# geneInfo

ensembl_gene_id: SAMN05421842_101100
symbol: thiM
gene_biotype: protein_coding
description:
  Hydroxyethylthiazole kinase; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family.


ensembl_gene_id: SAMN05421842_101108
symbol: SFC16706.1
gene_biotype: protein_coding
description:
  Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E.


ensembl_gene_id: SAMN05421842_101120
symbol: ispH
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.


ensembl_gene_id: SAMN05421842_101122
symbol: miaB
gene_biotype: protein_coding
description:
  tRNA-2-methylthio-N6-dimethylallyladenosine synthase; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.


ensembl_gene_id: SAMN05421842_101123
symbol: SFC17214.1
gene_biotype: protein_coding
description:
  Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily.


ensembl_gene_id: SAMN05421842_101127
symbol: lexA
gene_biotype: protein_coding
description:
  Repressor LexA; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair.


ensembl_gene_id: SAMN05421842_101129
symbol: hfq
gene_biotype: protein_coding
description:
  Host factor-I protein; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family.


ensembl_gene_id: SAMN05421842_101130
symbol: miaA
gene_biotype: protein_coding
description:
  tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.


ensembl_gene_id: SAMN05421842_101131
symbol: mutL
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.


ensembl_gene_id: SAMN05421842_101133
symbol: mutS
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.


ensembl_gene_id: SAMN05421842_101135
symbol: panD
gene_biotype: protein_coding
description:
  L-aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.


ensembl_gene_id: SAMN05421842_101136
symbol: panC
gene_biotype: protein_coding
description:
  Pantoate--beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.


ensembl_gene_id: SAMN05421842_101137
symbol: panB
gene_biotype: protein_coding
description:
  3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family.


ensembl_gene_id: SAMN05421842_101154
symbol: SFC18173.1
gene_biotype: protein_coding
description:
  Peptide/nickel transport system ATP-binding protein/oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.


ensembl_gene_id: SAMN05421842_101170
symbol: SFC18662.1
gene_biotype: protein_coding
description:
  Putative phosphotransacetylase; Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate.


ensembl_gene_id: SAMN05421842_101177
symbol: trpA
gene_biotype: protein_coding
description:
  Tryptophan synthase, alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.


ensembl_gene_id: SAMN05421842_101178
symbol: trpB
gene_biotype: protein_coding
description:
  Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.


ensembl_gene_id: SAMN05421842_101181
symbol: trpD
gene_biotype: protein_coding
description:
  Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).


ensembl_gene_id: SAMN05421842_101183
symbol: trpE
gene_biotype: protein_coding
description:
  Anthranilate synthase component 1; Part of a heterotetrameric complex that catalyzes the two- step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine-binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentr [...]


ensembl_gene_id: SAMN05421842_101191
symbol: pdxT
gene_biotype: protein_coding
description:
  5'-phosphate synthase pdxT subunit; Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS.


ensembl_gene_id: SAMN05421842_101192
symbol: pdxS
gene_biotype: protein_coding
description:
  Pyridoxal 5'-phosphate synthase pdxS subunit; Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5- phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively. Belongs to the PdxS/SNZ family.


ensembl_gene_id: SAMN05421842_101204
symbol: SFC19783.1
gene_biotype: protein_coding
description:
  Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase.


ensembl_gene_id: SAMN05421842_101206
symbol: SFC19844.1
gene_biotype: protein_coding
description:
  GGDEF domain-containing protein, diguanylate cyclase (c-di-GMP synthetase) or its enzymatically inactive variants.


ensembl_gene_id: SAMN05421842_10121
symbol: queE
gene_biotype: protein_coding
description:
  7-carboxy-7-deazaguanine synthase; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds.


ensembl_gene_id: SAMN05421842_101227
symbol: SFC20512.1
gene_biotype: protein_coding
description:
  Type I restriction enzyme, R subunit; Subunit R is required for both nuclease and ATPase activities, but not for modification.


ensembl_gene_id: SAMN05421842_10123
symbol: queC
gene_biotype: protein_coding
description:
  7-cyano-7-deazaguanine synthase; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)).


ensembl_gene_id: SAMN05421842_101232
symbol: xpt
gene_biotype: protein_coding
description:
  Xanthine phosphoribosyltransferase; Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis.


ensembl_gene_id: SAMN05421842_101235
symbol: SFC20762.1
gene_biotype: protein_coding
description:
  Fructose-6-phosphate aldolase 2; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.


ensembl_gene_id: SAMN05421842_101238
symbol: SFC20876.1
gene_biotype: protein_coding
description:
  dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.


ensembl_gene_id: SAMN05421842_101256
symbol: topB
gene_biotype: protein_coding
description:
  DNA topoisomerase-3; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]


ensembl_gene_id: SAMN05421842_10126
symbol: SFC13850.1
gene_biotype: protein_coding
description:
  Nitrite/Sulfite reductase ferredoxin-like half domain-containing protein; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.


ensembl_gene_id: SAMN05421842_101266
symbol: SFC21839.1
gene_biotype: protein_coding
description:
  methylated-DNA-[protein]-cysteine S-methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated.


ensembl_gene_id: SAMN05421842_101268
symbol: katG
gene_biotype: protein_coding
description:
  Catalase-peroxidase; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily.


ensembl_gene_id: SAMN05421842_101285
symbol: SFC22495.1
gene_biotype: protein_coding
description:
  Polar amino acid transport system permease protein/polar amino acid transport system substrate-binding protein.


ensembl_gene_id: SAMN05421842_101297
symbol: queH
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr).


ensembl_gene_id: SAMN05421842_101307
symbol: scpB
gene_biotype: protein_coding
description:
  Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: SAMN05421842_101308
symbol: scpA
gene_biotype: protein_coding
description:
  Condensin subunit ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: SAMN05421842_101309
symbol: SFC23298.1
gene_biotype: protein_coding
description:
  D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family.


ensembl_gene_id: SAMN05421842_10173
symbol: azoR
gene_biotype: protein_coding
description:
  FMN-dependent NADH-azoreductase; Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family.


ensembl_gene_id: SAMN05421842_10182
symbol: SFC15853.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid:cation transporter, LIVCS family; Component of the transport system for branched-chain amino acids.


ensembl_gene_id: SAMN05421842_102102
symbol: SFC30523.1
gene_biotype: protein_coding
description:
  23S rRNA pseudouridine1911/1915/1917 synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: SAMN05421842_102105
symbol: nadD
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).


ensembl_gene_id: SAMN05421842_102107
symbol: obg
gene_biotype: protein_coding
description:
  GTP-binding protein; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.


ensembl_gene_id: SAMN05421842_102110
symbol: rplU
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.


ensembl_gene_id: SAMN05421842_102114
symbol: SFC30894.1
gene_biotype: protein_coding
description:
  PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein/HDIG domain-containing protein.


ensembl_gene_id: SAMN05421842_102115
symbol: SFC30935.1
gene_biotype: protein_coding
description:
  Two-component response regulator, YesN/AraC family, consists of REC and AraC-type DNA-binding domains.


ensembl_gene_id: SAMN05421842_102125
symbol: minE
gene_biotype: protein_coding
description:
  Cell division topological specificity factor; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell.


ensembl_gene_id: SAMN05421842_102127
symbol: minC
gene_biotype: protein_coding
description:
  Septum site-determining protein MinC; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family.


ensembl_gene_id: SAMN05421842_102133
symbol: SFC31478.1
gene_biotype: protein_coding
description:
  Septum formation protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.


ensembl_gene_id: SAMN05421842_102145
symbol: SFC31809.1
gene_biotype: protein_coding
description:
  Zinc transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family.


ensembl_gene_id: SAMN05421842_10215
symbol: metN
gene_biotype: protein_coding
description:
  D-methionine transport system ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.


ensembl_gene_id: SAMN05421842_102163
symbol: SFC32224.1
gene_biotype: protein_coding
description:
  Ribosomal-protein-alanine N-acetyltransferase; Acetylates the N-terminal alanine of ribosomal protein S18.


ensembl_gene_id: SAMN05421842_102164
symbol: SFC32244.1
gene_biotype: protein_coding
description:
  Riboflavin transporter FmnP; Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins; Belongs to the prokaryotic riboflavin transporter (P-RFT) (TC 2.A.87) family.


ensembl_gene_id: SAMN05421842_102172
symbol: prfB
gene_biotype: protein_coding
description:
  Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.


ensembl_gene_id: SAMN05421842_102173
symbol: secA
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family.


ensembl_gene_id: SAMN05421842_102174
symbol: hpf
gene_biotype: protein_coding
description:
  Putative sigma-54 modulation protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.


ensembl_gene_id: SAMN05421842_102177
symbol: recD2
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease V alpha subunit; DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity; Belongs to the RecD family. RecD-like subfamily.


ensembl_gene_id: SAMN05421842_102178
symbol: metK
gene_biotype: protein_coding
description:
  Methionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.


ensembl_gene_id: SAMN05421842_102193
symbol: murA
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.


ensembl_gene_id: SAMN05421842_102195
symbol: atpC
gene_biotype: protein_coding
description:
  F-type H+-transporting ATPase subunit epsilon; Produces ATP from ADP in the presence of a proton gradient across the membrane.


ensembl_gene_id: SAMN05421842_102196
symbol: atpD
gene_biotype: protein_coding
description:
  F-type H+-transporting ATPase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.


ensembl_gene_id: SAMN05421842_102197
symbol: atpG
gene_biotype: protein_coding
description:
  F-type H+-transporting ATPase subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.


ensembl_gene_id: SAMN05421842_102198
symbol: atpA
gene_biotype: protein_coding
description:
  F-type H+-transporting ATPase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.


ensembl_gene_id: SAMN05421842_102199
symbol: atpH
gene_biotype: protein_coding
description:
  F-type H+-transporting ATPase subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: SAMN05421842_102200
symbol: atpF
gene_biotype: protein_coding
description:
  F-type H+-transporting ATPase subunit b; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.


ensembl_gene_id: SAMN05421842_102201
symbol: atpE
gene_biotype: protein_coding
description:
  F-type H+-transporting ATPase subunit c; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: SAMN05421842_102202
symbol: atpB
gene_biotype: protein_coding
description:
  F-type H+-transporting ATPase subunit a; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.


ensembl_gene_id: SAMN05421842_102205
symbol: SFC33123.1
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing); Belongs to the UDP-N-acetylglucosamine 2-epimerase family.


ensembl_gene_id: SAMN05421842_102207
symbol: upp
gene_biotype: protein_coding
description:
  Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.


ensembl_gene_id: SAMN05421842_102209
symbol: SFC33233.1
gene_biotype: protein_coding
description:
  L-threonylcarbamoyladenylate synthase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.


ensembl_gene_id: SAMN05421842_102211
symbol: prfA
gene_biotype: protein_coding
description:
  Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.


ensembl_gene_id: SAMN05421842_102212
symbol: prmC
gene_biotype: protein_coding
description:
  protein-(glutamine-N5) methyltransferase, release factor-specific; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.


ensembl_gene_id: SAMN05421842_102216
symbol: rho
gene_biotype: protein_coding
description:
  Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.


ensembl_gene_id: SAMN05421842_102217
symbol: pyrG
gene_biotype: protein_coding
description:
  CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.


ensembl_gene_id: SAMN05421842_102222
symbol: ispE
gene_biotype: protein_coding
description:
  4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.


ensembl_gene_id: SAMN05421842_102240
symbol: tsaD
gene_biotype: protein_coding
description:
  N6-L-threonylcarbamoyladenine synthase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.


ensembl_gene_id: SAMN05421842_10225
symbol: deoC
gene_biotype: protein_coding
description:
  Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.


ensembl_gene_id: SAMN05421842_10239
symbol: mntH
gene_biotype: protein_coding
description:
  Manganese transport protein; H(+)-stimulated, divalent metal cation uptake system. Belongs to the NRAMP family.


ensembl_gene_id: SAMN05421842_1024
symbol: clpB
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease ATP-binding subunit ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.


ensembl_gene_id: SAMN05421842_10240
symbol: SFC28425.1
gene_biotype: protein_coding
description:
  Cation diffusion facilitator family transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.


ensembl_gene_id: SAMN05421842_10244
symbol: SFC28566.1
gene_biotype: protein_coding
description:
  MFS transporter, sugar porter (SP) family; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.


ensembl_gene_id: SAMN05421842_10288
symbol: SFC30056.1
gene_biotype: protein_coding
description:
  Anaerobic sulfite reductase subunit C; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.


ensembl_gene_id: SAMN05421842_10296
symbol: kup
gene_biotype: protein_coding
description:
  KUP system potassium uptake protein; Transport of potassium into the cell; Belongs to the HAK/KUP transporter (TC 2.A.72) family.


ensembl_gene_id: SAMN05421842_10297
symbol: SFC30360.1
gene_biotype: protein_coding
description:
  23S rRNA (uracil-5-)-methyltransferase RumA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.


ensembl_gene_id: SAMN05421842_103108
symbol: SFC40880.1
gene_biotype: protein_coding
description:
  Purine-nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.


ensembl_gene_id: SAMN05421842_103116
symbol: SFC41160.1
gene_biotype: protein_coding
description:
  RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: SAMN05421842_10312
symbol: SFC37471.1
gene_biotype: protein_coding
description:
  Alginate O-acetyltransferase complex protein AlgI; Belongs to the membrane-bound acyltransferase family.


ensembl_gene_id: SAMN05421842_103122
symbol: glmS
gene_biotype: protein_coding
description:
  Glucosamine--fructose-6-phosphate aminotransferase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.


ensembl_gene_id: SAMN05421842_103148
symbol: thrS
gene_biotype: protein_coding
description:
  threonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr).


ensembl_gene_id: SAMN05421842_103154
symbol: ispF
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP).


ensembl_gene_id: SAMN05421842_103162
symbol: SFC42633.1
gene_biotype: protein_coding
description:
  GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex.


ensembl_gene_id: SAMN05421842_103163
symbol: SFC42665.1
gene_biotype: protein_coding
description:
  Lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.


ensembl_gene_id: SAMN05421842_103175
symbol: mntP
gene_biotype: protein_coding
description:
  Putative Mn2+ efflux pump MntP; Probably functions as a manganese efflux pump. Belongs to the MntP (TC 9.B.29) family.


ensembl_gene_id: SAMN05421842_103176
symbol: rex
gene_biotype: protein_coding
description:
  Redox-sensing transcriptional repressor; Modulates transcription in response to changes in cellular NADH/NAD(+) redox state.


ensembl_gene_id: SAMN05421842_103190
symbol: groS
gene_biotype: protein_coding
description:
  Chaperonin GroES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.


ensembl_gene_id: SAMN05421842_103191
symbol: groL
gene_biotype: protein_coding
description:
  Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.


ensembl_gene_id: SAMN05421842_103194
symbol: guaB
gene_biotype: protein_coding
description:
  IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.


ensembl_gene_id: SAMN05421842_103203
symbol: SFC43909.1
gene_biotype: protein_coding
description:
  Sorbitol-6-phosphate 2-dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: SAMN05421842_103210
symbol: ligA
gene_biotype: protein_coding
description:
  DNA ligase (NAD+); DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA.


ensembl_gene_id: SAMN05421842_103216
symbol: rph
gene_biotype: protein_coding
description:
  Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation.


ensembl_gene_id: SAMN05421842_103217
symbol: SFC44457.1
gene_biotype: protein_coding
description:
  XTP/dITP diphosphohydrolase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.


ensembl_gene_id: SAMN05421842_1034
symbol: ribB
gene_biotype: protein_coding
description:
  3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate.


ensembl_gene_id: SAMN05421842_10349
symbol: SFC38710.1
gene_biotype: protein_coding
description:
  AI-2 transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: SAMN05421842_10364
symbol: SFC39242.1
gene_biotype: protein_coding
description:
  Molybdate transport system permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: SAMN05421842_10367
symbol: moaC
gene_biotype: protein_coding
description:
  Cyclic pyranopterin phosphate synthase; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family.


ensembl_gene_id: SAMN05421842_10368
symbol: moaA
gene_biotype: protein_coding
description:
  Cyclic pyranopterin phosphate synthase; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.


ensembl_gene_id: SAMN05421842_10369
symbol: SFC39415.1
gene_biotype: protein_coding
description:
  Molybdopterin molybdotransferase; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.


ensembl_gene_id: SAMN05421842_1041
symbol: SFC47172.1
gene_biotype: protein_coding
description:
  Thiol-activated cytolysin; Sulfhydryl-activated toxin that causes cytolysis by forming pores in cholesterol containing host membranes. After binding to target membranes, the protein undergoes a major conformation change, leading to its insertion in the host membrane and formation of an oligomeric pore complex; Belongs to the thiol-activated cytolysin family.


ensembl_gene_id: SAMN05421842_104105
symbol: SFC50114.1
gene_biotype: protein_coding
description:
  Polar amino acid transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: SAMN05421842_104112
symbol: hypA
gene_biotype: protein_coding
description:
  Hydrogenase nickel incorporation protein HypA/HybF; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.


ensembl_gene_id: SAMN05421842_104126
symbol: ftsH
gene_biotype: protein_coding
description:
  Cell division protease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family.  In the central section; belongs to the AAA ATPase family.


ensembl_gene_id: SAMN05421842_104171
symbol: SFC52037.1
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.


ensembl_gene_id: SAMN05421842_10418
symbol: trpB-2
gene_biotype: protein_coding
description:
  Tryptophan synthase beta chain/tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.


ensembl_gene_id: SAMN05421842_10421
symbol: rodA
gene_biotype: protein_coding
description:
  Rod shape determining protein RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.


ensembl_gene_id: SAMN05421842_10442
symbol: msrB
gene_biotype: protein_coding
description:
  Peptide methionine sulfoxide reductase msrA/msrB; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.


ensembl_gene_id: SAMN05421842_10452
symbol: SFC48473.1
gene_biotype: protein_coding
description:
  2,3-bisphosphoglycerate-dependent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.


ensembl_gene_id: SAMN05421842_10457
symbol: selO
gene_biotype: protein_coding
description:
  Uncharacterized conserved protein YdiU, UPF0061 family; Catalyzes the transfer of adenosine 5'-monophosphate (AMP) to Ser, Thr or Tyr residues of target proteins (AMPylation). Belongs to the SELO family.


ensembl_gene_id: SAMN05421842_10459
symbol: ade
gene_biotype: protein_coding
description:
  Adenine deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family.


ensembl_gene_id: SAMN05421842_10466
symbol: dbpA
gene_biotype: protein_coding
description:
  ATP-dependent RNA helicase DbpA; DEAD-box RNA helicase involved in the assembly of the 50S ribosomal subunit. Has an RNA-dependent ATPase activity, which is specific for 23S rRNA, and a 3' to 5' RNA helicase activity that uses the energy of ATP hydrolysis to destabilize and unwind short rRNA duplexes.


ensembl_gene_id: SAMN05421842_10495
symbol: SFC49792.1
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate dehydrogenase (NAD(P)+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: SAMN05421842_10496
symbol: SFC49827.1
gene_biotype: protein_coding
description:
  HAD-superfamily subfamily IIA hydrolase, TIGR01457; Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro; Belongs to the HAD-like hydrolase superfamily. NagD family.


ensembl_gene_id: SAMN05421842_105101
symbol: SFC56839.1
gene_biotype: protein_coding
description:
  Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.


ensembl_gene_id: SAMN05421842_105111
symbol: birA
gene_biotype: protein_coding
description:
  Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.


ensembl_gene_id: SAMN05421842_105113
symbol: ldh
gene_biotype: protein_coding
description:
  L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family.


ensembl_gene_id: SAMN05421842_105118
symbol: pyrE
gene_biotype: protein_coding
description:
  Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).


ensembl_gene_id: SAMN05421842_105119
symbol: pyrD
gene_biotype: protein_coding
description:
  Dihydroorotate dehydrogenase (NAD+) catalytic subunit; Catalyzes the conversion of dihydroorotate to orotate.


ensembl_gene_id: SAMN05421842_105120
symbol: pyrK
gene_biotype: protein_coding
description:
  Dihydroorotate dehydrogenase electron transfer subunit; Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD(+).


ensembl_gene_id: SAMN05421842_105122
symbol: pyrC
gene_biotype: protein_coding
description:
  Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.


ensembl_gene_id: SAMN05421842_105124
symbol: pyrB
gene_biotype: protein_coding
description:
  Aspartate carbamoyltransferase catalytic subunit; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.


ensembl_gene_id: SAMN05421842_105126
symbol: pfkA
gene_biotype: protein_coding
description:
  6-phosphofructokinase 1; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. Mixed-substrate PFK group III subfamily.


ensembl_gene_id: SAMN05421842_105127
symbol: uppP
gene_biotype: protein_coding
description:
  Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.


ensembl_gene_id: SAMN05421842_10513
symbol: mutS2
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS2; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.


ensembl_gene_id: SAMN05421842_1052
symbol: ychF
gene_biotype: protein_coding
description:
  Hypothetical protein; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.


ensembl_gene_id: SAMN05421842_10521
symbol: pheT
gene_biotype: protein_coding
description:
  phenylalanyl-tRNA synthetase beta chain; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.


ensembl_gene_id: SAMN05421842_10522
symbol: pheS
gene_biotype: protein_coding
description:
  phenylalanyl-tRNA synthetase alpha chain; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.


ensembl_gene_id: SAMN05421842_10524
symbol: SFC54654.1
gene_biotype: protein_coding
description:
  RNA methyltransferase, TrmH family; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: SAMN05421842_10527
symbol: rplT
gene_biotype: protein_coding
description:
  LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.


ensembl_gene_id: SAMN05421842_10529
symbol: infC
gene_biotype: protein_coding
description:
  Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.


ensembl_gene_id: SAMN05421842_10533
symbol: hslO
gene_biotype: protein_coding
description:
  Molecular chaperone Hsp33; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress.


ensembl_gene_id: SAMN05421842_10536
symbol: asd
gene_biotype: protein_coding
description:
  Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.


ensembl_gene_id: SAMN05421842_10537
symbol: dapA
gene_biotype: protein_coding
description:
  4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).


ensembl_gene_id: SAMN05421842_10538
symbol: dapB
gene_biotype: protein_coding
description:
  4-hydroxy-tetrahydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.


ensembl_gene_id: SAMN05421842_10546
symbol: dapH
gene_biotype: protein_coding
description:
  2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase; Catalyzes the transfer of an acetyl group from acetyl-CoA to tetrahydrodipicolinate.


ensembl_gene_id: SAMN05421842_10553
symbol: SFC55473.1
gene_biotype: protein_coding
description:
  Dihydrofolate synthase / folylpolyglutamate synthase; Belongs to the folylpolyglutamate synthase family.


ensembl_gene_id: SAMN05421842_10554
symbol: valS
gene_biotype: protein_coding
description:
  valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.


ensembl_gene_id: SAMN05421842_1058
symbol: murJ
gene_biotype: protein_coding
description:
  Putative peptidoglycan lipid II flippase; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.


ensembl_gene_id: SAMN05421842_1059
symbol: SFC54218.1
gene_biotype: protein_coding
description:
  N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase; Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid.


ensembl_gene_id: SAMN05421842_1061
symbol: murG
gene_biotype: protein_coding
description:
  Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.


ensembl_gene_id: SAMN05421842_10610
symbol: cheD
gene_biotype: protein_coding
description:
  Chemotaxis protein CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.


ensembl_gene_id: SAMN05421842_106107
symbol: ybeY
gene_biotype: protein_coding
description:
  Probable rRNA maturation factor; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.


ensembl_gene_id: SAMN05421842_106109
symbol: era
gene_biotype: protein_coding
description:
  GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.


ensembl_gene_id: SAMN05421842_10611
symbol: cheB
gene_biotype: protein_coding
description:
  Two-component system, chemotaxis family, response regulator CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.


ensembl_gene_id: SAMN05421842_106116
symbol: dnaG
gene_biotype: protein_coding
description:
  DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.


ensembl_gene_id: SAMN05421842_106117
symbol: sigA
gene_biotype: protein_coding
description:
  RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.


ensembl_gene_id: SAMN05421842_106147
symbol: kdpA
gene_biotype: protein_coding
description:
  K+-transporting ATPase ATPase A chain; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane.


ensembl_gene_id: SAMN05421842_106148
symbol: kdpB
gene_biotype: protein_coding
description:
  K+-transporting ATPase ATPase B chain; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system. Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IA subfamily.


ensembl_gene_id: SAMN05421842_106149
symbol: kdpC
gene_biotype: protein_coding
description:
  K+-transporting ATPase ATPase C chain; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP-binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB/KdpC/ATP ternary complex.


ensembl_gene_id: SAMN05421842_106160
symbol: SFC64484.1
gene_biotype: protein_coding
description:
  Starch phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.


ensembl_gene_id: SAMN05421842_10623
symbol: fliW
gene_biotype: protein_coding
description:
  Flagellar assembly factor FliW; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum.


ensembl_gene_id: SAMN05421842_10624
symbol: csrA
gene_biotype: protein_coding
description:
  Carbon storage regulator; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW.


ensembl_gene_id: SAMN05421842_10628
symbol: SFC60659.1
gene_biotype: protein_coding
description:
  Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.


ensembl_gene_id: SAMN05421842_10630
symbol: SFC60710.1
gene_biotype: protein_coding
description:
  Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.


ensembl_gene_id: SAMN05421842_10642
symbol: SFC61002.1
gene_biotype: protein_coding
description:
  Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.


ensembl_gene_id: SAMN05421842_10645
symbol: SFC61079.1
gene_biotype: protein_coding
description:
  Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.


ensembl_gene_id: SAMN05421842_10651
symbol: SFC61263.1
gene_biotype: protein_coding
description:
  Flagellar basal-body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein.


ensembl_gene_id: SAMN05421842_10657
symbol: SFC61425.1
gene_biotype: protein_coding
description:
  Flagellar FliL protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.


ensembl_gene_id: SAMN05421842_10659
symbol: fliP
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.


ensembl_gene_id: SAMN05421842_10660
symbol: fliQ
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.


ensembl_gene_id: SAMN05421842_10661
symbol: flhB
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliR/FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family.


ensembl_gene_id: SAMN05421842_10662
symbol: flhA
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.


ensembl_gene_id: SAMN05421842_10666
symbol: SFC61672.1
gene_biotype: protein_coding
description:
  RNA polymerase sigma factor for flagellar operon FliA; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: SAMN05421842_10675
symbol: thiC
gene_biotype: protein_coding
description:
  Phosphomethylpyrimidine synthase; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. Belongs to the ThiC family.


ensembl_gene_id: SAMN05421842_10678
symbol: SFC62008.1
gene_biotype: protein_coding
description:
  Stage II sporulation protein AA (anti-sigma F factor antagonist); Belongs to the anti-sigma-factor antagonist family.


ensembl_gene_id: SAMN05421842_10679
symbol: spoIIAB
gene_biotype: protein_coding
description:
  Stage II sporulation protein AB (anti-sigma F factor); Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition.


ensembl_gene_id: SAMN05421842_10680
symbol: SFC62071.1
gene_biotype: protein_coding
description:
  RNA polymerase sporulation-specific sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: SAMN05421842_10688
symbol: gpr
gene_biotype: protein_coding
description:
  Spore protease; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.


ensembl_gene_id: SAMN05421842_10691
symbol: lepA
gene_biotype: protein_coding
description:
  GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.


ensembl_gene_id: SAMN05421842_10692
symbol: SFC62442.1
gene_biotype: protein_coding
description:
  Oxygen-independent coproporphyrinogen-3 oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: SAMN05421842_10693
symbol: hrcA
gene_biotype: protein_coding
description:
  Heat-inducible transcriptional repressor; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons.


ensembl_gene_id: SAMN05421842_10694
symbol: grpE
gene_biotype: protein_coding
description:
  Molecular chaperone GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP [...]


ensembl_gene_id: SAMN05421842_10696
symbol: dnaJ
gene_biotype: protein_coding
description:
  Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...]


ensembl_gene_id: SAMN05421842_10697
symbol: trmB
gene_biotype: protein_coding
description:
  tRNA (guanine-N7-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.


ensembl_gene_id: SAMN05421842_10698
symbol: prmA
gene_biotype: protein_coding
description:
  Ribosomal protein L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family.


ensembl_gene_id: SAMN05421842_10699
symbol: SFC62680.1
gene_biotype: protein_coding
description:
  16S rRNA (uracil1498-N3)-methyltransferase; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.


ensembl_gene_id: SAMN05421842_107106
symbol: SFC68683.1
gene_biotype: protein_coding
description:
  Peptidyl-prolyl cis-trans isomerase B (cyclophilin B); PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.


ensembl_gene_id: SAMN05421842_10712
symbol: greA
gene_biotype: protein_coding
description:
  Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.


ensembl_gene_id: SAMN05421842_107120
symbol: proA
gene_biotype: protein_coding
description:
  Glutamate-5-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.


ensembl_gene_id: SAMN05421842_107121
symbol: proB
gene_biotype: protein_coding
description:
  Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.


ensembl_gene_id: SAMN05421842_107129
symbol: psd
gene_biotype: protein_coding
description:
  Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).


ensembl_gene_id: SAMN05421842_10713
symbol: SFC66575.1
gene_biotype: protein_coding
description:
  Putative TIM-barrel protein, nifR3 family; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.


ensembl_gene_id: SAMN05421842_107133
symbol: SFC69373.1
gene_biotype: protein_coding
description:
  Na+/H+-dicarboxylate symporter; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: SAMN05421842_107137
symbol: addB
gene_biotype: protein_coding
description:
  DNA helicase/exodeoxyribonuclease V, subunit B; ATP-dependent DNA helicase; Belongs to the helicase family. AddB/RexB type 1 subfamily.


ensembl_gene_id: SAMN05421842_10714
symbol: coaX
gene_biotype: protein_coding
description:
  Type III pantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.


ensembl_gene_id: SAMN05421842_107143
symbol: serS
gene_biotype: protein_coding
description:
  seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).


ensembl_gene_id: SAMN05421842_10717
symbol: SFC66685.1
gene_biotype: protein_coding
description:
  Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.


ensembl_gene_id: SAMN05421842_10718
symbol: tilS
gene_biotype: protein_coding
description:
  tRNA(Ile)-lysidine synthase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.


ensembl_gene_id: SAMN05421842_1072
symbol: murD
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.


ensembl_gene_id: SAMN05421842_1073
symbol: glyQS
gene_biotype: protein_coding
description:
  glycyl-tRNA synthetase; Catalyzes the attachment of glycine to tRNA(Gly). Belongs to the class-II aminoacyl-tRNA synthetase family.


ensembl_gene_id: SAMN05421842_10732
symbol: SFC66967.1
gene_biotype: protein_coding
description:
  DNA-binding protein HU-beta; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.


ensembl_gene_id: SAMN05421842_10737
symbol: mfd
gene_biotype: protein_coding
description:
  Transcription-repair coupling factor (superfamily II helicase); Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.


ensembl_gene_id: SAMN05421842_10738
symbol: pth
gene_biotype: protein_coding
description:
  peptidyl-tRNA hydrolase, PTH1 family; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.


ensembl_gene_id: SAMN05421842_10740
symbol: prs
gene_biotype: protein_coding
description:
  Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.


ensembl_gene_id: SAMN05421842_10741
symbol: glmU
gene_biotype: protein_coding
description:
  Glucosamine-1-phosphate N-acetyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain.


ensembl_gene_id: SAMN05421842_10754
symbol: SFC67517.1
gene_biotype: protein_coding
description:
  Anaerobic ribonucleoside-triphosphate reductase activating protein; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine.


