description:
  Thrombospondin-4; Adhesive glycoprotein that mediates cell-to-cell and cell-to-matrix interactions and may be involved in various processes including cellular proliferation, migration, adhesion and attachment. May play a role in ER stress response (By similarity). May participate in the genesis and function of cardiac and skeletal muscle; Belongs to the thrombospondin family; Contains 4 EGF-like domains; Contains 1 laminin G-like domain; Contains 1 TSP C-terminal (TSPC) domain; Contains 8 TSP type-3 repeats.


ensembl_gene_id: UJ101_01480
symbol: rbfA
gene_biotype: protein_coding
description:
  Ribosome-binding factor; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.


ensembl_gene_id: UJ101_01481
symbol: APD06997.1
gene_biotype: protein_coding
description:
  Lipoprotein-releasing system transmembrane protein LolC; Part of an ATP-dependent transport system responsible for the release of lipoproteins targeted to the outer membrane from the inner membrane. Such a release is dependent of the sorting-signal (absence of an Asp at position 2 of the mature lipoprotein) and of LolA (By similarity); Belongs to the ABC-4 integral membrane protein family. LolC/E subfamily.


ensembl_gene_id: UJ101_01488
symbol: APD07004.1
gene_biotype: protein_coding
description:
  Activator of the cell wall hydrolases AmiA and AmiB. Required for septal murein cleavage and daughter cell separation during cell division. In vitro, exhibits weak endoproteolytic activity on beta-casein; Belongs to the peptidase M23B family.


ensembl_gene_id: UJ101_01491
symbol: upp|UPRT
gene_biotype: protein_coding
description:
  Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate; Belongs to the UPRTase family; KEGG: pbt:ING2E5B_2092 uracil phosphoribosyltransferase.


ensembl_gene_id: UJ101_01492
symbol: APD07008.1
gene_biotype: protein_coding
description:
  This receptor binds the ferrichrome-iron ligand. It interacts with the TonB protein, which is responsible for energy coupling of the ferrichrome-promoted iron transport system. Acts as a receptor for bacteriophage T5 as well as T1, phi80 and colicin M. Binding of T5 triggers the opening of a high conductance ion channel. Can also transport the antibiotic albomycin; Belongs to the TonB-dependent receptor family.


ensembl_gene_id: UJ101_01494
symbol: APD07010.1
gene_biotype: protein_coding
description:
  Specifically methylates the ribose of guanosine 2251 in 23S rRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. RlmB subfamily.


ensembl_gene_id: UJ101_01495
symbol: APD07011.1
gene_biotype: protein_coding
description:
  6-pyruvoyltetrahydropterin synthase; Involved in the biosynthesis of tetrahydrobiopterin, an essential cofactor of aromatic amino acid hydroxylases. Catalyzes the transformation of 7,8-dihydroneopterin triphosphate into 6- pyruvoyl tetrahydropterin; Belongs to the PTPS family; KEGG: mlt:VC82_830 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase.


ensembl_gene_id: UJ101_01498
symbol: phhA|PAH
gene_biotype: protein_coding
description:
  Phenylalanine 4-monooxygenase; Belongs to the biopterin-dependent aromatic amino acid hydroxylase family; KEGG: fjo:Fjoh_1902 phenylalanine-4-hydroxylase.


ensembl_gene_id: UJ101_01500
symbol: AASS
gene_biotype: protein_coding
description:
  Saccharopine dehydrogenase (NADP(+), L-lysine-forming); Bifunctional enzyme that catalyzes the first two steps in lysine degradation. The N-terminal and the C-terminal contain lysine-oxoglutarate reductase and saccharopine dehydrogenase activity, respectively. Negatively regulates free Lys accumulation in seeds; In the N-terminal sectio; belongs to the AlaDH/PNT family; In the C-terminal sectio; belongs to the saccharopine dehydrogenase family; KEGG: cel:CELE_R02D3.1 alpha-aminoadipic semialdehyde synthase.


ensembl_gene_id: UJ101_01502
symbol: APD07018.1
gene_biotype: protein_coding
description:
  Putative ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily; Contains 1 ABC transporter domain.


ensembl_gene_id: UJ101_01506
symbol: rimP
gene_biotype: protein_coding
description:
  Ribosome maturation factor RimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.


ensembl_gene_id: UJ101_01507
symbol: nusA
gene_biotype: protein_coding
description:
  Transcription termination/antitermination protein NusA; Participates in both transcription termination and antitermination.


ensembl_gene_id: UJ101_01508
symbol: infB
gene_biotype: protein_coding
description:
  Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.


ensembl_gene_id: UJ101_01521
symbol: dnaG
gene_biotype: protein_coding
description:
  DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Belongs to the DnaG primase family.


ensembl_gene_id: UJ101_01522
symbol: mrcA
gene_biotype: protein_coding
description:
  Penicillin-binding protein 1A; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross-linking of the peptide subunits) (By similarity); In the N-terminal sectio; belongs to the glycosyltransferase 51 family; In the C-terminal sectio; belongs to the transpeptidase family; KEGG: pbt:ING2E5B_0320 penicillin-binding protein 1A; Hexosyltransferases.


ensembl_gene_id: UJ101_01524
symbol: K03725
gene_biotype: protein_coding
description:
  Stage 0 sporulation protein YaaT; Essential for the phosphorelay during initiation of sporulation. May control the level of phosphorylated spo0A through spo0E activity during sporulation; Contains 1 PSP1 C-terminal domain; KEGG: mru:mru_1319 archaea-specific helicase; In phosphorus-containing anhydrides.


ensembl_gene_id: UJ101_01534
symbol: APD07050.1
gene_biotype: protein_coding
description:
  Probably functions as a sodium/glutamine symporter for glutamine uptake; Belongs to the sodium:alanine (SAF) symporter family.


ensembl_gene_id: UJ101_01535
symbol: APD07051.1
gene_biotype: protein_coding
description:
  Methionine gamma-lyase; Transforms O-acetylhomoserine into homocysteine and O- acetylserine into cysteine. Belongs to the trans-sulfuration enzymes family; KEGG: gfo:GFO_2175 methionine-gamma-lyase.


ensembl_gene_id: UJ101_01538
symbol: gdhA
gene_biotype: protein_coding
description:
  Glutamate dehydrogenase (NADP(+)); Belongs to the Glu/Leu/Phe/Val dehydrogenases family; KEGG: acd:AOLE_14205 glutamate dehydrogenase (NADP+).


ensembl_gene_id: UJ101_01540
symbol: glnA|GLUL
gene_biotype: protein_coding
description:
  Glutamate--ammonia ligase; Belongs to the glutamine synthetase family. Type 3 subfamily; KEGG: nko:Niako_4718 glutamine synthetase.


ensembl_gene_id: UJ101_01541
symbol: prfA
gene_biotype: protein_coding
description:
  Peptide chain release factor; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.


ensembl_gene_id: UJ101_01543
symbol: cysK
gene_biotype: protein_coding
description:
  Belongs to the cysteine synthase/cystathionine beta- synthase family. Highly divergent; KEGG: ske:Sked_06040 cysteine synthase A.


ensembl_gene_id: UJ101_01548
symbol: APD07064.1
gene_biotype: protein_coding
description:
  Sodium/alanine symporter AgcS; Probably functions as a sodium/L- and D-alanine symporter for alanine uptake; Belongs to the sodium:alanine (SAF) symporter family.


ensembl_gene_id: UJ101_01550
symbol: APD07066.1
gene_biotype: protein_coding
description:
  glutaryl-CoA dehydrogenase (ETF); Has greatest activity toward short branched chain acyl- CoA derivative such as (s)-2-methylbutyryl-CoA, isobutyryl-CoA, and 2-methylhexanoyl-CoA as well as toward short straight chain acyl-CoAs such as butyryl-CoA and hexanoyl-CoA. Can use valproyl- CoA as substrate and may play a role in controlling the metabolic flux of valproic acid in the development of toxicity of this agent (By similarity); Belongs to the acyl-CoA dehydrogenase family; KEGG: avn:Avin_24930 glutaryl-CoA dehydrogenase.


ensembl_gene_id: UJ101_01553
symbol: rpsL
gene_biotype: protein_coding
description:
  30S ribosomal protein S12, chloroplastic; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.


ensembl_gene_id: UJ101_01554
symbol: rpsG
gene_biotype: protein_coding
description:
  30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.


ensembl_gene_id: UJ101_01555
symbol: fusA
gene_biotype: protein_coding
description:
  Elongation factor; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.


ensembl_gene_id: UJ101_01556
symbol: rpsJ
gene_biotype: protein_coding
description:
  30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.


ensembl_gene_id: UJ101_01557
symbol: rplC
gene_biotype: protein_coding
description:
  50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.


ensembl_gene_id: UJ101_01559
symbol: rplW
gene_biotype: protein_coding
description:
  50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.


ensembl_gene_id: UJ101_01560
symbol: rplB
gene_biotype: protein_coding
description:
  50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.


ensembl_gene_id: UJ101_01561
symbol: rpsS
gene_biotype: protein_coding
description:
  30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.


ensembl_gene_id: UJ101_01562
symbol: rplV
gene_biotype: protein_coding
description:
  50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.


ensembl_gene_id: UJ101_01563
symbol: rpsC
gene_biotype: protein_coding
description:
  30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.


ensembl_gene_id: UJ101_01564
symbol: rplP
gene_biotype: protein_coding
description:
  50S ribosomal protein L16, chloroplastic; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.


ensembl_gene_id: UJ101_01566
symbol: rpsQ
gene_biotype: protein_coding
description:
  30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.


ensembl_gene_id: UJ101_01567
symbol: rplN
gene_biotype: protein_coding
description:
  50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.


ensembl_gene_id: UJ101_01568
symbol: rplX
gene_biotype: protein_coding
description:
  50S ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.


ensembl_gene_id: UJ101_01569
symbol: rplE
gene_biotype: protein_coding
description:
  50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.


ensembl_gene_id: UJ101_01570
symbol: rpsN
gene_biotype: protein_coding
description:
  30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.


ensembl_gene_id: UJ101_01571
symbol: rpsH
gene_biotype: protein_coding
description:
  30S ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.


ensembl_gene_id: UJ101_01572
symbol: rplF
gene_biotype: protein_coding
description:
  50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.


ensembl_gene_id: UJ101_01573
symbol: rplR
gene_biotype: protein_coding
description:
  50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.


ensembl_gene_id: UJ101_01574
symbol: rpsE
gene_biotype: protein_coding
description:
  30S ribosomal protein; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.


ensembl_gene_id: UJ101_01576
symbol: rplO
gene_biotype: protein_coding
description:
  50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.


ensembl_gene_id: UJ101_01577
symbol: secY
gene_biotype: protein_coding
description:
  Protein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.


ensembl_gene_id: UJ101_01578
symbol: infA
gene_biotype: protein_coding
description:
  Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.


ensembl_gene_id: UJ101_01580
symbol: rpsM
gene_biotype: protein_coding
description:
  30S ribosomal protein S13, chloroplastic; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.


ensembl_gene_id: UJ101_01581
symbol: rpsK
gene_biotype: protein_coding
description:
  30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.


ensembl_gene_id: UJ101_01582
symbol: rpsD
gene_biotype: protein_coding
description:
  30S ribosomal protein S4, chloroplastic; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.


ensembl_gene_id: UJ101_01583
symbol: rpoA
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: UJ101_01586
symbol: ENO|eno
gene_biotype: protein_coding
description:
  Phosphopyruvate hydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.


ensembl_gene_id: UJ101_01593
symbol: K01436
gene_biotype: protein_coding
description:
  Putative di- and tripeptidase DUG2; Component of the GSH degradosomal complex involved in the degradation of glutathione (GSH) and other peptides containing a gamma-glu-X bond; Belongs to the peptidase M20A family; Contains 6 WD repeats; KEGG: tth:TTC0133 amidohydrolase; In linear amides.


ensembl_gene_id: UJ101_01594
symbol: APD07110.1
gene_biotype: protein_coding
description:
  Globin-coupled histidine kinase; Member of the two-component regulatory system GcHK/Anae109_2439. Autophosphorylates in response to oxygen availability, and then transfers the phosphate group to a conserved Asp residue in the receiver domains of the cognate response regulator Anae109_2439, resulting in its activation; Contains 1 histidine kinase domain; KEGG: sru:SRU_1826 UJ101; Phosphotransferases with a nitrogenous group as acceptor.


ensembl_gene_id: UJ101_01595
symbol: APD07111.1
gene_biotype: protein_coding
description:
  Energy-dependent uptake of glycine betaine in response to high salinity; Belongs to the BCCT transporter (TC 2.A.15) family.


ensembl_gene_id: UJ101_01599
symbol: trmH
gene_biotype: protein_coding
description:
  tRNA (guanosine(18)-2'-O)-methyltransferase; Catalyzes the 2'-O methylation of guanosine at position 18 in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: UJ101_01601
symbol: hemH|FECH
gene_biotype: protein_coding
description:
  Protoporphyrin ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.


ensembl_gene_id: UJ101_01604
symbol: rimL
gene_biotype: protein_coding
description:
  Putative N-acetyltransferase. May act on ribosomal proteins (Potential); Belongs to the acetyltransferase family; Contains 1 N-acetyltransferase domain; KEGG: win:WPG_2773 ribosomal-protein-serine acetyltransferase; Transferring groups other than amino-acyl groups.


ensembl_gene_id: UJ101_01605
symbol: hemE|UROD
gene_biotype: protein_coding
description:
  Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.


ensembl_gene_id: UJ101_01607
symbol: APD07123.1
gene_biotype: protein_coding
description:
  tRNA pseudouridine(55) synthase; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.


ensembl_gene_id: UJ101_01608
symbol: bacA
gene_biotype: protein_coding
description:
  Undecaprenyl-diphosphate phosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.


ensembl_gene_id: UJ101_01610
symbol: APD07126.1
gene_biotype: protein_coding
description:
  Cell division protein FtsX; Required for cell division and gliding motility. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.


ensembl_gene_id: UJ101_01611
symbol: APD07127.1
gene_biotype: protein_coding
description:
  8-oxo-dGTP diphosphatase; Belongs to the Nudix hydrolase family. NudF subfamily; Contains 1 nudix hydrolase domain; KEGG: mst:Msp_1534 8-oxo-dGTP diphosphatase.


ensembl_gene_id: UJ101_01612
symbol: glmS|GFPT
gene_biotype: protein_coding
description:
  Glutamine--fructose-6-phosphate transaminase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.


ensembl_gene_id: UJ101_01614
symbol: APD07130.1
gene_biotype: protein_coding
description:
  Starch synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose; Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily; KEGG: osp:Odosp_3133 starch synthase.


ensembl_gene_id: UJ101_01615
symbol: panC
gene_biotype: protein_coding
description:
  Pantoate--beta-alanine ligase (AMP-forming); Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.


ensembl_gene_id: UJ101_01616
symbol: panD
gene_biotype: protein_coding
description:
  Aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.


ensembl_gene_id: UJ101_01619
symbol: atpB
gene_biotype: protein_coding
description:
  ATP synthase subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.


ensembl_gene_id: UJ101_01620
symbol: atpE
gene_biotype: protein_coding
description:
  ATP synthase subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: UJ101_01621
symbol: atpF
gene_biotype: protein_coding
description:
  ATP synthase subunit; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.


ensembl_gene_id: UJ101_01622
symbol: atpH
gene_biotype: protein_coding
description:
  ATP synthase subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: UJ101_01623
symbol: ATPF1A|atpA
gene_biotype: protein_coding
description:
  H(+)-transporting two-sector ATPase; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.


ensembl_gene_id: UJ101_01624
symbol: atpG
gene_biotype: protein_coding
description:
  ATP synthase gamma chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.


ensembl_gene_id: UJ101_01625
symbol: kshB
gene_biotype: protein_coding
description:
  3-ketosteroid 9-alpha-monooxygenase; Component of 1,2-phenylacetyl-CoA epoxidase multicomponent enzyme system which catalyzes the reduction of phenylacetyl-CoA (PA-CoA) to form 1,2-epoxyphenylacetyl-CoA. The subunit E is a reductase with a preference for NADPH and FAD, capable of reducing cytochrome c; In the N-terminal sectio; belongs to the FAD-binding oxidoreductase type 6 family; Contains 1 2Fe-2S ferredoxin-type domain; Contains 1 FAD-binding FR-type domain; KEGG: pre:PCA10_43650 3-ketosteroid 9alpha-monooxygenase subunit B.


ensembl_gene_id: UJ101_01628
symbol: APD07144.1
gene_biotype: protein_coding
description:
  Choline monooxygenase; Degradation of benzoate to 2-hydro-1,2-dihydroxybenzoate (DHB). Belongs to the bacterial ring-hydroxylating dioxygenase alpha subunit family; Contains 1 Rieske domain; KEGG: vag:N646_3147 choline monooxygenase.


ensembl_gene_id: UJ101_01632
symbol: APD07148.1
gene_biotype: protein_coding
description:
  HTH-type transcriptional regulator AlsR; Regulates the expression of the alsSD operon for acetoin biosynthesis. Contains 1 HTH lysR-type DNA-binding domain; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: UJ101_01633
symbol: hutH|HAL
gene_biotype: protein_coding
description:
  Histidine ammonia-lyase; Belongs to the PAL/histidase family; KEGG: phe:Phep_1335 histidine ammonia-lyase.


ensembl_gene_id: UJ101_01637
symbol: APD07153.1
gene_biotype: protein_coding
description:
  Carbonate dehydratase; Belongs to the SLC26A/SulP transporter (TC 2.A.53) family; Contains 1 STAS domain; KEGG: lbi:LEPBI_I1695 carbonic anhydrase.


