# geneInfo

ensembl_gene_id: LFZ48_10635
symbol: nuoH
gene_biotype: protein_coding
description:
  NADH:ubiquinone oxidoreductase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone.


ensembl_gene_id: LFZ48_10645
symbol: nuoJ
gene_biotype: protein_coding
description:
  NADH:ubiquinone oxidoreductase subunit J; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: LFZ48_10650
symbol: nuoK
gene_biotype: protein_coding
description:
  NADH:ubiquinone oxidoreductase subunit K; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family.


ensembl_gene_id: LFZ48_10655
symbol: KSB63731.1
gene_biotype: protein_coding
description:
  NADH:ubiquinone oxidoreductase subunit L; Catalyzes the transfer of electrons from NADH to ubiquinone; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_10660
symbol: KSB63732.1
gene_biotype: protein_coding
description:
  NADH:ubiquinone oxidoreductase subunit M; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_10665
symbol: nuoN
gene_biotype: protein_coding
description:
  NADH:ubiquinone oxidoreductase subunit N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family.


ensembl_gene_id: LFZ48_10670
symbol: KSB63734.1
gene_biotype: protein_coding
description:
  Chemotaxis protein CheV; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_10675
symbol: rbn
gene_biotype: protein_coding
description:
  Ribonuclease Z; Zinc phosphodiesterase, which has both exoribonuclease and endoribonuclease activities.


ensembl_gene_id: LFZ48_10685
symbol: elaB
gene_biotype: protein_coding
description:
  Protein ElaB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_10695
symbol: menD
gene_biotype: protein_coding
description:
  2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Belongs to the TPP enzyme family. MenD subfamily.


ensembl_gene_id: LFZ48_10700
symbol: menH
gene_biotype: protein_coding
description:
  2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase; Catalyzes a proton abstraction reaction that results in 2,5- elimination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC) and the formation of 2-succinyl-6- hydroxy-2,4-cyclohexadiene-1-carboxylate (SHCHC).


ensembl_gene_id: LFZ48_10705
symbol: menB
gene_biotype: protein_coding
description:
  Dihydroxynaphthoic acid synthetase; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA).


ensembl_gene_id: LFZ48_10710
symbol: menC
gene_biotype: protein_coding
description:
  O-succinylbenzoate synthase; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB).


ensembl_gene_id: LFZ48_10715
symbol: KSB63742.1
gene_biotype: protein_coding
description:
  O-succinylbenzoic acid--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_10720
symbol: pmrD
gene_biotype: protein_coding
description:
  Signal transduction protein PmrD; With BasR regulates genes involved in polymyxin resistance; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_10725
symbol: arnF
gene_biotype: protein_coding
description:
  4-amino-4-deoxy-L-arabinose-phospho-UDP flippase; Translocates 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol (alpha-L-Ara4N-phosphoundecaprenol) from the cytoplasmic to the periplasmic side of the inner membrane; Belongs to the ArnF family.


ensembl_gene_id: LFZ48_10730
symbol: arnE
gene_biotype: protein_coding
description:
  4-amino-4-deoxy-L-arabinose-phospho-UDP flippase; Translocates 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol (alpha-L-Ara4N-phosphoundecaprenol) from the cytoplasmic to the periplasmic side of the inner membrane; Belongs to the ArnE family.


ensembl_gene_id: LFZ48_10735
symbol: arnT
gene_biotype: protein_coding
description:
  4-amino-4-deoxy-L-arabinose transferase; Catalyzes the transfer of the L-Ara4N moiety of the glycolipid undecaprenyl phosphate-alpha-L-Ara4N to lipid A. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides. Belongs to the glycosyltransferase 83 family.


ensembl_gene_id: LFZ48_10740
symbol: arnD
gene_biotype: protein_coding
description:
  4-deoxy-4-formamido-L-arabinose-phospho-UDP deformylase; Catalyzes the deformylation of 4-deoxy-4-formamido-L- arabinose-phosphoundecaprenol to 4-amino-4-deoxy-L-arabinose- phosphoundecaprenol. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides; Belongs to the polysaccharide deacetylase family. ArnD deformylase subfamily.


ensembl_gene_id: LFZ48_10745
symbol: arnA
gene_biotype: protein_coding
description:
  UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Bifunctional enzyme that catalyzes the oxidative decarboxylation of UDP-glucuronic acid (UDP-GlcUA) to UDP-4-keto- arabinose (UDP-Ara4O) and the addition of a formyl group to UDP-4- amino-4-deoxy-L-arabinose (UDP-L-Ara4N) to form UDP-L-4-formamido- arabinose (UDP-L-Ara4FN). The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides; In the N-terminal section; belongs to the Fmt family. UDP- L-Ara4N formyltransferase subfamily.


ensembl_gene_id: LFZ48_10750
symbol: arnC
gene_biotype: protein_coding
description:
  UDP phosphate 4-deoxy-4-formamido-L-arabinose transferase; Catalyzes the transfer of 4-deoxy-4-formamido-L-arabinose from UDP to undecaprenyl phosphate. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides.


ensembl_gene_id: LFZ48_10755
symbol: arnB
gene_biotype: protein_coding
description:
  UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase; Catalyzes the conversion of UDP-4-keto-arabinose (UDP-Ara4O) to UDP-4-amino-4-deoxy-L-arabinose (UDP-L-Ara4N). The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides; Belongs to the DegT/DnrJ/EryC1 family. ArnB subfamily.


ensembl_gene_id: LFZ48_10760
symbol: ais
gene_biotype: protein_coding
description:
  Heptose kinase; Catalyzes the dephosphorylation of heptose(II) of the outer membrane lipopolysaccharide core.


ensembl_gene_id: LFZ48_10765
symbol: nudI
gene_biotype: protein_coding
description:
  Nucleoside triphosphatase; Catalyzes the hydrolysis of nucleoside triphosphates, with a preference for pyrimidine deoxynucleoside triphosphates (dUTP, dTTP and dCTP); Belongs to the Nudix hydrolase family. NudI subfamily.


ensembl_gene_id: LFZ48_10775
symbol: KSB63753.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CinA family.


ensembl_gene_id: LFZ48_10780
symbol: KSB63754.1
gene_biotype: protein_coding
description:
  Deubiquitinase SseL; Similar to ElaD; specific cysteine protease which targets ubiquitin and ubiquitin-like proteins covalently bound to target proteins; SseL in Salmonella is required for macrophage killing and virulence, and it is secreted by the salmonella pathogenicity island 2 type III secretion system; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_10790
symbol: glpC
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate dehydrogenase; Anaerobic; with GlpAB catalyzes the conversion of glycerol-3-phosphate to dihydroxyacetone phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_10795
symbol: glpB
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate dehydrogenase; Conversion of glycerol 3-phosphate to dihydroxyacetone. Uses fumarate or nitrate as electron acceptor.


ensembl_gene_id: LFZ48_10800
symbol: glpA
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate dehydrogenase; Anaerobic, catalyzes the conversion of glycerol 3-phosphate to dihydroxyacetone using fumarate or nitrate as electron acceptor; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: LFZ48_10805
symbol: glpT
gene_biotype: protein_coding
description:
  Sn-glycerol-3-phosphate transporter; Catalyzes the uptake of glycerol-3-phosphate into the cell with the simultaneous export of inorganic phosphate from the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_10810
symbol: glpQ
gene_biotype: protein_coding
description:
  Glycerophosphodiester phosphodiesterase; Hydrolyzes deacylated phospholipids to glycerol 3-phosphate and the corresponding alcohols; periplasmic; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_10825
symbol: yfaE
gene_biotype: protein_coding
description:
  2Fe-2S ferredoxin; Plays a role in maintenance and possibly the biosynthesis of diferric-tyrosyl radical cofactor, essential for nucleotide reduction catalyzed by ribonucleotide reductases; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_10830
symbol: KSB63763.1
gene_biotype: protein_coding
description:
  Ribonucleotide-diphosphate reductase subunit beta; B2 or R2 protein; type 1a enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_10835
symbol: KSB63764.1
gene_biotype: protein_coding
description:
  Ribonucleotide-diphosphate reductase subunit alpha; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.


ensembl_gene_id: LFZ48_10840
symbol: ubiG
gene_biotype: protein_coding
description:
  3-demethylubiquinone-9 3-methyltransferase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family.


ensembl_gene_id: LFZ48_10845
symbol: gyrA
gene_biotype: protein_coding
description:
  DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: LFZ48_10850
symbol: rcsC
gene_biotype: protein_coding
description:
  Histidine kinase; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsC functions as a membrane- associated protein kinase that phosphorylates RcsD in response to environmental signals. The phosphoryl group is then transferred to the response regulator RcsB.


ensembl_gene_id: LFZ48_10855
symbol: rcsB
gene_biotype: protein_coding
description:
  Transcriptional regulator; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsB is the response regulator that binds to regulatory DNA regions. Can function both in an RcsA-dependent or RcsA-independent manner.


ensembl_gene_id: LFZ48_10860
symbol: yojN
gene_biotype: protein_coding
description:
  Phosphotransfer intermediate protein in two-component regulatory system with RcsBC; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsD is a phosphotransfer intermediate between the sensor kinase RcsC and the response regulator RcsB. It acquires a phosphoryl group from RcsC and transfers it to RcsB.


ensembl_gene_id: LFZ48_10865
symbol: ompC_1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Gram-negative porin family.


ensembl_gene_id: LFZ48_10870
symbol: KSB63771.1
gene_biotype: protein_coding
description:
  Thiamine biosynthesis protein ApbE; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family.


ensembl_gene_id: LFZ48_10875
symbol: KSB63772.1
gene_biotype: protein_coding
description:
  6-O-methylguanine DNA methyltransferase; Regulates genes involved in the repair of alkylated DNA; repairs DNA containing 6-O-methylguanine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_10880
symbol: alkB
gene_biotype: protein_coding
description:
  Alpha-ketoglutarate-dependent dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_10885
symbol: KSB63774.1
gene_biotype: protein_coding
description:
  Multidrug transporter membrane component/ATP-binding component; Efflux pump for the antibacterial peptide microcin J25; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_10895
symbol: eco
gene_biotype: protein_coding
description:
  Ecotin; General inhibitor of pancreatic serine proteases: inhibits chymotrypsin, trypsin, elastases, factor X, kallikrein as well as a variety of other proteases.


ensembl_gene_id: LFZ48_10900
symbol: napF
gene_biotype: protein_coding
description:
  Ferredoxin; Could be involved in the maturation of NapA, the catalytic subunit of the periplasmic nitrate reductase, before its export into the periplasm; Belongs to the NapF family.


ensembl_gene_id: LFZ48_10905
symbol: napD
gene_biotype: protein_coding
description:
  Nitrate reductase; Chaperone for NapA, the catalytic subunit of the periplasmic nitrate reductase. It binds directly and specifically to the twin- arginine signal peptide of NapA, preventing premature interaction with the Tat translocase and premature export.


ensembl_gene_id: LFZ48_10910
symbol: napA
gene_biotype: protein_coding
description:
  Nitrate reductase; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite.


ensembl_gene_id: LFZ48_10915
symbol: napG
gene_biotype: protein_coding
description:
  Part of NapHG quinol dehydrogenase; couples electron transfer from ubiquinone-ubiquinol couple via NapC/B to NapA; secreted by twin arginine translocation pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_10920
symbol: napH
gene_biotype: protein_coding
description:
  Part of NapHG quinol dehydrogenase; couples electron transfer from ubiquinone-ubiquinol couple via NapC/B to NapA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_10925
symbol: napB
gene_biotype: protein_coding
description:
  Nitrate reductase; Electron transfer subunit of the periplasmic nitrate reductase complex NapAB; Belongs to the NapB family.


ensembl_gene_id: LFZ48_10930
symbol: napC
gene_biotype: protein_coding
description:
  With NapABDFGH functions as a nitrate reductase; NapC functions as an electron shuttle between NapAB and NapGH or quinone; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_10935
symbol: ccmA
gene_biotype: protein_coding
description:
  Cytochrome C biogenesis protein CcmA; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family.


ensembl_gene_id: LFZ48_10940
symbol: ccmB
gene_biotype: protein_coding
description:
  Heme ABC transporter permease; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmB/CycW/HelB family.


ensembl_gene_id: LFZ48_10945
symbol: ccmC
gene_biotype: protein_coding
description:
  Heme ABC transporter permease; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmC/CycZ/HelC family.


ensembl_gene_id: LFZ48_10950
symbol: ccmD
gene_biotype: protein_coding
description:
  Cytochrome C biogenesis protein CcmD; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmD/CycX/HelD family.


ensembl_gene_id: LFZ48_10955
symbol: ccmE
gene_biotype: protein_coding
description:
  Cytochrome C biogenesis protein CcmE; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. Belongs to the CcmE/CycJ family.


ensembl_gene_id: LFZ48_10960
symbol: KSB63788.1
gene_biotype: protein_coding
description:
  Cytochrome c-type biogenesis protein; required for the transfer of heme to apocytochrome c; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_10965
symbol: dsbE
gene_biotype: protein_coding
description:
  Disulfide bond formation protein DsbE; Cytochrome c-type biogenesis thioredoxin; involved in the reduction of disulfide bonds to allow heme bonding; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_10975
symbol: KSB63791.1
gene_biotype: protein_coding
description:
  Oxidoreductase; FAD/NAD(P)-binding domain; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_10990
symbol: ibpA
gene_biotype: protein_coding
description:
  Heat-shock protein IbpA; Associates with aggregated proteins, together with IbpB, to stabilize and protect them from irreversible denaturation and extensive proteolysis during heat shock and oxidative stress. Aggregated proteins bound to the IbpAB complex are more efficiently refolded and reactivated by the ATP-dependent chaperone systems ClpB and DnaK/DnaJ/GrpE. Its activity is ATP-independent.


ensembl_gene_id: LFZ48_10995
symbol: ibpB
gene_biotype: protein_coding
description:
  Heat-shock protein; Associates with aggregated proteins, together with IbpA, to stabilize and protect them from irreversible denaturation and extensive proteolysis during heat shock and oxidative stress. Aggregated proteins bound to the IbpAB complex are more efficiently refolded and reactivated by the ATP-dependent chaperone systems ClpB and DnaK/DnaJ/GrpE. Its activity is ATP-independent.