ensembl_gene_id: SAMN05421842_10766
symbol: SFC67777.1
gene_biotype: protein_coding
description:
  Chromosome partitioning ATPase, Mrp family, contains Fe-S cluster; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.


ensembl_gene_id: SAMN05421842_10768
symbol: lgt
gene_biotype: protein_coding
description:
  Phosphatidylglycerol:prolipoprotein diacylglycerol transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.


ensembl_gene_id: SAMN05421842_10771
symbol: rsmA
gene_biotype: protein_coding
description:
  16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.


ensembl_gene_id: SAMN05421842_10772
symbol: rnmV
gene_biotype: protein_coding
description:
  Ribonuclease M5; Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step.


ensembl_gene_id: SAMN05421842_10775
symbol: metG
gene_biotype: protein_coding
description:
  methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.


ensembl_gene_id: SAMN05421842_10791
symbol: ileS
gene_biotype: protein_coding
description:
  Isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 2 subfamily.


ensembl_gene_id: SAMN05421842_108102
symbol: dxr
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose-5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family.


ensembl_gene_id: SAMN05421842_108104
symbol: ispG
gene_biotype: protein_coding
description:
  (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family.


ensembl_gene_id: SAMN05421842_108105
symbol: polC
gene_biotype: protein_coding
description:
  DNA polymerase-3 subunit alpha; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: SAMN05421842_108106
symbol: rimP
gene_biotype: protein_coding
description:
  Ribosome maturation factor RimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.


ensembl_gene_id: SAMN05421842_108107
symbol: nusA
gene_biotype: protein_coding
description:
  N utilization substance protein A; Participates in both transcription termination and antitermination.


ensembl_gene_id: SAMN05421842_10811
symbol: SFC71463.1
gene_biotype: protein_coding
description:
  Putative holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.


ensembl_gene_id: SAMN05421842_108110
symbol: infB
gene_biotype: protein_coding
description:
  Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.


ensembl_gene_id: SAMN05421842_108111
symbol: rbfA
gene_biotype: protein_coding
description:
  Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.


ensembl_gene_id: SAMN05421842_108113
symbol: truB
gene_biotype: protein_coding
description:
  tRNA pseudouridine55 synthase; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.


ensembl_gene_id: SAMN05421842_108115
symbol: rpsO
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.


ensembl_gene_id: SAMN05421842_108116
symbol: pnp
gene_biotype: protein_coding
description:
  Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.


ensembl_gene_id: SAMN05421842_108122
symbol: rimO
gene_biotype: protein_coding
description:
  Ribosomal protein S12 methylthiotransferase; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.


ensembl_gene_id: SAMN05421842_108123
symbol: SFC74153.1
gene_biotype: protein_coding
description:
  CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: SAMN05421842_108124
symbol: recA
gene_biotype: protein_coding
description:
  Recombination protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.


ensembl_gene_id: SAMN05421842_108133
symbol: SFC74394.1
gene_biotype: protein_coding
description:
  Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.


ensembl_gene_id: SAMN05421842_108135
symbol: ribBA
gene_biotype: protein_coding
description:
  3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.


ensembl_gene_id: SAMN05421842_108136
symbol: ribH
gene_biotype: protein_coding
description:
  6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.


ensembl_gene_id: SAMN05421842_10814
symbol: rnj
gene_biotype: protein_coding
description:
  Ribonuclease J; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay.


ensembl_gene_id: SAMN05421842_10816
symbol: mltG
gene_biotype: protein_coding
description:
  UPF0755 protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation.


ensembl_gene_id: SAMN05421842_10820
symbol: SFC71692.1
gene_biotype: protein_coding
description:
  RNA polymerase, sigma 27/28 subunit, RpsK/SigK; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: SAMN05421842_10822
symbol: SFC71741.1
gene_biotype: protein_coding
description:
  Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.


ensembl_gene_id: SAMN05421842_10823
symbol: ftsZ
gene_biotype: protein_coding
description:
  Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.


ensembl_gene_id: SAMN05421842_10824
symbol: SFC71787.1
gene_biotype: protein_coding
description:
  Stage II sporulation protein GA (sporulation sigma-E factor processing peptidase); Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family.


ensembl_gene_id: SAMN05421842_10825
symbol: SFC71810.1
gene_biotype: protein_coding
description:
  RNA polymerase, sigma 29 subunit, SigE; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: SAMN05421842_10826
symbol: SFC71836.1
gene_biotype: protein_coding
description:
  RNA polymerase, sigma subunit, RpsG/SigG; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: SAMN05421842_10828
symbol: nrdR
gene_biotype: protein_coding
description:
  Transcriptional repressor NrdR; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family.


ensembl_gene_id: SAMN05421842_1083
symbol: iscS
gene_biotype: protein_coding
description:
  Cysteine desulfurase; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily.


ensembl_gene_id: SAMN05421842_10833
symbol: SFC72004.1
gene_biotype: protein_coding
description:
  Phosphate transport system permease protein; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: SAMN05421842_10835
symbol: pstB
gene_biotype: protein_coding
description:
  Phosphate ABC transporter ATP-binding protein, PhoT family; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.


ensembl_gene_id: SAMN05421842_10838
symbol: der
gene_biotype: protein_coding
description:
  GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.


ensembl_gene_id: SAMN05421842_10840
symbol: SFC72163.1
gene_biotype: protein_coding
description:
  Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.


ensembl_gene_id: SAMN05421842_10848
symbol: rpoZ
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.


ensembl_gene_id: SAMN05421842_10849
symbol: SFC72353.1
gene_biotype: protein_coding
description:
  Phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.


ensembl_gene_id: SAMN05421842_1085
symbol: mnmA
gene_biotype: protein_coding
description:
  tRNA-specific 2-thiouridylase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.


ensembl_gene_id: SAMN05421842_10850
symbol: priA
gene_biotype: protein_coding
description:
  Replication restart DNA helicase PriA; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.


ensembl_gene_id: SAMN05421842_10851
symbol: def
gene_biotype: protein_coding
description:
  Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.


ensembl_gene_id: SAMN05421842_10852
symbol: fmt
gene_biotype: protein_coding
description:
  methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.


ensembl_gene_id: SAMN05421842_10854
symbol: SFC72478.1
gene_biotype: protein_coding
description:
  16S rRNA (cytosine967-C5)-methyltransferase; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.


ensembl_gene_id: SAMN05421842_10855
symbol: rlmN
gene_biotype: protein_coding
description:
  23S rRNA (adenine2503-C2)-methyltransferase; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family.


ensembl_gene_id: SAMN05421842_10858
symbol: rsgA
gene_biotype: protein_coding
description:
  Ribosome biogenesis GTPase; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.


ensembl_gene_id: SAMN05421842_10864
symbol: recG
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.


ensembl_gene_id: SAMN05421842_10866
symbol: coaD
gene_biotype: protein_coding
description:
  Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.


ensembl_gene_id: SAMN05421842_10869
symbol: tmcAL
gene_biotype: protein_coding
description:
  Predicted nucleotidyltransferase; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of elongator tRNA(Met), using acetate and ATP as substrates. First activates an acetate ion to form acetyladenylate (Ac- AMP) and then transfers the acetyl group to tRNA to form ac(4)C34.


ensembl_gene_id: SAMN05421842_10871
symbol: ackA
gene_biotype: protein_coding
description:
  Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.


ensembl_gene_id: SAMN05421842_10874
symbol: plsX
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate acyltransferase PlsX; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.


ensembl_gene_id: SAMN05421842_10876
symbol: rnc
gene_biotype: protein_coding
description:
  Ribonuclease-3; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.


ensembl_gene_id: SAMN05421842_10879
symbol: smc
gene_biotype: protein_coding
description:
  Condensin subunit Smc; Required for chromosome condensation and partitioning. Belongs to the SMC family.


ensembl_gene_id: SAMN05421842_10880
symbol: ftsY
gene_biotype: protein_coding
description:
  Fused signal recognition particle receptor; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC).


ensembl_gene_id: SAMN05421842_10881
symbol: SFC73156.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a regulatory protein.


ensembl_gene_id: SAMN05421842_10882
symbol: ffh
gene_biotype: protein_coding
description:
  Signal recognition particle subunit FFH/SRP54 (srp54); Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily.


ensembl_gene_id: SAMN05421842_10885
symbol: rimM
gene_biotype: protein_coding
description:
  16S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.


ensembl_gene_id: SAMN05421842_10886
symbol: trmD
gene_biotype: protein_coding
description:
  tRNA (guanine37-N1)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.


ensembl_gene_id: SAMN05421842_10887
symbol: rplS
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.


ensembl_gene_id: SAMN05421842_10888
symbol: SFC73330.1
gene_biotype: protein_coding
description:
  Ribosome biogenesis GTPase A; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.


ensembl_gene_id: SAMN05421842_1089
symbol: alaS
gene_biotype: protein_coding
description:
  alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.


ensembl_gene_id: SAMN05421842_10893
symbol: topA
gene_biotype: protein_coding
description:
  DNA topoisomerase-1; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]


ensembl_gene_id: SAMN05421842_10894
symbol: codY
gene_biotype: protein_coding
description:
  Transcriptional pleiotropic repressor; DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor; Belongs to the CodY family.


ensembl_gene_id: SAMN05421842_10896
symbol: tsf
gene_biotype: protein_coding
description:
  Elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.


ensembl_gene_id: SAMN05421842_10898
symbol: frr
gene_biotype: protein_coding
description:
  Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.


ensembl_gene_id: SAMN05421842_10899
symbol: SFC73587.1
gene_biotype: protein_coding
description:
  Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.


ensembl_gene_id: SAMN05421842_109100
symbol: atpF-2
gene_biotype: protein_coding
description:
  V/A-type H+-transporting ATPase subunit F; Produces ATP from ADP in the presence of a proton gradient across the membrane.


ensembl_gene_id: SAMN05421842_109101
symbol: atpA-2
gene_biotype: protein_coding
description:
  V/A-type H+-transporting ATPase subunit A; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.


ensembl_gene_id: SAMN05421842_109102
symbol: atpB-2
gene_biotype: protein_coding
description:
  V/A-type H+-transporting ATPase subunit B; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit.


ensembl_gene_id: SAMN05421842_109103
symbol: atpD-2
gene_biotype: protein_coding
description:
  V/A-type H+-transporting ATPase subunit D; Produces ATP from ADP in the presence of a proton gradient across the membrane.


ensembl_gene_id: SAMN05421842_109104
symbol: SFC78540.1
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase.


ensembl_gene_id: SAMN05421842_109106
symbol: luxS
gene_biotype: protein_coding
description:
  S-ribosylhomocysteine lyase; Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5-dihydroxy-2,3-pentadione (DPD). Belongs to the LuxS family.


ensembl_gene_id: SAMN05421842_10930
symbol: hemA
gene_biotype: protein_coding
description:
  glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).


ensembl_gene_id: SAMN05421842_10932
symbol: hemC
gene_biotype: protein_coding
description:
  Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.


ensembl_gene_id: SAMN05421842_10942
symbol: thrB
gene_biotype: protein_coding
description:
  Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily.


ensembl_gene_id: SAMN05421842_10950
symbol: hisZ
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase regulatory subunit; Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine.


ensembl_gene_id: SAMN05421842_10951
symbol: hisG
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Short subfamily.


ensembl_gene_id: SAMN05421842_10952
symbol: hisD
gene_biotype: protein_coding
description:
  Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.


ensembl_gene_id: SAMN05421842_10955
symbol: hisH
gene_biotype: protein_coding
description:
  Glutamine amidotransferase; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.


ensembl_gene_id: SAMN05421842_10957
symbol: hisF
gene_biotype: protein_coding
description:
  Cyclase; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.


ensembl_gene_id: SAMN05421842_10958
symbol: hisI
gene_biotype: protein_coding
description:
  phosphoribosyl-AMP cyclohydrolase; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP.


ensembl_gene_id: SAMN05421842_10963
symbol: tig
gene_biotype: protein_coding
description:
  Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.


ensembl_gene_id: SAMN05421842_10964
symbol: clpP
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease, protease subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: SAMN05421842_10965
symbol: clpX
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.


ensembl_gene_id: SAMN05421842_10967
symbol: lon
gene_biotype: protein_coding
description:
  ATP-dependent Lon protease; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.


ensembl_gene_id: SAMN05421842_10968
symbol: engB
gene_biotype: protein_coding
description:
  GTP-binding protein; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.


ensembl_gene_id: SAMN05421842_10973
symbol: SFC77689.1
gene_biotype: protein_coding
description:
  Fur family transcriptional regulator, peroxide stress response regulator; Belongs to the Fur family.


ensembl_gene_id: SAMN05421842_10976
symbol: SFC77775.1
gene_biotype: protein_coding
description:
  Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family.


ensembl_gene_id: SAMN05421842_10983
symbol: SFC77982.1
gene_biotype: protein_coding
description:
  23S rRNA pseudouridine955/2504/2580 synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: SAMN05421842_10998
symbol: atpE-2
gene_biotype: protein_coding
description:
  V/A-type H+-transporting ATPase subunit E; Produces ATP from ADP in the presence of a proton gradient across the membrane.


ensembl_gene_id: SAMN05421842_110102
symbol: dacA
gene_biotype: protein_coding
description:
  Diadenylate cyclase; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria.


ensembl_gene_id: SAMN05421842_110108
symbol: SFC83011.1
gene_biotype: protein_coding
description:
  Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives.


ensembl_gene_id: SAMN05421842_110109
symbol: SFC83040.1
gene_biotype: protein_coding
description:
  Dihydroneopterin aldolase / 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.


ensembl_gene_id: SAMN05421842_110112
symbol: glmM
gene_biotype: protein_coding
description:
  Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.


ensembl_gene_id: SAMN05421842_110116
symbol: leuC
gene_biotype: protein_coding
description:
  3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.


ensembl_gene_id: SAMN05421842_110117
symbol: leuD
gene_biotype: protein_coding
description:
  3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 2 subfamily.


ensembl_gene_id: SAMN05421842_110118
symbol: leuB
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.


ensembl_gene_id: SAMN05421842_11012
symbol: SFC80320.1
gene_biotype: protein_coding
description:
  4Fe-4S dicluster domain-containing protein; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.


ensembl_gene_id: SAMN05421842_110121
symbol: ilvC
gene_biotype: protein_coding
description:
  Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate.


ensembl_gene_id: SAMN05421842_11016
symbol: mcsB
gene_biotype: protein_coding
description:
  Protein arginine kinase; Catalyzes the specific phosphorylation of arginine residues in proteins; Belongs to the ATP:guanido phosphotransferase family.


ensembl_gene_id: SAMN05421842_11021
symbol: radA
gene_biotype: protein_coding
description:
  DNA repair protein RadA/Sms; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.


ensembl_gene_id: SAMN05421842_11022
symbol: disA
gene_biotype: protein_coding
description:
  Diadenylate cyclase; Has also diadenylate cyclase activity, catalyzing the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c-di-AMP acts as a signaling molecule that couples DNA integrity with progression of sporulation. The rise in c-di-AMP level generated by DisA while scanning the chromosome, operates as a positive signal that advances sporulation; upon encountering a lesion, the DisA focus arrests at the damaged site and halts c-di-AMP synthesis.


ensembl_gene_id: SAMN05421842_11025
symbol: ispD
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP).


ensembl_gene_id: SAMN05421842_11027
symbol: proS
gene_biotype: protein_coding
description:
  prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves dea [...]


ensembl_gene_id: SAMN05421842_11029
symbol: mrnC
gene_biotype: protein_coding
description:
  Ribonuclease-3 family protein; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family.


ensembl_gene_id: SAMN05421842_11030
symbol: SFC80764.1
gene_biotype: protein_coding
description:
  23S rRNA (guanosine2251-2'-O)-methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: SAMN05421842_11034
symbol: tuf
gene_biotype: protein_coding
description:
  Translation elongation factor 1A (EF-1A/EF-Tu); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.


ensembl_gene_id: SAMN05421842_11036
symbol: secE
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.


ensembl_gene_id: SAMN05421842_11037
symbol: nusG
gene_biotype: protein_coding
description:
  Transcription antitermination protein nusG; Participates in transcription elongation, termination and antitermination.


ensembl_gene_id: SAMN05421842_11038
symbol: rplK
gene_biotype: protein_coding
description:
  LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.


ensembl_gene_id: SAMN05421842_11039
symbol: rplA
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.


ensembl_gene_id: SAMN05421842_11041
symbol: rplJ
gene_biotype: protein_coding
description:
  LSU ribosomal protein L10P; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.


ensembl_gene_id: SAMN05421842_11042
symbol: rplL
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.


ensembl_gene_id: SAMN05421842_11043
symbol: rpoB
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: SAMN05421842_11045
symbol: rpsL
gene_biotype: protein_coding
description:
  SSU ribosomal protein S12P; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.


ensembl_gene_id: SAMN05421842_11046
symbol: rpsG
gene_biotype: protein_coding
description:
  SSU ribosomal protein S7P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.


ensembl_gene_id: SAMN05421842_11047
symbol: fusA
gene_biotype: protein_coding
description:
  Elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.


ensembl_gene_id: SAMN05421842_11049
symbol: rpsJ
gene_biotype: protein_coding
description:
  SSU ribosomal protein S10P; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.


ensembl_gene_id: SAMN05421842_11050
symbol: rplC
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.


ensembl_gene_id: SAMN05421842_11052
symbol: rplW
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.


ensembl_gene_id: SAMN05421842_11053
symbol: rplB
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.


ensembl_gene_id: SAMN05421842_11054
symbol: rpsS
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.


ensembl_gene_id: SAMN05421842_11055
symbol: rplV
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.


ensembl_gene_id: SAMN05421842_11056
symbol: rpsC
gene_biotype: protein_coding
description:
  SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.


ensembl_gene_id: SAMN05421842_11057
symbol: rplP
gene_biotype: protein_coding
description:
  LSU ribosomal protein L16P; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.


ensembl_gene_id: SAMN05421842_11059
symbol: rpsQ
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.


ensembl_gene_id: SAMN05421842_11060
symbol: rplN
gene_biotype: protein_coding
description:
  LSU ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.


ensembl_gene_id: SAMN05421842_11061
symbol: rplX
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.


ensembl_gene_id: SAMN05421842_11062
symbol: rplE
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.


ensembl_gene_id: SAMN05421842_11063
symbol: rpsZ
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.


ensembl_gene_id: SAMN05421842_11064
symbol: rpsH
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.


ensembl_gene_id: SAMN05421842_11065
symbol: rplF
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.


ensembl_gene_id: SAMN05421842_11066
symbol: rplR
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.


ensembl_gene_id: SAMN05421842_11067
symbol: rpsE
gene_biotype: protein_coding
description:
  SSU ribosomal protein S5P; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.


ensembl_gene_id: SAMN05421842_11069
symbol: rplO
gene_biotype: protein_coding
description:
  LSU ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.


ensembl_gene_id: SAMN05421842_11070
symbol: secY
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.


ensembl_gene_id: SAMN05421842_11071
symbol: adk
gene_biotype: protein_coding
description:
  Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.


ensembl_gene_id: SAMN05421842_11072
symbol: map
gene_biotype: protein_coding
description:
  Methionyl aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.


ensembl_gene_id: SAMN05421842_11074
symbol: infA
gene_biotype: protein_coding
description:
  Bacterial translation initiation factor 1 (bIF-1); One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.


ensembl_gene_id: SAMN05421842_11076
symbol: rpsM
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.


ensembl_gene_id: SAMN05421842_11077
symbol: rpsK
gene_biotype: protein_coding
description:
  SSU ribosomal protein S11P; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.


ensembl_gene_id: SAMN05421842_11078
symbol: rpsD
gene_biotype: protein_coding
description:
  SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.


ensembl_gene_id: SAMN05421842_11079
symbol: rpoA
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: SAMN05421842_11081
symbol: ecfA
gene_biotype: protein_coding
description:
  Energy-coupling factor transport system ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.


ensembl_gene_id: SAMN05421842_11083
symbol: ecfT
gene_biotype: protein_coding
description:
  Energy-coupling factor transport system permease protein; Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.


ensembl_gene_id: SAMN05421842_11084
symbol: truA
gene_biotype: protein_coding
description:
  tRNA pseudouridine38-40 synthase; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.


ensembl_gene_id: SAMN05421842_11085
symbol: rplM
gene_biotype: protein_coding
description:
  LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.


ensembl_gene_id: SAMN05421842_11095
symbol: SFC82634.1
gene_biotype: protein_coding
description:
  Phosphotransferase system, enzyme I, PtsI; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr).


ensembl_gene_id: SAMN05421842_11099
symbol: SFC82761.1
gene_biotype: protein_coding
description:
  Beta-aspartyl-dipeptidase (metallo-type); Catalyzes the hydrolytic cleavage of a subset of L- isoaspartyl (L-beta-aspartyl) dipeptides. Used to degrade proteins damaged by L-isoaspartyl residues formation. Belongs to the peptidase M38 family.


ensembl_gene_id: SAMN05421842_11111
symbol: prfC
gene_biotype: protein_coding
description:
  Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.


ensembl_gene_id: SAMN05421842_11140
symbol: SFC85770.1
gene_biotype: protein_coding
description:
  Beta-fructofuranosidase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.


ensembl_gene_id: SAMN05421842_11145
symbol: SFC85885.1
gene_biotype: protein_coding
description:
  NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC.


ensembl_gene_id: SAMN05421842_11156
symbol: trpS
gene_biotype: protein_coding
description:
  tryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: SAMN05421842_11164
symbol: tyrS
gene_biotype: protein_coding
description:
  tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily.


ensembl_gene_id: SAMN05421842_11173
symbol: SFC86565.1
gene_biotype: protein_coding
description:
  MFS transporter, SP family, arabinose:H+ symporter; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.


ensembl_gene_id: SAMN05421842_11178
symbol: SFC86649.1
gene_biotype: protein_coding
description:
  DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: SAMN05421842_11230
symbol: SFC88339.1
gene_biotype: protein_coding
description:
  dsDNA-specific endonuclease/ATPase MutS2; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity. Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.


ensembl_gene_id: SAMN05421842_1124
symbol: SFC87686.1
gene_biotype: protein_coding
description:
  Uncharacterized protein; Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E/beta-phosphoglucomutase family hydrolase.


ensembl_gene_id: SAMN05421842_11261
symbol: glyA
gene_biotype: protein_coding
description:
  Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.


ensembl_gene_id: SAMN05421842_11263
symbol: SFC89151.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: SAMN05421842_11271
symbol: nadE
gene_biotype: protein_coding
description:
  NAD+ synthase (glutamine-hydrolysing); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.


ensembl_gene_id: SAMN05421842_1128
symbol: phnW
gene_biotype: protein_coding
description:
  2-aminoethylphosphonate-pyruvate transaminase; Involved in phosphonate degradation; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily.


ensembl_gene_id: SAMN05421842_11282
symbol: purE
gene_biotype: protein_coding
description:
  5-(carboxyamino)imidazole ribonucleotide mutase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).


ensembl_gene_id: SAMN05421842_11284
symbol: purF
gene_biotype: protein_coding
description:
  Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.


ensembl_gene_id: SAMN05421842_11286
symbol: purN
gene_biotype: protein_coding
description:
  Phosphoribosylglycinamide formyltransferase-1; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.


ensembl_gene_id: SAMN05421842_1131
symbol: sigI
gene_biotype: protein_coding
description:
  RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; Belongs to the sigma-70 factor family. SigI subfamily.


ensembl_gene_id: SAMN05421842_11313
symbol: murQ
gene_biotype: protein_coding
description:
  N-acetylmuramic acid 6-phosphate etherase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate.


ensembl_gene_id: SAMN05421842_11319
symbol: SFC90722.1
gene_biotype: protein_coding
description:
  PTS system, cellobiose-specific IIC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.


ensembl_gene_id: SAMN05421842_11342
symbol: iolC
gene_biotype: protein_coding
description:
  5-dehydro-2-deoxygluconokinase; Catalyzes the phosphorylation of 5-dehydro-2-deoxy-D- gluconate (2-deoxy-5-keto-D-gluconate or DKG) to 6-phospho-5-dehydro-2- deoxy-D-gluconate (DKGP).


ensembl_gene_id: SAMN05421842_11344
symbol: iolD
gene_biotype: protein_coding
description:
  3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing); Involved in the cleavage of the C1-C2 bond of 3D-(3,5/4)- trihydroxycyclohexane-1,2-dione (THcHDO) to yield 5-deoxy-glucuronate (5DG).


ensembl_gene_id: SAMN05421842_11346
symbol: iolE
gene_biotype: protein_coding
description:
  Inosose dehydratase; Catalyzes the dehydration of inosose (2-keto-myo-inositol, 2KMI or 2,4,6/3,5-pentahydroxycyclohexanone) to 3D-(3,5/4)- trihydroxycyclohexane-1,2-dione (D-2,3-diketo-4-deoxy-epi-inositol).


ensembl_gene_id: SAMN05421842_11374
symbol: SFC92106.1
gene_biotype: protein_coding
description:
  glutamate:Na+ symporter, ESS family; Catalyzes the sodium-dependent transport of glutamate. Belongs to the glutamate:Na(+) symporter (ESS) (TC 2.A.27) family.


ensembl_gene_id: SAMN05421842_11376
symbol: SFC92153.1
gene_biotype: protein_coding
description:
  Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.


ensembl_gene_id: SAMN05421842_11381
symbol: SFC92286.1
gene_biotype: protein_coding
description:
  Tripeptide aminopeptidase; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family.


ensembl_gene_id: SAMN05421842_1141
symbol: SFC93060.1
gene_biotype: protein_coding
description:
  Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.


ensembl_gene_id: SAMN05421842_11416
symbol: gltX
gene_biotype: protein_coding
description:
  glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.


ensembl_gene_id: SAMN05421842_11439
symbol: cutC
gene_biotype: protein_coding
description:
  Copper homeostasis protein; Participates in the control of copper homeostasis. Belongs to the CutC family.


ensembl_gene_id: SAMN05421842_11451
symbol: SFC94233.1
gene_biotype: protein_coding
description:
  CDP-diacylglycerol---serine O-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: SAMN05421842_11460
symbol: nth
gene_biotype: protein_coding
description:
  Endonuclease-3; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.


ensembl_gene_id: SAMN05421842_11466
symbol: SFC94553.1
gene_biotype: protein_coding
description:
  tRNA (cytidine/uridine-2'-O-)-methyltransferase; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.


ensembl_gene_id: SAMN05421842_1147
symbol: thiE
gene_biotype: protein_coding
description:
  Thiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.


ensembl_gene_id: SAMN05421842_11470
symbol: SFC94643.1
gene_biotype: protein_coding
description:
  Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: SAMN05421842_11472
symbol: tpiA
gene_biotype: protein_coding
description:
  Triosephosphate isomerase (TIM); Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.


ensembl_gene_id: SAMN05421842_11473
symbol: gpmI
gene_biotype: protein_coding
description:
  2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.


ensembl_gene_id: SAMN05421842_11475
symbol: eno
gene_biotype: protein_coding
description:
  Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.


ensembl_gene_id: SAMN05421842_11476
symbol: SFC94767.1
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.


ensembl_gene_id: SAMN05421842_11477
symbol: hppA
gene_biotype: protein_coding
description:
  K(+)-stimulated pyrophosphate-energized sodium pump; Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na(+) movement across the membrane. Belongs to the H(+)-translocating pyrophosphatase (TC 3.A.10) family. K(+)-stimulated subfamily.


ensembl_gene_id: SAMN05421842_11478
symbol: rnr
gene_biotype: protein_coding
description:
  Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.


ensembl_gene_id: SAMN05421842_11479
symbol: smpB
gene_biotype: protein_coding
description:
  SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...]


ensembl_gene_id: SAMN05421842_1149
symbol: bioB
gene_biotype: protein_coding
description:
  Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.


ensembl_gene_id: SAMN05421842_11510
symbol: murF
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.


ensembl_gene_id: SAMN05421842_11511
symbol: mraY
gene_biotype: protein_coding
description:
  phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.


ensembl_gene_id: SAMN05421842_11517
symbol: SFC96061.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.


ensembl_gene_id: SAMN05421842_11518
symbol: sepF
gene_biotype: protein_coding
description:
  Cell division inhibitor SepF; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA.


ensembl_gene_id: SAMN05421842_11523
symbol: pyrR
gene_biotype: protein_coding
description:
  Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant; Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrR subfamily.


ensembl_gene_id: SAMN05421842_11525
symbol: SFC96254.1
gene_biotype: protein_coding
description:
  Predicted component of the ribosome quality control (RQC) complex, YloA/Tae2 family, contains fibronectin-binding (FbpA) and DUF814 domains.


ensembl_gene_id: SAMN05421842_11526
symbol: dapF
gene_biotype: protein_coding
description:
  Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.


ensembl_gene_id: SAMN05421842_11537
symbol: efp
gene_biotype: protein_coding
description:
  Elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.


ensembl_gene_id: SAMN05421842_11548
symbol: nusB
gene_biotype: protein_coding
description:
  N utilization substance protein B; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.


ensembl_gene_id: SAMN05421842_11549
symbol: folD
gene_biotype: protein_coding
description:
  Methylenetetrahydrofolate dehydrogenase (NADP+); Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.


ensembl_gene_id: SAMN05421842_11550
symbol: xseA
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.


ensembl_gene_id: SAMN05421842_11551
symbol: xseB
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.


ensembl_gene_id: SAMN05421842_11553
symbol: dxs
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.


ensembl_gene_id: SAMN05421842_11555
symbol: nadK
gene_biotype: protein_coding
description:
  NAD+ kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.


ensembl_gene_id: SAMN05421842_11557
symbol: SFC97034.1
gene_biotype: protein_coding
description:
  DNA repair protein RecN (Recombination protein N); May be involved in recombinational repair of damaged DNA.


ensembl_gene_id: SAMN05421842_11559
symbol: SFC97082.1
gene_biotype: protein_coding
description:
  Two-component system, response regulator, stage 0 sporulation protein A; May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process.


ensembl_gene_id: SAMN05421842_1156
symbol: rsmH
gene_biotype: protein_coding
description:
  16S rRNA (cytosine1402-N4)-methyltransferase; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.


ensembl_gene_id: SAMN05421842_11583
symbol: SFC97666.1
gene_biotype: protein_coding
description:
  Cystine transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: SAMN05421842_11586
symbol: corA
gene_biotype: protein_coding
description:
  Magnesium transporter; Mediates influx of magnesium ions. Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.


ensembl_gene_id: SAMN05421842_1159
symbol: murE
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily.


ensembl_gene_id: SAMN05421842_11626
symbol: nhaA
gene_biotype: protein_coding
description:
  Na+:H+ antiporter, NhaA family; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family.


ensembl_gene_id: SAMN05421842_11651
symbol: dinB
gene_biotype: protein_coding
description:
  DNA polymerase-4; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.


ensembl_gene_id: SAMN05421842_11673
symbol: SFD00539.1
gene_biotype: protein_coding
description:
  Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: SAMN05421842_11675
symbol: SFD00592.1
gene_biotype: protein_coding
description:
  Simple sugar transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: SAMN05421842_11723
symbol: cbiD
gene_biotype: protein_coding
description:
  cobalt-precorrin-5B (C1)-methyltransferase; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A.


ensembl_gene_id: SAMN05421842_11726
symbol: SFD02040.1
gene_biotype: protein_coding
description:
  Precorrin-2/cobalt-factor-2 C20-methyltransferase; Methylates cobalt-precorrin-2 at the C-20 position to produce cobalt-precorrin-3A in the anaerobic cobalamin biosynthesis pathway.