ensembl_gene_id: UJ101_01643
symbol: APD07159.1
gene_biotype: protein_coding
description:
  Putative oxidoreductase YrpG; Belongs to the aldo/keto reductase family. Aldo/keto reductase 2 subfamily; KEGG: ret:RHE_PE00404 UJ101; With NAD(+) or NADP(+) as acceptor.


ensembl_gene_id: UJ101_01645
symbol: ACO|acnA
gene_biotype: protein_coding
description:
  Aconitate hydratase; Has no detectable activity towards cis-acontiate or cis- homoaconitate; Belongs to the aconitase/IPM isomerase family; KEGG: gap:GAPWK_2410 aconitate hydratase.


ensembl_gene_id: UJ101_01647
symbol: APD07163.1
gene_biotype: protein_coding
description:
  Vacuolar phosphate transporter that probably exports phosphate from the vacuolar lumen to the cytosol; Belongs to the CitM (TC 2.A.11) transporter family; Contains 1 SPX domain.


ensembl_gene_id: UJ101_01654
symbol: rnpA
gene_biotype: protein_coding
description:
  Ribonuclease P; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.


ensembl_gene_id: UJ101_01656
symbol: DPO4|dinB
gene_biotype: protein_coding
description:
  DNA-directed DNA polymerase; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.


ensembl_gene_id: UJ101_01660
symbol: APD07176.1
gene_biotype: protein_coding
description:
  Prolyl oligopeptidase; Cleaves peptide bonds on the C-terminal side of prolyl residues within peptides that are up to approximately 30 amino acids long. Has an absolute requirement for an X-Pro bond in the trans configuration immediately preceding the Pro-Y scissible bond. Belongs to the peptidase S9A family; KEGG: vni:VIBNI_B1782 prolyl oligopeptidase.


ensembl_gene_id: UJ101_01661
symbol: APD07177.1
gene_biotype: protein_coding
description:
  Adenylate cyclase; Involved in the hydrolysis of the beta-gamma- phosphoanhydride linkage of triphosphate-containing substrates (inorganic or nucleoside-linked). Catalyzes vigorously the hydrolysis of inorganic triphosphate (PPPi), however it can also catalyze the hydrolysis of ATP to ADP and phosphate. It can use ribonucleotides such as GTP, CTP, or UTP and deoxynucleotides such as dATP, dGTP, dCTP, and dTTP; Contains 1 CYTH domain; KEGG: har:HEAR1785 adenylate cyclase.


ensembl_gene_id: UJ101_01662
symbol: MTHFS
gene_biotype: protein_coding
description:
  KEGG: zpr:ZPR_0180 5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.


ensembl_gene_id: UJ101_01665
symbol: APD07181.1
gene_biotype: protein_coding
description:
  Carbonate dehydratase; Reversible hydration of carbon dioxide. Belongs to the alpha-carbonic anhydrase family; KEGG: nde:NIDE1449 carbonic anhydrase.


ensembl_gene_id: UJ101_01666
symbol: alr
gene_biotype: protein_coding
description:
  Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.


ensembl_gene_id: UJ101_01669
symbol: rsmI-2
gene_biotype: protein_coding
description:
  16S rRNA (cytidine(1402)-2'-O)-methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.


ensembl_gene_id: UJ101_01670
symbol: recJ
gene_biotype: protein_coding
description:
  Putative single-stranded-DNA-specific exonuclease (By similarity). RecA thread formation during DNA double-strand break repair requires RecJ or AadAB; Belongs to the RecJ family; Contains 1 OB DNA-binding domain; KEGG: wvi:Weevi_1278 single-stranded-DNA-specific exonuclease; Acting on ester bonds.


ensembl_gene_id: UJ101_01671
symbol: APD07187.1
gene_biotype: protein_coding
description:
  uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.


ensembl_gene_id: UJ101_01673
symbol: APD07189.1
gene_biotype: protein_coding
description:
  Dolichyl-phosphate beta-D-mannosyltransferase; Transfers mannose from GDP-mannose to lipid acceptors to form polyprenol monophosphomannose (PPM; catalytic activity in vitro is enhanced by Lnt (AC A0QZ13). PMM is an alkai-stable sugar donor which adds mannose-phosphate residues to triacylated-PIM2, eventually leading to generation of the cell wall glycolipid lipoglycan modulins lipoarabinomannan (LAM) and lipomannan (LM) (By similarity); Belongs to the glycosyltransferase 2 family; KEGG: doi:FH5T_11420 dolichol-phosphate mannosyltransferase.


ensembl_gene_id: UJ101_01675
symbol: dxs
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.


ensembl_gene_id: UJ101_01676
symbol: FBP|fbp
gene_biotype: protein_coding
description:
  Fructose-bisphosphatase; Belongs to the FBPase class 1 family; KEGG: tig:THII_0214 fructose-1,6-bisphosphatase I.


ensembl_gene_id: UJ101_01680
symbol: mscL
gene_biotype: protein_coding
description:
  Large-conductance mechanosensitive channel; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell.


ensembl_gene_id: UJ101_01682
symbol: pgmB
gene_biotype: protein_coding
description:
  Beta-phosphoglucomutase; Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress; Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family; KEGG: psi:S70_05680 beta-phosphoglucomutase.


ensembl_gene_id: UJ101_01683
symbol: lgt|umpA
gene_biotype: protein_coding
description:
  Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.


ensembl_gene_id: UJ101_01684
symbol: thrC
gene_biotype: protein_coding
description:
  Threonine synthase; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine; Belongs to the threonine synthase family; KEGG: pru:PRU_1018 threonine synthase.


ensembl_gene_id: UJ101_01685
symbol: thrB1
gene_biotype: protein_coding
description:
  Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily.


ensembl_gene_id: UJ101_01686
symbol: thrA
gene_biotype: protein_coding
description:
  Aspartate kinase; In the N-terminal sectio; belongs to the aspartokinase family; In the C-terminal sectio; belongs to the homoserine dehydrogenase family; Contains 2 ACT domains; KEGG: bth:BT_2403 bifunctional aspartokinase / homoserine dehydrogenase 1.


ensembl_gene_id: UJ101_01687
symbol: APD07203.1
gene_biotype: protein_coding
description:
  ATP-binding RNA helicase involved in the biogenesis of 60S ribosomal subunits and is required for the normal formation of 25S and 5.8S rRNAs; Belongs to the DEAD box helicase family. DDX56/DBP9 subfamily; Contains 1 helicase ATP-binding domain; Contains 1 helicase C-terminal domain; KEGG: pom:MED152_02810 ATP-dependent RNA helicase DeaD.


ensembl_gene_id: UJ101_01691
symbol: APD07207.1
gene_biotype: protein_coding
description:
  Ribosome hibernation promoting factor; During stationary phase, promotes and stabilizes dimerization of 70S ribosomes, leading to the formation of inactive 100S ribosomes; Belongs to the Hpf/RaiA ribosome-associated protein family. Hpf subfamily.


ensembl_gene_id: UJ101_01697
symbol: tuf
gene_biotype: protein_coding
description:
  Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.


ensembl_gene_id: UJ101_01699
symbol: nusG
gene_biotype: protein_coding
description:
  Transcription termination/antitermination protein NusG; Participates in transcription elongation, termination and antitermination.


ensembl_gene_id: UJ101_01700
symbol: rplK
gene_biotype: protein_coding
description:
  50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.


ensembl_gene_id: UJ101_01701
symbol: rplA
gene_biotype: protein_coding
description:
  50S ribosomal protein L1, chloroplastic; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.


ensembl_gene_id: UJ101_01702
symbol: rplJ
gene_biotype: protein_coding
description:
  50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.


ensembl_gene_id: UJ101_01703
symbol: rplL
gene_biotype: protein_coding
description:
  50S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.


ensembl_gene_id: UJ101_01711
symbol: APD07222.1
gene_biotype: protein_coding
description:
  DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair; Belongs to the ATP-dependent DNA ligase family.


ensembl_gene_id: UJ101_01712
symbol: DNMT1|dcm
gene_biotype: protein_coding
description:
  DNA (cytosine-5-)-methyltransferase; This methylase recognizes the double-stranded sequence GTGCAC, causes specific methylation on C-? on both strands, and protects the DNA from cleavage by the ApaLI endonuclease. Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family; Contains 1 SAM-dependent MTase C5-type domain; KEGG: bth:BT_4754 DNA (cytosine-5)-methyltransferase 1.


ensembl_gene_id: UJ101_01717
symbol: rlmN
gene_biotype: protein_coding
description:
  23S rRNA (adenine(2503)-C(2))-methyltransferase; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family.


ensembl_gene_id: UJ101_01720
symbol: queA
gene_biotype: protein_coding
description:
  S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).


ensembl_gene_id: UJ101_01721
symbol: yfiC|trmX
gene_biotype: protein_coding
description:
  tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase; Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC).


ensembl_gene_id: UJ101_01722
symbol: APD07233.1
gene_biotype: protein_coding
description:
  Putative sensor histidine kinase NtrY-like; Member of the two-component regulatory system RBE_0470/RBE_0312; Contains 1 HAMP domain; Contains 1 histidine kinase domain; KEGG: coc:Coch_1190 UJ101; Phosphotransferases with a nitrogenous group as acceptor.


ensembl_gene_id: UJ101_01723
symbol: ribE|RIB5
gene_biotype: protein_coding
description:
  Riboflavin synthase; Catalyzes the dismutation of two molecules of 6,7- dimethyl-8-ribityllumazine, resulting in the formation of riboflavin and 5-amino-6-(D-ribitylamino)uracil; Contains 2 lumazine-binding repeats; KEGG: frf:LO80_06725 riboflavin synthase.


ensembl_gene_id: UJ101_01724
symbol: pdxA
gene_biotype: protein_coding
description:
  4-hydroxythreonine-4-phosphate dehydrogenase; Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP); Belongs to the PdxA family; KEGG: cao:Celal_1343 4-hydroxythreonine-4-phosphate dehydrogenase.


ensembl_gene_id: UJ101_01728
symbol: oadA
gene_biotype: protein_coding
description:
  Oxaloacetate decarboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: UJ101_01729
symbol: accC
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: UJ101_01730
symbol: APD07241.1
gene_biotype: protein_coding
description:
  Iron-dependent repressor IdeR; Metal-dependent DNA-binding protein that controls transcription of many genes involved in iron metabolism; Contains 1 HTH dtxR-type DNA-binding domain.


ensembl_gene_id: UJ101_01732
symbol: APD07243.1
gene_biotype: protein_coding
description:
  Zinc-binding lipoprotein AdcA; Part of the ATP-driven transport system AdcABC for zinc. Required for transformability (By similarity); Belongs to the bacterial solute-binding protein 9 family.


ensembl_gene_id: UJ101_01733
symbol: pstB
gene_biotype: protein_coding
description:
  Phosphate-transporting ATPase; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family; Contains 1 ABC transporter domain; KEGG: vvu:VV1_0461 phosphate transport system ATP-binding protein.


ensembl_gene_id: UJ101_01734
symbol: APD07245.1
gene_biotype: protein_coding
description:
  Manganese transport system membrane protein MntC; This protein is probably a component of a manganese permease, a binding protein-dependent, ATP-driven transport system; Belongs to the ABC-3 integral membrane protein family.


ensembl_gene_id: UJ101_01735
symbol: APD07246.1
gene_biotype: protein_coding
description:
  Part of an ATP-driven transport system TroABCD for zinc. Belongs to the ABC-3 integral membrane protein family.


ensembl_gene_id: UJ101_01737
symbol: APD07248.1
gene_biotype: protein_coding
description:
  RNA polymerase sigma-H factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor regulates genes such as algD, involved in alginate biosynthesis. Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: UJ101_01740
symbol: APD07251.1
gene_biotype: protein_coding
description:
  DNA helicase that may play a role in the repair of DNA that is damaged by ultraviolet light or other mutagens. Exhibits a magnesium-dependent ATP-dependent DNA-helicase activity that unwinds single- and double-stranded DNA in a 3'-5' direction; Belongs to the helicase family. RecQ subfamily; Contains 1 helicase ATP-binding domain; Contains 1 helicase C-terminal domain; KEGG: pae:PA3344 ATP-dependent DNA helicase RecQ.


ensembl_gene_id: UJ101_01745
symbol: APD07256.1
gene_biotype: protein_coding
description:
  Peptidyl-dipeptidase Dcp; Removes dipeptides from the C-termini of N-blocked tripeptides, tetrapeptides and larger peptides. Belongs to the peptidase M3 family; KEGG: rfr:Rfer_1048 peptidyl-dipeptidase Dcp.


ensembl_gene_id: UJ101_01748
symbol: APD07259.1
gene_biotype: protein_coding
description:
  Phytochrome-like protein cph1; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region. Has also a slight blue shift for the far-red maximum. Forms a two-component system with the rcp1 response regulator. In the N-terminal sectio; belongs to the phytochrome family; Contains 1 GAF domain; Contains 1 histidine kinase domain; Contains 1 PAS (PER-ARNT-SIM) domain; KEGG: ava:Ava_1559 UJ101; Phosphotransferases with a nitro [...]


ensembl_gene_id: UJ101_01749
symbol: tatD
gene_biotype: protein_coding
description:
  3'-5' exonuclease that prefers single-stranded DNA and RNA. May play a role in the H(2)O(2)-induced DNA damage repair; Belongs to the TatD-type hydrolase family. TatD subfamily; KEGG: emi:Emin_0103 TatD DNase family protein; Endodeoxyribonucleases producing 5'-phosphomonoesters.


ensembl_gene_id: UJ101_01757
symbol: kdsC
gene_biotype: protein_coding
description:
  3-deoxy-manno-octulosonate-8-phosphatase; Involved in the biosynthesis of lipopolysaccharides (LPSs), but is not essential. Catalyzes the hydrolysis of 3-deoxy- D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno- octulosonate (KDO) and inorganic phosphate; Belongs to the KdsC family; KEGG: rbi:RB2501_13764 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase).


ensembl_gene_id: UJ101_01758
symbol: APD07269.1
gene_biotype: protein_coding
description:
  Maf-like protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.


ensembl_gene_id: UJ101_01759
symbol: anmK
gene_biotype: protein_coding
description:
  anhydro-N-acetylmuramic acid kinase; Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the anhydro-N-acetylmuramic acid kinase family.


ensembl_gene_id: UJ101_01760
symbol: APD07271.1
gene_biotype: protein_coding
description:
  Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaB Na(+)/H(+) (TC 2.A.34) antiporter family.


ensembl_gene_id: UJ101_01761
symbol: APD07272.1
gene_biotype: protein_coding
description:
  Putative biopolymer transport protein ExbB-like; Involved in the TonB-dependent energy-dependent transport of various receptor-bound substrates. Protects ExbD from proteolytic degradation and functionally stabilizes TonB (By similarity); Belongs to the ExbB/TolQ family.


ensembl_gene_id: UJ101_01762
symbol: APD07273.1
gene_biotype: protein_coding
description:
  Biopolymer transport protein exbD2; Involved in the TonB-dependent energy-dependent transport of various receptor-bound substrates; Belongs to the ExbD/TolR family.


ensembl_gene_id: UJ101_01765
symbol: mtaB
gene_biotype: protein_coding
description:
  tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase; Catalyzes the methylthiolation of N6- threonylcarbamoyladenosine (t(6)A), leading to the formation of 2- methylthio-N6-threonylcarbamoyladenosine (ms(2)t(6)A) at position 37 in tRNAs that read codons beginning with adenine; Belongs to the methylthiotransferase family. MtaB subfamily; Contains 1 MTTase N-terminal domain; Contains 1 TRAM domain; KEGG: fpc:FPSM_02045 threonylcarbamoyladenosine tRNA methylthiotransferase MtaB.


ensembl_gene_id: UJ101_01766
symbol: APD07277.1
gene_biotype: protein_coding
description:
  Putative peptide-binding periplasmic protein; Probably part of an ABC transporter complex that could be involved in peptide import; Belongs to the bacterial solute-binding protein 5 family.


ensembl_gene_id: UJ101_01773
symbol: APD07284.1
gene_biotype: protein_coding
description:
  Putative transporter; Could be a drug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: UJ101_01779
symbol: folC
gene_biotype: protein_coding
description:
  Dihydrofolate synthase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan; Belongs to the MurCDEF family. MurE subfamily; KEGG: bfr:BF2974 dihydrofolate synthase / folylpolyglutamate synthase.


ensembl_gene_id: UJ101_01782
symbol: bdh
gene_biotype: protein_coding
description:
  Belongs to the short-chain dehydrogenases/reductases (SDR) family; KEGG: atu:Atu2308 3-hydroxybutyrate dehydrogenase.


ensembl_gene_id: UJ101_01783
symbol: APD07293.1
gene_biotype: protein_coding
description:
  Alkanal monooxygenase beta chain; Light-emitting reaction in luminous bacteria. The specific role of the beta subunit is unknown, but it is absolutely required for bioluminescence activity. Belongs to the bacterial luciferase oxidoreductase family; KEGG: rha:RHA1_ro11046 UJ101; Acting on paired donors, with incorporation or reduction of molecular oxygen. The oxygen incorporated need not be derived from O(2).


ensembl_gene_id: UJ101_01792
symbol: APD07302.1
gene_biotype: protein_coding
description:
  Perilipin-4; May play a role in triacylglycerol packaging into adipocytes. May function as a coat protein involved in the biogenesis of lipid droplets (By similarity); Belongs to the perilipin family.


ensembl_gene_id: UJ101_01793
symbol: APD07303.1
gene_biotype: protein_coding
description:
  Mechanosensitive channel that participates in the regulation of osmotic pressure changes within the cell. Forms an ion channel of 1.0 nanosiemens conductance with a slight preference for anions. The channel is sensitive to voltage (By similarity); Belongs to the MscS (TC 1.A.23) family.