ensembl_gene_id: LFZ48_11020
symbol: dsdA
gene_biotype: protein_coding
description:
  D-serine dehydratase; Catalyzes the formation of pyruvate from serine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_11025
symbol: KSB63800.1
gene_biotype: protein_coding
description:
  DsdX permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_11030
symbol: gcvA_1
gene_biotype: protein_coding
description:
  Transcriptional regulator; Regulates the synthesis and expression of the dsdXA operon and dadA gene; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: LFZ48_11035
symbol: KSB63801.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 5 (cellulase A) family.


ensembl_gene_id: LFZ48_11040
symbol: emrD
gene_biotype: protein_coding
description:
  Multidrug efflux protein involved in adaptation to low energy shock; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_11055
symbol: tisB
gene_biotype: protein_coding
description:
  Toxic peptide TisB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_11060
symbol: ivbL
gene_biotype: protein_coding
description:
  Leader peptide IlvB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_11065
symbol: KSB63807.1
gene_biotype: protein_coding
description:
  Acetolactate synthase catalytic subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_11070
symbol: ilvN
gene_biotype: protein_coding
description:
  Acetolactate synthase 1 regulatory subunit; With IlvB catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_11080
symbol: rbsK-2
gene_biotype: protein_coding
description:
  Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.


ensembl_gene_id: LFZ48_11085
symbol: fucP
gene_biotype: protein_coding
description:
  Sugar:proton symporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_11090
symbol: KSB63812.1
gene_biotype: protein_coding
description:
  Deoxyribose mutarotase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_11095
symbol: KSB63813.1
gene_biotype: protein_coding
description:
  Response regulator in two-component regulatory system wtih UhpB; phosphorylated UhpA is a positive activator uhpT, a hexose phosphates transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_11100
symbol: KSB63814.1
gene_biotype: protein_coding
description:
  Histidine kinase; Member of the two-component regulatory system UhpB/UhpA involved in the regulation of the uptake of hexose ph; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_11105
symbol: KSB63815.1
gene_biotype: protein_coding
description:
  Transcriptional regulator; Membrane protein regulates uhpT expression; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_11110
symbol: uhpT
gene_biotype: protein_coding
description:
  Antiporter; Cytoplasmic membrane protein that functions as a monomer; catalyzes the active transport of sugar-phosphates such as glucose-6-phosphate with the obligatory exchange of inorganic phosphate or organophosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_11145
symbol: nepI
gene_biotype: protein_coding
description:
  Ribonucleoside transporter; Involved in the efflux of purine ribonucleosides, such as guanosine, adenosine and especially inosine. Involved in the resistance to 6-mercaptopurine; Belongs to the major facilitator superfamily. DHA1 family. NepI (TC 2.A.1.2.26) subfamily.


ensembl_gene_id: LFZ48_11165
symbol: KSB63826.1
gene_biotype: protein_coding
description:
  PTS fructose transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_11175
symbol: KSB63828.1
gene_biotype: protein_coding
description:
  PTS sorbose transporter subunit IIC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_11180
symbol: KSB63829.1
gene_biotype: protein_coding
description:
  PTS fructose transporter subunit IID; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_11185
symbol: dgaE
gene_biotype: protein_coding
description:
  Selenocysteine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_11190
symbol: KSB63831.1
gene_biotype: protein_coding
description:
  4-hydroxy-2-ketovalerate aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_11205
symbol: KSB63834.1
gene_biotype: protein_coding
description:
  Magnesium transport protein MgtC; Virulence factor required for growth in low Mg(2+) medium and for intramacrophage survival. May be involved in regulating membrane potential by activating Na(+)/K(+)-ATPase. Belongs to the MgtC/SapB family.


ensembl_gene_id: LFZ48_11235
symbol: KSB63840.1
gene_biotype: protein_coding
description:
  Autotransport protein MisL; Binds fibronectin; adhesin involved in intestinal colonization; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_11270
symbol: KSB63846.1
gene_biotype: protein_coding
description:
  Transporter; May be involved in the transport of galactosides-pentoses-hexuronides; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_11275
symbol: KSB63847.1
gene_biotype: protein_coding
description:
  Alpha-glucosidase; Catalyzes the transfer of alpha-xylosyl residue; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 31 family.


ensembl_gene_id: LFZ48_11285
symbol: KSB63849.1
gene_biotype: protein_coding
description:
  Xanthine permease XanP; High-affinity transporter for xanthine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_11290
symbol: gltS
gene_biotype: protein_coding
description:
  Sodium:glutamate symporter; Catalyzes the sodium-dependent transport of glutamate. Belongs to the glutamate:Na(+) symporter (ESS) (TC 2.A.27) family.


ensembl_gene_id: LFZ48_11295
symbol: recG
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.


ensembl_gene_id: LFZ48_11300
symbol: trmH
gene_biotype: protein_coding
description:
  tRNA guanosine-2'-O-methyltransferase; Catalyzes the 2'-O methylation of guanosine at position 18 in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: LFZ48_11310
symbol: rpoZ
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.


ensembl_gene_id: LFZ48_11320
symbol: ligB
gene_biotype: protein_coding
description:
  Aromatic ring-opening dioxygenase LigB; Catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. Belongs to the NAD-dependent DNA ligase family. LigB subfamily.


ensembl_gene_id: LFZ48_11330
symbol: KSB63858.1
gene_biotype: protein_coding
description:
  Zn-dependent hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_11345
symbol: rph
gene_biotype: protein_coding
description:
  Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation.


ensembl_gene_id: LFZ48_11350
symbol: pyrE
gene_biotype: protein_coding
description:
  Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).


ensembl_gene_id: LFZ48_11355
symbol: slmA
gene_biotype: protein_coding
description:
  Division inhibitor protein; Required for nucleoid occlusion (NO) phenomenon, which prevents Z-ring formation and cell division over the nucleoid. Acts as a DNA-associated cell division inhibitor that binds simultaneously chromosomal DNA and FtsZ, and disrupts the assembly of FtsZ polymers. SlmA-DNA-binding sequences (SBS) are dispersed on non-Ter regions of the chromosome, preventing FtsZ polymerization at these regions.


ensembl_gene_id: LFZ48_11360
symbol: dut
gene_biotype: protein_coding
description:
  Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family.


ensembl_gene_id: LFZ48_11365
symbol: coaBC
gene_biotype: protein_coding
description:
  Bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.


ensembl_gene_id: LFZ48_11370
symbol: radC
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0758 family. YicR subfamily.


ensembl_gene_id: LFZ48_11375
symbol: rpmB
gene_biotype: protein_coding
description:
  50S ribosomal protein L28; Required for 70S ribosome assembly; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL28 family.


ensembl_gene_id: LFZ48_11380
symbol: rpmG
gene_biotype: protein_coding
description:
  50S ribosomal protein L33; In Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_11385
symbol: mutM
gene_biotype: protein_coding
description:
  formamidopyrimidine-DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates.


ensembl_gene_id: LFZ48_11390
symbol: coaD
gene_biotype: protein_coding
description:
  Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.


ensembl_gene_id: LFZ48_11395
symbol: KSB63871.1
gene_biotype: protein_coding
description:
  3-deoxy-D-manno-octulosonic acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family.


ensembl_gene_id: LFZ48_11400
symbol: rfaQ
gene_biotype: protein_coding
description:
  Catalyzes the transfer of heptose(III) to heptose(II) in the lipopolysaccharide inner core; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_11405
symbol: KSB63873.1
gene_biotype: protein_coding
description:
  Glucosyltransferase I RfaG; Catalyzes the addition of the first glucose residue to the LPS core; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_11410
symbol: KSB63874.1
gene_biotype: protein_coding
description:
  Heptose kinase; Catalyzes the phosphorylation of heptose(I) of the outer membrane lipopolysaccharide core; Belongs to the protein kinase superfamily. KdkA/rfaP family.


ensembl_gene_id: LFZ48_11420
symbol: KSB63876.1
gene_biotype: protein_coding
description:
  UDP-D-galactose:(glucosyl)lipopolysaccharide-1, 6-D-galactosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_11425
symbol: KSB63877.1
gene_biotype: protein_coding
description:
  Lipopolysaccharide 1,3-galactosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_11430
symbol: rfaJ
gene_biotype: protein_coding
description:
  Lipopolysaccharide 1,2-glucosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_11435
symbol: KSB63879.1
gene_biotype: protein_coding
description:
  Heptose kinase; Catalyzes the phosphorylation of heptose(II) of the outer membrane lipopolysaccharide core; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_11440
symbol: waaZ
gene_biotype: protein_coding
description:
  Lipopolysaccharide core biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_11445
symbol: KSB63984.1
gene_biotype: protein_coding
description:
  Lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_11450
symbol: KSB63881.1
gene_biotype: protein_coding
description:
  O-antigen ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_11455
symbol: KSB63882.1
gene_biotype: protein_coding
description:
  ADP-heptose--LPS heptosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_11460
symbol: rfaF
gene_biotype: protein_coding
description:
  ADP-heptose--LPS heptosyltransferase; Catalyzes the transfer of the second heptose to the heptosyl-KDO2 moiety of the lipopolysaccharide inner core; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_11465
symbol: rfaD
gene_biotype: protein_coding
description:
  ADP-L-glycero-D-manno-heptose-6-epimerase; Catalyzes the interconversion between ADP-D-glycero-beta-D- manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose; Belongs to the NAD(P)-dependent epimerase/dehydratase family. HldD subfamily.


ensembl_gene_id: LFZ48_11470
symbol: kbl
gene_biotype: protein_coding
description:
  2-amino-3-ketobutyrate CoA ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA.


ensembl_gene_id: LFZ48_11475
symbol: tdh
gene_biotype: protein_coding
description:
  L-threonine 3-dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-threonine to 2- amino-3-ketobutyrate; Belongs to the zinc-containing alcohol dehydrogenase family.


ensembl_gene_id: LFZ48_11490
symbol: envC
gene_biotype: protein_coding
description:
  AmiB activator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_11505
symbol: grxC
gene_biotype: protein_coding
description:
  Glutaredoxin; Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins.


ensembl_gene_id: LFZ48_11510
symbol: secB
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecB; One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA.


ensembl_gene_id: LFZ48_11515
symbol: gpsA
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: LFZ48_11520
symbol: cysE
gene_biotype: protein_coding
description:
  Catalyzes the O-acetylation of serine; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the transferase hexapeptide repeat family.


ensembl_gene_id: LFZ48_11525
symbol: trmL
gene_biotype: protein_coding
description:
  rRNA methylase; Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S-adenosyl-L-methionine to the 2'-OH of the wobble nucleotide.


ensembl_gene_id: LFZ48_11530
symbol: lldD
gene_biotype: protein_coding
description:
  Lactate dehydrogenase; Catalyzes the conversion of L-lactate to pyruvate. Is coupled to the respiratory chain; Belongs to the FMN-dependent alpha-hydroxy acid dehydrogenase family.


ensembl_gene_id: LFZ48_11535
symbol: KSB63897.1
gene_biotype: protein_coding
description:
  Transcriptional regulator; Represses the lctPRD operon; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_11540
symbol: KSB63898.1
gene_biotype: protein_coding
description:
  L-lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.


ensembl_gene_id: LFZ48_11555
symbol: mtlR
gene_biotype: protein_coding
description:
  Mannitol repressor protein; Acts as a repressor of the mtlAD operon; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_11560
symbol: mtlD
gene_biotype: protein_coding
description:
  Mannitol-1-phosphate 5-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_11565
symbol: KSB63903.1
gene_biotype: protein_coding
description:
  PTS mannitol transporter subunit IICBA; Catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; subunit IIC forms the translocation channel and contains the specific substrate-binding site; subunit IIA is phosphorylated and transfers the phosphoryl group to the IIB subunit; subunit IIB transfers the phosphoryl group to the substrate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_11575
symbol: selA
gene_biotype: protein_coding
description:
  Selenocysteine synthase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis; Belongs to the SelA family.


ensembl_gene_id: LFZ48_11580
symbol: KSB63906.1
gene_biotype: protein_coding
description:
  selenocysteinyl-tRNA-specific translation factor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_11590
symbol: KSB63908.1
gene_biotype: protein_coding
description:
  Sugar kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_11595
symbol: KSB63909.1
gene_biotype: protein_coding
description:
  Catalyzes the oxidation of acetaldehyde, benzaldehyde, propionaldehyde and other aldehydes; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_11600
symbol: araD-3
gene_biotype: protein_coding
description:
  Catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_11605
symbol: KSB63911.1
gene_biotype: protein_coding
description:
  L-xylulose 5-phosphate 3-epimerase activity not yet demonstrated; may be involved in the utilization of 2,3-diketo-L-gulonate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_11610
symbol: sgbH
gene_biotype: protein_coding
description:
  Catalyzes the formation of L-xylulose-5-phosphate from 3-keto-L-gulonate-6-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_11615
symbol: KSB63912.1
gene_biotype: protein_coding
description:
  Xylulose kinase; Catalyzes the formation of L-xylulose 5-phosphate and 3-dehydro-L-gulonate 6-phosphate from L-xylulose or 3-dehydro-L-gulonate, respectively; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FGGY kinase family.


ensembl_gene_id: LFZ48_11620
symbol: KSB63913.1
gene_biotype: protein_coding
description:
  2-ketogluconate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_11635
symbol: dlgD
gene_biotype: protein_coding
description:
  2,3-diketo-L-gulonate reductase; Catalyzes the reduction of 2,3-diketo-L-gulonate in the presence of NADH, to form 3-keto-L-gulonate.