ensembl_gene_id: SAMN05421842_11727
symbol: SFD02058.1
gene_biotype: protein_coding
description:
  Precorrin-4/cobalt-precorrin-4 C11-methyltransferase; Belongs to the precorrin methyltransferase family.


ensembl_gene_id: SAMN05421842_11734
symbol: cobT
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB).


ensembl_gene_id: SAMN05421842_11739
symbol: SFD02292.1
gene_biotype: protein_coding
description:
  solute:Na+ symporter, SSS family; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.


ensembl_gene_id: SAMN05421842_11749
symbol: cobS
gene_biotype: protein_coding
description:
  adenosylcobinamide-GDP ribazoletransferase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.


ensembl_gene_id: SAMN05421842_1175
symbol: SFD01658.1
gene_biotype: protein_coding
description:
  Haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E.


ensembl_gene_id: SAMN05421842_11752
symbol: cobD
gene_biotype: protein_coding
description:
  Adenosylcobinamide-phosphate synthase; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.


ensembl_gene_id: SAMN05421842_11755
symbol: cobQ
gene_biotype: protein_coding
description:
  Adenosylcobyric acid synthase; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.


ensembl_gene_id: SAMN05421842_11760
symbol: metAA
gene_biotype: protein_coding
description:
  Homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family.


ensembl_gene_id: SAMN05421842_11763
symbol: SFD02774.1
gene_biotype: protein_coding
description:
  Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.


ensembl_gene_id: SAMN05421842_11829
symbol: SFD05581.1
gene_biotype: protein_coding
description:
  D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: SAMN05421842_11831
symbol: SFD05635.1
gene_biotype: protein_coding
description:
  Carboxypeptidase Taq; Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues.


ensembl_gene_id: SAMN05421842_11838
symbol: recR
gene_biotype: protein_coding
description:
  DNA replication and repair protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.


ensembl_gene_id: SAMN05421842_11839
symbol: SFD05852.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.


ensembl_gene_id: SAMN05421842_11840
symbol: dnaX
gene_biotype: protein_coding
description:
  DNA polymerase-3 subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: SAMN05421842_11841
symbol: thyA
gene_biotype: protein_coding
description:
  Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis.


ensembl_gene_id: SAMN05421842_11842
symbol: SFD05946.1
gene_biotype: protein_coding
description:
  Dihydrofolate reductase; Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis.


ensembl_gene_id: SAMN05421842_11847
symbol: tadA
gene_biotype: protein_coding
description:
  tRNA(adenine34) deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: SAMN05421842_11857
symbol: SFD06347.1
gene_biotype: protein_coding
description:
  1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.


ensembl_gene_id: SAMN05421842_1188
symbol: SFD04999.1
gene_biotype: protein_coding
description:
  Adenosylhomocysteine nucleosidase; Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'- methylthioribose and S-ribosylhomocysteine, respectively. Belongs to the PNP/UDP phosphorylase family. MtnN subfamily.


ensembl_gene_id: SAMN05421842_11926
symbol: lysA
gene_biotype: protein_coding
description:
  Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.


ensembl_gene_id: SAMN05421842_11951
symbol: SFD09384.1
gene_biotype: protein_coding
description:
  Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: SAMN05421842_12013
symbol: potA
gene_biotype: protein_coding
description:
  Spermidine/putrescine transport system ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.


ensembl_gene_id: SAMN05421842_12020
symbol: hflX
gene_biotype: protein_coding
description:
  GTP-binding protein HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis.


ensembl_gene_id: SAMN05421842_12039
symbol: speD
gene_biotype: protein_coding
description:
  S-adenosylmethionine decarboxylase; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the prokaryotic AdoMetDC family. Type 2 subfamily.


ensembl_gene_id: SAMN05421842_12041
symbol: speE
gene_biotype: protein_coding
description:
  Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine; Belongs to the spermidine/spermine synthase family.


ensembl_gene_id: SAMN05421842_12048
symbol: ruvA
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.


ensembl_gene_id: SAMN05421842_12049
symbol: ruvB
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase subunit RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.


ensembl_gene_id: SAMN05421842_12050
symbol: queA
gene_biotype: protein_coding
description:
  S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).


ensembl_gene_id: SAMN05421842_12051
symbol: tgt
gene_biotype: protein_coding
description:
  Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form t [...]


ensembl_gene_id: SAMN05421842_12054
symbol: secD
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecD/SecD/SecF fusion protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: SAMN05421842_12055
symbol: secF
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecF/SecD/SecF fusion protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: SAMN05421842_12057
symbol: apt
gene_biotype: protein_coding
description:
  Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.


ensembl_gene_id: SAMN05421842_12058
symbol: SFD11999.1
gene_biotype: protein_coding
description:
  GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.


ensembl_gene_id: SAMN05421842_12059
symbol: dtd
gene_biotype: protein_coding
description:
  D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family.


ensembl_gene_id: SAMN05421842_12063
symbol: aspS
gene_biotype: protein_coding
description:
  aspartyl-tRNA synthetase; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor end of tRNA(Asp). Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.


ensembl_gene_id: SAMN05421842_12118
symbol: SFD13714.1
gene_biotype: protein_coding
description:
  Quinolinate synthase; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.


ensembl_gene_id: SAMN05421842_12148
symbol: sbcD
gene_biotype: protein_coding
description:
  Exonuclease SbcD; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family.


ensembl_gene_id: SAMN05421842_12212
symbol: argC
gene_biotype: protein_coding
description:
  N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.


ensembl_gene_id: SAMN05421842_12213
symbol: argJ
gene_biotype: protein_coding
description:
  Glutamate N-acetyltransferase / amino-acid N-acetyltransferase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family.


ensembl_gene_id: SAMN05421842_12214
symbol: argB
gene_biotype: protein_coding
description:
  Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.


ensembl_gene_id: SAMN05421842_12215
symbol: argD
gene_biotype: protein_coding
description:
  acetylornithine/N-succinyldiaminopimelate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.


ensembl_gene_id: SAMN05421842_12228
symbol: nagB
gene_biotype: protein_coding
description:
  Glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion.


ensembl_gene_id: SAMN05421842_12233
symbol: aroQ
gene_biotype: protein_coding
description:
  3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.


ensembl_gene_id: SAMN05421842_12234
symbol: aroK
gene_biotype: protein_coding
description:
  Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.


ensembl_gene_id: SAMN05421842_12235
symbol: aroE
gene_biotype: protein_coding
description:
  Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).


ensembl_gene_id: SAMN05421842_12237
symbol: aroC
gene_biotype: protein_coding
description:
  Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.


ensembl_gene_id: SAMN05421842_12238
symbol: aroA
gene_biotype: protein_coding
description:
  3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.


ensembl_gene_id: SAMN05421842_12239
symbol: aroB
gene_biotype: protein_coding
description:
  3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).


ensembl_gene_id: SAMN05421842_12241
symbol: SFD15625.1
gene_biotype: protein_coding
description:
  Cardiolipin synthase; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol.


ensembl_gene_id: SAMN05421842_12313
symbol: SFD16592.1
gene_biotype: protein_coding
description:
  Uridine phosphorylase; Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the PNP/UDP phosphorylase family.


ensembl_gene_id: SAMN05421842_12315
symbol: deoB
gene_biotype: protein_coding
description:
  Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family.


ensembl_gene_id: SAMN05421842_12317
symbol: SFD16681.1
gene_biotype: protein_coding
description:
  Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.


ensembl_gene_id: SAMN05421842_12410
symbol: rnpA
gene_biotype: protein_coding
description:
  Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.


ensembl_gene_id: SAMN05421842_12411
symbol: SFD18925.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.


ensembl_gene_id: SAMN05421842_12414
symbol: mnmE
gene_biotype: protein_coding
description:
  tRNA modification GTPase; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.


ensembl_gene_id: SAMN05421842_12415
symbol: mnmG
gene_biotype: protein_coding
description:
  tRNA uridine 5-carboxymethylaminomethyl modification enzyme; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.


ensembl_gene_id: SAMN05421842_12416
symbol: rsmG
gene_biotype: protein_coding
description:
  16S rRNA (guanine527-N7)-methyltransferase; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.


ensembl_gene_id: SAMN05421842_1242
symbol: gyrA
gene_biotype: protein_coding
description:
  DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: SAMN05421842_12429
symbol: rpsR
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.


ensembl_gene_id: SAMN05421842_1243
symbol: gyrB
gene_biotype: protein_coding
description:
  DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: SAMN05421842_12431
symbol: SFD19463.1
gene_biotype: protein_coding
description:
  c-di-AMP phosphodiesterase, consists of a GGDEF-like and DHH domains; Has phosphodiesterase (PDE) activity against cyclic-di-AMP (c-di-AMP); Belongs to the GdpP/PdeA phosphodiesterase family.


ensembl_gene_id: SAMN05421842_12434
symbol: SFD19555.1
gene_biotype: protein_coding
description:
  Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.


ensembl_gene_id: SAMN05421842_12436
symbol: proC
gene_biotype: protein_coding
description:
  Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.


ensembl_gene_id: SAMN05421842_12438
symbol: purA
gene_biotype: protein_coding
description:
  Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.


ensembl_gene_id: SAMN05421842_1245
symbol: recF
gene_biotype: protein_coding
description:
  DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family.


ensembl_gene_id: SAMN05421842_12462
symbol: rlmH
gene_biotype: protein_coding
description:
  23S rRNA (pseudouridine1915-N3)-methyltransferase; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.


ensembl_gene_id: SAMN05421842_1247
symbol: SFD18789.1
gene_biotype: protein_coding
description:
  DNA polymerase-3 subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...]


ensembl_gene_id: SAMN05421842_1248
symbol: dnaA
gene_biotype: protein_coding
description:
  Chromosomal replication initiator protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.


ensembl_gene_id: SAMN05421842_12516
symbol: SFD21627.1
gene_biotype: protein_coding
description:
  Glycerol-1-phosphate dehydrogenase [NAD(P)+]; Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro; Belongs to the HAD-like hydrolase superfamily. NagD family.


ensembl_gene_id: SAMN05421842_12520
symbol: ftsE
gene_biotype: protein_coding
description:
  Cell division transport system ATP-binding protein; Part of the ABC transporter FtsEX involved in cellular division.


ensembl_gene_id: SAMN05421842_12521
symbol: SFD21779.1
gene_biotype: protein_coding
description:
  Cell division transport system permease protein; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.


ensembl_gene_id: SAMN05421842_12524
symbol: uvrB
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate  [...]


ensembl_gene_id: SAMN05421842_12525
symbol: uvrA
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.


ensembl_gene_id: SAMN05421842_12529
symbol: uvrC
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.


ensembl_gene_id: SAMN05421842_12532
symbol: SFD22087.1
gene_biotype: protein_coding
description:
  Conserved hypothetical protein, cofD-related; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family.


ensembl_gene_id: SAMN05421842_12536
symbol: pfkA-2
gene_biotype: protein_coding
description:
  6-phosphofructokinase 1; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.


ensembl_gene_id: SAMN05421842_12539
symbol: SFD22307.1
gene_biotype: protein_coding
description:
  23S rRNA (uracil1939-C5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.


ensembl_gene_id: SAMN05421842_1254
symbol: acpS
gene_biotype: protein_coding
description:
  Holo-[acyl-carrier protein] synthase; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family.


ensembl_gene_id: SAMN05421842_1255
symbol: nnrD
gene_biotype: protein_coding
description:
  NAD(P)H-hydrate epimerase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration.  Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of bot [...]


ensembl_gene_id: SAMN05421842_12819
symbol: SFD26574.1
gene_biotype: protein_coding
description:
  UDP-N-acetyl-D-glucosamine dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.


ensembl_gene_id: SAMN05421842_12820
symbol: SFD26590.1
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing)/UDP-GlcNAc3NAcA epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.


ensembl_gene_id: SAMN05421842_12910
symbol: SFD27704.1
gene_biotype: protein_coding
description:
  2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.


ensembl_gene_id: SAMN05421842_12917
symbol: kptA
gene_biotype: protein_coding
description:
  Putative RNA 2'-phosphotransferase; Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''- cyclic phosphate (APPR>P). May function as an ADP-ribosylase.


ensembl_gene_id: SAMN05421842_12937
symbol: SFD28295.1
gene_biotype: protein_coding
description:
  Methyltransferase, TIGR00027 family; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity.


ensembl_gene_id: SAMN05421842_13014
symbol: gshAB
gene_biotype: protein_coding
description:
  Glutamate--cysteine ligase; Synthesizes glutathione from L-glutamate and L-cysteine via gamma-L-glutamyl-L-cysteine; In the N-terminal section; belongs to the glutamate--cysteine ligase type 1 family. Type 2 subfamily.


ensembl_gene_id: SAMN05421842_13037
symbol: SFD29945.1
gene_biotype: protein_coding
description:
  Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.


ensembl_gene_id: SAMN05421842_1314
symbol: SFD30499.1
gene_biotype: protein_coding
description:
  Knotted carbamoyltransferase YgeW; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.


ensembl_gene_id: SAMN05421842_13310
symbol: dut
gene_biotype: protein_coding
description:
  dUTP pyrophosphatase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family.


ensembl_gene_id: SAMN05421842_13316
symbol: pfp
gene_biotype: protein_coding
description:
  6-phosphofructokinase 1; Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP- PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions.


ensembl_gene_id: SAMN05421842_13423
symbol: SFD34337.1
gene_biotype: protein_coding
description:
  Uncharacterized protein, PH0010 family/AmmeMemoRadiSam system protein A/AmmeMemoRadiSam system protein B.


ensembl_gene_id: SAMN05421842_13426
symbol: mprF
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms.


ensembl_gene_id: SAMN05421842_1346
symbol: SFD33873.1
gene_biotype: protein_coding
description:
  Cobalt/nickel transport system ATP-binding protein; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.


ensembl_gene_id: SAMN05421842_1348
symbol: cbiM
gene_biotype: protein_coding
description:
  Cobalt/nickel transport system permease protein; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import.


ensembl_gene_id: SAMN05421842_1349
symbol: cbiN
gene_biotype: protein_coding
description:
  Cobalt/nickel transport protein; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import; Belongs to the CbiN family.


ensembl_gene_id: SAMN05421842_1352
symbol: glpK
gene_biotype: protein_coding
description:
  Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.


ensembl_gene_id: SAMN05421842_13522
symbol: rnz
gene_biotype: protein_coding
description:
  Ribonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family.


ensembl_gene_id: SAMN05421842_1379
symbol: SFD36375.1
gene_biotype: protein_coding
description:
  tRNA-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.


ensembl_gene_id: SAMN05421842_13816
symbol: hprK
gene_biotype: protein_coding
description:
  HPr kinase/phosphorylase; Catalyzes the ATP- as well as the pyrophosphate-dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK/P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P-Ser-HPr). The two antagonistic activities of HprK/P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon [...]


ensembl_gene_id: SAMN05421842_1389
symbol: rbsK
gene_biotype: protein_coding
description:
  Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.


ensembl_gene_id: SAMN05421842_13910
symbol: coaE
gene_biotype: protein_coding
description:
  dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.


ensembl_gene_id: SAMN05421842_13911
symbol: polA
gene_biotype: protein_coding
description:
  DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.


ensembl_gene_id: SAMN05421842_13914
symbol: SFD38287.1
gene_biotype: protein_coding
description:
  Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.


ensembl_gene_id: SAMN05421842_13915
symbol: tyrS-2
gene_biotype: protein_coding
description:
  tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 2 subfamily.


ensembl_gene_id: SAMN05421842_1403
symbol: SFD38735.1
gene_biotype: protein_coding
description:
  Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins; Belongs to the polypeptide deformylase family.


ensembl_gene_id: SAMN05421842_14110
symbol: accD
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase carboxyl transferase subunit beta; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.


ensembl_gene_id: SAMN05421842_14111
symbol: SFD39859.1
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase, biotin carboxylase subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: SAMN05421842_14112
symbol: fabZ
gene_biotype: protein_coding
description:
  3-hydroxyacyl-[acyl-carrier-protein] dehydratase; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.


ensembl_gene_id: SAMN05421842_14113
symbol: SFD39899.1
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: SAMN05421842_14114
symbol: SFD39918.1
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.


ensembl_gene_id: SAMN05421842_14115
symbol: SFD39938.1
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: SAMN05421842_14118
symbol: acpP-2
gene_biotype: protein_coding
description:
  Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.


ensembl_gene_id: SAMN05421842_14119
symbol: fabH
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] synthase-3; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.


ensembl_gene_id: SAMN05421842_1415
symbol: SFD39733.1
gene_biotype: protein_coding
description:
  Putative ABC transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: SAMN05421842_1419
symbol: accA
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase carboxyl transferase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.


ensembl_gene_id: SAMN05421842_1428
symbol: nanE
gene_biotype: protein_coding
description:
  N-acylglucosamine-6-phosphate 2-epimerase; Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N- acetylglucosamine-6-phosphate (GlcNAc-6-P).


ensembl_gene_id: SAMN05421842_1435
symbol: leuA
gene_biotype: protein_coding
description:
  2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 2 subfamily.


ensembl_gene_id: SAMN05421842_14415
symbol: SFD41661.1
gene_biotype: protein_coding
description:
  Proton glutamate symport protein; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: SAMN05421842_1449
symbol: dbpA-2
gene_biotype: protein_coding
description:
  Superfamily II DNA and RNA helicase; DEAD-box RNA helicase involved in the assembly of the 50S ribosomal subunit. Has an RNA-dependent ATPase activity, which is specific for 23S rRNA, and a 3' to 5' RNA helicase activity that uses the energy of ATP hydrolysis to destabilize and unwind short rRNA duplexes.


ensembl_gene_id: SAMN05421842_1474
symbol: adc
gene_biotype: protein_coding
description:
  Acetoacetate decarboxylase; Catalyzes the conversion of acetoacetate to acetone and carbon dioxide; Belongs to the ADC family.


ensembl_gene_id: SAMN05421842_14810
symbol: cobB
gene_biotype: protein_coding
description:
  NAD-dependent deacetylase; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class U subfamily.


ensembl_gene_id: SAMN05421842_1485
symbol: ung
gene_biotype: protein_coding
description:
  uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.


ensembl_gene_id: SAMN05421842_14910
symbol: SFD44144.1
gene_biotype: protein_coding
description:
  Membrane protein involved in D-alanine export; Could be involved in the transport of activated D-alanine through the membrane.


ensembl_gene_id: SAMN05421842_14911
symbol: dltC
gene_biotype: protein_coding
description:
  D-alanine--poly(phosphoribitol) ligase subunit 2; Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC- carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall.


ensembl_gene_id: SAMN05421842_1492
symbol: rsmI
gene_biotype: protein_coding
description:
  16S rRNA (cytidine1402-2'-O)-methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.


ensembl_gene_id: SAMN05421842_1499
symbol: dltA
gene_biotype: protein_coding
description:
  D-alanine--poly(phosphoribitol) ligase subunit 1; Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D- alanyl carrier protein (Dcp) DltC. In an ATP-dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall. Belongs to  [...]


ensembl_gene_id: SAMN05421842_1503
symbol: glgC
gene_biotype: protein_coding
description:
  Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.


ensembl_gene_id: SAMN05421842_1507
symbol: glgB
gene_biotype: protein_coding
description:
  1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.


ensembl_gene_id: SAMN05421842_1513
symbol: SFD44940.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation/dephosphorylation.


ensembl_gene_id: SAMN05421842_1533
symbol: SFD46433.1
gene_biotype: protein_coding
description:
  phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).


ensembl_gene_id: SAMN05421842_1545
symbol: rbsA
gene_biotype: protein_coding
description:
  Ribose transport system ATP-binding protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.


ensembl_gene_id: SAMN05421842_1546
symbol: SFD47134.1
gene_biotype: protein_coding
description:
  Ribose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: SAMN05421842_1623
symbol: SFD49990.1
gene_biotype: protein_coding
description:
  Pyruvate formate lyase activating enzyme; Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine; Belongs to the organic radical-activating enzymes family.


ensembl_gene_id: SAMN05421842_1721
symbol: SFD51608.1
gene_biotype: protein_coding
description:
  Transposase (or an inactivated derivative); Required for the transposition of the insertion element.


# pathwayInfo

id: CL:1004
description: Pantothenate metabolic process, and Coenzyme A biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1004_Pantothenate_metabolic_process,_and_Coenzyme_A_biosynthesis


id: CL:1022
description: Sister chromatid cohesion, and DNA duplex unwinding
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1022_Sister_chromatid_cohesion,_and_DNA_duplex_unwinding


id: CL:1036
description: Mixed, incl. Metal cluster binding, and Cysteine and methionine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1036_Mixed,_incl._Metal_cluster_binding,_and_Cysteine_and_methionine_metabolism


id: CL:1037
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1037_Mixed,_incl._4Fe-4S_ferredoxin-type,_iron-sulphur_binding_domain,_and_Cysteine_and_methionine_metabolism

description:
  Mixed, incl. 4Fe-4S ferredoxin-type, iron-sulphur binding domain, and Cysteine and methionine metabolism


id: CL:1038
description: Mixed, incl. 4Fe-4S ferredoxin-type, iron-sulphur binding domain, and FAD/NAD(P)-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1038_Mixed,_incl._4Fe-4S_ferredoxin-type,_iron-sulphur_binding_domain,_and_FAD/NAD(P)-binding_domain


id: CL:1039
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1039_Mixed,_incl._4Fe-4S_ferredoxin-type,_iron-sulphur_binding_domain,_and_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors

description:
  Mixed, incl. 4Fe-4S ferredoxin-type, iron-sulphur binding domain, and Oxidoreductase activity, acting on a sulfur group of donors


id: CL:1040
description: Mixed, incl. 4Fe-4S binding domain, and Citrate cycle (TCA cycle)
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1040_Mixed,_incl._4Fe-4S_binding_domain,_and_Citrate_cycle_(TCA_cycle)


id: CL:1043
description: 4Fe-4S binding domain, and 4Fe-4S binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1043_4Fe-4S_binding_domain,_and_4Fe-4S_binding_domain


id: CL:1044
description: Iron hydrogenase, and 4Fe-4S binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1044_Iron_hydrogenase,_and_4Fe-4S_binding_domain


id: CL:1047
description: Iron hydrogenase, and Flavodoxin domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1047_Iron_hydrogenase,_and_Flavodoxin_domain


id: CL:1065
description: 4Fe-4S binding domain, and Respiratory-chain NADH dehydrogenase 51 Kd subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1065_4Fe-4S_binding_domain,_and_Respiratory-chain_NADH_dehydrogenase_51_Kd_subunit


id: CL:1076
description: Citrate cycle (TCA cycle), and L-lactate dehydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1076_Citrate_cycle_(TCA_cycle),_and_L-lactate_dehydrogenase


id: CL:1089
description: Thioredoxin, and 2-enoate reductase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1089_Thioredoxin,_and_2-enoate_reductase_activity


id: CL:1092
description: 2-enoate reductase activity, and Oxidoreductase activity, acting on the CH-NH2 group of donors
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1092_2-enoate_reductase_activity,_and_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors


id: CL:1113
description: Mixed, incl. Rhodanese Homology Domain, and Nitrite/sulphite reductase 4Fe-4S domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1113_Mixed,_incl._Rhodanese_Homology_Domain,_and_Nitrite/sulphite_reductase_4Fe-4S_domain


id: CL:1115
description: Nitrite/sulphite reductase 4Fe-4S domain, and Cytochrome-c3 hydrogenase, gamma subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1115_Nitrite/sulphite_reductase_4Fe-4S_domain,_and_Cytochrome-c3_hydrogenase,_gamma_subunit


id: CL:1135
description: Sulfur amino acid metabolic process, and Glutathione metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1135_Sulfur_amino_acid_metabolic_process,_and_Glutathione_metabolism


id: CL:1137
description: Sulfur amino acid metabolic process, and Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1137_Sulfur_amino_acid_metabolic_process,_and_Phosphoribosylglycinamide_synthetase,_ATP-grasp_(A)_domain


id: CL:1139
description: Cysteine metabolic process, and Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1139_Cysteine_metabolic_process,_and_Phosphoribosylglycinamide_synthetase,_ATP-grasp_(A)_domain


id: CL:1155
description: Methionine metabolic process, and Transsulfuration
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1155_Methionine_metabolic_process,_and_Transsulfuration


id: CL:1178
description: Mixed, incl. Ribonucleoside monophosphate biosynthetic process, and Permease family
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1178_Mixed,_incl._Ribonucleoside_monophosphate_biosynthetic_process,_and_Permease_family


id: CL:1179
description: Pyrimidine nucleotide biosynthetic process, and beta-Alanine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1179_Pyrimidine_nucleotide_biosynthetic_process,_and_beta-Alanine_metabolism


id: CL:1180
description: Pyrimidine nucleotide biosynthetic process, and beta-Alanine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1180_Pyrimidine_nucleotide_biosynthetic_process,_and_beta-Alanine_metabolism


id: CL:1183
description: Pyrimidine biosynthesis, and Uracil phosphoribosyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1183_Pyrimidine_biosynthesis,_and_Uracil_phosphoribosyltransferase_activity


id: CL:1185
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1185_De_novo_pyrimidine_nucleobase_biosynthetic_process,_and_Carbamoyl-phosphate_synthase_L_chain,_ATP_binding_domain

description:
  De novo pyrimidine nucleobase biosynthetic process, and Carbamoyl-phosphate synthase L chain, ATP binding domain


id: CL:1208
description: beta-Alanine metabolism, and Ferredoxin-NADP reductase (FNR), nucleotide-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1208_beta-Alanine_metabolism,_and_Ferredoxin-NADP_reductase_(FNR),_nucleotide-binding_domain


id: CL:1223
description: Mixed, incl. Glutamate-ammonia ligase activity, and Carbamate kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1223_Mixed,_incl._Glutamate-ammonia_ligase_activity,_and_Carbamate_kinase


id: CL:1234
description: Purine biosynthesis, and Permease family
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1234_Purine_biosynthesis,_and_Permease_family


id: CL:1240
description: De novo IMP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1240_De_novo_IMP_biosynthetic_process


id: CL:1267
description: Mixed, incl. Fatty acid metabolism, and Glucose metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1267_Mixed,_incl._Fatty_acid_metabolism,_and_Glucose_metabolic_process


id: CL:1268
description: Mixed, incl. Butanoate metabolism, and Electron transfer flavoprotein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1268_Mixed,_incl._Butanoate_metabolism,_and_Electron_transfer_flavoprotein_domain


id: CL:1269
description: Butanoate metabolism, and Electron transfer flavoprotein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1269_Butanoate_metabolism,_and_Electron_transfer_flavoprotein_domain


id: CL:1270
description: Electron transfer flavoprotein domain, and Butyrate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1270_Electron_transfer_flavoprotein_domain,_and_Butyrate_metabolic_process


id: CL:1272
description: Butyrate metabolic process, and Electron transfer flavoprotein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1272_Butyrate_metabolic_process,_and_Electron_transfer_flavoprotein_domain


id: CL:1274
description: Butyrate metabolic process, and Acyl-CoA dehydrogenase, middle domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1274_Butyrate_metabolic_process,_and_Acyl-CoA_dehydrogenase,_middle_domain


id: CL:129
description: Translation, and Ribosome biogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:129_Translation,_and_Ribosome_biogenesis


id: CL:1307
description: Mixed, incl. CoA-transferase activity, and Iron-type alcohol dehydrogenase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1307_Mixed,_incl._CoA-transferase_activity,_and_Iron-type_alcohol_dehydrogenase-like


id: CL:1308
description: Iron-type alcohol dehydrogenase-like, and Taurine and hypotaurine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1308_Iron-type_alcohol_dehydrogenase-like,_and_Taurine_and_hypotaurine_metabolism


id: CL:1309
description: Taurine and hypotaurine metabolism, and Iron-type alcohol dehydrogenase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1309_Taurine_and_hypotaurine_metabolism,_and_Iron-type_alcohol_dehydrogenase-like


id: CL:1320
description: CoA-transferase activity, and Iron-type alcohol dehydrogenase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1320_CoA-transferase_activity,_and_Iron-type_alcohol_dehydrogenase-like


id: CL:1329
description: Lysine degradation, and Acetokinase family
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1329_Lysine_degradation,_and_Acetokinase_family


id: CL:133
description: Ribosome, and Regulation of translation
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:133_Ribosome,_and_Regulation_of_translation


id: CL:1339
description: Pyruvate formate lyase-like, and Organic radical enzyme activase
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1339_Pyruvate_formate_lyase-like,_and_Organic_radical_enzyme_activase


id: CL:134
description: Ribosome, and Regulation of translation
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:134_Ribosome,_and_Regulation_of_translation


id: CL:135
description: Ribosome, and Regulation of translation
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:135_Ribosome,_and_Regulation_of_translation


id: CL:1368
description: Mixed, incl. Fatty acid biosynthesis, and Phosphopantetheine
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1368_Mixed,_incl._Fatty_acid_biosynthesis,_and_Phosphopantetheine


id: CL:1370
description: Fatty acid biosynthesis, and Biotin
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1370_Fatty_acid_biosynthesis,_and_Biotin


id: CL:1373
description: Fatty acid biosynthesis, and Biotin
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1373_Fatty_acid_biosynthesis,_and_Biotin


id: CL:138
description: Ribosome, and Regulation of translation
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:138_Ribosome,_and_Regulation_of_translation


id: CL:1380
description: Carboxyl transferase domain, and 3-oxoacyl-[acyl-carrier-protein] synthase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1380_Carboxyl_transferase_domain,_and_3-oxoacyl-[acyl-carrier-protein]_synthase_activity


id: CL:1416
description: Mixed, incl. AMP-binding, conserved site, and Membrane bound O-acyl transferase, MBOAT
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1416_Mixed,_incl._AMP-binding,_conserved_site,_and_Membrane_bound_O-acyl_transferase,_MBOAT


id: CL:1418
description: Peptidase M16, N-terminal, and FAD dependent oxidoreductase
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1418_Peptidase_M16,_N-terminal,_and_FAD_dependent_oxidoreductase


id: CL:143
description: Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:143_Ribosome,_and_Translation_regulator_activity


id: CL:1432
description: Membrane bound O-acyl transferase, MBOAT, and D-Alanine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1432_Membrane_bound_O-acyl_transferase,_MBOAT,_and_D-Alanine_metabolism


id: CL:1446
description: Mixed, incl. Aldo-keto reductase, and Tyrosine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1446_Mixed,_incl._Aldo-keto_reductase,_and_Tyrosine_metabolism


id: CL:1448
description: Mixed, incl. Amine oxidase, and SNF2, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1448_Mixed,_incl._Amine_oxidase,_and_SNF2,_N-terminal


id: CL:1469
description: Cellular amino acid biosynthetic process, and Pyridoxal phosphate-dependent transferase
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1469_Cellular_amino_acid_biosynthetic_process,_and_Pyridoxal_phosphate-dependent_transferase


id: CL:147
description: Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:147_Ribosome,_and_Translation_regulator_activity


id: CL:1470
description: Mixed, incl. Amino-acid biosynthesis, and Aminotransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1470_Mixed,_incl._Amino-acid_biosynthesis,_and_Aminotransferase


id: CL:1471
description: Amino-acid biosynthesis, and Transaminase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1471_Amino-acid_biosynthesis,_and_Transaminase_activity


id: CL:1472
description: Amino-acid biosynthesis, and Aminotransferases, class-I, pyridoxal-phosphate-binding site
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1472_Amino-acid_biosynthesis,_and_Aminotransferases,_class-I,_pyridoxal-phosphate-binding_site