ensembl_gene_id: UJ101_01798
symbol: APD07308.1
gene_biotype: protein_coding
description:
  Cystathionine beta-synthase; As it is highly similar to bacterial and plant cysteine synthases, it is possible that it catalyzes a related reaction. Belongs to the cysteine synthase/cystathionine beta- synthase family; KEGG: eca:ECA4113 cystathionine beta-synthase.


ensembl_gene_id: UJ101_01799
symbol: APD07309.1
gene_biotype: protein_coding
description:
  Catalyzes the acetylation of serine by acetyl-CoA to produce O-acetylserine (OAS); Belongs to the transferase hexapeptide repeat family; KEGG: dfe:Dfer_2038 serine O-acetyltransferase.


ensembl_gene_id: UJ101_01800
symbol: hisG
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Long subfamily.


ensembl_gene_id: UJ101_01801
symbol: hisD
gene_biotype: protein_coding
description:
  Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.


ensembl_gene_id: UJ101_01802
symbol: hisC
gene_biotype: protein_coding
description:
  Histidinol-phosphate transaminase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily; KEGG: fin:KQS_06980 histidinol-phosphate aminotransferase.


ensembl_gene_id: UJ101_01803
symbol: hisB
gene_biotype: protein_coding
description:
  Imidazoleglycerol-phosphate dehydratase; In the N-terminal sectio; belongs to the histidinol- phosphatase family; In the C-terminal sectio; belongs to the imidazoleglycerol-phosphate dehydratase family; KEGG: pbt:ING2E5B_0810 imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase.


ensembl_gene_id: UJ101_01804
symbol: hisH
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase subunit HisH; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.


ensembl_gene_id: UJ101_01805
symbol: hisA
gene_biotype: protein_coding
description:
  1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamideisomerase; Belongs to the HisA/HisF family; KEGG: eci:UTI89_C2297 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase.


ensembl_gene_id: UJ101_01806
symbol: hisF
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase subunit HisF; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.


ensembl_gene_id: UJ101_01807
symbol: hisI
gene_biotype: protein_coding
description:
  Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP; Belongs to the PRA-CH family; KEGG: smu:SMU_1263 phosphoribosyl-AMP cyclohydrolase.


ensembl_gene_id: UJ101_01809
symbol: tpiA
gene_biotype: protein_coding
description:
  Triose-phosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.


ensembl_gene_id: UJ101_01810
symbol: kdtA|waaA
gene_biotype: protein_coding
description:
  Lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family.


ensembl_gene_id: UJ101_01814
symbol: nadE
gene_biotype: protein_coding
description:
  NAD(+) synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source.


ensembl_gene_id: UJ101_01817
symbol: engB
gene_biotype: protein_coding
description:
  Putative GTP-binding protein EngB; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.


ensembl_gene_id: UJ101_01818
symbol: DLAT|aceF|pdhC
gene_biotype: protein_coding
description:
  Dihydrolipoyllysine-residue acetyltransferase; Catalyzes an unusual C-C bond hydrolysis of 2-hydroxy-6- oxo-6-phenylhexa-2,4-dienoic acid (HOPDA) to produce benzoic acid and 2-hydroxy-2,4-pentadienoic acid (HPD); Belongs to the AB hydrolase superfamily. BphD family; KEGG: rxy:Rxyl_2405 pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase).


ensembl_gene_id: UJ101_01820
symbol: mraW|rsmH
gene_biotype: protein_coding
description:
  16S rRNA (cytosine(1402)-N(4))-methyltransferase; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.


ensembl_gene_id: UJ101_01822
symbol: APD07332.1
gene_biotype: protein_coding
description:
  Penicillin-binding protein; Synthesis of cross-linked peptidoglycan from the lipid intermediates. Belongs to the transpeptidase family.


ensembl_gene_id: UJ101_01823
symbol: murE
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily.


ensembl_gene_id: UJ101_01824
symbol: mraY
gene_biotype: protein_coding
description:
  phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.


ensembl_gene_id: UJ101_01825
symbol: murD
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.


ensembl_gene_id: UJ101_01827
symbol: murG
gene_biotype: protein_coding
description:
  Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.


ensembl_gene_id: UJ101_01830
symbol: ftsA
gene_biotype: protein_coding
description:
  Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.


ensembl_gene_id: UJ101_01831
symbol: ftsZ
gene_biotype: protein_coding
description:
  Cell division protein FtsZ like protein 1, chloroplastic; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.


ensembl_gene_id: UJ101_01840
symbol: APD07347.1
gene_biotype: protein_coding
description:
  Thiol-disulfide oxidoreductase with a reductive function, involved in spore cortex synthesis. It could be involved either in breaking disulfide bonds in cortex components or in proteins that are important for cortex synthesis, or in thiol/disulfide bond interchange; Belongs to the thioredoxin family; Contains 1 thioredoxin domain.


ensembl_gene_id: UJ101_01845
symbol: prmA
gene_biotype: protein_coding
description:
  Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family; KEGG: cao:Celal_0478 ribosomal protein L11 methyltransferase; Methyltransferases.


ensembl_gene_id: UJ101_01846
symbol: bioA
gene_biotype: protein_coding
description:
  Adenosylmethionine--8-amino-7-oxononanoate transaminase; Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. BioA subfamily; KEGG: orh:Ornrh_1600 adenosylmethionine---8-amino-7-oxononanoate aminotransferase.


ensembl_gene_id: UJ101_01848
symbol: IARS|ileS
gene_biotype: protein_coding
description:
  isoleucine--tRNA ligase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 2 subfamily.


ensembl_gene_id: UJ101_01850
symbol: lspA
gene_biotype: protein_coding
description:
  Signal peptidase II; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.


ensembl_gene_id: UJ101_01854
symbol: ubiE
gene_biotype: protein_coding
description:
  Demethylmenaquinone methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2).


ensembl_gene_id: UJ101_01864
symbol: APD07371.1
gene_biotype: protein_coding
description:
  Belongs to the ACC deaminase/D-cysteine desulfhydrase family; KEGG: ppt:PPS_1596 1-aminocyclopropane-1-carboxylate deaminase.


ensembl_gene_id: UJ101_01866
symbol: hemL
gene_biotype: protein_coding
description:
  Glutamate-1-semialdehyde 2,1-aminomutase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. HemL subfamily; KEGG: fbr:FBFL15_2369 glutamate-1-semialdehyde 2,1-aminomutase.


ensembl_gene_id: UJ101_01869
symbol: APD07376.1
gene_biotype: protein_coding
description:
  Dihydrolipoyllysine-residue succinyltransferase; Belongs to the 2-oxoacid dehydrogenase family; Contains 1 lipoyl-binding domain; KEGG: psn:Pedsa_1417 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase).


ensembl_gene_id: UJ101_01870
symbol: lnt
gene_biotype: protein_coding
description:
  Apolipoprotein N-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily.


ensembl_gene_id: UJ101_01875
symbol: menB-2
gene_biotype: protein_coding
description:
  1,4-dihydroxy-2-naphthoyl-CoA synthase; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA); Belongs to the enoyl-CoA hydratase/isomerase family. MenB subfamily.


ensembl_gene_id: UJ101_01877
symbol: APD07384.1
gene_biotype: protein_coding
description:
  Protein NrfI; May play a role in cytochrome c biogenesis and may be required for maturation of the NrfA protein. In the C-terminal sectio; belongs to the CcmF/CycK/Ccl1/NrfE/CcsA family.


ensembl_gene_id: UJ101_01882
symbol: ldcA
gene_biotype: protein_coding
description:
  Muramoyltetrapeptide carboxypeptidase; May be involved in the degradation of peptidoglycan by catalyzing the cleavage of the terminal D-alanine residue from cytoplasmic murein peptides; Belongs to the peptidase S66 family; KEGG: llo:LLO_0747 muramoyltetrapeptide carboxypeptidase.


ensembl_gene_id: UJ101_01883
symbol: APD07390.1
gene_biotype: protein_coding
description:
  Histidine kinase; Member of the two-component regulatory system LytR/LytS that probably regulates genes involved in cell wall metabolism; Contains 1 histidine kinase domain; KEGG: pod:PODO_22115 two-component system, sensor histidine kinase YesM.


ensembl_gene_id: UJ101_01885
symbol: ffh
gene_biotype: protein_coding
description:
  Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily.


ensembl_gene_id: UJ101_01891
symbol: APD07398.1
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.


ensembl_gene_id: UJ101_01897
symbol: DPO3G|dnaX
gene_biotype: protein_coding
description:
  DNA-directed DNA polymerase; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: UJ101_01918
symbol: UNG|UDG
gene_biotype: protein_coding
description:
  uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.


ensembl_gene_id: UJ101_01919
symbol: RARS|argS
gene_biotype: protein_coding
description:
  arginine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family; KEGG: fco:FCOL_05615 arginyl-tRNA synthetase.


ensembl_gene_id: UJ101_01921
symbol: APD07428.1
gene_biotype: protein_coding
description:
  Lactocepin; Protease which breaks down milk proteins during the growth of the bacteria on milk. Belongs to the peptidase S8 family; Contains 2 FIVAR domains; Contains 1 peptidase S8 domain; KEGG: llc:LACR_C42 lactocepin.


ensembl_gene_id: UJ101_01922
symbol: pncC
gene_biotype: protein_coding
description:
  Nicotinamide-nucleotide amidase; Belongs to the CinA family; KEGG: sht:KO02_04415 nicotinamide-nucleotide amidase.


ensembl_gene_id: UJ101_01923
symbol: APD07430.1
gene_biotype: protein_coding
description:
  C4-dicarboxylic acid transporter DauA; Responsible for the aerobic transport of succinate from the periplasm to the cytoplasm at acidic pH; Belongs to the SLC26A/SulP transporter (TC 2.A.53) family; Contains 1 STAS domain.


ensembl_gene_id: UJ101_01924
symbol: lon
gene_biotype: protein_coding
description:
  Endopeptidase La; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.


ensembl_gene_id: UJ101_01925
symbol: APD07432.1
gene_biotype: protein_coding
description:
  Phytochrome-like protein cph1; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region. Has also a slight blue shift for the far-red maximum. Forms a two-component system with the rcp1 response regulator. In the N-terminal sectio; belongs to the phytochrome family; Contains 1 GAF domain; Contains 1 histidine kinase domain; Contains 1 PAS (PER-ARNT-SIM) domain; KEGG: rba:RB2549 UJ101; Phosphotransferases with a nitroge [...]


ensembl_gene_id: UJ101_01926
symbol: purA|ADSS
gene_biotype: protein_coding
description:
  Adenylosuccinate synthase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.


ensembl_gene_id: UJ101_01931
symbol: APD07438.1
gene_biotype: protein_coding
description:
  Multidrug resistance protein MdtE; Part of the tripartite efflux system MdtEF-TolC, which confers resistance to various compounds; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: UJ101_01932
symbol: APD07439.1
gene_biotype: protein_coding
description:
  Macrolide export ATP-binding/permease protein MacB; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides; Belongs to the ABC transporter superfamily. Macrolide exporter (TC 3.A.1.122) family; Contains 1 ABC transporter domain.


ensembl_gene_id: UJ101_01934
symbol: APD07441.1
gene_biotype: protein_coding
description:
  Lipoprotein-releasing system ATP-binding protein LolD; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner; Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family; Contains 1 ABC transporter domain.


ensembl_gene_id: UJ101_01935
symbol: APD07442.1
gene_biotype: protein_coding
description:
  Ribosomal-protein-alanine N-acetyltransferase; Catalyzes the transfer of an acetyl group from acetyl coenzyme A (AcCoA) to an acceptor substrate and releases both CoA and the acetylated product. It prefers the peptide Asp-Phe methyl ester (or aspartame) and the peptide antibiotics polymyxin B and colistin. Other substrates like dopamine, serotonin, puromycin, chloramphenicol, D-glucosamine, glycine and N-alpha-acetyl-L- glutamine are used and displayed lower activity; Contains 1 N-acetyltransferase domain; KEGG: pat:Patl_0113 ribosomal-protein-alanine N-acetyltransferase.


ensembl_gene_id: UJ101_01937
symbol: aroA-2
gene_biotype: protein_coding
description:
  3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.


ensembl_gene_id: UJ101_01939
symbol: APD07446.1
gene_biotype: protein_coding
description:
  Endonuclease MutS2; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity. Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.


ensembl_gene_id: UJ101_01943
symbol: uvrD|pcrA
gene_biotype: protein_coding
description:
  DNA helicase; Has both ATPase and helicase activities. Unwinds DNA duplexes with 3' to 5' polarity with respect to the bound strand and initiates unwinding most effectively when a single-stranded region is present. Involved in the post-incision events of nucleotide excision repair and methyl-directed mismatch repair. Belongs to the helicase family. UvrD subfamily; Contains 1 uvrD-like helicase ATP-binding domain; Contains 1 uvrD-like helicase C-terminal domain; KEGG: hmo:HM1_3029 DNA helicase II / ATP-dependent DNA helicase PcrA.


ensembl_gene_id: UJ101_01946
symbol: murA
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.


ensembl_gene_id: UJ101_01948
symbol: APD07455.1
gene_biotype: protein_coding
description:
  Iron-chelate-transporting ATPase; Part of the ABC transporter complex RbsABCD involved in ribose import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family; Contains 2 ABC transporter domains; KEGG: yal:AT01_3856 iron complex transport system ATP-binding protein.


ensembl_gene_id: UJ101_01950
symbol: APD07457.1
gene_biotype: protein_coding
description:
  Histidine kinase; KEGG: sds:SDEG_0590 two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR.


ensembl_gene_id: UJ101_01953
symbol: lipB
gene_biotype: protein_coding
description:
  Lipoyl(octanoyl) transferase; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate.


ensembl_gene_id: UJ101_01957
symbol: birA
gene_biotype: protein_coding
description:
  biotin--[acetyl-CoA-carboxylase] ligase; KEGG: bbl:BLBBGE_221 BirA family transcriptional regulator, biotin operon repressor / biotin-(acetyl-CoA-carboxylase) ligase.


ensembl_gene_id: UJ101_01958
symbol: rsfS
gene_biotype: protein_coding
description:
  Ribosomal silencing factor RsfS; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.


ensembl_gene_id: UJ101_01959
symbol: ftsH|hflB
gene_biotype: protein_coding
description:
  Mitochondrial respiratory chain complexes assembly protein AFG3; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family.  In the central section; belongs to the AAA ATPase family.


ensembl_gene_id: UJ101_01962
symbol: psd
gene_biotype: protein_coding
description:
  Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).


ensembl_gene_id: UJ101_01966
symbol: sdhA|frdA
gene_biotype: protein_coding
description:
  Succinate dehydrogenase (quinone); Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily; KEGG: cei:CEPID_11225 succinate dehydrogenase / fumarate reductase, flavoprotein subunit.


ensembl_gene_id: UJ101_01968
symbol: fixL
gene_biotype: protein_coding
description:
  Histidine kinase; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region. Has also a slight blue shift for the far-red maximum. Forms a two-component system with the rcp1 response regulator. In the N-terminal sectio; belongs to the phytochrome family; Contains 1 GAF domain; Contains 1 histidine kinase domain; Contains 1 PAS (PER-ARNT-SIM) domain; KEGG: gps:C427_2242 two-component system, LuxR family, sensor kinase FixL.


ensembl_gene_id: UJ101_01972
symbol: APD07479.1
gene_biotype: protein_coding
description:
  Dipeptidyl-peptidase IV; Cell surface glycoprotein receptor involved in the costimulatory signal essential for T-cell receptor (TCR)-mediated T-cell activation. Acts as a positive regulator of T-cell coactivation, by binding at least ADA, CAV1, IGF2R, and PTPRC. Its binding to CAV1 and CARD11 induces T-cell proliferation and NF- kappa-B activation in a T-cell receptor/CD3-dependent manner. Its interaction with ADA also regulates lymphocyte-epithelial cell adhesion. In association with FAP is involved in the pericellular proteolysis of the extracellular matrix (ECM), the migration and i [...]


ensembl_gene_id: UJ101_01977
symbol: APD07484.1
gene_biotype: protein_coding
description:
  The comE operon is required for the binding and uptake of transforming DNA. ComEC is required for internalization but is dispensable for DNA binding. To H.influenzae REC2, N.gonorrhoeae ComA and E.coli YcaI.


ensembl_gene_id: UJ101_01982
symbol: GARS|glyS1
gene_biotype: protein_coding
description:
  glycine--tRNA ligase; Catalyzes the attachment of glycine to tRNA(Gly). Belongs to the class-II aminoacyl-tRNA synthetase family.


ensembl_gene_id: UJ101_01983
symbol: APD07490.1
gene_biotype: protein_coding
description:
  Part of the binding-protein-dependent transport system for dipeptide; probably responsible for the translocation of the substrate across the membrane. Belongs to the binding-protein-dependent transport system permease family. OppBC subfamily; Contains 1 ABC transmembrane type-1 domain.


ensembl_gene_id: UJ101_01984
symbol: APD07491.1
gene_biotype: protein_coding
description:
  C-terminal processing peptidase; Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3 (PBP3). May be involved in protection of the bacterium from thermal and osmotic stresses (By similarity); Belongs to the peptidase S41A family; Contains 1 PDZ (DHR) domain; KEGG: ptq:P700755_001285 carboxyl-terminal processing protease.


ensembl_gene_id: UJ101_01986
symbol: surE
gene_biotype: protein_coding
description:
  5'-nucleotidase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.


ensembl_gene_id: UJ101_01988
symbol: hemB|ALAD
gene_biotype: protein_coding
description:
  Porphobilinogen synthase; Catalyzes an early step in the biosynthesis of tetrapyrroles. Binds two molecules of 5-aminolevulinate per subunit, each at a distinct site, and catalyzes their condensation to form porphobilinogen (By similarity); Belongs to the ALAD family; KEGG: rbi:RB2501_05990 porphobilinogen synthase.