ensembl_gene_id: LFZ48_11645
symbol: KSB63918.1
gene_biotype: protein_coding
description:
  Electron transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_11650
symbol: avtA
gene_biotype: protein_coding
description:
  Valine--pyruvate aminotransferase; Transaminase C; catalyzes transamination of alanine, valine, and 2-aminobutyrate with their respective 2-keto acids; also catalyzes terminal step in valine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_11655
symbol: malS
gene_biotype: protein_coding
description:
  Alpha-amylase; Periplasmic enzyme that degrades maltodextrins that enter via the outer membrane porin LamB; hydrolyzes alpha-(1,4) glycosidic linkages; contains internal disulfide bonds; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_11665
symbol: KSB63922.1
gene_biotype: protein_coding
description:
  XylR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_11670
symbol: xylA
gene_biotype: protein_coding
description:
  Xylose isomerase; Catalyzes the interconversion of D-xylose to D-xylulose; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the xylose isomerase family.


ensembl_gene_id: LFZ48_11675
symbol: xylB
gene_biotype: protein_coding
description:
  Xylulose kinase; Catalyzes the formation of D-xylulose-5-phosphate fro D-xylulose; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_11690
symbol: wecH
gene_biotype: protein_coding
description:
  Acetyltransferase; Responsible for the incorporation of O-acetyl groups into the enterobacterial common antigen (ECA) trisaccharide repeat units.


ensembl_gene_id: LFZ48_11700
symbol: glyQ
gene_biotype: protein_coding
description:
  glycyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_11710
symbol: hokA
gene_biotype: protein_coding
description:
  Protein HokA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_11745
symbol: KSB63937.1
gene_biotype: protein_coding
description:
  Catalyzes the reduction of trimethylamine-N-oxide to form trimethylamine; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: LFZ48_11755
symbol: KSB63939.1
gene_biotype: protein_coding
description:
  3-methyladenine DNA glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_11765
symbol: KSB63941.1
gene_biotype: protein_coding
description:
  Catalyzes the addition of a phosphoethanolamine group to the outer Kdo residue of lipopolysaccharide; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_11775
symbol: KSB63942.1
gene_biotype: protein_coding
description:
  Ethanolamine ammonia-lyase; With EutC catalyzes the formation of acetaldehyde and ammonia from ethanolamine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_11780
symbol: eutC
gene_biotype: protein_coding
description:
  Ethanolamine ammonia-lyase; Catalyzes the formation of acetaldehyde from ethanolamine; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the EutC family.


ensembl_gene_id: LFZ48_11785
symbol: eutL
gene_biotype: protein_coding
description:
  Carboxysome structural protein involved in ethanolamine utilization; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_11790
symbol: KSB63945.1
gene_biotype: protein_coding
description:
  Ethanolamine utilization protein; involved in the degredation of ethanolamine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_11795
symbol: eutR
gene_biotype: protein_coding
description:
  Activates the transcription of the ethanolamine utilization operon; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_11800
symbol: hemF
gene_biotype: protein_coding
description:
  Coproporphyrinogen III oxidase; Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen- IX.


ensembl_gene_id: LFZ48_11810
symbol: ypeA
gene_biotype: protein_coding
description:
  Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the acetyltransferase family. YpeA subfamily.


ensembl_gene_id: LFZ48_11820
symbol: KSB63951.1
gene_biotype: protein_coding
description:
  RpoE-regulated lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_11825
symbol: KSB63952.1
gene_biotype: protein_coding
description:
  Peroxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_11830
symbol: ucpA
gene_biotype: protein_coding
description:
  Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_11835
symbol: cysP
gene_biotype: protein_coding
description:
  Thiosulfate transporter subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_11840
symbol: cysU
gene_biotype: protein_coding
description:
  Sulfate/thiosulfate transporter subunit; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: LFZ48_11845
symbol: cysW
gene_biotype: protein_coding
description:
  Part of the ABC transporter complex cysAWTP involved in sulfate/thiosulfate import; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_11850
symbol: cysA
gene_biotype: protein_coding
description:
  Sulfate/thiosulfate transporter subunit; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system.


ensembl_gene_id: LFZ48_11855
symbol: cysM
gene_biotype: protein_coding
description:
  Cysteine synthase; Catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cysteine synthase/cystathionine beta- synthase family.


ensembl_gene_id: LFZ48_11865
symbol: KSB63960.1
gene_biotype: protein_coding
description:
  Glutamine amidotransferase; Catalyzes the transfer of the ammonia group from glutamine to a new carbon-nitrogen group; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_11870
symbol: KSB63961.1
gene_biotype: protein_coding
description:
  Regulator of the ptsHI/crr operon; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_11875
symbol: pdxK
gene_biotype: protein_coding
description:
  Pyridoxal kinase; B6-vitamer kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxine (PN), pyridoxal (PL), and pyridoxamine (PM), forming their respective 5'-phosphorylated esters, i.e. PNP, PLP and PMP.


ensembl_gene_id: LFZ48_11885
symbol: crr
gene_biotype: protein_coding
description:
  PTS glucose transporter subunit IIA; Phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_11890
symbol: KSB63965.1
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate-protein phosphotransferase; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr).


ensembl_gene_id: LFZ48_11905
symbol: cysK
gene_biotype: protein_coding
description:
  Cysteine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cysteine synthase/cystathionine beta- synthase family.


ensembl_gene_id: LFZ48_11910
symbol: cysZ
gene_biotype: protein_coding
description:
  Sulfate transporter; High affinity, high specificity proton-dependent sulfate transporter, which mediates sulfate uptake. Provides the sulfur source for the cysteine synthesis pathway; Belongs to the CysZ family.


ensembl_gene_id: LFZ48_11915
symbol: zipA
gene_biotype: protein_coding
description:
  Cell division protein ZipA; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins.


ensembl_gene_id: LFZ48_11920
symbol: ligA
gene_biotype: protein_coding
description:
  Aromatic ring-opening dioxygenase LigA; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA; Belongs to the NAD-dependent DNA ligase family. LigA subfamily.


ensembl_gene_id: LFZ48_12010
symbol: recR
gene_biotype: protein_coding
description:
  Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.


ensembl_gene_id: LFZ48_12015
symbol: ybaB
gene_biotype: protein_coding
description:
  Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.


ensembl_gene_id: LFZ48_12020
symbol: dnaX
gene_biotype: protein_coding
description:
  DNA polymerase III subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: LFZ48_12025
symbol: apt
gene_biotype: protein_coding
description:
  Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.


ensembl_gene_id: LFZ48_12035
symbol: KSB62850.1
gene_biotype: protein_coding
description:
  PriC; protein involved in DNA replication; part of the primosome, a protein complex required to restart stalled replication forks; binds the complex formed by PriA, PriB and DNA; PriC-dependent primosome requires a gap to restart DNA replication; stimulates Rep activity at stalled forks; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_12065
symbol: acrA
gene_biotype: protein_coding
description:
  Multidrug transporter; With AcrD and TolC forms a transport system involved in resistance to a number of compounds including lipophilic antibiotics; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: LFZ48_12075
symbol: tomB
gene_biotype: protein_coding
description:
  Hha toxicity attenuator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_12080
symbol: hha
gene_biotype: protein_coding
description:
  With Hns involved in transcriptional regulation of hemolysin; non-specific DNA-binding protein which affects the production of multiple proteins; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_12085
symbol: KSB62858.1
gene_biotype: protein_coding
description:
  Maltose acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_12095
symbol: rpmJ
gene_biotype: protein_coding
description:
  50S ribosomal protein L36; Smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group do not have the motif; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_12100
symbol: rpmE2
gene_biotype: protein_coding
description:
  50S ribosomal protein L31; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_12110
symbol: KSB62863.1
gene_biotype: protein_coding
description:
  Cysteine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_12125
symbol: KSB62866.1
gene_biotype: protein_coding
description:
  Ammonium transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_12130
symbol: glnK
gene_biotype: protein_coding
description:
  Transcriptional regulator; Indirectly regulates nitrogen metabolism; at high nitrogen levels P-II prevents the phosphorylation of NR-I, the transcriptional activator of the glutamine synthetase gene (glnA); at low nitrogen levels P-II is uridylylated to form PII-UMP and interacts with an adenylyltransferase (GlnE) that activates GlnA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_12150
symbol: KSB62871.1
gene_biotype: protein_coding
description:
  Cysteine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_12155
symbol: cof
gene_biotype: protein_coding
description:
  Thiamin pyrimidine pyrophosphate hydrolase; Catalyzes the hydrolysis of 4-amino-2-methyl-5- hydroxymethylpyrimidine pyrophosphate (HMP-PP) to 4-amino-2-methyl-5- hydroxymethylpyrimidine phosphate (HMP-P).


ensembl_gene_id: LFZ48_12165
symbol: queC
gene_biotype: protein_coding
description:
  Queuosine biosynthesis protein QueC; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Belongs to the QueC family.


ensembl_gene_id: LFZ48_12170
symbol: fadM
gene_biotype: protein_coding
description:
  Thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_12180
symbol: KSB62877.1
gene_biotype: protein_coding
description:
  Molecular chaperone; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_12185
symbol: hupB
gene_biotype: protein_coding
description:
  DNA-binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.


ensembl_gene_id: LFZ48_12190
symbol: lon
gene_biotype: protein_coding
description:
  DNA-binding protein; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.


ensembl_gene_id: LFZ48_12195
symbol: clpX
gene_biotype: protein_coding
description:
  Clp protease ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.


ensembl_gene_id: LFZ48_12200
symbol: clpP
gene_biotype: protein_coding
description:
  Hypothetical protein; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: LFZ48_12205
symbol: tig
gene_biotype: protein_coding
description:
  Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.


ensembl_gene_id: LFZ48_12210
symbol: bolA
gene_biotype: protein_coding
description:
  Positive transcriptional regulator of morphogenetic pathway; controlling several genes involved in oxidative stress, acid stress, heat shock, osmotic shock, and carbon-starvation stress; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the BolA/IbaG family.


ensembl_gene_id: LFZ48_12220
symbol: ampG
gene_biotype: protein_coding
description:
  Muropeptide transporter; In Escherichia coli this protein is a permease involved in peptidoglycan recycling; member of major facilitator superfamily; MFS; inner membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_12225
symbol: KSB62885.1
gene_biotype: protein_coding
description:
  Cytochrome o ubiquinol oxidase subunit II; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_12230
symbol: KSB62886.1
gene_biotype: protein_coding
description:
  Cytochrome o ubiquinol oxidase subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heme-copper respiratory oxidase family.


ensembl_gene_id: LFZ48_12235
symbol: cyoC
gene_biotype: protein_coding
description:
  Cytochrome o ubiquinol oxidase subunit III; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_12240
symbol: cyoD
gene_biotype: protein_coding
description:
  Cytochrome o ubiquinol oxidase subunit IV; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_12245
symbol: cyoE
gene_biotype: protein_coding
description:
  Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.


ensembl_gene_id: LFZ48_12260
symbol: yajQ
gene_biotype: protein_coding
description:
  Nucleotide-binding protein; Nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ; the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0234 family.


ensembl_gene_id: LFZ48_12265
symbol: KSB62893.1
gene_biotype: protein_coding
description:
  2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.


ensembl_gene_id: LFZ48_12270
symbol: yajL
gene_biotype: protein_coding
description:
  Oxidative-stress-resistance chaperone; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_12290
symbol: KSB62897.1
gene_biotype: protein_coding
description:
  IclR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_12295
symbol: thiI
gene_biotype: protein_coding
description:
  tRNA s(4)U8 sulfurtransferase; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS.


ensembl_gene_id: LFZ48_12300
symbol: xseB
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.


ensembl_gene_id: LFZ48_12305
symbol: KSB62900.1
gene_biotype: protein_coding
description:
  Geranyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FPP/GGPP synthase family.


ensembl_gene_id: LFZ48_12310
symbol: dxs
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.


ensembl_gene_id: LFZ48_12320
symbol: KSB62903.1
gene_biotype: protein_coding
description:
  Phosphatidylglycerophosphatase; Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG).


ensembl_gene_id: LFZ48_12325
symbol: thiL
gene_biotype: protein_coding
description:
  Thiamine monophosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family.


ensembl_gene_id: LFZ48_12330
symbol: nusB
gene_biotype: protein_coding
description:
  Transcription antiterminator NusB; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.


ensembl_gene_id: LFZ48_12335
symbol: ribH
gene_biotype: protein_coding
description:
  6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin; Belongs to the DMRL synthase family.


ensembl_gene_id: LFZ48_12340
symbol: ribD
gene_biotype: protein_coding
description:
  5-amino-6-(5-phosphoribosylamino)uracil reductase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.


ensembl_gene_id: LFZ48_12345
symbol: nrdR
gene_biotype: protein_coding
description:
  NrdR family transcriptional regulator; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family.


ensembl_gene_id: LFZ48_12355
symbol: KSB62910.1
gene_biotype: protein_coding
description:
  Ion channel protein Tsx; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_12365
symbol: secF
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: LFZ48_12370
symbol: secD
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: LFZ48_12375
symbol: yajC
gene_biotype: protein_coding
description:
  Preprotein translocase subunit YajC; The SecYEG-SecDF-YajC-YidC holo-translocon (HTL) protein secretase/insertase is a supercomplex required for protein secretion, insertion of proteins into membranes, and assembly of membrane protein complexes. While the SecYEG complex is essential for assembly of a number of proteins and complexes, the SecDF-YajC-YidC subcomplex facilitates these functions.


ensembl_gene_id: LFZ48_12380
symbol: tgt
gene_biotype: protein_coding
description:
  Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form t [...]


ensembl_gene_id: LFZ48_12385
symbol: queA
gene_biotype: protein_coding
description:
  S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).


ensembl_gene_id: LFZ48_12390
symbol: acpH
gene_biotype: protein_coding
description:
  ACP phosphodiesterase; Converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine prosthetic group from ACP; Belongs to the AcpH family.


ensembl_gene_id: LFZ48_12395
symbol: KSB62918.1
gene_biotype: protein_coding
description:
  Peroxiredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_12400
symbol: KSB62919.1
gene_biotype: protein_coding
description:
  Maltodextrin glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 13 family.


ensembl_gene_id: LFZ48_12405
symbol: proY
gene_biotype: protein_coding
description:
  Cryptic permease that may be involved in the transport of proline across the inner membrane; in Salmonella typhimurium, the proY gene is silent unless overexpressed on a multicopy plasmid or activated by a proZ mutation; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_12410
symbol: KSB62920.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid ABC transporter substrate-binding protein; Component of the transport system for branched-chain amino acids.


