# geneInfo

ensembl_gene_id: GCA_000308195_00043
symbol: C7440_3131
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the decarboxylation of carboxynorspermidine and carboxyspermidine; Belongs to the Orn/Lys/Arg decarboxylase class-II family. NspC subfamily.


ensembl_gene_id: GCA_000308195_00056
symbol: C7440_3117
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the reversible NADPH-dependent reductive amination of L-2-amino-6-oxopimelate, the acyclic form of L- tetrahydrodipicolinate, to generate the meso compound, D,L-2,6- diaminopimelate.


ensembl_gene_id: GCA_000308195_00080
symbol: trpD
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).


ensembl_gene_id: GCA_000308195_00116
symbol: C7440_0290
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate.


ensembl_gene_id: GCA_000308195_00121
symbol: ahcY
gene_biotype: protein_coding
description:
  Unannotated protein; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.


ensembl_gene_id: GCA_000308195_00123
symbol: ntrC
gene_biotype: protein_coding
description:
  Unannotated protein; Member of the two-component regulatory system NtrB/NtrC, which controls expression of the nitrogen-regulated (ntr) genes in response to nitrogen limitation. Phosphorylated NtrC binds directly to DNA and stimulates the formation of open promoter-sigma54-RNA polymerase complexes.


ensembl_gene_id: GCA_000308195_00126
symbol: C7440_3729
gene_biotype: protein_coding
description:
  Unannotated protein; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: GCA_000308195_00127
symbol: C7440_3728
gene_biotype: protein_coding
description:
  Unannotated protein; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.


ensembl_gene_id: GCA_000308195_00128
symbol: rph
gene_biotype: protein_coding
description:
  Unannotated protein; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation.


ensembl_gene_id: GCA_000308195_00131
symbol: C7440_3724
gene_biotype: protein_coding
description:
  Unannotated protein; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family.


ensembl_gene_id: GCA_000308195_00144
symbol: dnaE2
gene_biotype: protein_coding
description:
  Unannotated protein; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase.


ensembl_gene_id: GCA_000308195_00167
symbol: C7440_3688
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.


ensembl_gene_id: GCA_000308195_00177
symbol: ihfA
gene_biotype: protein_coding
description:
  Unannotated protein; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family.


ensembl_gene_id: GCA_000308195_00178
symbol: pheT
gene_biotype: protein_coding
description:
  Unannotated protein; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.


ensembl_gene_id: GCA_000308195_00179
symbol: pheS
gene_biotype: protein_coding
description:
  Unannotated protein; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.


ensembl_gene_id: GCA_000308195_00180
symbol: rplT
gene_biotype: protein_coding
description:
  Unannotated protein; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.


ensembl_gene_id: GCA_000308195_00191
symbol: C7440_3663
gene_biotype: protein_coding
description:
  Unannotated protein; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr).


ensembl_gene_id: GCA_000308195_00195
symbol: infC
gene_biotype: protein_coding
description:
  Unannotated protein; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.


ensembl_gene_id: GCA_000308195_00196
symbol: thrS
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr).


ensembl_gene_id: GCA_000308195_00197
symbol: potA
gene_biotype: protein_coding
description:
  Unannotated protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.


ensembl_gene_id: GCA_000308195_00209
symbol: C7440_3644
gene_biotype: protein_coding
description:
  Unannotated protein; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).


ensembl_gene_id: GCA_000308195_00219
symbol: prpB
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. Belongs to the isocitrate lyase/PEP mutase superfamily. Methylisocitrate lyase family.


ensembl_gene_id: GCA_000308195_00221
symbol: purT
gene_biotype: protein_coding
description:
  Unannotated protein; Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate; Belongs to the PurK/PurT family.


ensembl_gene_id: GCA_000308195_00248
symbol: groS
gene_biotype: protein_coding
description:
  Unannotated protein; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.


ensembl_gene_id: GCA_000308195_00249
symbol: groL
gene_biotype: protein_coding
description:
  Unannotated protein; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.


ensembl_gene_id: GCA_000308195_00250
symbol: C7440_1464
gene_biotype: protein_coding
description:
  Unannotated protein; Recycling of diacylglycerol produced during the turnover of membrane phospholipid.


ensembl_gene_id: GCA_000308195_00253
symbol: C7440_1467
gene_biotype: protein_coding
description:
  Unannotated protein; Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG).


ensembl_gene_id: GCA_000308195_00254
symbol: thiL
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family.


ensembl_gene_id: GCA_000308195_00255
symbol: nusB
gene_biotype: protein_coding
description:
  Unannotated protein; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.


ensembl_gene_id: GCA_000308195_00256
symbol: ribH
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.


ensembl_gene_id: GCA_000308195_00257
symbol: ribB
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.


ensembl_gene_id: GCA_000308195_00259
symbol: ftsY
gene_biotype: protein_coding
description:
  Unannotated protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components.


ensembl_gene_id: GCA_000308195_00261
symbol: coaD
gene_biotype: protein_coding
description:
  Unannotated protein; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.


ensembl_gene_id: GCA_000308195_00272
symbol: pnp
gene_biotype: protein_coding
description:
  Unannotated protein; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.


ensembl_gene_id: GCA_000308195_00273
symbol: rpsO
gene_biotype: protein_coding
description:
  Unannotated protein; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.


ensembl_gene_id: GCA_000308195_00276
symbol: psd
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).


ensembl_gene_id: GCA_000308195_00277
symbol: ilvC
gene_biotype: protein_coding
description:
  Unannotated protein; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate.


ensembl_gene_id: GCA_000308195_00293
symbol: C7440_2475
gene_biotype: protein_coding
description:
  Unannotated protein; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.


ensembl_gene_id: GCA_000308195_00305
symbol: C7440_2487
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the conversion of acetaldehyde to acetyl-CoA, using NAD(+) and coenzyme A. Is the final enzyme in the meta-cleavage pathway for the degradation of aromatic compounds.


ensembl_gene_id: GCA_000308195_00306
symbol: C7440_2488
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the retro-aldol cleavage of 4-hydroxy-2- oxopentanoate to pyruvate and acetaldehyde. Is involved in the meta- cleavage pathway for the degradation of aromatic compounds. Belongs to the 4-hydroxy-2-oxovalerate aldolase family.


ensembl_gene_id: GCA_000308195_00316
symbol: C7440_2498
gene_biotype: protein_coding
description:
  Unannotated protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: GCA_000308195_00317
symbol: bioF
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the decarboxylative condensation of pimeloyl-[acyl- carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide.


ensembl_gene_id: GCA_000308195_00318
symbol: bioD
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring.


ensembl_gene_id: GCA_000308195_00320
symbol: C7440_2502
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol; Belongs to the phospholipase D family. Cardiolipin synthase subfamily.


ensembl_gene_id: GCA_000308195_00334
symbol: C7440_2523
gene_biotype: protein_coding
description:
  Unannotated protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: GCA_000308195_00349
symbol: glgE
gene_biotype: protein_coding
description:
  Unannotated protein; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB.


ensembl_gene_id: GCA_000308195_00351
symbol: glgB
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.


ensembl_gene_id: GCA_000308195_00358
symbol: dapA
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).


ensembl_gene_id: GCA_000308195_00361
symbol: cysG
gene_biotype: protein_coding
description:
  Unannotated protein; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme. Belongs to the precorrin methyltransferase family.  In the N-terminal section; belongs to the precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase family.


ensembl_gene_id: GCA_000308195_00362
symbol: cysI
gene_biotype: protein_coding
description:
  Unannotated protein; Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L-cysteine from sulfate. Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.


ensembl_gene_id: GCA_000308195_00363
symbol: C7440_2552
gene_biotype: protein_coding
description:
  Unannotated protein; Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L-cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH -> FAD -> FMN to the hemoprotein component.


ensembl_gene_id: GCA_000308195_00365
symbol: mutS
gene_biotype: protein_coding
description:
  Unannotated protein; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.


ensembl_gene_id: GCA_000308195_00397
symbol: uppP
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.


ensembl_gene_id: GCA_000308195_00398
symbol: lpxH
gene_biotype: protein_coding
description:
  Unannotated protein; Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: GCA_000308195_00399
symbol: C7440_2590
gene_biotype: protein_coding
description:
  Unannotated protein; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.


ensembl_gene_id: GCA_000308195_00403
symbol: accA
gene_biotype: protein_coding
description:
  Unannotated protein; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.


ensembl_gene_id: GCA_000308195_00404
symbol: tilS
gene_biotype: protein_coding
description:
  Unannotated protein; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.


ensembl_gene_id: GCA_000308195_00447
symbol: C7440_2631
gene_biotype: protein_coding
description:
  Unannotated protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.


ensembl_gene_id: GCA_000308195_00452
symbol: kynU
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively.


ensembl_gene_id: GCA_000308195_00484
symbol: C7440_2375
gene_biotype: protein_coding
description:
  Unannotated protein; Hydrolysis of phosphatidylcholine with phospholipase A2 (EC 3.1.1.4) and phospholipase A1 (EC 3.1.1.32) activities. Belongs to the phospholipase A1 family.


ensembl_gene_id: GCA_000308195_00557
symbol: gltS
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the sodium-dependent transport of glutamate. Belongs to the glutamate:Na(+) symporter (ESS) (TC 2.A.27) family.


ensembl_gene_id: GCA_000308195_00563
symbol: tpm
gene_biotype: protein_coding
description:
  Unannotated protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. TPMT family.


ensembl_gene_id: GCA_000308195_00569
symbol: C7440_1855
gene_biotype: protein_coding
description:
  Unannotated protein; Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety; Belongs to the PagL family.


ensembl_gene_id: GCA_000308195_00572
symbol: pyrE
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).


ensembl_gene_id: GCA_000308195_00607
symbol: hutG
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the conversion of N-formimidoyl-L-glutamate to L- glutamate and formamide; Belongs to the arginase family.


ensembl_gene_id: GCA_000308195_00611
symbol: C7440_1889
gene_biotype: protein_coding
description:
  Unannotated protein; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: GCA_000308195_00625
symbol: rsmG
gene_biotype: protein_coding
description:
  Unannotated protein; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA.


ensembl_gene_id: GCA_000308195_00626
symbol: mnmG
gene_biotype: protein_coding
description:
  Unannotated protein; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.


ensembl_gene_id: GCA_000308195_00634
symbol: mnmE
gene_biotype: protein_coding
description:
  Unannotated protein; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.


ensembl_gene_id: GCA_000308195_00636
symbol: yidC
gene_biotype: protein_coding
description:
  Unannotated protein; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins.


ensembl_gene_id: GCA_000308195_00637
symbol: C7440_3467
gene_biotype: protein_coding
description:
  Unannotated protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.


ensembl_gene_id: GCA_000308195_00638
symbol: rnpA
gene_biotype: protein_coding
description:
  Unannotated protein; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.


ensembl_gene_id: GCA_000308195_00639
symbol: dnaA
gene_biotype: protein_coding
description:
  Unannotated protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.


ensembl_gene_id: GCA_000308195_00640
symbol: C7440_3463
gene_biotype: protein_coding
description:
  Unannotated protein; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of replication  [...]


ensembl_gene_id: GCA_000308195_00641
symbol: gyrB
gene_biotype: protein_coding
description:
  Unannotated protein; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: GCA_000308195_00671
symbol: nbaC
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the oxidative ring opening of 3-hydroxyanthranilate to 2-amino-3-carboxymuconate semialdehyde, which spontaneously cyclizes to quinolinate.


ensembl_gene_id: GCA_000308195_00678
symbol: selA
gene_biotype: protein_coding
description:
  Unannotated protein; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis.


ensembl_gene_id: GCA_000308195_00709
symbol: mhpB
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the non-heme iron(II)-dependent oxidative cleavage of 2,3-dihydroxyphenylpropionic acid and 2,3-dihydroxicinnamic acid into 2-hydroxy-6-ketononadienedioate and 2-hydroxy-6- ketononatrienedioate, respectively; Belongs to the LigB/MhpB extradiol dioxygenase family.


ensembl_gene_id: GCA_000308195_00734
symbol: C7440_2186
gene_biotype: protein_coding
description:
  Unannotated protein; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.


ensembl_gene_id: GCA_000308195_00736
symbol: mscL
gene_biotype: protein_coding
description:
  Unannotated protein; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell.


ensembl_gene_id: GCA_000308195_00739
symbol: tatC
gene_biotype: protein_coding
description:
  Unannotated protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides.


ensembl_gene_id: GCA_000308195_00740
symbol: tatB
gene_biotype: protein_coding
description:
  Unannotated protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation.


ensembl_gene_id: GCA_000308195_00741
symbol: tatA
gene_biotype: protein_coding
description:
  Unannotated protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.


ensembl_gene_id: GCA_000308195_00744
symbol: hisF
gene_biotype: protein_coding
description:
  Unannotated protein; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.


ensembl_gene_id: GCA_000308195_00746
symbol: hisH
gene_biotype: protein_coding
description:
  Unannotated protein; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.


ensembl_gene_id: GCA_000308195_00748
symbol: hisD
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.


ensembl_gene_id: GCA_000308195_00749
symbol: hisG
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Short subfamily.


ensembl_gene_id: GCA_000308195_00750
symbol: murA
gene_biotype: protein_coding
description:
  Unannotated protein; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.


ensembl_gene_id: GCA_000308195_00783
symbol: C7440_2137
gene_biotype: protein_coding
description:
  Unannotated protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family.


ensembl_gene_id: GCA_000308195_00787
symbol: rpoH
gene_biotype: protein_coding
description:
  Unannotated protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes.


ensembl_gene_id: GCA_000308195_00789
symbol: ctaB
gene_biotype: protein_coding
description:
  Unannotated protein; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.


ensembl_gene_id: GCA_000308195_00805
symbol: ubiG
gene_biotype: protein_coding
description:
  Unannotated protein; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family.


ensembl_gene_id: GCA_000308195_00808
symbol: serC
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily.


ensembl_gene_id: GCA_000308195_00811
symbol: aroA
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.


ensembl_gene_id: GCA_000308195_00813
symbol: C7440_1353
gene_biotype: protein_coding
description:
  Unannotated protein; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence.


ensembl_gene_id: GCA_000308195_00816
symbol: lapB
gene_biotype: protein_coding
description:
  Unannotated protein; Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane; Belongs to the LapB family.


ensembl_gene_id: GCA_000308195_00818
symbol: hldD
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the interconversion between ADP-D-glycero-beta-D- manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose; Belongs to the NAD(P)-dependent epimerase/dehydratase family. HldD subfamily.


ensembl_gene_id: GCA_000308195_00836
symbol: rplS
gene_biotype: protein_coding
description:
  Unannotated protein; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.


ensembl_gene_id: GCA_000308195_00838
symbol: rsgA
gene_biotype: protein_coding
description:
  Unannotated protein; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.


ensembl_gene_id: GCA_000308195_00840
symbol: orn
gene_biotype: protein_coding
description:
  Unannotated protein; 3'-to-5' exoribonuclease specific for small oligoribonucleotides; Belongs to the oligoribonuclease family.


ensembl_gene_id: GCA_000308195_00842
symbol: acpS
gene_biotype: protein_coding
description:
  Unannotated protein; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family.


ensembl_gene_id: GCA_000308195_00843
symbol: nagZ
gene_biotype: protein_coding
description:
  Unannotated protein; Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide- linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N- acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides. Belongs to the glycosyl hydrolase 3 family. NagZ subfamily.


ensembl_gene_id: GCA_000308195_00844
symbol: uvrC
gene_biotype: protein_coding
description:
  Unannotated protein; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.


ensembl_gene_id: GCA_000308195_00847
symbol: queF
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1).


ensembl_gene_id: GCA_000308195_00861
symbol: recA
gene_biotype: protein_coding
description:
  Unannotated protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.


ensembl_gene_id: GCA_000308195_00864
symbol: metE
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family.


ensembl_gene_id: GCA_000308195_00866
symbol: sucC
gene_biotype: protein_coding
description:
  Unannotated protein; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.


ensembl_gene_id: GCA_000308195_00867
symbol: sucD
gene_biotype: protein_coding
description:
  Unannotated protein; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.


ensembl_gene_id: GCA_000308195_00870
symbol: hemC
gene_biotype: protein_coding
description:
  Unannotated protein; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.


ensembl_gene_id: GCA_000308195_00871
symbol: C7440_2952
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.


ensembl_gene_id: GCA_000308195_00874
symbol: ppa
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.


ensembl_gene_id: GCA_000308195_00886
symbol: greB
gene_biotype: protein_coding
description:
  Unannotated protein; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length.


ensembl_gene_id: GCA_000308195_00887
symbol: purL
gene_biotype: protein_coding
description:
  Unannotated protein; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate.


ensembl_gene_id: GCA_000308195_00888
symbol: guaB
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.


ensembl_gene_id: GCA_000308195_00915
symbol: kynA
gene_biotype: protein_coding
description:
  Unannotated protein; Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety.


ensembl_gene_id: GCA_000308195_00924
symbol: C7440_2898
gene_biotype: protein_coding
description:
  Unannotated protein; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.


ensembl_gene_id: GCA_000308195_00925
symbol: C7440_2897
gene_biotype: protein_coding
description:
  Unannotated protein; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).


ensembl_gene_id: GCA_000308195_00946
symbol: nnrE
gene_biotype: protein_coding
description:
  Unannotated protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration.  Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epim [...]


ensembl_gene_id: GCA_000308195_00948
symbol: tadA
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: GCA_000308195_00963
symbol: C7440_2859
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions.


ensembl_gene_id: GCA_000308195_00970
symbol: tsaD
gene_biotype: protein_coding
description:
  Unannotated protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.


ensembl_gene_id: GCA_000308195_00971
symbol: plsY
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.


ensembl_gene_id: GCA_000308195_00972
symbol: surE
gene_biotype: protein_coding
description:
  Unannotated protein; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.


ensembl_gene_id: GCA_000308195_00973
symbol: pcm
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins.


ensembl_gene_id: GCA_000308195_00977
symbol: rlmD
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. RlmD subfamily.


ensembl_gene_id: GCA_000308195_00982
symbol: nadE
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.


ensembl_gene_id: GCA_000308195_00993
symbol: C7440_2829
gene_biotype: protein_coding
description:
  Unannotated protein; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.


ensembl_gene_id: GCA_000308195_00994
symbol: rpoZ
gene_biotype: protein_coding
description:
  Unannotated protein; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.


ensembl_gene_id: GCA_000308195_01005
symbol: pdxJ
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate.


ensembl_gene_id: GCA_000308195_01010
symbol: folD
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.


ensembl_gene_id: GCA_000308195_01014
symbol: C7440_2808
gene_biotype: protein_coding
description:
  Unannotated protein; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).


ensembl_gene_id: GCA_000308195_01019
symbol: purF
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.


ensembl_gene_id: GCA_000308195_01045
symbol: glnD
gene_biotype: protein_coding
description:
  Unannotated protein; Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen metabolism.


ensembl_gene_id: GCA_000308195_01046
symbol: map
gene_biotype: protein_coding
description:
  Unannotated protein; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.


ensembl_gene_id: GCA_000308195_01048
symbol: tsf
gene_biotype: protein_coding
description:
  Unannotated protein; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.


ensembl_gene_id: GCA_000308195_01050
symbol: frr
gene_biotype: protein_coding
description:
  Unannotated protein; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.


ensembl_gene_id: GCA_000308195_01051
symbol: C7440_2766
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.


ensembl_gene_id: GCA_000308195_01053
symbol: dxr
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family.


ensembl_gene_id: GCA_000308195_01055
symbol: bamA
gene_biotype: protein_coding
description:
  Unannotated protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.


ensembl_gene_id: GCA_000308195_01057
symbol: lpxD
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily.


ensembl_gene_id: GCA_000308195_01058
symbol: fabZ
gene_biotype: protein_coding
description:
  Unannotated protein; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.


ensembl_gene_id: GCA_000308195_01059
symbol: lpxA
gene_biotype: protein_coding
description:
  Unannotated protein; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: GCA_000308195_01060
symbol: lpxB
gene_biotype: protein_coding
description:
  Unannotated protein; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: GCA_000308195_01071
symbol: C7440_2746
gene_biotype: protein_coding
description:
  Unannotated protein; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the phosphoenolpyruvate synthase (PEPS) by catalyzing its phosphorylation/dephosphorylation.


ensembl_gene_id: GCA_000308195_01072
symbol: C7440_2745
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family.


ensembl_gene_id: GCA_000308195_01082
symbol: C7440_2735
gene_biotype: protein_coding
description:
  Unannotated protein; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated.


ensembl_gene_id: GCA_000308195_01083
symbol: smpB
gene_biotype: protein_coding
description:
  Unannotated protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to  [...]


ensembl_gene_id: GCA_000308195_01088
symbol: mltG
gene_biotype: protein_coding
description:
  Unannotated protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation.


ensembl_gene_id: GCA_000308195_01089
symbol: tmk
gene_biotype: protein_coding
description:
  Unannotated protein; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.


ensembl_gene_id: GCA_000308195_01131
symbol: ku
gene_biotype: protein_coding
description:
  Unannotated protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.


ensembl_gene_id: GCA_000308195_01135
symbol: clsB
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol.


ensembl_gene_id: GCA_000308195_01175
symbol: C7440_3845
gene_biotype: protein_coding
description:
  Unannotated protein; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.


ensembl_gene_id: GCA_000308195_01209
symbol: fumC
gene_biotype: protein_coding
description:
  Unannotated protein; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.


ensembl_gene_id: GCA_000308195_01214
symbol: C7440_3884
gene_biotype: protein_coding
description:
  Unannotated protein; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage; Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily.


ensembl_gene_id: GCA_000308195_01218
symbol: recG
gene_biotype: protein_coding
description:
  Unannotated protein; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.


ensembl_gene_id: GCA_000308195_01246
symbol: hemA
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).


ensembl_gene_id: GCA_000308195_01247
symbol: prfA
gene_biotype: protein_coding
description:
  Unannotated protein; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.


ensembl_gene_id: GCA_000308195_01248
symbol: prmC
gene_biotype: protein_coding
description:
  Unannotated protein; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.


ensembl_gene_id: GCA_000308195_01250
symbol: ubiX
gene_biotype: protein_coding
description:
  Unannotated protein; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.


ensembl_gene_id: GCA_000308195_01251
symbol: ttcA
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine/cysteine desulfurase (IscS) system.


ensembl_gene_id: GCA_000308195_01252
symbol: C7440_0442
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.


ensembl_gene_id: GCA_000308195_01257
symbol: atpB
gene_biotype: protein_coding
description:
  Unannotated protein; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.


ensembl_gene_id: GCA_000308195_01258
symbol: atpE
gene_biotype: protein_coding
description:
  Unannotated protein; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: GCA_000308195_01259
symbol: atpF
gene_biotype: protein_coding
description:
  Unannotated protein; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.


ensembl_gene_id: GCA_000308195_01261
symbol: atpA
gene_biotype: protein_coding
description:
  Unannotated protein; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.


ensembl_gene_id: GCA_000308195_01262
symbol: atpG
gene_biotype: protein_coding
description:
  Unannotated protein; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.


ensembl_gene_id: GCA_000308195_01263
symbol: atpD
gene_biotype: protein_coding
description:
  Unannotated protein; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.


ensembl_gene_id: GCA_000308195_01264
symbol: atpC
gene_biotype: protein_coding
description:
  Unannotated protein; Produces ATP from ADP in the presence of a proton gradient across the membrane.


ensembl_gene_id: GCA_000308195_01283
symbol: hemE
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.


ensembl_gene_id: GCA_000308195_01284
symbol: priA
gene_biotype: protein_coding
description:
  Unannotated protein; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.


ensembl_gene_id: GCA_000308195_01285
symbol: rep
gene_biotype: protein_coding
description:
  Unannotated protein; Rep helicase is a single-stranded DNA-dependent ATPase involved in DNA replication; it can initiate unwinding at a nick in the DNA. It binds to the single-stranded DNA and acts in a progressive fashion along the DNA in the 3' to 5' direction.


ensembl_gene_id: GCA_000308195_01290
symbol: C7440_3265
gene_biotype: protein_coding
description:
  Unannotated protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.


ensembl_gene_id: GCA_000308195_01291
symbol: purN
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.


ensembl_gene_id: GCA_000308195_01293
symbol: ileS
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily.


ensembl_gene_id: GCA_000308195_01294
symbol: lspA
gene_biotype: protein_coding
description:
  Unannotated protein; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.


ensembl_gene_id: GCA_000308195_01295
symbol: C7440_3260
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.


ensembl_gene_id: GCA_000308195_01302
symbol: dut
gene_biotype: protein_coding
description:
  Unannotated protein; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family.


ensembl_gene_id: GCA_000308195_01307
symbol: clpS
gene_biotype: protein_coding
description:
  Unannotated protein; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.


ensembl_gene_id: GCA_000308195_01311
symbol: C7440_3244
gene_biotype: protein_coding
description:
  Unannotated protein; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.


ensembl_gene_id: GCA_000308195_01312
symbol: xseA
gene_biotype: protein_coding
description:
  Unannotated protein; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.


ensembl_gene_id: GCA_000308195_01315
symbol: lpxK
gene_biotype: protein_coding
description:
  Unannotated protein; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).


ensembl_gene_id: GCA_000308195_01317
symbol: kdsB
gene_biotype: protein_coding
description:
  Unannotated protein; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria.


ensembl_gene_id: GCA_000308195_01318
symbol: adk
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.


ensembl_gene_id: GCA_000308195_01320
symbol: murJ
gene_biotype: protein_coding
description:
  Unannotated protein; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.


ensembl_gene_id: GCA_000308195_01324
symbol: C7440_3231
gene_biotype: protein_coding
description:
  Unannotated protein; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.


ensembl_gene_id: GCA_000308195_01341
symbol: C7440_3199
gene_biotype: protein_coding
description:
  Unannotated protein; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: GCA_000308195_01343
symbol: cysA
gene_biotype: protein_coding
description:
  Unannotated protein; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system.


ensembl_gene_id: GCA_000308195_01354
symbol: kup
gene_biotype: protein_coding
description:
  Unannotated protein; Transport of potassium into the cell; Belongs to the HAK/KUP transporter (TC 2.A.72) family.


ensembl_gene_id: GCA_000308195_01359
symbol: C7440_3181
gene_biotype: protein_coding
description:
  Unannotated protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.


ensembl_gene_id: GCA_000308195_01366
symbol: C7440_3174
gene_biotype: protein_coding
description:
  Unannotated protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.


ensembl_gene_id: GCA_000308195_01408
symbol: C7440_0187
gene_biotype: protein_coding
description:
  Unannotated protein; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.


ensembl_gene_id: GCA_000308195_01410
symbol: C7440_0185
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family.


ensembl_gene_id: GCA_000308195_01412
symbol: C7440_0182
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.


ensembl_gene_id: GCA_000308195_01416
symbol: nadX
gene_biotype: protein_coding
description:
  Unannotated protein; Specifically catalyzes the NAD or NADP-dependent dehydrogenation of L-aspartate to iminoaspartate.


ensembl_gene_id: GCA_000308195_01466
symbol: aspS
gene_biotype: protein_coding
description:
  Unannotated protein; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.


ensembl_gene_id: GCA_000308195_01469
symbol: ubiA
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate.


ensembl_gene_id: GCA_000308195_01493
symbol: mdcB
gene_biotype: protein_coding
description:
  Unannotated protein; Involved in the formation of 2-(5''-phosphoribosyl)-3'- dephosphocoenzyme-A, the prosthetic group of the acyl-carrier protein of the malonate decarboxylase; Belongs to the CitG/MdcB family.


ensembl_gene_id: GCA_000308195_01522
symbol: ffh
gene_biotype: protein_coding
description:
  Unannotated protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components; Belongs to t [...]


ensembl_gene_id: GCA_000308195_01542
symbol: C7440_1535
gene_biotype: protein_coding
description:
  Unannotated protein; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.


ensembl_gene_id: GCA_000308195_01543
symbol: metG
gene_biotype: protein_coding
description:
  Unannotated protein; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.


ensembl_gene_id: GCA_000308195_01545
symbol: C7440_1532
gene_biotype: protein_coding
description:
  Unannotated protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.


ensembl_gene_id: GCA_000308195_01552
symbol: gcvH
gene_biotype: protein_coding
description:
  Unannotated protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.


ensembl_gene_id: GCA_000308195_01553
symbol: gcvP
gene_biotype: protein_coding
description:
  Unannotated protein; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.


ensembl_gene_id: GCA_000308195_01556
symbol: thyA
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis.


ensembl_gene_id: GCA_000308195_01558
symbol: coq7
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the hydroxylation of 2-nonaprenyl-3-methyl-6- methoxy-1,4-benzoquinol during ubiquinone biosynthesis.


ensembl_gene_id: GCA_000308195_01575
symbol: hmgA
gene_biotype: protein_coding
description:
  Unannotated protein; Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate.


ensembl_gene_id: GCA_000308195_01576
symbol: mutM
gene_biotype: protein_coding
description:
  Unannotated protein; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates.


ensembl_gene_id: GCA_000308195_01578
symbol: C7440_1499
gene_biotype: protein_coding
description:
  Unannotated protein; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein.


ensembl_gene_id: GCA_000308195_01579
symbol: ispE
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.


ensembl_gene_id: GCA_000308195_01581
symbol: prs
gene_biotype: protein_coding
description:
  Unannotated protein; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.


ensembl_gene_id: GCA_000308195_01582
symbol: rplY
gene_biotype: protein_coding
description:
  Unannotated protein; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.


ensembl_gene_id: GCA_000308195_01583
symbol: pth
gene_biotype: protein_coding
description:
  Unannotated protein; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.


ensembl_gene_id: GCA_000308195_01585
symbol: ychF
gene_biotype: protein_coding
description:
  Unannotated protein; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.


ensembl_gene_id: GCA_000308195_01595
symbol: C7440_1481
gene_biotype: protein_coding
description:
  Unannotated protein; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family.


ensembl_gene_id: GCA_000308195_01598
symbol: rpsJ
gene_biotype: protein_coding
description:
  Unannotated protein; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.


ensembl_gene_id: GCA_000308195_01600
symbol: C7440_3508
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia; Belongs to the metallo-dependent hydrolases superfamily. ATZ/TRZ family.


ensembl_gene_id: GCA_000308195_01601
symbol: rplC
gene_biotype: protein_coding
description:
  Unannotated protein; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.