ensembl_gene_id: UJ101_01991
symbol: KARS|lysS
gene_biotype: protein_coding
description:
  lysine--tRNA ligase; Belongs to the class-II aminoacyl-tRNA synthetase family; KEGG: bth:BT_2122 lysyl-tRNA synthetase, class II.


ensembl_gene_id: UJ101_01992
symbol: APD07499.1
gene_biotype: protein_coding
description:
  Catalyzes the oxidation of alkyl nitronates to produce the corresponding carbonyl compounds and nitrites; Belongs to the nitronate monooxygenase family; KEGG: pdr:H681_12355 nitronate monooxygenase.


ensembl_gene_id: UJ101_01994
symbol: APD07501.1
gene_biotype: protein_coding
description:
  Putative N-acetyltransferase. May act on ribosomal proteins (Potential); Belongs to the acetyltransferase family; Contains 1 N-acetyltransferase domain; KEGG: siv:SSIL_0315 ribosomal-protein-alanine N-acetyltransferase.


ensembl_gene_id: UJ101_02004
symbol: fabI
gene_biotype: protein_coding
description:
  Enoyl-[acyl-carrier-protein] reductase (NADH); KEGG: lby:Lbys_2165 enoyl-(acyl-carrier protein) reductase I.


ensembl_gene_id: UJ101_02007
symbol: sixA
gene_biotype: protein_coding
description:
  Phosphohistidine phosphatase, SixA; KEGG: sno:Snov_2256 phosphohistidine phosphatase; Phosphoric monoester hydrolases.


ensembl_gene_id: UJ101_02009
symbol: APD07513.1
gene_biotype: protein_coding
description:
  This protein reduces chromate accumulation and is essential for chromate resistance. Belongs to the chromate ion transporter (CHR) (TC 2.A.51) family.


ensembl_gene_id: UJ101_02010
symbol: APD07514.1
gene_biotype: protein_coding
description:
  DNA base-flipping protein; Involved in DNA damage recognition. Binds DNA containing O(6)-methylguanine. Binds to the damaged base and flips the base out of the DNA duplex into an extrahelical conformation, which allows processing by repair proteins (By similarity); Belongs to the MGMT family. ATL subfamily.


ensembl_gene_id: UJ101_02011
symbol: trmB|METTL1
gene_biotype: protein_coding
description:
  tRNA (guanine(46)-N(7))-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.


ensembl_gene_id: UJ101_02012
symbol: APD07516.1
gene_biotype: protein_coding
description:
  Histidine kinase; Member of the two-component regulatory system PhoP/PhoR involved in the alkaline phosphatase genes regulation. PhoR may function as a membrane-associated protein kinase that phosphorylates PhoP in response to environmental signals. Contains 1 histidine kinase domain; Contains 1 PAS (PER-ARNT-SIM) domain; KEGG: cpi:Cpin_1223 two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR.


ensembl_gene_id: UJ101_02013
symbol: APD07517.1
gene_biotype: protein_coding
description:
  Member of the two-component regulatory system MtrA/MtrB; Contains 1 OmpR/PhoB-type DNA-binding domain; Contains 1 response regulatory domain.


ensembl_gene_id: UJ101_02017
symbol: msrAB
gene_biotype: protein_coding
description:
  Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.


ensembl_gene_id: UJ101_02020
symbol: APD07524.1
gene_biotype: protein_coding
description:
  Belongs to the 3-hydroxyacyl-CoA dehydrogenase family; KEGG: ecc:c2467 3-hydroxybutyryl-CoA dehydrogenase.


ensembl_gene_id: UJ101_02022
symbol: arnT|pmrK
gene_biotype: protein_coding
description:
  Lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase; KEGG: amo:Anamo_1886 4-amino-4-deoxy-L-arabinose transferase.


ensembl_gene_id: UJ101_02037
symbol: rep
gene_biotype: protein_coding
description:
  DNA helicase; ATP-dependent 3'- to 5'-DNA helicase that could disrupt recombinogenic DNA intermediates and facilitate single strand annealing. Unwinds nicked and partial Holliday junctions in vitro. Anneals two single strands into a dsDNA molecule in vitro; Belongs to the helicase family. UvrD subfamily; Contains 1 uvrD-like helicase ATP-binding domain; Contains 1 uvrD-like helicase C-terminal domain; KEGG: mmt:Metme_0134 ATP-dependent DNA helicase Rep.


ensembl_gene_id: UJ101_02038
symbol: APD07542.1
gene_biotype: protein_coding
description:
  Site-specific DNA-methyltransferase (adenine-specific); Binds the system-specific DNA recognition site 5'-CAGAG- 3'. Necessary for restriction and for methylation of A-4. Belongs to the N(4)/N(6)-methyltransferase family; KEGG: afl:Aflv_1174 site-specific DNA-methyltransferase (adenine-specific).


ensembl_gene_id: UJ101_02050
symbol: era
gene_biotype: protein_coding
description:
  GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.


ensembl_gene_id: UJ101_02052
symbol: msrB
gene_biotype: protein_coding
description:
  Peptide-methionine (R)-S-oxide reductase; Belongs to the MsrB Met sulfoxide reductase family; KEGG: vfu:vfu_A01949 peptide-methionine (R)-S-oxide reductase.


ensembl_gene_id: UJ101_02056
symbol: APD07559.1
gene_biotype: protein_coding
description:
  Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine; Belongs to the MsrA Met sulfoxide reductase family; KEGG: dfe:Dfer_0925 peptide-methionine (S)-S-oxide reductase.


ensembl_gene_id: UJ101_02059
symbol: topB
gene_biotype: protein_coding
description:
  DNA topoisomerase; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA superco [...]


ensembl_gene_id: UJ101_02063
symbol: GMPP
gene_biotype: protein_coding
description:
  Mannose-1-phosphate guanylyltransferase; Involved in the assembly of a N-linked pentasaccharide that decorates the S-layer glycoprotein and flagellins. Involved in the biosynthesis of the hexuronic acid found at position 3 of the pentasaccharide; Belongs to the UDPGP type 2 family; KEGG: ade:Adeh_3692 mannose-1-phosphate guanylyltransferase.


ensembl_gene_id: UJ101_02067
symbol: hemK|prmC|HEMK
gene_biotype: protein_coding
description:
  Peptide chain release factor N(5)-glutamine methyltransferase; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily; KEGG: gpi:GPICK_02200 release factor glutamine methyltransferase.


ensembl_gene_id: UJ101_02071
symbol: rhlE
gene_biotype: protein_coding
description:
  ATP-binding RNA helicase involved in 40S ribosomal subunit biogenesis and is required for the normal formation of 18S rRNAs through pre-rRNA processing at A0, A1 and A2 sites. Required for vegetative growth (By similarity); Belongs to the DEAD box helicase family. DDX49/DBP8 subfamily; Contains 1 helicase ATP-binding domain; Contains 1 helicase C-terminal domain; KEGG: eco:b0797 ATP-dependent RNA helicase RhlE.


ensembl_gene_id: UJ101_02072
symbol: bioB
gene_biotype: protein_coding
description:
  Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.


ensembl_gene_id: UJ101_02074
symbol: rlpA
gene_biotype: protein_coding
description:
  rlpA-like lipoprotein; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.


ensembl_gene_id: UJ101_02077
symbol: APD07580.1
gene_biotype: protein_coding
description:
  Beta-barrel assembly-enhancing protease; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state; Belongs to the peptidase M48 family. BepA subfamily; Contains 4 TPR repeats.


ensembl_gene_id: UJ101_02084
symbol: ackA
gene_biotype: protein_coding
description:
  Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.


ensembl_gene_id: UJ101_02085
symbol: APD07588.1
gene_biotype: protein_coding
description:
  Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.


ensembl_gene_id: UJ101_02087
symbol: APD07590.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: UJ101_02088
symbol: ggt
gene_biotype: protein_coding
description:
  Belongs to the gamma-glutamyltransferase family; KEGG: hna:Hneap_0026 gamma-glutamyltranspeptidase / glutathione hydrolase.


ensembl_gene_id: UJ101_02089
symbol: APD07592.1
gene_biotype: protein_coding
description:
  Sulfoacetaldehyde reductase; Catalyzes the formation of isethionate from 2- sulfoacetaldehyde in the deaminative pathway of taurine. Constitutively expressed enzyme that only mediates a small part of the activity observed in taurine-grown cells; Belongs to the short-chain dehydrogenases/reductases (SDR) family; KEGG: wsu:WS2125 UJ101; Oxidoreductases.


ensembl_gene_id: UJ101_02090
symbol: trmD
gene_biotype: protein_coding
description:
  tRNA (guanine(37)-N(1))-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.


ensembl_gene_id: UJ101_02093
symbol: kbl
gene_biotype: protein_coding
description:
  Glycine C-acetyltransferase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA.


ensembl_gene_id: UJ101_02096
symbol: APD07599.1
gene_biotype: protein_coding
description:
  Aquaporin Z; Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity; Belongs to the MIP/aquaporin (TC 1.A.8) family.


ensembl_gene_id: UJ101_02098
symbol: trpA
gene_biotype: protein_coding
description:
  Tryptophan synthase; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.


ensembl_gene_id: UJ101_02099
symbol: trpB
gene_biotype: protein_coding
description:
  Tryptophan synthase; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.


ensembl_gene_id: UJ101_02101
symbol: APD07604.1
gene_biotype: protein_coding
description:
  Histidine kinase; Member of the two-component regulatory system GtcS/GtcR which may act in the control of the transcription of the grs operon which encodes the multienzymes involved in the biosynthesis of the peptide antibiotic gramicidin S. Probably activates GtcR by phosphorylation. Contains 1 HAMP domain; Contains 1 histidine kinase domain; KEGG: ban:BA_4921 histidine kinase.


ensembl_gene_id: UJ101_02102
symbol: APD07605.1
gene_biotype: protein_coding
description:
  Response regulator ArlR; Member of the two-component regulatory system ArlS/ArlR; Contains 1 OmpR/PhoB-type DNA-binding domain; Contains 1 response regulatory domain.


ensembl_gene_id: UJ101_02106
symbol: APD07609.1
gene_biotype: protein_coding
description:
  KEGG: synp:Syn7502_03240 3-oxoacyl-(acyl-carrier-protein) synthase II; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.


ensembl_gene_id: UJ101_02107
symbol: APD07610.1
gene_biotype: protein_coding
description:
  Low/medium affinity, Na(+)-dependent bicarbonate transporter; Belongs to the SLC26A/SulP transporter (TC 2.A.53) family; Contains 1 STAS domain.


ensembl_gene_id: UJ101_02109
symbol: APD07612.1
gene_biotype: protein_coding
description:
  lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: UJ101_02113
symbol: APD07616.1
gene_biotype: protein_coding
description:
  Maltoporin; Involved in the transport of maltose and maltodextrins; Belongs to the porin LamB (TC 1.B.3) family.


ensembl_gene_id: UJ101_02114
symbol: aat
gene_biotype: protein_coding
description:
  Leucyltransferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine.


ensembl_gene_id: UJ101_02117
symbol: APD07620.1
gene_biotype: protein_coding
description:
  Coproporphyrinogen dehydrogenase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: UJ101_02118
symbol: comEB
gene_biotype: protein_coding
description:
  DCMP deaminase; Supplies the nucleotide substrate for thymidylate synthetase. Belongs to the cytidine and deoxycytidylate deaminase family; Contains 1 CMP/dCMP-type deaminase domain; KEGG: fin:KQS_12125 dCMP deaminase.


ensembl_gene_id: UJ101_02119
symbol: APD07622.1
gene_biotype: protein_coding
description:
  C-terminal processing peptidase; Belongs to the peptidase S41A family; Contains 1 PDZ (DHR) domain; KEGG: afd:Alfi_3150 carboxyl-terminal processing protease.


ensembl_gene_id: UJ101_02122
symbol: udp|UPP
gene_biotype: protein_coding
description:
  Uridine phosphorylase; Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1- phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis (By similarity); Belongs to the PNP/UDP phosphorylase family; KEGG: ccm:Ccan_19670 uridine phosphorylase.


ensembl_gene_id: UJ101_02124
symbol: APD07627.1
gene_biotype: protein_coding
description:
  Acylaminoacyl-peptidase; Extracellular dipeptidyl-peptidase which removes N- terminal dipeptides sequentially from polypeptides having unsubstituted N-termini; Belongs to the peptidase S9B family; KEGG: ccs:CCNA_02065 acylaminoacyl-peptidase.


ensembl_gene_id: UJ101_02126
symbol: APD07629.1
gene_biotype: protein_coding
description:
  Nod factor export ATP-binding protein; Part of the ABC transporter complex NodIJ involved in the export of the nodulation factors (Nod factors), the bacterial signal molecules that induce symbiosis and subsequent nodulation induction. Nod factors are LCO (lipo-chitin oligosaccharide), a modified beta-1,4-linked N-acetylglucosamine oligosaccharide. This subunit is responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Lipooligosaccharide exporter (TC 3.A.1.102) family; Contains 1 ABC transporter domain.


ensembl_gene_id: UJ101_02127
symbol: lepA
gene_biotype: protein_coding
description:
  Translation factor GUF1 like protein, chloroplastic; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.


ensembl_gene_id: UJ101_02129
symbol: APD07632.1
gene_biotype: protein_coding
description:
  Nitric-oxide reductase (cytochrome c); Component of the anaerobic respiratory chain that transforms nitrate to dinitrogen (denitrification). NorB is the catalytic subunit of the enzyme complex. Shows proton pump activity across the membrane in denitrifying bacterial cells. The mononitrogen reduction is probably coupled to electron transport phosphorylation (By similarity); Belongs to the heme-copper respiratory oxidase family; KEGG: mtt:Ftrac_2744 nitric oxide reductase subunit B.


ensembl_gene_id: UJ101_02130
symbol: nirK
gene_biotype: protein_coding
description:
  Nitrite reductase (NO-forming); Belongs to the multicopper oxidase family; Contains 2 plastocyanin-like domains; KEGG: fco:FCOL_01550 nitrite reductase (NO-forming).


ensembl_gene_id: UJ101_02132
symbol: APD07635.1
gene_biotype: protein_coding
description:
  Denitrification regulatory protein NirQ; Activator of nitrite and nitric oxide reductases. Belongs to the CbbQ/NirQ/NorQ/GpvN family.


ensembl_gene_id: UJ101_02133
symbol: APD07636.1
gene_biotype: protein_coding
description:
  Protein NorD; Part of the operon norEFCBQD encoding nitric oxide reductase. Essential virulence factor, probably involved in the detoxification of nitric oxide (NO) produced in the macrophages during the innate response against infection (By similarity); Contains 1 VWFA domain.


ensembl_gene_id: UJ101_02134
symbol: APD07637.1
gene_biotype: protein_coding
description:
  Cytochrome bo(3) ubiquinol terminal oxidase is the component of the aerobic respiratory chain of E.coli that predominates when cells are grown at high aeration. Has proton pump activity across the membrane in addition to electron transfer, pumping 2 protons/electron (By similarity); Belongs to the cytochrome c oxidase subunit 3 family.


ensembl_gene_id: UJ101_02136
symbol: DCAA
gene_biotype: protein_coding
description:
  isovaleryl-CoA dehydrogenase, mitochondrial; Belongs to the acyl-CoA dehydrogenase family; KEGG: ppul:RO07_02285 acyl-CoA dehydrogenase; With other acceptors.


ensembl_gene_id: UJ101_02139
symbol: lipA
gene_biotype: protein_coding
description:
  Lipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.


ensembl_gene_id: UJ101_02142
symbol: acpH
gene_biotype: protein_coding
description:
  [Acyl-carrier-protein] phosphodiesterase; Converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine prosthetic group from ACP; Belongs to the AcpH family; KEGG: pge:LG71_23310 acyl carrier protein phosphodiesterase.


ensembl_gene_id: UJ101_02147
symbol: thyA|TYMS
gene_biotype: protein_coding
description:
  Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis.


ensembl_gene_id: UJ101_02151
symbol: APD07652.1
gene_biotype: protein_coding
description:
  Inositol 2-dehydrogenase; Belongs to the Gfo/Idh/MocA family; KEGG: sxo:SXYL_00038 myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase.


ensembl_gene_id: UJ101_02153
symbol: crtI
gene_biotype: protein_coding
description:
  All-trans-zeta-carotene desaturase; Catalyzes three successive dehydrogenation reactions that lead to the introduction of three double bonds into dehydrosqualene (4,4'-diapophytoene), with 4,4'-diapophytofluene and 4,4'-diapo-zeta-carotene as intermediates, and 4,4'- diaponeurosporene (the major deep-yellow pigment in staphylococci strains) as the end product. Those are initial steps in the biosynthesis of staphyloxanthin, an orange carotenoid present in most staphylococci strains (By similarity); Belongs to the carotenoid/retinoid oxidoreductase family. CrtN subfamily; KEGG: msa:Mycsm [...]


ensembl_gene_id: UJ101_02156
symbol: crtZ
gene_biotype: protein_coding
description:
  Beta-carotene 3-hydroxylase; Catalyzes the hydroxylation reaction from beta-carotene to zeaxanthin. Belongs to the sterol desaturase family; KEGG: ppw:PputW619_2665 beta-carotene 3-hydroxylase.


ensembl_gene_id: UJ101_02158
symbol: APD07659.1
gene_biotype: protein_coding
description:
  Putative L-lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.


ensembl_gene_id: UJ101_02159
symbol: ldhA
gene_biotype: protein_coding
description:
  D-lactate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family; KEGG: psa:PST_0207 D-lactate dehydrogenase.