ensembl_gene_id: LFZ48_12415
symbol: phoR
gene_biotype: protein_coding
description:
  Phosphate regulon sensor protein; Membrane-associated histidine protein kinase that phosphorylates phoB in response to environmental signals as part of the two-component phosphate regulatory system phoR/phoB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_12420
symbol: phoB
gene_biotype: protein_coding
description:
  Transcriptional regulator PhoB; Two component response regulator for the phosphate regulon; PhoR phosphorylates PhoB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_12430
symbol: sbcD
gene_biotype: protein_coding
description:
  Exonuclease SbcD; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family.


ensembl_gene_id: LFZ48_12435
symbol: sbcC
gene_biotype: protein_coding
description:
  Exonuclease SbcC; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SMC family. SbcC subfamily.


ensembl_gene_id: LFZ48_12455
symbol: KSB62927.1
gene_biotype: protein_coding
description:
  Long polar fimbrial protein LpfA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_12460
symbol: KSB62928.1
gene_biotype: protein_coding
description:
  MFS transporter; Member of the major facilitator superfamily (MFS) of transporters; unknown function; may be associated with transport or processing of arabinose polymers; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_12465
symbol: KSB62929.1
gene_biotype: protein_coding
description:
  Fructokinase; Catalyzes phosphorylation of fructose; cytosolic enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_12475
symbol: ppnP
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions.


ensembl_gene_id: LFZ48_12480
symbol: KSB62932.1
gene_biotype: protein_coding
description:
  AroM protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_12490
symbol: aroL
gene_biotype: protein_coding
description:
  Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate.


ensembl_gene_id: LFZ48_12495
symbol: yaiI
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0178 family.


ensembl_gene_id: LFZ48_12500
symbol: proC
gene_biotype: protein_coding
description:
  Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.


ensembl_gene_id: LFZ48_12505
symbol: adrA
gene_biotype: protein_coding
description:
  Diguanylate cyclase; Catalyzes the conversion of 2 GTP into c-di-GMP; adrA overexpression induces cellulose biosynthesis, cell adherence to abiotic surfaces and swimming and swarming motility; AdrA acts post-transcriptionally on the bcsABZC operon activating cellulose biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_12515
symbol: iraP
gene_biotype: protein_coding
description:
  anti-RssB factor; Inhibits RpoS proteolysis by regulating RssB activity, thereby increasing the stability of the sigma stress factor RpoS especially during phosphate and magnesium starvation, but also in stationary phase and during nitrogen starvation. Its effect on RpoS stability is due to its interaction with RssB, which probably blocks the interaction of RssB with RpoS, and the consequent delivery of the RssB-RpoS complex to the ClpXP protein degradation pathway.


ensembl_gene_id: LFZ48_12520
symbol: KSB62940.1
gene_biotype: protein_coding
description:
  Multidrug transporter; Confers resistance to fosfomycin and deoxycholate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_12525
symbol: KSB62941.1
gene_biotype: protein_coding
description:
  Extensin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_12550
symbol: sbmA
gene_biotype: protein_coding
description:
  Microcin B17 transporter; In Escherichia coli SbmA is involved in uptake of microcin J25; functions along with FhuA, TonB, and ExbB/D in this capacity; in Sinorhizobium meliloti, BacA is essential and required for symbiosis; defects appear to affect the cell envelope; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_12555
symbol: ampH
gene_biotype: protein_coding
description:
  This protein has no known enzymatic function; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_12570
symbol: KSB62950.1
gene_biotype: protein_coding
description:
  Delta-aminolevulinic acid dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ALAD family.


ensembl_gene_id: LFZ48_12575
symbol: prpE
gene_biotype: protein_coding
description:
  Catalyzes the formation of propionyl-CoA using propionate as a substrate; PrpE from Ralstonia solanacearum can produce acetyl-, propionyl-, butyryl- and acrylyl-coenzyme A, and Salmonella enterica produces propionyl- and butyryl-coenzyme A; not expressed in Escherichia coli when grown on propionate/minimal media; ATP-dependent; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_12580
symbol: prpD
gene_biotype: protein_coding
description:
  2-methylcitrate dehydratase; Functions in propionate metabolism; involved in isomerization of (2S,3S)-methylcitrate to (2R,3S)-methylisocitrate; also encodes minor aconitase or dehydratase activity; aconitase C; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_12585
symbol: prpC
gene_biotype: protein_coding
description:
  Catalyzes the synthesis of 2-methylcitrate from propionyl-CoA and oxaloacetate; also catalyzes the condensation of oxaloacetate with acetyl-CoA but with a lower specificity; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_12590
symbol: prpB
gene_biotype: protein_coding
description:
  2-methylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. Belongs to the isocitrate lyase/PEP mutase superfamily. Methylisocitrate lyase family.


ensembl_gene_id: LFZ48_12595
symbol: KSB62955.1
gene_biotype: protein_coding
description:
  Transcriptional regulator; Sigma-54 dependent activator family protein; activates the prpBCDE operon; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_12610
symbol: foxA
gene_biotype: protein_coding
description:
  Ferrioxamine B receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_12625
symbol: cydB
gene_biotype: protein_coding
description:
  Ubiquinol oxidase subunit II; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_12630
symbol: KSB62961.1
gene_biotype: protein_coding
description:
  Cytochrome D ubiquinol oxidase subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_12640
symbol: KSB62963.1
gene_biotype: protein_coding
description:
  Type III restriction endonuclease subunit R; Cleaves DNA 25 basepairs downstream from the recognition site; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_12660
symbol: KSB62966.1
gene_biotype: protein_coding
description:
  Heavy metal transport/detoxification protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_12675
symbol: KSB62969.1
gene_biotype: protein_coding
description:
  Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: LFZ48_12700
symbol: KSB62973.1
gene_biotype: protein_coding
description:
  Response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_12720
symbol: KSB63112.1
gene_biotype: protein_coding
description:
  Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_12740
symbol: KSB62980.1
gene_biotype: protein_coding
description:
  Fimbrial chaperone protein StbB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_12775
symbol: glk-2
gene_biotype: protein_coding
description:
  Glucokinase; Catalyzes the conversion of ATP and D-glucose to ADP and D-glucose 6-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_12800
symbol: KSB62990.1
gene_biotype: protein_coding
description:
  Disulfide bond formation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_12805
symbol: KSB63114.1
gene_biotype: protein_coding
description:
  Type III effector phosphothreonine lyase; SpvC; OpsF from Shigella was shown to remove phosphate from threonine groups; may inactivate mitogen activated kinases during infection; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_12965
symbol: KSB63015.1
gene_biotype: protein_coding
description:
  Terminase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_12970
symbol: KSB63016.1
gene_biotype: protein_coding
description:
  Terminase small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_13005
symbol: KSB63023.1
gene_biotype: protein_coding
description:
  Antirepressor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_13015
symbol: KSB63024.1
gene_biotype: protein_coding
description:
  Antiterminator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_13020
symbol: KSB63025.1
gene_biotype: protein_coding
description:
  DNA breaking-rejoining protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_13025
symbol: KSB63026.1
gene_biotype: protein_coding
description:
  Protein ninG; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_13075
symbol: KSB63036.1
gene_biotype: protein_coding
description:
  DNA replication protein DnaC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_13085
symbol: KSB63038.1
gene_biotype: protein_coding
description:
  Repressor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_13110
symbol: KSB63043.1
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_13115
symbol: KSB63044.1
gene_biotype: protein_coding
description:
  Enterohemolysin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_13135
symbol: proA
gene_biotype: protein_coding
description:
  Gamma-glutamyl phosphate reductase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.


ensembl_gene_id: LFZ48_13140
symbol: proB
gene_biotype: protein_coding
description:
  Gamma-glutamyl kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.


ensembl_gene_id: LFZ48_13150
symbol: crl
gene_biotype: protein_coding
description:
  Transcriptional regulator; Binds to the sigma-S subunit of RNA polymerase, activating expression of sigma-S-regulated genes. Stimulates RNA polymerase holoenzyme formation and may bind to several other sigma factors, such as sigma-70 and sigma-32; Belongs to the Crl family.


ensembl_gene_id: LFZ48_13160
symbol: gpt
gene_biotype: protein_coding
description:
  Xanthine-guanine phosphoribosyltransferase; Acts on guanine, xanthine and to a lesser extent hypoxanthine; Belongs to the purine/pyrimidine phosphoribosyltransferase family. XGPT subfamily.


ensembl_gene_id: LFZ48_13165
symbol: KSB63053.1
gene_biotype: protein_coding
description:
  Aminoacyl-histidine dipeptidase; Catalyzes the hydrolysis of Xaa-His dipeptides; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_13170
symbol: prfH
gene_biotype: protein_coding
description:
  Peptide chain release factor-like protein; Similar to release factor 1 and 2; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_13175
symbol: KSB63055.1
gene_biotype: protein_coding
description:
  Peptide chain release factor H; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_13180
symbol: dinB
gene_biotype: protein_coding
description:
  DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.


ensembl_gene_id: LFZ48_13185
symbol: KSB63057.1
gene_biotype: protein_coding
description:
  Transpeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_13190
symbol: KSB63058.1
gene_biotype: protein_coding
description:
  Glutamine amidotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_13195
symbol: gmhA
gene_biotype: protein_coding
description:
  Phosphoheptose isomerase; Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate.


ensembl_gene_id: LFZ48_13200
symbol: fadE
gene_biotype: protein_coding
description:
  acyl-CoA dehydrogenase; Functions in fatty acid oxidation; converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_13205
symbol: KSB63061.1
gene_biotype: protein_coding
description:
  Carbon-nitrogen hydrolase; NAD(P)-binding; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_13220
symbol: pagN
gene_biotype: protein_coding
description:
  Adhesin; Mediates invasion via interaction with proteoglycan; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_13375
symbol: tagH
gene_biotype: protein_coding
description:
  Type VI secretion system protein ImpI; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_13395
symbol: clpV
gene_biotype: protein_coding
description:
  Clp protease ClpV; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ClpA/ClpB family.


ensembl_gene_id: LFZ48_13410
symbol: icmF
gene_biotype: protein_coding
description:
  Type VI secretion protein IcmF; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_13460
symbol: dnaQ
gene_biotype: protein_coding
description:
  DNA polymerase III subunit epsilon; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease.


ensembl_gene_id: LFZ48_13475
symbol: gloB
gene_biotype: protein_coding
description:
  Hydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid.


ensembl_gene_id: LFZ48_13480
symbol: mltD
gene_biotype: protein_coding
description:
  Lytic murein transglycosylase; Catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues; may play a role in recycling muropeptides during cell division and/or cell elongation; in Helicobacter pylori MltD is a endolytic transglycosylase involved mainly in the rearrangement of the peptidoglycan layer of the bacterial cell wall; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_13525
symbol: adk
gene_biotype: protein_coding
description:
  Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.


ensembl_gene_id: LFZ48_13535
symbol: aes
gene_biotype: protein_coding
description:
  Acetyl esterase; Displays esterase activity towards short chain fatty esters (acyl chain length of up to 8 carbons). Able to hydrolyze triacetylglycerol (triacetin) and tributyrylglycerol (tributyrin), but not trioleylglycerol (triolein) or cholesterol oleate. Negatively regulates MalT activity by antagonizing maltotriose binding. Inhibits MelA galactosidase activity.


ensembl_gene_id: LFZ48_13540
symbol: gsk
gene_biotype: protein_coding
description:
  Guanosine kinase; Catalyzes the formation of inosine/guanosine monophosphate from inosine or guanosine and ATP; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_13545
symbol: KSB61251.1
gene_biotype: protein_coding
description:
  Cation:proton antiport protein; YbaL; member of the CPA-2 family of antiporters; uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.


ensembl_gene_id: LFZ48_13550
symbol: KSB61252.1
gene_biotype: protein_coding
description:
  Fosmidomycin resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_13555
symbol: ushA
gene_biotype: protein_coding
description:
  5'-nucleotidase; Catalyzes the degradation of periplasmic UDP-glucose to uridine, glucose-1-phosphate and inorganic phosphate; specific for uridine nucleotides; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 5'-nucleotidase family.


ensembl_gene_id: LFZ48_13560
symbol: ybaK
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily.


ensembl_gene_id: LFZ48_13570
symbol: copA
gene_biotype: protein_coding
description:
  Copper-transporting ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_13575
symbol: KSB61256.1
gene_biotype: protein_coding
description:
  Transcriptional regulator; Activator of copper-responsive regulon genes; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_13630
symbol: KSB61267.1
gene_biotype: protein_coding
description:
  Methionine ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_13635
symbol: sfbB
gene_biotype: protein_coding
description:
  Methionine ABC transporter ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.


ensembl_gene_id: LFZ48_13640
symbol: metP
gene_biotype: protein_coding
description:
  Methionine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_13645
symbol: selU
gene_biotype: protein_coding
description:
  tRNA 2-selenouridine synthase; Involved in the post-transcriptional modification of the uridine at the wobble position (U34) of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Catalyzes the conversion of 2-thiouridine (S2U-RNA) to 2- selenouridine (Se2U-RNA). Acts in a two-step process involving geranylation of 2-thiouridine (S2U) to S-geranyl-2-thiouridine (geS2U) and subsequent selenation of the latter derivative to 2-selenouridine (Se2U) in the tRNA chain.


ensembl_gene_id: LFZ48_13650
symbol: purK
gene_biotype: protein_coding
description:
  Phosphoribosylaminoimidazole carboxylase; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR).


ensembl_gene_id: LFZ48_13660
symbol: lpxH
gene_biotype: protein_coding
description:
  UDP-2,3-diacylglucosamine hydrolase; Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: LFZ48_13670
symbol: cysS
gene_biotype: protein_coding
description:
  cysteine--tRNA ligase; Catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: LFZ48_13680
symbol: ybcJ
gene_biotype: protein_coding
description:
  Ribosome-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_13685
symbol: folD
gene_biotype: protein_coding
description:
  Methenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.