id: CL:1473
description: Branched-chain amino acid metabolic process, and Aspartate family amino acid biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1473_Branched-chain_amino_acid_metabolic_process,_and_Aspartate_family_amino_acid_biosynthetic_process


id: CL:1474
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1474_Aspartate_family_amino_acid_biosynthetic_process,_and_Aminotransferases,_class-I,_pyridoxal-phosphate-binding_site

description:
  Aspartate family amino acid biosynthetic process, and Aminotransferases, class-I, pyridoxal-phosphate-binding site


id: CL:1475
description: Asparagine metabolic process, and Aminotransferases, class-I, pyridoxal-phosphate-binding site
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1475_Asparagine_metabolic_process,_and_Aminotransferases,_class-I,_pyridoxal-phosphate-binding_site


id: CL:1478
description: Novobiocin biosynthesis, and Asparagine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1478_Novobiocin_biosynthesis,_and_Asparagine_metabolic_process


id: CL:150
description: Structural constituent of ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:150_Structural_constituent_of_ribosome,_and_Translation_regulator_activity


id: CL:151
description: Structural constituent of ribosome, and Translational (tr)-type GTP-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:151_Structural_constituent_of_ribosome,_and_Translational_(tr)-type_GTP-binding_domain


id: CL:1513
description: Branched-chain amino acid metabolic process, and ACT domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1513_Branched-chain_amino_acid_metabolic_process,_and_ACT_domain


id: CL:1515
description: Valine, leucine and isoleucine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1515_Valine,_leucine_and_isoleucine_biosynthesis


id: CL:1517
description: C5-Branched dibasic acid metabolism, and Branched-chain amino acid biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1517_C5-Branched_dibasic_acid_metabolism,_and_Branched-chain_amino_acid_biosynthesis


id: CL:1548
description: Aromatic amino acid family metabolic process, and ADC synthase
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1548_Aromatic_amino_acid_family_metabolic_process,_and_ADC_synthase


id: CL:1550
description: Tryptophan biosynthesis, and Oxo-acid-lyase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1550_Tryptophan_biosynthesis,_and_Oxo-acid-lyase_activity


id: CL:159
description: Large ribosomal subunit, and Ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:159_Large_ribosomal_subunit,_and_Ribosome


id: CL:1593
description: Histidine biosynthesis, and L-serine biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1593_Histidine_biosynthesis,_and_L-serine_biosynthetic_process


id: CL:1599
description: Histidine biosynthesis protein, and Imidazoleglycerol-phosphate synthase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1599_Histidine_biosynthesis_protein,_and_Imidazoleglycerol-phosphate_synthase_activity


id: CL:1626
description: Mixed, incl. D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain, and Microbody
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1626_Mixed,_incl._D-isomer_specific_2-hydroxyacid_dehydrogenase,_catalytic_domain,_and_Microbody


id: CL:1628
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1628_Mixed,_incl._L-serine_ammonia-lyase_activity,_and_Phosphoglycerate/bisphosphoglycerate_mutase,_active_site

description:
  Mixed, incl. L-serine ammonia-lyase activity, and Phosphoglycerate/bisphosphoglycerate mutase, active site


id: CL:1647
description: Biosynthesis of various secondary metabolites - part 2, and Microbody
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1647_Biosynthesis_of_various_secondary_metabolites_-_part_2,_and_Microbody


id: CL:1662
description: Arginine metabolic process, and Arginine and proline metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1662_Arginine_metabolic_process,_and_Arginine_and_proline_metabolism


id: CL:1664
description: Arginine biosynthesis, and Ornithine carbamoyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1664_Arginine_biosynthesis,_and_Ornithine_carbamoyltransferase_activity


id: CL:1695
description: Polyamine biosynthesis, and Orn/Lys/Arg decarboxylase, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1695_Polyamine_biosynthesis,_and_Orn/Lys/Arg_decarboxylase,_C-terminal


id: CL:1714
description: Cell division, and Regulation of cell shape
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1714_Cell_division,_and_Regulation_of_cell_shape


id: CL:1718
description: Cell division, and Alanine racemase, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1718_Cell_division,_and_Alanine_racemase,_N-terminal


id: CL:1719
description: Cell shape, and Cell division site
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1719_Cell_shape,_and_Cell_division_site


id: CL:1724
description: Mur ligase, C-terminal domain superfamily, and Glycosyl transferase family 4
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1724_Mur_ligase,_C-terminal_domain_superfamily,_and_Glycosyl_transferase_family_4


id: CL:1737
description: UDP-N-acetylgalactosamine metabolic process, and RimK-like ATP-grasp domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1737_UDP-N-acetylgalactosamine_metabolic_process,_and_RimK-like_ATP-grasp_domain


id: CL:1747
description: Mixed, incl. Cell division site, and Cell cycle, FtsW / RodA / SpoVE, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1747_Mixed,_incl._Cell_division_site,_and_Cell_cycle,_FtsW_/_RodA_/_SpoVE,_conserved_site


id: CL:1749
description: Reproductive process, and Cell cycle, FtsW / RodA / SpoVE, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1749_Reproductive_process,_and_Cell_cycle,_FtsW_/_RodA_/_SpoVE,_conserved_site


id: CL:1770
description: Mixed, incl. Protein of unknown function DUF881, and Identical protein binding
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1770_Mixed,_incl._Protein_of_unknown_function_DUF881,_and_Identical_protein_binding


id: CL:1772
description: Mixed, incl. Alanine racemase, N-terminal, and Reproductive process
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1772_Mixed,_incl._Alanine_racemase,_N-terminal,_and_Reproductive_process


id: CL:178
description: Ribosomal protein L2, domain 2, and Large ribosomal subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:178_Ribosomal_protein_L2,_domain_2,_and_Large_ribosomal_subunit


id: CL:1791
description: Mixed, incl. Actin, and Inosine triphosphate pyrophosphatase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1791_Mixed,_incl._Actin,_and_Inosine_triphosphate_pyrophosphatase-like


id: CL:1808
description: Mixed, incl. DNA excision, and PDZ domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1808_Mixed,_incl._DNA_excision,_and_PDZ_domain


id: CL:1809
description: Mixed, incl. DNA excision, and PDZ domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1809_Mixed,_incl._DNA_excision,_and_PDZ_domain


id: CL:1811
description: DNA excision, and Lipid-linked peptidoglycan transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1811_DNA_excision,_and_Lipid-linked_peptidoglycan_transporter_activity


id: CL:1828
description: Mixed, incl. Dimeric alpha-beta barrel, and Regulation of sporulation
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1828_Mixed,_incl._Dimeric_alpha-beta_barrel,_and_Regulation_of_sporulation


id: CL:1844
description: Mixed, incl. Serine-type exopeptidase activity, and Beta-lactamase, class-A
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1844_Mixed,_incl._Serine-type_exopeptidase_activity,_and_Beta-lactamase,_class-A


id: CL:1846
description: Serine-type exopeptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1846_Serine-type_exopeptidase_activity


id: CL:1867
description: Mixed, incl. Sulfur relay system, and Peptidase U32
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1867_Mixed,_incl._Sulfur_relay_system,_and_Peptidase_U32


id: CL:1868
description: Mixed, incl. Sulfur relay system, and RNA capping
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1868_Mixed,_incl._Sulfur_relay_system,_and_RNA_capping


id: CL:1869
description: Mostly uncharacterized, incl. RNA capping, and Peptidase U32
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1869_Mostly_uncharacterized,_incl._RNA_capping,_and_Peptidase_U32


id: CL:1870
description: Mixed, incl. RNA capping, and Peptidase U32
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1870_Mixed,_incl._RNA_capping,_and_Peptidase_U32


id: CL:1883
description: Mixed, incl. RuvB-like P-loop domain, and Sulfurtransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1883_Mixed,_incl._RuvB-like_P-loop_domain,_and_Sulfurtransferase_activity


id: CL:1892
description: Iron-sulfur cluster assembly, and Transcription regulator Rrf2
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1892_Iron-sulfur_cluster_assembly,_and_Transcription_regulator_Rrf2


id: CL:1895
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1895_Iron-sulfur_cluster_assembly,_and_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen

description:
  Iron-sulfur cluster assembly, and Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen


id: CL:1913
description: Mixed, incl. Peptidase U32, and CAT RNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1913_Mixed,_incl._Peptidase_U32,_and_CAT_RNA-binding_domain


id: CL:1924
description: Mixed, incl. Glycerophospholipid metabolism, and Glycerolipid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1924_Mixed,_incl._Glycerophospholipid_metabolism,_and_Glycerolipid_metabolism


id: CL:1926
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1926_Mixed,_incl._Glycerolipid_metabolism,_and_Phosphotransferase_activity,_for_other_substituted_phosphate_groups

description:
  Mixed, incl. Glycerolipid metabolism, and Phosphotransferase activity, for other substituted phosphate groups


id: CL:1927
description: Mixed, incl. Glycerolipid metabolism, and CDP-alcohol phosphatidyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1927_Mixed,_incl._Glycerolipid_metabolism,_and_CDP-alcohol_phosphatidyltransferase


id: CL:1928
description: Glycerophospholipid metabolism, and Triglyceride lipase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1928_Glycerophospholipid_metabolism,_and_Triglyceride_lipase_activity


id: CL:1929
description: Glycerophospholipid metabolism, and Triglyceride lipase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1929_Glycerophospholipid_metabolism,_and_Triglyceride_lipase_activity


id: CL:193
description: Small ribosomal subunit, and rRNA-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:193_Small_ribosomal_subunit,_and_rRNA-binding


id: CL:1931
description: Phosphate acyltransferases, and Triglyceride lipase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1931_Phosphate_acyltransferases,_and_Triglyceride_lipase_activity


id: CL:1943
description: CDP-alcohol phosphatidyltransferase, and Glycerolipid biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1943_CDP-alcohol_phosphatidyltransferase,_and_Glycerolipid_biosynthetic_process


id: CL:1952
description: Mixed, incl. Acid phosphatase homologues, and Antibiotic resistance
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1952_Mixed,_incl._Acid_phosphatase_homologues,_and_Antibiotic_resistance


id: CL:1964
description: Sulfatase, and Glycosyltransferase subfamily 4-like, N-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1964_Sulfatase,_and_Glycosyltransferase_subfamily_4-like,_N-terminal_domain


id: CL:1978
description: Mixed, incl. methylmalonyl-CoA epimerase activity, and Acid phosphatase homologues
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1978_Mixed,_incl._methylmalonyl-CoA_epimerase_activity,_and_Acid_phosphatase_homologues


id: CL:1992
description: Mixed, incl. Glycerophospholipid metabolism, and Alditol metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1992_Mixed,_incl._Glycerophospholipid_metabolism,_and_Alditol_metabolic_process


id: CL:1994
description: Mixed, incl. Alditol metabolic process, and Glycerol-1-phosphate dehydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1994_Mixed,_incl._Alditol_metabolic_process,_and_Glycerol-1-phosphate_dehydrogenase


id: CL:1996
description: Glycerol-1-phosphate dehydrogenase, and Haloacid dehalogenase-like hydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:1996_Glycerol-1-phosphate_dehydrogenase,_and_Haloacid_dehalogenase-like_hydrolase


id: CL:2027
description: Mixed, incl. Glycerol uptake operon antiterminator, and FAD binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2027_Mixed,_incl._Glycerol_uptake_operon_antiterminator,_and_FAD_binding_domain


id: CL:2050
description: Carbohydrate metabolic process, and Carbohydrate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2050_Carbohydrate_metabolic_process,_and_Carbohydrate_transport


id: CL:2051
description: Carbohydrate metabolic process, and Phosphotransferase system (PTS)
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2051_Carbohydrate_metabolic_process,_and_Phosphotransferase_system_(PTS)


id: CL:2052
description: Glycolysis / Gluconeogenesis, and Starch and sucrose metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2052_Glycolysis_/_Gluconeogenesis,_and_Starch_and_sucrose_metabolism


id: CL:2053
description: Glycolysis / Gluconeogenesis, and Phosphotransferase system
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2053_Glycolysis_/_Gluconeogenesis,_and_Phosphotransferase_system


id: CL:2054
description: Phosphotransferase system, and Galactose metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2054_Phosphotransferase_system,_and_Galactose_metabolism


id: CL:2057
description: Phosphotransferase system, and Streptomycin biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2057_Phosphotransferase_system,_and_Streptomycin_biosynthesis


id: CL:2059
description: Phosphotransferase system, and ROK family
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2059_Phosphotransferase_system,_and_ROK_family


id: CL:2061
description: Phosphotransferase system, and ROK family
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2061_Phosphotransferase_system,_and_ROK_family


id: CL:2064
description: Glucose permease domain IIB, and ROK family
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2064_Glucose_permease_domain_IIB,_and_ROK_family


id: CL:2067
description: Glucose permease domain IIB, and ROK family
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2067_Glucose_permease_domain_IIB,_and_ROK_family


id: CL:2071
description: Phosphotransferase system, sugar-specific permease EIIA type 1
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2071_Phosphotransferase_system,_sugar-specific_permease_EIIA_type_1


id: CL:2113
description: Family 4 glycosyl hydrolase, and RpiR-like, SIS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2113_Family_4_glycosyl_hydrolase,_and_RpiR-like,_SIS_domain


id: CL:2125
description: Phosphoglucosamine mutase activity, and N-acetylglucosamine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2125_Phosphoglucosamine_mutase_activity,_and_N-acetylglucosamine_metabolic_process


id: CL:2145
description: Glycolytic process, and Pentose phosphate pathway
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2145_Glycolytic_process,_and_Pentose_phosphate_pathway


id: CL:2146
description: Glycolytic process, and Fructose-bisphosphate aldolase class-II
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2146_Glycolytic_process,_and_Fructose-bisphosphate_aldolase_class-II


id: CL:2148
description: Glycolysis, and Fructose-bisphosphate aldolase class-II
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2148_Glycolysis,_and_Fructose-bisphosphate_aldolase_class-II


id: CL:2150
description: Glycolysis, and Fructose-bisphosphate aldolase class-II
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2150_Glycolysis,_and_Fructose-bisphosphate_aldolase_class-II


id: CL:2165
description: diphosphate-fructose-6-phosphate 1-phosphotransferase activity, and Pyruvate kinase, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2165_diphosphate-fructose-6-phosphate_1-phosphotransferase_activity,_and_Pyruvate_kinase,_C-terminal


id: CL:2188
description: Thiamin diphosphate-binding fold, and NADPH regeneration
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2188_Thiamin_diphosphate-binding_fold,_and_NADPH_regeneration


id: CL:2204
description: Glycoside hydrolase superfamily, and Amino acid/polyamine transporter I
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2204_Glycoside_hydrolase_superfamily,_and_Amino_acid/polyamine_transporter_I


id: CL:2207
description: Glycogen metabolic process, and Immunoglobulin E-set
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2207_Glycogen_metabolic_process,_and_Immunoglobulin_E-set


id: CL:2235
description: Maltogenic Amylase, C-terminal, and Amino acid permease
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2235_Maltogenic_Amylase,_C-terminal,_and_Amino_acid_permease


id: CL:2249
description: Phosphotransferase system (PTS), and Inositol metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2249_Phosphotransferase_system_(PTS),_and_Inositol_metabolic_process


id: CL:2250
description: Mixed, incl. Ascorbate and aldarate metabolism, and DeoR C-terminal sensor domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2250_Mixed,_incl._Ascorbate_and_aldarate_metabolism,_and_DeoR_C-terminal_sensor_domain


id: CL:2251
description: DeoR C-terminal sensor domain, and Phosphotransferase system (PTS)
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2251_DeoR_C-terminal_sensor_domain,_and_Phosphotransferase_system_(PTS)


id: CL:2252
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2252_Mixed,_incl._Sorbitol_phosphotransferase_enzyme_II_N-terminus,_and_Phosphotransferase_system,_EIIB_component,_type_2

description:
  Mixed, incl. Sorbitol phosphotransferase enzyme II N-terminus, and Phosphotransferase system, EIIB component, type 2


id: CL:2254
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2254_Sorbitol_phosphotransferase_enzyme_II_N-terminus,_and_Short-chain_dehydrogenase/reductase,_conserved_site

description:
  Sorbitol phosphotransferase enzyme II N-terminus, and Short-chain dehydrogenase/reductase, conserved site


id: CL:2275
description: DeoR C-terminal sensor domain, and Disaccharide metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2275_DeoR_C-terminal_sensor_domain,_and_Disaccharide_metabolic_process


id: CL:2289
description: Ascorbate and aldarate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2289_Ascorbate_and_aldarate_metabolism


id: CL:2309
description: Inositol metabolic process, and Fructose and mannose metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2309_Inositol_metabolic_process,_and_Fructose_and_mannose_metabolism


id: CL:231
description: Structural constituent of ribosome, and Transcription antitermination
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:231_Structural_constituent_of_ribosome,_and_Transcription_antitermination


id: CL:2310
description: Fructose and mannose metabolism, and L-threonine 3-dehydrogenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2310_Fructose_and_mannose_metabolism,_and_L-threonine_3-dehydrogenase_activity


id: CL:2313
description: Mixed, incl. D-glucosamine PTS permease activity, and PTS system sorbose subfamily IIB component
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2313_Mixed,_incl._D-glucosamine_PTS_permease_activity,_and_PTS_system_sorbose_subfamily_IIB_component


id: CL:2357
description: Periplasmic binding protein-like I, and Ribokinase
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2357_Periplasmic_binding_protein-like_I,_and_Ribokinase


id: CL:2359
description: Mixed, incl. Periplasmic binding protein, and D-ribose metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2359_Mixed,_incl._Periplasmic_binding_protein,_and_D-ribose_metabolic_process


id: CL:236
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:236_Structural_constituent_of_ribosome


id: CL:2363
description: Mixed, incl. Periplasmic binding protein domain, and D-ribose metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2363_Mixed,_incl._Periplasmic_binding_protein_domain,_and_D-ribose_metabolic_process


id: CL:2364
description: Periplasmic binding protein domain, and ABC transporter, permease
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2364_Periplasmic_binding_protein_domain,_and_ABC_transporter,_permease


id: CL:2373
description: D-ribose metabolic process, and ABC-type carbohydrate transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2373_D-ribose_metabolic_process,_and_ABC-type_carbohydrate_transporter_activity


id: CL:238
description: Mixed, incl. Zinc-binding ribosomal protein, and L28p-like
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:238_Mixed,_incl._Zinc-binding_ribosomal_protein,_and_L28p-like


id: CL:2395
description: Mixed, incl. Ribokinase, and C4-dicarboxylate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2395_Mixed,_incl._Ribokinase,_and_C4-dicarboxylate_transport


id: CL:2407
description: RNA polymerase sigma factor 54 interaction domain, and Starch and sucrose metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2407_RNA_polymerase_sigma_factor_54_interaction_domain,_and_Starch_and_sucrose_metabolism


id: CL:2409
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2409_Mixed,_incl._PTS_system,_Lactose/Cellobiose_specific_IIA_subunit,_and_N-acetylmuramic_acid_metabolic_process

description:
  Mixed, incl. PTS system, Lactose/Cellobiose specific IIA subunit, and N-acetylmuramic acid metabolic process


id: CL:2410
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2410_Mixed,_incl._PTS_system,_Lactose/Cellobiose_specific_IIA_subunit,_and_Phosphotransferase_system,_EIIB_component,_type_3

description:
  Mixed, incl. PTS system, Lactose/Cellobiose specific IIA subunit, and Phosphotransferase system, EIIB component, type 3


id: CL:2412
description: PTS system, Lactose/Cellobiose specific IIA subunit, and Glycoside hydrolase family 1
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2412_PTS_system,_Lactose/Cellobiose_specific_IIA_subunit,_and_Glycoside_hydrolase_family_1


id: CL:2436
description: N-acetylmuramic acid metabolic process, and RpiR-like, SIS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2436_N-acetylmuramic_acid_metabolic_process,_and_RpiR-like,_SIS_domain


id: CL:2451
description: RNA polymerase sigma factor 54 interaction domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2451_RNA_polymerase_sigma_factor_54_interaction_domain


id: CL:2455
description: Sigma-54 interaction domain, ATP-binding site 2
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2455_Sigma-54_interaction_domain,_ATP-binding_site_2


id: CL:2473
description: UbiC transcription regulator-associated, and Cupin domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2473_UbiC_transcription_regulator-associated,_and_Cupin_domain


id: CL:2487
description: Mixed, incl. Carbohydrate kinase, FGGY, and Symporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2487_Mixed,_incl._Carbohydrate_kinase,_FGGY,_and_Symporter_activity


id: CL:2489
description: Mixed, incl. Carbohydrate kinase, FGGY, and Protein of unknown function DUF4867
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2489_Mixed,_incl._Carbohydrate_kinase,_FGGY,_and_Protein_of_unknown_function_DUF4867


id: CL:2492
description: Mixed, incl. Carbohydrate kinase, FGGY, conserved site, and Citrate transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2492_Mixed,_incl._Carbohydrate_kinase,_FGGY,_conserved_site,_and_Citrate_transporter


id: CL:2509
description: Mixed, incl. AAA domain, and Protein of unknown function DUF4867
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2509_Mixed,_incl._AAA_domain,_and_Protein_of_unknown_function_DUF4867


id: CL:2524
description: Sugar/inositol transporter, and MFS_1 like family
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2524_Sugar/inositol_transporter,_and_MFS_1_like_family


id: CL:2538
description: Mixed, incl. Cellular aldehyde metabolic process, and Thiamine biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2538_Mixed,_incl._Cellular_aldehyde_metabolic_process,_and_Thiamine_biosynthetic_process


id: CL:2539
description: Mixed, incl. Repressor, and UVR domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2539_Mixed,_incl._Repressor,_and_UVR_domain


id: CL:2540
description: Mixed, incl. UVR domain, and PIN-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2540_Mixed,_incl._UVR_domain,_and_PIN-like_domain_superfamily


id: CL:2543
description: UVR domain, and Lactone catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2543_UVR_domain,_and_Lactone_catabolic_process


id: CL:2560
description: Mixed, incl. Manganese ion transport, and Multidrug and toxic compound extrusion MepA-like
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2560_Mixed,_incl._Manganese_ion_transport,_and_Multidrug_and_toxic_compound_extrusion_MepA-like


id: CL:2573
description: Cellular aldehyde metabolic process, and Thiamine biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2573_Cellular_aldehyde_metabolic_process,_and_Thiamine_biosynthetic_process


id: CL:2605
description: Mixed, incl. Elongator protein 3, MiaB family, Radical SAM, and DNA helicase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2605_Mixed,_incl._Elongator_protein_3,_MiaB_family,_Radical_SAM,_and_DNA_helicase_activity


id: CL:2606
description: Mixed, incl. Elongator protein 3, MiaB family, Radical SAM, and Queuosine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2606_Mixed,_incl._Elongator_protein_3,_MiaB_family,_Radical_SAM,_and_Queuosine_biosynthesis


id: CL:2607
description: Mixed, incl. Elongator protein 3, MiaB family, Radical SAM, and Queuosine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2607_Mixed,_incl._Elongator_protein_3,_MiaB_family,_Radical_SAM,_and_Queuosine_biosynthesis


id: CL:2609
description: Mixed, incl. Queuosine biosynthesis, and Holliday junction helicase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2609_Mixed,_incl._Queuosine_biosynthesis,_and_Holliday_junction_helicase_complex


id: CL:2612
description: Holliday junction helicase complex, and Queuosine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2612_Holliday_junction_helicase_complex,_and_Queuosine_biosynthesis


id: CL:2632
description: UPF0313, C-terminal, and Anaerobic coproporphyrinogen-III oxidase
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2632_UPF0313,_C-terminal,_and_Anaerobic_coproporphyrinogen-III_oxidase


id: CL:2646
description: Mixed, incl. Calcium, and RNA polymerase binding
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2646_Mixed,_incl._Calcium,_and_RNA_polymerase_binding


id: CL:265
description: Transcription antitermination, and Ribosomal protein S1-like
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:265_Transcription_antitermination,_and_Ribosomal_protein_S1-like


id: CL:2659
description: Mixed, incl. RelA/SpoT, and DNA helicase, UvrD/REP type
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2659_Mixed,_incl._RelA/SpoT,_and_DNA_helicase,_UvrD/REP_type


id: CL:2660
description: Mixed, incl. PD-(D/E)XK nuclease superfamily, and UvrD/REP helicase N-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2660_Mixed,_incl._PD-(D/E)XK_nuclease_superfamily,_and_UvrD/REP_helicase_N-terminal_domain


id: CL:2661
description: PD-(D/E)XK nuclease superfamily, and AAA domain, group 15
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2661_PD-(D/E)XK_nuclease_superfamily,_and_AAA_domain,_group_15


id: CL:2670
description: Mixed, incl. dGTP catabolic process, and tRNA (adenine) methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2670_Mixed,_incl._dGTP_catabolic_process,_and_tRNA_(adenine)_methyltransferase_activity


id: CL:2694
description: Mixed, incl. Phosphate ion transport, and Pseudouridine synthase, RsuA/RluB/E/F
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2694_Mixed,_incl._Phosphate_ion_transport,_and_Pseudouridine_synthase,_RsuA/RluB/E/F


id: CL:2695
description: Mixed, incl. Pseudouridine synthase, RsuA/RluB/E/F, and Dynamin, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2695_Mixed,_incl._Pseudouridine_synthase,_RsuA/RluB/E/F,_and_Dynamin,_N-terminal


id: CL:2697
description: Mixed, incl. Pseudouridine synthase, RsuA/RluB/E/F, and PUA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2697_Mixed,_incl._Pseudouridine_synthase,_RsuA/RluB/E/F,_and_PUA_domain


id: CL:2699
description: Chromosome partition, and Pseudouridine synthase, RsuA/RluB/E/F
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2699_Chromosome_partition,_and_Pseudouridine_synthase,_RsuA/RluB/E/F


id: CL:2730
description: Mixed, incl. Phosphate ion transport, and PDZ domain 6
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2730_Mixed,_incl._Phosphate_ion_transport,_and_PDZ_domain_6


id: CL:2757
description: Mixed, incl. One-carbon metabolic process, and Peptidase M18
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2757_Mixed,_incl._One-carbon_metabolic_process,_and_Peptidase_M18


id: CL:2770
description: Mixed, incl. Nickel cation binding, and NlpC/P60 family
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2770_Mixed,_incl._Nickel_cation_binding,_and_NlpC/P60_family


id: CL:2772
description: Nickel cation binding, and FAD-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2772_Nickel_cation_binding,_and_FAD-binding_domain


id: CL:2784
description: Mixed, incl. Phosphodiesterase MJ0936/Vps29, and Inosine triphosphate pyrophosphatase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2784_Mixed,_incl._Phosphodiesterase_MJ0936/Vps29,_and_Inosine_triphosphate_pyrophosphatase-like


id: CL:2793
description: Mixed, incl. beta-Lactam resistance, and Multi antimicrobial extrusion protein
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2793_Mixed,_incl._beta-Lactam_resistance,_and_Multi_antimicrobial_extrusion_protein


id: CL:2794
description: Mixed, incl. Bacterial regulatory proteins, tetR family, and Major facilitator superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2794_Mixed,_incl._Bacterial_regulatory_proteins,_tetR_family,_and_Major_facilitator_superfamily


id: CL:2795
description: Mixed, incl. Bacterial regulatory proteins, tetR family, and Major facilitator superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2795_Mixed,_incl._Bacterial_regulatory_proteins,_tetR_family,_and_Major_facilitator_superfamily


id: CL:2796
description: Mixed, incl. Bacterial regulatory proteins, tetR family, and Methyltransferase type 11
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2796_Mixed,_incl._Bacterial_regulatory_proteins,_tetR_family,_and_Methyltransferase_type_11


id: CL:2797
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2797_Mixed,_incl._Bacterial_regulatory_proteins,_tetR_family,_and_tRNA_thiolation_protein,_TtcA/Ctu1_type

description:
  Mixed, incl. Bacterial regulatory proteins, tetR family, and tRNA thiolation protein, TtcA/Ctu1 type


id: CL:2799
description: Bacterial regulatory proteins, tetR family, and tRNA thiolation protein, TtcA/Ctu1 type
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2799_Bacterial_regulatory_proteins,_tetR_family,_and_tRNA_thiolation_protein,_TtcA/Ctu1_type


id: CL:2800
description: tRNA thiolation protein, TtcA/Ctu1 type, and CarD-like/TRCF domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2800_tRNA_thiolation_protein,_TtcA/Ctu1_type,_and_CarD-like/TRCF_domain


id: CL:2809
description: Bacterial regulatory proteins, tetR family
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2809_Bacterial_regulatory_proteins,_tetR_family


id: CL:281
description: Mixed, incl. UTP metabolic process, and Translation elongation factor EF1B/ribosomal protein S6
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:281_Mixed,_incl._UTP_metabolic_process,_and_Translation_elongation_factor_EF1B/ribosomal_protein_S6


id: CL:2828
description: Mixed, incl. Methyltransferase type 11, and FAD-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2828_Mixed,_incl._Methyltransferase_type_11,_and_FAD-binding_domain


id: CL:2843
description: Drug resistance transporter EmrB-like, and Major facilitator superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2843_Drug_resistance_transporter_EmrB-like,_and_Major_facilitator_superfamily


id: CL:2852
description: Mixed, incl. Phenazine biosynthesis, and DNA transport
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2852_Mixed,_incl._Phenazine_biosynthesis,_and_DNA_transport


id: CL:2863
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2863_Mixed,_incl._Multi_antimicrobial_extrusion_protein,_and_Transcriptional_regulator_TetR,_C-terminal,_Firmicutes_type

description:
  Mixed, incl. Multi antimicrobial extrusion protein, and Transcriptional regulator TetR, C-terminal, Firmicutes type


id: CL:2864
description: Mixed, incl. Multi antimicrobial extrusion protein, and Oleate hydratase
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2864_Mixed,_incl._Multi_antimicrobial_extrusion_protein,_and_Oleate_hydratase


id: CL:2866
description: Oleate hydratase, and Transcriptional regulator TetR, C-terminal, Firmicutes type
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2866_Oleate_hydratase,_and_Transcriptional_regulator_TetR,_C-terminal,_Firmicutes_type


id: CL:2878
description: Multi antimicrobial extrusion protein, and Carbon-oxygen lyase activity, acting on phosphates
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2878_Multi_antimicrobial_extrusion_protein,_and_Carbon-oxygen_lyase_activity,_acting_on_phosphates


id: CL:2889
description: Mixed, incl. Peptide deformylase, and Protein kinase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2889_Mixed,_incl._Peptide_deformylase,_and_Protein_kinase_domain


id: CL:2904
description: Proline biosynthesis, and Bacterial PH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2904_Proline_biosynthesis,_and_Bacterial_PH_domain


id: CL:2927
description: Mixed, incl. Polysaccharide biosynthetic process, and Cell wall/choline-binding repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2927_Mixed,_incl._Polysaccharide_biosynthetic_process,_and_Cell_wall/choline-binding_repeat


id: CL:2928
description: Mixed, incl. Polysaccharide biosynthetic process, and Cell wall/choline-binding repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2928_Mixed,_incl._Polysaccharide_biosynthetic_process,_and_Cell_wall/choline-binding_repeat


id: CL:2929
description: Mixed, incl. Polysaccharide biosynthetic process, and Cell wall/choline-binding repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2929_Mixed,_incl._Polysaccharide_biosynthetic_process,_and_Cell_wall/choline-binding_repeat


id: CL:2930
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2930_Mixed,_incl._Cell_wall/choline-binding_repeat,_and_Tetratricopeptide-like_helical_domain_superfamily