ensembl_gene_id: UJ101_02161
symbol: APD07662.1
gene_biotype: protein_coding
description:
  HTH-type transcriptional regulator YodB; Negatively regulates yodC and azoR1 which may contribute to the degradation of aromatic compounds. Probably positively regulates the catechol-specific transcription of mhqNOP, mhqED, and mhqA; Contains 1 HTH hxlR-type DNA-binding domain.


ensembl_gene_id: UJ101_02164
symbol: APD07665.1
gene_biotype: protein_coding
description:
  K(+)/H(+) antiporter that extrudes potassium in exchange for external protons and maintains the internal concentration of potassium under toxic levels; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family. NhaP2 subfamily; Contains 1 RCK C-terminal domain.


ensembl_gene_id: UJ101_02166
symbol: mnmE|trmE|MSS1
gene_biotype: protein_coding
description:
  tRNA modification GTPase MnmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.


ensembl_gene_id: UJ101_02169
symbol: APD07670.1
gene_biotype: protein_coding
description:
  Dihydrolipoyllysine-residue acetyltransferase; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).


ensembl_gene_id: UJ101_02170
symbol: PDHA|pdhA
gene_biotype: protein_coding
description:
  Pyruvate dehydrogenase (acetyl-transferring); The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).


ensembl_gene_id: UJ101_02171
symbol: cdd|CDA
gene_biotype: protein_coding
description:
  Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: UJ101_02174
symbol: murF
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.


ensembl_gene_id: UJ101_02175
symbol: idi|IDI
gene_biotype: protein_coding
description:
  Isopentenyl-diphosphate Delta-isomerase; Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP); Belongs to the IPP isomerase type 1 family; Contains 1 nudix hydrolase domain; KEGG: synp:Syn7502_02525 isopentenyl-diphosphate delta-isomerase.


ensembl_gene_id: UJ101_02176
symbol: queG
gene_biotype: protein_coding
description:
  Epoxyqueuosine reductase; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr); Belongs to the QueG family.


ensembl_gene_id: UJ101_02181
symbol: speG
gene_biotype: protein_coding
description:
  Diamine N-acetyltransferase; Enzyme which catalyzes the acetylation of polyamines. Substrate specificity: norspermidine = spermidine >> spermine > N(1)-acetylspermine > putrescine. This highly regulated enzyme allows a fine attenuation of the intracellular concentration of polyamines. Also involved in the regulation of polyamine transport out of cells. Acts on 1,3-diaminopropane, 1,5-diaminopentane, putrescine, spermidine (forming N(1)- and N(8)-acetylspermidine), spermine, N(1)-acetylspermidine and N(8)-acetylspermidine (By similarity); Belongs to the acetyltransferase family; Contain [...]


ensembl_gene_id: UJ101_02184
symbol: APD07685.1
gene_biotype: protein_coding
description:
  Putative quorum-quenching lactonase YtnP; Probable hydrolase that is able to inhibit the signaling pathway required for the streptomycin production and development of aerial mycelium in S.griseus. Thus, serves as a defensive strategy against competing bacteria. The putative target for YtnP may be a gamma-butyrolactone termed A factor, which is the quorum- sensing signaling molecule that positively regulates streptomycin production and development of aerial hyphae in S.griseus; Belongs to the metallo-beta-lactamase superfamily.


ensembl_gene_id: UJ101_02185
symbol: ppa
gene_biotype: protein_coding
description:
  Inorganic diphosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.


ensembl_gene_id: UJ101_02186
symbol: valS
gene_biotype: protein_coding
description:
  valine--tRNA ligase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.


ensembl_gene_id: UJ101_02192
symbol: APD07693.1
gene_biotype: protein_coding
description:
  Aspartate transaminase; Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family; KEGG: bth:BT_1476 aspartate aminotransferase.


ensembl_gene_id: UJ101_02195
symbol: APD07696.1
gene_biotype: protein_coding
description:
  RNA polymerase sigma factor SigY; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. Positively regulates the expression of the sigY- yxlCDEFG operon upon nitrogen starvation. Also positively regulates ybgB; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: UJ101_02196
symbol: APD07697.1
gene_biotype: protein_coding
description:
  Hypothetical protein; KEGG: chu:CHU_3540 UJ101; Phosphotransferases with a nitrogenous group as acceptor.


ensembl_gene_id: UJ101_02197
symbol: cheB
gene_biotype: protein_coding
description:
  Protein-glutamate methylesterase; Acts as a receptor histidine kinase for a signal transduction pathway. This protein undergoes an ATP-dependent autophosphorylation at a conserved histidine residue in the kinase core, and a phosphoryl group is then transferred to a conserved aspartate residue in the receiver domain (By similarity); Belongs to the protein kinase superfamily. Ser/Thr protein kinase family; Contains 1 GAF domain; Contains 1 histidine kinase domain; Contains 1 protein kinase domain; Contains 1 response regulatory domain; Contains 1 TPR repeat; KEGG: cst:CLOST_1715 two-comp [...]


ensembl_gene_id: UJ101_02198
symbol: APD07699.1
gene_biotype: protein_coding
description:
  Chaperone protein htpG; Molecular chaperone. Has ATPase activity; Belongs to the heat shock protein 90 family.


ensembl_gene_id: UJ101_02199
symbol: maa
gene_biotype: protein_coding
description:
  Maltose O-acetyltransferase; Belongs to the transferase hexapeptide repeat family; KEGG: gan:UMN179_01515 maltose O-acetyltransferase.


ensembl_gene_id: UJ101_02205
symbol: rsgA|engC
gene_biotype: protein_coding
description:
  Putative ribosome bioproteinis GTPase RsgA; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.


ensembl_gene_id: UJ101_02206
symbol: cysM
gene_biotype: protein_coding
description:
  Belongs to the cysteine synthase/cystathionine beta- synthase family; Contains 2 CBS domains; KEGG: gpb:HDN1F_09430 cysteine synthase B.


ensembl_gene_id: UJ101_02209
symbol: APD07710.1
gene_biotype: protein_coding
description:
  Protein I'm not dead yet; Cation-independent electroneutral transporter (not associated with membrane depolarization) of a variety of tricarboxylic and dicarboxylic acid-cycle intermediates. There is also small, but detectable, transport of monocarboxylics. Transport is through the epithelium of the gut and across the plasma membranes of organs involved in intermediary metabolism and storage. Affinity for substrates is citrate > succinate > pyruvate. Fumarate, a-ketoglutarate, and glutarate are also transported, but not lactate. Transport mechanism that is not coupled to Na(+), K(+), o [...]


ensembl_gene_id: UJ101_02212
symbol: APD07713.1
gene_biotype: protein_coding
description:
  Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons. Has also weak Li(+)/H(+) antiport activity; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family.


ensembl_gene_id: UJ101_02216
symbol: APD07717.1
gene_biotype: protein_coding
description:
  4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the reversible aldol cleavage of N- acetylneuraminic acid (sialic aci; Neu5Ac) to form pyruvate and N-acetylmannosamine (ManNAc) via a Schiff base intermediate; Belongs to the DapA family. NanA subfamily; KEGG: vpa:VP1335 4-hydroxy-tetrahydrodipicolinate synthase.


ensembl_gene_id: UJ101_02217
symbol: aldH
gene_biotype: protein_coding
description:
  Aldehyde dehydrogenase (NADP(+)); Catalyzes the NAD(P)(+)-dependent oxidation of alpha- ketoglutaric semialdehyde (alphaKGSA) to alpha-ketoglutarate in the D-glutarate degradation pathway; Belongs to the aldehyde dehydrogenase family; KEGG: fco:FCOL_10760 NADP-dependent aldehyde dehydrogenase.


ensembl_gene_id: UJ101_02218
symbol: APD07719.1
gene_biotype: protein_coding
description:
  4-hydroxyproline epimerase; Catalyzes the epimerization of trans-4-hydroxy-L-proline (t4LHyp) to cis-4-hydroxy-D-proline (c4DHyp). Is likely involved in a degradation pathway that converts t4LHyp to alpha- ketoglutarate. Displays no proline racemase activity; Belongs to the proline racemase family; KEGG: psf:PSE_4633 4-hydroxyproline epimerase.


ensembl_gene_id: UJ101_02219
symbol: dadA
gene_biotype: protein_coding
description:
  D-arginine dehydrogenase; Catalyzes the oxidative deamination of D-amino acids. Has broad substrate specificit; is mostly active on D-proline, and to a lesser extent, on several other D-amino acids such as D- alanine, D-phenylalanine and D-serine. Mediates electron transport from D-proline to coenzyme Q1 in vitro, and is involved in the electron transport chain from D-proline to the c-type cytochrome in vivo; Belongs to the DadA oxidoreductase family; KEGG: bvi:Bcep1808_6677 D-amino-acid dehydrogenase.


ensembl_gene_id: UJ101_02220
symbol: APD07721.1
gene_biotype: protein_coding
description:
  xaa-Pro aminopeptidase; Belongs to the peptidase M24B family; KEGG: srd:SD10_19345 Xaa-Pro aminopeptidase.


ensembl_gene_id: UJ101_02221
symbol: APD07722.1
gene_biotype: protein_coding
description:
  Proline racemase; Catalyzes the epimerization of trans-3-hydroxy-L-proline (t3LHyp) to cis-3-hydroxy-D-proline (c3DHyp) in vitro. Can also catalyze the epimerization of trans-4-hydroxy-L-proline (t3LHyp) to cis-4-hydroxy-D-proline (c4DHyp), albeit with 3.6-fold lower efficiency. Displays no proline racemase activity; Belongs to the proline racemase family; KEGG: fbc:FB2170_06850 proline racemase.


ensembl_gene_id: UJ101_02222
symbol: ocd
gene_biotype: protein_coding
description:
  Ornithine cyclodeaminase; Catalyzes the reduction of Delta(1)-pyrroline-2- carboxylate (Pyr2C) to L-proline, using preferentially NADPH over NADH as the electron donor. Is likely involved in a degradation pathway that converts trans-3-hydroxy-L-proline (t3LHyp) to L- proline; Belongs to the ornithine cyclodeaminase/mu-crystallin family; KEGG: fbc:FB2170_06845 ornithine cyclodeaminase.


ensembl_gene_id: UJ101_02223
symbol: APD07724.1
gene_biotype: protein_coding
description:
  Prolyl tri/tetrapeptidyl aminopeptidase; Has proline-specific tripeptidyl aminopeptidase and tetrapeptidyl aminopeptidase activity. Activity is highest against tripeptides containing an Ala-Pro motif. Involved in the final processing of transglutaminase, by removing either the tetrapeptide Phe-Arg-Ala-Pro left after TAMEP or SAM-P45 hydrolysis, or the tripeptide Arg-Ala-Pro left after SGMP II hydrolysis in a single step; Belongs to the peptidase S37 family.


ensembl_gene_id: UJ101_02233
symbol: APD07733.1
gene_biotype: protein_coding
description:
  Hydroxymethylpyrimidine kinase; Is involved in the adaptive response to alkylation damage in DNA caused by alkylating agents. Repairs the methylphosphotriester lesions in DNA by a direct and irreversible transfer of the methyl group to one of its own cysteine residues. The methylation of AdaA by methylphosphotriesters in DNA leads to its activation as a transcriptional regulator that activates the transcription of the ada operon which consists of adaA and adaB, and of the adjacent gene alkA. Contains 1 HTH araC/xylS-type DNA-binding domain; KEGG: pdt:Prede_1751 hydroxymethylpyrimidine/ [...]


ensembl_gene_id: UJ101_02234
symbol: APD07734.1
gene_biotype: protein_coding
description:
  Fatty acyl-CoA reductase; Catalyzes the NADPH-dependent reduction of long chain acyl-CoA (with chain lengths of 14 to 22 carbons) to the corresponding aldehyde; Belongs to the short-chain dehydrogenases/reductases (SDR) family; KEGG: sty:STY2401 UJ101; Oxidoreductases.


ensembl_gene_id: UJ101_02239
symbol: talA|talB
gene_biotype: protein_coding
description:
  Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.


ensembl_gene_id: UJ101_02243
symbol: APD07743.1
gene_biotype: protein_coding
description:
  Glutathione transport system permease protein GsiC; Part of the ABC transporter complex GsiABCD involved in glutathione import. Probably responsible for the translocation of the substrate across the membrane (By similarity); Belongs to the binding-protein-dependent transport system permease family; Contains 1 ABC transmembrane type-1 domain.


ensembl_gene_id: UJ101_02254
symbol: pfkA|PFK
gene_biotype: protein_coding
description:
  6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.


ensembl_gene_id: UJ101_02255
symbol: APD07755.1
gene_biotype: protein_coding
description:
  Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating); Involved in the gluconeogenesis. Catalyzes the oxidative phosphorylation of glyceraldehyde 3-phosphate (G3P) to 1,3- bisphosphoglycerate (BPG) using the cofactor NADP. The first reaction step involves the formation of a hemiacetal intermediate between G3P and a cysteine residue, and this hemiacetal intermediate is then oxidized to a thioester, with concomitant reduction of NADP to NADPH. The reduced NADPH is then exchanged with the second NADP, and the thioester is attacked by a nucleophilic inorganic phosphate to produce BPG; [...]


ensembl_gene_id: UJ101_02256
symbol: APD07756.1
gene_biotype: protein_coding
description:
  HTH-type transcriptional repressor BluR; Controls the expression of several small proteins that may play a role in biofilm maturation. Binds to and represses the operator of the ycgZ-ymgA-ariR-ymgC operon and also regulates ynaK. Binding is antagonized by BluF upon blue light (470 nm) irradiation. Blue light may increase the affinity of BluF for BluR, allowing it to be released from its operator; Contains 1 HTH merR-type DNA-binding domain.


ensembl_gene_id: UJ101_02257
symbol: lytM
gene_biotype: protein_coding
description:
  Lysostaphin; A murein DD-endopeptidase with specificity for D-Ala- meso-diaminopimelic acid (mDAP) cross-links. Its role is probably to cleave D-Ala-mDAP cross-links to allow insertion of new glycans and thus cell wall expansion. Functionally redundant with MepM and MepH (By similarity); Belongs to the peptidase M23B family; Contains 1 LysM repeat; KEGG: ava:Ava_C0210 lysostaphin.


ensembl_gene_id: UJ101_02258
symbol: AARS|alaS
gene_biotype: protein_coding
description:
  alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.


ensembl_gene_id: UJ101_02263
symbol: fabD
gene_biotype: protein_coding
description:
  [Acyl-carrier-protein] S-malonyltransferase; Belongs to the FabD family; KEGG: xft:PD1504 (acyl-carrier-protein) S-malonyltransferase.


ensembl_gene_id: UJ101_02265
symbol: aroE
gene_biotype: protein_coding
description:
  Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA); Belongs to the shikimate dehydrogenase family; KEGG: chu:CHU_0006 shikimate dehydrogenase.


ensembl_gene_id: UJ101_02268
symbol: APD07768.1
gene_biotype: protein_coding
description:
  Intraflagellar transport protein 88 like protein; Involved in primary cilium biogenesis. Also involved in autophagy since it is required for trafficking of ATG16L and the expansion of the autophagic compartment (By similarity); Contains 12 TPR repeats.


ensembl_gene_id: UJ101_02274
symbol: nosZ
gene_biotype: protein_coding
description:
  Nitrous-oxide reductase is part of a bacterial respiratory system which is activated under anaerobic conditions in the presence of nitrate or nitrous oxide; Belongs to the NosZ family; In the C-terminal sectio; belongs to the cytochrome c oxidase subunit 2 family; KEGG: lbi:LEPBI_I0383 nitrous-oxide reductase.


ensembl_gene_id: UJ101_02278
symbol: APD07778.1
gene_biotype: protein_coding
description:
  Iron-chelate-transporting ATPase; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Methionine importer (TC 3.A.1.24) family; Contains 1 ABC transporter domain; KEGG: pge:LG71_21395 iron complex transport system ATP-binding protein.


ensembl_gene_id: UJ101_02283
symbol: ubiG
gene_biotype: protein_coding
description:
  2-polyprenyl-6-hydroxyphenol methylase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family; KEGG: apm:HIMB5_00011460 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase.


ensembl_gene_id: UJ101_02288
symbol: ACSS|acs
gene_biotype: protein_coding
description:
  acetate--CoA ligase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA.


ensembl_gene_id: UJ101_02289
symbol: APD07789.1
gene_biotype: protein_coding
description:
  This protein is a positive regulator for the phosphate regulon. Transcription of this operon is positively regulated by PhoB and PhoR when phosphate is limited (By similarity); Contains 1 OmpR/PhoB-type DNA-binding domain; Contains 1 response regulatory domain.


ensembl_gene_id: UJ101_02290
symbol: APD07790.1
gene_biotype: protein_coding
description:
  Sensor protein; Member of the two-component regulatory system EvgS/EvgA. Phosphorylates EvgA via a four-step phosphorelay in response to environmental signals (By similarity); Contains 1 histidine kinase domain; Contains 1 HPt domain; Contains 1 response regulatory domain; KEGG: azo:azo2412 UJ101; Phosphotransferases with a nitrogenous group as acceptor.


ensembl_gene_id: UJ101_02296
symbol: APD07796.1
gene_biotype: protein_coding
description:
  beta-N-acetylhexosaminidase; Most active towards p-nitrophenyl-N-acetyl-beta-D- glucosaminide(PNP-beta-GlcNAc) and diacetylchitobiose. Belongs to the glycosyl hydrolase 3 family; KEGG: cts:Ctha_0559 beta-N-acetylhexosaminidase.


ensembl_gene_id: UJ101_02297
symbol: APD07797.1
gene_biotype: protein_coding
description:
  Putative ribosome bioproteinis ATPase nvl; Involved in ribosome biogenesis; Belongs to the AAA ATPase family.