ensembl_gene_id: LFZ48_13690
symbol: fimA
gene_biotype: protein_coding
description:
  Type-1 fimbrial protein subunit A; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_13695
symbol: fimI
gene_biotype: protein_coding
description:
  Fimbrial protein FimI; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_13700
symbol: KSB61335.1
gene_biotype: protein_coding
description:
  Fimbrial chaperone protein FimC; Involved in type 1 fimbriae biosynthesis, interacts with FimH; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_13710
symbol: fimH
gene_biotype: protein_coding
description:
  Adhesin; Involved in the regulation of fimbriae length and mediates adhesion of type 1 fimbriae; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_13715
symbol: fimF
gene_biotype: protein_coding
description:
  Adhesin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_13720
symbol: KSB61283.1
gene_biotype: protein_coding
description:
  Fimbriae Z protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_13725
symbol: fimY
gene_biotype: protein_coding
description:
  Fimbriae Y protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_13735
symbol: KSB61286.1
gene_biotype: protein_coding
description:
  Transcriptional regulator; Regulates type 1 fimbriae expression; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_13745
symbol: KSB61287.1
gene_biotype: protein_coding
description:
  Copper-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_13755
symbol: KSB61289.1
gene_biotype: protein_coding
description:
  Response regulator in two-component regulatory system with CusS; regulates the copper efflux system; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_13760
symbol: KSB61336.1
gene_biotype: protein_coding
description:
  Copper transporter; With CusA, CusB and CusF is part of a cation efflux system that mediates resistance to copper and silver; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_13770
symbol: KSB61291.1
gene_biotype: protein_coding
description:
  Copper resistance protein; With CusA, CusC and CusF is part of a cation efflux system that mediates resistance to copper and silver; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: LFZ48_13775
symbol: KSB61292.1
gene_biotype: protein_coding
description:
  Cation transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: LFZ48_13785
symbol: KSB61294.1
gene_biotype: protein_coding
description:
  Pyridine nucleotide-disulfide oxidoreductase; Involved in disulfide oxidoreductase activity and electron transport; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_13810
symbol: mscM
gene_biotype: protein_coding
description:
  Miniconductance mechanosensitive channel; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_13840
symbol: KSB61305.1
gene_biotype: protein_coding
description:
  PTS mannose transporter subunit IICD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_13845
symbol: KSB61306.1
gene_biotype: protein_coding
description:
  PTS mannose transporter subunit IIAB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_13855
symbol: KSB61308.1
gene_biotype: protein_coding
description:
  Dihydropteridine reductase; Catalyzes the reduction of nitroaromatic compounds such as nitrofurazone, quinones and the anti-tumor agent CB1954; NAD(P)H-dependent; oxygen insensitive; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_13880
symbol: KSB61313.1
gene_biotype: protein_coding
description:
  Gamma-glutamyl ligase; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity.


ensembl_gene_id: LFZ48_13885
symbol: KSB61314.1
gene_biotype: protein_coding
description:
  Phosphopantetheinyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the P-Pant transferase superfamily.


ensembl_gene_id: LFZ48_13890
symbol: KSB61315.1
gene_biotype: protein_coding
description:
  Fep; Cbt; Cbr; FeuB; FepA; PfeA; IroN; BfeA; outer membrane receptor of ferric enterobactin and colicins B and D; interacts with the TonB-ExbBD complex which catalyzes the translocation of the siderophore to the periplasmic space; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_13895
symbol: KSB61316.1
gene_biotype: protein_coding
description:
  Enterobactin esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_13905
symbol: entF
gene_biotype: protein_coding
description:
  Enterobactin synthase subunit F; With EntB, EntD, and EntE forms the multienzyme complex enterobactin synthase; EntF is the serine activating enzyme which catalyzes the formation of the amide and ester bonds of the cyclic enterobactin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_13910
symbol: KSB61319.1
gene_biotype: protein_coding
description:
  O-antigen chain length regulator; In Salmonella is responsible for long O-antigen polymerization; may be part of the ferric enterobactin transport system; necessary for enetrobactin uptake; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_13915
symbol: KSB61320.1
gene_biotype: protein_coding
description:
  Iron-enterobactin transporter ATP-binding protein; With FepBDE is involved in the transport of ferric enterobactin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_13920
symbol: KSB61321.1
gene_biotype: protein_coding
description:
  Iron-enterobactin transporter permease; With FepBCD is involved in the transport of ferric enterobactin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: LFZ48_13925
symbol: KSB61322.1
gene_biotype: protein_coding
description:
  Iron-enterobactin transporter; With FepBCG is involved in the transport of ferric enterobactin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: LFZ48_13930
symbol: entS
gene_biotype: protein_coding
description:
  Enterobactin transporter; Component of an export pathway for enterobactin. Belongs to the major facilitator superfamily. EntS (TC 2.A.1.38) family.


ensembl_gene_id: LFZ48_13935
symbol: KSB61324.1
gene_biotype: protein_coding
description:
  Iron-enterobactin ABC transporter substrate-binding protein; With FepCDG is involved in the transport of ferric enterobactin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_13940
symbol: KSB61325.1
gene_biotype: protein_coding
description:
  Isochorismate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_13945
symbol: entE
gene_biotype: protein_coding
description:
  Enterobactin synthase subunit E; Bifunctional 2,3-dihydroxybenzoate-AMP ligase/S-dihydroxybenzoyltransferase; activates the carboxylate group of 2,3-dihydroxy-benzoate forming (2,3-dihydroxybenzoyl)adenylate then catalyzes the acylation of holo-entB with 2,3-dihydroxy-benzoate adenylate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_13950
symbol: KSB61327.1
gene_biotype: protein_coding
description:
  Isochorismatase; 2,3 dihydro-2,3 dihydroxybenzoate synthase; catalyzes the formation of 2,3 dihydro-2,3 dihydroxybenzoate and pyruvate from isochorismate; with Ent DEF is involved in enterobactin synthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_13955
symbol: KSB61328.1
gene_biotype: protein_coding
description:
  2,3-dihydroxybenzoate-2,3-dehydrogenase; Catalyzes the formation of 2,3-dihydroxybenzoate from 2,3-dihydro-2,3-dihydroxybenzoate; involved in the biosynthesis of siderophores, enterobactin, bacillibactin or vibriobactin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_13960
symbol: entH
gene_biotype: protein_coding
description:
  Thioesterase; Required for optimal enterobactin synthesis. Acts as a proofreading enzyme that prevents EntB misacylation by hydrolyzing the thioester bound existing between EntB and wrongly charged molecules. Belongs to the thioesterase PaaI family.


ensembl_gene_id: LFZ48_13975
symbol: KSB61332.1
gene_biotype: protein_coding
description:
  Oxidoreductase; Member of the iron-containing alcohol dehydrogenase family; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_13980
symbol: KSB61333.1
gene_biotype: protein_coding
description:
  Methionine aminotransferase; Catalyzes the transfer of an amino moiety; preference for methionine followed by histidine and phenylalanine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_14000
symbol: KSB60547.1
gene_biotype: protein_coding
description:
  Type III secretory protein EscF; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_14015
symbol: KSB60549.1
gene_biotype: protein_coding
description:
  Secretion protein EspD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_14020
symbol: KSB60550.1
gene_biotype: protein_coding
description:
  Secretion protein EspA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_14025
symbol: KSB60551.1
gene_biotype: protein_coding
description:
  Type III secretion system protein SepL; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_14030
symbol: KSB60552.1
gene_biotype: protein_coding
description:
  Type III secretory protein EscD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_14035
symbol: KSB60553.1
gene_biotype: protein_coding
description:
  Intimin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_14040
symbol: KSB60554.1
gene_biotype: protein_coding
description:
  Tir chaperone; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_14075
symbol: KSB60560.1
gene_biotype: protein_coding
description:
  Type III secretion system protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_14080
symbol: KSB60561.1
gene_biotype: protein_coding
description:
  Type III secretory protein EscS; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_14090
symbol: KSB60563.1
gene_biotype: protein_coding
description:
  Secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_14100
symbol: KSB60565.1
gene_biotype: protein_coding
description:
  Negative regulator GrlR; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_14105
symbol: KSB60566.1
gene_biotype: protein_coding
description:
  GrlA, global regulator of LEE activator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_14115
symbol: ssaC
gene_biotype: protein_coding
description:
  Outer membrane secretin SsaC; Salmonella pathogenicity island 2 protein; member of a type III secretion system involved in the survival and replication of Salmonella in a host cell; levels of SsaC increase in conditions of acidic pH; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_14125
symbol: KSB60570.1
gene_biotype: protein_coding
description:
  Type III secretory protein EscJ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_14130
symbol: KSB60745.1
gene_biotype: protein_coding
description:
  Type III secretion apparatus protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_14140
symbol: KSB60572.1
gene_biotype: protein_coding
description:
  T3SS regulator Mpc; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_14185
symbol: KSB60748.1
gene_biotype: protein_coding
description:
  LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_14195
symbol: KSB60580.1
gene_biotype: protein_coding
description:
  APC family amino acid permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_14205
symbol: KSB60582.1
gene_biotype: protein_coding
description:
  FAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_14210
symbol: KSB60583.1
gene_biotype: protein_coding
description:
  Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: LFZ48_14215
symbol: iraD
gene_biotype: protein_coding
description:
  DNA recombination protein; Inhibits RpoS proteolysis by regulating RssB activity, thereby increasing the stability of the sigma stress factor RpoS during oxidative stress. Its effect on RpoS stability is due to its interaction with RssB, which probably blocks the interaction of RssB with RpoS, and the consequent delivery of the RssB-RpoS complex to the ClpXP protein degradation pathway.


ensembl_gene_id: LFZ48_14220
symbol: hcp-2
gene_biotype: protein_coding
description:
  Type VI secretion effector protein (Hcp); Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_14225
symbol: KSB60585.1
gene_biotype: protein_coding
description:
  Xylanase deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_14235
symbol: exuT_3
gene_biotype: protein_coding
description:
  Involved in the transport of aldohexuronates; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_14255
symbol: uxaC
gene_biotype: protein_coding
description:
  Glucuronate isomerase; Catalyzes the interconversion of D-glucuronate to D-fructuronate or D-galacturonate to D-tagaturonate; functions in glucuronic and galacturonic metabolism; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_14265
symbol: KSB60592.1
gene_biotype: protein_coding
description:
  Catalyzes the formation of glutathionylspermidine from glutathione and spermidine; also catalyzes the reverse reaction; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_14270
symbol: KSB60593.1
gene_biotype: protein_coding
description:
  S-transferase; YghU; B2989; one of eight putative glutathione transferase proteins from E. coli; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_14275
symbol: KSB60594.1
gene_biotype: protein_coding
description:
  Molybdenum ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_14285
symbol: hybG
gene_biotype: protein_coding
description:
  Hydrogenase 2 accessory protein HypG; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_14290
symbol: hypA
gene_biotype: protein_coding
description:
  Hydrogenase nickel incorporation protein; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.


ensembl_gene_id: LFZ48_14295
symbol: hybE
gene_biotype: protein_coding
description:
  Hydrogenase 2-specific chaperone; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_14300
symbol: hybD
gene_biotype: protein_coding
description:
  Hydrogenase 2 maturation endopeptidase; Protease responsible for the cleavage of a 15 amino acid peptide from the C-terminal end of the large subunit of hydrogenase 2 (HybC); Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_14305
symbol: KSB60600.1
gene_biotype: protein_coding
description:
  Hydrogenase 2 large subunit; Involved in hydrogen uptake; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.


ensembl_gene_id: LFZ48_14310
symbol: KSB60601.1
gene_biotype: protein_coding
description:
  HybB; cytochrome b subunit of the hydrogenase 2 enzyme, composed of HybA, B, C, and O subunits; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_14315
symbol: KSB60602.1
gene_biotype: protein_coding
description:
  Hydrogenase 2 protein HybA; Fe-S ferrodoxin type component; participates in the periplasmic electron-transferring activity of hydrogenase 2; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_14320
symbol: hyb0
gene_biotype: protein_coding
description:
  Hydrogenase 2 small subunit; Involved in hydrogen uptake; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_14340
symbol: KSB60607.1
gene_biotype: protein_coding
description:
  RNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_14360
symbol: exbD
gene_biotype: protein_coding
description:
  Biopolymer transporter ExbD; Membrane spanning protein in TonB-ExbB-ExbD complex; involved in the tonB-independent energy-dependent transport iron-siderophore complexes and vitamin B12 into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_14365
symbol: exbB
gene_biotype: protein_coding
description:
  Biopolymer transporter ExbB; Membrane spanning protein in TonB-ExbB-ExbD complex; involved in the tonB-independent energy-dependent transport iron-siderophore complexes and vitamin B12 into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_14375
symbol: KSB60614.1
gene_biotype: protein_coding
description:
  Cystathionine beta-lyase; Catalyzes the formation of L-homocysteine from cystathionine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_14390
symbol: yqhD
gene_biotype: protein_coding
description:
  Aldehyde reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_14395
symbol: dkgA
gene_biotype: protein_coding
description:
  2,5-diketo-D-gluconic acid reductase; Methylglyoxal reductase/beta-keto ester reductase; catalyzes the reduction of 2,5-diketo-D-gluconic acid to 2-keto-L-gulonic acid; also catalyzes the reduction of methylglyoxal, ethyl-2-methylacetoacetate and ethyl-acetoacetate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_14400
symbol: KSB60618.1
gene_biotype: protein_coding
description:
  2-oxoglutarate translocator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_14405
symbol: hit
gene_biotype: protein_coding
description:
  Diadenosine tetraphosphate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_14410
symbol: ygiQ
gene_biotype: protein_coding
description:
  YgiQ family radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_14415
symbol: ftsP
gene_biotype: protein_coding
description:
  Cell division protein FtsI; Cell division protein that is required for growth during stress conditions. May be involved in protecting or stabilizing the divisomal assembly under conditions of stress; Belongs to the FtsP family.


ensembl_gene_id: LFZ48_14420
symbol: plsC
gene_biotype: protein_coding
description:
  Catalyzes the formation of 1,2-diacyl-sn-glycerol 3-phosphate from 1-acyl-sn-glycerol 3-phosphate using either acyl-CoA or acyl-ACP; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.