ensembl_gene_id: GCA_000308195_01603
symbol: rplW
gene_biotype: protein_coding
description:
  Unannotated protein; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.


ensembl_gene_id: GCA_000308195_01604
symbol: rplB
gene_biotype: protein_coding
description:
  Unannotated protein; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.


ensembl_gene_id: GCA_000308195_01605
symbol: rpsS
gene_biotype: protein_coding
description:
  Unannotated protein; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.


ensembl_gene_id: GCA_000308195_01606
symbol: rplV
gene_biotype: protein_coding
description:
  Unannotated protein; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.


ensembl_gene_id: GCA_000308195_01607
symbol: rpsC
gene_biotype: protein_coding
description:
  Unannotated protein; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.


ensembl_gene_id: GCA_000308195_01608
symbol: rplP
gene_biotype: protein_coding
description:
  Unannotated protein; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.


ensembl_gene_id: GCA_000308195_01610
symbol: rpsQ
gene_biotype: protein_coding
description:
  Unannotated protein; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.


ensembl_gene_id: GCA_000308195_01618
symbol: leuC
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.


ensembl_gene_id: GCA_000308195_01619
symbol: leuD
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily.


ensembl_gene_id: GCA_000308195_01637
symbol: maiA
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes cis-trans isomerization of the C2-C3 double bond in maleate to yield fumarate.


ensembl_gene_id: GCA_000308195_01649
symbol: rplN
gene_biotype: protein_coding
description:
  Unannotated protein; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.


ensembl_gene_id: GCA_000308195_01650
symbol: rplX
gene_biotype: protein_coding
description:
  Unannotated protein; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.


ensembl_gene_id: GCA_000308195_01651
symbol: rplE
gene_biotype: protein_coding
description:
  Unannotated protein; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.


ensembl_gene_id: GCA_000308195_01652
symbol: rpsN
gene_biotype: protein_coding
description:
  Unannotated protein; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.


ensembl_gene_id: GCA_000308195_01653
symbol: rpsH
gene_biotype: protein_coding
description:
  Unannotated protein; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.


ensembl_gene_id: GCA_000308195_01654
symbol: rplF
gene_biotype: protein_coding
description:
  Unannotated protein; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.


ensembl_gene_id: GCA_000308195_01655
symbol: rplR
gene_biotype: protein_coding
description:
  Unannotated protein; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.


ensembl_gene_id: GCA_000308195_01656
symbol: rpsE
gene_biotype: protein_coding
description:
  Unannotated protein; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.


ensembl_gene_id: GCA_000308195_01659
symbol: secY
gene_biotype: protein_coding
description:
  Unannotated protein; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.


ensembl_gene_id: GCA_000308195_01660
symbol: infA
gene_biotype: protein_coding
description:
  Unannotated protein; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.


ensembl_gene_id: GCA_000308195_01662
symbol: rpsM
gene_biotype: protein_coding
description:
  Unannotated protein; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.


ensembl_gene_id: GCA_000308195_01663
symbol: rpsK
gene_biotype: protein_coding
description:
  Unannotated protein; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.


ensembl_gene_id: GCA_000308195_01664
symbol: rpsD
gene_biotype: protein_coding
description:
  Unannotated protein; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.


ensembl_gene_id: GCA_000308195_01665
symbol: rpoA
gene_biotype: protein_coding
description:
  Unannotated protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: GCA_000308195_01674
symbol: engB
gene_biotype: protein_coding
description:
  Unannotated protein; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.


ensembl_gene_id: GCA_000308195_01679
symbol: lysA
gene_biotype: protein_coding
description:
  Unannotated protein; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.


ensembl_gene_id: GCA_000308195_01681
symbol: cyaY
gene_biotype: protein_coding
description:
  Unannotated protein; Involved in iron-sulfur (Fe-S) cluster assembly. May act as a regulator of Fe-S biogenesis.


ensembl_gene_id: GCA_000308195_01683
symbol: aroK
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.


ensembl_gene_id: GCA_000308195_01684
symbol: aroB
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).


ensembl_gene_id: GCA_000308195_01694
symbol: uvrA
gene_biotype: protein_coding
description:
  Unannotated protein; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.


ensembl_gene_id: GCA_000308195_01696
symbol: C7440_0079
gene_biotype: protein_coding
description:
  Unannotated protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.


ensembl_gene_id: GCA_000308195_01713
symbol: der
gene_biotype: protein_coding
description:
  Unannotated protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.


ensembl_gene_id: GCA_000308195_01714
symbol: hisC
gene_biotype: protein_coding
description:
  Unannotated protein; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.


ensembl_gene_id: GCA_000308195_01715
symbol: hfq
gene_biotype: protein_coding
description:
  Unannotated protein; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family.


ensembl_gene_id: GCA_000308195_01716
symbol: hflX
gene_biotype: protein_coding
description:
  Unannotated protein; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.


ensembl_gene_id: GCA_000308195_01719
symbol: hisZ
gene_biotype: protein_coding
description:
  Unannotated protein; Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine.


ensembl_gene_id: GCA_000308195_01720
symbol: purA
gene_biotype: protein_coding
description:
  Unannotated protein; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.


ensembl_gene_id: GCA_000308195_01723
symbol: dnaG
gene_biotype: protein_coding
description:
  Unannotated protein; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.


ensembl_gene_id: GCA_000308195_01724
symbol: rpoD
gene_biotype: protein_coding
description:
  Unannotated protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.


ensembl_gene_id: GCA_000308195_01756
symbol: pckG
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle; Belongs to the phosphoenolpyruvate carboxykinase [GTP] family.


ensembl_gene_id: GCA_000308195_01859
symbol: mdh
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family.


ensembl_gene_id: GCA_000308195_01864
symbol: C7440_3538
gene_biotype: protein_coding
description:
  Unannotated protein; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.


ensembl_gene_id: GCA_000308195_01870
symbol: C7440_3545
gene_biotype: protein_coding
description:
  Unannotated protein; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2).


ensembl_gene_id: GCA_000308195_01873
symbol: trpS
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: GCA_000308195_01878
symbol: C7440_3553
gene_biotype: protein_coding
description:
  Unannotated protein; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: GCA_000308195_01886
symbol: C7440_3561
gene_biotype: protein_coding
description:
  Unannotated protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: GCA_000308195_01890
symbol: infB
gene_biotype: protein_coding
description:
  Unannotated protein; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.


ensembl_gene_id: GCA_000308195_01891
symbol: rbfA
gene_biotype: protein_coding
description:
  Unannotated protein; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.


ensembl_gene_id: GCA_000308195_01892
symbol: truB
gene_biotype: protein_coding
description:
  Unannotated protein; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.


ensembl_gene_id: GCA_000308195_01900
symbol: polA
gene_biotype: protein_coding
description:
  Unannotated protein; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.


ensembl_gene_id: GCA_000308195_01906
symbol: xseB
gene_biotype: protein_coding
description:
  Unannotated protein; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.


ensembl_gene_id: GCA_000308195_01908
symbol: dxs
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.


ensembl_gene_id: GCA_000308195_01911
symbol: priB
gene_biotype: protein_coding
description:
  Unannotated protein; Binds single-stranded DNA at the primosome assembly site (PAS); Belongs to the PriB family.


ensembl_gene_id: GCA_000308195_01912
symbol: rpsR
gene_biotype: protein_coding
description:
  Unannotated protein; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.


ensembl_gene_id: GCA_000308195_01914
symbol: C7440_3589
gene_biotype: protein_coding
description:
  Unannotated protein; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily.


ensembl_gene_id: GCA_000308195_01923
symbol: crcB
gene_biotype: protein_coding
description:
  Unannotated protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.


ensembl_gene_id: GCA_000308195_01928
symbol: C7440_3604
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.


ensembl_gene_id: GCA_000308195_01930
symbol: radA
gene_biotype: protein_coding
description:
  Unannotated protein; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.


ensembl_gene_id: GCA_000308195_01932
symbol: kdkA
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the ATP-dependent phosphorylation of the 3-deoxy-D- manno-octulosonic acid (Kdo) residue in Kdo-lipid IV(A) at the 4-OH position; Belongs to the protein kinase superfamily. KdkA/RfaP family.


ensembl_gene_id: GCA_000308195_01933
symbol: C7440_3609
gene_biotype: protein_coding
description:
  Unannotated protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.


ensembl_gene_id: GCA_000308195_01938
symbol: rpiA
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.


ensembl_gene_id: GCA_000308195_01940
symbol: C7440_3616
gene_biotype: protein_coding
description:
  Unannotated protein; Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes.


ensembl_gene_id: GCA_000308195_01952
symbol: msbA
gene_biotype: protein_coding
description:
  Unannotated protein; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation.


ensembl_gene_id: GCA_000308195_01957
symbol: argD
gene_biotype: protein_coding
description:
  Unannotated protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.


ensembl_gene_id: GCA_000308195_01958
symbol: glcB
gene_biotype: protein_coding
description:
  Unannotated protein; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.


ensembl_gene_id: GCA_000308195_01960
symbol: amn
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the hydrolysis of the N-glycosidic bond of AMP to form adenine and ribose 5-phosphate. Involved in regulation of AMP concentrations.


ensembl_gene_id: GCA_000308195_01963
symbol: gluQ
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5-dihydroxy-2- cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon; Belongs to the class-I aminoacyl-tRNA synthetase family. GluQ subfamily.


ensembl_gene_id: GCA_000308195_01966
symbol: aceK
gene_biotype: protein_coding
description:
  Unannotated protein; Bifunctional enzyme which can phosphorylate or dephosphorylate isocitrate dehydrogenase (IDH) on a specific serine residue. This is a regulatory mechanism which enables bacteria to bypass the Krebs cycle via the glyoxylate shunt in response to the source of carbon. When bacteria are grown on glucose, IDH is fully active and unphosphorylated, but when grown on acetate or ethanol, the activity of IDH declines drastically concomitant with its phosphorylation.


ensembl_gene_id: GCA_000308195_01968
symbol: bioB
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.


ensembl_gene_id: GCA_000308195_02003
symbol: lnt
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily.


ensembl_gene_id: GCA_000308195_02005
symbol: ybeY
gene_biotype: protein_coding
description:
  Unannotated protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.


ensembl_gene_id: GCA_000308195_02007
symbol: miaB
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.


ensembl_gene_id: GCA_000308195_02015
symbol: secF
gene_biotype: protein_coding
description:
  Unannotated protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: GCA_000308195_02017
symbol: yajC
gene_biotype: protein_coding
description:
  Unannotated protein; The SecYEG-SecDF-YajC-YidC holo-translocon (HTL) protein secretase/insertase is a supercomplex required for protein secretion, insertion of proteins into membranes, and assembly of membrane protein complexes. While the SecYEG complex is essential for assembly of a number of proteins and complexes, the SecDF-YajC-YidC subcomplex facilitates these functions.


ensembl_gene_id: GCA_000308195_02018
symbol: tgt
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product.  [...]


ensembl_gene_id: GCA_000308195_02019
symbol: queA
gene_biotype: protein_coding
description:
  Unannotated protein; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).


ensembl_gene_id: GCA_000308195_02022
symbol: ycgR
gene_biotype: protein_coding
description:
  Unannotated protein; Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)-dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility.


ensembl_gene_id: GCA_000308195_02049
symbol: panB
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family.


ensembl_gene_id: GCA_000308195_02052
symbol: C7440_2009
gene_biotype: protein_coding
description:
  Unannotated protein; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.


ensembl_gene_id: GCA_000308195_02061
symbol: C7440_2018
gene_biotype: protein_coding
description:
  Unannotated protein; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family.


ensembl_gene_id: GCA_000308195_02163
symbol: era
gene_biotype: protein_coding
description:
  Unannotated protein; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.


ensembl_gene_id: GCA_000308195_02164
symbol: rnc
gene_biotype: protein_coding
description:
  Unannotated protein; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.


ensembl_gene_id: GCA_000308195_02166
symbol: lepA
gene_biotype: protein_coding
description:
  Unannotated protein; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.


ensembl_gene_id: GCA_000308195_02171
symbol: C7440_1160
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.


ensembl_gene_id: GCA_000308195_02173
symbol: C7440_1158
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: GCA_000308195_02175
symbol: fabH
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.


ensembl_gene_id: GCA_000308195_02176
symbol: plsX
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.


ensembl_gene_id: GCA_000308195_02179
symbol: C7440_1152
gene_biotype: protein_coding
description:
  Unannotated protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes 7- methyl-GTP (m(7)GTP). May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids; Belongs to the Maf family. YceF subfamily.


ensembl_gene_id: GCA_000308195_02182
symbol: msrQ
gene_biotype: protein_coding
description:
  Unannotated protein; Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the  [...]


ensembl_gene_id: GCA_000308195_02183
symbol: msrP
gene_biotype: protein_coding
description:
  Unannotated protein; Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) [...]


ensembl_gene_id: GCA_000308195_02186
symbol: rne
gene_biotype: protein_coding
description:
  Unannotated protein; Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs. Belongs to the RNase E/G family. RNase E subfamily.


ensembl_gene_id: GCA_000308195_02187
symbol: accD
gene_biotype: protein_coding
description:
  Unannotated protein; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.


ensembl_gene_id: GCA_000308195_02188
symbol: trpA
gene_biotype: protein_coding
description:
  Unannotated protein; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.


ensembl_gene_id: GCA_000308195_02189
symbol: trpB
gene_biotype: protein_coding
description:
  Unannotated protein; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.


ensembl_gene_id: GCA_000308195_02193
symbol: pncB
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family.


ensembl_gene_id: GCA_000308195_02197
symbol: C7440_1134
gene_biotype: protein_coding
description:
  Unannotated protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.


ensembl_gene_id: GCA_000308195_02198
symbol: nth
gene_biotype: protein_coding
description:
  Unannotated protein; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.


ensembl_gene_id: GCA_000308195_02254
symbol: fusA
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.


ensembl_gene_id: GCA_000308195_02255
symbol: rpsG
gene_biotype: protein_coding
description:
  Unannotated protein; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.


ensembl_gene_id: GCA_000308195_02256
symbol: rpsL
gene_biotype: protein_coding
description:
  Unannotated protein; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.


ensembl_gene_id: GCA_000308195_02264
symbol: rplL
gene_biotype: protein_coding
description:
  Unannotated protein; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.


ensembl_gene_id: GCA_000308195_02265
symbol: rplJ
gene_biotype: protein_coding
description:
  Unannotated protein; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.


ensembl_gene_id: GCA_000308195_02266
symbol: rplA
gene_biotype: protein_coding
description:
  Unannotated protein; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.


ensembl_gene_id: GCA_000308195_02267
symbol: rplK
gene_biotype: protein_coding
description:
  Unannotated protein; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.


ensembl_gene_id: GCA_000308195_02269
symbol: secE
gene_biotype: protein_coding
description:
  Unannotated protein; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation; Belongs to the SecE/SEC61-gamma family.


ensembl_gene_id: GCA_000308195_02271
symbol: smc
gene_biotype: protein_coding
description:
  Unannotated protein; Required for chromosome condensation and partitioning. Belongs to the SMC family.


ensembl_gene_id: GCA_000308195_02272
symbol: C7440_1123
gene_biotype: protein_coding
description:
  Unannotated protein; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. Belongs to the ZipA family.


ensembl_gene_id: GCA_000308195_02273
symbol: ligA
gene_biotype: protein_coding
description:
  Unannotated protein; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA; Belongs to the NAD-dependent DNA ligase family. LigA subfamily.


ensembl_gene_id: GCA_000308195_02276
symbol: C7440_1127
gene_biotype: protein_coding
description:
  Unannotated protein; Involved in cell division; probably involved in intracellular septation; Belongs to the YciB family.


ensembl_gene_id: GCA_000308195_02281
symbol: trmD
gene_biotype: protein_coding
description:
  Unannotated protein; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.


ensembl_gene_id: GCA_000308195_02282
symbol: rimM
gene_biotype: protein_coding
description:
  Unannotated protein; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.


ensembl_gene_id: GCA_000308195_02285
symbol: alaS
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.


ensembl_gene_id: GCA_000308195_02315
symbol: pstB
gene_biotype: protein_coding
description:
  Unannotated protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.


ensembl_gene_id: GCA_000308195_02317
symbol: C7440_2343
gene_biotype: protein_coding
description:
  Unannotated protein; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: GCA_000308195_02318
symbol: C7440_2342
gene_biotype: protein_coding
description:
  Unannotated protein; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family.


ensembl_gene_id: GCA_000308195_02319
symbol: ppk
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.


ensembl_gene_id: GCA_000308195_02322
symbol: glmM
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.


ensembl_gene_id: GCA_000308195_02323
symbol: C7440_2337
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives.


ensembl_gene_id: GCA_000308195_02324
symbol: ftsH
gene_biotype: protein_coding
description:
  Unannotated protein; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family.  In the central section; belongs to the AAA ATPase family.


ensembl_gene_id: GCA_000308195_02325
symbol: rlmE
gene_biotype: protein_coding
description:
  Unannotated protein; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit.


ensembl_gene_id: GCA_000308195_02327
symbol: greA
gene_biotype: protein_coding
description:
  Unannotated protein; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.


ensembl_gene_id: GCA_000308195_02331
symbol: tal
gene_biotype: protein_coding
description:
  Unannotated protein; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.


ensembl_gene_id: GCA_000308195_02332
symbol: recR
gene_biotype: protein_coding
description:
  Unannotated protein; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.


ensembl_gene_id: GCA_000308195_02333
symbol: C7440_2327
gene_biotype: protein_coding
description:
  Unannotated protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.


ensembl_gene_id: GCA_000308195_02334
symbol: dnaX
gene_biotype: protein_coding
description:
  Unannotated protein; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: GCA_000308195_02337
symbol: xerD
gene_biotype: protein_coding
description:
  Unannotated protein; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.


ensembl_gene_id: GCA_000308195_02350
symbol: mutL
gene_biotype: protein_coding
description:
  Unannotated protein; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.


ensembl_gene_id: GCA_000308195_02351
symbol: miaA
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.


ensembl_gene_id: GCA_000308195_02355
symbol: pcnB
gene_biotype: protein_coding
description:
  Unannotated protein; Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control. Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.


ensembl_gene_id: GCA_000308195_02357
symbol: C7440_2301
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.


ensembl_gene_id: GCA_000308195_02364
symbol: C7440_2294
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.


ensembl_gene_id: GCA_000308195_02366
symbol: C7440_2292
gene_biotype: protein_coding
description:
  Unannotated protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: GCA_000308195_02370
symbol: rsmA
gene_biotype: protein_coding
description:
  Unannotated protein; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.


ensembl_gene_id: GCA_000308195_02371
symbol: surA
gene_biotype: protein_coding
description:
  Unannotated protein; Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation.


ensembl_gene_id: GCA_000308195_02372
symbol: lptD
gene_biotype: protein_coding
description:
  Unannotated protein; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane.


ensembl_gene_id: GCA_000308195_02383
symbol: mnmC
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the C-terminal section; belongs to the DAO family.


ensembl_gene_id: GCA_000308195_02388
symbol: secA
gene_biotype: protein_coding
description:
  Unannotated protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. Belongs to the SecA family.


ensembl_gene_id: GCA_000308195_02391
symbol: lpxC
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the LpxC family.


ensembl_gene_id: GCA_000308195_02392
symbol: ftsZ
gene_biotype: protein_coding
description:
  Unannotated protein; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.


ensembl_gene_id: GCA_000308195_02393
symbol: ftsA
gene_biotype: protein_coding
description:
  Unannotated protein; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.


ensembl_gene_id: GCA_000308195_02394
symbol: ftsQ
gene_biotype: protein_coding
description:
  Unannotated protein; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly.


ensembl_gene_id: GCA_000308195_02397
symbol: murG
gene_biotype: protein_coding
description:
  Unannotated protein; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.


ensembl_gene_id: GCA_000308195_02398
symbol: ftsW
gene_biotype: protein_coding
description:
  Unannotated protein; Peptidoglycan polymerase that is essential for cell division. Belongs to the SEDS family. FtsW subfamily.


ensembl_gene_id: GCA_000308195_02399
symbol: murD
gene_biotype: protein_coding
description:
  Unannotated protein; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.


ensembl_gene_id: GCA_000308195_02400
symbol: mraY
gene_biotype: protein_coding
description:
  Unannotated protein; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.


ensembl_gene_id: GCA_000308195_02401
symbol: murE
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily.


ensembl_gene_id: GCA_000308195_02403
symbol: ftsL
gene_biotype: protein_coding
description:
  Unannotated protein; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic.


ensembl_gene_id: GCA_000308195_02404
symbol: rsmH
gene_biotype: protein_coding
description:
  Unannotated protein; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.


ensembl_gene_id: GCA_000308195_02434
symbol: gloB
gene_biotype: protein_coding
description:
  Unannotated protein; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid.


ensembl_gene_id: GCA_000308195_02439
symbol: dnaQ
gene_biotype: protein_coding
description:
  Unannotated protein; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease.


ensembl_gene_id: GCA_000308195_02468
symbol: metK
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.


ensembl_gene_id: GCA_000308195_02471
symbol: dapF
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.


ensembl_gene_id: GCA_000308195_02479
symbol: dksA
gene_biotype: protein_coding
description:
  Unannotated protein; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters.


ensembl_gene_id: GCA_000308195_02482
symbol: hslV
gene_biotype: protein_coding
description:
  Unannotated protein; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery.


ensembl_gene_id: GCA_000308195_02483
symbol: hslU
gene_biotype: protein_coding
description:
  Unannotated protein; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis.


ensembl_gene_id: GCA_000308195_02503
symbol: zapD
gene_biotype: protein_coding
description:
  Unannotated protein; Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity.


ensembl_gene_id: GCA_000308195_02504
symbol: coaE
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.


ensembl_gene_id: GCA_000308195_02507
symbol: panC
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.


ensembl_gene_id: GCA_000308195_02508
symbol: C7440_1921
gene_biotype: protein_coding
description:
  Unannotated protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: GCA_000308195_02512
symbol: C7440_1925
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.


ensembl_gene_id: GCA_000308195_02515
symbol: thiG
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.


ensembl_gene_id: GCA_000308195_02519
symbol: C7440_1932
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose.


ensembl_gene_id: GCA_000308195_02521
symbol: C7440_1934
gene_biotype: protein_coding
description:
  Unannotated protein; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis. Belongs to the ABC1 family. UbiB subfamily.


ensembl_gene_id: GCA_000308195_02524
symbol: ubiE
gene_biotype: protein_coding
description:
  Unannotated protein; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2).


ensembl_gene_id: GCA_000308195_02529
symbol: ilvA
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA.


ensembl_gene_id: GCA_000308195_02530
symbol: apt
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.


ensembl_gene_id: GCA_000308195_02534
symbol: lptA
gene_biotype: protein_coding
description:
  Unannotated protein; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane.


ensembl_gene_id: GCA_000308195_02538
symbol: hprK
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the ATP- as well as the pyrophosphate-dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK/P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P-Ser-HPr).


ensembl_gene_id: GCA_000308195_02540
symbol: rlpA
gene_biotype: protein_coding
description:
  Unannotated protein; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.


ensembl_gene_id: GCA_000308195_02544
symbol: rsmI
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.


ensembl_gene_id: GCA_000308195_02546
symbol: gmhA
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate.


ensembl_gene_id: GCA_000308195_02549
symbol: argB
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.


ensembl_gene_id: GCA_000308195_02555
symbol: gpmA
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily.


ensembl_gene_id: GCA_000308195_02557
symbol: C7440_1970
gene_biotype: protein_coding
description:
  Unannotated protein; Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins.


ensembl_gene_id: GCA_000308195_02558
symbol: secB
gene_biotype: protein_coding
description:
  Unannotated protein; One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA.


ensembl_gene_id: GCA_000308195_02560
symbol: trmL
gene_biotype: protein_coding
description:
  Unannotated protein; Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S-adenosyl-L-methionine to the 2'-OH of the wobble nucleotide.


ensembl_gene_id: GCA_000308195_02579
symbol: rimO
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.


ensembl_gene_id: GCA_000308195_02581
symbol: fmt
gene_biotype: protein_coding
description:
  Unannotated protein; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.


ensembl_gene_id: GCA_000308195_02582
symbol: def
gene_biotype: protein_coding
description:
  Unannotated protein; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.


ensembl_gene_id: GCA_000308195_02586
symbol: C7440_1999
gene_biotype: protein_coding
description:
  Unannotated protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.


ensembl_gene_id: GCA_000308195_02588
symbol: C7440_2001
gene_biotype: protein_coding
description:
  Unannotated protein; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.


ensembl_gene_id: GCA_000308195_02594
symbol: ppc
gene_biotype: protein_coding
description:
  Unannotated protein; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle; Belongs to the PEPCase type 1 family.


ensembl_gene_id: GCA_000308195_02611
symbol: tpiA
gene_biotype: protein_coding
description:
  Unannotated protein; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.


ensembl_gene_id: GCA_000308195_02612
symbol: C7440_1005
gene_biotype: protein_coding
description:
  Unannotated protein; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.


ensembl_gene_id: GCA_000308195_02621
symbol: nuoA
gene_biotype: protein_coding
description:
  Unannotated protein; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family.


ensembl_gene_id: GCA_000308195_02622
symbol: nuoB
gene_biotype: protein_coding
description:
  Unannotated protein; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: GCA_000308195_02623
symbol: nuoC
gene_biotype: protein_coding
description:
  Unannotated protein; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family.


ensembl_gene_id: GCA_000308195_02624
symbol: nuoD
gene_biotype: protein_coding
description:
  Unannotated protein; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family.


ensembl_gene_id: GCA_000308195_02626
symbol: C7440_1101
gene_biotype: protein_coding
description:
  Unannotated protein; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family.


ensembl_gene_id: GCA_000308195_02627
symbol: C7440_1102
gene_biotype: protein_coding
description:
  Unannotated protein; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family.


ensembl_gene_id: GCA_000308195_02628
symbol: nuoH
gene_biotype: protein_coding
description:
  Unannotated protein; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone.


ensembl_gene_id: GCA_000308195_02630
symbol: C7440_1105
gene_biotype: protein_coding
description:
  Unannotated protein; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: GCA_000308195_02631
symbol: nuoK
gene_biotype: protein_coding
description:
  Unannotated protein; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family.


ensembl_gene_id: GCA_000308195_02634
symbol: nuoN
gene_biotype: protein_coding
description:
  Unannotated protein; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family.


ensembl_gene_id: GCA_000308195_02644
symbol: ispF
gene_biotype: protein_coding
description:
  Unannotated protein; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP).


ensembl_gene_id: GCA_000308195_02645
symbol: ispD
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP).


ensembl_gene_id: GCA_000308195_02646
symbol: mfd
gene_biotype: protein_coding
description:
  Unannotated protein; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.


ensembl_gene_id: GCA_000308195_02661
symbol: metXS
gene_biotype: protein_coding
description:
  Unannotated protein; Transfers a succinyl group from succinyl-CoA to L-homoserine, forming succinyl-L-homoserine.


ensembl_gene_id: GCA_000308195_02665
symbol: aqpZ
gene_biotype: protein_coding
description:
  Unannotated protein; Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity; Belongs to the MIP/aquaporin (TC 1.A.8) family.


ensembl_gene_id: GCA_000308195_02671
symbol: gatB
gene_biotype: protein_coding
description:
  Unannotated protein; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily.


ensembl_gene_id: GCA_000308195_02672
symbol: gatA
gene_biotype: protein_coding
description:
  Unannotated protein; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).


ensembl_gene_id: GCA_000308195_02675
symbol: flhD
gene_biotype: protein_coding
description:
  Unannotated protein; Functions in complex with FlhC as a master transcriptional regulator that regulates transcription of several flagellar and non- flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways; Belongs to the FlhD family.


ensembl_gene_id: GCA_000308195_02676
symbol: flhC
gene_biotype: protein_coding
description:
  Unannotated protein; Functions in complex with FlhD as a master transcriptional regulator that regulates transcription of several flagellar and non- flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways; Belongs to the FlhC family.


ensembl_gene_id: GCA_000308195_02682
symbol: C7440_1276
gene_biotype: protein_coding
description:
  Unannotated protein; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP.


ensembl_gene_id: GCA_000308195_02683
symbol: cheB
gene_biotype: protein_coding
description:
  Unannotated protein; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.


ensembl_gene_id: GCA_000308195_02685
symbol: C7440_1279
gene_biotype: protein_coding
description:
  Unannotated protein; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P).


ensembl_gene_id: GCA_000308195_02687
symbol: flhB
gene_biotype: protein_coding
description:
  Unannotated protein; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family.


ensembl_gene_id: GCA_000308195_02688
symbol: flhA
gene_biotype: protein_coding
description:
  Unannotated protein; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.


ensembl_gene_id: GCA_000308195_02692
symbol: C7440_1286
gene_biotype: protein_coding
description:
  Unannotated protein; Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P- ring assembly; Belongs to the FlgA family.


ensembl_gene_id: GCA_000308195_02693
symbol: C7440_1287
gene_biotype: protein_coding
description:
  Unannotated protein; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.


ensembl_gene_id: GCA_000308195_02699
symbol: flgH
gene_biotype: protein_coding
description:
  Unannotated protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.


ensembl_gene_id: GCA_000308195_02708
symbol: fliP
gene_biotype: protein_coding
description:
  Unannotated protein; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.


ensembl_gene_id: GCA_000308195_02712
symbol: C7440_1306
gene_biotype: protein_coding
description:
  Unannotated protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.


ensembl_gene_id: GCA_000308195_02718
symbol: C7440_1312
gene_biotype: protein_coding
description:
  Unannotated protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family.


ensembl_gene_id: GCA_000308195_02740
symbol: C7440_3374
gene_biotype: protein_coding
description:
  Unannotated protein; Transcriptional regulator; Belongs to the transcriptional regulatory CopG/NikR family.


ensembl_gene_id: GCA_000308195_02752
symbol: selO
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the transfer of adenosine 5'-monophosphate (AMP) to Ser, Thr or Tyr residues of target proteins (AMPylation). Belongs to the SELO family.


ensembl_gene_id: GCA_000308195_02756
symbol: dusA
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs; Belongs to the Dus family. DusA subfamily.


ensembl_gene_id: GCA_000308195_02765
symbol: lolD
gene_biotype: protein_coding
description:
  Unannotated protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner.