ensembl_gene_id: UJ101_02298
symbol: APD07798.1
gene_biotype: protein_coding
description:
  GMP synthase (glutamine-hydrolyzing); Contains 1 glutamine amidotransferase type-1 domain; KEGG: aci:ACIAD2019 GMP synthase (glutamine-hydrolysing).


ensembl_gene_id: UJ101_02303
symbol: APD07803.1
gene_biotype: protein_coding
description:
  N-acetyl-alpha-D-glucosaminyl L-malate synthase; Involved in bacillithiol (BSH) biosynthesis. Catalyzes the first step of the pathway, the formation of N- acetylglucosaminylmalate (GlcNAc-Mal) from UDP-N-acetylglucosamine (UDP-GlcNAc) and L-malate; Belongs to the glycosyltransferase group 1 family. Glycosyltransferase 4 subfamily; KEGG: saa:SAUSA300_1349 UJ101; Hexosyltransferases.


ensembl_gene_id: UJ101_02304
symbol: ACSL|fadD
gene_biotype: protein_coding
description:
  long-chain-fatty-acid--CoA ligase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family; KEGG: sesp:BN6_16370 long-chain acyl-CoA synthetase.


ensembl_gene_id: UJ101_02307
symbol: APD07807.1
gene_biotype: protein_coding
description:
  Uncharacterized protein; KEGG: phe:Phep_0237 MoxR-like ATPase; Acting on acid anhydrides; catalyzing transmembrane movement of substances.


ensembl_gene_id: UJ101_02313
symbol: NUDT7
gene_biotype: protein_coding
description:
  Nudix hydrolase 15, mitochondrial; Coenzyme A diphosphatase which mediates the cleavage of oxidized CoA. Can use malonyl-CoA, hexanoyl-CoA, lauroyl-CoA, myristoyl-CoA and palmitoyl-CoA as substrates, but not isobutyryl- CoA or propionyl-CoA. Belongs to the Nudix hydrolase family; Contains 1 nudix hydrolase domain; KEGG: mgp:100546917 peroxisomal coenzyme A diphosphatase NUDT7; In phosphorus-containing anhydrides.


ensembl_gene_id: UJ101_02316
symbol: mpl
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family; KEGG: nko:Niako_4423 UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase; Acid--amino-acid ligases (peptide synthases).


ensembl_gene_id: UJ101_02320
symbol: APD07820.1
gene_biotype: protein_coding
description:
  FAD:protein FMN transferase; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.


ensembl_gene_id: UJ101_02325
symbol: ribH|RIB4
gene_biotype: protein_coding
description:
  6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.


ensembl_gene_id: UJ101_02327
symbol: recF
gene_biotype: protein_coding
description:
  DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family.


ensembl_gene_id: UJ101_02335
symbol: lpxK
gene_biotype: protein_coding
description:
  Tetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).


ensembl_gene_id: UJ101_02336
symbol: APD07836.1
gene_biotype: protein_coding
description:
  Mechanosensitive channel that opens in response to membrane tension and specific ionic conditions. Requires high concentrations of external K(+), NH(4)(+), Rb(+) or Cs(+) to gate. May participate in the regulation of osmotic pressure changes within the cell, although it does not appear to have a major role in osmolarity regulation. Forms an ion channel of 1.0 nanosiemens conductance. The channel can remain active for between 30 seconds and over 3 minute; it does not desensitize upon extended pressure. Its activity is masked in wild-type cells by the MscS channel; Belongs to the MscS (T [...]


ensembl_gene_id: UJ101_02341
symbol: APD07841.1
gene_biotype: protein_coding
description:
  Deoxyadenosine/deoxycytidine kinase; Plays an essential role in generating the deoxyribonucleotide precursors dATP AND dCTP for DNA metabolism. The phosphate acceptor specificity is strict toward deoxyadenosine (dAdo) and deoxycytidine (dCyd). The specificity toward the sugar moiety of the nucleoside is less strict. Both 2-deoxyribose, ribose, and arabinose nucleosides are phosphorylated, although the 2-deoxyribonucleosides are preferred. The phosphate donor specificity is dependent on the deoxyribonucleoside substrate, but GTP is efficient with both deoxycytidine and deoxyadenosine. O [...]


ensembl_gene_id: UJ101_02344
symbol: APD07844.1
gene_biotype: protein_coding
description:
  D-aminoacyl-tRNA deacylase; Catalyzes the hydrolysis of D-tyrosyl-tRNA(Tyr); Belongs to the TatD-type hydrolase family. DTD3 subfamily; KEGG: fjo:Fjoh_2775 TatD DNase family protein; Endodeoxyribonucleases producing 5'-phosphomonoesters.


ensembl_gene_id: UJ101_02345
symbol: APD07845.1
gene_biotype: protein_coding
description:
  E1 ubiquitin-activating enzyme; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Also essential during biosynthesis of the molybdenum cofactor. Acts by mediating the C-terminal thiocarboxylation of sulfur carriers URM1 and MOCS2A. Its N-terminus first activates URM1 and MOCS2A as acyl-adenylates (-COAMP), then the persulfide sulfur on the catalytic cysteine is transferred to URM1 and MOCS2A to form thiocarboxylation (-COSH) of their C-terminus. The reaction probably involves hydrogen sulfide that is generated  [...]


ensembl_gene_id: UJ101_02347
symbol: APD07847.1
gene_biotype: protein_coding
description:
  Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Aliphatic sulfonates importer (TC 3.A.1.17.2) family; Contains 1 ABC transporter domain.


ensembl_gene_id: UJ101_02350
symbol: manC|cpsB
gene_biotype: protein_coding
description:
  Mannose-1-phosphate guanylyltransferase; Involved in GDP-mannose biosynthesis which serves as the activated sugar nucleotide precursor for mannose residues in cell surface polysaccharides. This enzyme participates in synthesis of the LPS O7 antigen. Belongs to the mannose-6-phosphate isomerase type 2 family; KEGG: phe:Phep_2062 mannose-1-phosphate guanylyltransferase.


ensembl_gene_id: UJ101_02354
symbol: pyrG|CTPS
gene_biotype: protein_coding
description:
  CTP synthase (glutamine hydrolyzing); Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.


ensembl_gene_id: UJ101_02355
symbol: yidC
gene_biotype: protein_coding
description:
  Membrane protein insertase YidC; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins.


ensembl_gene_id: UJ101_02357
symbol: APD07857.1
gene_biotype: protein_coding
description:
  Uncharacterized protein; In the C-terminal sectio; belongs to the PhoH family; Contains 1 PINc domain.


ensembl_gene_id: UJ101_02358
symbol: nuoF
gene_biotype: protein_coding
description:
  NADH:ubiquinone reductase (H(+)-translocating); NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient required for the synthesis of ATP. The nqo1 subunit contains the NADH-binding site and the primary electron acceptor FMN. Belongs to t [...]


ensembl_gene_id: UJ101_02359
symbol: fdoG|fdfH
gene_biotype: protein_coding
description:
  Formate dehydrogenase; In the C-terminal sectio; belongs to the prokaryotic molybdopterin-containing oxidoreductase family; Contains 1 2Fe-2S ferredoxin-type domain; Contains 2 4Fe-4S ferredoxin-type domains; Contains 1 4Fe-4S Mo/W bis-MGD-type domain; KEGG: hhy:Halhy_5329 formate dehydrogenase major subunit.


ensembl_gene_id: UJ101_02360
symbol: fdhD
gene_biotype: protein_coding
description:
  Protein FdhD like protein; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.


ensembl_gene_id: UJ101_02361
symbol: mnmC
gene_biotype: protein_coding
description:
  tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the N-terminal sectio; belongs to the methyltransferase superfamily. tRNA (mnm(5)s(2)U34)- methyltransferase family; In the C-terminal sectio; belongs to the DAO family; KEGG: tcx:T [...]


ensembl_gene_id: UJ101_02362
symbol: APD07862.1
gene_biotype: protein_coding
description:
  Branched-chain-amino-acid transaminase; Catalyzes the first reaction in the catabolism of the essential branched chain amino acids leucine, isoleucine, and valine. May also function as a transporter of branched chain alpha-keto acids. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family; KEGG: phe:Phep_0259 branched-chain amino acid aminotransferase.


ensembl_gene_id: UJ101_02363
symbol: nqrA
gene_biotype: protein_coding
description:
  Na(+)-translocating NADH-quinone reductase subunit; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol.


ensembl_gene_id: UJ101_02366
symbol: nqrD
gene_biotype: protein_coding
description:
  Electron transport complex subunit; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol; Belongs to the NqrDE/RnfAE family.


ensembl_gene_id: UJ101_02367
symbol: nqrE
gene_biotype: protein_coding
description:
  Na(+)-translocating NADH-quinone reductase subunit; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol; Belongs to the NqrDE/RnfAE family.


ensembl_gene_id: UJ101_02368
symbol: nqrF
gene_biotype: protein_coding
description:
  Na(+)-translocating NADH-quinone reductase subunit; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. The first step is catalyzed by NqrF, which accepts electrons from NADH and reduces ubiquinone-1 to ubisemiquinone by a one-electron transfer pathway.


ensembl_gene_id: UJ101_02369
symbol: map
gene_biotype: protein_coding
description:
  Methionyl aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.


ensembl_gene_id: UJ101_02371
symbol: gpmI
gene_biotype: protein_coding
description:
  Phosphoglycerate mutase (2,3-diphosphoglycerate-independent); Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.


ensembl_gene_id: UJ101_02375
symbol: APD07875.1
gene_biotype: protein_coding
description:
  UDP-glucose 4-epimerase; Mutarotase converts alpha-aldose to the beta-anomer. It is active on D-glucose, L-arabinose, D-xylose, D-galactose, maltose and lactose (By similarity); In the N-terminal sectio; belongs to the NAD(P)- dependent epimerase/dehydratase family; In the C-terminal sectio; belongs to the aldose epimerase family; KEGG: pdr:H681_04960 UDP-glucose 4-epimerase.


ensembl_gene_id: UJ101_02376
symbol: MARS|metG
gene_biotype: protein_coding
description:
  methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.


ensembl_gene_id: UJ101_02377
symbol: APD07877.1
gene_biotype: protein_coding
description:
  Peptide-methionine (R)-S-oxide reductase; Belongs to the MsrB Met sulfoxide reductase family; KEGG: age:AA314_00536 peptide-methionine (R)-S-oxide reductase.


ensembl_gene_id: UJ101_02381
symbol: cca
gene_biotype: protein_coding
description:
  CCA-adding enzyme; Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. Bacterial CCA-adding enzyme type 3 subfamily; KEGG: fps:FP1644 tRNA nucleotidyltransferase (CCA-adding enzyme); CCA tRNA nucleotidyltransferase.


ensembl_gene_id: UJ101_02382
symbol: APD07882.1
gene_biotype: protein_coding
description:
  L-threonylcarbamoyladenylate synthase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Catalyzes the conversion of L-threonine, HCO(3)(-)/CO(2) and ATP to give threonylcarbamoyl-AMP (TC-AMP) as the acyladenylate intermediate, with the release of diphosphate; Belongs to the SUA5 family. TsaC subfamily; Contains 1 YrdC-like domain; KEGG: vch:VC0054 L-threonylcarbamoyladenylate synthase.


ensembl_gene_id: UJ101_02383
symbol: wapR
gene_biotype: protein_coding
description:
  Belongs to the glycosyltransferase 2 family; KEGG: abh:M3Q_292 alpha-1,3-rhamnosyltransferase; Hexosyltransferases.


ensembl_gene_id: UJ101_02386
symbol: APD07886.1
gene_biotype: protein_coding
description:
  Protein CapL; Required for the biosynthesis of type 1 capsular polysaccharide. Belongs to the UDP-glucose/GDP-mannose dehydrogenase family; KEGG: cad:Curi_c20970 UDP-N-acetyl-D-galactosamine dehydrogenase; With NAD(+) or NADP(+) as acceptor.


ensembl_gene_id: UJ101_02389
symbol: APD07889.1
gene_biotype: protein_coding
description:
  Protein-glutamate methylesterase; Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors. Phosphorylated CheY interacts with the flagella switch components FliM and FliY, which causes counterclockwise rotation of the flagella, resulting in smooth swimming; Contains 1 response regulatory domain; KEGG: hsu:HLASF_1364 two-component system, chemotaxis family, response regulator CheB.


ensembl_gene_id: UJ101_02391
symbol: APD07891.1
gene_biotype: protein_coding
description:
  Putative methanoproteinis regulatory protein FilR2; Member of the two-component regulatory system FilI/FilRs, which is involved in the regulation of methanogenesis; Contains 1 response regulatory domain.


ensembl_gene_id: UJ101_02392
symbol: uhpB
gene_biotype: protein_coding
description:
  Histidine kinase; Member of the two-component regulatory system TmoS/TmoT involved in the regulation of toluene degradation. Probably phosphorylates TmoT via a four-step phosphorelay in response to toluene. Can also be induced by benzene and ethylbenzene; Contains 2 histidine kinase domains; Contains 2 PAC (PAS-associated C-terminal) domains; Contains 2 PAS (PER-ARNT-SIM) domains; Contains 1 response regulatory domain; KEGG: btd:BTI_3782 two-component system, NarL family, sensor histidine kinase UhpB.


ensembl_gene_id: UJ101_02395
symbol: APD07895.1
gene_biotype: protein_coding
description:
  long-chain-fatty-acid--CoA ligase; Long chain fatty acid acyl-CoA synthetases catalyze the formation of a thiester bond between a free fatty acid and coenzyme A during fatty acid metabolic process. May mediate fatty acid retrieval from the lumen of endosomes into the cytoplasm; Belongs to the ATP-dependent AMP-binding enzyme family; KEGG: doi:FH5T_05580 long-chain acyl-CoA synthetase.


ensembl_gene_id: UJ101_02396
symbol: APD07896.1
gene_biotype: protein_coding
description:
  Alpha-glucosidase; Is able to hydrolyze various linear maltooligosaccharides (maltotriose to maltoheptaose) and cyclomaltodextrins (CDs), to mainly glucose and maltose, by liberating glucose from the reducing end of the molecules. Shows a very weak activity on starch. Can neither hydrolyze maltose nor degrade pullulan, but rapidly hydrolyzes acarbose, a strong amylase and glucosidase inhibitor, to acarviosine and glucose; Belongs to the glycosyl hydrolase 13 family; KEGG: bfi:CIY_05460 alpha-glucosidase.


ensembl_gene_id: UJ101_02397
symbol: addA
gene_biotype: protein_coding
description:
  ATP-dependent helicase/nuclease subunit; The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. The AddA nuclease domain is required for chi fragment generatio; this subunit has the helicase and 3' -> 5' nuclease activities; Belongs to the helicase family. AddA subfamily; Contains 1 uvrD-like helicase ATP-binding domain; Contains 1 uvrD-like helicase C-terminal domain; KEGG: blh:BaLi_c12840 ATP-dependent helicas [...]


ensembl_gene_id: UJ101_02398
symbol: lysA
gene_biotype: protein_coding
description:
  Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.


ensembl_gene_id: UJ101_02399
symbol: APD07899.1
gene_biotype: protein_coding
description:
  Belongs to the glycosyl hydrolase 13 family; KEGG: vap:Vapar_1983 maltooligosyltrehalose trehalohydrolase.


ensembl_gene_id: UJ101_02402
symbol: ald
gene_biotype: protein_coding
description:
  Alanine dehydrogenase; May play a role in cell wall synthesis as L-alanine is an important constituent of the peptidoglycan layer; Belongs to the AlaDH/PNT family; KEGG: gfo:GFO_1781 alanine dehydrogenase.


ensembl_gene_id: UJ101_02403
symbol: APD07902.1
gene_biotype: protein_coding
description:
  tRNA threonylcarbamoyladenosine biosynthesis protein TsaE; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaD and TsaB. TsaE seems to play an indirect role in the t(6)A biosynthesis pathway, possibly in regulating the core enzymatic function of TsaD (By similarity); Belongs to the TsaE family.


ensembl_gene_id: UJ101_02404
symbol: APD07903.1
gene_biotype: protein_coding
description:
  Member of the two-component regulatory system AlgB/KinB involved in regulation of alginate biosynthesis genes. Positive regulator of the alginate biosynthetic gene AlgD. Contains 1 response regulatory domain; Contains 1 sigma-54 factor interaction domain.


ensembl_gene_id: UJ101_02405
symbol: APD07904.1
gene_biotype: protein_coding
description:
  Deoxynucleoside triphosphate triphosphohydrolase SAMHD1; Host restriction nuclease that blocks early-stage virus replication. May function by reducing the cellular dNTP levels to levels too low for viral reverse transcription to occur (By similarity); Belongs to the SAMHD1 family; Contains 1 HD domain; Contains 1 SAM (sterile alpha motif) domain.


ensembl_gene_id: UJ101_02406
symbol: lpxD
gene_biotype: protein_coding
description:
  UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily.


ensembl_gene_id: UJ101_02407
symbol: lpxC-fabZ
gene_biotype: protein_coding
description:
  UDP-3-O-acyl-N-acetylglucosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the thioester dehydratase family. FabZ subfamily.


ensembl_gene_id: UJ101_02408
symbol: lpxA
gene_biotype: protein_coding
description:
  acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: UJ101_02409
symbol: efp
gene_biotype: protein_coding
description:
  Elongation factor; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.


ensembl_gene_id: UJ101_02410
symbol: APD07909.1
gene_biotype: protein_coding
description:
  UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell; Belongs to the transferase hexapeptide repeat family. LpxD subfamily; KEGG: coc:Coch_1759 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase.


ensembl_gene_id: UJ101_02411
symbol: sucD
gene_biotype: protein_coding
description:
  succinate--CoA ligase (ADP-forming); Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.