ensembl_gene_id: LFZ48_14425
symbol: parC
gene_biotype: protein_coding
description:
  DNA topoisomerase IV; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase GyrA/ParC subunit family. ParC type 1 subfamily.


ensembl_gene_id: LFZ48_14435
symbol: KSB60625.1
gene_biotype: protein_coding
description:
  Response regulator in two-component regulatory system with QseC; regulates FlhCD which is the master regulator for flagella and motility genes; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_14440
symbol: KSB60626.1
gene_biotype: protein_coding
description:
  Sensor protein QseC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_14445
symbol: mdaB
gene_biotype: protein_coding
description:
  NADPH quinone reductase MdaB; Involved in drug resistance; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_14450
symbol: ygiN
gene_biotype: protein_coding
description:
  Quinol monooxygenase; Catalyzes the oxidation of menadiol to menadione; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_14455
symbol: parE
gene_biotype: protein_coding
description:
  DNA topoisomerase IV; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 1 subfamily.


ensembl_gene_id: LFZ48_14460
symbol: yqiA
gene_biotype: protein_coding
description:
  Esterase; Displays esterase activity toward palmitoyl-CoA and pNP-butyrate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_14465
symbol: cpdA
gene_biotype: protein_coding
description:
  Diguanylate phosphodiesterase; Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes.


ensembl_gene_id: LFZ48_14475
symbol: nudF
gene_biotype: protein_coding
description:
  ADP-sugar pyrophosphatase; catalyzes the formation of D-ribose 5-phosphate from ADP-ribose; can also act on ADP-mannose and ADP-glucose; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_14485
symbol: ygiB
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0441 family.


ensembl_gene_id: LFZ48_14495
symbol: KSB60637.1
gene_biotype: protein_coding
description:
  Dioxygenase; Seems to be involved in biofilm formation; in asymptomatic bacteriuria E. coli strains 83972 and VR50, the ygiD gene is upregulated during biofilm formation in urine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_14500
symbol: zupT
gene_biotype: protein_coding
description:
  Zinc transporter ZupT; Mediates zinc uptake. May also transport other divalent cations; Belongs to the ZIP transporter (TC 2.A.5) family. ZupT subfamily.


ensembl_gene_id: LFZ48_14515
symbol: dsbL
gene_biotype: protein_coding
description:
  Thiol:disulfide interchange protein; Involved in disulfide-bond formation. Acts by transferring its disulfide bond to other proteins. Part of a redox system composed of DsbI and DsbL that mediates formation of an essential disulfide bond in AssT.


ensembl_gene_id: LFZ48_14520
symbol: dsbI
gene_biotype: protein_coding
description:
  Disulfide oxidoreductase; Required for disulfide bond formation in some proteins. Part of a redox system composed of DsbI and DsbL that mediates formation of an essential disulfide bond in AssT.


ensembl_gene_id: LFZ48_14545
symbol: ribB
gene_biotype: protein_coding
description:
  3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate.


ensembl_gene_id: LFZ48_14555
symbol: glgS
gene_biotype: protein_coding
description:
  Glycogen synthase; Major determinant of cell surface composition. Negatively regulates motility, adhesion and synthesis of biofilm exopolysaccharides.


ensembl_gene_id: LFZ48_14570
symbol: hldE
gene_biotype: protein_coding
description:
  Heptose 1-phosphate adenyltransferase; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose. In the N-terminal section; belongs to the carbohydrate kinase PfkB family.


ensembl_gene_id: LFZ48_14575
symbol: glnE
gene_biotype: protein_coding
description:
  Bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase; Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of [...]


ensembl_gene_id: LFZ48_14590
symbol: cca
gene_biotype: protein_coding
description:
  tRNA nucleotidyl transferase; Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. Also shows phosphatase, 2'-nucleotidase and 2',3'-cyclic phosphodiesterase activities. These phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases.


ensembl_gene_id: LFZ48_14595
symbol: uppP
gene_biotype: protein_coding
description:
  UDP pyrophosphate phosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.


ensembl_gene_id: LFZ48_14600
symbol: folB
gene_biotype: protein_coding
description:
  Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.


ensembl_gene_id: LFZ48_14605
symbol: plsY
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate acyltransferase; Catalyzes the transfer of an acyl group from acyl-ACP to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme can also utilize acyl-CoA as fatty acyl donor, but not acyl- PO(4); Belongs to the PlsY family.


ensembl_gene_id: LFZ48_14615
symbol: KSB60661.1
gene_biotype: protein_coding
description:
  Involved in the tartrate degradation pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_14620
symbol: ttdB
gene_biotype: protein_coding
description:
  Tartrate dehydratase subunit beta; Involved in the tartrate degradation pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_14630
symbol: tsaD
gene_biotype: protein_coding
description:
  UGMP family protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.


ensembl_gene_id: LFZ48_14635
symbol: rpsU
gene_biotype: protein_coding
description:
  30S ribosomal protein S21; A small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bS21 family.


ensembl_gene_id: LFZ48_14640
symbol: dnaG
gene_biotype: protein_coding
description:
  DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.


ensembl_gene_id: LFZ48_14645
symbol: rpoD
gene_biotype: protein_coding
description:
  RNA polymerase subunit sigma; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.


ensembl_gene_id: LFZ48_14650
symbol: mug
gene_biotype: protein_coding
description:
  formamidopyrimidine-DNA glycosylase; Excises ethenocytosine and uracil, which can arise by alkylation or deamination of cytosine, respectively, from the corresponding mispairs with guanine in ds-DNA. It is capable of hydrolyzing the carbon-nitrogen bond between the sugar-phosphate backbone of the DNA and the mispaired base. The complementary strand guanine functions in substrate recognition. Required for DNA damage lesion repair in stationary-phase cells; Belongs to the uracil-DNA glycosylase (UDG) superfamily. TDG/mug family.


ensembl_gene_id: LFZ48_14755
symbol: KSB60687.1
gene_biotype: protein_coding
description:
  Head completion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_14770
symbol: KSB60690.1
gene_biotype: protein_coding
description:
  Phage capsid protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_14775
symbol: KSB60691.1
gene_biotype: protein_coding
description:
  Terminase; gpP; P protein; capsid packaging; P protein is probably the ATPase subunit of the terminase complex, which directs cos cleavage of closed monomeric dsDNA circles into linear genomes with 19 nt cohesive ssDNA ends; Q, P and M proteins are needed to package DNA into capsid proheads and conversion into mature capsids; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_14780
symbol: KSB60692.1
gene_biotype: protein_coding
description:
  Phage portal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_14800
symbol: KSB60695.1
gene_biotype: protein_coding
description:
  Adenine methylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_14830
symbol: KSB60700.1
gene_biotype: protein_coding
description:
  Regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_14850
symbol: KSB60704.1
gene_biotype: protein_coding
description:
  FMN reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_14865
symbol: KSB60707.1
gene_biotype: protein_coding
description:
  Aerotaxis receptor Aer; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_14875
symbol: ygjG
gene_biotype: protein_coding
description:
  Putrescine--2-oxoglutarate aminotransferase; Catalyzes the aminotransferase reaction from putrescine to 2- oxoglutarate, leading to glutamate and 4-aminobutanal, which spontaneously cyclizes to form 1-pyrroline. This is the first step in one of two pathways for putrescine degradation, where putrescine is converted into 4-aminobutanoate (gamma-aminobutyrate or GABA) via 4- aminobutanal. Also functions as a cadaverine transaminase in a a L- lysine degradation pathway to succinate that proceeds via cadaverine, glutarate and L-2-hydroxyglutarate.


ensembl_gene_id: LFZ48_14880
symbol: KSB60710.1
gene_biotype: protein_coding
description:
  methionyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_14890
symbol: ebgC
gene_biotype: protein_coding
description:
  beta-D-galactosidase; In Escherichia coli this is the second beta-galactosidase system; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_14895
symbol: KSB60713.1
gene_biotype: protein_coding
description:
  Beta-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_14910
symbol: KSB60715.1
gene_biotype: protein_coding
description:
  Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_14915
symbol: KSB60716.1
gene_biotype: protein_coding
description:
  2,4-dienoyl-CoA reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_14925
symbol: KSB60718.1
gene_biotype: protein_coding
description:
  Metal-dependent hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_14930
symbol: KSB60719.1
gene_biotype: protein_coding
description:
  SanA protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_14950
symbol: KSB60721.1
gene_biotype: protein_coding
description:
  Altronate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_14975
symbol: mzrA
gene_biotype: protein_coding
description:
  EnvZ/OmpR regulon moderator; Modulates the activity of the EnvZ/OmpR two-component regulatory system, probably by directly modulating EnvZ enzymatic activity and increasing stability of phosphorylated OmpR.


ensembl_gene_id: LFZ48_15005
symbol: KSB60731.1
gene_biotype: protein_coding
description:
  Glutathionyl-hydroquinone reductase YqjG; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_15020
symbol: KSB60734.1
gene_biotype: protein_coding
description:
  Pirin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pirin family.


ensembl_gene_id: LFZ48_15030
symbol: yhaM
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0597 family.


ensembl_gene_id: LFZ48_15055
symbol: tdcC
gene_biotype: protein_coding
description:
  Septum site-determining protein; Involved in the import of threonine and serine into the cell, with the concomitant import of a proton (symport system). Belongs to the amino acid/polyamine transporter 2 family. SdaC/TdcC subfamily.


ensembl_gene_id: LFZ48_15060
symbol: KSB60742.1
gene_biotype: protein_coding
description:
  Threonine dehydratase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA.


ensembl_gene_id: LFZ48_15065
symbol: tdcA
gene_biotype: protein_coding
description:
  Transcriptional regulator; Regulates the tdcABCDEFG operon which is involved in amino acid degradation; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: LFZ48_15085
symbol: ghrA
gene_biotype: protein_coding
description:
  Bifunctional glyoxylate/hydroxypyruvate reductase A; Catalyzes the NADPH-dependent reduction of glyoxylate and hydroxypyruvate into glycolate and glycerate, respectively.


ensembl_gene_id: LFZ48_15090
symbol: ycdX
gene_biotype: protein_coding
description:
  Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the PHP family.


ensembl_gene_id: LFZ48_15105
symbol: csgG
gene_biotype: protein_coding
description:
  Curli production assembly/transport protein CsgG; Involved in the stability of the curlin proteins during assembly; involved in the secretion of the major curlin subunit CsgA across the outer membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_15110
symbol: csgF
gene_biotype: protein_coding
description:
  Curli assembly protein CsgF; Nucleator protein that participates in the polymerization of curlin (CsgA) subunits into curli (extracellular fibers from Escherichia and Salmonella spp. that are involved in the colonization of inert surfaces and biofilm formation); part of the curli secretion and assembly protein complex; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_15115
symbol: KSB60055.1
gene_biotype: protein_coding
description:
  Curli assembly protein CsgE; Chaperone-like protein that participates in the polymerization of curlin (CsgA) subunits into curli (extracellular fibers from Escherichia and Salmonella spp. that are involved in the colonization of inert surfaces and biofilm formation); part of the curli secretion and assembly protein complex; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_15120
symbol: csgD
gene_biotype: protein_coding
description:
  Transcriptional regulator; Activates the csgBA and csgDEFG operons involved in biofilm formation; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_15125
symbol: csgB
gene_biotype: protein_coding
description:
  Curlin minor subunit CsgB; CsgB; functions as a nucleator in the assembly of curli (coiled surface structures) on the cell surface; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_15135
symbol: csgC
gene_biotype: protein_coding
description:
  Curli assembly protein CsgC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_15145
symbol: ymdB
gene_biotype: protein_coding
description:
  RNase III inhibitor; Deacetylates O-acetyl-ADP ribose to yield ADP-ribose and free acetate. Down-regulates ribonuclease 3 (RNase III) activity. Acts by interacting directly with the region of the ribonuclease that is required for dimerization/activation; Belongs to the YmdB family.


ensembl_gene_id: LFZ48_15150
symbol: clsC
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the synthesis of cardiolipin (CL) (diphosphatidylglycerol) from phosphatidylglycerol (PG) and phosphatidylethanolamine (PE); Belongs to the phospholipase D family. Cardiolipin synthase subfamily. ClsC sub-subfamily.


ensembl_gene_id: LFZ48_15155
symbol: opgC
gene_biotype: protein_coding
description:
  Glucans biosynthesis protein; Necessary for the succinyl substitution of periplasmic glucans. Could catalyze the transfer of succinyl residues from the cytoplasmic side of the membrane to the nascent glucan backbones on the periplasmic side of the membrane.


ensembl_gene_id: LFZ48_15160
symbol: mdoG
gene_biotype: protein_coding
description:
  Glucan biosynthesis protein G; Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs).


ensembl_gene_id: LFZ48_15175
symbol: KSB60067.1
gene_biotype: protein_coding
description:
  secY/secA suppressor protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_15185
symbol: lpxL
gene_biotype: protein_coding
description:
  Lipid A biosynthesis lauroyl acyltransferase; Catalyzes the transfer of laurate from lauroyl-acyl carrier protein (ACP) to Kdo(2)-lipid IV(A) to form Kdo(2)-(lauroyl)-lipid IV(A).


ensembl_gene_id: LFZ48_15190
symbol: yceA
gene_biotype: protein_coding
description:
  Sulfurtransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0176 family.


ensembl_gene_id: LFZ48_15210
symbol: solA
gene_biotype: protein_coding
description:
  N-methyltryptophan oxidase; Catalyzes the oxidative demethylation of N-methyl-L- tryptophan; Belongs to the MSOX/MTOX family. MTOX subfamily.


ensembl_gene_id: LFZ48_15235
symbol: grxB
gene_biotype: protein_coding
description:
  Glutaredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_15240
symbol: mdtH
gene_biotype: protein_coding
description:
  Multidrug resistance protein MdtH; Confers resistance to norfloxacin and enoxacin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_15245
symbol: rimJ
gene_biotype: protein_coding
description:
  Ribosomal-protein-alanine acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_15250
symbol: yceH
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0502 family.


ensembl_gene_id: LFZ48_15255
symbol: KSB60083.1
gene_biotype: protein_coding
description:
  Virulence factor MviM; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_15260
symbol: mviN
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.