ensembl_gene_id: GCA_000308195_02770
symbol: lon
gene_biotype: protein_coding
description:
  Unannotated protein; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.


ensembl_gene_id: GCA_000308195_02777
symbol: prmB
gene_biotype: protein_coding
description:
  Unannotated protein; Specifically methylates the 50S ribosomal protein L3 on a specific glutamine residue; Belongs to the protein N5-glutamine methyltransferase family. PrmB subfamily.


ensembl_gene_id: GCA_000308195_02778
symbol: dapE
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily.


ensembl_gene_id: GCA_000308195_02782
symbol: tig
gene_biotype: protein_coding
description:
  Unannotated protein; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.


ensembl_gene_id: GCA_000308195_02783
symbol: clpP
gene_biotype: protein_coding
description:
  Unannotated protein; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: GCA_000308195_02784
symbol: clpX
gene_biotype: protein_coding
description:
  Unannotated protein; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.


ensembl_gene_id: GCA_000308195_02798
symbol: lexA
gene_biotype: protein_coding
description:
  Unannotated protein; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair.


ensembl_gene_id: GCA_000308195_02800
symbol: uvrB
gene_biotype: protein_coding
description:
  Unannotated protein; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the [...]


ensembl_gene_id: GCA_000308195_02803
symbol: iscS
gene_biotype: protein_coding
description:
  Unannotated protein; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins.


ensembl_gene_id: GCA_000308195_02804
symbol: C7440_3801
gene_biotype: protein_coding
description:
  Unannotated protein; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters.


ensembl_gene_id: GCA_000308195_02806
symbol: hscB
gene_biotype: protein_coding
description:
  Unannotated protein; Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA; Belongs to the HscB family.


ensembl_gene_id: GCA_000308195_02807
symbol: hscA
gene_biotype: protein_coding
description:
  Unannotated protein; Chaperone involved in the maturation of iron-sulfur cluster- containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB.


ensembl_gene_id: GCA_000308195_02819
symbol: phnC
gene_biotype: protein_coding
description:
  Unannotated protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.


ensembl_gene_id: GCA_000308195_02825
symbol: C7440_2650
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism.


ensembl_gene_id: GCA_000308195_02834
symbol: efp
gene_biotype: protein_coding
description:
  Unannotated protein; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.


ensembl_gene_id: GCA_000308195_02842
symbol: ubiD
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol, an intermediate step in ubiquinone biosynthesis.


ensembl_gene_id: GCA_000308195_02847
symbol: upp
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.


ensembl_gene_id: GCA_000308195_02850
symbol: purU
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4).


ensembl_gene_id: GCA_000308195_02877
symbol: C7440_0824
gene_biotype: protein_coding
description:
  Unannotated protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.


ensembl_gene_id: GCA_000308195_02878
symbol: purK
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR).


ensembl_gene_id: GCA_000308195_02879
symbol: purE
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).


ensembl_gene_id: GCA_000308195_02881
symbol: C7440_0820
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis.


ensembl_gene_id: GCA_000308195_02886
symbol: C7440_0815
gene_biotype: protein_coding
description:
  Unannotated protein; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.


ensembl_gene_id: GCA_000308195_02891
symbol: valS
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.


ensembl_gene_id: GCA_000308195_02892
symbol: ndk
gene_biotype: protein_coding
description:
  Unannotated protein; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.


ensembl_gene_id: GCA_000308195_02893
symbol: rlmN
gene_biotype: protein_coding
description:
  Unannotated protein; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family.


ensembl_gene_id: GCA_000308195_02895
symbol: ispG
gene_biotype: protein_coding
description:
  Unannotated protein; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family.


ensembl_gene_id: GCA_000308195_02904
symbol: glmU
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain.


ensembl_gene_id: GCA_000308195_02909
symbol: glmS
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.


ensembl_gene_id: GCA_000308195_02942
symbol: cpoB
gene_biotype: protein_coding
description:
  Unannotated protein; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family.


ensembl_gene_id: GCA_000308195_02943
symbol: pal
gene_biotype: protein_coding
description:
  Unannotated protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.


ensembl_gene_id: GCA_000308195_02949
symbol: proS
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacyl [...]


ensembl_gene_id: GCA_000308195_02950
symbol: rppH
gene_biotype: protein_coding
description:
  Unannotated protein; Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage; Belongs to the Nudix hydrolase family. RppH subfamily.


ensembl_gene_id: GCA_000308195_02956
symbol: lgt
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.


ensembl_gene_id: GCA_000308195_02959
symbol: msrA
gene_biotype: protein_coding
description:
  Unannotated protein; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.


ensembl_gene_id: GCA_000308195_02961
symbol: gatC
gene_biotype: protein_coding
description:
  Unannotated protein; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.


ensembl_gene_id: GCA_000308195_02965
symbol: mrdA
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily.


ensembl_gene_id: GCA_000308195_02966
symbol: mrdB
gene_biotype: protein_coding
description:
  Unannotated protein; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.


ensembl_gene_id: GCA_000308195_02967
symbol: parC
gene_biotype: protein_coding
description:
  Unannotated protein; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase GyrA/ParC subunit family. ParC type 1 subfamily.


ensembl_gene_id: GCA_000308195_02968
symbol: parE
gene_biotype: protein_coding
description:
  Unannotated protein; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 1 subfamily.


ensembl_gene_id: GCA_000308195_02970
symbol: rho
gene_biotype: protein_coding
description:
  Unannotated protein; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.


ensembl_gene_id: GCA_000308195_02973
symbol: glnE
gene_biotype: protein_coding
description:
  Unannotated protein; Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) [...]


ensembl_gene_id: GCA_000308195_02975
symbol: queH
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr).


ensembl_gene_id: GCA_000308195_02981
symbol: clpB
gene_biotype: protein_coding
description:
  Unannotated protein; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.


ensembl_gene_id: GCA_000308195_02993
symbol: glpK
gene_biotype: protein_coding
description:
  Unannotated protein; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.


ensembl_gene_id: GCA_000308195_02998
symbol: panD
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.


ensembl_gene_id: GCA_000308195_03007
symbol: C7440_3068
gene_biotype: protein_coding
description:
  Unannotated protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.


ensembl_gene_id: GCA_000308195_03009
symbol: rlmH
gene_biotype: protein_coding
description:
  Unannotated protein; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.


ensembl_gene_id: GCA_000308195_03010
symbol: rsfS
gene_biotype: protein_coding
description:
  Unannotated protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.


ensembl_gene_id: GCA_000308195_03011
symbol: nadD
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).


ensembl_gene_id: GCA_000308195_03012
symbol: hemF
gene_biotype: protein_coding
description:
  Unannotated protein; Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen- IX.


ensembl_gene_id: GCA_000308195_03024
symbol: ectA
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the acetylation of L-2,4-diaminobutyrate (DABA) to gamma-N-acetyl-alpha,gamma-diaminobutyric acid (ADABA) with acetyl coenzyme A.


ensembl_gene_id: GCA_000308195_03025
symbol: C7440_3050
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes reversively the conversion of L-aspartate beta- semialdehyde (ASA) to L-2,4-diaminobutyrate (DABA) by transamination with L-glutamate; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: GCA_000308195_03026
symbol: ectC
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the circularization of gamma-N-acetyl-alpha,gamma- diaminobutyric acid (ADABA) to ectoine (1,4,5,6-tetrahydro-2-methyl-4- pyrimidine carboxylic acid), which is an excellent osmoprotectant.


ensembl_gene_id: GCA_000308195_03032
symbol: C7440_3043
gene_biotype: protein_coding
description:
  Unannotated protein; Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino- heptulosonate-7-phosphate (DAHP).


ensembl_gene_id: GCA_000308195_03034
symbol: mnmA
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.


ensembl_gene_id: GCA_000308195_03047
symbol: dinB
gene_biotype: protein_coding
description:
  Unannotated protein; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.


ensembl_gene_id: GCA_000308195_03054
symbol: ung
gene_biotype: protein_coding
description:
  Unannotated protein; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.


ensembl_gene_id: GCA_000308195_03076
symbol: selU
gene_biotype: protein_coding
description:
  Unannotated protein; Involved in the post-transcriptional modification of the uridine at the wobble position (U34) of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Catalyzes the conversion of 2-thiouridine (S2U-RNA) to 2- selenouridine (Se2U-RNA). Acts in a two-step process involving geranylation of 2-thiouridine (S2U) to S-geranyl-2-thiouridine (geS2U) and subsequent selenation of the latter derivative to 2-selenouridine (Se2U) in the tRNA chain.


ensembl_gene_id: GCA_000308195_03093
symbol: prfB
gene_biotype: protein_coding
description:
  Unannotated protein; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.


ensembl_gene_id: GCA_000308195_03095
symbol: C7440_3787
gene_biotype: protein_coding
description:
  Unannotated protein; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.


ensembl_gene_id: GCA_000308195_03106
symbol: C7440_3776
gene_biotype: protein_coding
description:
  Unannotated protein; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family.


ensembl_gene_id: GCA_000308195_03122
symbol: lipA
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.


ensembl_gene_id: GCA_000308195_03126
symbol: C7440_3358
gene_biotype: protein_coding
description:
  Unannotated protein; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family.


ensembl_gene_id: GCA_000308195_03135
symbol: lipB
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate.


ensembl_gene_id: GCA_000308195_03139
symbol: aroC
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.


ensembl_gene_id: GCA_000308195_03143
symbol: leuB
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.


ensembl_gene_id: GCA_000308195_03144
symbol: asd
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.


ensembl_gene_id: GCA_000308195_03146
symbol: truA
gene_biotype: protein_coding
description:
  Unannotated protein; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.


ensembl_gene_id: GCA_000308195_03152
symbol: pdxH
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP).


ensembl_gene_id: GCA_000308195_03153
symbol: C7440_0857
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the cleavage of glutathione into 5-oxo-L-proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides; Belongs to the gamma-glutamylcyclotransferase family.


ensembl_gene_id: GCA_000308195_03155
symbol: tuf
gene_biotype: protein_coding
description:
  Unannotated protein; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.


ensembl_gene_id: GCA_000308195_03157
symbol: trpE
gene_biotype: protein_coding
description:
  Unannotated protein; Part of a heterotetrameric complex that catalyzes the two- step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine-binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia.


ensembl_gene_id: GCA_000308195_03158
symbol: C7440_0326
gene_biotype: protein_coding
description:
  Unannotated protein; Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family.


ensembl_gene_id: GCA_000308195_03163
symbol: C7440_0331
gene_biotype: protein_coding
description:
  Unannotated protein; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily.


ensembl_gene_id: GCA_000308195_03189
symbol: C7440_0742
gene_biotype: protein_coding
description:
  Unannotated protein; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily.


ensembl_gene_id: GCA_000308195_03191
symbol: moaC
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family.


ensembl_gene_id: GCA_000308195_03194
symbol: C7440_0737
gene_biotype: protein_coding
description:
  Unannotated protein; May be involved in the biosynthesis of molybdopterin. Belongs to the MoaB/Mog family.


ensembl_gene_id: GCA_000308195_03195
symbol: C7440_0736
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.


ensembl_gene_id: GCA_000308195_03196
symbol: mobA
gene_biotype: protein_coding
description:
  Unannotated protein; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor; Belongs to the MobA family.


ensembl_gene_id: GCA_000308195_03198
symbol: moaA
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.


ensembl_gene_id: GCA_000308195_03203
symbol: fdhD
gene_biotype: protein_coding
description:
  Unannotated protein; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.


ensembl_gene_id: GCA_000308195_03248
symbol: C7440_0690
gene_biotype: protein_coding
description:
  Unannotated protein; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.


ensembl_gene_id: GCA_000308195_03312
symbol: rhlE
gene_biotype: protein_coding
description:
  Unannotated protein; DEAD-box RNA helicase involved in ribosome assembly. Has RNA- dependent ATPase activity and unwinds double-stranded RNA.


ensembl_gene_id: GCA_000308195_03313
symbol: prfC
gene_biotype: protein_coding
description:
  Unannotated protein; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.


ensembl_gene_id: GCA_000308195_03319
symbol: leuA
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 2 subfamily.


ensembl_gene_id: GCA_000308195_03330
symbol: C7440_0510
gene_biotype: protein_coding
description:
  Unannotated protein; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.


ensembl_gene_id: GCA_000308195_03343
symbol: proB
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.


ensembl_gene_id: GCA_000308195_03344
symbol: obg
gene_biotype: protein_coding
description:
  Unannotated protein; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.


ensembl_gene_id: GCA_000308195_03346
symbol: rplU
gene_biotype: protein_coding
description:
  Unannotated protein; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.


ensembl_gene_id: GCA_000308195_03347
symbol: argJ
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family.


ensembl_gene_id: GCA_000308195_03356
symbol: thiE
gene_biotype: protein_coding
description:
  Unannotated protein; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.


ensembl_gene_id: GCA_000308195_03360
symbol: C7440_0540
gene_biotype: protein_coding
description:
  Unannotated protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.


ensembl_gene_id: GCA_000308195_03364
symbol: mtgA
gene_biotype: protein_coding
description:
  Unannotated protein; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family.


ensembl_gene_id: GCA_000308195_03365
symbol: aroE
gene_biotype: protein_coding
description:
  Unannotated protein; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).


ensembl_gene_id: GCA_000308195_03369
symbol: mpl
gene_biotype: protein_coding
description:
  Unannotated protein; Reutilizes the intact tripeptide L-alanyl-gamma-D-glutamyl- meso-diaminopimelate by linking it to UDP-N-acetylmuramate. Belongs to the MurCDEF family. Mpl subfamily.


ensembl_gene_id: GCA_000308195_03371
symbol: aroQ
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.


ensembl_gene_id: GCA_000308195_03372
symbol: C7440_0552
gene_biotype: protein_coding
description:
  Unannotated protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: GCA_000308195_03374
symbol: prmA
gene_biotype: protein_coding
description:
  Unannotated protein; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family.


ensembl_gene_id: GCA_000308195_03380
symbol: C7440_0560
gene_biotype: protein_coding
description:
  Unannotated protein; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family.


ensembl_gene_id: GCA_000308195_03381
symbol: C7440_0561
gene_biotype: protein_coding
description:
  Unannotated protein; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.


ensembl_gene_id: GCA_000308195_03384
symbol: gltX
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.


ensembl_gene_id: GCA_000308195_03389
symbol: rplM
gene_biotype: protein_coding
description:
  Unannotated protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.


ensembl_gene_id: GCA_000308195_03391
symbol: argC
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.


ensembl_gene_id: GCA_000308195_03394
symbol: anmK
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the anhydro-N-acetylmuramic acid kinase family.


ensembl_gene_id: GCA_000308195_03396
symbol: tyrS
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 2 subfamily.


ensembl_gene_id: GCA_000308195_03398
symbol: glyA
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.


ensembl_gene_id: GCA_000308195_03399
symbol: nrdR
gene_biotype: protein_coding
description:
  Unannotated protein; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family.


ensembl_gene_id: GCA_000308195_03400
symbol: C7440_0580
gene_biotype: protein_coding
description:
  Unannotated protein; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.


ensembl_gene_id: GCA_000308195_03433
symbol: nhaA
gene_biotype: protein_coding
description:
  Unannotated protein; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family.


ensembl_gene_id: GCA_000308195_03434
symbol: thiC
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction.


ensembl_gene_id: GCA_000308195_03438
symbol: cpdA
gene_biotype: protein_coding
description:
  Unannotated protein; Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes.


ensembl_gene_id: GCA_000308195_03445
symbol: aat
gene_biotype: protein_coding
description:
  Unannotated protein; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine.


ensembl_gene_id: GCA_000308195_03446
symbol: bpt
gene_biotype: protein_coding
description:
  Unannotated protein; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily.


ensembl_gene_id: GCA_000308195_03447
symbol: pyrD-2
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.


ensembl_gene_id: GCA_000308195_03460
symbol: ilvE
gene_biotype: protein_coding
description:
  Unannotated protein; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: GCA_000308195_03468
symbol: dusB
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the Dus family. DusB subfamily.


ensembl_gene_id: GCA_000308195_03471
symbol: ruvC
gene_biotype: protein_coding
description:
  Unannotated protein; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.


ensembl_gene_id: GCA_000308195_03472
symbol: ruvA
gene_biotype: protein_coding
description:
  Unannotated protein; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.


ensembl_gene_id: GCA_000308195_03473
symbol: ruvB
gene_biotype: protein_coding
description:
  Unannotated protein; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.


ensembl_gene_id: GCA_000308195_03482
symbol: minC
gene_biotype: protein_coding
description:
  Unannotated protein; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family.


ensembl_gene_id: GCA_000308195_03484
symbol: minE
gene_biotype: protein_coding
description:
  Unannotated protein; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell.


ensembl_gene_id: GCA_000308195_03495
symbol: C7440_1318
gene_biotype: protein_coding
description:
  Unannotated protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.


ensembl_gene_id: GCA_000308195_03498
symbol: ribA
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family.


ensembl_gene_id: GCA_000308195_03501
symbol: azoR
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family.


ensembl_gene_id: GCA_000308195_03515
symbol: pepA
gene_biotype: protein_coding
description:
  Unannotated protein; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.


ensembl_gene_id: GCA_000308195_03522
symbol: acsA
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family.


ensembl_gene_id: GCA_000308195_03529
symbol: pyrG
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.


ensembl_gene_id: GCA_000308195_03531
symbol: eno
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.


ensembl_gene_id: GCA_000308195_03534
symbol: C7440_1193
gene_biotype: protein_coding
description:
  Unannotated protein; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress; Belongs to the HSP33 family.


ensembl_gene_id: GCA_000308195_03541
symbol: proA
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.


ensembl_gene_id: GCA_000308195_03543
symbol: lptE
gene_biotype: protein_coding
description:
  Unannotated protein; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane; Belongs to the LptE lipoprotein family.


ensembl_gene_id: GCA_000308195_03554
symbol: ispH
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.


ensembl_gene_id: GCA_000308195_03558
symbol: dapB
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.


ensembl_gene_id: GCA_000308195_03562
symbol: nadK
gene_biotype: protein_coding
description:
  Unannotated protein; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.


ensembl_gene_id: GCA_000308195_03563
symbol: hrcA
gene_biotype: protein_coding
description:
  Unannotated protein; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons.


ensembl_gene_id: GCA_000308195_03564
symbol: hemH
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.


ensembl_gene_id: GCA_000308195_03565
symbol: grpE
gene_biotype: protein_coding
description:
  Unannotated protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-depe [...]


ensembl_gene_id: GCA_000308195_03567
symbol: dnaJ
gene_biotype: protein_coding
description:
  Unannotated protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK [...]


ensembl_gene_id: GCA_000308195_03568
symbol: C7440_0945
gene_biotype: protein_coding
description:
  Unannotated protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: GCA_000308195_03591
symbol: lolA
gene_biotype: protein_coding
description:
  Unannotated protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).


ensembl_gene_id: GCA_000308195_03593
symbol: serS
gene_biotype: protein_coding
description:
  Unannotated protein; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).


# pathwayInfo

id: CL:1008
description: Small molecule biosynthetic process, and Nucleotide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1008_Small_molecule_biosynthetic_process,_and_Nucleotide_biosynthetic_process


id: CL:1009
description: Cellular amino acid biosynthetic process, and Ribonucleoside monophosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1009_Cellular_amino_acid_biosynthetic_process,_and_Ribonucleoside_monophosphate_biosynthetic_process


id: CL:1010
description: Amino-acid biosynthesis, and Ribonucleoside monophosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1010_Amino-acid_biosynthesis,_and_Ribonucleoside_monophosphate_biosynthetic_process


id: CL:1011
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1011_Mixed,_incl._Ribonucleoside_monophosphate_biosynthetic_process,_and_Glutamine_family_amino_acid_biosynthetic_process

description:
  Mixed, incl. Ribonucleoside monophosphate biosynthetic process, and Glutamine family amino acid biosynthetic process


id: CL:1012
description: Ribonucleoside monophosphate biosynthetic process, and Glycine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1012_Ribonucleoside_monophosphate_biosynthetic_process,_and_Glycine_metabolic_process


id: CL:1014
description: Purine biosynthesis, and Glycine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1014_Purine_biosynthesis,_and_Glycine_metabolic_process


id: CL:1015
description: IMP metabolic process, and Glycine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1015_IMP_metabolic_process,_and_Glycine_metabolic_process


id: CL:1035
description: Glycine metabolic process, and One-carbon metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1035_Glycine_metabolic_process,_and_One-carbon_metabolism


id: CL:1046
description: Mixed, incl. AMP metabolic process, and GMP biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1046_Mixed,_incl._AMP_metabolic_process,_and_GMP_biosynthesis


id: CL:1048
description: Mixed, incl. GMP biosynthesis, and De novo AMP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1048_Mixed,_incl._GMP_biosynthesis,_and_De_novo_AMP_biosynthetic_process


id: CL:1070
description: De novo UMP biosynthetic process, and Permease family
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1070_De_novo_UMP_biosynthetic_process,_and_Permease_family


id: CL:1074
description: De novo UMP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1074_De_novo_UMP_biosynthetic_process


id: CL:1089
description: Mixed, incl. Histidine biosynthesis protein, and Orotate phosphoribosyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1089_Mixed,_incl._Histidine_biosynthesis_protein,_and_Orotate_phosphoribosyltransferase


id: CL:1099
description: Glutamine family amino acid biosynthetic process, and Lysine biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1099_Glutamine_family_amino_acid_biosynthetic_process,_and_Lysine_biosynthetic_process


id: CL:110
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:110_Structural_constituent_of_ribosome


id: CL:1100
description: Lysine biosynthetic process, and Arginine biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1100_Lysine_biosynthetic_process,_and_Arginine_biosynthetic_process


id: CL:1101
description: Arginine biosynthetic process, and Lysine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1101_Arginine_biosynthetic_process,_and_Lysine_biosynthesis


id: CL:1130
description: Lysine biosynthetic process, and Methyltransferase HemK-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1130_Lysine_biosynthetic_process,_and_Methyltransferase_HemK-like


id: CL:1139
description: Nitrogen metabolism, and Proline metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1139_Nitrogen_metabolism,_and_Proline_metabolic_process


id: CL:1141
description: Glutamine family amino acid biosynthetic process, and Nitrogen metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1141_Glutamine_family_amino_acid_biosynthetic_process,_and_Nitrogen_metabolism


id: CL:1143
description: Carbapenem biosynthesis, and Glutamate synthase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1143_Carbapenem_biosynthesis,_and_Glutamate_synthase_domain


id: CL:1179
description: Aromatic amino acid family biosynthetic process, and Histidine biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1179_Aromatic_amino_acid_family_biosynthetic_process,_and_Histidine_biosynthetic_process


id: CL:1182
description: Aromatic amino acid family biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1182_Aromatic_amino_acid_family_biosynthetic_process


id: CL:1183
description: Chorismate metabolic process, and NADP oxidoreductase coenzyme F420-dependent
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1183_Chorismate_metabolic_process,_and_NADP_oxidoreductase_coenzyme_F420-dependent


id: CL:123
description: rRNA-binding, and Peptide binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:123_rRNA-binding,_and_Peptide_binding


id: CL:124
description: Mixed, incl. Small ribosomal subunit, and mRNA binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:124_Mixed,_incl._Small_ribosomal_subunit,_and_mRNA_binding


id: CL:1241
description: Cysteine and methionine metabolism, and Threonine biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1241_Cysteine_and_methionine_metabolism,_and_Threonine_biosynthetic_process


id: CL:1242
description: Mixed, incl. Sulfur amino acid metabolic process, and One-carbon metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1242_Mixed,_incl._Sulfur_amino_acid_metabolic_process,_and_One-carbon_metabolism


id: CL:1243
description: Sulfur amino acid metabolic process, and One-carbon metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1243_Sulfur_amino_acid_metabolic_process,_and_One-carbon_metabolism


id: CL:1246
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1246_Cys/Met_metabolism,_pyridoxal_phosphate-dependent_enzyme,_and_Cobalamin-independent_methionine_synthase_MetE,_C-terminal/archaeal

description:
  Cys/Met metabolism, pyridoxal phosphate-dependent enzyme, and Cobalamin-independent methionine synthase MetE, C-terminal/archaeal


id: CL:1248
description: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1248_Cys/Met_metabolism,_pyridoxal_phosphate-dependent_enzyme


id: CL:1279
description: Threonine biosynthetic process, and Succinyldiaminopimelate transaminase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1279_Threonine_biosynthetic_process,_and_Succinyldiaminopimelate_transaminase_activity


id: CL:1295
description: Vitamin B6 metabolic process, and Ammonia-lyase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1295_Vitamin_B6_metabolic_process,_and_Ammonia-lyase_activity


id: CL:1304
description: Vitamin metabolic process, and Pyridine nucleotide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1304_Vitamin_metabolic_process,_and_Pyridine_nucleotide_biosynthetic_process


id: CL:1305
description: Vitamin metabolic process, and Pyridine nucleotide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1305_Vitamin_metabolic_process,_and_Pyridine_nucleotide_biosynthetic_process


id: CL:1306
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1306_Vitamin_metabolic_process,_and_GTP_cyclohydrolase_I,_C-terminal/NADPH-dependent_7-cyano-7-deazaguanine_reductase

description:
  Vitamin metabolic process, and GTP cyclohydrolase I, C-terminal/NADPH-dependent 7-cyano-7-deazaguanine reductase


id: CL:1307
description: Riboflavin metabolic process, and Tetrahydrofolate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1307_Riboflavin_metabolic_process,_and_Tetrahydrofolate_biosynthetic_process


id: CL:1309
description: Riboflavin metabolic process, and Tetrahydrofolate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1309_Riboflavin_metabolic_process,_and_Tetrahydrofolate_biosynthetic_process


id: CL:1321
description: Tetrahydrofolate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1321_Tetrahydrofolate_biosynthetic_process


id: CL:1338
description: Pantothenate metabolic process, and Coenzyme A metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1338_Pantothenate_metabolic_process,_and_Coenzyme_A_metabolic_process


id: CL:1339
description: Pantothenate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1339_Pantothenate_biosynthetic_process


id: CL:1350
description: Coenzyme A metabolic process, and Biotin/lipoate A/B protein ligase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1350_Coenzyme_A_metabolic_process,_and_Biotin/lipoate_A/B_protein_ligase_family


id: CL:1359
description: Pyridine nucleotide biosynthetic process, and NAD(P)+ transhydrogenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1359_Pyridine_nucleotide_biosynthetic_process,_and_NAD(P)+_transhydrogenase_activity


id: CL:1361
description: NAD(P)+ transhydrogenase activity, and Nicotinamide nucleotide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1361_NAD(P)+_transhydrogenase_activity,_and_Nicotinamide_nucleotide_biosynthetic_process


id: CL:137
description: Peptide binding, and rRNA-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:137_Peptide_binding,_and_rRNA-binding


id: CL:1380
description: Thiamine diphosphate metabolic process, and ThiF family
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1380_Thiamine_diphosphate_metabolic_process,_and_ThiF_family


id: CL:1383
description: Thiamine diphosphate metabolic process, and ThiF family
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1383_Thiamine_diphosphate_metabolic_process,_and_ThiF_family


id: CL:1405
description: Glutathione metabolism, and Disulfide oxidoreductase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1405_Glutathione_metabolism,_and_Disulfide_oxidoreductase_activity


id: CL:1410
description: Glutathione biosynthetic process, and Aminopeptidase
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1410_Glutathione_biosynthetic_process,_and_Aminopeptidase


id: CL:1423
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1423_Mixed,_incl._Glutathione_S-transferase,_N-terminal_domain,_and_Glutathione_disulfide_oxidoreductase_activity

description:
  Mixed, incl. Glutathione S-transferase, N-terminal domain, and Glutathione disulfide oxidoreductase activity


id: CL:1442
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1442_Disulfide_oxidoreductase_activity,_and_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_disulfide_as_acceptor

description:
  Disulfide oxidoreductase activity, and Oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor


id: CL:1462
description: Mixed, incl. Queuosine metabolic process, and Ferritin-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1462_Mixed,_incl._Queuosine_metabolic_process,_and_Ferritin-like_domain


id: CL:1476
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1476_Mixed,_incl._Ferritin-like_domain,_and_ATP-dependent_DNA_helicase_RecG/Transcription-repair-coupling_factor

description:
  Mixed, incl. Ferritin-like domain, and ATP-dependent DNA helicase RecG/Transcription-repair-coupling factor


id: CL:1488
description: Phosphotransferase system (PTS)
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1488_Phosphotransferase_system_(PTS)


id: CL:149
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:149_Structural_constituent_of_ribosome


id: CL:1502
description: Base excision repair, and Adenosine to inosine editing
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1502_Base_excision_repair,_and_Adenosine_to_inosine_editing


id: CL:1504
description: Base excision repair, and Adenosine to inosine editing
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1504_Base_excision_repair,_and_Adenosine_to_inosine_editing


id: CL:1506
description: AP endonuclease 1, and Base-excision repair
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1506_AP_endonuclease_1,_and_Base-excision_repair


id: CL:151
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:151_Mixed,_incl._Ribosomal_protein_L7/L12,_C-terminal/adaptor_protein_ClpS-like,_and_Elongation_factor_G_C-terminus

description:
  Mixed, incl. Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like, and Elongation factor G C-terminus


id: CL:1533
description: Mixed, incl. Oxaloacetate decarboxylase activity, and Carbon fixation pathways in prokaryotes
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1533_Mixed,_incl._Oxaloacetate_decarboxylase_activity,_and_Carbon_fixation_pathways_in_prokaryotes


id: CL:1544
description: Mixed, incl. Lysin motif, and Pyrimidine nucleotide catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1544_Mixed,_incl._Lysin_motif,_and_Pyrimidine_nucleotide_catabolic_process


id: CL:1556
description: Mixed, incl. Outer membrane, and Lipopolysaccharide biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1556_Mixed,_incl._Outer_membrane,_and_Lipopolysaccharide_biosynthesis


id: CL:1557
description: Mixed, incl. Outer membrane, and Lipopolysaccharide biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1557_Mixed,_incl._Outer_membrane,_and_Lipopolysaccharide_biosynthesis


id: CL:1558
description: Mixed, incl. Cell envelope, and Lipopolysaccharide biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1558_Mixed,_incl._Cell_envelope,_and_Lipopolysaccharide_biosynthesis