description:
  Mixed, incl. Cell wall/choline-binding repeat, and Tetratricopeptide-like helical domain superfamily


id: CL:2931
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2931_Mixed,_incl._Cell_wall/choline-binding_repeat,_and_Tetratricopeptide-like_helical_domain_superfamily

description:
  Mixed, incl. Cell wall/choline-binding repeat, and Tetratricopeptide-like helical domain superfamily


id: CL:2932
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2932_Mixed,_incl._Cell_wall/choline-binding_repeat,_and_Tetratricopeptide-like_helical_domain_superfamily

description:
  Mixed, incl. Cell wall/choline-binding repeat, and Tetratricopeptide-like helical domain superfamily


id: CL:2934
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2934_Mixed,_incl._Cell_wall/choline-binding_repeat,_and_Tetratricopeptide-like_helical_domain_superfamily

description:
[cell repeats an earlier one in this file: 100 characters]


id: CL:2937
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2937_Mixed,_incl._Cell_wall/choline-binding_repeat,_and_Tetratricopeptide-like_helical_domain_superfamily

description:
[cell repeats an earlier one in this file: 100 characters]


id: CL:2938
description: Mixed, incl. Cell wall/choline-binding repeat, and Dynamin family
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2938_Mixed,_incl._Cell_wall/choline-binding_repeat,_and_Dynamin_family


id: CL:2939
description: Mixed, incl. Cell wall/choline-binding repeat, and Dynamin family
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2939_Mixed,_incl._Cell_wall/choline-binding_repeat,_and_Dynamin_family


id: CL:2941
description: Mixed, incl. Cell wall/choline-binding repeat, and Dynamin family
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2941_Mixed,_incl._Cell_wall/choline-binding_repeat,_and_Dynamin_family


id: CL:2946
description: Mixed, incl. Dynamin family, and Cell wall/choline-binding repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2946_Mixed,_incl._Dynamin_family,_and_Cell_wall/choline-binding_repeat


id: CL:2948
description: Mixed, incl. Dynamin family, and Cadherin-like beta sandwich domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2948_Mixed,_incl._Dynamin_family,_and_Cadherin-like_beta_sandwich_domain


id: CL:2952
description: Mixed, incl. Dynamin family, and Glycoside hydrolase, family 25
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2952_Mixed,_incl._Dynamin_family,_and_Glycoside_hydrolase,_family_25


id: CL:2956
description: Dynamin family, and Glycoside hydrolase, family 25
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:2956_Dynamin_family,_and_Glycoside_hydrolase,_family_25


id: CL:3003
description: Cell wall/choline-binding repeat, and Nucleotidyl transferase
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3003_Cell_wall/choline-binding_repeat,_and_Nucleotidyl_transferase


id: CL:3005
description: Mixed, incl. Nucleotidyl transferase, and MobA-like NTP transferase
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3005_Mixed,_incl._Nucleotidyl_transferase,_and_MobA-like_NTP_transferase


id: CL:3028
description: Mixed, incl. Tetratricopeptide-like helical domain superfamily, and Protein glycosylation
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3028_Mixed,_incl._Tetratricopeptide-like_helical_domain_superfamily,_and_Protein_glycosylation


id: CL:3030
description: Mixed, incl. Tetratricopeptide repeat, and Protein glycosylation
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3030_Mixed,_incl._Tetratricopeptide_repeat,_and_Protein_glycosylation


id: CL:3033
description: Mixed, incl. Tetratricopeptide repeat, and Spermidine synthase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3033_Mixed,_incl._Tetratricopeptide_repeat,_and_Spermidine_synthase_activity


id: CL:3035
description: TPR repeat, and Spermidine synthase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3035_TPR_repeat,_and_Spermidine_synthase_activity


id: CL:3045
description: Mixed, incl. MalT-like TPR region, and Anti-sigma factor N-terminus
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3045_Mixed,_incl._MalT-like_TPR_region,_and_Anti-sigma_factor_N-terminus


id: CL:3080
description: Mixed, incl. SGNH hydrolase-type esterase domain, and Von Willebrand factor (vWF) type A domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3080_Mixed,_incl._SGNH_hydrolase-type_esterase_domain,_and_Von_Willebrand_factor_(vWF)_type_A_domain


id: CL:3100
description: Mixed, incl. Phosphodiester glycosidase, and Peptidase family M50
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3100_Mixed,_incl._Phosphodiester_glycosidase,_and_Peptidase_family_M50


id: CL:3111
description: Mostly uncharacterized, incl. NlpC/P60 family, and rRNA (adenine) methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3111_Mostly_uncharacterized,_incl._NlpC/P60_family,_and_rRNA_(adenine)_methyltransferase_activity


id: CL:3113
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3113_Mixed,_incl._rRNA_(adenine)_methyltransferase_activity,_and_Topoisomerases,_DnaG-type_primases,_OLD_family_nucleases_and_RecR_proteins

description:
  Mixed, incl. rRNA (adenine) methyltransferase activity, and Topoisomerases, DnaG-type primases, OLD family nucleases and RecR proteins


id: CL:3135
description: Mixed, incl. DUS-like, FMN-binding domain, and Putative zinc- or iron-chelating domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3135_Mixed,_incl._DUS-like,_FMN-binding_domain,_and_Putative_zinc-_or_iron-chelating_domain


id: CL:3149
description: Mixed, incl. Polysaccharide biosynthetic process, and Trimeric LpxA-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3149_Mixed,_incl._Polysaccharide_biosynthetic_process,_and_Trimeric_LpxA-like_superfamily


id: CL:3151
description: O-Antigen nucleotide sugar biosynthesis, and Lipopolysaccharide biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3151_O-Antigen_nucleotide_sugar_biosynthesis,_and_Lipopolysaccharide_biosynthesis


id: CL:3152
description: O-Antigen nucleotide sugar biosynthesis, and Glycosyl transferase family 4
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3152_O-Antigen_nucleotide_sugar_biosynthesis,_and_Glycosyl_transferase_family_4


id: CL:3154
description: O-Antigen nucleotide sugar biosynthesis, and Glycosyl transferase family 4
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3154_O-Antigen_nucleotide_sugar_biosynthesis,_and_Glycosyl_transferase_family_4


id: CL:3156
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3156_Mixed,_incl._DegT/DnrJ/EryC1/StrS_aminotransferase,_and_Homoserine_dehydrogenase,_NAD_binding_domain

description:
  Mixed, incl. DegT/DnrJ/EryC1/StrS aminotransferase, and Homoserine dehydrogenase, NAD binding domain


id: CL:3172
description: Mixed, incl. UDP binding domain, and Glycosyl transferase family 4
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3172_Mixed,_incl._UDP_binding_domain,_and_Glycosyl_transferase_family_4


id: CL:3189
description: Mixed, incl. Lipopolysaccharide biosynthesis, and CoA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3189_Mixed,_incl._Lipopolysaccharide_biosynthesis,_and_CoA-binding_domain


id: CL:3191
description: Glycosyltransferase like family 2, and CoA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3191_Glycosyltransferase_like_family_2,_and_CoA-binding_domain


id: CL:3209
description: Mixed, incl. Lipid-linked peptidoglycan transporter activity, and O-Antigen ligase
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3209_Mixed,_incl._Lipid-linked_peptidoglycan_transporter_activity,_and_O-Antigen_ligase


id: CL:321
description: Translocation, and SRP54-type protein, helical bundle domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:321_Translocation,_and_SRP54-type_protein,_helical_bundle_domain


id: CL:3227
description: Mixed, incl. Six-bladed beta-propeller, TolB-like, and ABC-2 type transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3227_Mixed,_incl._Six-bladed_beta-propeller,_TolB-like,_and_ABC-2_type_transporter


id: CL:3243
description: Mixed, incl. dUTP diphosphatase activity, and Phospholipase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3243_Mixed,_incl._dUTP_diphosphatase_activity,_and_Phospholipase_activity


id: CL:3259
description: Mixed, incl. Domain of unknown function DUF4234, and Protein of unknown function (DUF1292)
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3259_Mixed,_incl._Domain_of_unknown_function_DUF4234,_and_Protein_of_unknown_function_(DUF1292)


id: CL:3274
description: Mixed, incl. Cell differentiation, and Protein of unknown function DUF421
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3274_Mixed,_incl._Cell_differentiation,_and_Protein_of_unknown_function_DUF421


id: CL:3275
description: Mixed, incl. Cell differentiation, and Protein of unknown function DUF421
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3275_Mixed,_incl._Cell_differentiation,_and_Protein_of_unknown_function_DUF421


id: CL:3276
description: Mixed, incl. Cell differentiation, and Protein of unknown function DUF421
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3276_Mixed,_incl._Cell_differentiation,_and_Protein_of_unknown_function_DUF421


id: CL:3277
description: Mixed, incl. Cell differentiation, and Protein of unknown function DUF421
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3277_Mixed,_incl._Cell_differentiation,_and_Protein_of_unknown_function_DUF421


id: CL:3278
description: Mixed, incl. Cell differentiation, and Protein of unknown function DUF421
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3278_Mixed,_incl._Cell_differentiation,_and_Protein_of_unknown_function_DUF421


id: CL:3280
description: Sporulation, and Protein of unknown function DUF421
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3280_Sporulation,_and_Protein_of_unknown_function_DUF421


id: CL:3282
description: Sporulation, and Protein of unknown function DUF421
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3282_Sporulation,_and_Protein_of_unknown_function_DUF421


id: CL:3284
description: Sporulation, and Protein of unknown function DUF421
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3284_Sporulation,_and_Protein_of_unknown_function_DUF421


id: CL:3287
description: Sporulation, and Protein of unknown function DUF1657
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3287_Sporulation,_and_Protein_of_unknown_function_DUF1657


id: CL:3294
description: Mixed, incl. RNA polymerase sigma-70, and Sporulation
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3294_Mixed,_incl._RNA_polymerase_sigma-70,_and_Sporulation


id: CL:3295
description: Mixed, incl. RNA polymerase sigma-70, and Asexual sporulation
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3295_Mixed,_incl._RNA_polymerase_sigma-70,_and_Asexual_sporulation


id: CL:3306
description: Mixed, incl. Calcium, and PDZ domain 6
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3306_Mixed,_incl._Calcium,_and_PDZ_domain_6


id: CL:3320
description: Mixed, incl. SpoVA, and STAS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3320_Mixed,_incl._SpoVA,_and_STAS_domain


id: CL:3343
description: Protein of unknown function DUF1657, and SpoVA
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3343_Protein_of_unknown_function_DUF1657,_and_SpoVA


id: CL:3366
description: Mixed, incl. DNA catabolic process, and Stage III sporulation protein AC/AD family
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3366_Mixed,_incl._DNA_catabolic_process,_and_Stage_III_sporulation_protein_AC/AD_family


id: CL:3369
description: Stage III sporulation protein AC/AD family, and Sporulation
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3369_Stage_III_sporulation_protein_AC/AD_family,_and_Sporulation


id: CL:3385
description: Mixed, incl. DNA catabolic process, and NusB family
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3385_Mixed,_incl._DNA_catabolic_process,_and_NusB_family


id: CL:3412
description: Mixed, incl. Intracellular immature spore, and Peptidoglycan biosynthesis protein, SpoVB-type
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3412_Mixed,_incl._Intracellular_immature_spore,_and_Peptidoglycan_biosynthesis_protein,_SpoVB-type


id: CL:3414
description: Mixed, incl. Spore coat protein S-like, and Glycosyl transferases group 1
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3414_Mixed,_incl._Spore_coat_protein_S-like,_and_Glycosyl_transferases_group_1


id: CL:3416
description: Mixed, incl. Phenazine biosynthesis, and Protein of unknown function DUF2225
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3416_Mixed,_incl._Phenazine_biosynthesis,_and_Protein_of_unknown_function_DUF2225


id: CL:342
description: Mixed, incl. Ribosomal small subunit biogenesis, and UBA-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:342_Mixed,_incl._Ribosomal_small_subunit_biogenesis,_and_UBA-like_superfamily


id: CL:344
description: Mixed, incl. Ribosomal small subunit biogenesis, and tRNA pseudouridine synthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:344_Mixed,_incl._Ribosomal_small_subunit_biogenesis,_and_tRNA_pseudouridine_synthesis


id: CL:3443
description: Endospore-forming forespore, and Peptidoglycan biosynthesis protein, SpoVB-type
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3443_Endospore-forming_forespore,_and_Peptidoglycan_biosynthesis_protein,_SpoVB-type


id: CL:3455
description: Mixed, incl. Virion, and Putative amidase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3455_Mixed,_incl._Virion,_and_Putative_amidase_domain


id: CL:3457
description: Mixed, incl. Putative amidase domain, and MnmG, N-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3457_Mixed,_incl._Putative_amidase_domain,_and_MnmG,_N-terminal_domain


id: CL:3475
description: Mixed, incl. Cysteine desulfurase, and LSM domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3475_Mixed,_incl._Cysteine_desulfurase,_and_LSM_domain_superfamily


id: CL:3491
description: Mixed, incl. Heparin binding, and Quinone metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3491_Mixed,_incl._Heparin_binding,_and_Quinone_metabolic_process


id: CL:3500
description: Mixed, incl. Protein folding, and Membrane assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3500_Mixed,_incl._Protein_folding,_and_Membrane_assembly


id: CL:3501
description: Mostly uncharacterized, incl. Methyltransferase domain 25, and Unfolded protein binding
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3501_Mostly_uncharacterized,_incl._Methyltransferase_domain_25,_and_Unfolded_protein_binding


id: CL:3503
description: Mixed, incl. DNA replication, and ELP3/YhcC
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3503_Mixed,_incl._DNA_replication,_and_ELP3/YhcC


id: CL:3505
description: Mixed, incl. ELP3/YhcC, and DnaD domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3505_Mixed,_incl._ELP3/YhcC,_and_DnaD_domain


id: CL:3519
description: Mixed, incl. CorA, cytoplasmic domain, and DnaJ domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3519_Mixed,_incl._CorA,_cytoplasmic_domain,_and_DnaJ_domain


id: CL:3533
description: Methyltransferase domain 25, and SASP, alpha/beta-type superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3533_Methyltransferase_domain_25,_and_SASP,_alpha/beta-type_superfamily


id: CL:3542
description: Membrane assembly, and Peptidyl-prolyl cis-trans isomerase, PpiC-type
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3542_Membrane_assembly,_and_Peptidyl-prolyl_cis-trans_isomerase,_PpiC-type


id: CL:3551
description: Mixed, incl. Transcription, DNA-templated, and Extracellular region
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3551_Mixed,_incl._Transcription,_DNA-templated,_and_Extracellular_region


id: CL:3552
description: Mixed, incl. Transcription, DNA-templated, and NodB homology domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3552_Mixed,_incl._Transcription,_DNA-templated,_and_NodB_homology_domain


id: CL:3554
description: Mixed, incl. NodB homology domain, and Peptidase S8, subtilisin, Asp-active site
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3554_Mixed,_incl._NodB_homology_domain,_and_Peptidase_S8,_subtilisin,_Asp-active_site


id: CL:3555
description: Mixed, incl. Peptidase S8, subtilisin, Asp-active site, and Leucine-rich repeat domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3555_Mixed,_incl._Peptidase_S8,_subtilisin,_Asp-active_site,_and_Leucine-rich_repeat_domain_superfamily


id: CL:3556
description: Mixed, incl. Peptidase S8, subtilisin, Asp-active site, and Leucine-rich repeat domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3556_Mixed,_incl._Peptidase_S8,_subtilisin,_Asp-active_site,_and_Leucine-rich_repeat_domain_superfamily


id: CL:3557
description: Mixed, incl. CspA-like domain, and Leucine-rich repeat domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3557_Mixed,_incl._CspA-like_domain,_and_Leucine-rich_repeat_domain_superfamily


id: CL:3559
description: Mixed, incl. CspA-like domain, and Leucine rich repeat 4
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3559_Mixed,_incl._CspA-like_domain,_and_Leucine_rich_repeat_4


id: CL:356
description: Mixed, incl. UBA-like superfamily, and Prenyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:356_Mixed,_incl._UBA-like_superfamily,_and_Prenyltransferase_activity


id: CL:3560
description: Mixed, incl. Leucine rich repeat 4, and Csp protease B, prodomain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3560_Mixed,_incl._Leucine_rich_repeat_4,_and_Csp_protease_B,_prodomain


id: CL:3562
description: Leucine rich repeat 4, and Calcineurin-like phosphoesterase
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3562_Leucine_rich_repeat_4,_and_Calcineurin-like_phosphoesterase


id: CL:3579
description: CspA-like domain, and Peptidoglycan binding-like
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3579_CspA-like_domain,_and_Peptidoglycan_binding-like


id: CL:3581
description: Peptidase S8A, subtilisin-related, clostridia, and Csp protease B, prodomain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3581_Peptidase_S8A,_subtilisin-related,_clostridia,_and_Csp_protease_B,_prodomain


id: CL:3605
description: Mixed, incl. Domain of unknown function DUF255, and The BURPS668_1122 family of deaminases
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3605_Mixed,_incl._Domain_of_unknown_function_DUF255,_and_The__BURPS668_1122_family_of_deaminases


id: CL:3619
description: Mixed, incl. Ion channel, and LysM domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3619_Mixed,_incl._Ion_channel,_and_LysM_domain


id: CL:3636
description: Collagen, and SipL, SPOCS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3636_Collagen,_and_SipL,_SPOCS_domain


id: CL:3646
description: Mixed, incl. NodB homology domain, and Glycoside hydrolase, family 8
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3646_Mixed,_incl._NodB_homology_domain,_and_Glycoside_hydrolase,_family_8


id: CL:3648
description: Mixed, incl. NodB homology domain, and Glycoside hydrolase, family 8
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3648_Mixed,_incl._NodB_homology_domain,_and_Glycoside_hydrolase,_family_8


id: CL:3649
description: NodB homology domain, and Glycoside hydrolase, family 8
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3649_NodB_homology_domain,_and_Glycoside_hydrolase,_family_8


id: CL:3653
description: Glycoside hydrolase, family 8, and Tetratricopeptide repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3653_Glycoside_hydrolase,_family_8,_and_Tetratricopeptide_repeat


id: CL:3673
description: Mixed, incl. Glucosyltransferase activity, and Diguanylate cyclase, GGDEF domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3673_Mixed,_incl._Glucosyltransferase_activity,_and_Diguanylate_cyclase,_GGDEF_domain


id: CL:3701
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3701_Mixed,_incl._RNA_polymerase_sigma_factor_70,_region_4_type_2,_and_Domain_of_unknown_function_DUF4179

description:
  Mixed, incl. RNA polymerase sigma factor 70, region 4 type 2, and Domain of unknown function DUF4179


id: CL:3702
description: RNA polymerase sigma factor 70, region 4 type 2, and Domain of unknown function DUF4179
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3702_RNA_polymerase_sigma_factor_70,_region_4_type_2,_and_Domain_of_unknown_function_DUF4179


id: CL:3704
description: Domain of unknown function DUF4179, and RNA polymerase sigma-70 like
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3704_Domain_of_unknown_function_DUF4179,_and_RNA_polymerase_sigma-70_like


id: CL:3730
description: Mixed, incl. PdaC/RsiV-like superfamily, and Probable zinc-ribbon domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3730_Mixed,_incl._PdaC/RsiV-like_superfamily,_and_Probable_zinc-ribbon_domain


id: CL:3753
description: Mostly uncharacterized, incl. Cell killing, and Peptidase S51
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3753_Mostly_uncharacterized,_incl._Cell_killing,_and_Peptidase_S51


id: CL:3754
description: Mostly uncharacterized, incl. Cell killing, and tRNA 3-end processing
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3754_Mostly_uncharacterized,_incl._Cell_killing,_and_tRNA_3-end_processing


id: CL:3755
description: Mixed, incl. Cell killing, and tRNA 3-end processing
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3755_Mixed,_incl._Cell_killing,_and_tRNA_3-end_processing


id: CL:3757
description: Mixed, incl. Cell killing, and Pentapeptide repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3757_Mixed,_incl._Cell_killing,_and_Pentapeptide_repeat


id: CL:3760
description: Mixed, incl. Pentapeptide repeat, and Regulation of signaling
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3760_Mixed,_incl._Pentapeptide_repeat,_and_Regulation_of_signaling


id: CL:378
description: tRNA aminoacylation for protein translation
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:378_tRNA_aminoacylation_for_protein_translation


id: CL:3783
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3783_Mixed,_incl._Domain_of_unknown_function_DUF2179,_and_Calcineurin-like_phosphoesterase_domain,_ApaH_type

description:
  Mixed, incl. Domain of unknown function DUF2179, and Calcineurin-like phosphoesterase domain, ApaH type


id: CL:379
description: tRNA aminoacylation for protein translation
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:379_tRNA_aminoacylation_for_protein_translation


id: CL:3792
description: Mostly uncharacterized, incl. Peptidase S51, and ECF-type riboflavin transporter, S component
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3792_Mostly_uncharacterized,_incl._Peptidase_S51,_and_ECF-type_riboflavin_transporter,_S_component


id: CL:3793
description: Mixed, incl. Peptidase S51, and Integrase, catalytic core
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3793_Mixed,_incl._Peptidase_S51,_and_Integrase,_catalytic_core


id: CL:3804
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3804_Mixed,_incl._ECF-type_riboflavin_transporter,_S_component,_and_Pyruvate-formate_lyase-activating_enzyme,_predicted

description:
  Mixed, incl. ECF-type riboflavin transporter, S component, and Pyruvate-formate lyase-activating enzyme, predicted


id: CL:3815
description: Mixed, incl. Peptidase S51, and RNA phosphodiester bond hydrolysis, exonucleolytic
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3815_Mixed,_incl._Peptidase_S51,_and_RNA_phosphodiester_bond_hydrolysis,_exonucleolytic


id: CL:382
description: Aminoacyl-tRNA synthetase, class Ia, and Aminoacyl-tRNA editing domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:382_Aminoacyl-tRNA_synthetase,_class_Ia,_and_Aminoacyl-tRNA_editing_domain


id: CL:3824
description: Mixed, incl. Creatinase, N-terminal, and EamA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3824_Mixed,_incl._Creatinase,_N-terminal,_and_EamA_domain


id: CL:3825
description: Mixed, incl. Transglutaminase-like, and Conserved hypothetical protein 95
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3825_Mixed,_incl._Transglutaminase-like,_and_Conserved_hypothetical_protein_95


id: CL:3841
description: Creatinase, N-terminal, and Peptidase M13
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3841_Creatinase,_N-terminal,_and_Peptidase_M13


id: CL:3853
description: Mostly uncharacterized, incl. Helix-turn-helix XRE-family like proteins, and Peptidase M28
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3853_Mostly_uncharacterized,_incl._Helix-turn-helix_XRE-family_like_proteins,_and_Peptidase_M28


id: CL:3854
description: Mostly uncharacterized, incl. Peptidase M28, and Spore germination
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3854_Mostly_uncharacterized,_incl._Peptidase_M28,_and_Spore_germination


id: CL:3855
description: Mostly uncharacterized, incl. Peptidase M28, and Spore germination
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3855_Mostly_uncharacterized,_incl._Peptidase_M28,_and_Spore_germination


id: CL:3856
description: Mostly uncharacterized, incl. Spore germination, and NAD catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3856_Mostly_uncharacterized,_incl._Spore_germination,_and_NAD_catabolic_process


id: CL:3858
description: Mostly uncharacterized, incl. Spore germination, and NAD catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3858_Mostly_uncharacterized,_incl._Spore_germination,_and_NAD_catabolic_process


id: CL:3860
description: Mostly uncharacterized, incl. Major tropism determinant, N-terminal domain, and LysM domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3860_Mostly_uncharacterized,_incl._Major_tropism_determinant,_N-terminal_domain,_and_LysM_domain


id: CL:3862
description: Mostly uncharacterized, incl. LysM domain, and Viral process
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3862_Mostly_uncharacterized,_incl._LysM_domain,_and_Viral_process


id: CL:3896
description: Mixed, incl. Spore germination, and NAD catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3896_Mixed,_incl._Spore_germination,_and_NAD_catabolic_process


id: CL:3899
description: Mixed, incl. Spore germination, and NAD catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3899_Mixed,_incl._Spore_germination,_and_NAD_catabolic_process


id: CL:3902
description: Protein of unknown function DUF2334, and Sigma-70, region 4
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3902_Protein_of_unknown_function_DUF2334,_and_Sigma-70,_region_4


id: CL:3936
description: Mixed, incl. Protein of unknown function DUF3791, and Protein of unknown function DUF3990
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3936_Mixed,_incl._Protein_of_unknown_function_DUF3791,_and_Protein_of_unknown_function_DUF3990


id: CL:3945
description: Mixed, incl. Peptidase M28, and CHAP domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3945_Mixed,_incl._Peptidase_M28,_and_CHAP_domain


id: CL:3959
description: Mixed, incl. Acid-thiol ligase activity, and Cupin domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3959_Mixed,_incl._Acid-thiol_ligase_activity,_and_Cupin_domain


id: CL:3973
description: Mixed, incl. Helix-turn-helix XRE-family like proteins, and IrrE N-terminal-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3973_Mixed,_incl._Helix-turn-helix_XRE-family_like_proteins,_and_IrrE_N-terminal-like_domain


id: CL:3975
description: IrrE N-terminal-like domain, and Helix-turn-helix XRE-family like proteins
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3975_IrrE_N-terminal-like_domain,_and_Helix-turn-helix_XRE-family_like_proteins


id: CL:3988
description: Mixed, incl. Helix-turn-helix XRE-family like proteins, and S-adenosyl-L-methionine
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:3988_Mixed,_incl._Helix-turn-helix_XRE-family_like_proteins,_and_S-adenosyl-L-methionine


id: CL:400
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:400_tRNA_synthetase_class_II_core_domain_(G,_H,_P,_S_and_T),_and_Aspartyl/Asparaginyl-tRNA_synthetase,_class_IIb

description:
  tRNA synthetase class II core domain (G, H, P, S and T), and Aspartyl/Asparaginyl-tRNA synthetase, class IIb


id: CL:4002
description: Mixed, incl. ABC transporters, and DNA-binding transcription factor activity
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4002_Mixed,_incl._ABC_transporters,_and_DNA-binding_transcription_factor_activity


id: CL:4003
description: Mixed, incl. ABC transporters, and LysR, substrate-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4003_Mixed,_incl._ABC_transporters,_and_LysR,_substrate-binding


id: CL:4004
description: Mixed, incl. ABC transporters, and LysR, substrate-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4004_Mixed,_incl._ABC_transporters,_and_LysR,_substrate-binding


id: CL:4005
description: ABC transporters, and LysR, substrate-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4005_ABC_transporters,_and_LysR,_substrate-binding


id: CL:4006
description: Mixed, incl. ABC transporter-like, ATP-binding domain, and ABC-2 family transporter protein
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4006_Mixed,_incl._ABC_transporter-like,_ATP-binding_domain,_and_ABC-2_family_transporter_protein


id: CL:4008
description: Mixed, incl. ABC transporter-like, ATP-binding domain, and ABC-2 family transporter protein
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4008_Mixed,_incl._ABC_transporter-like,_ATP-binding_domain,_and_ABC-2_family_transporter_protein


id: CL:4009
description: Mixed, incl. ABC-2 family transporter protein, and ABC transporter-like, ATP-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4009_Mixed,_incl._ABC-2_family_transporter_protein,_and_ABC_transporter-like,_ATP-binding_domain


id: CL:4010
description: Mixed, incl. ABC-2 family transporter protein, and ABC transporter-like, ATP-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4010_Mixed,_incl._ABC-2_family_transporter_protein,_and_ABC_transporter-like,_ATP-binding_domain


id: CL:4011
description: Mixed, incl. ABC-2 family transporter protein, and Phage infection protein, YhgE, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4011_Mixed,_incl._ABC-2_family_transporter_protein,_and_Phage_infection_protein,_YhgE,_C-terminal


id: CL:4013
description: Mixed, incl. ABC-2 family transporter protein, and Transcription regulator HTH, GntR
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4013_Mixed,_incl._ABC-2_family_transporter_protein,_and_Transcription_regulator_HTH,_GntR


id: CL:4015
description: ABC-2 family transporter protein, and Periplasmic space
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4015_ABC-2_family_transporter_protein,_and_Periplasmic_space


id: CL:4040
description: ABC-2 family transporter protein, and Gallidermin ABC transporter, ATP-binding subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4040_ABC-2_family_transporter_protein,_and_Gallidermin_ABC_transporter,_ATP-binding_subunit


id: CL:4042
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4042_Mixed,_incl._Gallidermin_ABC_transporter,_ATP-binding_subunit,_and_Lantibiotic_ABC_transporter_permease_subunit,_SpaE/MutE

description:
  Mixed, incl. Gallidermin ABC transporter, ATP-binding subunit, and Lantibiotic ABC transporter permease subunit, SpaE/MutE


id: CL:4062
description: Mixed, incl. Regulation of signaling, and Aminoacyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4062_Mixed,_incl._Regulation_of_signaling,_and_Aminoacyltransferase_activity


id: CL:4073
description: Mixed, incl. ABC-2 membrane transporter-like, and SpoVT / AbrB like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4073_Mixed,_incl._ABC-2_membrane_transporter-like,_and_SpoVT_/_AbrB_like_domain


id: CL:4086
description: Mixed, incl. Transcription regulator HTH, GntR, and ABC transporter-like, ATP-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4086_Mixed,_incl._Transcription_regulator_HTH,_GntR,_and_ABC_transporter-like,_ATP-binding_domain


id: CL:4109
description: Mixed, incl. LysR, substrate-binding, and Bacterial extracellular solute-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4109_Mixed,_incl._LysR,_substrate-binding,_and_Bacterial_extracellular_solute-binding_protein


id: CL:4110
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4110_Bacterial_extracellular_solute-binding_protein,_and_Binding-protein-dependent_transport_system_inner_membrane_component

description:
  Bacterial extracellular solute-binding protein, and Binding-protein-dependent transport system inner membrane component


id: CL:4112
description: Polyamine transport, and ABC-type polyamine transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4112_Polyamine_transport,_and_ABC-type_polyamine_transporter_activity


id: CL:4129
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4129_Mixed,_incl._ABC-type_maltose_transporter_activity,_and_Bacterial_extracellular_solute-binding_protein

description:
  Mixed, incl. ABC-type maltose transporter activity, and Bacterial extracellular solute-binding protein


id: CL:4158
description: Mixed, incl. ABC3 transporter permease protein domain, and MacB, ATP-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4158_Mixed,_incl._ABC3_transporter_permease_protein_domain,_and_MacB,_ATP-binding_domain


id: CL:4159
description: Mixed, incl. ABC3 transporter permease protein domain, and MacB, ATP-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4159_Mixed,_incl._ABC3_transporter_permease_protein_domain,_and_MacB,_ATP-binding_domain


id: CL:4160
description: Mixed, incl. FtsX-like permease family, and MacB, ATP-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4160_Mixed,_incl._FtsX-like_permease_family,_and_MacB,_ATP-binding_domain


id: CL:4161
description: FtsX-like permease family, and MacB, ATP-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4161_FtsX-like_permease_family,_and_MacB,_ATP-binding_domain


id: CL:4163
description: ABC transporter permease protein, BceB-type, and MacB, ATP-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4163_ABC_transporter_permease_protein,_BceB-type,_and_MacB,_ATP-binding_domain


id: CL:4181
description: Lipoprotein transport, and FtsX-like permease family
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4181_Lipoprotein_transport,_and_FtsX-like_permease_family