ensembl_gene_id: UJ101_02419
symbol: ribBA
gene_biotype: protein_coding
description:
  3,4-dihydroxy-2-butanone-4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.


ensembl_gene_id: UJ101_02422
symbol: APD07921.1
gene_biotype: protein_coding
description:
  DNA translocase FtsK; Essential cell division protein that coordinates cell division and chromosome segregation. The N-terminus is involved in assembly of the cell-division machinery. The C-terminus functions as a DNA motor that moves dsDNA in an ATP-dependent manner towards the dif recombination site, which is located within the replication terminus region. Required for activation of the Xer recombinase, allowing activation of chromosome unlinking by recombination (By similarity); Belongs to the FtsK/SpoIIIE/SftA family; Contains 1 FtsK domain.


ensembl_gene_id: UJ101_02423
symbol: malQ
gene_biotype: protein_coding
description:
  4-alpha-glucanotransferase; Cytosolic alpha-glucanotransferase essential for the cytosolic metabolism of maltose, an intermediate on the pathway by which starch is converted to sucrose in leaves at night. Metabolizes maltose exported from the chloroplast and is specific for beta-maltose. May play a role in freezing tolerance. Temperature drop induces inactivation of DPE2 that leads to rapid accumulation of maltose, a solute that protects cells from freezing damage; Belongs to the disproportionating enzyme family; Contains 2 CBM20 (carbohydrate binding type-20) domains; KEGG: ppn:Palpr_ [...]


ensembl_gene_id: UJ101_02426
symbol: ligA|ligB
gene_biotype: protein_coding
description:
  DNA ligase (NAD(+)); DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA.


ensembl_gene_id: UJ101_02430
symbol: NAPEPLD
gene_biotype: protein_coding
description:
  To K.pneumoniae RomA; KEGG: gtt:GUITHDRAFT_93321 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D.


ensembl_gene_id: UJ101_02437
symbol: menA
gene_biotype: protein_coding
description:
  1,4-dihydroxy-2-naphthoate octaprenyltransferase; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily.


ensembl_gene_id: UJ101_02439
symbol: gltD
gene_biotype: protein_coding
description:
  Glutamate synthase (NADPH); Forms L-glutamate from L-glutamine and 2-oxoglutarate. Represents an alternative pathway to L-glutamate dehydrogenase for the biosynthesis of L-glutamate. Participates with glutamine synthetase in ammonia assimilation processes. The enzyme is specific for NADH, L-glutamine and 2-oxoglutarate (By similarity); Belongs to the glutamate synthase family; Contains 1 glutamine amidotransferase type-2 domain; KEGG: rso:RSc2964 glutamate synthase (NADPH/NADH) small chain.


ensembl_gene_id: UJ101_02440
symbol: APD07939.1
gene_biotype: protein_coding
description:
  Glutamate synthase (ferredoxin); Forms L-glutamate from L-glutamine and 2-oxoglutarate. Represents an alternative pathway to L-glutamate dehydrogenase for the biosynthesis of L-glutamate. Participates with glutamine synthetase in ammonia assimilation processes. The enzyme is specific for NADH, L-glutamine and 2-oxoglutarate; Belongs to the glutamate synthase family; Contains 1 glutamine amidotransferase type-2 domain; KEGG: rrs:RoseRS_2985 glutamate synthase (ferredoxin).


ensembl_gene_id: UJ101_02442
symbol: parC
gene_biotype: protein_coding
description:
  DNA topoisomerase 4 subunit; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the topoisomerase GyrA/ParC subunit family. ParC type 1 subfamily; KEGG: coc:Coch_0441 topoisomerase IV subunit A; Other isomerases.


ensembl_gene_id: UJ101_02444
symbol: parE
gene_biotype: protein_coding
description:
  DNA topoisomerase 4 subunit; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule (By similarity); Belongs to the type II topoisomerase family; Contains 1 Toprim domain; KEGG: chz:CHSO_3012 topoisomerase IV subunit B; Other isomerases.


ensembl_gene_id: UJ101_02445
symbol: APD07944.1
gene_biotype: protein_coding
description:
  Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA and requires TrkE for transport activity (By similarity); Belongs to the TrkH potassium transport family.


ensembl_gene_id: UJ101_02446
symbol: APD07945.1
gene_biotype: protein_coding
description:
  Trk system potassium uptake protein TrkA; Part of a potassium transport system; Contains 2 RCK C-terminal domains; Contains 2 RCK N-terminal domains.


ensembl_gene_id: UJ101_02447
symbol: HARS|hisS
gene_biotype: protein_coding
description:
  histidine--tRNA ligase; Belongs to the class-II aminoacyl-tRNA synthetase family; KEGG: pgi:PG2062 histidyl-tRNA synthetase.


ensembl_gene_id: UJ101_02449
symbol: pepT
gene_biotype: protein_coding
description:
  Tripeptide aminopeptidase; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family.


ensembl_gene_id: UJ101_02452
symbol: surA
gene_biotype: protein_coding
description:
  Peptidylprolyl isomerase; Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation; Contains 2 PpiC domains; KEGG: ran:Riean_1554 peptidyl-prolyl cis-trans isomerase SurA.


ensembl_gene_id: UJ101_02453
symbol: APD07952.1
gene_biotype: protein_coding
description:
  ATP-binding RNA helicase required for normal differentiation and development; Belongs to the DEAD box helicase family. DDX19/DBP5 subfamily; Contains 1 helicase ATP-binding domain; Contains 1 helicase C-terminal domain; KEGG: bfs:BF9343_0133 ATP-dependent RNA helicase DeaD.


ensembl_gene_id: UJ101_02459
symbol: napA
gene_biotype: protein_coding
description:
  Nitrate reductase; Catalytic subunit of the nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite.


ensembl_gene_id: UJ101_02461
symbol: moeA
gene_biotype: protein_coding
description:
  Molybdopterin molybdotransferase; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.


ensembl_gene_id: UJ101_02462
symbol: APD07961.1
gene_biotype: protein_coding
description:
  Transcriptional regulator ModE; The ModE-Mo complex acts as a repressor of the modABC operon, involved in the transport of molybdate. Upon binding molybdate, the conformation of the protein changes, promoting dimerization of ModE-Mo. The protein dimer is then competent to bind a DNA region, upstream of the modABC operon. Acts also as an enhancer of the expression of genes coding for molybdoenzymes, both directly and indirectly (By similarity); Belongs to the ModE family.


ensembl_gene_id: UJ101_02464
symbol: mobA
gene_biotype: protein_coding
description:
  Molybdenum cofactor guanylyltransferase; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor; Belongs to the MobA family.


ensembl_gene_id: UJ101_02466
symbol: APD07965.1
gene_biotype: protein_coding
description:
  SAMP-activating enzyme E1; Likely activates multiple ubiquitin-like SAMPs for protein conjugation as well as for sulfur transfer, via ATP- dependent adenylation at their C-terminus. In fact, it is required for the formation of all three SAMP1-, SAMP2- and SAMP3-protein conjugates, and for molybdenum cofactor (MoCo) biosynthesis and thiolation of tRNAs; Belongs to the HesA/MoeB/ThiF family.


ensembl_gene_id: UJ101_02467
symbol: MOCS2|moaE
gene_biotype: protein_coding
description:
  Catalytic subunit of the molybdopterin synthase complex, a complex that catalyzes the conversion of precursor Z into molybdopterin. Acts by mediating the incorporation of 2 sulfur atoms from thiocarboxylated MOCS2A into precursor Z to generate a dithiolene group; Belongs to the MoaE family. MOCS2B subfamily; KEGG: shg:Sph21_0143 molybdopterin synthase catalytic subunit.


ensembl_gene_id: UJ101_02468
symbol: moaC
gene_biotype: protein_coding
description:
  Cyclic pyranopterin phosphate synthase; Together with MoaA, is involved in the conversion of 5'- GTP to cyclic pyranopterin monophosphate (cPMP or molybdopterin precursor Z); Belongs to the MoaC family; KEGG: gfo:GFO_0453 cyclic pyranopterin phosphate synthase.


ensembl_gene_id: UJ101_02469
symbol: MOCS1|moaA
gene_biotype: protein_coding
description:
  Cyclic pyranopterin phosphate synthase; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate; Belongs to the radical SAM superfamily. MoaA family.


ensembl_gene_id: UJ101_02472
symbol: torZ
gene_biotype: protein_coding
description:
  trimethylamine-N-oxide reductase (cytochrome c); Reduces trimethylamine-N-oxide (TMAO) into trimethylamin; an anaerobic reaction coupled to energy-yielding reactions; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family; KEGG: mpq:ABA45_06340 trimethylamine-N-oxide reductase (cytochrome c).


ensembl_gene_id: UJ101_02474
symbol: APD07973.1
gene_biotype: protein_coding
description:
  Putative N-acetyltransferase. May act on ribosomal proteins (Potential); Belongs to the acetyltransferase family; Contains 1 N-acetyltransferase domain; KEGG: myr:MYRA21_2685 ribosomal-protein-alanine N-acetyltransferase.


ensembl_gene_id: UJ101_02475
symbol: APD07974.1
gene_biotype: protein_coding
description:
  Hydrolase MtnU; May be involved in a regulatory step in the methylthioribose (MTR) recycling pathway; Belongs to the carbon-nitrogen hydrolase superfamily. NIT1/NIT2 family; Contains 1 CN hydrolase domain.


ensembl_gene_id: UJ101_02476
symbol: menD
gene_biotype: protein_coding
description:
  2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acidynthase; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Belongs to the TPP enzyme family. MenD subfamily.


ensembl_gene_id: UJ101_02477
symbol: APD07976.1
gene_biotype: protein_coding
description:
  Thioredoxin-disulfide reductase; Catalyzes the conversion of D-glucosaminate (GlcNA) to 2-keto-3-deoxy-D-gluconic acid (KDGA) and ammonia; Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family; KEGG: rbi:RB2501_00781 thioredoxin reductase (NADPH).


ensembl_gene_id: UJ101_02480
symbol: rumA
gene_biotype: protein_coding
description:
  Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. RlmD subfamily; Contains 1 TRAM domain; KEGG: mlt:VC82_2408 23S rRNA (uracil1939-C5)-methyltransferase.


ensembl_gene_id: UJ101_02491
symbol: APD07990.1
gene_biotype: protein_coding
description:
  Lysozyme; Helps to release the mature phage particles from the cell wall by breaking down the peptidoglycan; Belongs to the glycosyl hydrolase 24 family; Contains 2 LysM repeats; KEGG: sno:Snov_2810 lysozyme.


ensembl_gene_id: UJ101_02495
symbol: APD07994.1
gene_biotype: protein_coding
description:
  Protein MucA; Involved in UV protection and mutation. Belongs to the peptidase S24 family; KEGG: din:Selin_1933 DNA polymerase V; Serine endopeptidases.


ensembl_gene_id: UJ101_02499
symbol: prfB
gene_biotype: protein_coding
description:
  Peptide chain release factor; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.


ensembl_gene_id: UJ101_02500
symbol: sdaA
gene_biotype: protein_coding
description:
  L-serine ammonia-lyase; Deaminates also threonine, particularly when it is present in high concentration. Belongs to the iron-sulfur dependent L-serine dehydratase family; KEGG: spe:Spro_2810 L-serine dehydratase.


ensembl_gene_id: UJ101_02504
symbol: APD08003.1
gene_biotype: protein_coding
description:
  8-oxo-dGTP diphosphatase; Mediates the hydrolysis of some nucleoside diphosphate derivatives. Its substrate specificity is unclear. In vitro, it can use NTP, dNTP, 8-oxo-GTP, 8-oxo-dGTP, dGTP, dATP, dTTP or dihydroneopterin triphosphate (DHNTP) as substrate. Has some NADH pyrophosphatase activity in vitr; however, such activity may not be relevant in vivo due to the high concentration of manganese used during the experiments. Plays an important role in protection against oxidative DNA and RNA damage by removing oxidatively damaged form of guanine; Belongs to the Nudix hydrolase family; [...]


ensembl_gene_id: UJ101_02506
symbol: APD08005.1
gene_biotype: protein_coding
description:
  Histidine kinase; Member of the two-component regulatory system RprX/RprY. May activate RprY by phosphorylation. Contains 1 histidine kinase domain; KEGG: syp:SYNPCC7002_A2835 two-component system, unclassified family, sensor histidine kinase and response regulator.


ensembl_gene_id: UJ101_02511
symbol: APD08010.1
gene_biotype: protein_coding
description:
  Non-specific serine/threonine protein kinase; May function as a calcium-binding protein. Contains 21 TSP type-3 repeats; KEGG: saci:Sinac_4765 titin.


ensembl_gene_id: UJ101_02522
symbol: ychF
gene_biotype: protein_coding
description:
  Ribosome-binding ATPase YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.


ensembl_gene_id: UJ101_02523
symbol: tktA|tktB
gene_biotype: protein_coding
description:
  Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate; Belongs to the transketolase family; KEGG: cpi:Cpin_0391 transketolase.


ensembl_gene_id: UJ101_02526
symbol: APD08025.1
gene_biotype: protein_coding
description:
  Transketolase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily; KEGG: smup:SMPSPU_058 transketolase.


ensembl_gene_id: UJ101_02534
symbol: folA
gene_biotype: protein_coding
description:
  Dihydrofolate reductase; Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis.


ensembl_gene_id: UJ101_02535
symbol: APD08034.1
gene_biotype: protein_coding
description:
  Beta-ketoacyl-[acyl-carrier-protein] synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and/or straight-chain of fatty acids; Belongs to the FabH family; KEGG: eol:Emtol_0996 3-oxoacyl-(ac [...]


ensembl_gene_id: UJ101_02537
symbol: TDH
gene_biotype: protein_coding
description:
  L-threonine 3-dehydrogenase; Belongs to the NAD(P)-dependent epimerase/dehydratase family; KEGG: psoj:PHYSODRAFT_246627 threonine 3-dehydrogenase.


ensembl_gene_id: UJ101_02538
symbol: APD08037.1
gene_biotype: protein_coding
description:
  Inositol 2-dehydrogenase; Glycosidase (By similarity). Has no alpha-N- acetylgalactosaminidase activity; Belongs to the Gfo/Idh/MocA family. Glycosyl hydrolase 109 subfamily; KEGG: ecq:ECED1_0304 myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase.


ensembl_gene_id: UJ101_02540
symbol: APD08039.1
gene_biotype: protein_coding
description:
  Lipoamide dehydrogenase is a component of the alpha- ketoacid dehydrogenase complexes; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family; KEGG: pael:T223_13385 dihydrolipoamide dehydrogenase.


ensembl_gene_id: UJ101_02552
symbol: kptA
gene_biotype: protein_coding
description:
  Putative RNA 2'-phosphotransferase; Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''- cyclic phosphate (APPR>P). May function as an ADP-ribosylase.


ensembl_gene_id: UJ101_02563
symbol: dnaB
gene_biotype: protein_coding
description:
  DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.


ensembl_gene_id: UJ101_02565
symbol: APD08063.1
gene_biotype: protein_coding
description:
  Catalase; Decomposes hydrogen peroxide into water and oxyge; serves to protect cells from the toxic effects of hydrogen peroxide; Belongs to the catalase family; KEGG: pfq:QQ39_11975 catalase.


ensembl_gene_id: UJ101_02566
symbol: APD08064.1
gene_biotype: protein_coding
description:
  Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide. Belongs to the catalase family; KEGG: nfa:nfa55390 catalase.


ensembl_gene_id: UJ101_02570
symbol: aroB
gene_biotype: protein_coding
description:
  3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).


ensembl_gene_id: UJ101_02571
symbol: PRODH
gene_biotype: protein_coding
description:
  Proline dehydrogenase 1, mitochondrial; Converts proline to delta-1-pyrroline-5-carboxylate; Belongs to the proline oxidase family; KEGG: fjo:Fjoh_2814 proline dehydrogenase; Acting on the CH-NH group of donors.


ensembl_gene_id: UJ101_02574
symbol: APD08072.1
gene_biotype: protein_coding
description:
  Membrane alanyl aminopeptidase; Appears to have a role in the catabolic pathway of the renin-angiotensin system. Probably plays a role in regulating growth and differentiation of early B-lineage cells (By similarity); Belongs to the peptidase M1 family; KEGG: ran:Riean_0608 aminopeptidase N.


ensembl_gene_id: UJ101_02577
symbol: panB
gene_biotype: protein_coding
description:
  3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family.


ensembl_gene_id: UJ101_02581
symbol: iscS|NFS1
gene_biotype: protein_coding
description:
  Cysteine desulfurase; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily; KEGG: hpy:HP0220 cysteine desulfurase.


ensembl_gene_id: UJ101_02583
symbol: APD08081.1
gene_biotype: protein_coding
description:
  Putative multidrug resistance protein NorM; Multidrug efflux pump; Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family.


ensembl_gene_id: UJ101_02590
symbol: APD08088.1
gene_biotype: protein_coding
description:
  Phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent); Catalyzes the interconversion between glucose-6- phosphate and alpha-glucose-1-phosphate. This is the first step in the biosynthesis of diglucosyl-diacylglycerol (Glc2-DAG), i.e. the predominant glycolipid found in B.subtilis membrane, which is also used as a membrane anchor for lipoteichoic acid (LTA). Has a role in the biosynthesis of all phosphate-containing envelope polymers, since glucose-1-phosphate is the precursor of UDP-glucose, which serves as a glucosyl donor not only for the biosynthesis of LTA but also for wa [...]