id: CL:1559
description: Mixed, incl. Cell envelope, and Lipopolysaccharide biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1559_Mixed,_incl._Cell_envelope,_and_Lipopolysaccharide_biosynthesis


id: CL:1560
description: Mixed, incl. Cell envelope, and Lipopolysaccharide biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1560_Mixed,_incl._Cell_envelope,_and_Lipopolysaccharide_biosynthesis


id: CL:1562
description: Mixed, incl. Cellular polysaccharide metabolic process, and Gram-negative porin
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1562_Mixed,_incl._Cellular_polysaccharide_metabolic_process,_and_Gram-negative_porin


id: CL:1564
description: Mixed, incl. Gram-negative porin, and Lipopolysaccharide metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1564_Mixed,_incl._Gram-negative_porin,_and_Lipopolysaccharide_metabolic_process


id: CL:1565
description: Mixed, incl. Gram-negative porin, and MatE
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1565_Mixed,_incl._Gram-negative_porin,_and_MatE


id: CL:1567
description: Mixed, incl. Gram-negative porin, and Thioredoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1567_Mixed,_incl._Gram-negative_porin,_and_Thioredoxin


id: CL:1568
description: Mixed, incl. Gram-negative porin, and Transglycosylase SLT domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1568_Mixed,_incl._Gram-negative_porin,_and_Transglycosylase_SLT_domain


id: CL:1570
description: Mixed, incl. Gram-negative porin, and Biological process involved in symbiotic interaction
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1570_Mixed,_incl._Gram-negative_porin,_and_Biological_process_involved_in_symbiotic_interaction


id: CL:1619
description: Mixed, incl. Quinone metabolic process, and Lipopolysaccharide metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1619_Mixed,_incl._Quinone_metabolic_process,_and_Lipopolysaccharide_metabolic_process


id: CL:1634
description: Mixed, incl. Lipopolysaccharide biosynthesis, and PD-(D/E)XK nuclease superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1634_Mixed,_incl._Lipopolysaccharide_biosynthesis,_and_PD-(D/E)XK_nuclease_superfamily


id: CL:1635
description: Mostly uncharacterized, incl. PD-(D/E)XK nuclease superfamily, and AsmA
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1635_Mostly_uncharacterized,_incl._PD-(D/E)XK_nuclease_superfamily,_and_AsmA


id: CL:1638
description: Mixed, incl. Bacterial surface antigen (D15), and Glycosyltransferase 2-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1638_Mixed,_incl._Bacterial_surface_antigen_(D15),_and_Glycosyltransferase_2-like


id: CL:1659
description: PD-(D/E)XK nuclease superfamily, and AsmA
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1659_PD-(D/E)XK_nuclease_superfamily,_and_AsmA


id: CL:1672
description: Mixed, incl. Glycosyl transferase 4-like, and Glycosyl transferase, family 9
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1672_Mixed,_incl._Glycosyl_transferase_4-like,_and_Glycosyl_transferase,_family_9


id: CL:1673
description: Glycosyl transferase, family 9, and Glycosyl transferase 4-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1673_Glycosyl_transferase,_family_9,_and_Glycosyl_transferase_4-like


id: CL:1682
description: NodB homology domain, and Glycosyltransferase 2-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1682_NodB_homology_domain,_and_Glycosyltransferase_2-like


id: CL:1696
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1696_Mixed,_incl._Liposaccharide_metabolic_process,_and_Gram-negative-bacterium-type_cell_outer_membrane_assembly

description:
  Mixed, incl. Liposaccharide metabolic process, and Gram-negative-bacterium-type cell outer membrane assembly


id: CL:1697
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1697_Mixed,_incl._Gram-negative-bacterium-type_cell_outer_membrane_assembly,_and_Glycolipid_biosynthetic_process

description:
  Mixed, incl. Gram-negative-bacterium-type cell outer membrane assembly, and Glycolipid biosynthetic process


id: CL:1698
description: Mixed, incl. Gram-negative-bacterium-type cell outer membrane assembly, and Lipid A biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1698_Mixed,_incl._Gram-negative-bacterium-type_cell_outer_membrane_assembly,_and_Lipid_A_biosynthesis


id: CL:1701
description: Lipid A biosynthesis, and Lipopolysaccharide biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1701_Lipid_A_biosynthesis,_and_Lipopolysaccharide_biosynthesis


id: CL:1702
description: Lipopolysaccharide biosynthesis, and SIS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1702_Lipopolysaccharide_biosynthesis,_and_SIS_domain


id: CL:1728
description: Gram-negative-bacterium-type cell outer membrane assembly, and Permease LptG/LptF-related
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1728_Gram-negative-bacterium-type_cell_outer_membrane_assembly,_and_Permease_LptG/LptF-related


id: CL:1731
description: Protein insertion into membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1731_Protein_insertion_into_membrane


id: CL:1745
description: Permease LptG/LptF-related, and Lipopolysaccharide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1745_Permease_LptG/LptF-related,_and_Lipopolysaccharide_transport


id: CL:1757
description: Mixed, incl. TonB/TolA, C-terminal, and Biopolymer transport protein ExbD/TolR
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1757_Mixed,_incl._TonB/TolA,_C-terminal,_and_Biopolymer_transport_protein_ExbD/TolR


id: CL:1759
description: TonB, C-terminal, and Biopolymer transport protein ExbD/TolR
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1759_TonB,_C-terminal,_and_Biopolymer_transport_protein_ExbD/TolR


id: CL:1775
description: Mixed, incl. Protein import, and TonB/TolA, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1775_Mixed,_incl._Protein_import,_and_TonB/TolA,_C-terminal


id: CL:1786
description: Mixed, incl. Porin activity, and Lysin motif
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1786_Mixed,_incl._Porin_activity,_and_Lysin_motif


id: CL:1801
description: Mixed, incl. Peptidoglycan transport, and Methyltransferase type 11
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1801_Mixed,_incl._Peptidoglycan_transport,_and_Methyltransferase_type_11


id: CL:1812
description: Mostly uncharacterized, incl. Cytochrome complex assembly, and Protein phosphatase
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1812_Mostly_uncharacterized,_incl._Cytochrome_complex_assembly,_and_Protein_phosphatase


id: CL:1814
description: Mixed, incl. Cytochrome complex assembly, and Cytochrome b561, bacterial/Ni-hydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1814_Mixed,_incl._Cytochrome_complex_assembly,_and_Cytochrome_b561,_bacterial/Ni-hydrogenase


id: CL:1816
description: Mixed, incl. Cytochrome complex assembly, and Ribonucleotide reductase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1816_Mixed,_incl._Cytochrome_complex_assembly,_and_Ribonucleotide_reductase-like


id: CL:184
description: L28p-like, and Zinc-binding ribosomal protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:184_L28p-like,_and_Zinc-binding_ribosomal_protein


id: CL:1849
description: Mixed, incl. tRNA methylation, and Redoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1849_Mixed,_incl._tRNA_methylation,_and_Redoxin


id: CL:1850
description: Mixed, incl. tRNA methylation, and Selenotransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1850_Mixed,_incl._tRNA_methylation,_and_Selenotransferase_activity


id: CL:1865
description: Mixed, incl. Redoxin, and Haloacid dehalogenase-like hydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1865_Mixed,_incl._Redoxin,_and_Haloacid_dehalogenase-like_hydrolase


id: CL:1876
description: Porphyrin-containing compound biosynthetic process, and Quinone metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1876_Porphyrin-containing_compound_biosynthetic_process,_and_Quinone_metabolic_process


id: CL:1877
description: Quinone metabolic process, and Phosphoglycolate phosphatase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1877_Quinone_metabolic_process,_and_Phosphoglycolate_phosphatase_activity


id: CL:1878
description: Quinone metabolic process, and Flavoprotein
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1878_Quinone_metabolic_process,_and_Flavoprotein


id: CL:1880
description: Ubiquinone biosynthesis, and Flavoprotein
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1880_Ubiquinone_biosynthesis,_and_Flavoprotein


id: CL:1903
description: Phosphoglycolate phosphatase activity, and Deoxyribonucleotide catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1903_Phosphoglycolate_phosphatase_activity,_and_Deoxyribonucleotide_catabolic_process


id: CL:1914
description: Porphyrin-containing compound biosynthetic process, and Entericidin A/B
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1914_Porphyrin-containing_compound_biosynthetic_process,_and_Entericidin_A/B


id: CL:1915
description: Porphyrin-containing compound biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1915_Porphyrin-containing_compound_biosynthetic_process


id: CL:1929
description: Protoporphyrinogen IX metabolic process, and Coproporphyrinogen oxidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1929_Protoporphyrinogen_IX_metabolic_process,_and_Coproporphyrinogen_oxidase_activity


id: CL:1940
description: Mixed, incl. Entericidin A/B, and DNA integration
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1940_Mixed,_incl._Entericidin_A/B,_and_DNA_integration


id: CL:1949
description: Mixed, incl. Beta-lactamase/transpeptidase-like, and Protein lipoylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1949_Mixed,_incl._Beta-lactamase/transpeptidase-like,_and_Protein_lipoylation


id: CL:1950
description: Mixed, incl. Beta-lactamase/transpeptidase-like, and Protein lipoylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1950_Mixed,_incl._Beta-lactamase/transpeptidase-like,_and_Protein_lipoylation


id: CL:1952
description: Protein lipoylation, and Serine aminopeptidase, S33
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1952_Protein_lipoylation,_and_Serine_aminopeptidase,_S33


id: CL:1972
description: Mixed, incl. Ami_2, and Cytochrome C assembly protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1972_Mixed,_incl._Ami_2,_and_Cytochrome_C_assembly_protein


id: CL:1987
description: Mixed, incl. Maf-like protein, and Ami_2
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1987_Mixed,_incl._Maf-like_protein,_and_Ami_2


id: CL:1989
description: Mixed, incl. Maf-like protein, and Ami_2
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:1989_Mixed,_incl._Maf-like_protein,_and_Ami_2


id: CL:2015
description: Carbohydrate metabolic process, and Nucleotide-sugar metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2015_Carbohydrate_metabolic_process,_and_Nucleotide-sugar_metabolic_process


id: CL:2016
description: Carbohydrate metabolic process, and Nucleotide-sugar metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2016_Carbohydrate_metabolic_process,_and_Nucleotide-sugar_metabolic_process


id: CL:2017
description: Mixed, incl. Amino sugar and nucleotide sugar metabolism, and Polysaccharide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2017_Mixed,_incl._Amino_sugar_and_nucleotide_sugar_metabolism,_and_Polysaccharide_biosynthetic_process


id: CL:2018
description: Mixed, incl. Amino sugar and nucleotide sugar metabolism, and Glycosyl transferases group 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2018_Mixed,_incl._Amino_sugar_and_nucleotide_sugar_metabolism,_and_Glycosyl_transferases_group_1


id: CL:2019
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2019_Mixed,_incl._O-Antigen_nucleotide_sugar_biosynthesis,_and_Glycosyltransferase_subfamily_4-like,_N-terminal_domain

description:
  Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and Glycosyltransferase subfamily 4-like, N-terminal domain


id: CL:2021
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2021_Mixed,_incl._O-Antigen_nucleotide_sugar_biosynthesis,_and_Glycosyltransferase_subfamily_4-like,_N-terminal_domain

description:
  Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and Glycosyltransferase subfamily 4-like, N-terminal domain


id: CL:2022
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2022_Mixed,_incl._O-Antigen_nucleotide_sugar_biosynthesis,_and_Glycosyltransferase_subfamily_4-like,_N-terminal_domain

description:
  Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and Glycosyltransferase subfamily 4-like, N-terminal domain


id: CL:2023
description: Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and Bacterial sugar transferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2023_Mixed,_incl._O-Antigen_nucleotide_sugar_biosynthesis,_and_Bacterial_sugar_transferase


id: CL:2024
description: Nucleotide-sugar metabolic process, and Alpha-D-phosphohexomutase, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2024_Nucleotide-sugar_metabolic_process,_and_Alpha-D-phosphohexomutase,_C-terminal


id: CL:2026
description: Polyketide sugar unit biosynthesis, and NAD(P)-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2026_Polyketide_sugar_unit_biosynthesis,_and_NAD(P)-binding_domain


id: CL:2040
description: Alpha-D-phosphohexomutase, C-terminal, and Uridylyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2040_Alpha-D-phosphohexomutase,_C-terminal,_and_Uridylyltransferase_activity


id: CL:2049
description: Mixed, incl. Bacterial sugar transferase, and Glycosyltransferase Family 4
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2049_Mixed,_incl._Bacterial_sugar_transferase,_and_Glycosyltransferase_Family_4


id: CL:2051
description: Bacterial sugar transferase, and AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2051_Bacterial_sugar_transferase,_and_AAA_domain


id: CL:2061
description: Asparagine synthase, and Glycosyltransferase Family 4
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2061_Asparagine_synthase,_and_Glycosyltransferase_Family_4


id: CL:2070
description: Mixed, incl. Glycosyltransferase subfamily 4-like, N-terminal domain, and UDP binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2070_Mixed,_incl._Glycosyltransferase_subfamily_4-like,_N-terminal_domain,_and_UDP_binding_domain


id: CL:2084
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2084_Mixed,_incl._CoA-binding_domain,_and_acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine_O-acyltransferase_activity

description:
  Mixed, incl. CoA-binding domain, and acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity


id: CL:2104
description: Mixed, incl. Xylose isomerase-like TIM barrel, and Bacterial transferase hexapeptide (six repeats)
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2104_Mixed,_incl._Xylose_isomerase-like_TIM_barrel,_and_Bacterial_transferase_hexapeptide_(six_repeats)


id: CL:2118
description: Mixed, incl. Carbohydrate metabolism, and Glycosyl transferase, family 9
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2118_Mixed,_incl._Carbohydrate_metabolism,_and_Glycosyl_transferase,_family_9


id: CL:2122
description: Mixed, incl. Histidinol-phosphate phosphatase, and Glycosyltransferase 2-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2122_Mixed,_incl._Histidinol-phosphate_phosphatase,_and_Glycosyltransferase_2-like


id: CL:2134
description: Carbohydrate metabolism, and Carbohydrate kinase PfkB
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2134_Carbohydrate_metabolism,_and_Carbohydrate_kinase_PfkB


id: CL:2149
description: Mixed, incl. Glycosyl hydrolase, family 13, catalytic domain, and Glycogen biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2149_Mixed,_incl._Glycosyl_hydrolase,_family_13,_catalytic_domain,_and_Glycogen_biosynthesis


id: CL:2153
description: Glycosyl hydrolase, family 13, catalytic domain, and Glycogen biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2153_Glycosyl_hydrolase,_family_13,_catalytic_domain,_and_Glycogen_biosynthesis


id: CL:2178
description: Glycosyl transferase family 2, and Dolichyl-phosphate-mannose-protein mannosyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2178_Glycosyl_transferase_family_2,_and_Dolichyl-phosphate-mannose-protein_mannosyltransferase


id: CL:2201
description: Carbon metabolism, and Branched-chain amino acid biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2201_Carbon_metabolism,_and_Branched-chain_amino_acid_biosynthetic_process


id: CL:2203
description: Carbon metabolism, and Branched-chain amino acid biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2203_Carbon_metabolism,_and_Branched-chain_amino_acid_biosynthetic_process


id: CL:2204
description: Carbon metabolism, and Lactate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2204_Carbon_metabolism,_and_Lactate_metabolic_process


id: CL:2205
description: Citrate cycle (TCA cycle), and Lactate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2205_Citrate_cycle_(TCA_cycle),_and_Lactate_metabolic_process


id: CL:2207
description: Citrate cycle (TCA cycle), and ICL/PEPM domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2207_Citrate_cycle_(TCA_cycle),_and_ICL/PEPM_domain


id: CL:2211
description: Succinate dehydrogenase activity, and Tricarboxylic acid cycle
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2211_Succinate_dehydrogenase_activity,_and_Tricarboxylic_acid_cycle


id: CL:2213
description: Succinate dehydrogenase activity, and CoA-ligase
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2213_Succinate_dehydrogenase_activity,_and_CoA-ligase


id: CL:2227
description: Tricarboxylic acid cycle, and Lysine degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2227_Tricarboxylic_acid_cycle,_and_Lysine_degradation


id: CL:2245
description: Pyruvate dehydrogenase complex, and Dihydrolipoyl dehydrogenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2245_Pyruvate_dehydrogenase_complex,_and_Dihydrolipoyl_dehydrogenase_activity


id: CL:2263
description: AMP binding, and Oxaloacetate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2263_AMP_binding,_and_Oxaloacetate_metabolic_process


id: CL:2277
description: Mixed, incl. Lactate metabolic process, and 4Fe-4S dicluster domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2277_Mixed,_incl._Lactate_metabolic_process,_and_4Fe-4S_dicluster_domain


id: CL:2278
description: Lactate oxidation, and Cysteine-rich domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2278_Lactate_oxidation,_and_Cysteine-rich_domain


id: CL:2279
description: Mixed, incl. Cysteine-rich domain, and Malic enzyme, NAD-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2279_Mixed,_incl._Cysteine-rich_domain,_and_Malic_enzyme,_NAD-binding


id: CL:2281
description: Malic enzyme, NAD-binding, and 4Fe-4S dicluster domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2281_Malic_enzyme,_NAD-binding,_and_4Fe-4S_dicluster_domain


id: CL:229
description: Ribosomal small subunit biogenesis, and tRNA pseudouridine synthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:229_Ribosomal_small_subunit_biogenesis,_and_tRNA_pseudouridine_synthesis


id: CL:2307
description: Mixed, incl. ATP-grasp domain, and FMN-dependent dehydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2307_Mixed,_incl._ATP-grasp_domain,_and_FMN-dependent_dehydrogenase


id: CL:2321
description: Glycolysis, and Pentose-phosphate shunt
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2321_Glycolysis,_and_Pentose-phosphate_shunt


id: CL:2324
description: Glycolysis, and Glyceraldehyde 3-phosphate dehydrogenase, active site
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2324_Glycolysis,_and_Glyceraldehyde_3-phosphate_dehydrogenase,_active_site


id: CL:2326
description: Glycolysis, and Transketolase, C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2326_Glycolysis,_and_Transketolase,_C-terminal_domain


id: CL:2353
description: Branched-chain amino acid biosynthetic process, and D-amino acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2353_Branched-chain_amino_acid_biosynthetic_process,_and_D-amino_acid_metabolic_process


id: CL:2355
description: Valine, leucine and isoleucine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2355_Valine,_leucine_and_isoleucine_biosynthesis


id: CL:2370
description: L-valine transaminase activity, and Dehydratase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2370_L-valine_transaminase_activity,_and_Dehydratase_family


id: CL:2391
description: D-amino acid metabolic process, and Cys/Met metabolism PLP-dependent enzyme
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2391_D-amino_acid_metabolic_process,_and_Cys/Met_metabolism_PLP-dependent_enzyme


id: CL:2414
description: Mixed, incl. Fatty acid metabolic process, and Benzoate degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2414_Mixed,_incl._Fatty_acid_metabolic_process,_and_Benzoate_degradation


id: CL:2415
description: Mixed, incl. Fatty acid metabolic process, and Benzoate degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2415_Mixed,_incl._Fatty_acid_metabolic_process,_and_Benzoate_degradation


id: CL:2416
description: Mixed, incl. Fatty acid metabolic process, and Valine, leucine and isoleucine degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2416_Mixed,_incl._Fatty_acid_metabolic_process,_and_Valine,_leucine_and_isoleucine_degradation


id: CL:2418
description: Mixed, incl. Fatty acid metabolic process, and Valine, leucine and isoleucine degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2418_Mixed,_incl._Fatty_acid_metabolic_process,_and_Valine,_leucine_and_isoleucine_degradation


id: CL:2419
description: Mixed, incl. Fatty acid metabolic process, and Geraniol degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2419_Mixed,_incl._Fatty_acid_metabolic_process,_and_Geraniol_degradation


id: CL:2420
description: Mixed, incl. Enoyl-CoA hydratase/isomerase, and Acyl-CoA dehydrogenase, middle domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2420_Mixed,_incl._Enoyl-CoA_hydratase/isomerase,_and_Acyl-CoA_dehydrogenase,_middle_domain


id: CL:2421
description: Mixed, incl. Enoyl-CoA hydratase/isomerase, and Acyl-CoA dehydrogenase, middle domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2421_Mixed,_incl._Enoyl-CoA_hydratase/isomerase,_and_Acyl-CoA_dehydrogenase,_middle_domain


id: CL:2423
description: Mixed, incl. Enoyl-CoA hydratase/isomerase, and Thiolase, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2423_Mixed,_incl._Enoyl-CoA_hydratase/isomerase,_and_Thiolase,_N-terminal


id: CL:2424
description: Enoyl-CoA hydratase/isomerase, and Thiolase, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2424_Enoyl-CoA_hydratase/isomerase,_and_Thiolase,_N-terminal


id: CL:2426
description: Geraniol degradation, and Lipid oxidation
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2426_Geraniol_degradation,_and_Lipid_oxidation


id: CL:2428
description: Lipid oxidation, and Thiolase, N-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2428_Lipid_oxidation,_and_Thiolase,_N-terminal_domain


id: CL:2440
description: Geraniol degradation, and enoyl-CoA hydratase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2440_Geraniol_degradation,_and_enoyl-CoA_hydratase_activity


id: CL:2456
description: Enoyl-CoA hydratase/isomerase, and Carnitine 3-dehydrogenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2456_Enoyl-CoA_hydratase/isomerase,_and_Carnitine_3-dehydrogenase_activity


id: CL:2466
description: Electron transfer flavoprotein domain, and Acetyl-CoA dehydrogenase C-terminal like
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2466_Electron_transfer_flavoprotein_domain,_and_Acetyl-CoA_dehydrogenase_C-terminal_like


id: CL:2481
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2481_Mixed,_incl._Acetyl-CoA_dehydrogenase_C-terminal_like,_and_Enoyl-CoA_hydratase/isomerase,_conserved_site

description:
  Mixed, incl. Acetyl-CoA dehydrogenase C-terminal like, and Enoyl-CoA hydratase/isomerase, conserved site


id: CL:2490
description: Coenzyme A transferase, and Synthesis and degradation of ketone bodies
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2490_Coenzyme_A_transferase,_and_Synthesis_and_degradation_of_ketone_bodies


id: CL:2505
description: Catalase, clade 3, and MaoC-like dehydratase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2505_Catalase,_clade_3,_and_MaoC-like_dehydratase_domain


id: CL:2516
description: Mixed, incl. NADH:flavin oxidoreductase / NADH oxidase family, and Antibiotic biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2516_Mixed,_incl._NADH:flavin_oxidoreductase_/_NADH_oxidase_family,_and_Antibiotic_biosynthetic_process


id: CL:2519
description: Mixed, incl. NADH:flavin oxidoreductase/NADH oxidase, N-terminal, and enoyl-CoA hydratase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2519_Mixed,_incl._NADH:flavin_oxidoreductase/NADH_oxidase,_N-terminal,_and_enoyl-CoA_hydratase_activity


id: CL:2547
description: Mixed, incl. Thioesterase domain, and Benzoyl-CoA oxygenase, B subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2547_Mixed,_incl._Thioesterase_domain,_and_Benzoyl-CoA_oxygenase,_B_subunit


id: CL:2550
description: Mixed, incl. Benzoyl-CoA oxygenase, B subunit, and Shikimate kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2550_Mixed,_incl._Benzoyl-CoA_oxygenase,_B_subunit,_and_Shikimate_kinase


id: CL:2567
description: Thioesterase domain, and Aspartyl/glutamyl-tRNA amidotransferase subunit B-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2567_Thioesterase_domain,_and_Aspartyl/glutamyl-tRNA_amidotransferase_subunit_B-like


id: CL:257
description: Mixed, incl. mRNA processing, and Superoxide dismutase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:257_Mixed,_incl._mRNA_processing,_and_Superoxide_dismutase_activity


id: CL:2576
description: Fatty acid biosynthetic process, and Ketone body metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2576_Fatty_acid_biosynthetic_process,_and_Ketone_body_metabolic_process


id: CL:2599
description: Mixed, incl. Acyl transferase, and Acyl carrier activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2599_Mixed,_incl._Acyl_transferase,_and_Acyl_carrier_activity


id: CL:2611
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2611_Mixed,_incl._Long-chain_fatty_acid_metabolic_process,_and_Fumarylacetoacetate_(FAA)_hydrolase_family

description:
  Mixed, incl. Long-chain fatty acid metabolic process, and Fumarylacetoacetate (FAA) hydrolase family


id: CL:2613
description: Mixed, incl. Long-chain fatty acid metabolic process, and Aldo-keto reductase
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2613_Mixed,_incl._Long-chain_fatty_acid_metabolic_process,_and_Aldo-keto_reductase


id: CL:2615
description: Aldo-keto reductase, and Long-chain fatty acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2615_Aldo-keto_reductase,_and_Long-chain_fatty_acid_metabolic_process


id: CL:2635
description: TauD/TfdA-like domain, and Fumarylacetoacetase-like, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2635_TauD/TfdA-like_domain,_and_Fumarylacetoacetase-like,_C-terminal


id: CL:2654
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2654_Mixed,_incl._Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_NAD_or_NADP_as_acceptor,_and_Fumarylacetoacetase-like,_C-terminal

description:
  Mixed, incl. Oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, and Fumarylacetoacetase-like, C-terminal


id: CL:2655
description: Mixed, incl. Fumarylacetoacetase-like, C-terminal, and Xylene degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2655_Mixed,_incl._Fumarylacetoacetase-like,_C-terminal,_and_Xylene_degradation


id: CL:2657
description: Mixed, incl. Aldehyde dehydrogenase, cysteine active site, and Fumarylacetoacetase-like, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2657_Mixed,_incl._Aldehyde_dehydrogenase,_cysteine_active_site,_and_Fumarylacetoacetase-like,_C-terminal


id: CL:2659
description: 5-carboxymethyl-2-hydroxymuconate isomerase, and Urate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2659_5-carboxymethyl-2-hydroxymuconate_isomerase,_and_Urate_metabolic_process


id: CL:266
description: Mixed, incl. RNA polymerase, and DNA-templated transcription, termination
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:266_Mixed,_incl._RNA_polymerase,_and_DNA-templated_transcription,_termination


id: CL:2682
description: Mixed, incl. Aromatic hydrocarbons catabolism, and 2-oxopent-4-enoate hydratase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2682_Mixed,_incl._Aromatic_hydrocarbons_catabolism,_and_2-oxopent-4-enoate_hydratase_activity


id: CL:2700
description: Mixed, incl. Ethanol oxidation, and Iron-type alcohol dehydrogenase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2700_Mixed,_incl._Ethanol_oxidation,_and_Iron-type_alcohol_dehydrogenase-like


id: CL:2702
description: Ethanol oxidation, and Esterase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2702_Ethanol_oxidation,_and_Esterase-like


id: CL:2718
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2718_Mixed,_incl._Amino-acid_betaine_metabolic_process,_and_TRAP_transporter_solute_receptor,_TAXI_family

description:
  Mixed, incl. Amino-acid betaine metabolic process, and TRAP transporter solute receptor, TAXI family


id: CL:2733
description: Mixed, incl. Serine aminopeptidase, S33, and 2-hydroxy-6-oxonona-2,4-dienedioate hydrolase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2733_Mixed,_incl._Serine_aminopeptidase,_S33,_and_2-hydroxy-6-oxonona-2,4-dienedioate_hydrolase_activity


id: CL:2734
description: Mixed, incl. 2-hydroxy-6-oxonona-2,4-dienedioate hydrolase activity, and Serine aminopeptidase, S33
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2734_Mixed,_incl._2-hydroxy-6-oxonona-2,4-dienedioate_hydrolase_activity,_and_Serine_aminopeptidase,_S33


id: CL:2736
description: Serine aminopeptidase, S33, and 2-hydroxy-6-oxonona-2,4-dienedioate hydrolase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2736_Serine_aminopeptidase,_S33,_and_2-hydroxy-6-oxonona-2,4-dienedioate_hydrolase_activity


id: CL:2760
description: Mixed, incl. Regulation of secretion, and Acyl-CoA dehydrogenase, C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2760_Mixed,_incl._Regulation_of_secretion,_and_Acyl-CoA_dehydrogenase,_C-terminal_domain


id: CL:2778
description: Mixed, incl. Biotin metabolic process, and Ectoine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2778_Mixed,_incl._Biotin_metabolic_process,_and_Ectoine_metabolic_process


id: CL:2779
description: Mixed, incl. Biotin metabolic process, and Methyltransferase type 11
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2779_Mixed,_incl._Biotin_metabolic_process,_and_Methyltransferase_type_11


id: CL:2781
description: Biotin metabolic process, and Methyltransferase type 11
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2781_Biotin_metabolic_process,_and_Methyltransferase_type_11


id: CL:2783
description: Biotin biosynthesis, and adenosylmethionine-8-amino-7-oxononanoate transaminase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2783_Biotin_biosynthesis,_and_adenosylmethionine-8-amino-7-oxononanoate_transaminase_activity


id: CL:2805
description: Mixed, incl. beta-Alanine metabolism, and Putative cyclase
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2805_Mixed,_incl._beta-Alanine_metabolism,_and_Putative_cyclase


id: CL:2817
description: Ectoine metabolic process, and Aminotransferase class-III
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2817_Ectoine_metabolic_process,_and_Aminotransferase_class-III


id: CL:282
description: DNA-templated transcription, termination, and Inositol monophosphatase
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:282_DNA-templated_transcription,_termination,_and_Inositol_monophosphatase


id: CL:2831
description: Mixed, incl. Short-chain dehydrogenase/reductase, conserved site, and Sphingolipid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2831_Mixed,_incl._Short-chain_dehydrogenase/reductase,_conserved_site,_and_Sphingolipid_metabolism


id: CL:2832
description: Mixed, incl. Sphingolipid metabolism, and Short-chain dehydrogenase/reductase, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2832_Mixed,_incl._Sphingolipid_metabolism,_and_Short-chain_dehydrogenase/reductase,_conserved_site


id: CL:2834
description: Mixed, incl. Sphingolipid metabolism, and L-rhamnonate dehydratase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2834_Mixed,_incl._Sphingolipid_metabolism,_and_L-rhamnonate_dehydratase-like


id: CL:2836
description: Mixed, incl. Sphingolipid metabolism, and C-type lectin fold
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2836_Mixed,_incl._Sphingolipid_metabolism,_and_C-type_lectin_fold


id: CL:2866
description: Mixed, incl. Peptidase M24, and Phytanoyl-CoA dioxygenase (PhyH)
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2866_Mixed,_incl._Peptidase_M24,_and_Phytanoyl-CoA_dioxygenase_(PhyH)


id: CL:2879
description: Mixed, incl. Lipase activity, and LysE type translocator
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2879_Mixed,_incl._Lipase_activity,_and_LysE_type_translocator


id: CL:2888
description: Mixed, incl. Rieske [2Fe-2S] iron-sulphur domain, and Ring hydroxylating beta subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2888_Mixed,_incl._Rieske_[2Fe-2S]_iron-sulphur_domain,_and_Ring_hydroxylating_beta_subunit


id: CL:2890
description: Mixed, incl. Rieske [2Fe-2S] iron-sulphur domain, and Ring hydroxylating beta subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2890_Mixed,_incl._Rieske_[2Fe-2S]_iron-sulphur_domain,_and_Ring_hydroxylating_beta_subunit


id: CL:2891
description: Mixed, incl. Rieske [2Fe-2S] iron-sulphur domain, and Ring hydroxylating beta subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2891_Mixed,_incl._Rieske_[2Fe-2S]_iron-sulphur_domain,_and_Ring_hydroxylating_beta_subunit


id: CL:2892
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2892_Mixed,_incl._Transcription_regulator_HTH,_AraC-_type,_ligand_binding_domain-like,_and_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen,_NAD(P)H_as_one_donor,_and_incorporation_of_two_atoms_of_oxygen_into_one_donor

description:
  Mixed, incl. Transcription regulator HTH, AraC- type, ligand binding domain-like, and Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor


id: CL:2895
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2895_Mixed,_incl._Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen,_NAD(P)H_as_one_donor,_and_incorporation_of_two_atoms_of_oxygen_into_one_donor,_and_Putative_cyclase

description:
  Mixed, incl. Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor, and Putative cyclase


id: CL:2896
description: Mixed, incl. Putative cyclase, and Protein of unknown function DUF6537
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2896_Mixed,_incl._Putative_cyclase,_and_Protein_of_unknown_function_DUF6537


id: CL:2901
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2901_Mixed,_incl._Protein_of_unknown_function_DUF6537,_and_Pyruvate_flavodoxin/ferredoxin_oxidoreductase,_pyrimidine_binding_domain

description:
  Mixed, incl. Protein of unknown function DUF6537, and Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain


id: CL:2921
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2921_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen,_NAD(P)H_as_one_donor,_and_incorporation_of_two_atoms_of_oxygen_into_one_donor,_and_Caprolactam_degradation