ensembl_gene_id: LFZ48_15265
symbol: flgN
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlgN; Export chaperone for FlgK and FlgL; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_15270
symbol: flgM
gene_biotype: protein_coding
description:
  Negative regulator of flagellin synthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_15275
symbol: flgA
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlgA; Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P- ring assembly; Belongs to the FlgA family.


ensembl_gene_id: LFZ48_15280
symbol: flgB
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.


ensembl_gene_id: LFZ48_15285
symbol: flgC
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlgC; With FlgF and B makes up the proximal portion of the flagellar basal body rod; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_15290
symbol: flgD
gene_biotype: protein_coding
description:
  Flagellar basal body rod modification protein; Required for flagellar hook formation. May act as a scaffolding protein.


ensembl_gene_id: LFZ48_15295
symbol: flgE
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlgE; The hook connects flagellar basal body to the flagellar filament; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_15300
symbol: flgF
gene_biotype: protein_coding
description:
  FlgF, with FlgB and C, makes up the proximal portion of the flagellar basal body rod; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_15305
symbol: flgG
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlgG; Makes up the distal portion of the flagellar basal body rod; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_15310
symbol: flgH
gene_biotype: protein_coding
description:
  Flagellar basal body L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.


ensembl_gene_id: LFZ48_15315
symbol: flgI
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlgA; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.


ensembl_gene_id: LFZ48_15320
symbol: flgJ
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlgJ; Flagellum-specific muramidase which hydrolyzes the peptidoglycan layer to assemble the rod structure in the periplasmic space; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_15325
symbol: flgK
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlgK; With FlgL acts as a hook filament junction protein to join the flagellar filament to the hook; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_15330
symbol: flgL
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlgL; With FlgK acts as a hook filament junction protein to join the flagellar filament to the hook; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of this and other flagellar genes; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_15335
symbol: rne
gene_biotype: protein_coding
description:
  Ribonuclease E; Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs. Belongs to the RNase E/G family. RNase E subfamily.


ensembl_gene_id: LFZ48_15350
symbol: KSB60101.1
gene_biotype: protein_coding
description:
  Septum formation inhibitor Maf; Nucleoside triphosphate pyrophosphatase that hydrolyzes 7- methyl-GTP (m(7)GTP). May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids; Belongs to the Maf family. YceF subfamily.


ensembl_gene_id: LFZ48_15360
symbol: rpmF
gene_biotype: protein_coding
description:
  Some L32 proteins have zinc finger motifs consisting of CXXC while others do not; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL32 family.


ensembl_gene_id: LFZ48_15365
symbol: plsX
gene_biotype: protein_coding
description:
  Phosphate acyltransferase; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.


ensembl_gene_id: LFZ48_15370
symbol: fabH
gene_biotype: protein_coding
description:
  3-oxoacyl-ACP synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.


ensembl_gene_id: LFZ48_15375
symbol: fabD
gene_biotype: protein_coding
description:
  Malonyl CoA-ACP transacylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_15380
symbol: fabG
gene_biotype: protein_coding
description:
  3-ketoacyl-ACP reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: LFZ48_15390
symbol: KSB60109.1
gene_biotype: protein_coding
description:
  3-oxoacyl-ACP synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.


ensembl_gene_id: LFZ48_15415
symbol: KSB60113.1
gene_biotype: protein_coding
description:
  Long polar fimbrial chaperone LpfB; Binds with fimbrial subunit LpfA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_15425
symbol: KSB60115.1
gene_biotype: protein_coding
description:
  4-amino-4-deoxychorismate lyase; Catalyzes the formation of 4-aminobenzoate and pyruvate from 4-amino-4-deoxychorismate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_15430
symbol: mltG
gene_biotype: protein_coding
description:
  Aminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation.


ensembl_gene_id: LFZ48_15435
symbol: tmk
gene_biotype: protein_coding
description:
  Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.


ensembl_gene_id: LFZ48_15440
symbol: KSB60118.1
gene_biotype: protein_coding
description:
  DNA polymerase III subunit delta; Catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_15450
symbol: KSB60120.1
gene_biotype: protein_coding
description:
  PTS glucose-specific subunit IIBC; Phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_15455
symbol: KSB60121.1
gene_biotype: protein_coding
description:
  Ferric-rhodotorulic acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_15460
symbol: KSB60176.1
gene_biotype: protein_coding
description:
  Purine nucleoside phosphoramidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_15470
symbol: lpoB
gene_biotype: protein_coding
description:
  Penicillin-binding protein; Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1B (PBP1b). Belongs to the LpoB family.


ensembl_gene_id: LFZ48_15480
symbol: nagZ
gene_biotype: protein_coding
description:
  Beta-hexosaminidase; Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide- linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N- acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides. Belongs to the glycosyl hydrolase 3 family. NagZ subfamily.


ensembl_gene_id: LFZ48_15485
symbol: ycfP
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0227 family.


ensembl_gene_id: LFZ48_15490
symbol: ndh
gene_biotype: protein_coding
description:
  NADH dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_15505
symbol: bhsA_2
gene_biotype: protein_coding
description:
  Multiple stress resistance protein BhsA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_15510
symbol: KSB60131.1
gene_biotype: protein_coding
description:
  Peptigoglycan-binding protein LysM; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_15515
symbol: mfd
gene_biotype: protein_coding
description:
  Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.


ensembl_gene_id: LFZ48_15520
symbol: KSB60133.1
gene_biotype: protein_coding
description:
  Outer membrane-specific lipoprotein transporter subunit LolC; Part of the ATP-dependent transport system LolCDE; responsible for the localization of lipoproteins to the periplasmic surface of the outer membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_15525
symbol: lolD
gene_biotype: protein_coding
description:
  Lipoprotein ABC transporter ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner.


ensembl_gene_id: LFZ48_15530
symbol: lolE
gene_biotype: protein_coding
description:
  Outer membrane-specific lipoprotein transporter subunit LolE; Part of the ATP-dependent transport system LolCDE; responsible for the localization of lipoproteins to the periplasmic surface of the outer membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_15535
symbol: nagK
gene_biotype: protein_coding
description:
  N-acetylglucosamine kinase; Catalyzes the phosphorylation of N-acetyl-D-glucosamine (GlcNAc) derived from cell-wall degradation, yielding GlcNAc-6-P.


ensembl_gene_id: LFZ48_15540
symbol: cobB
gene_biotype: protein_coding
description:
  NAD-dependent deacetylase; Modulates the activities of several enzymes which are inactive in their acetylated form; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sirtuin family. Class III subfamily.


ensembl_gene_id: LFZ48_15550
symbol: potC
gene_biotype: protein_coding
description:
  Spermidine/putrescine ABC transporter permease; Can transport spermidine and putrescine but affinity is higher for spermidine; forms a complex of PotA2BCD; PotC is a membrane component; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_15555
symbol: sifA
gene_biotype: protein_coding
description:
  Effector protein SifA; Translocated by the type III secretion system SPI-2; required for the formation of lysosomal glycoprotein structures (Sifs); required for maintenance of membrane in the Salmonella-containing vacuole; a cysteine residue with CAAX motif is modified by isoprenoid addition of protein geranylgeranyl transferase I; also modified by S-acylation; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_15560
symbol: potB
gene_biotype: protein_coding
description:
  Spermidine/putrescine ABC transporter permease; Can transport spermidine and putrescine but affinity is higher for spermidine; forms a complex of PotA2BCD; PotB is a membrane component; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_15565
symbol: potA
gene_biotype: protein_coding
description:
  Putrescine/spermidine ABC transporter ATPase; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.


ensembl_gene_id: LFZ48_15570
symbol: pepT
gene_biotype: protein_coding
description:
  Peptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family.


ensembl_gene_id: LFZ48_15580
symbol: KSB60145.1
gene_biotype: protein_coding
description:
  50S ribosomal protein L16 arginine hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_15585
symbol: phoQ
gene_biotype: protein_coding
description:
  Sensor protein PhoQ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_15590
symbol: phoP
gene_biotype: protein_coding
description:
  Response regulator in two-component regulatory system with PhoQ; involved in magnesium starvation and stress; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_15595
symbol: purB
gene_biotype: protein_coding
description:
  Adenylosuccinate lyase; Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.


ensembl_gene_id: LFZ48_15600
symbol: hflD
gene_biotype: protein_coding
description:
  Lysogenization regulator; HflD; UPF0274; in Escherichia coli this protein is peripherally associated with the membrane and appears to act with lambda CII protein; in Haemophilus influenzae a knockout of the HI0638 gene affected paracytosis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_15605
symbol: mnmA
gene_biotype: protein_coding
description:
  tRNA 2-thiouridylase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA(Lys), tRNA(Glu) and tRNA(Gln), leading to the formation of s(2)U34, the first step of tRNA-mnm(5)s(2)U34 synthesis. Sulfur is provided by IscS, via a sulfur-relay system. Binds ATP and its substrate tRNAs; Belongs to the MnmA/TRMU family.


ensembl_gene_id: LFZ48_15610
symbol: nudJ
gene_biotype: protein_coding
description:
  Phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Nudix hydrolase family. NudJ subfamily.


ensembl_gene_id: LFZ48_15620
symbol: rluE
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pseudouridine synthase RsuA family.


ensembl_gene_id: LFZ48_15625
symbol: KSB60152.1
gene_biotype: protein_coding
description:
  Converts isocitrate to alpha ketoglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_15645
symbol: KSB60156.1
gene_biotype: protein_coding
description:
  Lipoprotein bor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_15650
symbol: KSB60157.1
gene_biotype: protein_coding
description:
  Inhibitor of g-type lysozyme; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_15660
symbol: KSB60159.1
gene_biotype: protein_coding
description:
  Autotransporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_15670
symbol: KSB60161.1
gene_biotype: protein_coding
description:
  Lipoprotein EnvE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_15715
symbol: KSB60166.1
gene_biotype: protein_coding
description:
  PliC; periplasmic lysozyme inhibitor of c-type lysozyme; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_15740
symbol: KSB60169.1
gene_biotype: protein_coding
description:
  Heat-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the small heat shock protein (HSP20) family.


ensembl_gene_id: LFZ48_15775
symbol: priA
gene_biotype: protein_coding
description:
  Primosome assembly protein PriA; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.


ensembl_gene_id: LFZ48_15785
symbol: ftsN
gene_biotype: protein_coding
description:
  Cell division protein FtsN; Essential cell division protein that activates septal peptidoglycan synthesis and constriction of the cell. Acts on both sides of the membrane, via interaction with FtsA in the cytoplasm and interaction with the FtsQBL complex in the periplasm. These interactions may induce a conformational switch in both FtsA and FtsQBL, leading to septal peptidoglycan synthesis by FtsI and associated synthases.


ensembl_gene_id: LFZ48_15790
symbol: hslV
gene_biotype: protein_coding
description:
  Hypothetical protein; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery. Belongs to the peptidase T1B family. HslV subfamily.


ensembl_gene_id: LFZ48_15795
symbol: hslU
gene_biotype: protein_coding
description:
  ATP-dependent protease ATP-binding subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis.


ensembl_gene_id: LFZ48_15800
symbol: menA
gene_biotype: protein_coding
description:
  1,4-dihydroxy-2-naphthoate octaprenyltransferase; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily.


ensembl_gene_id: LFZ48_15805
symbol: rraA
gene_biotype: protein_coding
description:
  Ribonuclease activity regulator protein RraA; Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by altering the composition of the degradosome. Modulates RNA-binding and helicase activities of the degradosome.


ensembl_gene_id: LFZ48_15810
symbol: zapB
gene_biotype: protein_coding
description:
  Septal ring assembly protein ZapB; Non-essential, abundant cell division factor that is required for proper Z-ring formation. It is recruited early to the divisome by direct interaction with FtsZ, stimulating Z-ring assembly and thereby promoting cell division earlier in the cell cycle. Its recruitment to the Z-ring requires functional FtsA or ZipA.


ensembl_gene_id: LFZ48_15815
symbol: KSB59877.1
gene_biotype: protein_coding
description:
  Glycerol uptake facilitator GlpF; Involved in the transport of glycerol into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MIP/aquaporin (TC 1.A.8) family.


ensembl_gene_id: LFZ48_15820
symbol: glpK
gene_biotype: protein_coding
description:
  Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.


ensembl_gene_id: LFZ48_15830
symbol: KSB59880.1
gene_biotype: protein_coding
description:
  ferredoxin-NADP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_15845
symbol: tpiA
gene_biotype: protein_coding
description:
  Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.


ensembl_gene_id: LFZ48_15860
symbol: ushB
gene_biotype: protein_coding
description:
  CDP-diacylglycerol pyrophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_15865
symbol: KSB59887.1
gene_biotype: protein_coding
description:
  Sulfate transporter subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_15870
symbol: pfkA
gene_biotype: protein_coding
description:
  6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.


ensembl_gene_id: LFZ48_15880
symbol: cpxP
gene_biotype: protein_coding
description:
  Repressor of the Cpx envelope stress response pathway which occurs via periplasmic interactions with CpxA; CpxP is degraded by DegP protease especially in the presence of misfolded substrates; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_15885
symbol: cpxR
gene_biotype: protein_coding
description:
  Response regulator in two-component regulatory system with CpxA; part of the envelope stress response system; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_15890
symbol: cpxA
gene_biotype: protein_coding
description:
  Two-component sensor protein; Part of two-component CpxA/CpxR system; senses envelope stress; upregulates a number of periplasmic folding and trafficking factors; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_15895
symbol: KSB59893.1
gene_biotype: protein_coding
description:
  6-N-hydroxylaminopurine resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_15910
symbol: KSB59896.1
gene_biotype: protein_coding
description:
  ATP-independent transporter subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_15930
symbol: rhaT
gene_biotype: protein_coding
description:
  Rhamnose:proton symporter; Uptake of L-rhamnose across the boundary membrane with the concomitant transport of protons into the cell (symport system). Belongs to the L-rhamnose transporter (TC 2.A.7.6) family.