ensembl_gene_id: UJ101_02592
symbol: APD08090.1
gene_biotype: protein_coding
description:
  Dolichyl-phosphate beta-D-mannosyltransferase; Involved in O antigen modification. Catalyzes the transfer of the glucose residue from UDP-glucose to a lipid carrier (By similarity); Belongs to the glycosyltransferase 2 family. GtrB subfamily; KEGG: bex:A11Q_1470 dolichol-phosphate mannosyltransferase.


ensembl_gene_id: UJ101_02595
symbol: APD08093.1
gene_biotype: protein_coding
description:
  Alpha-hemolysin translocation ATP-binding protein HlyB; Part of the ABC transporter complex HlyBD involved in hemolysin export. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation (By similarity); Belongs to the ABC transporter superfamily. Protein-1 exporter (TC 3.A.1.109) family; Contains 1 ABC transmembrane type-1 domain; Contains 1 ABC transporter domain; Contains 1 peptidase C39 domain.


ensembl_gene_id: UJ101_02598
symbol: APD08096.1
gene_biotype: protein_coding
description:
  Serine-type D-Ala-D-Ala carboxypeptidase; Belongs to the beta-lactamase family; KEGG: rhb:NY08_3826 D-alanyl-D-alanine carboxypeptidase.


ensembl_gene_id: UJ101_02603
symbol: pabB
gene_biotype: protein_coding
description:
  Belongs to the anthranilate synthase component I family; KEGG: fbr:FBFL15_1434 para-aminobenzoate synthetase component I.


ensembl_gene_id: UJ101_02604
symbol: APD08102.1
gene_biotype: protein_coding
description:
  Transketolase; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3) (By similarity); KEGG: chu:CHU_1992 transketolase.


ensembl_gene_id: UJ101_02606
symbol: rho
gene_biotype: protein_coding
description:
  Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.


ensembl_gene_id: UJ101_02607
symbol: tpx
gene_biotype: protein_coding
description:
  Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Tpx subfamily.


ensembl_gene_id: UJ101_02608
symbol: purL|PFAS
gene_biotype: protein_coding
description:
  Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from Pur [...]


ensembl_gene_id: UJ101_02609
symbol: purE
gene_biotype: protein_coding
description:
  5-(carboxyamino)imidazole ribonucleotide mutase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).


ensembl_gene_id: UJ101_02610
symbol: purC
gene_biotype: protein_coding
description:
  Phosphoribosylaminoimidazolesuccinocarboxamide synthase; Belongs to the SAICAR synthetase family; KEGG: ecn:Ecaj_0713 phosphoribosylaminoimidazole-succinocarboxamide synthase.


ensembl_gene_id: UJ101_02612
symbol: purF
gene_biotype: protein_coding
description:
  Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.


ensembl_gene_id: UJ101_02614
symbol: purM
gene_biotype: protein_coding
description:
  Belongs to the AIR synthase family; KEGG: cpe:CPE0684 phosphoribosylformylglycinamidine cyclo-ligase.


ensembl_gene_id: UJ101_02618
symbol: argB
gene_biotype: protein_coding
description:
  Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.


ensembl_gene_id: UJ101_02620
symbol: argF
gene_biotype: protein_coding
description:
  N-succinylornithine carbamoyltransferase; Catalyzes the conversion of N-acetylornithine to N- acetylcitrulline in an alternative arginine biosynthesis pathway. The enzyme has no activity with ornithine. Belongs to the ATCase/OTCase family; KEGG: nko:Niako_5692 N-succinyl-L-ornithine transcarbamylase.


ensembl_gene_id: UJ101_02624
symbol: APD08122.1
gene_biotype: protein_coding
description:
  Putative transporter; Probable amino-acid or metabolite transport protein; Belongs to the amino acid-polyamine-organocation (APC) superfamily.


ensembl_gene_id: UJ101_02625
symbol: APD08123.1
gene_biotype: protein_coding
description:
  Carbamoyl-phosphate synthase (glutamine-hydrolyzing); Belongs to the CarB family; Contains 2 ATP-grasp domains; KEGG: das:Daes_1204 carbamoyl-phosphate synthase large subunit.


ensembl_gene_id: UJ101_02626
symbol: carA|CPA1
gene_biotype: protein_coding
description:
  Carbamoyl-phosphate synthase (glutamine-hydrolyzing); Involved in arginine biosynthesis; Belongs to the CarA family; Contains 1 glutamine amidotransferase type-1 domain; KEGG: gvi:gll3543 carbamoyl-phosphate synthase small subunit.


ensembl_gene_id: UJ101_02627
symbol: APD08125.1
gene_biotype: protein_coding
description:
  Acetylornithine transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily; KEGG: bth:BT_3758 acetylornithine aminotransferase.


ensembl_gene_id: UJ101_02628
symbol: argC
gene_biotype: protein_coding
description:
  N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.


ensembl_gene_id: UJ101_02629
symbol: argG|ASS1
gene_biotype: protein_coding
description:
  Belongs to the argininosuccinate synthase family. Type 1 subfamily; KEGG: ppn:Palpr_1897 argininosuccinate synthase.


ensembl_gene_id: UJ101_02632
symbol: afuC|fbpC
gene_biotype: protein_coding
description:
  Fe(3+)-transporting ATPase; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates; Belongs to the ABC transporter superfamily. Energy- coupling factor EcfA family; Contains 1 ABC transporter domain; KEGG: ter:Tery_3222 iron(III) transport system ATP-binding protein.


ensembl_gene_id: UJ101_02634
symbol: rplT
gene_biotype: protein_coding
description:
  50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.


ensembl_gene_id: UJ101_02636
symbol: APD08134.1
gene_biotype: protein_coding
description:
  Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins; Belongs to the IF-3 family.


ensembl_gene_id: UJ101_02637
symbol: TARS|thrS
gene_biotype: protein_coding
description:
  threonine--tRNA ligase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr).


ensembl_gene_id: UJ101_02640
symbol: tgt|QTRT1
gene_biotype: protein_coding
description:
  tRNA-guanine(34) transglycosylase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form [...]


ensembl_gene_id: UJ101_02642
symbol: APD08140.1
gene_biotype: protein_coding
description:
  Betaine transporter dependent on Na(+) and Cl(-) ions that functions primarily in the epidermis to clear betaine from the extracellular space. Elicits current in response to betaine but not in response to GABA, L-carnitine, sarcosine, glycine or dimethylglycine; Belongs to the sodium:neurotransmitter symporter (SNF) family.


ensembl_gene_id: UJ101_02643
symbol: idsA
gene_biotype: protein_coding
description:
  Dimethylallyltranstransferase; Belongs to the FPP/GGPP synthase family; KEGG: mmh:Mmah_1553 geranylgeranyl diphosphate synthase, type I.


ensembl_gene_id: UJ101_02647
symbol: APD08145.1
gene_biotype: protein_coding
description:
  Swarming motility protein SwrC; Required for self-resistance to surfactin, an antimicrobial lipopeptide surfactant produced by B.subtilis. Also required for swarming motility; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: UJ101_02648
symbol: APD08146.1
gene_biotype: protein_coding
description:
  Ribonucleoside-diphosphate reductase; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen.


ensembl_gene_id: UJ101_02651
symbol: APD08149.1
gene_biotype: protein_coding
description:
  RNA polymerase sigma factor SigZ; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: UJ101_02652
symbol: APD08150.1
gene_biotype: protein_coding
description:
  Catalyzes the transformation of cystathionine to homocysteine; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. MalY/PatB cystathionine beta-lyase subfamily; KEGG: btn:BTF1_31991 cystathione beta-lyase.


ensembl_gene_id: UJ101_02653
symbol: APD08151.1
gene_biotype: protein_coding
description:
  Putative oxidoreductase CzcO; Involved in potassium and divalent cation transport. Enhances the transport activity of the cation/potassium transporter CzcD (By similarity).


ensembl_gene_id: UJ101_02654
symbol: trmA
gene_biotype: protein_coding
description:
  tRNA (uracil(54)-C(5))-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family; KEGG: mmo:MMOB5020 tRNA (uracil-5-)-methyltransferase.


ensembl_gene_id: UJ101_02656
symbol: APD08154.1
gene_biotype: protein_coding
description:
  Membrane alanyl aminopeptidase; Proteases F1, F2 and F3 degrade oligopeptides produced by Tricorn (themselves probably produced by the proteasome), yielding free amino acids. Belongs to the peptidase M1 family; KEGG: ipa:Isop_1379 aminopeptidase N.


ensembl_gene_id: UJ101_02658
symbol: CPD
gene_biotype: protein_coding
description:
  Metallocarboxypeptidase D; Extracellular metalloprotease that contributes to pathogenicity; Belongs to the peptidase M14 family; KEGG: dpp:DICPUDRAFT_37244 carboxypeptidase D.


ensembl_gene_id: UJ101_02662
symbol: APD08160.1
gene_biotype: protein_coding
description:
  C4-dicarboxylate transport protein; Responsible for the transport of dicarboxylates such as succinate, fumarate, and malate from the periplasm across the membrane; Belongs to the sodium:dicarboxylate (SDF) symporter (TC 2.A.23) family.


ensembl_gene_id: UJ101_02664
symbol: uvrB
gene_biotype: protein_coding
description:
  uvrABC system protein; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and t [...]


ensembl_gene_id: UJ101_02665
symbol: cshB
gene_biotype: protein_coding
description:
  DEAD-box RNA helicase. Probably has an RNA-dependent ATPase activity and a 3' to 5' RNA helicase activity that uses the energy of ATP hydrolysis to destabilize and unwind short RNA duplexes; Contains 1 helicase ATP-binding domain; Contains 1 helicase C-terminal domain; KEGG: mpe:MYPE8030 ATP-dependent RNA helicase CshB.


ensembl_gene_id: UJ101_02666
symbol: IRC3
gene_biotype: protein_coding
description:
  51.5 kDa protein; May play a role in either regulating bacteriophages replication or specifying expression of its own genes. Contains 1 helicase ATP-binding domain; Contains 1 helicase C-terminal domain; KEGG: rbi:RB2501_14989 ATP-dependent helicase IRC3; Acting on ATP; involved in cellular and subcellular movement.


ensembl_gene_id: UJ101_02673
symbol: degP|htrA
gene_biotype: protein_coding
description:
  Peptidase Do; A putative protease, its function overlaps that of the related putative proteases HhoB and HtrA; Belongs to the peptidase S1C family; Contains 1 PDZ (DHR) domain; KEGG: mbs:MRBBS_2655 serine protease Do.


ensembl_gene_id: UJ101_02674
symbol: dapF
gene_biotype: protein_coding
description:
  Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.


ensembl_gene_id: UJ101_02676
symbol: mltG
gene_biotype: protein_coding
description:
  UPF0755 protein YceG; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation.


ensembl_gene_id: UJ101_02683
symbol: amiA|amiB|amiC
gene_biotype: protein_coding
description:
  N-acetylmuramoyl-L-alanine amidase; Autolysins are cell wall hydrolases involved in some important biological processes such as cell separation, cell-wall turnover, competence for genetic transformation, formation of the flagella - in particular of its basal body - and sporulation. Has a high affinity for teichoic acid-endowed peptidoglycan. LytC is required for efficient swarming motility but not at the level of cell separation or flagellum biosynthesis. Rather, LytC appears to be important for proper flagellar function; Belongs to the N-acetylmuramoyl-L-alanine amidase 3 family; KEGG [...]


ensembl_gene_id: UJ101_02685
symbol: APD08183.1
gene_biotype: protein_coding
description:
  Uncharacterized protein; Contains 2 4Fe-4S ferredoxin-type domains; KEGG: gfo:GFO_1637 UJ101; Oxidoreductases.


ensembl_gene_id: UJ101_02687
symbol: glcD
gene_biotype: protein_coding
description:
  (S)-2-hydroxy-acid oxidase; Contains 2 4Fe-4S ferredoxin-type domains; KEGG: dti:Desti_0036 glycolate oxidase.


ensembl_gene_id: UJ101_02688
symbol: ndh
gene_biotype: protein_coding
description:
  Alternative NADH-ubiquinone oxidoreductase which catalyzes the oxidation of mitochondrial NADH does not translocate protons across the inner mitochondrial membrane (By similarity). Calcium-dependent NAD(P)H dehydrogenas; more efficient on NADH. Binds calcium ions; Belongs to the NADH dehydrogenase family; Contains 1 EF-hand domain; KEGG: saci:Sinac_3357 NADH dehydrogenase.


ensembl_gene_id: UJ101_02689
symbol: cbiX
gene_biotype: protein_coding
description:
  Catalyzes the insertion of Co(2+) into sirohydrochlorin as part of the anaerobic pathway to cobalamin biosynthesis; Belongs to the CbiX family. CbiXS subfamily; KEGG: taf:THA_1066 sirohydrochlorin cobaltochelatase.


ensembl_gene_id: UJ101_02692
symbol: APD08190.1
gene_biotype: protein_coding
description:
  Resolvase/recombinase; Site-specific recombination protein; Belongs to the site-specific recombinase resolvase family; Contains 1 resolvase/invertase-type recombinase catalytic domain.


ensembl_gene_id: UJ101_02693
symbol: APD08191.1
gene_biotype: protein_coding
description:
  Histidine kinase; Member of the two-component regulatory system LytS/LytT that probably regulates genes involved in cell wall metabolism. Contains 1 GAF domain; Contains 1 histidine kinase domain; KEGG: pbd:PBOR_13635 two-component system, sensor histidine kinase YesM.


ensembl_gene_id: UJ101_02698
symbol: APD08196.1
gene_biotype: protein_coding
description:
  Serine-type D-Ala-D-Ala carboxypeptidase; Its precise function is unknown. Has no penicillin- binding activity and is not involved in methicillin resistance; KEGG: bcz:BCZK2932 D-alanyl-D-alanine carboxypeptidase.


ensembl_gene_id: UJ101_02700
symbol: APD08198.1
gene_biotype: protein_coding
description:
  Gluconate 5-dehydrogenase; Catalyzes a reversible reduction of 5-ketoglutanate to form D-gluconate. Dependent on NADP, almost inactive with NAD (By similarity); Belongs to the short-chain dehydrogenases/reductases (SDR) family; KEGG: sei:SPC_4615 gluconate 5-dehydrogenase.


ensembl_gene_id: UJ101_02703
symbol: thiC
gene_biotype: protein_coding
description:
  Phosphomethylpyrimidine synthase; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. Belongs to the ThiC family.


ensembl_gene_id: UJ101_02705
symbol: APD08203.1
gene_biotype: protein_coding
description:
  Catalyzes the phosphorylation of hydroxymethylpyrimidine phosphate (HMP-P) to HMP-PP, and also probably that of HMP to HMP- P; In the N-terminal sectio; belongs to the ThiD family; In the C-terminal sectio; belongs to the thiaminase-2 family; KEGG: nmo:Nmlp_3884 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase.


ensembl_gene_id: UJ101_02706
symbol: thiE-2
gene_biotype: protein_coding
description:
  Thiamine phosphate synthase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.


ensembl_gene_id: UJ101_02707
symbol: thiG
gene_biotype: protein_coding
description:
  Thiazole synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.


ensembl_gene_id: UJ101_02708
symbol: thiH
gene_biotype: protein_coding
description:
  2-iminoacetate synthase; Catalyzes the radical-mediated cleavage of tyrosine to 2-iminoacetate and 4-cresol; Belongs to the radical SAM superfamily. ThiH family; KEGG: nko:Niako_3572 2-iminoacetate synthase.


ensembl_gene_id: UJ101_02711
symbol: APD08209.1
gene_biotype: protein_coding
description:
  Putative membrane fusion protein SilB; Component of the sil cation efflux system that confers resistance to silver. May be part of a three-component cation/proton antiporter. Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: UJ101_02714
symbol: APD08212.1
gene_biotype: protein_coding
description:
  Cation efflux system protein CzcA; Has a low cation transport activity for cobalt, it is essential for the expression of cobalt, zinc, and cadmium resistance. CzcA and CzcB together would act in zinc efflux nearly as effectively as the complete CZC efflux system (CzcABC). Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: UJ101_02716
symbol: CPOX|hemF
gene_biotype: protein_coding
description:
  Coproporphyrinogen oxidase; Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX; Belongs to the aerobic coproporphyrinogen-III oxidase family; KEGG: fbc:FB2170_05175 coproporphyrinogen III oxidase.


ensembl_gene_id: UJ101_02720
symbol: CHO1|pssA
gene_biotype: protein_coding
description:
  CDP-diacylglycerol--serine O-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family; KEGG: tmb:Thimo_2349 CDP-diacylglycerol---serine O-phosphatidyltransferase.


ensembl_gene_id: UJ101_02721
symbol: APD08219.1
gene_biotype: protein_coding
description:
  Peptidylprolyl isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (By similarity); Belongs to the cyclophilin-type PPIase family; Contains 1 PPIase cyclophilin-type domain; KEGG: gfo:GFO_2538 peptidylprolyl isomerase.


ensembl_gene_id: UJ101_02722
symbol: PPIB|ppiB
gene_biotype: protein_coding
description:
  Peptidylprolyl isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (By similarity); Belongs to the cyclophilin-type PPIase family; Contains 1 PPIase cyclophilin-type domain; KEGG: ccl:Clocl_1087 peptidyl-prolyl cis-trans isomerase B (cyclophilin B).


ensembl_gene_id: UJ101_02725
symbol: ndk|NME
gene_biotype: protein_coding
description:
  Nucleoside-diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.


ensembl_gene_id: UJ101_02726
symbol: APD08224.1
gene_biotype: protein_coding
description:
  Dipeptidyl-peptidase; Involved in cell sporulation. Hydrolyzes gamma-D-Glu-L- (meso)A2pm linkages only in those peptide units that have a free N-terminal L-alanine. Belongs to the peptidase C40 family; KEGG: hhd:HBHAL_2055 peptidoglycan endopeptidase LytE; Acting on peptide bonds (peptidases).