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor, and Caprolactam degradation


id: CL:2936
description: Mixed, incl. Novobiocin biosynthesis, and Caprolactam degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2936_Mixed,_incl._Novobiocin_biosynthesis,_and_Caprolactam_degradation


id: CL:2946
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2946_Mixed,_incl._Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen,_NAD(P)H_as_one_donor,_and_incorporation_of_two_atoms_of_oxygen_into_one_donor,_and_Ethylbenzene_degradation

description:
  Mixed, incl. Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor, and Ethylbenzene degradation


id: CL:2948
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2948_Mixed,_incl._Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen,_NAD(P)H_as_one_donor,_and_incorporation_of_two_atoms_of_oxygen_into_one_donor,_and_Ethylbenzene_degradation

description:
  Mixed, incl. Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor, and Ethylbenzene degradation


id: CL:2950
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2950_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen,_NAD(P)H_as_one_donor,_and_incorporation_of_two_atoms_of_oxygen_into_one_donor,_and_Ethylbenzene_degradation

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor, and Ethylbenzene degradation


id: CL:296
description: tRNA aminoacylation, and Topoisomerase
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:296_tRNA_aminoacylation,_and_Topoisomerase


id: CL:2974
description: Mixed, incl. Ring hydroxylating beta subunit, and Flavin reductase like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2974_Mixed,_incl._Ring_hydroxylating_beta_subunit,_and_Flavin_reductase_like_domain


id: CL:299
description: Aminoacyl-tRNA synthetase, class I, conserved site, and phenylalanyl-tRNA aminoacylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:299_Aminoacyl-tRNA_synthetase,_class_I,_conserved_site,_and_phenylalanyl-tRNA_aminoacylation


id: CL:2990
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:2990_Mixed,_incl._Aromatic-ring-hydroxylating_dioxygenase,_2Fe-2S-binding_site,_and_Glutamine_amidotransferase_class-I

description:
  Mixed, incl. Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site, and Glutamine amidotransferase class-I


id: CL:3012
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3012_Mixed,_incl._Xylose_isomerase-like_superfamily,_and_HTH-type_transcriptional_repressor_NicS,_C-terminal

description:
  Mixed, incl. Xylose isomerase-like superfamily, and HTH-type transcriptional repressor NicS, C-terminal


id: CL:302
description: Aminoacyl-tRNA synthetase, class Ia, anticodon-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:302_Aminoacyl-tRNA_synthetase,_class_Ia,_anticodon-binding


id: CL:3023
description: Mixed, incl. Electron transport chain, and Sulfur relay system
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3023_Mixed,_incl._Electron_transport_chain,_and_Sulfur_relay_system


id: CL:3024
description: Mixed, incl. Electron transport chain, and Sulfur relay system
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3024_Mixed,_incl._Electron_transport_chain,_and_Sulfur_relay_system


id: CL:3025
description: Mixed, incl. Electron transport chain, and Prosthetic group metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3025_Mixed,_incl._Electron_transport_chain,_and_Prosthetic_group_metabolic_process


id: CL:3026
description: Mixed, incl. Electron transport chain, and Prosthetic group metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3026_Mixed,_incl._Electron_transport_chain,_and_Prosthetic_group_metabolic_process


id: CL:3028
description: Electron transfer activity, and Oxidative phosphorylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3028_Electron_transfer_activity,_and_Oxidative_phosphorylation


id: CL:3029
description: Electron transfer activity, and Quinone
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3029_Electron_transfer_activity,_and_Quinone


id: CL:3030
description: Electron transfer activity, and Quinone
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3030_Electron_transfer_activity,_and_Quinone


id: CL:3031
description: Oxidoreduction-driven active transmembrane transporter activity, and Quinone
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3031_Oxidoreduction-driven_active_transmembrane_transporter_activity,_and_Quinone


id: CL:3033
description: NADH dehydrogenase activity, and Ubiquinol-cytochrome-c reductase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3033_NADH_dehydrogenase_activity,_and_Ubiquinol-cytochrome-c_reductase_activity


id: CL:3035
description: Quinone, and NADH dehydrogenase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3035_Quinone,_and_NADH_dehydrogenase_complex


id: CL:3038
description: Quinone, and NADH-quinone oxidoreductase subunit E-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3038_Quinone,_and_NADH-quinone_oxidoreductase_subunit_E-like


id: CL:3066
description: ATP synthesis coupled electron transport, and SLBB domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3066_ATP_synthesis_coupled_electron_transport,_and_SLBB_domain


id: CL:3082
description: Cytochrome-c oxidase activity, and Rieske iron-sulphur protein, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3082_Cytochrome-c_oxidase_activity,_and_Rieske_iron-sulphur_protein,_C-terminal


id: CL:3092
description: Copper, and Cytochrome c oxidase subunit III
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3092_Copper,_and_Cytochrome_c_oxidase_subunit_III


id: CL:3102
description: Mixed, incl. Cytochrome c, and Anaerobic respiration
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3102_Mixed,_incl._Cytochrome_c,_and_Anaerobic_respiration


id: CL:3104
description: Mixed, incl. GMC oxidoreductase, and Purine nucleobase transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3104_Mixed,_incl._GMC_oxidoreductase,_and_Purine_nucleobase_transport


id: CL:3107
description: Mixed, incl. Anaerobic respiration, and Aspartate decarboxylase-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3107_Mixed,_incl._Anaerobic_respiration,_and_Aspartate_decarboxylase-like_domain_superfamily


id: CL:3124
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3124_Mixed,_incl._Iron_ion_transmembrane_transporter_activity,_and_Oxidoreductase_molybdopterin_binding_domain

description:
  Mixed, incl. Iron ion transmembrane transporter activity, and Oxidoreductase molybdopterin binding domain


id: CL:3136
description: Mixed, incl. Respiratory chain complex IV, and Cytochrome c oxidase, monohaem subunit/FixO
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3136_Mixed,_incl._Respiratory_chain_complex_IV,_and_Cytochrome_c_oxidase,_monohaem_subunit/FixO


id: CL:3138
description: Respiratory chain, and Cytochrome c oxidase, monohaem subunit/FixO
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3138_Respiratory_chain,_and_Cytochrome_c_oxidase,_monohaem_subunit/FixO


id: CL:3158
description: Mixed, incl. Cytochrome c-like domain, and UbiA prenyltransferase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3158_Mixed,_incl._Cytochrome_c-like_domain,_and_UbiA_prenyltransferase_family


id: CL:3160
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3160_Mixed,_incl._UbiA_prenyltransferase_family,_and_Biological_process_involved_in_symbiotic_interaction

description:
  Mixed, incl. UbiA prenyltransferase family, and Biological process involved in symbiotic interaction


id: CL:3184
description: Mixed, incl. Prosthetic group metabolic process, and Inorganic anion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3184_Mixed,_incl._Prosthetic_group_metabolic_process,_and_Inorganic_anion_transport


id: CL:3186
description: Mixed, incl. Prosthetic group metabolic process, and Molybdate ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3186_Mixed,_incl._Prosthetic_group_metabolic_process,_and_Molybdate_ion_transport


id: CL:3189
description: Prosthetic group metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3189_Prosthetic_group_metabolic_process


id: CL:3191
description: Prosthetic group metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3191_Prosthetic_group_metabolic_process


id: CL:3214
description: Mixed, incl. Formate dehydrogenase (NAD+) activity, and Thioredoxin-like [2Fe-2S] ferredoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3214_Mixed,_incl._Formate_dehydrogenase_(NAD+)_activity,_and_Thioredoxin-like_[2Fe-2S]_ferredoxin


id: CL:3216
description: Formate dehydrogenase (NAD+) activity, and Nitrate assimilation
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3216_Formate_dehydrogenase_(NAD+)_activity,_and_Nitrate_assimilation


id: CL:3229
description: NADH dehydrogenase complex, and NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3229_NADH_dehydrogenase_complex,_and_NADH-ubiquinone_oxidoreductase-G_iron-sulfur_binding_region


id: CL:3240
description: Mixed, incl. Sulfate transport, and Cysteine biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3240_Mixed,_incl._Sulfate_transport,_and_Cysteine_biosynthetic_process


id: CL:3242
description: Sulfate transport, and Sulfate reduction
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3242_Sulfate_transport,_and_Sulfate_reduction


id: CL:3262
description: Flavoprotein pyridine nucleotide cytochrome reductase, and NADH oxidation
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3262_Flavoprotein_pyridine_nucleotide_cytochrome_reductase,_and_NADH_oxidation


id: CL:3273
description: Cation:cation antiporter activity, and Proton-conducting membrane transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3273_Cation:cation_antiporter_activity,_and_Proton-conducting_membrane_transporter


id: CL:3286
description: Mixed, incl. Iron-sulfur cluster assembly, and Transcription regulator Rrf2
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3286_Mixed,_incl._Iron-sulfur_cluster_assembly,_and_Transcription_regulator_Rrf2


id: CL:3287
description: Iron-sulfur cluster assembly, and Transcription regulator Rrf2
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3287_Iron-sulfur_cluster_assembly,_and_Transcription_regulator_Rrf2


id: CL:3289
description: Iron-sulfur cluster assembly, and Transcription regulator Rrf2
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3289_Iron-sulfur_cluster_assembly,_and_Transcription_regulator_Rrf2


id: CL:3307
description: Iron-sulfur cluster assembly complex, and Cysteine desulfurase
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3307_Iron-sulfur_cluster_assembly_complex,_and_Cysteine_desulfurase


id: CL:3327
description: Oxygen binding, and Iron-dependent Transcriptional regulator
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3327_Oxygen_binding,_and_Iron-dependent_Transcriptional_regulator


id: CL:3343
description: Mixed, incl. ATPase, dynein-related, AAA domain, and Dienelactone hydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3343_Mixed,_incl._ATPase,_dynein-related,_AAA_domain,_and_Dienelactone_hydrolase


id: CL:335
description: SRP54-type protein, helical bundle domain, and Protein carrier chaperone
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:335_SRP54-type_protein,_helical_bundle_domain,_and_Protein_carrier_chaperone


id: CL:3356
description: Mixed, incl. Heme catabolic process, and Patatin-like phospholipase
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3356_Mixed,_incl._Heme_catabolic_process,_and_Patatin-like_phospholipase


id: CL:3358
description: Mixed, incl. Patatin-like phospholipase, and Poly-hydroxybutyrate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3358_Mixed,_incl._Patatin-like_phospholipase,_and_Poly-hydroxybutyrate_metabolic_process


id: CL:3377
description: Heme catabolic process, and 4Fe-4S binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3377_Heme_catabolic_process,_and_4Fe-4S_binding_domain


id: CL:3387
description: Mixed, incl. Polyamine biosynthetic process, and Protocatechuate 3,4-dioxygenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3387_Mixed,_incl._Polyamine_biosynthetic_process,_and_Protocatechuate_3,4-dioxygenase_activity


id: CL:3388
description: Mixed, incl. Polyamine biosynthetic process, and Protocatechuate 3,4-dioxygenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3388_Mixed,_incl._Polyamine_biosynthetic_process,_and_Protocatechuate_3,4-dioxygenase_activity


id: CL:3389
description: Polyamine biosynthetic process, and Response to osmotic stress
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3389_Polyamine_biosynthetic_process,_and_Response_to_osmotic_stress


id: CL:3401
description: Protocatechuate 3,4-dioxygenase activity, and AhpD-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3401_Protocatechuate_3,4-dioxygenase_activity,_and_AhpD-like


id: CL:3412
description: Mixed, incl. Succinate semialdehyde dehydrogenase, and HI0933-like insert domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3412_Mixed,_incl._Succinate_semialdehyde_dehydrogenase,_and_HI0933-like_insert_domain_superfamily


id: CL:3430
description: Mixed, incl. ABC transporter substrate binding protein, and Asp/Glu racemase
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3430_Mixed,_incl._ABC_transporter_substrate_binding_protein,_and_Asp/Glu_racemase


id: CL:3431
description: Mixed, incl. Asp/Glu racemase, and Glyoxalase-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3431_Mixed,_incl._Asp/Glu_racemase,_and_Glyoxalase-like_domain


id: CL:3433
description: Mixed, incl. Glyoxalase-like domain, and Acyl-coenzyme A thioesterase 13
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3433_Mixed,_incl._Glyoxalase-like_domain,_and_Acyl-coenzyme_A_thioesterase_13


id: CL:3450
description: Mixed, incl. ABC transporter substrate binding protein, and Spermidine synthase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3450_Mixed,_incl._ABC_transporter_substrate_binding_protein,_and_Spermidine_synthase_activity


id: CL:3463
description: Mixed, incl. Signaling, and Cilium
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3463_Mixed,_incl._Signaling,_and_Cilium


id: CL:3469
description: Cilium, and Bacterial chemotaxis
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3469_Cilium,_and_Bacterial_chemotaxis


id: CL:3479
description: Bacterial-type flagellum basal body, rod, and Flagellar hook-basal body protein, FlgE/F/G
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3479_Bacterial-type_flagellum_basal_body,_rod,_and_Flagellar_hook-basal_body_protein,_FlgE/F/G


id: CL:3539
description: Mixed, incl. FlhB HrpN YscU SpaS Family, and FliK-like, C-terminal domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3539_Mixed,_incl._FlhB_HrpN_YscU_SpaS_Family,_and_FliK-like,_C-terminal_domain_superfamily


id: CL:354
description: Pyrimidine nucleoside triphosphate metabolic process, and RelA/SpoT
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:354_Pyrimidine_nucleoside_triphosphate_metabolic_process,_and_RelA/SpoT


id: CL:356
description: Deoxyribonucleotide biosynthetic process, and ATP cone domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:356_Deoxyribonucleotide_biosynthetic_process,_and_ATP_cone_domain


id: CL:3561
description: CheW-like domain, and Chemotaxis
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3561_CheW-like_domain,_and_Chemotaxis


id: CL:3585
description: Signaling, and Transcription regulator HTH, AraC- type
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3585_Signaling,_and_Transcription_regulator_HTH,_AraC-_type


id: CL:3586
description: Signaling, and Sigma-54, DNA binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3586_Signaling,_and_Sigma-54,_DNA_binding_domain


id: CL:3591
description: Phosphorelay signal transduction system, and PAS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3591_Phosphorelay_signal_transduction_system,_and_PAS_domain


id: CL:3593
description: Signal transduction, and Transcription regulator HTH, AraC- type
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3593_Signal_transduction,_and_Transcription_regulator_HTH,_AraC-_type


id: CL:3596
description: His Kinase A (phosphoacceptor) domain, and cheY-homologous receiver domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3596_His_Kinase_A_(phosphoacceptor)_domain,_and_cheY-homologous_receiver_domain


id: CL:3598
description: Mixed, incl. PAS domain, and EAL domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3598_Mixed,_incl._PAS_domain,_and_EAL_domain


id: CL:3601
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3601_Mixed,_incl._Motif_C-terminal_to_PAS_motifs_(likely_to_contribute_to_PAS_structural_domain),_and_7TMR-DISM_extracellular_2

description:
  Mixed, incl. Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain), and 7TMR-DISM extracellular 2


id: CL:3626
description: His Kinase A (phosphoacceptor) domain, and Transcriptional regulatory protein, C terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3626_His_Kinase_A_(phosphoacceptor)_domain,_and_Transcriptional_regulatory_protein,_C_terminal


id: CL:3668
description: Sigma-54, DNA binding domain, and Bacterial regulatory protein, Fis family
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3668_Sigma-54,_DNA_binding_domain,_and_Bacterial_regulatory_protein,_Fis_family


id: CL:3677
description: Mixed, incl. DoxX, and Methylthiotransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3677_Mixed,_incl._DoxX,_and_Methylthiotransferase


id: CL:3698
description: Regulation of nitrogen utilization, and PAS fold
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3698_Regulation_of_nitrogen_utilization,_and_PAS_fold


id: CL:3719
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3719_Mostly_uncharacterized,_incl._Regulation_of_cell_killing,_and_Type_II_secretion_system_(T2SS),_protein_F

description:
  Mostly uncharacterized, incl. Regulation of cell killing, and Type II secretion system (T2SS), protein F


id: CL:3723
description: Mixed, incl. Type II secretion system (T2SS), protein F, and Regulation of cell killing
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3723_Mixed,_incl._Type_II_secretion_system_(T2SS),_protein_F,_and_Regulation_of_cell_killing


id: CL:3724
description: Mixed, incl. TadE-like protein, and Type II secretion system (T2SS), protein F
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3724_Mixed,_incl._TadE-like_protein,_and_Type_II_secretion_system_(T2SS),_protein_F


id: CL:3727
description: Type II secretion system (T2SS), protein F, and Regulation of cell division
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3727_Type_II_secretion_system_(T2SS),_protein_F,_and_Regulation_of_cell_division


id: CL:3740
description: TadE-like protein, and Type IV leader peptidase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3740_TadE-like_protein,_and_Type_IV_leader_peptidase_family


id: CL:3750
description: Mixed, incl. Type II secretion system protein GspF domain, and SAF domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3750_Mixed,_incl._Type_II_secretion_system_protein_GspF_domain,_and_SAF_domain


id: CL:3753
description: Type II secretion system protein GspF domain, and SAF domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3753_Type_II_secretion_system_protein_GspF_domain,_and_SAF_domain


id: CL:3776
description: Mostly uncharacterized, incl. GMP salvage, and ABC transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3776_Mostly_uncharacterized,_incl._GMP_salvage,_and_ABC_transporter


id: CL:3778
description: Mixed, incl. Lon protease, N-terminal domain, and Chromosome condensation
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3778_Mixed,_incl._Lon_protease,_N-terminal_domain,_and_Chromosome_condensation


id: CL:3781
description: Mixed, incl. Chromosome condensation, and Ribonucleotide reductase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3781_Mixed,_incl._Chromosome_condensation,_and_Ribonucleotide_reductase-like


id: CL:381
description: Band 7 domain, and ATP-dependent peptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:381_Band_7_domain,_and_ATP-dependent_peptidase_activity


id: CL:3814
description: Mixed, incl. Protein secretion by the type II secretion system, and Bacterial secretion system
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3814_Mixed,_incl._Protein_secretion_by_the_type_II_secretion_system,_and_Bacterial_secretion_system


id: CL:3815
description: Mixed, incl. Protein secretion by the type II secretion system, and Pilus assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3815_Mixed,_incl._Protein_secretion_by_the_type_II_secretion_system,_and_Pilus_assembly


id: CL:3816
description: Mixed, incl. Protein secretion by the type II secretion system, and Horizontal gene transfer
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3816_Mixed,_incl._Protein_secretion_by_the_type_II_secretion_system,_and_Horizontal_gene_transfer


id: CL:3817
description: Protein secretion by the type II secretion system, and Response to host
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3817_Protein_secretion_by_the_type_II_secretion_system,_and_Response_to_host


id: CL:3819
description: Pilin-like, and Type II secretion system GspF domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3819_Pilin-like,_and_Type_II_secretion_system_GspF_domain_superfamily


id: CL:3840
description: Mixed, incl. Horizontal gene transfer, and Type IV leader peptidase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3840_Mixed,_incl._Horizontal_gene_transfer,_and_Type_IV_leader_peptidase_family


id: CL:3851
description: Mixed, incl. Pilus assembly, and Prokaryotic N-terminal methylation motif
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3851_Mixed,_incl._Pilus_assembly,_and_Prokaryotic_N-terminal_methylation_motif


id: CL:3864
description: Mixed, incl. MacB, ATP-binding domain, and Biosynthesis of unsaturated fatty acids
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3864_Mixed,_incl._MacB,_ATP-binding_domain,_and_Biosynthesis_of_unsaturated_fatty_acids


id: CL:3884
description: Mixed, incl. Protein transmembrane transport, and Autotransporter beta-domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3884_Mixed,_incl._Protein_transmembrane_transport,_and_Autotransporter_beta-domain


id: CL:3885
description: Mixed, incl. Protein transmembrane transport, and Autotransporter beta-domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3885_Mixed,_incl._Protein_transmembrane_transport,_and_Autotransporter_beta-domain


id: CL:3887
description: Mixed, incl. Autotransporter beta-domain, and Pertussis
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3887_Mixed,_incl._Autotransporter_beta-domain,_and_Pertussis


id: CL:3888
description: Mixed, incl. Cellulose binding, and BamE-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3888_Mixed,_incl._Cellulose_binding,_and_BamE-like


id: CL:3889
description: Mixed, incl. BamE-like, and Dolichyl-phosphate-mannose-protein mannosyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3889_Mixed,_incl._BamE-like,_and_Dolichyl-phosphate-mannose-protein_mannosyltransferase


id: CL:3892
description: Mixed, incl. BamE-like, and Dolichyl-phosphate-mannose-protein mannosyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3892_Mixed,_incl._BamE-like,_and_Dolichyl-phosphate-mannose-protein_mannosyltransferase


id: CL:3908
description: Cellulose binding, and POTRA domain, ShlB-type
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3908_Cellulose_binding,_and_POTRA_domain,_ShlB-type


id: CL:3918
description: Mixed, incl. Outer membrane autotransporter barrel, and Pertussis
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3918_Mixed,_incl._Outer_membrane_autotransporter_barrel,_and_Pertussis


id: CL:3920
description: Pectin lyase fold/virulence factor, and Autotransporter beta-domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3920_Pectin_lyase_fold/virulence_factor,_and_Autotransporter_beta-domain


id: CL:3948
description: Protein transmembrane transport, and Cytolysis
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3948_Protein_transmembrane_transport,_and_Cytolysis


id: CL:3950
description: Protein transmembrane transport, and Protein refolding
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3950_Protein_transmembrane_transport,_and_Protein_refolding


id: CL:3954
description: Protein transmembrane transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3954_Protein_transmembrane_transport


id: CL:3968
description: Protein transmembrane transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3968_Protein_transmembrane_transport


id: CL:397
description: Mixed, incl. Glucosyltransferase activity, and Pseudouridine synthase, RsuA/RluB/E/F
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:397_Mixed,_incl._Glucosyltransferase_activity,_and_Pseudouridine_synthase,_RsuA/RluB/E/F


id: CL:3992
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3992_Mixed,_incl._Autotransporter_beta-domain,_and_CHASE2_is_an_extracellular_sensory_domain,_which_is_present_in_various_classes_of_transmembrane_receptors_that_are_parts_of_signal_transduction_pathways_in_bacteria._Specifically,_CHASE2_domains_are_found_in_histidine_kinases,_adenylate_cyclases,_...

description:
  Mixed, incl. Autotransporter beta-domain, and CHASE2 is an extracellular sensory domain, which is present in various classes of transmembrane receptors that are parts of signal transduction pathways in bacteria. Specifically, CHASE2 domains are found in histidine kinases, adenylate cyclases, ...


id: CL:3993
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:3993_Mixed,_incl._CHASE2_is_an_extracellular_sensory_domain,_which_is_present_in_various_classes_of_transmembrane_receptors_that_are_parts_of_signal_transduction_pathways_in_bacteria._Specifically,_CHASE2_domains_are_found_in_histidine_kinases,_adenylate_cyclases,_...,_and_Peptidase_M48

description:
  Mixed, incl. CHASE2 is an extracellular sensory domain, which is present in various classes of transmembrane receptors that are parts of signal transduction pathways in bacteria. Specifically, CHASE2 domains are found in histidine kinases, adenylate cyclases, ..., and Peptidase M48


id: CL:4004
description: Mixed, incl. Autotransporter beta-domain, and Bacterial-type flagellum organization
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4004_Mixed,_incl._Autotransporter_beta-domain,_and_Bacterial-type_flagellum_organization


id: CL:4015
description: Mixed, incl. Amino acid ABC transporter, permease protein, 3-TM domain, and Phosphate ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4015_Mixed,_incl._Amino_acid_ABC_transporter,_permease_protein,_3-TM_domain,_and_Phosphate_ion_transport


id: CL:4017
description: Mixed, incl. Phosphate ion transport, and Organic phosphonate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4017_Mixed,_incl._Phosphate_ion_transport,_and_Organic_phosphonate_transport


id: CL:4045
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4045_Amino_acid_ABC_transporter,_permease_protein,_3-TM_domain,_and_Bacterial_periplasmic_substrate-binding_proteins

description:
  Amino acid ABC transporter, permease protein, 3-TM domain, and Bacterial periplasmic substrate-binding proteins


id: CL:4046
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4046_Amino_acid_ABC_transporter,_permease_protein,_3-TM_domain,_and_Bacterial_periplasmic_substrate-binding_proteins

description:
  Amino acid ABC transporter, permease protein, 3-TM domain, and Bacterial periplasmic substrate-binding proteins


id: CL:4059
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4059_Bacterial_periplasmic_substrate-binding_proteins,_and_Amino_acid_ABC_transporter,_permease_protein,_3-TM_domain

description:
  Bacterial periplasmic substrate-binding proteins, and Amino acid ABC transporter, permease protein, 3-TM domain


id: CL:4069
description: Mixed, incl. Metal ion transmembrane transporter activity, and Gated channel activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4069_Mixed,_incl._Metal_ion_transmembrane_transporter_activity,_and_Gated_channel_activity


id: CL:4070
description: Mixed, incl. Gated channel activity, and Potassium ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4070_Mixed,_incl._Gated_channel_activity,_and_Potassium_ion_transport


id: CL:4072
description: Mixed, incl. Gated channel activity, and Amino acid antiporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4072_Mixed,_incl._Gated_channel_activity,_and_Amino_acid_antiporter


id: CL:4075
description: Mixed, incl. Aquaporin-like, and Citrate transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4075_Mixed,_incl._Aquaporin-like,_and_Citrate_transporter


id: CL:4091
description: Mixed, incl. Arginine catabolic process, and Amino acid antiporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4091_Mixed,_incl._Arginine_catabolic_process,_and_Amino_acid_antiporter


id: CL:4111
description: Potassium ion transport, and NADH:flavin oxidoreductase/NADH oxidase, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4111_Potassium_ion_transport,_and_NADH:flavin_oxidoreductase/NADH_oxidase,_N-terminal


id: CL:4127
description: Mixed, incl. Antiport, and SnoaL-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4127_Mixed,_incl._Antiport,_and_SnoaL-like_domain


id: CL:4145
description: Mixed, incl. Glycerophospholipid metabolism, and Aerobic electron transport chain
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4145_Mixed,_incl._Glycerophospholipid_metabolism,_and_Aerobic_electron_transport_chain


id: CL:4146
description: Mixed, incl. Glycerophospholipid metabolism, and Aerobic electron transport chain
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4146_Mixed,_incl._Glycerophospholipid_metabolism,_and_Aerobic_electron_transport_chain


id: CL:4147
description: Mixed, incl. Glycerophospholipid metabolism, and Aerobic electron transport chain
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4147_Mixed,_incl._Glycerophospholipid_metabolism,_and_Aerobic_electron_transport_chain


id: CL:4149
description: Mixed, incl. Phospholipid metabolism, and Aerobic electron transport chain
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4149_Mixed,_incl._Phospholipid_metabolism,_and_Aerobic_electron_transport_chain


id: CL:4150
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4150_Mixed,_incl._Phospholipid_metabolism,_and_Phosphotransferase_activity,_for_other_substituted_phosphate_groups

description:
  Mixed, incl. Phospholipid metabolism, and Phosphotransferase activity, for other substituted phosphate groups


id: CL:4152
description: Phospholipid metabolism, and CDP-alcohol phosphatidyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4152_Phospholipid_metabolism,_and_CDP-alcohol_phosphatidyltransferase


id: CL:416
description: Mixed, incl. RNA pseudouridylate synthase, and GTP binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:416_Mixed,_incl._RNA_pseudouridylate_synthase,_and_GTP_binding_domain


id: CL:417
description: Mixed, incl. RNA pseudouridylate synthase, and 50S ribosomal protein L30e-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:417_Mixed,_incl._RNA_pseudouridylate_synthase,_and_50S_ribosomal_protein_L30e-like