id: CL:4190
description: Mixed, incl. Biotin-lipoyl like, and Efflux transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4190_Mixed,_incl._Biotin-lipoyl_like,_and_Efflux_transmembrane_transporter_activity


id: CL:4192
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4192_Mixed,_incl._MacB-like_periplasmic_core_domain,_and_RND_efflux_pump,_membrane_fusion_protein,_barrel-sandwich_domain

description:
  Mixed, incl. MacB-like periplasmic core domain, and RND efflux pump, membrane fusion protein, barrel-sandwich domain


id: CL:4208
description: Biotin-lipoyl like, and Drug resistance transporter EmrB-like
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4208_Biotin-lipoyl_like,_and_Drug_resistance_transporter_EmrB-like


id: CL:4218
description: Mixed, incl. ABC transporter-like, conserved site, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4218_Mixed,_incl._ABC_transporter-like,_conserved_site,_and_Signal


id: CL:422
description: Proton-transporting ATP synthase complex, and Inorganic diphosphatase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:422_Proton-transporting_ATP_synthase_complex,_and_Inorganic_diphosphatase_activity


id: CL:4234
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4234_Bacterial_periplasmic_substrate-binding_proteins,_and_Amino_acid_ABC_transporter,_permease_protein,_3-TM_domain

description:
  Bacterial periplasmic substrate-binding proteins, and Amino acid ABC transporter, permease protein, 3-TM domain


id: CL:4235
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4235_Bacterial_periplasmic_substrate-binding_proteins,_and_Amino_acid_ABC_transporter,_permease_protein,_3-TM_domain

description:
  Bacterial periplasmic substrate-binding proteins, and Amino acid ABC transporter, permease protein, 3-TM domain


id: CL:4237
description: Ligand-gated channel activity, and Amino acid ABC transporter, permease protein, 3-TM domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4237_Ligand-gated_channel_activity,_and_Amino_acid_ABC_transporter,_permease_protein,_3-TM_domain


id: CL:425
description: Proton-transporting ATP synthase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:425_Proton-transporting_ATP_synthase_complex


id: CL:4256
description: Ligand-gated channel activity, and Amino acid ABC transporter, permease protein, 3-TM domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4256_Ligand-gated_channel_activity,_and_Amino_acid_ABC_transporter,_permease_protein,_3-TM_domain


id: CL:4269
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4269_Mixed,_incl._Latent_infection_-_Other_responses_of_Mtb_to_phagocytosis,_and_Oligopeptide/dipeptide_ABC_transporter,_C-terminal

description:
  Mixed, incl. Latent infection - Other responses of Mtb to phagocytosis, and Oligopeptide/dipeptide ABC transporter, C-terminal


id: CL:4270
description: Mixed, incl. Solute-binding protein family 5, and Nickel cation transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4270_Mixed,_incl._Solute-binding_protein_family_5,_and_Nickel_cation_transmembrane_transporter_activity


id: CL:4272
description: Solute-binding protein family 5, and Nickel cation transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4272_Solute-binding_protein_family_5,_and_Nickel_cation_transmembrane_transporter_activity


id: CL:4275
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4275_Nickel_cation_transmembrane_transporter_activity,_and_Oligopeptide/dipeptide_ABC_transporter,_C-terminal

description:
  Nickel cation transmembrane transporter activity, and Oligopeptide/dipeptide ABC transporter, C-terminal


id: CL:4286
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4286_Oligopeptide/dipeptide_transporter,_C-terminal_region,_and_Nickel_cation_transmembrane_transporter_activity

description:
  Oligopeptide/dipeptide transporter, C-terminal region, and Nickel cation transmembrane transporter activity


id: CL:4303
description: Type 1 protein exporter, and Peptidase S26
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4303_Type_1_protein_exporter,_and_Peptidase_S26


id: CL:4304
description: Type 1 protein exporter, and Peptidase S26
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4304_Type_1_protein_exporter,_and_Peptidase_S26


id: CL:4325
description: Type 1 protein exporter, and MarR-type HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4325_Type_1_protein_exporter,_and_MarR-type_HTH_domain


id: CL:4334
description: Mixed, incl. Metal ion transport, and CobW/HypB/UreG, nucleotide-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4334_Mixed,_incl._Metal_ion_transport,_and_CobW/HypB/UreG,_nucleotide-binding_domain


id: CL:4335
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4335_Mixed,_incl._CobW/HypB/UreG,_nucleotide-binding_domain,_and_Zinc-uptake_complex_component_A_periplasmic

description:
  Mixed, incl. CobW/HypB/UreG, nucleotide-binding domain, and Zinc-uptake complex component A periplasmic


id: CL:4336
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4336_Mixed,_incl._CobW/HypB/UreG,_nucleotide-binding_domain,_and_Zinc-uptake_complex_component_A_periplasmic

description:
  Mixed, incl. CobW/HypB/UreG, nucleotide-binding domain, and Zinc-uptake complex component A periplasmic


id: CL:4338
description: Mixed, incl. Zinc-uptake complex component A periplasmic, and DTXR-type HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4338_Mixed,_incl._Zinc-uptake_complex_component_A_periplasmic,_and_DTXR-type_HTH_domain


id: CL:4361
description: Mixed, incl. Oligopeptidase F, and Manganese ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4361_Mixed,_incl._Oligopeptidase_F,_and_Manganese_ion_transport


id: CL:4370
description: Mixed, incl. Magnesium ion transport, and NRAMP family
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4370_Mixed,_incl._Magnesium_ion_transport,_and_NRAMP_family


id: CL:4383
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4383_Mostly_uncharacterized,_incl._Helix_turn_helix_multiple_antibiotic_resistance_protein,_and_Pteridine-containing_compound_biosynthetic_process

description:
  Mostly uncharacterized, incl. Helix_turn_helix multiple antibiotic resistance protein, and Pteridine-containing compound biosynthetic process


id: CL:4384
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4384_Mostly_uncharacterized,_incl._Pteridine-containing_compound_biosynthetic_process,_and_TfoX,_C-terminal

description:
  Mostly uncharacterized, incl. Pteridine-containing compound biosynthetic process, and TfoX, C-terminal


id: CL:4385
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4385_Mostly_uncharacterized,_incl._Pteridine-containing_compound_biosynthetic_process,_and_TfoX,_C-terminal

description:
  Mostly uncharacterized, incl. Pteridine-containing compound biosynthetic process, and TfoX, C-terminal


id: CL:4386
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4386_Mostly_uncharacterized,_incl._Pteridine-containing_compound_biosynthetic_process,_and_TfoX,_C-terminal

description:
  Mostly uncharacterized, incl. Pteridine-containing compound biosynthetic process, and TfoX, C-terminal


id: CL:4388
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4388_Mostly_uncharacterized,_incl._Pteridine-containing_compound_biosynthetic_process,_and_TfoX,_C-terminal

description:
[cell repeats an earlier one in this file: 102 characters]


id: CL:4389
description: Mostly uncharacterized, incl. TfoX, C-terminal, and Armadillo-like helical
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4389_Mostly_uncharacterized,_incl._TfoX,_C-terminal,_and_Armadillo-like_helical


id: CL:4391
description: Mostly uncharacterized, incl. TfoX, C-terminal, and Glyoxalase-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4391_Mostly_uncharacterized,_incl._TfoX,_C-terminal,_and_Glyoxalase-like_domain


id: CL:4394
description: Mixed, incl. Glyoxalase-like domain, and Transcription regulator PadR, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4394_Mixed,_incl._Glyoxalase-like_domain,_and_Transcription_regulator_PadR,_N-terminal


id: CL:4411
description: Mixed, incl. MacB-like periplasmic core domain, and ABC transporter, lipoprotein release, LolD-like
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4411_Mixed,_incl._MacB-like_periplasmic_core_domain,_and_ABC_transporter,_lipoprotein_release,_LolD-like


id: CL:4432
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4432_Mixed,_incl._Methanocaldococcus_jannaschii_dihydropteroate_synthase-like,_MBL-fold_metallo_hydrolase_domain,_and_MalT-like_TPR_region

description:
  Mixed, incl. Methanocaldococcus jannaschii dihydropteroate synthase-like, MBL-fold metallo hydrolase domain, and MalT-like TPR region


id: CL:4453
description: Mixed, incl. NTF2-like domain superfamily, and Cellular response to pH
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4453_Mixed,_incl._NTF2-like_domain_superfamily,_and_Cellular_response_to_pH


id: CL:4462
description: Mixed, incl. Acetyltransferase (GNAT) domain, and Helix-turn-helix XRE-family like proteins
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4462_Mixed,_incl._Acetyltransferase_(GNAT)_domain,_and_Helix-turn-helix_XRE-family_like_proteins


id: CL:4472
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4472_Mixed,_incl._Glycine_betaine_transport,_and_ABC-type_glycine_betaine_transport_system,_substrate-binding_domain

description:
  Mixed, incl. Glycine betaine transport, and ABC-type glycine betaine transport system, substrate-binding domain


id: CL:4475
description: Glycine betaine transport, and ABC-type glycine betaine transport system, substrate-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4475_Glycine_betaine_transport,_and_ABC-type_glycine_betaine_transport_system,_substrate-binding_domain


id: CL:4510
description: Bacterial chemotaxis, and Cilium
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4510_Bacterial_chemotaxis,_and_Cilium


id: CL:4543
description: Mixed, incl. CheW-like domain, and Protein-glutamine glutaminase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4543_Mixed,_incl._CheW-like_domain,_and_Protein-glutamine_glutaminase_activity


id: CL:4544
description: Mixed, incl. CheW-like domain, and Protein-glutamine glutaminase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4544_Mixed,_incl._CheW-like_domain,_and_Protein-glutamine_glutaminase_activity


id: CL:4546
description: CheW-like domain, and Demethylation
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4546_CheW-like_domain,_and_Demethylation


id: CL:456
description: Mixed, incl. RNA helicase, DEAD-box type, Q motif, and 3 exoribonuclease family, domain 1
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:456_Mixed,_incl._RNA_helicase,_DEAD-box_type,_Q_motif,_and_3_exoribonuclease_family,_domain_1


id: CL:4563
description: CheW-like domain, and Demethylation
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4563_CheW-like_domain,_and_Demethylation


id: CL:458
description: RNA helicase, DEAD-box type, Q motif, and K Homology domain, type 1
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:458_RNA_helicase,_DEAD-box_type,_Q_motif,_and_K_Homology_domain,_type_1


id: CL:4627
description: Bacterial-type flagellum basal body, and Bacterial-type flagellum organization
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4627_Bacterial-type_flagellum_basal_body,_and_Bacterial-type_flagellum_organization


id: CL:4629
description: Bacterial-type flagellum basal body, and Bacterial flagellum biogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4629_Bacterial-type_flagellum_basal_body,_and_Bacterial_flagellum_biogenesis


id: CL:4630
description: Bacterial-type flagellum basal body, and Bacterial flagellum biogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4630_Bacterial-type_flagellum_basal_body,_and_Bacterial_flagellum_biogenesis


id: CL:4632
description: Flagella basal body rod protein, and Bacterial flagellum biogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4632_Flagella_basal_body_rod_protein,_and_Bacterial_flagellum_biogenesis


id: CL:4645
description: Cytoskeletal motor activity, and FlhB HrpN YscU SpaS Family
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4645_Cytoskeletal_motor_activity,_and_FlhB_HrpN_YscU_SpaS_Family


id: CL:4655
description: Bacterial-type flagellum basal body
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4655_Bacterial-type_flagellum_basal_body


id: CL:4684
description: Bacterial-type flagellum hook, and Flagellin, C-terminal domain, subdomain 2
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4684_Bacterial-type_flagellum_hook,_and_Flagellin,_C-terminal_domain,_subdomain_2


id: CL:4711
description: Phosphorelay signal transduction system, and GGDEF domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4711_Phosphorelay_signal_transduction_system,_and_GGDEF_domain


id: CL:4713
description: Two-component regulatory system, and His Kinase A (phosphoacceptor) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4713_Two-component_regulatory_system,_and_His_Kinase_A_(phosphoacceptor)_domain


id: CL:4715
description: Two-component regulatory system, and His Kinase A (phosphoacceptor) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4715_Two-component_regulatory_system,_and_His_Kinase_A_(phosphoacceptor)_domain


id: CL:4718
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4718_Two-component_regulatory_system,_and_Signal_transduction_histidine_kinase,_dimerisation/phosphoacceptor_domain

description:
  Two-component regulatory system, and Signal transduction histidine kinase, dimerisation/phosphoacceptor domain


id: CL:4719
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4719_Signal_transduction_histidine_kinase-related_protein,_C-terminal,_and_OmpR/PhoB-type_DNA-binding_domain

description:
  Signal transduction histidine kinase-related protein, C-terminal, and OmpR/PhoB-type DNA-binding domain


id: CL:472
description: Exoribonuclease activity, and NUDIX hydrolase, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:472_Exoribonuclease_activity,_and_NUDIX_hydrolase,_conserved_site


id: CL:4721
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4721_Signal_transduction_histidine_kinase-related_protein,_C-terminal,_and_cheY-homologous_receiver_domain

description:
  Signal transduction histidine kinase-related protein, C-terminal, and cheY-homologous receiver domain


id: CL:4723
description: PAS domain, and Two-component regulatory system
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4723_PAS_domain,_and_Two-component_regulatory_system


id: CL:4763
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4763_Signal_transduction_histidine_kinase/phosphatase,_lantibiotic_regulatory_protein_MprB,_and_OmpR/PhoB-type_DNA-binding_domain

description:
  Signal transduction histidine kinase/phosphatase, lantibiotic regulatory protein MprB, and OmpR/PhoB-type DNA-binding domain


id: CL:4820
description: EAL domain superfamily, and PAS fold-3
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4820_EAL_domain_superfamily,_and_PAS_fold-3


id: CL:4862
description: Mixed, incl. DNA binding HTH domain, AraC-type, and Histidine kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4862_Mixed,_incl._DNA_binding_HTH_domain,_AraC-type,_and_Histidine_kinase


id: CL:4864
description: DNA binding HTH domain, AraC-type, and Histidine kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4864_DNA_binding_HTH_domain,_AraC-type,_and_Histidine_kinase


id: CL:4866
description: Histidine kinase, and HTH domain AraC-type, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4866_Histidine_kinase,_and_HTH_domain_AraC-type,_conserved_site


id: CL:4885
description: Transcription regulator HTH-like, and Acetyltransferase (GNAT) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4885_Transcription_regulator_HTH-like,_and_Acetyltransferase_(GNAT)_domain


id: CL:4922
description: Mixed, incl. Sulfur metabolism, and Iron ion binding
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4922_Mixed,_incl._Sulfur_metabolism,_and_Iron_ion_binding


id: CL:4923
description: Mixed, incl. Iron ion binding, and Sulfur metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4923_Mixed,_incl._Iron_ion_binding,_and_Sulfur_metabolism


id: CL:4924
description: Mixed, incl. Sulfur metabolism, and Cell death
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4924_Mixed,_incl._Sulfur_metabolism,_and_Cell_death


id: CL:4947
description: Mixed, incl. Gas transport, and Nitrate assimilation
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4947_Mixed,_incl._Gas_transport,_and_Nitrate_assimilation


id: CL:4949
description: Electron transport, and Nitrate assimilation
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4949_Electron_transport,_and_Nitrate_assimilation


id: CL:4969
description: Mixed, incl. Flavodoxin/nitric oxide synthase, and Phosphoenolpyruvate carboxykinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4969_Mixed,_incl._Flavodoxin/nitric_oxide_synthase,_and_Phosphoenolpyruvate_carboxykinase_activity


id: CL:4982
description: Mixed, incl. Horizontal gene transfer, and Bacterial secretion system
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4982_Mixed,_incl._Horizontal_gene_transfer,_and_Bacterial_secretion_system


id: CL:4983
description: Mixed, incl. Horizontal gene transfer, and Bacterial secretion system
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4983_Mixed,_incl._Horizontal_gene_transfer,_and_Bacterial_secretion_system


id: CL:4984
description: Mixed, incl. Horizontal gene transfer, and Bacterial secretion system
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4984_Mixed,_incl._Horizontal_gene_transfer,_and_Bacterial_secretion_system


id: CL:4985
description: Mixed, incl. Protein transport across the cell outer membrane, and Pilus organization
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4985_Mixed,_incl._Protein_transport_across_the_cell_outer_membrane,_and_Pilus_organization


id: CL:4986
description: Mixed, incl. Protein transport across the cell outer membrane, and GspF/PilC family
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4986_Mixed,_incl._Protein_transport_across_the_cell_outer_membrane,_and_GspF/PilC_family


id: CL:4989
description: Protein transport across the cell outer membrane, and GspF/PilC family
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:4989_Protein_transport_across_the_cell_outer_membrane,_and_GspF/PilC_family


id: CL:5012
description: Mixed, incl. Pilus assembly, and Photosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5012_Mixed,_incl._Pilus_assembly,_and_Photosynthesis


id: CL:5024
description: Horizontal gene transfer, and Subunit ChlI of Mg-chelatase
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5024_Horizontal_gene_transfer,_and_Subunit_ChlI_of_Mg-chelatase


id: CL:5033
description: CAP domain, and ComA-like, MBL domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5033_CAP_domain,_and_ComA-like,_MBL_domain


id: CL:5045
description: Pilin-like, and Transmembrane helix
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5045_Pilin-like,_and_Transmembrane_helix


id: CL:5065
description: Mixed, incl. ATPase-coupled cation transmembrane transporter activity, and Chloride transport
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5065_Mixed,_incl._ATPase-coupled_cation_transmembrane_transporter_activity,_and_Chloride_transport


id: CL:5067
description: ATPase-coupled cation transmembrane transporter activity, and MgtC family
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5067_ATPase-coupled_cation_transmembrane_transporter_activity,_and_MgtC_family


id: CL:5070
description: ATPase-coupled ion transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5070_ATPase-coupled_ion_transmembrane_transporter_activity


id: CL:5089
description: Cation transporting ATPase, C-terminus, and MgtC family
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5089_Cation_transporting_ATPase,_C-terminus,_and_MgtC_family


id: CL:5101
description: Mixed, incl. Potassium ion transport, and UspA
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5101_Mixed,_incl._Potassium_ion_transport,_and_UspA


id: CL:5103
description: Potassium ion transport, and UspA
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5103_Potassium_ion_transport,_and_UspA


id: CL:5139
description: Mixed, incl. Heavy-metal-associated domain, and HTH ArsR-type DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5139_Mixed,_incl._Heavy-metal-associated_domain,_and_HTH_ArsR-type_DNA-binding_domain


id: CL:5141
description: Mixed, incl. Heavy-metal-associated domain, and HTH ArsR-type DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5141_Mixed,_incl._Heavy-metal-associated_domain,_and_HTH_ArsR-type_DNA-binding_domain


id: CL:5142
description: Mixed, incl. Heavy-metal-associated domain, and Peptidase M56
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5142_Mixed,_incl._Heavy-metal-associated_domain,_and_Peptidase_M56


id: CL:5145
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5145_Heavy-metal-associated,_conserved_site,_and_ATPase-coupled_cation_transmembrane_transporter_activity

description:
  Heavy-metal-associated, conserved site, and ATPase-coupled cation transmembrane transporter activity


id: CL:5163
description: Peptidase M56, and Penicillinase repressor
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5163_Peptidase_M56,_and_Penicillinase_repressor


id: CL:5178
description: HTH ArsR-type DNA-binding domain, and Response to arsenic-containing substance
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5178_HTH_ArsR-type_DNA-binding_domain,_and_Response_to_arsenic-containing_substance


id: CL:5199
description: Ferrous iron transporter FeoA domain, and Iron transport
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5199_Ferrous_iron_transporter_FeoA_domain,_and_Iron_transport


id: CL:5214
description: Mixed, incl. Branched-chain amino acid transport, and Leucine-binding protein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5214_Mixed,_incl._Branched-chain_amino_acid_transport,_and_Leucine-binding_protein_domain


id: CL:5216
description: Mixed, incl. Branched-chain amino acid transport, and Leucine-binding protein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5216_Mixed,_incl._Branched-chain_amino_acid_transport,_and_Leucine-binding_protein_domain


id: CL:5219
description: Branched-chain amino acid transport, and Leucine-binding protein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5219_Branched-chain_amino_acid_transport,_and_Leucine-binding_protein_domain


id: CL:5220
description: Branched-chain amino acid transport, and Leucine-binding protein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5220_Branched-chain_amino_acid_transport,_and_Leucine-binding_protein_domain


id: CL:5229
description: Branched-chain amino acid transport, and Leucine-binding protein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5229_Branched-chain_amino_acid_transport,_and_Leucine-binding_protein_domain


id: CL:5256
description: Mixed, incl. Phosphoesterase MJ0912, and Protein of unknown function DUF3795
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5256_Mixed,_incl._Phosphoesterase_MJ0912,_and_Protein_of_unknown_function_DUF3795


id: CL:5265
description: Mixed, incl. Alditol metabolic process, and HxlR-like helix-turn-helix
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5265_Mixed,_incl._Alditol_metabolic_process,_and_HxlR-like_helix-turn-helix


id: CL:5266
description: Mixed, incl. Alditol metabolic process, and HxlR-like helix-turn-helix
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5266_Mixed,_incl._Alditol_metabolic_process,_and_HxlR-like_helix-turn-helix


id: CL:5268
description: Mixed, incl. Alditol metabolic process, and ABC transporter, permease
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5268_Mixed,_incl._Alditol_metabolic_process,_and_ABC_transporter,_permease


id: CL:5269
description: Mixed, incl. DegV, and Fatty acid kinase subunit A-like, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5269_Mixed,_incl._DegV,_and_Fatty_acid_kinase_subunit_A-like,_C-terminal


id: CL:5271
description: DegV, and Fatty acid kinase subunit A-like, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5271_DegV,_and_Fatty_acid_kinase_subunit_A-like,_C-terminal


id: CL:5285
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5285_Mixed,_incl._ATP-dependent_DNA_helicase_RecG/Transcription-repair-coupling_factor,_and_Coenzyme_A_biosynthesis

description:
  Mixed, incl. ATP-dependent DNA helicase RecG/Transcription-repair-coupling factor, and Coenzyme A biosynthesis


id: CL:529
description: Mixed, incl. Ribonuclease J, and LSM domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:529_Mixed,_incl._Ribonuclease_J,_and_LSM_domain_superfamily


id: CL:5296
description: Mixed, incl. ABC transporter, permease, and ABC transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5296_Mixed,_incl._ABC_transporter,_permease,_and_ABC_transporter


id: CL:5310
description: Mixed, incl. HxlR-like helix-turn-helix, and Alanine racemase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5310_Mixed,_incl._HxlR-like_helix-turn-helix,_and_Alanine_racemase_activity


id: CL:5312
description: HxlR-like helix-turn-helix, and Alanine racemase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5312_HxlR-like_helix-turn-helix,_and_Alanine_racemase_activity


id: CL:5331
description: Mixed, incl. VanW like protein, and Threonine/Serine exporter, ThrE
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5331_Mixed,_incl._VanW_like_protein,_and_Threonine/Serine_exporter,_ThrE


id: CL:5333
description: Mixed, incl. Dicarboxylic acid catabolic process, and Nitrogen regulatory PII-like, alpha/beta
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5333_Mixed,_incl._Dicarboxylic_acid_catabolic_process,_and_Nitrogen_regulatory_PII-like,_alpha/beta


id: CL:5345
description: VanW like protein, and M42 glutamyl aminopeptidase
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5345_VanW_like_protein,_and_M42_glutamyl_aminopeptidase


id: CL:5354
description: Mixed, incl. Tetrapyrrole biosynthetic process, and ABC transporters
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5354_Mixed,_incl._Tetrapyrrole_biosynthetic_process,_and_ABC_transporters


id: CL:5355
description: Mixed, incl. Tetrapyrrole biosynthetic process, and Transition metal ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5355_Mixed,_incl._Tetrapyrrole_biosynthetic_process,_and_Transition_metal_ion_transport


id: CL:5356
description: Mixed, incl. Tetrapyrrole biosynthetic process, and Transition metal ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5356_Mixed,_incl._Tetrapyrrole_biosynthetic_process,_and_Transition_metal_ion_transport


id: CL:5358
description: Tetrapyrrole biosynthetic process, and ABC transporter, CbiO/EcfA subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5358_Tetrapyrrole_biosynthetic_process,_and_ABC_transporter,_CbiO/EcfA_subunit


id: CL:5359
description: Tetrapyrrole biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5359_Tetrapyrrole_biosynthetic_process


id: CL:5384
description: Mixed, incl. Cobalamin transport, and Guanylyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5384_Mixed,_incl._Cobalamin_transport,_and_Guanylyltransferase_activity


id: CL:540
description: Mixed, incl. RF-1 domain, and Zinc ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:540_Mixed,_incl._RF-1_domain,_and_Zinc_ion_transport


id: CL:5413
description: Cobalt ion transport, and ABC transporter, CbiO/EcfA subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5413_Cobalt_ion_transport,_and_ABC_transporter,_CbiO/EcfA_subunit


id: CL:5414
description: Cobalt ion transport, and Cobalt ECF transporter T component CbiQ
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5414_Cobalt_ion_transport,_and_Cobalt_ECF_transporter_T_component_CbiQ


id: CL:5427
description: ABC transporter, CbiO/EcfA subunit, and Cobalt transport protein
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5427_ABC_transporter,_CbiO/EcfA_subunit,_and_Cobalt_transport_protein


id: CL:5440
description: Mixed, incl. Heme transport, and ABC transporter, permease protein, BtuC-like
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5440_Mixed,_incl._Heme_transport,_and_ABC_transporter,_permease_protein,_BtuC-like


id: CL:5441
description: Heme transport, and ABC transporter, permease protein, BtuC-like
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5441_Heme_transport,_and_ABC_transporter,_permease_protein,_BtuC-like


id: CL:5443
description: Heme transport, and ABC transporter, permease protein, BtuC-like
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5443_Heme_transport,_and_ABC_transporter,_permease_protein,_BtuC-like


id: CL:5464
description: [FeFe]-hydrogenase system regulator TM1266, and Biotin and thiamin synthesis-associated domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5464_[FeFe]-hydrogenase_system_regulator_TM1266,_and_Biotin_and_thiamin_synthesis-associated_domain


id: CL:5474
description: Mixed, incl. ECF transporter, substrate-specific component, and Membrane raft
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5474_Mixed,_incl._ECF_transporter,_substrate-specific_component,_and_Membrane_raft


id: CL:5476
description: Mixed, incl. ECF transporter, substrate-specific component, and ArgJ-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5476_Mixed,_incl._ECF_transporter,_substrate-specific_component,_and_ArgJ-like_domain_superfamily


id: CL:5502
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5502_Mixed,_incl._Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_NAD_or_NADP_as_acceptor,_and_Fermentation

description:
  Mixed, incl. Oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor, and Fermentation


id: CL:5503
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5503_Mixed,_incl._Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_NAD_or_NADP_as_acceptor,_and_Fermentation

description:
  Mixed, incl. Oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor, and Fermentation


id: CL:5504
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5504_Mixed,_incl._Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_NAD_or_NADP_as_acceptor,_and_Fermentation

description:
  Mixed, incl. Oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor, and Fermentation


id: CL:5506
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5506_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_NAD_or_NADP_as_acceptor,_and_Selenium-dependent_xanthine_dehydrogenase

description:
  Oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor, and Selenium-dependent xanthine dehydrogenase


id: CL:5508
description: [2Fe-2S]-binding, and Alkaloid catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5508_[2Fe-2S]-binding,_and_Alkaloid_catabolic_process


id: CL:552
description: Mixed, incl. Mismatch repair, and Chromosome
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:552_Mixed,_incl._Mismatch_repair,_and_Chromosome


id: CL:553
description: Mismatch repair, and DNA-templated DNA replication
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:553_Mismatch_repair,_and_DNA-templated_DNA_replication


id: CL:554
description: Mismatch repair, and DNA-templated DNA replication
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:554_Mismatch_repair,_and_DNA-templated_DNA_replication


id: CL:5548
description: Prosthetic group metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5548_Prosthetic_group_metabolic_process


id: CL:555
description: DNA replication, and DNA topoisomerase, type IA, active site
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:555_DNA_replication,_and_DNA_topoisomerase,_type_IA,_active_site


id: CL:556
description: DNA replication, and Mismatch repair
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:556_DNA_replication,_and_Mismatch_repair


id: CL:5561
description: Mixed, incl. CoA enzyme activase
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5561_Mixed,_incl._CoA_enzyme_activase


id: CL:5573
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5573_Mostly_uncharacterized,_incl._Cationic_antimicrobial_peptide_(CAMP)_resistance,_and_Zinc-ribbon_domain

description:
  Mostly uncharacterized, incl. Cationic antimicrobial peptide (CAMP) resistance, and Zinc-ribbon domain


id: CL:5574
description: Mixed, incl. L,D-transpeptidase central domain-like superfamily, and Protein repair
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5574_Mixed,_incl._L,D-transpeptidase_central_domain-like_superfamily,_and_Protein_repair


id: CL:5575
description: Mixed, incl. L,D-transpeptidase central domain-like superfamily, and EamA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5575_Mixed,_incl._L,D-transpeptidase_central_domain-like_superfamily,_and_EamA_domain


id: CL:5576
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5576_Mixed,_incl._L,D-transpeptidase_central_domain-like_superfamily,_and_Beta-lactamase_superfamily_domain

description:
  Mixed, incl. L,D-transpeptidase central domain-like superfamily, and Beta-lactamase superfamily domain


id: CL:5578
description: Mixed, incl. L,D-transpeptidase central domain-like superfamily, and Armadillo-type fold
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5578_Mixed,_incl._L,D-transpeptidase_central_domain-like_superfamily,_and_Armadillo-type_fold


id: CL:558
description: Mixed, incl. SOS response, and DNA topoisomerase, type IA, active site
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:558_Mixed,_incl._SOS_response,_and_DNA_topoisomerase,_type_IA,_active_site


id: CL:5596
description: Mixed, incl. Beta-lactamase superfamily domain, and Hemerythrin-like
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5596_Mixed,_incl._Beta-lactamase_superfamily_domain,_and_Hemerythrin-like


id: CL:560
description: HRDC domain, and DNA topoisomerase, type IA, active site
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:560_HRDC_domain,_and_DNA_topoisomerase,_type_IA,_active_site


id: CL:5605
description: Mixed, incl. EamA domain, and Acetoacetate decarboxylase
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5605_Mixed,_incl._EamA_domain,_and_Acetoacetate_decarboxylase


id: CL:5618
description: Mixed, incl. Protein repair, and Bacterial nucleoid
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5618_Mixed,_incl._Protein_repair,_and_Bacterial_nucleoid


id: CL:5620
description: Protein repair, and Thiolester hydrolase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5620_Protein_repair,_and_Thiolester_hydrolase_activity


id: CL:5643
description: Mixed, incl. Peptidoglycan muralytic activity, and Zinc-ribbon domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5643_Mixed,_incl._Peptidoglycan_muralytic_activity,_and_Zinc-ribbon_domain


id: CL:5644
description: Mixed, incl. N-acetylmuramoyl-L-alanine amidase activity, and Zinc-ribbon domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5644_Mixed,_incl._N-acetylmuramoyl-L-alanine_amidase_activity,_and_Zinc-ribbon_domain


id: CL:5646
description: Mixed, incl. N-acetylmuramoyl-L-alanine amidase activity, and Transglycosylase SLT domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5646_Mixed,_incl._N-acetylmuramoyl-L-alanine_amidase_activity,_and_Transglycosylase_SLT_domain