id: CL:4170
description: Mixed, incl. CAAX-box protein maturation, and Exonuclease, RNase T/DNA polymerase III
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4170_Mixed,_incl._CAAX-box_protein_maturation,_and_Exonuclease,_RNase_T/DNA_polymerase_III


id: CL:4179
description: Mixed, incl. Aerobic electron transport chain, and Non-homologous end-joining
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4179_Mixed,_incl._Aerobic_electron_transport_chain,_and_Non-homologous_end-joining


id: CL:4181
description: Mixed, incl. Cardiolipin synthase B, and Peptidase S9, prolyl oligopeptidase, catalytic domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4181_Mixed,_incl._Cardiolipin_synthase_B,_and_Peptidase_S9,_prolyl_oligopeptidase,_catalytic_domain


id: CL:4197
description: Aerobic electron transport chain
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4197_Aerobic_electron_transport_chain


id: CL:420
description: Pseudouridine synthase, RluC/RluD, and 50S ribosomal protein L30e-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:420_Pseudouridine_synthase,_RluC/RluD,_and_50S_ribosomal_protein_L30e-like


id: CL:4212
description: Mixed, incl. Short-chain dehydrogenase/reductase, conserved site, and Sulfur metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4212_Mixed,_incl._Short-chain_dehydrogenase/reductase,_conserved_site,_and_Sulfur_metabolism


id: CL:4228
description: Mixed, incl. Peptidyl-prolyl cis-trans isomerase, PpiC-type, and EamA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4228_Mixed,_incl._Peptidyl-prolyl_cis-trans_isomerase,_PpiC-type,_and_EamA_domain


id: CL:4229
description: Mixed, incl. Peptidyl-prolyl cis-trans isomerase, PpiC-type, and EamA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4229_Mixed,_incl._Peptidyl-prolyl_cis-trans_isomerase,_PpiC-type,_and_EamA_domain


id: CL:4231
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4231_Mixed,_incl._Peptidyl-prolyl_cis-trans_isomerase,_PpiC-type,_and_Phospholipase/carboxylesterase/thioesterase

description:
  Mixed, incl. Peptidyl-prolyl cis-trans isomerase, PpiC-type, and Phospholipase/carboxylesterase/thioesterase


id: CL:4245
description: SNARE associated Golgi protein, and EamA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4245_SNARE_associated_Golgi_protein,_and_EamA_domain


id: CL:4254
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4254_Mixed,_incl._Monosaccharide_binding,_and_Hedgehog_signalling/DD-peptidase_zinc-binding_domain_superfamily

description:
  Mixed, incl. Monosaccharide binding, and Hedgehog signalling/DD-peptidase zinc-binding domain superfamily


id: CL:4263
description: Mixed, incl. AsnC-type HTH domain, and C-type lectin fold
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4263_Mixed,_incl._AsnC-type_HTH_domain,_and_C-type_lectin_fold


id: CL:4276
description: Mostly uncharacterized, incl. Acyl-CoA N-acyltransferase, and Ceramide metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4276_Mostly_uncharacterized,_incl._Acyl-CoA_N-acyltransferase,_and_Ceramide_metabolic_process


id: CL:4277
description: Mixed, incl. Zinc chaperone CobW-like, C-terminal, and Nitrogen metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4277_Mixed,_incl._Zinc_chaperone_CobW-like,_C-terminal,_and_Nitrogen_metabolism


id: CL:4280
description: Mixed, incl. ABC 3 transport family, and Ferric-uptake regulator
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4280_Mixed,_incl._ABC_3_transport_family,_and_Ferric-uptake_regulator


id: CL:4299
description: Mixed, incl. Aquaporin-like, and Putative RNA methylase family UPF0020
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4299_Mixed,_incl._Aquaporin-like,_and_Putative_RNA_methylase_family_UPF0020


id: CL:4311
description: Leucyltransferase activity, and NUDIX hydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4311_Leucyltransferase_activity,_and_NUDIX_hydrolase


id: CL:4328
description: Mixed, incl. Transporter activity, and PepSY-associated TM protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4328_Mixed,_incl._Transporter_activity,_and_PepSY-associated_TM_protein


id: CL:4329
description: Mixed, incl. Transporter activity, and PepSY-associated TM protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4329_Mixed,_incl._Transporter_activity,_and_PepSY-associated_TM_protein


id: CL:4330
description: Mostly uncharacterized, incl. TonB-dependent Receptor Plug Domain, and Phospholipid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4330_Mostly_uncharacterized,_incl._TonB-dependent_Receptor_Plug_Domain,_and_Phospholipid_transport


id: CL:4331
description: Mixed, incl. TonB-dependent Receptor Plug Domain, and PepSY-associated TM protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4331_Mixed,_incl._TonB-dependent_Receptor_Plug_Domain,_and_PepSY-associated_TM_protein


id: CL:4332
description: Mixed, incl. Siderophore uptake transmembrane transporter activity, and PepSY-associated TM protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4332_Mixed,_incl._Siderophore_uptake_transmembrane_transporter_activity,_and_PepSY-associated_TM_protein


id: CL:4334
description: Mixed, incl. Siderophore uptake transmembrane transporter activity, and PepSY-associated TM protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4334_Mixed,_incl._Siderophore_uptake_transmembrane_transporter_activity,_and_PepSY-associated_TM_protein


id: CL:4335
description: Mixed, incl. Siderophore uptake transmembrane transporter activity, and PepSY-associated TM protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4335_Mixed,_incl._Siderophore_uptake_transmembrane_transporter_activity,_and_PepSY-associated_TM_protein


id: CL:4337
description: Siderophore uptake transmembrane transporter activity, and Domain of unknown function (DUF4880)
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4337_Siderophore_uptake_transmembrane_transporter_activity,_and_Domain_of_unknown_function_(DUF4880)


id: CL:4340
description: Mixed, incl. Domain of unknown function (DUF4880), and Secretin and TonB N terminus short domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4340_Mixed,_incl._Domain_of_unknown_function_(DUF4880),_and_Secretin_and_TonB_N_terminus_short_domain


id: CL:4342
description: FecR, N-terminal, and RNA polymerase sigma-70 like
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4342_FecR,_N-terminal,_and_RNA_polymerase_sigma-70_like


id: CL:4371
description: TonB-dependent siderophore receptor, and Monosaccharide binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4371_TonB-dependent_siderophore_receptor,_and_Monosaccharide_binding


id: CL:4391
description: Mixed, incl. ApbE-like superfamily, and Glucan catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4391_Mixed,_incl._ApbE-like_superfamily,_and_Glucan_catabolic_process


id: CL:441
description: Mixed, incl. AAA domain, and RNA (guanine-N7)-methylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:441_Mixed,_incl._AAA_domain,_and_RNA_(guanine-N7)-methylation


id: CL:4413
description: Mixed, incl. Cell killing, and Methyltransferase small domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4413_Mixed,_incl._Cell_killing,_and_Methyltransferase_small_domain


id: CL:4433
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4433_Mixed,_incl._Biosynthesis_of_siderophore_group_nonribosomal_peptides,_and_Periplasmic_binding_protein

description:
  Mixed, incl. Biosynthesis of siderophore group nonribosomal peptides, and Periplasmic binding protein


id: CL:4434
description: Mixed, incl. Biosynthesis of siderophore group nonribosomal peptides, and Esterase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4434_Mixed,_incl._Biosynthesis_of_siderophore_group_nonribosomal_peptides,_and_Esterase-like


id: CL:4451
description: Mixed, incl. ABC 3 transport family, and Periplasmic binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4451_Mixed,_incl._ABC_3_transport_family,_and_Periplasmic_binding_protein


id: CL:4464
description: Mixed, incl. Phospholipid transport, and Outer membrane efflux protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4464_Mixed,_incl._Phospholipid_transport,_and_Outer_membrane_efflux_protein


id: CL:4465
description: Mixed, incl. Outer membrane efflux protein, and Biotin-lipoyl like
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4465_Mixed,_incl._Outer_membrane_efflux_protein,_and_Biotin-lipoyl_like


id: CL:4467
description: Acriflavin resistance protein, and Outer membrane efflux protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4467_Acriflavin_resistance_protein,_and_Outer_membrane_efflux_protein


id: CL:4469
description: Mixed, incl. Outer membrane efflux protein, and RND efflux pump, membrane fusion protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4469_Mixed,_incl._Outer_membrane_efflux_protein,_and_RND_efflux_pump,_membrane_fusion_protein


id: CL:4470
description: Mixed, incl. Biotin-lipoyl like, and Sterol-sensing domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4470_Mixed,_incl._Biotin-lipoyl_like,_and_Sterol-sensing_domain


id: CL:4481
description: RND efflux pump, membrane fusion protein, and MMPL family
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4481_RND_efflux_pump,_membrane_fusion_protein,_and_MMPL_family


id: CL:4512
description: ABC-2 family transporter protein, and Membrane fusion protein, biotin-lipoyl like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4512_ABC-2_family_transporter_protein,_and_Membrane_fusion_protein,_biotin-lipoyl_like_domain


id: CL:4524
description: Phospholipid transport, and BolA protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4524_Phospholipid_transport,_and_BolA_protein


id: CL:4541
description: Phospholipid transport, and Nitroreductase
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4541_Phospholipid_transport,_and_Nitroreductase


id: CL:455
description: Mixed, incl. Cellular macromolecule catabolic process, and NUDIX domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:455_Mixed,_incl._Cellular_macromolecule_catabolic_process,_and_NUDIX_domain


id: CL:4551
description: Mostly uncharacterized, incl. Ferritin-like superfamily, and Imelysin
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4551_Mostly_uncharacterized,_incl._Ferritin-like_superfamily,_and_Imelysin


id: CL:4553
description: Mostly uncharacterized, incl. Ferritin-like superfamily, and Imelysin
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4553_Mostly_uncharacterized,_incl._Ferritin-like_superfamily,_and_Imelysin


id: CL:4554
description: Mixed, incl. Ferritin-like superfamily, and CsbD-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4554_Mixed,_incl._Ferritin-like_superfamily,_and_CsbD-like


id: CL:4556
description: Mixed, incl. Ferritin-like diiron domain, and CsbD-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4556_Mixed,_incl._Ferritin-like_diiron_domain,_and_CsbD-like


id: CL:4558
description: Mixed, incl. CsbD-like, and Phospholipid binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4558_Mixed,_incl._CsbD-like,_and_Phospholipid_binding


id: CL:456
description: Mixed, incl. RNA helicase activity, and NUDIX domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:456_Mixed,_incl._RNA_helicase_activity,_and_NUDIX_domain


id: CL:4570
description: Ferritin-like diiron domain, and Photosynthesis, light reaction
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4570_Ferritin-like_diiron_domain,_and_Photosynthesis,_light_reaction


id: CL:458
description: RNA helicase activity, and NUDIX domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:458_RNA_helicase_activity,_and_NUDIX_domain


id: CL:4584
description: Mixed, incl. AsmA, and MerR transcriptional regulator
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4584_Mixed,_incl._AsmA,_and_MerR_transcriptional_regulator


id: CL:4593
description: Mixed, incl. Imelysin, and Regulation of signaling
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4593_Mixed,_incl._Imelysin,_and_Regulation_of_signaling


id: CL:4594
description: Mixed, incl. Imelysin, and Quinoprotein amine dehydrogenase, beta chain-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4594_Mixed,_incl._Imelysin,_and_Quinoprotein_amine_dehydrogenase,_beta_chain-like


id: CL:4605
description: Regulation of signaling, and Organic anion transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4605_Regulation_of_signaling,_and_Organic_anion_transmembrane_transporter_activity


id: CL:4622
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4622_Mixed,_incl._Latent_infection_-_Other_responses_of_Mtb_to_phagocytosis,_and_Heavy-metal-associated_domain

description:
  Mixed, incl. Latent infection - Other responses of Mtb to phagocytosis, and Heavy-metal-associated domain


id: CL:4623
description: Latent infection - Other responses of Mtb to phagocytosis, and Amide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4623_Latent_infection_-_Other_responses_of_Mtb_to_phagocytosis,_and_Amide_transport


id: CL:4625
description: Mixed, incl. Amide transport, and ABC transporter type 1, GsiC-like, N-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4625_Mixed,_incl._Amide_transport,_and_ABC_transporter_type_1,_GsiC-like,_N-terminal_domain


id: CL:4626
description: Mixed, incl. Amide transport, and ABC transporter type 1, GsiC-like, N-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4626_Mixed,_incl._Amide_transport,_and_ABC_transporter_type_1,_GsiC-like,_N-terminal_domain


id: CL:4628
description: Amide transport, and Peptide/nickel binding protein, MppA-type
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4628_Amide_transport,_and_Peptide/nickel_binding_protein,_MppA-type


id: CL:4652
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4652_Mixed,_incl._Solute-binding_protein_family_5,_and_Oligopeptide/dipeptide_transporter,_C-terminal_region

description:
  Mixed, incl. Solute-binding protein family 5, and Oligopeptide/dipeptide transporter, C-terminal region


id: CL:4664
description: Type 1 protein exporter, and cob(I)yrinic acid a,c-diamide adenosyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4664_Type_1_protein_exporter,_and_cob(I)yrinic_acid_a,c-diamide_adenosyltransferase_activity


id: CL:4680
description: Mixed, incl. Heavy-metal-associated domain, and Response to inorganic substance
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4680_Mixed,_incl._Heavy-metal-associated_domain,_and_Response_to_inorganic_substance


id: CL:4682
description: Mixed, incl. Heavy-metal-associated domain, and Response to mercury ion
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4682_Mixed,_incl._Heavy-metal-associated_domain,_and_Response_to_mercury_ion


id: CL:4684
description: Heavy-metal-associated domain, and Response to mercury ion
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4684_Heavy-metal-associated_domain,_and_Response_to_mercury_ion


id: CL:4706
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4706_Mixed,_incl._Protein_of_unknown_function_DUF4198,_and_Transition_metal_ion_transmembrane_transporter_activity

description:
  Mixed, incl. Protein of unknown function DUF4198, and Transition metal ion transmembrane transporter activity


id: CL:4721
description: Mostly uncharacterized, incl. Cell aggregation, and Proteinase inhibitor I78
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4721_Mostly_uncharacterized,_incl._Cell_aggregation,_and_Proteinase_inhibitor_I78


id: CL:4722
description: Mixed, incl. Cell aggregation, and Virulence factor BrkB
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4722_Mixed,_incl._Cell_aggregation,_and_Virulence_factor_BrkB


id: CL:4724
description: Mixed, incl. Cell aggregation, and Tetratricopeptide repeats
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4724_Mixed,_incl._Cell_aggregation,_and_Tetratricopeptide_repeats


id: CL:4740
description: Mixed, incl. Virulence factor BrkB, and ATP-dependent helicase, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4740_Mixed,_incl._Virulence_factor_BrkB,_and_ATP-dependent_helicase,_C-terminal


id: CL:475
description: Ankyrin repeats, and Calcineurin-like phosphoesterase
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:475_Ankyrin_repeats,_and_Calcineurin-like_phosphoesterase


id: CL:4753
description: Mixed, incl. Proteinase inhibitor I78, and HI0933-like protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4753_Mixed,_incl._Proteinase_inhibitor_I78,_and_HI0933-like_protein


id: CL:4754
description: Mixed, incl. HI0933-like protein, and Stomatin/HflK family
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4754_Mixed,_incl._HI0933-like_protein,_and_Stomatin/HflK_family


id: CL:4769
description: Proteinase inhibitor I78, and Outer membrane protein/outer membrane enzyme PagP, beta-barrel
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4769_Proteinase_inhibitor_I78,_and_Outer_membrane_protein/outer_membrane_enzyme_PagP,_beta-barrel


id: CL:4782
description: Mixed, incl. Sulfur metabolism, and Degradation of aromatic compounds
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4782_Mixed,_incl._Sulfur_metabolism,_and_Degradation_of_aromatic_compounds


id: CL:4784
description: Mixed, incl. Sulfur metabolism, and Anion transmembrane transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4784_Mixed,_incl._Sulfur_metabolism,_and_Anion_transmembrane_transport


id: CL:4786
description: Sulfur metabolism, and Anion transmembrane transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4786_Sulfur_metabolism,_and_Anion_transmembrane_transport


id: CL:4787
description: Sulfur metabolism, and Anion transmembrane transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4787_Sulfur_metabolism,_and_Anion_transmembrane_transport


id: CL:4788
description: Sulfur metabolism, and Anion transmembrane transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4788_Sulfur_metabolism,_and_Anion_transmembrane_transport


id: CL:4789
description: Sulfur metabolism, and Anion transmembrane transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4789_Sulfur_metabolism,_and_Anion_transmembrane_transport


id: CL:4790
description: Sulfur metabolism, and Anion transmembrane transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4790_Sulfur_metabolism,_and_Anion_transmembrane_transport


id: CL:4792
description: Sulfur metabolism, and Anion transmembrane transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4792_Sulfur_metabolism,_and_Anion_transmembrane_transport


id: CL:4793
description: Mixed, incl. SsuA/THI5-like, and MetI-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4793_Mixed,_incl._SsuA/THI5-like,_and_MetI-like_superfamily


id: CL:4795
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4795_Mixed,_incl._Nitrate/bicarbonate_ABC_transporter_substrate-binding_domain,_and_MetI-like_superfamily

description:
  Mixed, incl. Nitrate/bicarbonate ABC transporter substrate-binding domain, and MetI-like superfamily


id: CL:4816
description: SsuA/THI5-like, and Anion transmembrane transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4816_SsuA/THI5-like,_and_Anion_transmembrane_transport


id: CL:4836
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4836_Mixed,_incl._glycerol-3-phosphate_catabolic_process,_and_Alkanesulfonate_transmembrane_transporter_activity

description:
  Mixed, incl. glycerol-3-phosphate catabolic process, and Alkanesulfonate transmembrane transporter activity


id: CL:4853
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4853_Mixed,_incl._Alkanesulfonate_transmembrane_transporter_activity,_and_Taurine_catabolism_dioxygenase_TauD,_TfdA_family

description:
  Mixed, incl. Alkanesulfonate transmembrane transporter activity, and Taurine catabolism dioxygenase TauD, TfdA family


id: CL:4863
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4863_Mixed,_incl._Alkylhydroperoxidase_AhpD_core,_and_Nitrate/bicarbonate_ABC_transporter_substrate-binding_domain

description:
  Mixed, incl. Alkylhydroperoxidase AhpD core, and Nitrate/bicarbonate ABC transporter substrate-binding domain


id: CL:4872
description: Mixed, incl. Helix-turn-helix domain, and Ether hydrolase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4872_Mixed,_incl._Helix-turn-helix_domain,_and_Ether_hydrolase_activity


id: CL:4883
description: Luciferase-like domain, and NADPH-dependent FMN reductase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4883_Luciferase-like_domain,_and_NADPH-dependent_FMN_reductase-like


id: CL:4899
description: Mixed, incl. DapA-like, and GNAT domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4899_Mixed,_incl._DapA-like,_and_GNAT_domain


id: CL:491
description: Histone modification, and DHHA1 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:491_Histone_modification,_and_DHHA1_domain


id: CL:4914
description: Mixed, incl. Glyoxalase/fosfomycin resistance/dioxygenase domain, and Recombinase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4914_Mixed,_incl._Glyoxalase/fosfomycin_resistance/dioxygenase_domain,_and_Recombinase-like


id: CL:4916
description: Mixed, incl. Glyoxalase/fosfomycin resistance/dioxygenase domain, and Recombinase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4916_Mixed,_incl._Glyoxalase/fosfomycin_resistance/dioxygenase_domain,_and_Recombinase-like


id: CL:4918
description: Mostly uncharacterized, incl. Aspartate dehydrogenase, and NMT1/THI5 family
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4918_Mostly_uncharacterized,_incl._Aspartate_dehydrogenase,_and_NMT1/THI5_family


id: CL:4923
description: Mixed, incl. Aspartate dehydrogenase, and Acetolactate synthase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4923_Mixed,_incl._Aspartate_dehydrogenase,_and_Acetolactate_synthase_complex


id: CL:4962
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4962_Mixed,_incl._3-hydroxyisobutyrate_dehydrogenase-like,_NAD-binding_domain,_and_Dimeric_alpha-beta_barrel

description:
  Mixed, incl. 3-hydroxyisobutyrate dehydrogenase-like, NAD-binding domain, and Dimeric alpha-beta barrel


id: CL:4976
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4976_Mixed,_incl._Organic_hydroxy_compound_catabolic_process,_and_Polycyclic_aromatic_hydrocarbon_degradation

description:
  Mixed, incl. Organic hydroxy compound catabolic process, and Polycyclic aromatic hydrocarbon degradation


id: CL:4977
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4977_Mixed,_incl._Organic_hydroxy_compound_catabolic_process,_and_Chlorocyclohexane_and_chlorobenzene_degradation

description:
  Mixed, incl. Organic hydroxy compound catabolic process, and Chlorocyclohexane and chlorobenzene degradation


id: CL:4978
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4978_Mixed,_incl._3-(3-hydroxy)phenylpropionate_metabolic_process,_and_Chlorocyclohexane_and_chlorobenzene_degradation

description:
  Mixed, incl. 3-(3-hydroxy)phenylpropionate metabolic process, and Chlorocyclohexane and chlorobenzene degradation


id: CL:4979
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4979_Mixed,_incl._3-(3-hydroxy)phenylpropionate_metabolic_process,_and_Chlorocyclohexane_and_chlorobenzene_degradation

description:
  Mixed, incl. 3-(3-hydroxy)phenylpropionate metabolic process, and Chlorocyclohexane and chlorobenzene degradation


id: CL:4981
description: Mixed, incl. 3-(3-hydroxy)phenylpropionate metabolic process, and Toluene degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4981_Mixed,_incl._3-(3-hydroxy)phenylpropionate_metabolic_process,_and_Toluene_degradation


id: CL:4984
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4984_Mixed,_incl._3-(3-hydroxy)phenylpropionate_metabolic_process,_and_Chlorocyclohexane_and_chlorobenzene_degradation

description:
  Mixed, incl. 3-(3-hydroxy)phenylpropionate metabolic process, and Chlorocyclohexane and chlorobenzene degradation


id: CL:4985
description: Mixed, incl. Chlorocyclohexane and chlorobenzene degradation, and SnoaL-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4985_Mixed,_incl._Chlorocyclohexane_and_chlorobenzene_degradation,_and_SnoaL-like_domain


id: CL:4987
description: Mixed, incl. SnoaL-like domain, and Catechol dioxygenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:4987_Mixed,_incl._SnoaL-like_domain,_and_Catechol_dioxygenase_activity


id: CL:500
description: Mixed, incl. Protein processing, and GTP binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:500_Mixed,_incl._Protein_processing,_and_GTP_binding_domain


id: CL:5004
description: 3-(3-hydroxy)phenylpropionate metabolic process, and 3-hydroxybenzoate 6-monooxygenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5004_3-(3-hydroxy)phenylpropionate_metabolic_process,_and_3-hydroxybenzoate_6-monooxygenase_activity


id: CL:503
description: Mixed, incl. Peptidase S1C, and Peptidase S24-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:503_Mixed,_incl._Peptidase_S1C,_and_Peptidase_S24-like


id: CL:5035
description: Mixed, incl. Hydrocarbon metabolic process, and Catechol dioxygenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5035_Mixed,_incl._Hydrocarbon_metabolic_process,_and_Catechol_dioxygenase_activity


id: CL:5047
description: Mixed, incl. Zinc-binding dehydrogenase, and RutC-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5047_Mixed,_incl._Zinc-binding_dehydrogenase,_and_RutC-like_superfamily


id: CL:5048
description: Mixed, incl. DJ-1/PfpI family, and N-terminal half of MaoC dehydratase
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5048_Mixed,_incl._DJ-1/PfpI_family,_and_N-terminal_half_of_MaoC_dehydratase


id: CL:5063
description: Zinc-binding dehydrogenase, and RutC-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5063_Zinc-binding_dehydrogenase,_and_RutC-like_superfamily


id: CL:5072
description: Mixed, incl. Polycyclic aromatic hydrocarbon degradation, and Class II aldolase/adducin N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5072_Mixed,_incl._Polycyclic_aromatic_hydrocarbon_degradation,_and_Class_II_aldolase/adducin_N-terminal


id: CL:5074
description: Mixed, incl. Polycyclic aromatic hydrocarbon degradation, and Class II aldolase/adducin N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5074_Mixed,_incl._Polycyclic_aromatic_hydrocarbon_degradation,_and_Class_II_aldolase/adducin_N-terminal


id: CL:5076
description: Mixed, incl. Polycyclic aromatic hydrocarbon degradation, and Class II aldolase/adducin N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5076_Mixed,_incl._Polycyclic_aromatic_hydrocarbon_degradation,_and_Class_II_aldolase/adducin_N-terminal


id: CL:5079
description: Polycyclic aromatic hydrocarbon degradation, and Inositol catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5079_Polycyclic_aromatic_hydrocarbon_degradation,_and_Inositol_catabolic_process


id: CL:5080
description: Polycyclic aromatic hydrocarbon degradation, and Class II aldolase/adducin N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5080_Polycyclic_aromatic_hydrocarbon_degradation,_and_Class_II_aldolase/adducin_N-terminal


id: CL:5089
description: LigXa-like, C-terminal domain, and Inositol catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5089_LigXa-like,_C-terminal_domain,_and_Inositol_catabolic_process


id: CL:5114
description: 3-hydroxyisobutyrate dehydrogenase-related, and Organic cation transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5114_3-hydroxyisobutyrate_dehydrogenase-related,_and_Organic_cation_transport


id: CL:5137
description: Mixed, incl. Histidine catabolic process, and Endoribonuclease L-PSP
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5137_Mixed,_incl._Histidine_catabolic_process,_and_Endoribonuclease_L-PSP


id: CL:5138
description: Mixed, incl. Endoribonuclease L-PSP, and Amidohydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5138_Mixed,_incl._Endoribonuclease_L-PSP,_and_Amidohydrolase


id: CL:5139
description: Mixed, incl. Amidohydrolase, and Endoribonuclease L-PSP
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5139_Mixed,_incl._Amidohydrolase,_and_Endoribonuclease_L-PSP


id: CL:5140
description: Mixed, incl. Endoribonuclease L-PSP, and Metallopeptidase, catalytic domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5140_Mixed,_incl._Endoribonuclease_L-PSP,_and_Metallopeptidase,_catalytic_domain_superfamily


id: CL:5141
description: Endoribonuclease L-PSP, and Metallopeptidase, catalytic domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5141_Endoribonuclease_L-PSP,_and_Metallopeptidase,_catalytic_domain_superfamily


id: CL:5152
description: Mixed, incl. Nitroreductase family, and Oxidoreductase FAD-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5152_Mixed,_incl._Nitroreductase_family,_and_Oxidoreductase_FAD-binding_domain


id: CL:5162
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5162_3-hydroxyanthranilate_3,4-dioxygenase_activity,_and_2-amino-3-carboxymuconate-6-semialdehyde_decarboxylase

description:
  3-hydroxyanthranilate 3,4-dioxygenase activity, and 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase


id: CL:5180
description: Flavin reductase like domain, and 4-hydroxyphenylacetate 3-hydroxylase N terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5180_Flavin_reductase_like_domain,_and_4-hydroxyphenylacetate_3-hydroxylase_N_terminal


id: CL:5192
description: Histidine metabolism, and UbiC transcription regulator-associated
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5192_Histidine_metabolism,_and_UbiC_transcription_regulator-associated


id: CL:520
description: Mixed, incl. CAAX-box protein maturation, and Zinc finger, FPG/IleRS-type
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:520_Mixed,_incl._CAAX-box_protein_maturation,_and_Zinc_finger,_FPG/IleRS-type


id: CL:5214
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5214_Mixed,_incl._Bacterial_extracellular_solute-binding_protein,_family_7,_and_Tripartite_ATP-independent_periplasmic_transporters,_DctQ_component

description:
  Mixed, incl. Bacterial extracellular solute-binding protein, family 7, and Tripartite ATP-independent periplasmic transporters, DctQ component


id: CL:5215
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5215_Mixed,_incl._Bacterial_extracellular_solute-binding_protein,_family_7,_and_Tripartite_ATP-independent_periplasmic_transporters,_DctQ_component

description:
  Mixed, incl. Bacterial extracellular solute-binding protein, family 7, and Tripartite ATP-independent periplasmic transporters, DctQ component


id: CL:5216
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5216_Mixed,_incl._Bacterial_extracellular_solute-binding_protein,_family_7,_and_Tripartite_ATP-independent_periplasmic_transporters,_DctQ_component

description:
  Mixed, incl. Bacterial extracellular solute-binding protein, family 7, and Tripartite ATP-independent periplasmic transporters, DctQ component


id: CL:5217
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5217_Mixed,_incl._Bacterial_extracellular_solute-binding_protein,_family_7,_and_Tripartite_ATP-independent_periplasmic_transporters,_DctQ_component

description:
[cell repeats an earlier one in this file: 142 characters]


id: CL:5218
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5218_Mixed,_incl._Bacterial_extracellular_solute-binding_protein,_family_7,_and_Tripartite_ATP-independent_periplasmic_transporters,_DctQ_component

description:
[cell repeats an earlier one in this file: 142 characters]


id: CL:5220
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5220_Bacterial_extracellular_solute-binding_protein,_family_7,_and_Tripartite_ATP-independent_periplasmic_transporter,_DctM_component

description:
  Bacterial extracellular solute-binding protein, family 7, and Tripartite ATP-independent periplasmic transporter, DctM component


id: CL:5222
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5222_Bacterial_extracellular_solute-binding_protein,_family_7,_and_Tripartite_ATP-independent_periplasmic_transporters,_DctQ_component

description:
  Bacterial extracellular solute-binding protein, family 7, and Tripartite ATP-independent periplasmic transporters, DctQ component


id: CL:5223
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5223_Tripartite_ATP-independent_periplasmic_transporters,_DctQ_component,_and_Tripartite_ATP-independent_periplasmic_transporter,_DctM_component

description:
  Tripartite ATP-independent periplasmic transporters, DctQ component, and Tripartite ATP-independent periplasmic transporter, DctM component


id: CL:5225
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5225_Tripartite_ATP-independent_periplasmic_transporters,_DctQ_component,_and_Tripartite_ATP-independent_periplasmic_transporter,_DctM_component

description:
  Tripartite ATP-independent periplasmic transporters, DctQ component, and Tripartite ATP-independent periplasmic transporter, DctM component


id: CL:5246
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5246_Bacterial_extracellular_solute-binding_protein,_family_7,_and_TRAP_transporter_large_membrane_protein_DctM

description:
  Bacterial extracellular solute-binding protein, family 7, and TRAP transporter large membrane protein DctM


id: CL:5278
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5278_Mixed,_incl._TRAP_transporter_solute_receptor_DctP,_and_TRAP_transporter_large_membrane_protein_DctM

description:
  Mixed, incl. TRAP transporter solute receptor DctP, and TRAP transporter large membrane protein DctM


id: CL:5288
description: Mixed, incl. TRAP transporter solute receptor DctP, and Alpha/beta hydrolase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5288_Mixed,_incl._TRAP_transporter_solute_receptor_DctP,_and_Alpha/beta_hydrolase_family


id: CL:529
description: Mixed, incl. Protein folding, and Cellular oxidant detoxification
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:529_Mixed,_incl._Protein_folding,_and_Cellular_oxidant_detoxification


id: CL:5299
description: Mixed, incl. Creatinase/Prolidase N-terminal domain, and Taurine and hypotaurine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5299_Mixed,_incl._Creatinase/Prolidase_N-terminal_domain,_and_Taurine_and_hypotaurine_metabolism


id: CL:530
description: Mixed, incl. Protein folding, and ATPase, AAA-type, core
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:530_Mixed,_incl._Protein_folding,_and_ATPase,_AAA-type,_core


id: CL:5311
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5311_Mixed,_incl._(2,3-dihydroxybenzoyl)adenylate_synthase_activity,_and_Cellular_carbohydrate_catabolic_process

description:
  Mixed, incl. (2,3-dihydroxybenzoyl)adenylate synthase activity, and Cellular carbohydrate catabolic process


id: CL:532
description: Protein folding, and ATPase, AAA-type, core
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:532_Protein_folding,_and_ATPase,_AAA-type,_core


id: CL:5325
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5325_Mostly_uncharacterized,_incl._Aspartate/other_aminotransferase,_and_Xylose_isomerase-like_TIM_barrel

description:
  Mostly uncharacterized, incl. Aspartate/other aminotransferase, and Xylose isomerase-like TIM barrel


id: CL:5327
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5327_Mixed,_incl._D-isomer_specific_2-hydroxyacid_dehydrogenase,_catalytic_domain,_and_Dimeric_alpha-beta_barrel

description:
  Mixed, incl. D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain, and Dimeric alpha-beta barrel


id: CL:534
description: Protein folding, and Peptidase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:534_Protein_folding,_and_Peptidase_complex


id: CL:5355
description: LysR substrate binding domain, and Ferrous iron binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5355_LysR_substrate_binding_domain,_and_Ferrous_iron_binding


id: CL:5356
description: LysR substrate binding domain, and Ferrous iron binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5356_LysR_substrate_binding_domain,_and_Ferrous_iron_binding


id: CL:536
description: Protein folding chaperone, and ClpA/B family
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:536_Protein_folding_chaperone,_and_ClpA/B_family


id: CL:5435
description: Mixed, incl. Ferrous iron binding, and Phenol-containing compound metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5435_Mixed,_incl._Ferrous_iron_binding,_and_Phenol-containing_compound_metabolic_process


id: CL:5437
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5437_Mixed,_incl._Phenol-containing_compound_metabolic_process,_and_Dioxygenase_LigAB,_LigA_subunit_superfamily

description:
  Mixed, incl. Phenol-containing compound metabolic process, and Dioxygenase LigAB, LigA subunit superfamily


id: CL:5441
description: Mixed, incl. Lignin catabolic process, and Dioxygenase LigAB, LigA subunit superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5441_Mixed,_incl._Lignin_catabolic_process,_and_Dioxygenase_LigAB,_LigA_subunit_superfamily


id: CL:5443
description: Lignin catabolic process, and Inositol catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5443_Lignin_catabolic_process,_and_Inositol_catabolic_process


id: CL:5455
description: Phenol-containing compound metabolic process, and 3-hydroxyisobutyrate dehydrogenase-related
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5455_Phenol-containing_compound_metabolic_process,_and_3-hydroxyisobutyrate_dehydrogenase-related


id: CL:5479
description: Mixed, incl. Calmodulin binding, and Alpha/beta hydrolase fold-3
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5479_Mixed,_incl._Calmodulin_binding,_and_Alpha/beta_hydrolase_fold-3


id: CL:5494
description: Corrinoid adenosyltransferase PduO/GlcC-like, and LysR substrate binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5494_Corrinoid_adenosyltransferase_PduO/GlcC-like,_and_LysR_substrate_binding_domain


id: CL:5506
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5506_Mixed,_incl._Helix_turn_helix_gluconate_operon_transcriptional_repressor,_and_Bacterial_transcriptional_regulator

description:
  Mixed, incl. Helix_turn_helix gluconate operon transcriptional repressor, and Bacterial transcriptional regulator


id: CL:5507
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5507_Mixed,_incl._Helix_turn_helix_gluconate_operon_transcriptional_repressor,_and_Bacterial_transcriptional_regulator

description:
  Mixed, incl. Helix_turn_helix gluconate operon transcriptional repressor, and Bacterial transcriptional regulator


id: CL:5508
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5508_Mixed,_incl._Helix_turn_helix_gluconate_operon_transcriptional_repressor,_and_Bacterial_transcriptional_regulator

description:
  Mixed, incl. Helix_turn_helix gluconate operon transcriptional repressor, and Bacterial transcriptional regulator


id: CL:5509
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5509_Helix_turn_helix_gluconate_operon_transcriptional_repressor,_and_Bacterial_transcriptional_regulator

description:
  Helix_turn_helix gluconate operon transcriptional repressor, and Bacterial transcriptional regulator


id: CL:5511
description: Bacterial transcriptional regulator, and PhnB-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5511_Bacterial_transcriptional_regulator,_and_PhnB-like


id: CL:5512
description: Bacterial transcriptional regulator
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5512_Bacterial_transcriptional_regulator


id: CL:5514
description: Transcription regulator IclR, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5514_Transcription_regulator_IclR,_C-terminal


id: CL:5538
description: Mixed, incl. IclR helix-turn-helix domain, and 2-oxopent-4-enoate hydratase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5538_Mixed,_incl._IclR_helix-turn-helix_domain,_and_2-oxopent-4-enoate_hydratase_activity


id: CL:5556
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5556_This_entry_represents_the_C-terminal_ligand_binding_domain_of_many_members_of_the_GntR_family._This_domain_probably_binds_to_a_range_of_effector_molecules_that_regulate_the_transcription_of_genes_through_the_action_of_the_N-terminal_DNA-binding_...

description:
  This entry represents the C-terminal ligand binding domain of many members of the GntR family. This domain probably binds to a range of effector molecules that regulate the transcription of genes through the action of the N-terminal DNA-binding ...


id: CL:5559
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5559_This_entry_represents_the_C-terminal_ligand_binding_domain_of_many_members_of_the_GntR_family._This_domain_probably_binds_to_a_range_of_effector_molecules_that_regulate_the_transcription_of_genes_through_the_action_of_the_N-terminal_DNA-binding_...

description:
  This entry represents the C-terminal ligand binding domain of many members of the GntR family. This domain probably binds to a range of effector molecules that regulate the transcription of genes through the action of the N-terminal DNA-binding ...


id: CL:5562
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5562_This_entry_represents_the_C-terminal_ligand_binding_domain_of_many_members_of_the_GntR_family._This_domain_probably_binds_to_a_range_of_effector_molecules_that_regulate_the_transcription_of_genes_through_the_action_of_the_N-terminal_DNA-binding_...

description:
  This entry represents the C-terminal ligand binding domain of many members of the GntR family. This domain probably binds to a range of effector molecules that regulate the transcription of genes through the action of the N-terminal DNA-binding ...


id: CL:5598
description: Major facilitator superfamily, and Response to oxygen-containing compound
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5598_Major_facilitator_superfamily,_and_Response_to_oxygen-containing_compound


id: CL:5613
description: Mixed, incl. Saro_0823-like superfamily, and ABC-type transport auxiliary lipoprotein component
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5613_Mixed,_incl._Saro_0823-like_superfamily,_and_ABC-type_transport_auxiliary_lipoprotein_component


id: CL:5622
description: Major Facilitator Superfamily, and Sugar (and other) transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5622_Major_Facilitator_Superfamily,_and_Sugar_(and_other)_transporter


id: CL:5624
description: Mixed, incl. Xenobiotic export from cell, and Sulfite exporter TauE/SafE
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5624_Mixed,_incl._Xenobiotic_export_from_cell,_and_Sulfite_exporter_TauE/SafE


id: CL:564
description: ATPase, AAA-type, core, and Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:564_ATPase,_AAA-type,_core,_and_Ribosomal_protein_L7/L12,_C-terminal/adaptor_protein_ClpS-like


id: CL:5643
description: Mixed, incl. Major facilitator, sugar transporter-like, and Cellular response to pH
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5643_Mixed,_incl._Major_facilitator,_sugar_transporter-like,_and_Cellular_response_to_pH


id: CL:5661
description: Mixed, incl. Peptidase S33, and Subtilase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5661_Mixed,_incl._Peptidase_S33,_and_Subtilase_family


id: CL:5686
description: Amino acid transport, and Branched-chain amino acid transport system / permease component
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5686_Amino_acid_transport,_and_Branched-chain_amino_acid_transport_system_/_permease_component


id: CL:5687
description: Amino acid transport, and Branched-chain amino acid transport system / permease component
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5687_Amino_acid_transport,_and_Branched-chain_amino_acid_transport_system_/_permease_component


id: CL:5688
description: Amino acid transport, and Branched-chain amino acid transport system / permease component
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5688_Amino_acid_transport,_and_Branched-chain_amino_acid_transport_system_/_permease_component


id: CL:5689
description: Amino acid transport, and Branched-chain amino acid transport system / permease component
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5689_Amino_acid_transport,_and_Branched-chain_amino_acid_transport_system_/_permease_component


id: CL:5690
description: Amino acid transport, and Branched-chain amino acid transport system / permease component
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5690_Amino_acid_transport,_and_Branched-chain_amino_acid_transport_system_/_permease_component


id: CL:5691
description: Amino acid transport, and Branched-chain amino acid transport system / permease component
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5691_Amino_acid_transport,_and_Branched-chain_amino_acid_transport_system_/_permease_component


id: CL:5692
description: Mixed, incl. Branched-chain amino acid transport, and Leu/Ile/Val-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5692_Mixed,_incl._Branched-chain_amino_acid_transport,_and_Leu/Ile/Val-binding_protein


id: CL:5693
description: Mixed, incl. Branched-chain amino acid transport, and Leu/Ile/Val-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5693_Mixed,_incl._Branched-chain_amino_acid_transport,_and_Leu/Ile/Val-binding_protein


id: CL:5694
description: Mixed, incl. Branched-chain amino acid transport, and Leu/Ile/Val-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5694_Mixed,_incl._Branched-chain_amino_acid_transport,_and_Leu/Ile/Val-binding_protein


id: CL:5695
description: Mixed, incl. Branched-chain amino acid transport, and Leu/Ile/Val-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5695_Mixed,_incl._Branched-chain_amino_acid_transport,_and_Leu/Ile/Val-binding_protein


id: CL:5696
description: Mixed, incl. Branched-chain amino acid transport, and Leu/Ile/Val-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5696_Mixed,_incl._Branched-chain_amino_acid_transport,_and_Leu/Ile/Val-binding_protein


id: CL:5698
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5698_Mixed,_incl._Branched-chain_amino_acid_transport_system_/_permease_component,_and_Leu/Ile/Val-binding_protein

description:
  Mixed, incl. Branched-chain amino acid transport system / permease component, and Leu/Ile/Val-binding protein


id: CL:5699
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5699_Mixed,_incl._Branched-chain_amino_acid_transport_system_/_permease_component,_and_Leu/Ile/Val-binding_protein

description:
  Mixed, incl. Branched-chain amino acid transport system / permease component, and Leu/Ile/Val-binding protein


id: CL:5700
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5700_Mixed,_incl._Branched-chain_amino_acid_transmembrane_transporter_activity,_and_Leu/Ile/Val-binding_protein

description:
  Mixed, incl. Branched-chain amino acid transmembrane transporter activity, and Leu/Ile/Val-binding protein


id: CL:5702
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5702_Branched-chain_amino_acid_transmembrane_transporter_activity,_and_Periplasmic_binding_protein_domain

description:
  Branched-chain amino acid transmembrane transporter activity, and Periplasmic binding protein domain


id: CL:5718
description: Branched-chain amino acid transport system / permease component
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5718_Branched-chain_amino_acid_transport_system_/_permease_component


id: CL:5727
description: Mixed, incl. Leu/Ile/Val-binding protein, and Branched-chain amino acid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5727_Mixed,_incl._Leu/Ile/Val-binding_protein,_and_Branched-chain_amino_acid_transport


id: CL:5728
description: Branched-chain amino acid transport, and Periplasmic binding protein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5728_Branched-chain_amino_acid_transport,_and_Periplasmic_binding_protein_domain


id: CL:5737
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5737_Mixed,_incl._Leu/Ile/Val-binding_protein,_and_Branched-chain_amino_acid_ATP-binding_cassette_transporter,_C-terminal

description:
  Mixed, incl. Leu/Ile/Val-binding protein, and Branched-chain amino acid ATP-binding cassette transporter, C-terminal


id: CL:5746
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5746_Mixed,_incl._Leu/Ile/Val-binding_protein,_and_Branched-chain_amino_acid_ATP-binding_cassette_transporter

description:
  Mixed, incl. Leu/Ile/Val-binding protein, and Branched-chain amino acid ATP-binding cassette transporter


id: CL:5768
description: Branched-chain amino acid ATP-binding cassette transporter, and Branched-chain amino acid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5768_Branched-chain_amino_acid_ATP-binding_cassette_transporter,_and_Branched-chain_amino_acid_transport


id: CL:577
description: RNA polymerase sigma-70, and ArsC family
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:577_RNA_polymerase_sigma-70,_and_ArsC_family


id: CL:5779
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5779_Branched-chain_amino_acid_ATP-binding_cassette_transporter,_C-terminal,_and_ABC_transporter,_permease

description:
  Branched-chain amino acid ATP-binding cassette transporter, C-terminal, and ABC transporter, permease


id: CL:5789
description: Amide binding, and ABC transporter, permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5789_Amide_binding,_and_ABC_transporter,_permease


id: CL:5799
description: ABC transporter, permease, and Leu/Ile/Val-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5799_ABC_transporter,_permease,_and_Leu/Ile/Val-binding_protein


id: CL:5819
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5819_Mixed,_incl._Receptor_family_ligand_binding_region,_and_Branched-chain_amino_acid_ATP-binding_cassette_transporter,_C-terminal

description:
  Mixed, incl. Receptor family ligand binding region, and Branched-chain amino acid ATP-binding cassette transporter, C-terminal


id: CL:5830
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5830_Mixed,_incl._Amide_binding,_and_Branched-chain_amino_acid_ATP-binding_cassette_transporter,_C-terminal

description:
  Mixed, incl. Amide binding, and Branched-chain amino acid ATP-binding cassette transporter, C-terminal


id: CL:5831
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5831_Mixed,_incl._Leu/Ile/Val-binding_protein,_and_Branched-chain_amino_acid_ATP-binding_cassette_transporter,_C-terminal

description:
  Mixed, incl. Leu/Ile/Val-binding protein, and Branched-chain amino acid ATP-binding cassette transporter, C-terminal


id: CL:5840
description: Mixed, incl. Branched-chain amino acid ATP-binding cassette transporter, and Amide binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5840_Mixed,_incl._Branched-chain_amino_acid_ATP-binding_cassette_transporter,_and_Amide_binding


id: CL:5854
description: ABC transporter, permease, and Periplasmic binding protein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5854_ABC_transporter,_permease,_and_Periplasmic_binding_protein_domain


id: CL:5855
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5855_Mixed,_incl._ABC_transporter,_permease,_and_Branched-chain_amino_acid_ATP-binding_cassette_transporter,_C-terminal

description:
  Mixed, incl. ABC transporter, permease, and Branched-chain amino acid ATP-binding cassette transporter, C-terminal


id: CL:5856
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5856_Mixed,_incl._ABC_transporter,_permease,_and_Branched-chain_amino_acid_ATP-binding_cassette_transporter,_C-terminal

description:
  Mixed, incl. ABC transporter, permease, and Branched-chain amino acid ATP-binding cassette transporter, C-terminal


id: CL:5858
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5858_Branched-chain_amino_acid_ATP-binding_cassette_transporter,_C-terminal,_and_ABC_transporter,_permease

description:
  Branched-chain amino acid ATP-binding cassette transporter, C-terminal, and ABC transporter, permease


id: CL:5868
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5868_Branched-chain_amino_acid_ATP-binding_cassette_transporter,_C-terminal,_and_ABC_transporter,_permease

description:
  Branched-chain amino acid ATP-binding cassette transporter, C-terminal, and ABC transporter, permease


id: CL:587
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:587_Mixed,_incl._Alkyl_hydroperoxide_reductase_subunit_C/_Thiol_specific_antioxidant,_and_Response_to_reactive_oxygen_species

description:
  Mixed, incl. Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant, and Response to reactive oxygen species


id: CL:5878
description: Branched-chain amino acid ATP-binding cassette transporter, and ABC transporter, permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5878_Branched-chain_amino_acid_ATP-binding_cassette_transporter,_and_ABC_transporter,_permease


id: CL:5889
description: Branched-chain amino acid ATP-binding cassette transporter, and ABC transporter, permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5889_Branched-chain_amino_acid_ATP-binding_cassette_transporter,_and_ABC_transporter,_permease


id: CL:5900
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5900_Branched-chain_amino_acid_ATP-binding_cassette_transporter,_C-terminal,_and_ABC_transporter,_permease

description:
[cell repeats an earlier one in this file: 101 characters]


id: CL:591
description: Reactive oxygen species metabolic process, and Peroxiredoxin, AhpC-type
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:591_Reactive_oxygen_species_metabolic_process,_and_Peroxiredoxin,_AhpC-type


id: CL:5913
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5913_Branched-chain_amino_acid_ATP-binding_cassette_transporter,_C-terminal,_and_ABC_transporter,_permease

description:
[cell repeats an earlier one in this file: 101 characters]


id: CL:5923
description: Mixed, incl. Periplasmic binding protein, and Branched-chain amino acid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5923_Mixed,_incl._Periplasmic_binding_protein,_and_Branched-chain_amino_acid_transport


id: CL:5924
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5924_Branched-chain_amino_acid_ATP-binding_cassette_transporter,_C-terminal,_and_ABC_transporter,_permease

description:
[cell repeats an earlier one in this file: 101 characters]


id: CL:5933
description: Periplasmic binding protein, and Branched-chain amino acid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5933_Periplasmic_binding_protein,_and_Branched-chain_amino_acid_transport


id: CL:5942
description: Amino acid transport, and ABC transporter, permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5942_Amino_acid_transport,_and_ABC_transporter,_permease


id: CL:5943
description: Mixed, incl. Periplasmic binding protein domain, and ABC transporter, permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5943_Mixed,_incl._Periplasmic_binding_protein_domain,_and_ABC_transporter,_permease


id: CL:5944
description: Periplasmic binding protein domain, and ABC transporter, permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5944_Periplasmic_binding_protein_domain,_and_ABC_transporter,_permease


id: CL:5947
description: Periplasmic binding protein domain, and ABC transporter, permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5947_Periplasmic_binding_protein_domain,_and_ABC_transporter,_permease


id: CL:5949
description: Mixed, incl. ABC transporter, permease, and Leu/Ile/Val-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5949_Mixed,_incl._ABC_transporter,_permease,_and_Leu/Ile/Val-binding_protein


id: CL:5951
description: Branched-chain amino acid ATP-binding cassette transporter, and ABC transporter, permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5951_Branched-chain_amino_acid_ATP-binding_cassette_transporter,_and_ABC_transporter,_permease


id: CL:5961
description: ABC transporter, permease, and ABC transporter-like, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5961_ABC_transporter,_permease,_and_ABC_transporter-like,_conserved_site


id: CL:5973
description: ABC transporter, permease, and Periplasmic binding protein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5973_ABC_transporter,_permease,_and_Periplasmic_binding_protein_domain


id: CL:5989
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:5989_Branched-chain_amino_acid_ATP-binding_cassette_transporter,_C-terminal,_and_ABC_transporter,_permease

description:
[cell repeats an earlier one in this file: 101 characters]


id: CL:6003
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6003_Mixed,_incl._Twin-arginine_translocation_pathway,_signal_sequence,_and_Branched-chain_amino_acid_ATP-binding_cassette_transporter,_C-terminal

description:
  Mixed, incl. Twin-arginine translocation pathway, signal sequence, and Branched-chain amino acid ATP-binding cassette transporter, C-terminal


id: CL:6018
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6018_Mixed,_incl._Leu/Ile/Val-binding_protein,_and_Branched-chain_amino_acid_ATP-binding_cassette_transporter

description:
  Mixed, incl. Leu/Ile/Val-binding protein, and Branched-chain amino acid ATP-binding cassette transporter


id: CL:6033
description: Periplasmic binding protein, and Branched-chain amino acid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6033_Periplasmic_binding_protein,_and_Branched-chain_amino_acid_transport


id: CL:6044
description: Mostly uncharacterized, incl. Glyoxalase-like domain, and Carboxylesterase type B, active site
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6044_Mostly_uncharacterized,_incl._Glyoxalase-like_domain,_and_Carboxylesterase_type_B,_active_site


id: CL:6047
description: ABC transporter, permease, and ABC transporter-like, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6047_ABC_transporter,_permease,_and_ABC_transporter-like,_conserved_site


id: CL:6066
description: Mixed, incl. BB2672 superfamily, and Amide binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6066_Mixed,_incl._BB2672_superfamily,_and_Amide_binding


id: CL:6067
description: Mixed, incl. Amide binding, and NAD(P)-binding Rossmann-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6067_Mixed,_incl._Amide_binding,_and_NAD(P)-binding_Rossmann-like_domain


id: CL:6069
description: Mixed, incl. TonB-dependent siderophore receptor, and Leu/Ile/Val-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6069_Mixed,_incl._TonB-dependent_siderophore_receptor,_and_Leu/Ile/Val-binding_protein


id: CL:6087
description: BB2672 superfamily, and ApbE-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6087_BB2672_superfamily,_and_ApbE-like_superfamily


id: CL:6102
description: Mixed, incl. SnoaL-like domain, and Ketosteroid monooxygenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6102_Mixed,_incl._SnoaL-like_domain,_and_Ketosteroid_monooxygenase_activity


id: CL:614
description: DNA metabolic process, and Lipoprotein transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:614_DNA_metabolic_process,_and_Lipoprotein_transport


id: CL:6140
description: Mostly uncharacterized, incl. 5-carboxymethyl-2-hydroxymuconate isomerase, and Gram-negative porin
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6140_Mostly_uncharacterized,_incl._5-carboxymethyl-2-hydroxymuconate_isomerase,_and_Gram-negative_porin


id: CL:6142
description: Mixed, incl. Gram-negative porin, and Reductase C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6142_Mixed,_incl._Gram-negative_porin,_and_Reductase_C-terminal


id: CL:615
description: DNA metabolic process, and RNA-DNA hybrid ribonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:615_DNA_metabolic_process,_and_RNA-DNA_hybrid_ribonuclease_activity


id: CL:617
description: Catalytic activity, acting on DNA, and RNA-DNA hybrid ribonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:617_Catalytic_activity,_acting_on_DNA,_and_RNA-DNA_hybrid_ribonuclease_activity


id: CL:6178
description: Mixed, incl. Metallo-beta-lactamase, and Transcription regulator LuxR, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6178_Mixed,_incl._Metallo-beta-lactamase,_and_Transcription_regulator_LuxR,_C-terminal


id: CL:618
description: Mismatch repair, and SOS response
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:618_Mismatch_repair,_and_SOS_response


id: CL:6180
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6180_Mixed,_incl._Helix_turn_helix,_Arsenical_Resistance_Operon_Repressor,_and_UDP-N-acetylglucosamine_metabolic_process

description:
  Mixed, incl. Helix_turn_helix, Arsenical Resistance Operon Repressor, and UDP-N-acetylglucosamine metabolic process


id: CL:619
description: DNA replication, and DNA repair complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:619_DNA_replication,_and_DNA_repair_complex


id: CL:62
description: Gene expression, and Nucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:62_Gene_expression,_and_Nucleoside_triphosphate_biosynthetic_process


id: CL:620
description: Nucleotide excision repair, and Damaged DNA binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:620_Nucleotide_excision_repair,_and_Damaged_DNA_binding


id: CL:6207
description: Mixed, incl. Receptor family ligand binding region, and Transcription regulators MarR/SlyA-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6207_Mixed,_incl._Receptor_family_ligand_binding_region,_and_Transcription_regulators_MarR/SlyA-like


id: CL:621
description: DNA repair complex, and UvrD/REP helicase N-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:621_DNA_repair_complex,_and_UvrD/REP_helicase_N-terminal_domain


id: CL:6219
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6219_Mixed,_incl._HTH-type_transcriptional_repressor_KstR2,_C-terminal,_and_L-methylmalonyl-CoA_metabolic_process

description:
  Mixed, incl. HTH-type transcriptional repressor KstR2, C-terminal, and L-methylmalonyl-CoA metabolic process


id: CL:6220
description: Mixed, incl. HTH-type transcriptional repressor KstR2, C-terminal, and L-amino acid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6220_Mixed,_incl._HTH-type_transcriptional_repressor_KstR2,_C-terminal,_and_L-amino_acid_transport


id: CL:6222
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6222_Mixed,_incl._(2,3-dihydroxybenzoyl)adenylate_synthase_activity,_and_L-methylmalonyl-CoA_metabolic_process

description:
  Mixed, incl. (2,3-dihydroxybenzoyl)adenylate synthase activity, and L-methylmalonyl-CoA metabolic process


id: CL:623
description: DNA damage sensor activity, and DNA/RNA polymerase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:623_DNA_damage_sensor_activity,_and_DNA/RNA_polymerase_superfamily


id: CL:6244
description: Mixed, incl. L-methylmalonyl-CoA metabolic process, and Aminotransferase, class I/classII
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6244_Mixed,_incl._L-methylmalonyl-CoA_metabolic_process,_and_Aminotransferase,_class_I/classII


id: CL:6258
description: Mixed, incl. Helix_turn_helix multiple antibiotic resistance protein, and Tyrosine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6258_Mixed,_incl._Helix_turn_helix_multiple_antibiotic_resistance_protein,_and_Tyrosine_metabolism


id: CL:6259
description: Mixed, incl. Tyrosine metabolism, and Urate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6259_Mixed,_incl._Tyrosine_metabolism,_and_Urate_metabolic_process


id: CL:6261
description: Mixed, incl. Gentisate 1,2-dioxygenase-like, and Lycopene cyclase protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6261_Mixed,_incl._Gentisate_1,2-dioxygenase-like,_and_Lycopene_cyclase_protein


id: CL:6262
description: Mixed, incl. Lycopene cyclase protein, and Domain of unknown function (DUF4440)
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6262_Mixed,_incl._Lycopene_cyclase_protein,_and_Domain_of_unknown_function_(DUF4440)


id: CL:6273
description: Mixed, incl. Gentisate 1,2-dioxygenase-like, and Lycopene cyclase protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6273_Mixed,_incl._Gentisate_1,2-dioxygenase-like,_and_Lycopene_cyclase_protein


id: CL:6289
description: Mixed, incl. Tyrosine catabolic process, and Glutathione S-transferase, C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6289_Mixed,_incl._Tyrosine_catabolic_process,_and_Glutathione_S-transferase,_C-terminal_domain


id: CL:6291
description: Tyrosine catabolic process, and Glutathione S-transferase, C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6291_Tyrosine_catabolic_process,_and_Glutathione_S-transferase,_C-terminal_domain


id: CL:63
description: Mixed, incl. Translation, and Nucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:63_Mixed,_incl._Translation,_and_Nucleoside_triphosphate_biosynthetic_process


id: CL:6308
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6308_Helix_turn_helix_multiple_antibiotic_resistance_protein,_and_2-amino-3-carboxymuconate-6-semialdehyde_decarboxylase

description:
  Helix_turn_helix multiple antibiotic resistance protein, and 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase


id: CL:6310
description: Helix_turn_helix multiple antibiotic resistance protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6310_Helix_turn_helix_multiple_antibiotic_resistance_protein


id: CL:6311
description: Helix_turn_helix multiple antibiotic resistance protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6311_Helix_turn_helix_multiple_antibiotic_resistance_protein


id: CL:6343
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6343_Mostly_uncharacterized,_incl._Glyoxalase/Bleomycin_resistance_protein/Dioxygenase_superfamily,_and_Putative_sodium_bile_acid_cotransporter

description:
  Mostly uncharacterized, incl. Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily, and Putative sodium bile acid cotransporter


id: CL:6344
description: Mostly uncharacterized, incl. Supramolecular complex, and Response to antibiotic
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6344_Mostly_uncharacterized,_incl._Supramolecular_complex,_and_Response_to_antibiotic


id: CL:6345
description: Mostly uncharacterized, incl. PhnB-like, and Hydrocarbon metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6345_Mostly_uncharacterized,_incl._PhnB-like,_and_Hydrocarbon_metabolic_process


id: CL:6346
description: Mixed, incl. PhnB-like, and Alkylhydroperoxidase AhpD core
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6346_Mixed,_incl._PhnB-like,_and_Alkylhydroperoxidase_AhpD_core


id: CL:6347
description: Mixed, incl. PhnB-like, and Gcn5-related N-acetyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6347_Mixed,_incl._PhnB-like,_and_Gcn5-related_N-acetyltransferase


id: CL:6356
description: Mixed, incl. Alkylhydroperoxidase AhpD core, and Protein of unknown function DUF488
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6356_Mixed,_incl._Alkylhydroperoxidase_AhpD_core,_and_Protein_of_unknown_function_DUF488