id: CL:5648
description: N-acetylmuramoyl-L-alanine amidase activity, and PGBD superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5648_N-acetylmuramoyl-L-alanine_amidase_activity,_and_PGBD_superfamily


id: CL:5677
description: Mixed, incl. Bile acid catabolic process, and Diadenylate cyclase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5677_Mixed,_incl._Bile_acid_catabolic_process,_and_Diadenylate_cyclase_activity


id: CL:5679
description: Mixed, incl. Diadenylate cyclase activity, and Mannose type O-glycan biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5679_Mixed,_incl._Diadenylate_cyclase_activity,_and_Mannose_type_O-glycan_biosynthesis


id: CL:5691
description: Mixed, incl. Bile acid catabolic process, and TRAM domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5691_Mixed,_incl._Bile_acid_catabolic_process,_and_TRAM_domain


id: CL:5702
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5702_Mostly_uncharacterized,_incl._Transmembrane_secretion_effector,_and_Peptidase_M32,_carboxypeptidase_Taq

description:
  Mostly uncharacterized, incl. Transmembrane secretion effector, and Peptidase M32, carboxypeptidase Taq


id: CL:5704
description: Mixed, incl. Transmembrane secretion effector, and Oligopeptidase F
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5704_Mixed,_incl._Transmembrane_secretion_effector,_and_Oligopeptidase_F


id: CL:5705
description: Mixed, incl. Oligopeptidase F, and Transmembrane secretion effector
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5705_Mixed,_incl._Oligopeptidase_F,_and_Transmembrane_secretion_effector


id: CL:5716
description: Mixed, incl. Transmembrane secretion effector, and Helix_turn_helix, Lux Regulon
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5716_Mixed,_incl._Transmembrane_secretion_effector,_and_Helix_turn_helix,_Lux_Regulon


id: CL:5732
description: Mixed, incl. Toxin biosynthetic process, and NUDIX hydrolase, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5732_Mixed,_incl._Toxin_biosynthetic_process,_and_NUDIX_hydrolase,_conserved_site


id: CL:5751
description: Mixed, incl. GNAT domain, and SAF domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5751_Mixed,_incl._GNAT_domain,_and_SAF_domain


id: CL:5752
description: Mixed, incl. Peptidyl-serine acetylation, and Lipopolysaccharide metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5752_Mixed,_incl._Peptidyl-serine_acetylation,_and_Lipopolysaccharide_metabolic_process


id: CL:5754
description: Mixed, incl. Peptidyl-serine acetylation, and SAF domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5754_Mixed,_incl._Peptidyl-serine_acetylation,_and_SAF_domain


id: CL:5755
description: Mixed, incl. SAF domain, and Peptidyl-serine acetylation
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5755_Mixed,_incl._SAF_domain,_and_Peptidyl-serine_acetylation


id: CL:5757
description: Mixed, incl. SAF domain, and Acylneuraminate cytidylyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5757_Mixed,_incl._SAF_domain,_and_Acylneuraminate_cytidylyltransferase


id: CL:5759
description: SAF domain, and Acylneuraminate cytidylyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5759_SAF_domain,_and_Acylneuraminate_cytidylyltransferase


id: CL:5786
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5786_Mixed,_incl._Carboxypeptidase-like,_regulatory_domain_superfamily,_and_6-hydroxymethylpterin_diphosphokinase_MptE-like

description:
  Mixed, incl. Carboxypeptidase-like, regulatory domain superfamily, and 6-hydroxymethylpterin diphosphokinase MptE-like


id: CL:5802
description: Mixed, incl. Peptidyl-serine acetylation, and Valyl-tRNA synthetase, tRNA-binding arm superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5802_Mixed,_incl._Peptidyl-serine_acetylation,_and_Valyl-tRNA_synthetase,_tRNA-binding_arm_superfamily


id: CL:5803
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5803_Mixed,_incl._Valyl-tRNA_synthetase,_tRNA-binding_arm_superfamily,_and_Acetyltransferase_(GNAT)_domain

description:
  Mixed, incl. Valyl-tRNA synthetase, tRNA-binding arm superfamily, and Acetyltransferase (GNAT) domain


id: CL:5812
description: Peptidyl-serine acetylation, and Viral process
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5812_Peptidyl-serine_acetylation,_and_Viral_process


id: CL:5821
description: Mixed, incl. Probable zinc-ribbon domain, and Transposase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5821_Mixed,_incl._Probable_zinc-ribbon_domain,_and_Transposase_activity


id: CL:5830
description: Mixed, incl. Lon protease, and Band 7 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5830_Mixed,_incl._Lon_protease,_and_Band_7_domain


id: CL:5831
description: Mixed, incl. Band 7 domain, and Protein of unknown function DUF4003
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5831_Mixed,_incl._Band_7_domain,_and_Protein_of_unknown_function_DUF4003


id: CL:5834
description: Mixed, incl. Band 7 domain, and Identical protein binding
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5834_Mixed,_incl._Band_7_domain,_and_Identical_protein_binding


id: CL:5857
description: Mixed, incl. Peptidase S16, active site, and Septation
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5857_Mixed,_incl._Peptidase_S16,_active_site,_and_Septation


id: CL:5871
description: Mostly uncharacterized, incl. Nitroreductase, and Flavoprotein-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5871_Mostly_uncharacterized,_incl._Nitroreductase,_and_Flavoprotein-like_superfamily


id: CL:5873
description: Mixed, incl. Nitroreductase, and Flavoprotein-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5873_Mixed,_incl._Nitroreductase,_and_Flavoprotein-like_superfamily


id: CL:5874
description: Mixed, incl. Nitroreductase, and Peptidase M50B-like
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5874_Mixed,_incl._Nitroreductase,_and_Peptidase_M50B-like


id: CL:5876
description: Mixed, incl. Butanol dehydrogenase-like, and Biosynthesis of various secondary metabolites - part 2
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5876_Mixed,_incl._Butanol_dehydrogenase-like,_and_Biosynthesis_of_various_secondary_metabolites_-_part_2


id: CL:5895
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5895_Mixed,_incl._Nitroreductase,_and_Oxidoreductase_activity,_acting_on_NAD(P)H,_quinone_or_similar_compound_as_acceptor

description:
  Mixed, incl. Nitroreductase, and Oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor


id: CL:5909
description: Mixed, incl. NADPH-dependent FMN reductase-like, and DNA dealkylation
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5909_Mixed,_incl._NADPH-dependent_FMN_reductase-like,_and_DNA_dealkylation


id: CL:591
description: DNA polymerase complex, and BRCT domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:591_DNA_polymerase_complex,_and_BRCT_domain


id: CL:5923
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5923_Mostly_uncharacterized,_incl._Ubiquinone_and_other_terpenoid-quinone_biosynthesis,_and_Citrate_transporter

description:
  Mostly uncharacterized, incl. Ubiquinone and other terpenoid-quinone biosynthesis, and Citrate transporter


id: CL:5924
description: Mostly uncharacterized, incl. Citrate transporter, and Protein of unknown function DUF4362
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5924_Mostly_uncharacterized,_incl._Citrate_transporter,_and_Protein_of_unknown_function_DUF4362


id: CL:5926
description: Mixed, incl. Von Willebrand factor (vWF) type A domain, and Rubrerythrin
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5926_Mixed,_incl._Von_Willebrand_factor_(vWF)_type_A_domain,_and_Rubrerythrin


id: CL:5945
description: Mixed, incl. NADPH-dependent FMN reductase, and tRNA 3-end processing
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5945_Mixed,_incl._NADPH-dependent_FMN_reductase,_and_tRNA_3-end_processing


id: CL:5960
description: Base excision repair, and Mitochondrial biogenesis AIM24
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5960_Base_excision_repair,_and_Mitochondrial_biogenesis_AIM24


id: CL:5962
description: Base-excision repair, and DNA dealkylation
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5962_Base-excision_repair,_and_DNA_dealkylation


id: CL:5981
description: Mixed, incl. ESAT-6-like superfamily, and Cationic antimicrobial peptide (CAMP) resistance
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5981_Mixed,_incl._ESAT-6-like_superfamily,_and_Cationic_antimicrobial_peptide_(CAMP)_resistance


id: CL:5982
description: Mixed, incl. ESAT-6-like superfamily, and FtsK domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5982_Mixed,_incl._ESAT-6-like_superfamily,_and_FtsK_domain


id: CL:5984
description: Mixed, incl. FtsK domain, and ESAT-6-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:5984_Mixed,_incl._FtsK_domain,_and_ESAT-6-like_superfamily


id: CL:6007
description: Mixed, incl. Maltose acetyltransferase, and AI-2E family transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:6007_Mixed,_incl._Maltose_acetyltransferase,_and_AI-2E_family_transporter


id: CL:602
description: Primosome, and Single-stranded DNA-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:602_Primosome,_and_Single-stranded_DNA-binding_protein


id: CL:6022
description: Mixed, incl. Response to alkaline pH, and Zinc finger, SWIM-type
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:6022_Mixed,_incl._Response_to_alkaline_pH,_and_Zinc_finger,_SWIM-type


id: CL:6023
description: Mixed, incl. Zinc finger, SWIM-type, and DNA/RNA polymerase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:6023_Mixed,_incl._Zinc_finger,_SWIM-type,_and_DNA/RNA_polymerase_superfamily


id: CL:6024
description: Mixed, incl. CAT RNA-binding domain, and Lipid catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:6024_Mixed,_incl._CAT_RNA-binding_domain,_and_Lipid_catabolic_process


id: CL:6033
description: Mixed, incl. Zinc finger, SWIM-type, and DNA/RNA polymerase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:6033_Mixed,_incl._Zinc_finger,_SWIM-type,_and_DNA/RNA_polymerase_superfamily


id: CL:6042
description: Mixed, incl. Response to alkaline pH, and Ferric-uptake regulator
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:6042_Mixed,_incl._Response_to_alkaline_pH,_and_Ferric-uptake_regulator


id: CL:6057
description: Mixed, incl. Symporter activity, and Amino acid permease
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:6057_Mixed,_incl._Symporter_activity,_and_Amino_acid_permease


id: CL:6058
description: Mixed, incl. Symporter activity, and Amino acid permease
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:6058_Mixed,_incl._Symporter_activity,_and_Amino_acid_permease


id: CL:6059
description: Mixed, incl. Symporter activity, and Cation efflux family
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:6059_Mixed,_incl._Symporter_activity,_and_Cation_efflux_family


id: CL:6060
description: Symporter activity, and Concentrative nucleoside transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:6060_Symporter_activity,_and_Concentrative_nucleoside_transporter


id: CL:6061
description: Symporter activity, and Na+/H+ antiporter family
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:6061_Symporter_activity,_and_Na+/H+_antiporter_family


id: CL:6065
description: Symport, and Na+/H+ antiporter family
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:6065_Symport,_and_Na+/H+_antiporter_family


id: CL:6083
description: Putative sugar-binding domain, and Sodium:dicarboxylate symporter
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:6083_Putative_sugar-binding_domain,_and_Sodium:dicarboxylate_symporter


id: CL:6095
description: Cation efflux family, and Ion channel activity
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:6095_Cation_efflux_family,_and_Ion_channel_activity


id: CL:6105
description: Amino acid permease, and Branched-chain amino acid transport protein
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:6105_Amino_acid_permease,_and_Branched-chain_amino_acid_transport_protein


id: CL:612
description: Mixed, incl. DNA topoisomerase, type IIA-like domain superfamily, and DNA replication initiation
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:612_Mixed,_incl._DNA_topoisomerase,_type_IIA-like_domain_superfamily,_and_DNA_replication_initiation


id: CL:6125
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:6125_Mostly_uncharacterized,_incl._Major_facilitator_superfamily,_and_Positive_regulation_of_cellular_process

description:
  Mostly uncharacterized, incl. Major facilitator superfamily, and Positive regulation of cellular process


id: CL:6126
description: Mostly uncharacterized, incl. Major facilitator superfamily, and Nuclease-related domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:6126_Mostly_uncharacterized,_incl._Major_facilitator_superfamily,_and_Nuclease-related_domain


id: CL:6127
description: Mixed, incl. Major facilitator superfamily, and CNNM, transmembrane domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:6127_Mixed,_incl._Major_facilitator_superfamily,_and_CNNM,_transmembrane_domain


id: CL:6129
description: Mixed, incl. Transcription regulators MarR/SlyA-like, and Transcription regulator PadR, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:6129_Mixed,_incl._Transcription_regulators_MarR/SlyA-like,_and_Transcription_regulator_PadR,_N-terminal


id: CL:6152
description: Mixed, incl. Nuclease-related domain, and Cupin domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:6152_Mixed,_incl._Nuclease-related_domain,_and_Cupin_domain


id: CL:6163
description: Mixed, incl. Protein phosphopantetheinylation, and DUF218 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:6163_Mixed,_incl._Protein_phosphopantetheinylation,_and_DUF218_domain


id: CL:6177
description: Mixed, incl. DNA recombination, and Primosome complex
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:6177_Mixed,_incl._DNA_recombination,_and_Primosome_complex


id: CL:6178
description: Mixed, incl. DNA recombination, and Primosome complex
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:6178_Mixed,_incl._DNA_recombination,_and_Primosome_complex


id: CL:6179
description: Mixed, incl. DNA recombination, and Primosome complex
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:6179_Mixed,_incl._DNA_recombination,_and_Primosome_complex


id: CL:6180
description: Mixed, incl. Primosome complex, and DNA recombination
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:6180_Mixed,_incl._Primosome_complex,_and_DNA_recombination


id: CL:6181
description: Mixed, incl. Primosome complex, and Monobactam biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:6181_Mixed,_incl._Primosome_complex,_and_Monobactam_biosynthesis


id: CL:6182
description: Mixed, incl. Primosome complex, and Monobactam biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:6182_Mixed,_incl._Primosome_complex,_and_Monobactam_biosynthesis


id: CL:6184
description: Mixed, incl. AAA-ATPase-like domain, and Double-strand break repair
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:6184_Mixed,_incl._AAA-ATPase-like_domain,_and_Double-strand_break_repair


id: CL:6186
description: AAA-ATPase-like domain, and Double-strand break repair
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:6186_AAA-ATPase-like_domain,_and_Double-strand_break_repair


id: CL:6189
description: AAA-ATPase-like domain, and Protein of unknown function DUF3990
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:6189_AAA-ATPase-like_domain,_and_Protein_of_unknown_function_DUF3990


id: CL:6191
description: Predicted AAA-ATPase, and Primosome complex
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:6191_Predicted_AAA-ATPase,_and_Primosome_complex


id: CL:6236
description: Mixed, incl. Sister chromatid cohesion, and Endodeoxyribonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:6236_Mixed,_incl._Sister_chromatid_cohesion,_and_Endodeoxyribonuclease_activity


id: CL:6258
description: Mixed, incl. DnaD domain, and DNA strand elongation
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:6258_Mixed,_incl._DnaD_domain,_and_DNA_strand_elongation


id: CL:6269
description: PD-(D/E)XK nuclease transposase sub-family, and Aspartic peptidase domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:6269_PD-(D/E)XK_nuclease_transposase_sub-family,_and_Aspartic_peptidase_domain_superfamily


id: CL:6289
description: Mixed, incl. DDE transposase sub-family, and DNA strand exchange activity
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:6289_Mixed,_incl._DDE_transposase_sub-family,_and_DNA_strand_exchange_activity


id: CL:6291
description: Mixed, incl. TniQ, and AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:6291_Mixed,_incl._TniQ,_and_AAA_domain


id: CL:6304
description: DDE transposase sub-family, and DNA strand exchange activity
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:6304_DDE_transposase_sub-family,_and_DNA_strand_exchange_activity


id: CL:6321
description: Mixed, incl. Transposition, DNA-mediated, and DNA modification
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:6321_Mixed,_incl._Transposition,_DNA-mediated,_and_DNA_modification


id: CL:6322
description: Mixed, incl. Transposase activity, and Fido domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:6322_Mixed,_incl._Transposase_activity,_and_Fido_domain


id: CL:6323
description: Transposase activity, and Integrase, catalytic core
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:6323_Transposase_activity,_and_Integrase,_catalytic_core


id: CL:6325
description: Transposition, and DDE transposase retroviral integrase sub-family
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:6325_Transposition,_and_DDE_transposase_retroviral_integrase_sub-family


id: CL:6342
description: Fido domain, and tRNA endonuclease-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:6342_Fido_domain,_and_tRNA_endonuclease-like_domain_superfamily


id: CL:635
description: DNA topoisomerase, type IIA-like domain superfamily, and Peroxidase
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:635_DNA_topoisomerase,_type_IIA-like_domain_superfamily,_and_Peroxidase


id: CL:6352
description: Mixed, incl. DNA modification, and DDE transposase sub-family
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:6352_Mixed,_incl._DNA_modification,_and_DDE_transposase_sub-family


id: CL:6356
description: DNA restriction-modification system, and Type I restriction modification DNA specificity domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:6356_DNA_restriction-modification_system,_and_Type_I_restriction_modification_DNA_specificity_domain


id: CL:6381
description: tRNA nuclease HepT-like superfamily, and Nucleotidyltransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:6381_tRNA_nuclease_HepT-like_superfamily,_and_Nucleotidyltransferase_domain


id: CL:6383
description: Ribonuclease HepT-like, and Polymerase beta, nucleotidyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:6383_Ribonuclease_HepT-like,_and_Polymerase_beta,_nucleotidyltransferase


id: CL:6410
description: Mixed, incl. AAA domain, group 15, and Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:6410_Mixed,_incl._AAA_domain,_group_15,_and_Helicase_superfamily_1/2,_ATP-binding_domain,_DinG/Rad3-type


id: CL:6411
description: Mixed, incl. AAA domain, group 15, and Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:6411_Mixed,_incl._AAA_domain,_group_15,_and_Helicase_superfamily_1/2,_ATP-binding_domain,_DinG/Rad3-type


id: CL:6420
description: Mixed, incl. WD40/YVTN repeat-like-containing domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:6420_Mixed,_incl._WD40/YVTN_repeat-like-containing_domain_superfamily


id: CL:6432
description: Mixed, incl. Murein tetrapeptide carboxypeptidase, N-terminal, and SNARE associated Golgi protein
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:6432_Mixed,_incl._Murein_tetrapeptide_carboxypeptidase,_N-terminal,_and_SNARE_associated_Golgi_protein


id: CL:6434
description: Mixed, incl. Putative adhesin, and DDE transposase retroviral integrase sub-family
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:6434_Mixed,_incl._Putative_adhesin,_and_DDE_transposase_retroviral_integrase_sub-family


id: CL:644
description: Mixed, incl. MerR transcriptional regulator, and RNA polymerase
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:644_Mixed,_incl._MerR_transcriptional_regulator,_and_RNA_polymerase


id: CL:6454
description: Mixed, incl. Murein tetrapeptide carboxypeptidase, N-terminal, and SNARE associated Golgi protein
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:6454_Mixed,_incl._Murein_tetrapeptide_carboxypeptidase,_N-terminal,_and_SNARE_associated_Golgi_protein


id: CL:6456
description: Murein tetrapeptide carboxypeptidase, N-terminal, and Peptidase M50B-like
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:6456_Murein_tetrapeptide_carboxypeptidase,_N-terminal,_and_Peptidase_M50B-like


id: CL:647
description: Mixed, incl. RNA polymerase, and Bacterial transcription activator, effector binding
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:647_Mixed,_incl._RNA_polymerase,_and_Bacterial_transcription_activator,_effector_binding


id: CL:6478
description: Mixed, incl. FMN binding, and Heparin binding
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:6478_Mixed,_incl._FMN_binding,_and_Heparin_binding


id: CL:6479
description: Mixed, incl. Lipoprotein, and Serine aminopeptidase, S33
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:6479_Mixed,_incl._Lipoprotein,_and_Serine_aminopeptidase,_S33


id: CL:648
description: Mixed, incl. RNA polymerase, and PLD-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:648_Mixed,_incl._RNA_polymerase,_and_PLD-like_domain


id: CL:6492
description: Mixed, incl. Heparin binding, and Putative zincin peptidase
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:6492_Mixed,_incl._Heparin_binding,_and_Putative_zincin_peptidase


id: CL:6506
description: Mixed, incl. Bacterial microcompartment, and Chromate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:6506_Mixed,_incl._Bacterial_microcompartment,_and_Chromate_transport


id: CL:6508
description: Mixed, incl. CcmK-like superfamily, and Flavoprotein
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:6508_Mixed,_incl._CcmK-like_superfamily,_and_Flavoprotein


id: CL:6511
description: CcmK-like superfamily, and Hsp70 protein
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:6511_CcmK-like_superfamily,_and_Hsp70_protein


id: CL:652
description: RNA polymerase, and PLD-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:652_RNA_polymerase,_and_PLD-like_domain


id: CL:6529
description: Aquaporin-like, and Nitrogen metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:6529_Aquaporin-like,_and_Nitrogen_metabolism


id: CL:6542
description: Mixed, incl. Chromate transport, and Tetratricopeptide-like helical domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:6542_Mixed,_incl._Chromate_transport,_and_Tetratricopeptide-like_helical_domain_superfamily


id: CL:6544
description: Mixed, incl. Lipid degradation, and RQC domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:6544_Mixed,_incl._Lipid_degradation,_and_RQC_domain


id: CL:6558
description: Chromate transport, and AsnC-type HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:6558_Chromate_transport,_and_AsnC-type_HTH_domain


id: CL:6567
description: Mostly uncharacterized, incl. ELP3/YhcC, and Protein of unknown function DUF4003
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:6567_Mostly_uncharacterized,_incl._ELP3/YhcC,_and_Protein_of_unknown_function_DUF4003


id: CL:6568
description: Mostly uncharacterized, incl. Protein of unknown function DUF4003, and ABC transporter, permease
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:6568_Mostly_uncharacterized,_incl._Protein_of_unknown_function_DUF4003,_and_ABC_transporter,_permease


id: CL:6570
description: Mixed, incl. Protein of unknown function DUF4003, and ABC transporter, permease
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:6570_Mixed,_incl._Protein_of_unknown_function_DUF4003,_and_ABC_transporter,_permease


id: CL:6593
description: Mixed, incl. ELP3/YhcC, and Pyruvate-formate lyase-activating enzyme, predicted
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:6593_Mixed,_incl._ELP3/YhcC,_and_Pyruvate-formate_lyase-activating_enzyme,_predicted


id: CL:6602
description: Mixed, incl. Ribonuclease J, and Phage integrase, N-terminal SAM-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:6602_Mixed,_incl._Ribonuclease_J,_and_Phage_integrase,_N-terminal_SAM-like_domain


id: CL:6622
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:6622_Mostly_uncharacterized,_incl._Biological_process_involved_in_interspecies_interaction_between_organisms,_and_Antiport

description:
  Mostly uncharacterized, incl. Biological process involved in interspecies interaction between organisms, and Antiport


id: CL:6624
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:6624_Mostly_uncharacterized,_incl._Biological_process_involved_in_interspecies_interaction_between_organisms,_and_BhlA_holin_family

description:
  Mostly uncharacterized, incl. Biological process involved in interspecies interaction between organisms, and BhlA holin family


id: CL:6625
description: Mostly uncharacterized, incl. Host cell cytoplasm, and DNA integration
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:6625_Mostly_uncharacterized,_incl._Host_cell_cytoplasm,_and_DNA_integration


id: CL:6627
description: Mixed, incl. Host cell cytoplasm, and DNA integration
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:6627_Mixed,_incl._Host_cell_cytoplasm,_and_DNA_integration


id: CL:6653
description: Mixed, incl. BhlA holin family, and Xylene degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:6653_Mixed,_incl._BhlA_holin_family,_and_Xylene_degradation


id: CL:6668
description: Mixed, incl. Antiport, and Bacterial-type flagellum organization
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:6668_Mixed,_incl._Antiport,_and_Bacterial-type_flagellum_organization


id: CL:6682
description: Mixed, incl. Pre-toxin TG, and Nucleus
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:6682_Mixed,_incl._Pre-toxin_TG,_and_Nucleus


id: CL:6685
description: Mixed, incl. Pre-toxin TG, and Nucleus
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:6685_Mixed,_incl._Pre-toxin_TG,_and_Nucleus


id: CL:669
description: Bacterial transcription activator, effector binding
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:669_Bacterial_transcription_activator,_effector_binding


id: CL:6703
description: Mixed, incl. Transposase domain (DUF772), and Response to bacterium
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:6703_Mixed,_incl._Transposase_domain_(DUF772),_and_Response_to_bacterium


id: CL:6714
description: Mixed, incl. YvrJ protein family, and Protein of unknown function DUF1659
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:6714_Mixed,_incl._YvrJ_protein_family,_and_Protein_of_unknown_function_DUF1659


id: CL:6795
description: Mixed, incl. RNA polymerase complex, and Winged helix DNA-binding domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:6795_Mixed,_incl._RNA_polymerase_complex,_and_Winged_helix_DNA-binding_domain_superfamily


id: CL:6796
description: Mixed, incl. Winged helix DNA-binding domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:6796_Mixed,_incl._Winged_helix_DNA-binding_domain_superfamily


id: CL:6805
description: Mixed, incl. RNA polymerase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:6805_Mixed,_incl._RNA_polymerase_complex


id: CL:6857
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:6857_Mixed,_incl._DNA_breaking-rejoining_enzyme,_catalytic_core,_and_Winged_helix_DNA-binding_domain_superfamily

description:
  Mixed, incl. DNA breaking-rejoining enzyme, catalytic core, and Winged helix DNA-binding domain superfamily


id: CL:686
description: Mixed, incl. rRNA methyltransferase activity, and Alcohol binding
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:686_Mixed,_incl._rRNA_methyltransferase_activity,_and_Alcohol_binding


id: CL:689
description: rRNA methyltransferase activity, and Formyl transferase
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:689_rRNA_methyltransferase_activity,_and_Formyl_transferase


id: CL:714
description: Mixed, incl. ParB/Sulfiredoxin, and Jag, N-terminal domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:714_Mixed,_incl._ParB/Sulfiredoxin,_and_Jag,_N-terminal_domain_superfamily


id: CL:715
description: ParB/Sulfiredoxin, and AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:715_ParB/Sulfiredoxin,_and_AAA_domain


id: CL:717
description: ParB/Spo0J, HTH domain, and AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:717_ParB/Spo0J,_HTH_domain,_and_AAA_domain


id: CL:734
description: Mixed, incl. Jag, N-terminal domain superfamily, and Protein carrier chaperone
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:734_Mixed,_incl._Jag,_N-terminal_domain_superfamily,_and_Protein_carrier_chaperone


id: CL:745
description: Mixed, incl. NAD biosynthetic process, and RNA capping
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:745_Mixed,_incl._NAD_biosynthetic_process,_and_RNA_capping


id: CL:747
description: Mixed, incl. NAD biosynthetic process, and RNA capping
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:747_Mixed,_incl._NAD_biosynthetic_process,_and_RNA_capping


id: CL:766
description: Mixed, incl. RNA modification, and CBS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:766_Mixed,_incl._RNA_modification,_and_CBS_domain


id: CL:767
description: Mixed, incl. tRNA threonylcarbamoyladenosine modification, and RNA methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:767_Mixed,_incl._tRNA_threonylcarbamoyladenosine_modification,_and_RNA_methyltransferase_activity


id: CL:768
description: Mixed, incl. tRNA threonylcarbamoyladenosine modification, and CNNM, transmembrane domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:768_Mixed,_incl._tRNA_threonylcarbamoyladenosine_modification,_and_CNNM,_transmembrane_domain


id: CL:792
description: Mixed, incl. Ribosome biogenesis, and HIT-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:792_Mixed,_incl._Ribosome_biogenesis,_and_HIT-like_superfamily


id: CL:794
description: Mixed, incl. UBA-like superfamily, and K Homology domain, type 2
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:794_Mixed,_incl._UBA-like_superfamily,_and_K_Homology_domain,_type_2


id: CL:807
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:807_Mixed,_incl._HIT-like_superfamily,_and_Protein-L-isoaspartate(D-aspartate)_O-methyltransferase_(PCMT)

description:
  Mixed, incl. HIT-like superfamily, and Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)


id: CL:817
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:817_Mixed,_incl._Nucleobase-containing_small_molecule_metabolic_process,_and_Vitamin_biosynthetic_process

description:
  Mixed, incl. Nucleobase-containing small molecule metabolic process, and Vitamin biosynthetic process


id: CL:818
description: Mixed, incl. Pyrimidine metabolism, and Cyclic nucleotide-monophosphate binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:818_Mixed,_incl._Pyrimidine_metabolism,_and_Cyclic_nucleotide-monophosphate_binding_domain


id: CL:819
description: Mixed, incl. Pyrimidine metabolism, and Purine nucleotide salvage
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:819_Mixed,_incl._Pyrimidine_metabolism,_and_Purine_nucleotide_salvage


id: CL:820
description: Mixed, incl. Nucleoside metabolic process, and Nucleotide salvage
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:820_Mixed,_incl._Nucleoside_metabolic_process,_and_Nucleotide_salvage


id: CL:821
description: Mixed, incl. Nucleoside metabolic process, and Nucleotide salvage
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:821_Mixed,_incl._Nucleoside_metabolic_process,_and_Nucleotide_salvage


id: CL:823
description: Nucleoside metabolic process, and Phosphoribulokinase/uridine kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:823_Nucleoside_metabolic_process,_and_Phosphoribulokinase/uridine_kinase


id: CL:825
description: Pyrimidine nucleoside metabolic process, and Phosphorylase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:825_Pyrimidine_nucleoside_metabolic_process,_and_Phosphorylase_superfamily


id: CL:841
description: Adenine metabolic process, and Purine-nucleoside phosphorylase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:841_Adenine_metabolic_process,_and_Purine-nucleoside_phosphorylase_activity


id: CL:861
description: Mixed, incl. IMP salvage, and RNA polymerase binding
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:861_Mixed,_incl._IMP_salvage,_and_RNA_polymerase_binding


id: CL:870
description: Mixed, incl. dUMP metabolic process, and Ribonucleoside hydrolase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:870_Mixed,_incl._dUMP_metabolic_process,_and_Ribonucleoside_hydrolase-like


id: CL:879
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:879_Mixed,_incl._Pyrimidine_nucleoside_triphosphate_metabolic_process,_and_Ribonucleoside-triphosphate_reductase_activity

description:
  Mixed, incl. Pyrimidine nucleoside triphosphate metabolic process, and Ribonucleoside-triphosphate reductase activity


id: CL:882
description: Deoxyribonucleotide biosynthetic process, and Nucleoside kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:882_Deoxyribonucleotide_biosynthetic_process,_and_Nucleoside_kinase_activity


id: CL:904
description: Mixed, incl. Helix_turn_helix, cAMP Regulatory protein, and TPR repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:904_Mixed,_incl._Helix_turn_helix,_cAMP_Regulatory_protein,_and_TPR_repeat


id: CL:923
description: Mixed, incl. Riboflavin metabolic process, and Pyridine nucleotide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:923_Mixed,_incl._Riboflavin_metabolic_process,_and_Pyridine_nucleotide_biosynthetic_process


id: CL:924
description: Mixed, incl. Riboflavin metabolic process, and Pyridine nucleotide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:924_Mixed,_incl._Riboflavin_metabolic_process,_and_Pyridine_nucleotide_biosynthetic_process


id: CL:925
description: Mixed, incl. Riboflavin metabolic process, and Pyridine nucleotide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:925_Mixed,_incl._Riboflavin_metabolic_process,_and_Pyridine_nucleotide_biosynthetic_process


id: CL:926
description: Riboflavin metabolic process, and HAD hydrolase, subfamily IA
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:926_Riboflavin_metabolic_process,_and_HAD_hydrolase,_subfamily_IA


id: CL:957
description: Pyridine nucleotide biosynthetic process, and NUDIX hydrolase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:957_Pyridine_nucleotide_biosynthetic_process,_and_NUDIX_hydrolase_domain


id: CL:959
description: Quinolinate metabolic process, and Nicotinate phosphoribosyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:959_Quinolinate_metabolic_process,_and_Nicotinate_phosphoribosyltransferase_activity


id: CL:982
description: Mixed, incl. Queuosine biosynthesis, and Tetrahydrofolate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:982_Mixed,_incl._Queuosine_biosynthesis,_and_Tetrahydrofolate_biosynthetic_process


id: CL:984
description: Queuosine biosynthesis, and Benzoate degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:984_Queuosine_biosynthesis,_and_Benzoate_degradation


id: CL:994
name:
  Local Network Cluster (STRING).STRING_v12.0_119641_STRINGid_CL:994_Folate_biosynthesis,_and_GTP_cyclohydrolase_I,_C-terminal/NADPH-dependent_7-cyano-7-deazaguanine_reductase

description:
  Folate biosynthesis, and GTP cyclohydrolase I, C-terminal/NADPH-dependent 7-cyano-7-deazaguanine reductase


id: GO:0000394
description: RNA splicing, via endonucleolytic cleavage and ligation
memo: https://amigo.geneontology.org/amigo/term/GO:0000394
golevel: 6
name:
  GOBP.STRING_v12.0_119641_STRINGid_GO:0000394_RNA_splicing,_via_endonucleolytic_cleavage_and_ligation


id: GO:0000716
description: Transcription-coupled nucleotide-excision repair, DNA damage recognition
memo: https://amigo.geneontology.org/amigo/term/GO:0000716
golevel: 7
name:
  GOBP.STRING_v12.0_119641_STRINGid_GO:0000716_Transcription-coupled_nucleotide-excision_repair,_DNA_damage_recognition


id: GO:0000724
description: Double-strand break repair via homologous recombination
memo: https://amigo.geneontology.org/amigo/term/GO:0000724
golevel: 7
name:
  GOBP.STRING_v12.0_119641_STRINGid_GO:0000724_Double-strand_break_repair_via_homologous_recombination


id: GO:0001073
description: Transcription antitermination factor activity, DNA binding
memo: https://amigo.geneontology.org/amigo/term/GO:0001073
golevel: 2
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0001073_Transcription_antitermination_factor_activity,_DNA_binding


id: GO:0002926
description: tRNA wobble base 5-methoxycarbonylmethyl-2-thiouridinylation
memo: https://amigo.geneontology.org/amigo/term/GO:0002926
golevel: 9
name:
  GOBP.STRING_v12.0_119641_STRINGid_GO:0002926_tRNA_wobble_base_5-methoxycarbonylmethyl-2-thiouridinylation


id: GO:0003848
description: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003848
golevel: 5
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0003848_2-amino-4-hydroxy-6-hydroxymethyldihydropteridine_diphosphokinase_activity


id: GO:0003864
description: 3-methyl-2-oxobutanoate hydroxymethyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003864
golevel: 5
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0003864_3-methyl-2-oxobutanoate_hydroxymethyltransferase_activity


id: GO:0003882
description: CDP-diacylglycerol-serine O-phosphatidyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003882
golevel: 6
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0003882_CDP-diacylglycerol-serine_O-phosphatidyltransferase_activity


id: GO:0003906
description: DNA-(apurinic or apyrimidinic site) endonuclease activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003906
golevel: 6
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0003906_DNA-(apurinic_or_apyrimidinic_site)_endonuclease_activity


id: GO:0003908
description: methylated-DNA-[protein]-cysteine S-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003908
golevel: 4
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0003908_methylated-DNA-[protein]-cysteine_S-methyltransferase_activity


id: GO:0003917
description: DNA topoisomerase type I (single strand cut, ATP-independent) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003917
golevel: 5
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0003917_DNA_topoisomerase_type_I_(single_strand_cut,_ATP-independent)_activity


id: GO:0003918
description: DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003918
golevel: 3
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0003918_DNA_topoisomerase_type_II_(double_strand_cut,_ATP-hydrolyzing)_activity


id: GO:0003949
memo: https://amigo.geneontology.org/amigo/term/GO:0003949
golevel: 5
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0003949_1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide_isomerase_activity

description:
  1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity


id: GO:0003992
description: N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003992
golevel: 5
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0003992_N2-acetyl-L-ornithine:2-oxoglutarate_5-aminotransferase_activity


id: GO:0004018
description: N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004018
golevel: 5
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0004018_N6-(1,2-dicarboxyethyl)AMP_AMP-lyase_(fumarate-forming)_activity


id: GO:0004088
description: Carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004088
golevel: 5
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0004088_Carbamoyl-phosphate_synthase_(glutamine-hydrolyzing)_activity


id: GO:0004316
description: 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004316
golevel: 5
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0004316_3-oxoacyl-[acyl-carrier-protein]_reductase_(NADPH)_activity


id: GO:0004317
description: 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004317
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0004317_3-hydroxypalmitoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0004360
description: glutamine-fructose-6-phosphate transaminase (isomerizing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004360
golevel: 6
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0004360_glutamine-fructose-6-phosphate_transaminase_(isomerizing)_activity


id: GO:0004486
description: Methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004486
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0004486_Methylenetetrahydrofolate_dehydrogenase_[NAD(P)+]_activity


id: GO:0004488
description: Methylenetetrahydrofolate dehydrogenase (NADP+) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004488
golevel: 5
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0004488_Methylenetetrahydrofolate_dehydrogenase_(NADP+)_activity


id: GO:0004514
description: Nicotinate-nucleotide diphosphorylase (carboxylating) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004514
golevel: 5
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0004514_Nicotinate-nucleotide_diphosphorylase_(carboxylating)_activity


id: GO:0004616
description: Phosphogluconate dehydrogenase (decarboxylating) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004616
golevel: 5
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0004616_Phosphogluconate_dehydrogenase_(decarboxylating)_activity


id: GO:0004639
description: Phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004639
golevel: 5
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0004639_Phosphoribosylaminoimidazolesuccinocarboxamide_synthase_activity


id: GO:0004641
description: Phosphoribosylformylglycinamidine cyclo-ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004641
golevel: 5
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0004641_Phosphoribosylformylglycinamidine_cyclo-ligase_activity


id: GO:0004643
description: Phosphoribosylaminoimidazolecarboxamide formyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004643
golevel: 5
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0004643_Phosphoribosylaminoimidazolecarboxamide_formyltransferase_activity


id: GO:0006388
description: tRNA splicing, via endonucleolytic cleavage and ligation
memo: https://amigo.geneontology.org/amigo/term/GO:0006388
golevel: 6
name:
  GOBP.STRING_v12.0_119641_STRINGid_GO:0006388_tRNA_splicing,_via_endonucleolytic_cleavage_and_ligation


id: GO:0006515
description: Protein quality control for misfolded or incompletely synthesized proteins
memo: https://amigo.geneontology.org/amigo/term/GO:0006515
golevel: 7
name:
  GOBP.STRING_v12.0_119641_STRINGid_GO:0006515_Protein_quality_control_for_misfolded_or_incompletely_synthesized_proteins


id: GO:0006614
description: SRP-dependent cotranslational protein targeting to membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0006614
golevel: 6
name:
  GOBP.STRING_v12.0_119641_STRINGid_GO:0006614_SRP-dependent_cotranslational_protein_targeting_to_membrane


id: GO:0007157
description: Heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules
memo: https://amigo.geneontology.org/amigo/term/GO:0007157
golevel: 4
name:
  GOBP.STRING_v12.0_119641_STRINGid_GO:0007157_Heterophilic_cell-cell_adhesion_via_plasma_membrane_cell_adhesion_molecules


id: GO:0008108
description: UDP-glucose:hexose-1-phosphate uridylyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008108
golevel: 6
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0008108_UDP-glucose:hexose-1-phosphate_uridylyltransferase_activity


id: GO:0008263
description: Pyrimidine-specific mismatch base pair DNA N-glycosylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008263
golevel: 6
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0008263_Pyrimidine-specific_mismatch_base_pair_DNA_N-glycosylase_activity


id: GO:0008271
description: Secondary active sulfate transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008271
golevel: 5
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0008271_Secondary_active_sulfate_transmembrane_transporter_activity


id: GO:0008444
description: CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008444
golevel: 6
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0008444_CDP-diacylglycerol-glycerol-3-phosphate_3-phosphatidyltransferase_activity


id: GO:0008534
description: Oxidized purine nucleobase lesion DNA N-glycosylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008534
golevel: 6
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0008534_Oxidized_purine_nucleobase_lesion_DNA_N-glycosylase_activity


id: GO:0008657
description: DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) inhibitor activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008657
golevel: 4
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0008657_DNA_topoisomerase_type_II_(double_strand_cut,_ATP-hydrolyzing)_inhibitor_activity


id: GO:0008659
description: (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008659
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0008659_(3R)-hydroxymyristoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0008685
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008685
golevel: 4
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0008685_2-C-methyl-D-erythritol_2,4-cyclodiphosphate_synthase_activity


id: GO:0008690
description: 3-deoxy-manno-octulosonate cytidylyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008690
golevel: 6
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0008690_3-deoxy-manno-octulosonate_cytidylyltransferase_activity


id: GO:0008693
description: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008693
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0008693_3-hydroxydecanoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0008703
description: 5-amino-6-(5-phosphoribosylamino)uracil reductase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008703
golevel: 5
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0008703_5-amino-6-(5-phosphoribosylamino)uracil_reductase_activity


id: GO:0008757
description: S-adenosylmethionine-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008757
golevel: 5
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0008757_S-adenosylmethionine-dependent_methyltransferase_activity


id: GO:0008760
description: UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008760
golevel: 4
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0008760_UDP-N-acetylglucosamine_1-carboxyvinyltransferase_activity


id: GO:0008764
description: UDP-N-acetylmuramoylalanine-D-glutamate ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008764
golevel: 5
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0008764_UDP-N-acetylmuramoylalanine-D-glutamate_ligase_activity


id: GO:0008765
description: UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008765
golevel: 5
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0008765_UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate_ligase_activity


id: GO:0008766
description: UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008766
golevel: 5
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0008766_UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine_ligase_activity


id: GO:0008817
description: cob(I)yrinic acid a,c-diamide adenosyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008817
golevel: 4
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0008817_cob(I)yrinic_acid_a,c-diamide_adenosyltransferase_activity


id: GO:0008835
description: Diaminohydroxyphosphoribosylaminopyrimidine deaminase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008835
golevel: 5
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0008835_Diaminohydroxyphosphoribosylaminopyrimidine_deaminase_activity


id: GO:0008939
description: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008939
golevel: 5
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0008939_Nicotinate-nucleotide-dimethylbenzimidazole_phosphoribosyltransferase_activity


id: GO:0008961
description: Phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008961
golevel: 3
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0008961_Phosphatidylglycerol-prolipoprotein_diacylglyceryl_transferase_activity


id: GO:0008963
description: phospho-N-acetylmuramoyl-pentapeptide-transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008963
golevel: 5
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0008963_phospho-N-acetylmuramoyl-pentapeptide-transferase_activity


id: GO:0008965
description: Phosphoenolpyruvate-protein phosphotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008965
golevel: 5
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0008965_Phosphoenolpyruvate-protein_phosphotransferase_activity


id: GO:0008982
description: protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008982
golevel: 4
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0008982_protein-N(PI)-phosphohistidine-sugar_phosphotransferase_activity


id: GO:0009007
description: Site-specific DNA-methyltransferase (adenine-specific) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0009007
golevel: 5
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0009007_Site-specific_DNA-methyltransferase_(adenine-specific)_activity


id: GO:0009095
description: Aromatic amino acid family biosynthetic process, prephenate pathway
memo: https://amigo.geneontology.org/amigo/term/GO:0009095
golevel: 7
name:
  GOBP.STRING_v12.0_119641_STRINGid_GO:0009095_Aromatic_amino_acid_family_biosynthetic_process,_prephenate_pathway


id: GO:0009130
description: Pyrimidine nucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009130
golevel: 7
name:
  GOBP.STRING_v12.0_119641_STRINGid_GO:0009130_Pyrimidine_nucleoside_monophosphate_biosynthetic_process


id: GO:0009148
description: Pyrimidine nucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009148
golevel: 7
name:
  GOBP.STRING_v12.0_119641_STRINGid_GO:0009148_Pyrimidine_nucleoside_triphosphate_biosynthetic_process


id: GO:0009168
description: Purine ribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009168
golevel: 8
name:
  GOBP.STRING_v12.0_119641_STRINGid_GO:0009168_Purine_ribonucleoside_monophosphate_biosynthetic_process


id: GO:0009173
description: Pyrimidine ribonucleoside monophosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009173
golevel: 8
name:
  GOBP.STRING_v12.0_119641_STRINGid_GO:0009173_Pyrimidine_ribonucleoside_monophosphate_metabolic_process


id: GO:0009174
description: Pyrimidine ribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009174
golevel: 8
name:
  GOBP.STRING_v12.0_119641_STRINGid_GO:0009174_Pyrimidine_ribonucleoside_monophosphate_biosynthetic_process


id: GO:0009176
description: Pyrimidine deoxyribonucleoside monophosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009176
golevel: 8
name:
  GOBP.STRING_v12.0_119641_STRINGid_GO:0009176_Pyrimidine_deoxyribonucleoside_monophosphate_metabolic_process


id: GO:0009177
description: Pyrimidine deoxyribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009177
golevel: 8
name:
  GOBP.STRING_v12.0_119641_STRINGid_GO:0009177_Pyrimidine_deoxyribonucleoside_monophosphate_biosynthetic_process


id: GO:0009196
description: Pyrimidine deoxyribonucleoside diphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009196
golevel: 8
name:
  GOBP.STRING_v12.0_119641_STRINGid_GO:0009196_Pyrimidine_deoxyribonucleoside_diphosphate_metabolic_process


id: GO:0009197
description: Pyrimidine deoxyribonucleoside diphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009197
golevel: 8
name:
  GOBP.STRING_v12.0_119641_STRINGid_GO:0009197_Pyrimidine_deoxyribonucleoside_diphosphate_biosynthetic_process


id: GO:0009206
description: Purine ribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009206
golevel: 8
name:
  GOBP.STRING_v12.0_119641_STRINGid_GO:0009206_Purine_ribonucleoside_triphosphate_biosynthetic_process


id: GO:0009208
description: Pyrimidine ribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009208
golevel: 8
name:
  GOBP.STRING_v12.0_119641_STRINGid_GO:0009208_Pyrimidine_ribonucleoside_triphosphate_metabolic_process


id: GO:0009209
description: Pyrimidine ribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009209
golevel: 8
name:
  GOBP.STRING_v12.0_119641_STRINGid_GO:0009209_Pyrimidine_ribonucleoside_triphosphate_biosynthetic_process


id: GO:0009210
description: Pyrimidine ribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009210
golevel: 8
name:
  GOBP.STRING_v12.0_119641_STRINGid_GO:0009210_Pyrimidine_ribonucleoside_triphosphate_catabolic_process


id: GO:0009211
description: Pyrimidine deoxyribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009211
golevel: 8
name:
  GOBP.STRING_v12.0_119641_STRINGid_GO:0009211_Pyrimidine_deoxyribonucleoside_triphosphate_metabolic_process


id: GO:0009212
description: Pyrimidine deoxyribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009212
golevel: 8
name:
  GOBP.STRING_v12.0_119641_STRINGid_GO:0009212_Pyrimidine_deoxyribonucleoside_triphosphate_biosynthetic_process


id: GO:0009213
description: Pyrimidine deoxyribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009213
golevel: 8
name:
  GOBP.STRING_v12.0_119641_STRINGid_GO:0009213_Pyrimidine_deoxyribonucleoside_triphosphate_catabolic_process


id: GO:0009215
description: Purine deoxyribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009215
golevel: 8
name:
  GOBP.STRING_v12.0_119641_STRINGid_GO:0009215_Purine_deoxyribonucleoside_triphosphate_metabolic_process


id: GO:0009217
description: Purine deoxyribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009217
golevel: 8
name:
  GOBP.STRING_v12.0_119641_STRINGid_GO:0009217_Purine_deoxyribonucleoside_triphosphate_catabolic_process


id: GO:0009401
description: Phosphoenolpyruvate-dependent sugar phosphotransferase system
memo: https://amigo.geneontology.org/amigo/term/GO:0009401
golevel: 5
name:
  GOBP.STRING_v12.0_119641_STRINGid_GO:0009401_Phosphoenolpyruvate-dependent_sugar_phosphotransferase_system


id: GO:0009678
description: Pyrophosphate hydrolysis-driven proton transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0009678
golevel: 5
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0009678_Pyrophosphate_hydrolysis-driven_proton_transmembrane_transporter_activity


id: GO:0010557
description: Positive regulation of macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010557
golevel: 7
name:
  GOBP.STRING_v12.0_119641_STRINGid_GO:0010557_Positive_regulation_of_macromolecule_biosynthetic_process


id: GO:0010558
description: Negative regulation of macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010558
golevel: 7
name:
  GOBP.STRING_v12.0_119641_STRINGid_GO:0010558_Negative_regulation_of_macromolecule_biosynthetic_process


id: GO:0015318
description: Inorganic molecular entity transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015318
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0015318_Inorganic_molecular_entity_transmembrane_transporter_activity


id: GO:0015415
description: ATPase-coupled phosphate ion transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015415
golevel: 3
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0015415_ATPase-coupled_phosphate_ion_transmembrane_transporter_activity


id: GO:0015453
description: Oxidoreduction-driven active transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015453
golevel: 5
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0015453_Oxidoreduction-driven_active_transmembrane_transporter_activity


id: GO:0015651
description: Quaternary ammonium group transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015651
golevel: 3
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0015651_Quaternary_ammonium_group_transmembrane_transporter_activity


id: GO:0015658
description: Branched-chain amino acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015658
golevel: 4
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0015658_Branched-chain_amino_acid_transmembrane_transporter_activity


id: GO:0015667
description: Site-specific DNA-methyltransferase (cytosine-N4-specific) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015667
golevel: 5
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0015667_Site-specific_DNA-methyltransferase_(cytosine-N4-specific)_activity


id: GO:0015932
description: Nucleobase-containing compound transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015932
golevel: 3
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0015932_Nucleobase-containing_compound_transmembrane_transporter_activity


id: GO:0016614
description: Oxidoreductase activity, acting on CH-OH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016614
golevel: 3
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0016614_Oxidoreductase_activity,_acting_on_CH-OH_group_of_donors


id: GO:0016616
description: Oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016616
golevel: 4
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0016616_Oxidoreductase_activity,_acting_on_the_CH-OH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016620
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016620
golevel: 4
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0016620_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016627
description: Oxidoreductase activity, acting on the CH-CH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016627
golevel: 3
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0016627_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors


id: GO:0016628
description: Oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016628
golevel: 4
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0016628_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016634
description: Oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016634
golevel: 4
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0016634_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_oxygen_as_acceptor


id: GO:0016635
memo: https://amigo.geneontology.org/amigo/term/GO:0016635
golevel: 4
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0016635_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_quinone_or_related_compound_as_acceptor

description:
  Oxidoreductase activity, acting on the CH-CH group of donors, quinone or related compound as acceptor


id: GO:0016638
description: Oxidoreductase activity, acting on the CH-NH2 group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016638
golevel: 3
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0016638_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors


id: GO:0016639
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016639
golevel: 4
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0016639_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016641
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016641
golevel: 4
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0016641_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_oxygen_as_acceptor


id: GO:0016645
description: Oxidoreductase activity, acting on the CH-NH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016645
golevel: 3
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0016645_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors


id: GO:0016646
description: Oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016646
golevel: 4
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0016646_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016647
description: Oxidoreductase activity, acting on the CH-NH group of donors, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016647
golevel: 4
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0016647_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors,_oxygen_as_acceptor


id: GO:0016652
description: Oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016652
golevel: 4
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0016652_Oxidoreductase_activity,_acting_on_NAD(P)H,_NAD(P)_as_acceptor


id: GO:0016655
description: Oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016655
golevel: 4
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0016655_Oxidoreductase_activity,_acting_on_NAD(P)H,_quinone_or_similar_compound_as_acceptor


id: GO:0016657
description: Oxidoreductase activity, acting on NAD(P)H, nitrogenous group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016657
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0016657_Oxidoreductase_activity,_acting_on_NAD(P)H,_nitrogenous_group_as_acceptor


id: GO:0016661
description: Oxidoreductase activity, acting on other nitrogenous compounds as donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016661
golevel: 3
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0016661_Oxidoreductase_activity,_acting_on_other_nitrogenous_compounds_as_donors


id: GO:0016667
description: Oxidoreductase activity, acting on a sulfur group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016667
golevel: 3
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0016667_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors


id: GO:0016668
description: Oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016668
golevel: 4
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0016668_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_NAD(P)_as_acceptor


id: GO:0016671
description: Oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016671
golevel: 4
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0016671_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_disulfide_as_acceptor


id: GO:0016684
description: Oxidoreductase activity, acting on peroxide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016684
golevel: 3
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0016684_Oxidoreductase_activity,_acting_on_peroxide_as_acceptor


id: GO:0016699
description: Oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016699
golevel: 4
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0016699_Oxidoreductase_activity,_acting_on_hydrogen_as_donor,_iron-sulfur_protein_as_acceptor


id: GO:0016701
description: Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen
memo: https://amigo.geneontology.org/amigo/term/GO:0016701
golevel: 3
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0016701_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen


id: GO:0016702
memo: https://amigo.geneontology.org/amigo/term/GO:0016702
golevel: 4
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0016702_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen,_incorporation_of_two_atoms_of_oxygen

description:
  Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen


id: GO:0016703
memo: https://amigo.geneontology.org/amigo/term/GO:0016703
golevel: 4
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0016703_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen,_incorporation_of_one_atom_of_oxygen_(internal_monooxygenases_or_internal_mixed_function_oxidases)

description:
  Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)


id: GO:0016705
memo: https://amigo.geneontology.org/amigo/term/GO:0016705
golevel: 3
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0016705_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen


id: GO:0016708
memo: https://amigo.geneontology.org/amigo/term/GO:0016708
golevel: 4
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0016708_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen,_NAD(P)H_as_one_donor,_and_incorporation_of_two_atoms_of_oxygen_into_one_donor

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor


id: GO:0016716
memo: https://amigo.geneontology.org/amigo/term/GO:0016716
golevel: 4
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0016716_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen,_another_compound_as_one_donor,_and_incorporation_of_one_atom_of_oxygen

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, another compound as one donor, and incorporation of one atom of oxygen


id: GO:0016721
description: Oxidoreductase activity, acting on superoxide radicals as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016721
golevel: 3
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0016721_Oxidoreductase_activity,_acting_on_superoxide_radicals_as_acceptor


id: GO:0016726
description: Oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016726
golevel: 4
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0016726_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_NAD_or_NADP_as_acceptor


id: GO:0016728
description: Oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016728
golevel: 4
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0016728_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_disulfide_as_acceptor


id: GO:0016742
description: Hydroxymethyl-, formyl- and related transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0016742
golevel: 4
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0016742_Hydroxymethyl-,_formyl-_and_related_transferase_activity


id: GO:0016747
description: Acyltransferase activity, transferring groups other than amino-acyl groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016747
golevel: 4
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0016747_Acyltransferase_activity,_transferring_groups_other_than_amino-acyl_groups


id: GO:0016765
description: Transferase activity, transferring alkyl or aryl (other than methyl) groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016765
golevel: 3
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0016765_Transferase_activity,_transferring_alkyl_or_aryl_(other_than_methyl)_groups


id: GO:0016772
description: Transferase activity, transferring phosphorus-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016772
golevel: 3
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0016772_Transferase_activity,_transferring_phosphorus-containing_groups


id: GO:0016774
description: Phosphotransferase activity, carboxyl group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016774
golevel: 4
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0016774_Phosphotransferase_activity,_carboxyl_group_as_acceptor


id: GO:0016775
description: Phosphotransferase activity, nitrogenous group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016775
golevel: 4
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0016775_Phosphotransferase_activity,_nitrogenous_group_as_acceptor


id: GO:0016776
description: Phosphotransferase activity, phosphate group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016776
golevel: 4
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0016776_Phosphotransferase_activity,_phosphate_group_as_acceptor


id: GO:0016780
description: Phosphotransferase activity, for other substituted phosphate groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016780
golevel: 4
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0016780_Phosphotransferase_activity,_for_other_substituted_phosphate_groups


id: GO:0016782
description: Transferase activity, transferring sulphur-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016782
golevel: 3
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0016782_Transferase_activity,_transferring_sulphur-containing_groups


id: GO:0016796
memo: https://amigo.geneontology.org/amigo/term/GO:0016796
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0016796_Exonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_5-phosphomonoesters

description:
  Exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5-phosphomonoesters


id: GO:0016810
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
memo: https://amigo.geneontology.org/amigo/term/GO:0016810
golevel: 3
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0016810_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds


id: GO:0016811
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
memo: https://amigo.geneontology.org/amigo/term/GO:0016811
golevel: 4
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0016811_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_linear_amides


id: GO:0016812
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
memo: https://amigo.geneontology.org/amigo/term/GO:0016812
golevel: 4
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0016812_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_cyclic_amides


id: GO:0016813
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines
memo: https://amigo.geneontology.org/amigo/term/GO:0016813
golevel: 4
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0016813_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_linear_amidines


id: GO:0016814
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines
memo: https://amigo.geneontology.org/amigo/term/GO:0016814
golevel: 4
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0016814_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_cyclic_amidines


id: GO:0016818
description: Hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
memo: https://amigo.geneontology.org/amigo/term/GO:0016818
golevel: 4
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0016818_Hydrolase_activity,_acting_on_acid_anhydrides,_in_phosphorus-containing_anhydrides


id: GO:0016823
description: Hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances
memo: https://amigo.geneontology.org/amigo/term/GO:0016823
golevel: 4
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0016823_Hydrolase_activity,_acting_on_acid_carbon-carbon_bonds,_in_ketonic_substances


id: GO:0016837
description: Carbon-oxygen lyase activity, acting on polysaccharides
memo: https://amigo.geneontology.org/amigo/term/GO:0016837
golevel: 4
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0016837_Carbon-oxygen_lyase_activity,_acting_on_polysaccharides


id: GO:0016855
description: Racemase and epimerase activity, acting on amino acids and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0016855
golevel: 4
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0016855_Racemase_and_epimerase_activity,_acting_on_amino_acids_and_derivatives


id: GO:0016857
description: Racemase and epimerase activity, acting on carbohydrates and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0016857
golevel: 4
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0016857_Racemase_and_epimerase_activity,_acting_on_carbohydrates_and_derivatives


id: GO:0016861
description: Intramolecular oxidoreductase activity, interconverting aldoses and ketoses
memo: https://amigo.geneontology.org/amigo/term/GO:0016861
golevel: 4
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0016861_Intramolecular_oxidoreductase_activity,_interconverting_aldoses_and_ketoses


id: GO:0016863
description: Intramolecular oxidoreductase activity, transposing C=C bonds
memo: https://amigo.geneontology.org/amigo/term/GO:0016863
golevel: 4
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0016863_Intramolecular_oxidoreductase_activity,_transposing_C=C_bonds


id: GO:0016867
description: Intramolecular transferase activity, transferring acyl groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016867
golevel: 4
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0016867_Intramolecular_transferase_activity,_transferring_acyl_groups


id: GO:0016868
description: Intramolecular transferase activity, phosphotransferases
memo: https://amigo.geneontology.org/amigo/term/GO:0016868
golevel: 4
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0016868_Intramolecular_transferase_activity,_phosphotransferases


id: GO:0016869
description: Intramolecular transferase activity, transferring amino groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016869
golevel: 4
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0016869_Intramolecular_transferase_activity,_transferring_amino_groups


id: GO:0016884
description: Carbon-nitrogen ligase activity, with glutamine as amido-N-donor
memo: https://amigo.geneontology.org/amigo/term/GO:0016884
golevel: 4
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0016884_Carbon-nitrogen_ligase_activity,_with_glutamine_as_amido-N-donor


id: GO:0016888
description: Endodeoxyribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016888
golevel: 4
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0016888_Endodeoxyribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016891
description: Endoribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016891
golevel: 4
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0016891_Endoribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016893
memo: https://amigo.geneontology.org/amigo/term/GO:0016893
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0016893_Endonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_5-phosphomonoesters

description:
  Endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5-phosphomonoesters


id: GO:0016895
description: Exodeoxyribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016895
golevel: 6
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0016895_Exodeoxyribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016896
description: Exoribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016896
golevel: 6
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0016896_Exoribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016903
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016903
golevel: 3
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0016903_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors


id: GO:0017183
description: Peptidyl-diphthamide biosynthetic process from peptidyl-histidine
memo: https://amigo.geneontology.org/amigo/term/GO:0017183
golevel: 8
name:
  GOBP.STRING_v12.0_119641_STRINGid_GO:0017183_Peptidyl-diphthamide_biosynthetic_process_from_peptidyl-histidine


id: GO:0018339
description: peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid
memo: https://amigo.geneontology.org/amigo/term/GO:0018339
golevel: 8
name:
  GOBP.STRING_v12.0_119641_STRINGid_GO:0018339_peptidyl-L-beta-methylthioaspartic_acid_biosynthetic_process_from_peptidyl-aspartic_acid


id: GO:0019171
description: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0019171
golevel: 5
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0019171_3-hydroxyacyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0019219
description: Regulation of nucleobase-containing compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0019219
golevel: 6
name:
  GOBP.STRING_v12.0_119641_STRINGid_GO:0019219_Regulation_of_nucleobase-containing_compound_metabolic_process


id: GO:0019279
description: L-methionine biosynthetic process from L-homoserine via cystathionine
memo: https://amigo.geneontology.org/amigo/term/GO:0019279
golevel: 6
name:
  GOBP.STRING_v12.0_119641_STRINGid_GO:0019279_L-methionine_biosynthetic_process_from_L-homoserine_via_cystathionine


id: GO:0019281
description: L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
memo: https://amigo.geneontology.org/amigo/term/GO:0019281
golevel: 7
name:
  GOBP.STRING_v12.0_119641_STRINGid_GO:0019281_L-methionine_biosynthetic_process_from_homoserine_via_O-succinyl-L-homoserine_and_cystathionine


id: GO:0019288
description: Isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
memo: https://amigo.geneontology.org/amigo/term/GO:0019288
golevel: 5
name:
  GOBP.STRING_v12.0_119641_STRINGid_GO:0019288_Isopentenyl_diphosphate_biosynthetic_process,_methylerythritol_4-phosphate_pathway


id: GO:0019829
description: ATPase-coupled cation transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0019829
golevel: 3
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0019829_ATPase-coupled_cation_transmembrane_transporter_activity


id: GO:0022877
description: protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0022877
golevel: 5
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0022877_protein-N(PI)-phosphohistidine-fructose_phosphotransferase_system_transporter_activity


id: GO:0030604
description: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0030604
golevel: 5
name:
  GOMF.STRING_v12.0_119641_STRINGid_GO:0030604_1-deoxy-D-xylulose-5-phosphate_reductoisomerase_activity