id: CL:6365
description: Mixed, incl. Hydrocarbon metabolic process, and Quinoprotein amine dehydrogenase, beta chain-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6365_Mixed,_incl._Hydrocarbon_metabolic_process,_and_Quinoprotein_amine_dehydrogenase,_beta_chain-like


id: CL:6376
description: Mixed, incl. Supramolecular complex, and Sulfite exporter TauE/SafE
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6376_Mixed,_incl._Supramolecular_complex,_and_Sulfite_exporter_TauE/SafE


id: CL:6377
description: Mixed, incl. Nucleoplasm, and Glutathione S-transferase, N-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6377_Mixed,_incl._Nucleoplasm,_and_Glutathione_S-transferase,_N-terminal_domain


id: CL:6390
description: Mixed, incl. Cell-cell signaling, and Sulfite exporter TauE/SafE
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6390_Mixed,_incl._Cell-cell_signaling,_and_Sulfite_exporter_TauE/SafE


id: CL:6399
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6399_Mixed,_incl._Putative_sodium_bile_acid_cotransporter,_and_AraC-type_arabinose-binding/dimerisation_domain

description:
  Mixed, incl. Putative sodium bile acid cotransporter, and AraC-type arabinose-binding/dimerisation domain


id: CL:6401
description: Mixed, incl. Citrate transporter, and Protein trimerization
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6401_Mixed,_incl._Citrate_transporter,_and_Protein_trimerization


id: CL:6421
description: Mixed, incl. Nucleobase metabolic process, and Carbohydrate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6421_Mixed,_incl._Nucleobase_metabolic_process,_and_Carbohydrate_transport


id: CL:6422
description: Mixed, incl. Nucleobase metabolic process, and [2Fe-2S] binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6422_Mixed,_incl._Nucleobase_metabolic_process,_and_[2Fe-2S]_binding_domain


id: CL:6423
description: Mixed, incl. Purine nucleobase metabolic process, and [2Fe-2S] binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6423_Mixed,_incl._Purine_nucleobase_metabolic_process,_and_[2Fe-2S]_binding_domain


id: CL:6424
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6424_Mixed,_incl._Aldehyde_oxidase/xanthine_dehydrogenase,_molybdopterin_binding_domain_superfamily,_and_Furfural_degradation

description:
  Mixed, incl. Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily, and Furfural degradation


id: CL:6425
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6425_Mixed,_incl._Aldehyde_oxidase/xanthine_dehydrogenase,_molybdopterin_binding_domain_superfamily,_and_[2Fe-2S]-binding

description:
  Mixed, incl. Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily, and [2Fe-2S]-binding


id: CL:6427
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6427_Aldehyde_oxidase/xanthine_dehydrogenase,_molybdopterin_binding_domain_superfamily,_and_[2Fe-2S]-binding

description:
  Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily, and [2Fe-2S]-binding


id: CL:6428
description: Aldehyde oxidase/xanthine dehydrogenase, and Molybdopterin dehydrogenase, FAD-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6428_Aldehyde_oxidase/xanthine_dehydrogenase,_and_Molybdopterin_dehydrogenase,_FAD-binding


id: CL:6429
description: Molybdopterin dehydrogenase, FAD-binding, and [2Fe-2S]-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6429_Molybdopterin_dehydrogenase,_FAD-binding,_and_[2Fe-2S]-binding


id: CL:6440
description: Furfural degradation, and Aldehyde oxidase/xanthine dehydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6440_Furfural_degradation,_and_Aldehyde_oxidase/xanthine_dehydrogenase


id: CL:6449
description: Mixed, incl. Oxidoreductase molybdopterin-binding subunit, IorB-related, and [2Fe-2S]-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6449_Mixed,_incl._Oxidoreductase_molybdopterin-binding_subunit,_IorB-related,_and_[2Fe-2S]-binding


id: CL:646
description: UmuC domain, and Peptidase S24-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:646_UmuC_domain,_and_Peptidase_S24-like


id: CL:6468
description: Furfural degradation, and Biotin metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6468_Furfural_degradation,_and_Biotin_metabolic_process


id: CL:6479
description: Pyruvate, water dikinase activity, and Furfural degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6479_Pyruvate,_water_dikinase_activity,_and_Furfural_degradation


id: CL:6491
description: Mixed, incl. Purine metabolism, and Urate oxidase N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6491_Mixed,_incl._Purine_metabolism,_and_Urate_oxidase_N-terminal


id: CL:6492
description: Purine metabolism, and Urate oxidase N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6492_Purine_metabolism,_and_Urate_oxidase_N-terminal


id: CL:65
description: Mixed, incl. Translation, and Nucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:65_Mixed,_incl._Translation,_and_Nucleoside_triphosphate_biosynthetic_process


id: CL:6503
description: Aldehyde oxidase/xanthine dehydrogenase, and XdhC- CoxI
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6503_Aldehyde_oxidase/xanthine_dehydrogenase,_and_XdhC-_CoxI


id: CL:6512
description: Mixed, incl. Isochorismatase family, and Oxoprolinase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6512_Mixed,_incl._Isochorismatase_family,_and_Oxoprolinase_family


id: CL:6514
description: Mixed, incl. Isochorismatase family, and Oxoprolinase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6514_Mixed,_incl._Isochorismatase_family,_and_Oxoprolinase_family


id: CL:6515
description: Mixed, incl. Isochorismatase family, and Maleate isomerase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6515_Mixed,_incl._Isochorismatase_family,_and_Maleate_isomerase_activity


id: CL:6517
description: Isochorismatase family, and Maleate isomerase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6517_Isochorismatase_family,_and_Maleate_isomerase_activity


id: CL:6518
description: Maleate isomerase activity, and Nicotinate and nicotinamide metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6518_Maleate_isomerase_activity,_and_Nicotinate_and_nicotinamide_metabolism


id: CL:6519
description: Maleate isomerase activity, and Isochorismatase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6519_Maleate_isomerase_activity,_and_Isochorismatase_family


id: CL:6528
description: Nicotinate and nicotinamide metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6528_Nicotinate_and_nicotinamide_metabolism


id: CL:6576
description: Mixed, incl. Regulation of polysaccharide metabolic process, and Cell surface
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6576_Mixed,_incl._Regulation_of_polysaccharide_metabolic_process,_and_Cell_surface


id: CL:6585
description: Mixed, incl. Carbohydrate transport, and AraC-binding-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6585_Mixed,_incl._Carbohydrate_transport,_and_AraC-binding-like_domain


id: CL:6587
description: Carbohydrate transport, and NodB homology domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6587_Carbohydrate_transport,_and_NodB_homology_domain


id: CL:6588
description: Carbohydrate transport, and Branched-chain amino acid transport system / permease component
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6588_Carbohydrate_transport,_and_Branched-chain_amino_acid_transport_system_/_permease_component


id: CL:6590
description: Carbohydrate transport, and Branched-chain amino acid transport system / permease component
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6590_Carbohydrate_transport,_and_Branched-chain_amino_acid_transport_system_/_permease_component


id: CL:66
description: Mixed, incl. Translation, and Nucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:66_Mixed,_incl._Translation,_and_Nucleoside_triphosphate_biosynthetic_process


id: CL:6611
description: Mixed, incl. Periplasmic binding protein, and Pentose transmembrane transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6611_Mixed,_incl._Periplasmic_binding_protein,_and_Pentose_transmembrane_transport


id: CL:6623
description: Mixed, incl. AraC-binding-like domain, and MatE
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6623_Mixed,_incl._AraC-binding-like_domain,_and_MatE


id: CL:6625
description: Mixed, incl. Domain of unknown function (DUF4351), and Luciferase-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6625_Mixed,_incl._Domain_of_unknown_function_(DUF4351),_and_Luciferase-like_domain


id: CL:6643
description: Mixed, incl. Iron ion homeostasis, and ABC-type transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6643_Mixed,_incl._Iron_ion_homeostasis,_and_ABC-type_transporter_activity


id: CL:6644
description: Mixed, incl. Iron ion homeostasis, and ABC-type transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6644_Mixed,_incl._Iron_ion_homeostasis,_and_ABC-type_transporter_activity


id: CL:6647
description: Mixed, incl. Iron ion homeostasis, and ABC-type transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6647_Mixed,_incl._Iron_ion_homeostasis,_and_ABC-type_transporter_activity


id: CL:6649
description: Mixed, incl. Bacterial extracellular solute-binding protein, and ABC-type transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6649_Mixed,_incl._Bacterial_extracellular_solute-binding_protein,_and_ABC-type_transporter_activity


id: CL:6651
description: Mixed, incl. ABC-type transporter activity, and Ferric binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6651_Mixed,_incl._ABC-type_transporter_activity,_and_Ferric_binding_protein


id: CL:6652
description: Mixed, incl. Polyamine binding, and ABC-type polyamine transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6652_Mixed,_incl._Polyamine_binding,_and_ABC-type_polyamine_transporter_activity


id: CL:6653
description: Mixed, incl. Polyamine binding, and ABC-type polyamine transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6653_Mixed,_incl._Polyamine_binding,_and_ABC-type_polyamine_transporter_activity


id: CL:6668
description: Mixed, incl. ArsC family, and Spermidine/putrescine ABC transporter, ATP-binding subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6668_Mixed,_incl._ArsC_family,_and_Spermidine/putrescine_ABC_transporter,_ATP-binding_subunit


id: CL:6678
description: Mixed, incl. Ferric binding protein, and Transport-associated OB, type 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6678_Mixed,_incl._Ferric_binding_protein,_and_Transport-associated_OB,_type_2


id: CL:6681
description: Ferric binding protein, and ABC-type transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6681_Ferric_binding_protein,_and_ABC-type_transporter_activity


id: CL:6722
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6722_Mixed,_incl._Tripartite_tricarboxylate_transporter_family_receptor,_and_Tripartite_tricarboxylate_transporter_TctA_family

description:
  Mixed, incl. Tripartite tricarboxylate transporter family receptor, and Tripartite tricarboxylate transporter TctA family


id: CL:6723
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6723_Mixed,_incl._Tripartite_tricarboxylate_transporter_family_receptor,_and_Tripartite_tricarboxylate_transporter_TctA_family

description:
  Mixed, incl. Tripartite tricarboxylate transporter family receptor, and Tripartite tricarboxylate transporter TctA family


id: CL:6725
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6725_Tripartite_tricarboxylate_transporter_family_receptor,_and_Tripartite_tricarboxylate_transporter_TctA_family

description:
  Tripartite tricarboxylate transporter family receptor, and Tripartite tricarboxylate transporter TctA family


id: CL:6741
description: C4-dicarboxylate transport, and TRAP transporter large membrane protein DctM
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6741_C4-dicarboxylate_transport,_and_TRAP_transporter_large_membrane_protein_DctM


id: CL:6750
description: Mixed, incl. Response to pH, and Cell inner membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6750_Mixed,_incl._Response_to_pH,_and_Cell_inner_membrane


id: CL:6760
description: Mixed, incl. Pirin, and Sugar transporter, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6760_Mixed,_incl._Pirin,_and_Sugar_transporter,_conserved_site


id: CL:6762
description: Mixed, incl. PGBD superfamily, and Pirin, C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6762_Mixed,_incl._PGBD_superfamily,_and_Pirin,_C-terminal_domain


id: CL:6778
description: Mixed, incl. Pirin, and Hexapeptide transferase, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6778_Mixed,_incl._Pirin,_and_Hexapeptide_transferase,_conserved_site


id: CL:6792
description: Mixed, incl. DNA binding, and Nucleic acid phosphodiester bond hydrolysis
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6792_Mixed,_incl._DNA_binding,_and_Nucleic_acid_phosphodiester_bond_hydrolysis


id: CL:6793
description: Mixed, incl. Toxin-antitoxin complex, and Nucleic acid phosphodiester bond hydrolysis
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6793_Mixed,_incl._Toxin-antitoxin_complex,_and_Nucleic_acid_phosphodiester_bond_hydrolysis


id: CL:6794
description: Mixed, incl. Toxin-antitoxin complex, and DNA modification
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6794_Mixed,_incl._Toxin-antitoxin_complex,_and_DNA_modification


id: CL:6795
description: Mixed, incl. Toxin-antitoxin complex, and DNA modification
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6795_Mixed,_incl._Toxin-antitoxin_complex,_and_DNA_modification


id: CL:6796
description: Mixed, incl. Toxin-antitoxin complex, and Ribbon-helix-helix
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6796_Mixed,_incl._Toxin-antitoxin_complex,_and_Ribbon-helix-helix


id: CL:6798
description: Mixed, incl. Toxin-antitoxin complex, and Ribbon-helix-helix
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6798_Mixed,_incl._Toxin-antitoxin_complex,_and_Ribbon-helix-helix


id: CL:6799
description: Mixed, incl. Toxin-antitoxin complex, and BrnA antitoxin of type II toxin-antitoxin system
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6799_Mixed,_incl._Toxin-antitoxin_complex,_and_BrnA_antitoxin_of_type_II_toxin-antitoxin_system


id: CL:68
description: Translation, and Nucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:68_Translation,_and_Nucleoside_triphosphate_biosynthetic_process


id: CL:680
description: Mixed, incl. DNA catabolic process, and Recombinational repair
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:680_Mixed,_incl._DNA_catabolic_process,_and_Recombinational_repair


id: CL:6800
description: Mixed, incl. Toxin-antitoxin complex, and RelE toxin of RelE / RelB toxin-antitoxin system
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6800_Mixed,_incl._Toxin-antitoxin_complex,_and_RelE_toxin_of_RelE_/_RelB_toxin-antitoxin_system


id: CL:6802
description: Mixed, incl. Response to hypoxia, and Transcription cis-regulatory region binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6802_Mixed,_incl._Response_to_hypoxia,_and_Transcription_cis-regulatory_region_binding


id: CL:6816
description: RelE toxin of RelE / RelB toxin-antitoxin system, and Toxin-antitoxin complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6816_RelE_toxin_of_RelE_/_RelB_toxin-antitoxin_system,_and_Toxin-antitoxin_complex


id: CL:6828
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6828_Mixed,_incl._BrnA_antitoxin_of_type_II_toxin-antitoxin_system,_and_Ribonuclease_toxin,_BrnT,_of_type_II_toxin-antitoxin_system

description:
  Mixed, incl. BrnA antitoxin of type II toxin-antitoxin system, and Ribonuclease toxin, BrnT, of type II toxin-antitoxin system


id: CL:6842
description: Mixed, incl. RES domain, and Antitoxin Xre-like, helix-turn-helix domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6842_Mixed,_incl._RES_domain,_and_Antitoxin_Xre-like,_helix-turn-helix_domain


id: CL:6844
description: RES domain, and Antitoxin Xre-like, helix-turn-helix domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6844_RES_domain,_and_Antitoxin_Xre-like,_helix-turn-helix_domain


id: CL:6862
description: Mixed, incl. PIN domain, and Arc-type ribbon-helix-helix
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6862_Mixed,_incl._PIN_domain,_and_Arc-type_ribbon-helix-helix


id: CL:6876
description: Uncharacterized protein HI1420, and Toxin HigB-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6876_Uncharacterized_protein_HI1420,_and_Toxin_HigB-like


id: CL:6892
description: DNA modification, and Fido domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6892_DNA_modification,_and_Fido_domain


id: CL:6894
description: DNA modification, and tRNA endonuclease-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6894_DNA_modification,_and_tRNA_endonuclease-like_domain_superfamily


id: CL:6914
description: Mixed, incl. HipA N-terminal domain, and Helix-turn-helix XRE-family like proteins
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6914_Mixed,_incl._HipA_N-terminal_domain,_and_Helix-turn-helix_XRE-family_like_proteins


id: CL:6916
description: Mixed, incl. Fido domain, and Glycosyltransferase Family 4
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6916_Mixed,_incl._Fido_domain,_and_Glycosyltransferase_Family_4


id: CL:6935
description: AtsA-like, MBL-fold, and Response to host
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6935_AtsA-like,_MBL-fold,_and_Response_to_host


id: CL:694
description: Four-way junction helicase activity, and tRNA-dihydrouridine synthase
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:694_Four-way_junction_helicase_activity,_and_tRNA-dihydrouridine_synthase


id: CL:6944
description: Mixed, incl. Transposase activity, and DNA integration
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6944_Mixed,_incl._Transposase_activity,_and_DNA_integration


id: CL:6945
description: Mixed, incl. Transposase activity, and HTH-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6945_Mixed,_incl._Transposase_activity,_and_HTH-like_domain


id: CL:6947
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6947_Mixed,_incl._Response_to_arsenic-containing_substance,_and_Helix_turn_helix,_Arsenical_Resistance_Operon_Repressor

description:
  Mixed, incl. Response to arsenic-containing substance, and Helix_turn_helix, Arsenical Resistance Operon Repressor


id: CL:6963
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6963_Mixed,_incl._DDE_transposase_retroviral_integrase_sub-family,_and_Lambda_repressor-like,_DNA-binding_domain_superfamily

description:
  Mixed, incl. DDE transposase retroviral integrase sub-family, and Lambda repressor-like, DNA-binding domain superfamily


id: CL:6976
description: TniQ, and DDE transposase retroviral integrase sub-family
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:6976_TniQ,_and_DDE_transposase_retroviral_integrase_sub-family


id: CL:711
description: Histone-like DNA-binding protein, and Regulation of DNA replication
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:711_Histone-like_DNA-binding_protein,_and_Regulation_of_DNA_replication


id: CL:72
description: Mixed, incl. Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:72_Mixed,_incl._Ribosome,_and_Translation_regulator_activity


id: CL:724
description: Lipoprotein transport, and DHHA1 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:724_Lipoprotein_transport,_and_DHHA1_domain


id: CL:73
description: Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:73_Ribosome,_and_Translation_regulator_activity


id: CL:74
description: Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:74_Ribosome,_and_Translation_regulator_activity


id: CL:740
description: rRNA (uridine) methyltransferase activity, and NusB-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:740_rRNA_(uridine)_methyltransferase_activity,_and_NusB-like_superfamily


id: CL:75
description: Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:75_Ribosome,_and_Translation_regulator_activity


id: CL:754
description: Isoprenoid metabolic process, and Amine oxidase
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:754_Isoprenoid_metabolic_process,_and_Amine_oxidase


id: CL:755
description: Isoprene biosynthesis, and De novo CTP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:755_Isoprene_biosynthesis,_and_De_novo_CTP_biosynthetic_process


id: CL:769
description: Mixed, incl. De novo CTP biosynthetic process, and CDP-diacylglycerol metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:769_Mixed,_incl._De_novo_CTP_biosynthetic_process,_and_CDP-diacylglycerol_metabolic_process


id: CL:77
description: Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:77_Ribosome,_and_Translation_regulator_activity


id: CL:780
description: Isoprenoid synthase domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:780_Isoprenoid_synthase_domain_superfamily


id: CL:79
description: Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:79_Ribosome,_and_Translation_regulator_activity


id: CL:793
description: Mixed, incl. Glycerolipid metabolism, and tRNA threonylcarbamoyladenosine modification
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:793_Mixed,_incl._Glycerolipid_metabolism,_and_tRNA_threonylcarbamoyladenosine_modification


id: CL:794
description: Mixed, incl. tRNA threonylcarbamoyladenosine modification, and Metalloendopeptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:794_Mixed,_incl._tRNA_threonylcarbamoyladenosine_modification,_and_Metalloendopeptidase_activity


id: CL:797
description: Mixed, incl. Glutaredoxin, and Uracil-DNA glycosylase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:797_Mixed,_incl._Glutaredoxin,_and_Uracil-DNA_glycosylase-like


id: CL:815
description: Mixed, incl. AAA domain, and Methylthiotransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:815_Mixed,_incl._AAA_domain,_and_Methylthiotransferase


id: CL:829
description: Mixed, incl. Glycerolipid metabolism, and glycyl-tRNA aminoacylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:829_Mixed,_incl._Glycerolipid_metabolism,_and_glycyl-tRNA_aminoacylation


id: CL:83
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:83_Structural_constituent_of_ribosome


id: CL:831
description: Alditol phosphate metabolic process, and Phospholipid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:831_Alditol_phosphate_metabolic_process,_and_Phospholipid_metabolism


id: CL:845
description: glycyl-tRNA aminoacylation, and Methylglyoxal metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:845_glycyl-tRNA_aminoacylation,_and_Methylglyoxal_metabolic_process


id: CL:85
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:85_Structural_constituent_of_ribosome


id: CL:856
description: Mixed, incl. Cell division, and Regulation of cell shape
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:856_Mixed,_incl._Cell_division,_and_Regulation_of_cell_shape


id: CL:857
description: Cell division, and Regulation of cell shape
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:857_Cell_division,_and_Regulation_of_cell_shape


id: CL:863
description: Peptidoglycan synthesis, and Reproduction
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:863_Peptidoglycan_synthesis,_and_Reproduction


id: CL:865
description: Peptidoglycan synthesis, and Reproduction
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:865_Peptidoglycan_synthesis,_and_Reproduction


id: CL:867
description: Mur ligase, central, and Vancomycin resistance
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:867_Mur_ligase,_central,_and_Vancomycin_resistance


id: CL:89
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:89_Structural_constituent_of_ribosome


id: CL:91
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:91_Structural_constituent_of_ribosome


id: CL:925
description: Mixed, incl. Cell cycle process, and Helix-hairpin-helix DNA-binding motif class 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:925_Mixed,_incl._Cell_cycle_process,_and_Helix-hairpin-helix_DNA-binding_motif_class_1


id: CL:926
description: Mixed, incl. NUDIX domain, and Coenzyme A biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:926_Mixed,_incl._NUDIX_domain,_and_Coenzyme_A_biosynthesis


id: CL:93
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:93_Structural_constituent_of_ribosome


id: CL:94
description: Large ribosomal subunit, and Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:94_Large_ribosomal_subunit,_and_Structural_constituent_of_ribosome


id: CL:940
description: Chromosome partition, and DNA ligase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:940_Chromosome_partition,_and_DNA_ligase_activity


id: CL:95
description: Large ribosomal subunit, and Large ribosomal subunit rRNA binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:95_Large_ribosomal_subunit,_and_Large_ribosomal_subunit_rRNA_binding


id: CL:952
description: Mixed, incl. TAT protein transport complex, and Peptidoglycan muralytic activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:952_Mixed,_incl._TAT_protein_transport_complex,_and_Peptidoglycan_muralytic_activity


id: CL:954
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:954_Mixed,_incl._Regulation_of_protein_catabolic_process,_and_Glutathione_S-transferase,_C-terminal_domain

description:
  Mixed, incl. Regulation of protein catabolic process, and Glutathione S-transferase, C-terminal domain


id: CL:969
description: TAT protein transport complex, and N-acetylmuramoyl-L-alanine amidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:969_TAT_protein_transport_complex,_and_N-acetylmuramoyl-L-alanine_amidase_activity


id: CL:984
description: Amidase, and asparaginyl-tRNA synthase (glutamine-hydrolyzing) activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:984_Amidase,_and_asparaginyl-tRNA_synthase_(glutamine-hydrolyzing)_activity


id: CL:988
name:
  Local Network Cluster (STRING).STRING_v12.0_1231391_STRINGid_CL:988_glutaminyl-tRNA_synthase_(glutamine-hydrolyzing)_activity,_and_Ribosomal_protein_L25/Gln-tRNA_synthetase,_N-terminal

description:
  glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity, and Ribosomal protein L25/Gln-tRNA synthetase, N-terminal


id: GO:0000122
description: Negative regulation of transcription by RNA polymerase II
memo: https://amigo.geneontology.org/amigo/term/GO:0000122
golevel: 10
name:
  GOBP.STRING_v12.0_1231391_STRINGid_GO:0000122_Negative_regulation_of_transcription_by_RNA_polymerase_II


id: GO:0000462
description: Maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
memo: https://amigo.geneontology.org/amigo/term/GO:0000462
golevel: 7
name:
  GOBP.STRING_v12.0_1231391_STRINGid_GO:0000462_Maturation_of_SSU-rRNA_from_tricistronic_rRNA_transcript_(SSU-rRNA,_5.8S_rRNA,_LSU-rRNA)


id: GO:0000701
description: Purine-specific mismatch base pair DNA N-glycosylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0000701
golevel: 6
name:
  GOMF.STRING_v12.0_1231391_STRINGid_GO:0000701_Purine-specific_mismatch_base_pair_DNA_N-glycosylase_activity


id: GO:0000716
description: Transcription-coupled nucleotide-excision repair, DNA damage recognition
memo: https://amigo.geneontology.org/amigo/term/GO:0000716
golevel: 7
name:
  GOBP.STRING_v12.0_1231391_STRINGid_GO:0000716_Transcription-coupled_nucleotide-excision_repair,_DNA_damage_recognition


id: GO:0000724
description: Double-strand break repair via homologous recombination
memo: https://amigo.geneontology.org/amigo/term/GO:0000724
golevel: 7
name:
  GOBP.STRING_v12.0_1231391_STRINGid_GO:0000724_Double-strand_break_repair_via_homologous_recombination


id: GO:0000820
description: Regulation of glutamine family amino acid metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0000820
name:
  GOBP.STRING_v12.0_1231391_STRINGid_GO:0000820_Regulation_of_glutamine_family_amino_acid_metabolic_process


id: GO:0001073
description: Transcription antitermination factor activity, DNA binding
memo: https://amigo.geneontology.org/amigo/term/GO:0001073
golevel: 2
name:
  GOMF.STRING_v12.0_1231391_STRINGid_GO:0001073_Transcription_antitermination_factor_activity,_DNA_binding


id: GO:0003848
description: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003848
golevel: 5
name:
  GOMF.STRING_v12.0_1231391_STRINGid_GO:0003848_2-amino-4-hydroxy-6-hydroxymethyldihydropteridine_diphosphokinase_activity


id: GO:0003864
description: 3-methyl-2-oxobutanoate hydroxymethyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003864
golevel: 5
name:
  GOMF.STRING_v12.0_1231391_STRINGid_GO:0003864_3-methyl-2-oxobutanoate_hydroxymethyltransferase_activity


id: GO:0003871
description: 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003871
golevel: 6
name:
  GOMF.STRING_v12.0_1231391_STRINGid_GO:0003871_5-methyltetrahydropteroyltriglutamate-homocysteine_S-methyltransferase_activity


id: GO:0003882
description: CDP-diacylglycerol-serine O-phosphatidyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003882
golevel: 6
name:
  GOMF.STRING_v12.0_1231391_STRINGid_GO:0003882_CDP-diacylglycerol-serine_O-phosphatidyltransferase_activity


id: GO:0003906
description: DNA-(apurinic or apyrimidinic site) endonuclease activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003906
golevel: 6
name:
  GOMF.STRING_v12.0_1231391_STRINGid_GO:0003906_DNA-(apurinic_or_apyrimidinic_site)_endonuclease_activity


id: GO:0003908
description: methylated-DNA-[protein]-cysteine S-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003908
golevel: 4
name:
  GOMF.STRING_v12.0_1231391_STRINGid_GO:0003908_methylated-DNA-[protein]-cysteine_S-methyltransferase_activity


id: GO:0003917
description: DNA topoisomerase type I (single strand cut, ATP-independent) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003917
golevel: 5
name:
  GOMF.STRING_v12.0_1231391_STRINGid_GO:0003917_DNA_topoisomerase_type_I_(single_strand_cut,_ATP-independent)_activity


id: GO:0003918
description: DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003918
golevel: 3
name:
  GOMF.STRING_v12.0_1231391_STRINGid_GO:0003918_DNA_topoisomerase_type_II_(double_strand_cut,_ATP-hydrolyzing)_activity


id: GO:0003949
memo: https://amigo.geneontology.org/amigo/term/GO:0003949
golevel: 5
name:
  GOMF.STRING_v12.0_1231391_STRINGid_GO:0003949_1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide_isomerase_activity

description:
  1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity


id: GO:0003992
description: N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003992
golevel: 5
name:
  GOMF.STRING_v12.0_1231391_STRINGid_GO:0003992_N2-acetyl-L-ornithine:2-oxoglutarate_5-aminotransferase_activity


id: GO:0004015
description: adenosylmethionine-8-amino-7-oxononanoate transaminase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004015
golevel: 5
name:
  GOMF.STRING_v12.0_1231391_STRINGid_GO:0004015_adenosylmethionine-8-amino-7-oxononanoate_transaminase_activity


id: GO:0004018
description: N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004018
golevel: 5
name:
  GOMF.STRING_v12.0_1231391_STRINGid_GO:0004018_N6-(1,2-dicarboxyethyl)AMP_AMP-lyase_(fumarate-forming)_activity


id: GO:0004088
description: Carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004088
golevel: 5
name:
  GOMF.STRING_v12.0_1231391_STRINGid_GO:0004088_Carbamoyl-phosphate_synthase_(glutamine-hydrolyzing)_activity


id: GO:0004149
description: Dihydrolipoyllysine-residue succinyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004149
golevel: 3
name:
  GOMF.STRING_v12.0_1231391_STRINGid_GO:0004149_Dihydrolipoyllysine-residue_succinyltransferase_activity


id: GO:0004174
description: Electron-transferring-flavoprotein dehydrogenase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004174
golevel: 2
name:
  GOMF.STRING_v12.0_1231391_STRINGid_GO:0004174_Electron-transferring-flavoprotein_dehydrogenase_activity


id: GO:0004317
description: 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004317
name:
  GOMF.STRING_v12.0_1231391_STRINGid_GO:0004317_3-hydroxypalmitoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0004318
description: Enoyl-[acyl-carrier-protein] reductase (NADH) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004318
golevel: 6
name:
  GOMF.STRING_v12.0_1231391_STRINGid_GO:0004318_Enoyl-[acyl-carrier-protein]_reductase_(NADH)_activity


id: GO:0004360
description: glutamine-fructose-6-phosphate transaminase (isomerizing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004360
golevel: 6
name:
  GOMF.STRING_v12.0_1231391_STRINGid_GO:0004360_glutamine-fructose-6-phosphate_transaminase_(isomerizing)_activity


id: GO:0004365
description: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004365
golevel: 6
name:
  GOMF.STRING_v12.0_1231391_STRINGid_GO:0004365_glyceraldehyde-3-phosphate_dehydrogenase_(NAD+)_(phosphorylating)_activity


id: GO:0004486
description: Methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004486
name:
  GOMF.STRING_v12.0_1231391_STRINGid_GO:0004486_Methylenetetrahydrofolate_dehydrogenase_[NAD(P)+]_activity