ensembl_gene_id: LFZ48_15945
symbol: rhaB
gene_biotype: protein_coding
description:
  Rhamnulokinase; Involved in the catabolism of L-rhamnose (6-deoxy-L-mannose). Catalyzes the transfer of the gamma-phosphate group from ATP to the 1- hydroxyl group of L-rhamnulose to yield L-rhamnulose 1-phosphate. Belongs to the rhamnulokinase family.


ensembl_gene_id: LFZ48_15950
symbol: rhaA
gene_biotype: protein_coding
description:
  Sugar isomerase; Catalyzes the formation of L-rhamnulose from L-rhamnose; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_15955
symbol: rhaD
gene_biotype: protein_coding
description:
  Rhamnulose-1-phosphate aldolase; Catalyzes the reversible cleavage of L-rhamnulose-1-phosphate to dihydroxyacetone phosphate (DHAP) and L-lactaldehyde. Belongs to the aldolase class II family. RhaD subfamily.


ensembl_gene_id: LFZ48_15975
symbol: KSB59908.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_15980
symbol: KSB59909.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid transport; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_15995
symbol: fdhD
gene_biotype: protein_coding
description:
  Formate dehydrogenase; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.


ensembl_gene_id: LFZ48_16050
symbol: KSB59921.1
gene_biotype: protein_coding
description:
  Toxin HigB-2; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_16065
symbol: dtd
gene_biotype: protein_coding
description:
  D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family.


ensembl_gene_id: LFZ48_16075
symbol: yihX
gene_biotype: protein_coding
description:
  alpha-D-glucose-1-phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_16085
symbol: KSB59928.1
gene_biotype: protein_coding
description:
  Sugar kinase; Phosphorylates 6-deoxy-6-sulfo-D-fructose (SF) to 6-deoxy-6- sulfo-D-fructose 1-phosphate (SFP); Belongs to the carbohydrate kinase PfkB family.


ensembl_gene_id: LFZ48_16090
symbol: yihU
gene_biotype: protein_coding
description:
  Hypothetical protein; Reduces 3-sulfolactaldehyde (SLA) to 2,3-dihydroxypropane 1- sulfonate (DHPS); Belongs to the HIBADH-related family. 3-sulfolactaldehyde reductase subfamily.


ensembl_gene_id: LFZ48_16095
symbol: KSB59930.1
gene_biotype: protein_coding
description:
  Aldolase; Cleaves 6-deoxy-6-sulfo-D-fructose 1-phosphate (SFP) to form dihydroxyacetone phosphate (DHAP) and 3-sulfolactaldehyde (SLA). Belongs to the aldolase LacD family.


ensembl_gene_id: LFZ48_16100
symbol: yihS
gene_biotype: protein_coding
description:
  Sugar isomerase; Catalyzes the isomerization of sulfoquinovose (SQ) to 6- deoxy-6-sulfo-D-fructose (SF).


ensembl_gene_id: LFZ48_16105
symbol: KSB59932.1
gene_biotype: protein_coding
description:
  Aldose epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_16110
symbol: KSB59933.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 31 family.


ensembl_gene_id: LFZ48_16125
symbol: ompL
gene_biotype: protein_coding
description:
  Porin involved in the transport of small molecular weight solutes (up to 600 Daltons) across the cell wall; specific substrate still unknown; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_16145
symbol: KSB59939.1
gene_biotype: protein_coding
description:
  Coproporphyrinogen III oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_16160
symbol: typA
gene_biotype: protein_coding
description:
  GTP-binding protein TypA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_16165
symbol: glnA
gene_biotype: protein_coding
description:
  Forms a homododecamer; forms glutamine from ammonia and glutamate with the conversion of ATP to ADP and phosphate; also functions in the assimilation of ammonia; highly regulated protein controlled by the addition/removal of adenylyl groups by adenylyltransferase from specific tyrosine residues; addition of adenylyl groups results in inactivation of the enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_16170
symbol: glnL
gene_biotype: protein_coding
description:
  Nitrogen regulation protein NR(II); Sensory histidine kinase in two-component regulatory system with GlnG; acts as a signal transducer which responds to the nitrogen level of cell and modulates the activity of ntrC by phosphorylation/dephosphorylation; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_16175
symbol: glnG
gene_biotype: protein_coding
description:
  Nitrogen regulation protein NR(I); Member of the two-component regulatory system NtrB/NtrC, which controls expression of the nitrogen-regulated (ntr) genes in response to nitrogen limitation. Phosphorylated NtrC binds directly to DNA and stimulates the formation of open promoter-sigma54-RNA polymerase complexes.


ensembl_gene_id: LFZ48_16180
symbol: hemN
gene_biotype: protein_coding
description:
  Coproporphyrinogen III oxidase; Catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: LFZ48_16185
symbol: yihI
gene_biotype: protein_coding
description:
  GTPase activator; A GTPase-activating protein (GAP) that modifies Der/EngA GTPase function. May play a role in ribosome biogenesis. Belongs to the YihI family.


ensembl_gene_id: LFZ48_16195
symbol: engB
gene_biotype: protein_coding
description:
  GTP-binding protein; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.


ensembl_gene_id: LFZ48_16200
symbol: polA
gene_biotype: protein_coding
description:
  DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.


ensembl_gene_id: LFZ48_16215
symbol: KSB59952.1
gene_biotype: protein_coding
description:
  Protein disulfide isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_16220
symbol: srkA
gene_biotype: protein_coding
description:
  Serine/threonine protein kinase; A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response.


ensembl_gene_id: LFZ48_16230
symbol: mobA
gene_biotype: protein_coding
description:
  Molybdopterin-guanine dinucleotide biosynthesis protein MobA; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor; Belongs to the MobA family.


ensembl_gene_id: LFZ48_16235
symbol: KSB59956.1
gene_biotype: protein_coding
description:
  Molybdopterin-guanine dinucleotide biosynthesis protein B; In Escherichia coli the MobB protein is not essential but has been found to interact with multiple proteins involved in the molybdopterin guanine dinucleotide cofactor biosynthesis pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_16275
symbol: hdfR
gene_biotype: protein_coding
description:
  Transcriptional regulator HdfR; Negatively regulates the transcription of the flagellar master operon flhDC by binding to the upstream region of the operon.


ensembl_gene_id: LFZ48_16285
symbol: KSB59635.1
gene_biotype: protein_coding
description:
  Among the AAA+ ATPases, the YifB protease family belongs to the Helix 2 insert clade; unknown function; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_16290
symbol: KSB59636.1
gene_biotype: protein_coding
description:
  Acetolactate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_16295
symbol: KSB59637.1
gene_biotype: protein_coding
description:
  Acetolactate synthase catalytic subunit; Catalyzes the formation of 2-acetolactate from pyruvate; also known as acetolactate synthase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_16300
symbol: ilvM
gene_biotype: protein_coding
description:
  Acetolactate synthase 2 regulatory subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_16305
symbol: ilvE
gene_biotype: protein_coding
description:
  Branched-chain amino acid aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: LFZ48_16310
symbol: ilvD
gene_biotype: protein_coding
description:
  Dihydroxy-acid dehydratase; Catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the IlvD/Edd family.


ensembl_gene_id: LFZ48_16325
symbol: KSB59708.1
gene_biotype: protein_coding
description:
  Transcriptional regulator; Participates in controlling several genes involved in isoleucine and valine biosynthesis; activates the transcription of the ilvC gene in the presence of acetolactate or acetohydroxybutyrate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: LFZ48_16330
symbol: ilvC
gene_biotype: protein_coding
description:
  Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate.


ensembl_gene_id: LFZ48_16335
symbol: KSB59643.1
gene_biotype: protein_coding
description:
  Peptidylprolyl isomerase; Rotamase C; accelerates isomerization of the peptidyl prolyl bond; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_16340
symbol: KSB59709.1
gene_biotype: protein_coding
description:
  CarD family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_16355
symbol: rep
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase Rep; Rep helicase is a single-stranded DNA-dependent ATPase involved in DNA replication; it can initiate unwinding at a nick in the DNA. It binds to the single-stranded DNA and acts in a progressive fashion along the DNA in the 3' to 5' direction.


ensembl_gene_id: LFZ48_16360
symbol: gppA
gene_biotype: protein_coding
description:
  Guanosine polyphosphate pyrophosphohydrolase; Catalyzes the conversion of pppGpp to ppGpp. Guanosine pentaphosphate (pppGpp) is a cytoplasmic signaling molecule which together with ppGpp controls the 'stringent response', an adaptive process that allows bacteria to respond to amino acid starvation, resulting in the coordinated regulation of numerous cellular activities.


ensembl_gene_id: LFZ48_16365
symbol: rhlB
gene_biotype: protein_coding
description:
  ATP-dependent RNA helicase RhlB; DEAD-box RNA helicase involved in RNA degradation. Has RNA- dependent ATPase activity and unwinds double-stranded RNA. Belongs to the DEAD box helicase family. RhlB subfamily.


ensembl_gene_id: LFZ48_16370
symbol: trxA
gene_biotype: protein_coding
description:
  Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thioredoxin family.


ensembl_gene_id: LFZ48_16375
symbol: rho
gene_biotype: protein_coding
description:
  Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.


ensembl_gene_id: LFZ48_16385
symbol: wecA
gene_biotype: protein_coding
description:
  UDP-phosphate N-acetylglucosaminyl 1-phosphate transferase; Catalyzes the transfer of the GlcNAc-1-phosphate moiety from UDP-GlcNAc onto the carrier lipid undecaprenyl phosphate (C55-P), yielding GlcNAc-pyrophosphoryl-undecaprenyl (GlcNAc-PP-C55).


ensembl_gene_id: LFZ48_16390
symbol: wzzE
gene_biotype: protein_coding
description:
  Lipopolysaccharide biosynthesis protein; Modulates the polysaccharide chain length of enterobacterial common antigen (ECA); Belongs to the WzzB/Cld/Rol family.


ensembl_gene_id: LFZ48_16395
symbol: wecB
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 2-epimerase; Catalyzes the reversible epimerization at C-2 of UDP-N- acetylglucosamine (UDP-GlcNAc) and thereby provides bacteria with UDP- N-acetylmannosamine (UDP-ManNAc), the activated donor of ManNAc residues.


ensembl_gene_id: LFZ48_16400
symbol: wecC
gene_biotype: protein_coding
description:
  UDP-N-acetyl-D-mannosamine dehydrogenase; Catalyzes the four-electron oxidation of UDP-N-acetyl-D- mannosamine (UDP-ManNAc), reducing NAD(+) and releasing UDP-N- acetylmannosaminuronic acid (UDP-ManNAcA); Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. WecC subfamily.


ensembl_gene_id: LFZ48_16405
symbol: KSB59655.1
gene_biotype: protein_coding
description:
  dTDP-glucose 4,6-dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.


ensembl_gene_id: LFZ48_16410
symbol: rfbA
gene_biotype: protein_coding
description:
  Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.


ensembl_gene_id: LFZ48_16415
symbol: wecD
gene_biotype: protein_coding
description:
  TDP-fucosamine acetyltransferase; Catalyzes the acetylation of dTDP-fucosamine (dTDP-4-amino- 4,6-dideoxy-D-galactose) to dTDP-Fuc4NAc, which is utilized in the biosynthesis of the enterobacterial common antigen (ECA). Belongs to the WecD family.


ensembl_gene_id: LFZ48_16420
symbol: wecE
gene_biotype: protein_coding
description:
  TDP-4-oxo-6-deoxy-D-glucose aminotransferase; Catalyzes the synthesis of dTDP-4-amino-4,6-dideoxy-D- galactose (dTDP-Fuc4N) from dTDP-4-keto-6-deoxy-D-glucose (dTDP-D- Glc4O) and L-glutamate; Belongs to the DegT/DnrJ/EryC1 family.


ensembl_gene_id: LFZ48_16425
symbol: wzxE
gene_biotype: protein_coding
description:
  O-antigen translocase; Mediates the transbilayer movement of Und-PP-GlcNAc-ManNAcA- Fuc4NAc (lipid III) from the inner to the outer leaflet of the cytoplasmic membrane during the assembly of enterobacterial common antigen (ECA); Belongs to the polysaccharide transport (PST) (TC 2.A.66.2) family.


ensembl_gene_id: LFZ48_16430
symbol: wecF
gene_biotype: protein_coding
description:
  4-alpha-L-fucosyltransferase; Catalyzes the synthesis of Und-PP-GlcNAc-ManNAcA-Fuc4NAc (Lipid III), the third lipid-linked intermediate involved in ECA synthesis; Belongs to the glycosyltransferase 56 family.


ensembl_gene_id: LFZ48_16435
symbol: wzyE
gene_biotype: protein_coding
description:
  Hypothetical protein; Probably involved in the polymerization of enterobacterial common antigen (ECA) trisaccharide repeat units; Belongs to the WzyE family.


ensembl_gene_id: LFZ48_16440
symbol: wecG
gene_biotype: protein_coding
description:
  UDP-N-acetyl-D-mannosaminuronic acid transferase; Catalyzes the synthesis of Und-PP-GlcNAc-ManNAcA (Lipid II), the second lipid-linked intermediate involved in enterobacterial common antigen (ECA) synthesis.


ensembl_gene_id: LFZ48_16445
symbol: KSB59663.1
gene_biotype: protein_coding
description:
  D-alanine/D-serine/glycine permease; Involved in the transport across the cytoplasmic membrane of D-alanine, D-serine and glycine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_16470
symbol: KSB59664.1
gene_biotype: protein_coding
description:
  Protoheme IX biogenesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_16475
symbol: KSB59665.1
gene_biotype: protein_coding
description:
  uroporphyrin-III methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_16480
symbol: hemD
gene_biotype: protein_coding
description:
  uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.


ensembl_gene_id: LFZ48_16485
symbol: hemC
gene_biotype: protein_coding
description:
  Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.


ensembl_gene_id: LFZ48_16490
symbol: cyaA
gene_biotype: protein_coding
description:
  Adenylate cyclase; Catalyzes transfer of adenylyl group of ATP from pyrophosphate to the 3'-hydroxyl group to form cyclic AMP; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the adenylyl cyclase class-1 family.


ensembl_gene_id: LFZ48_16495
symbol: cyaY
gene_biotype: protein_coding
description:
  Frataxin-like protein; Involved in iron-sulfur (Fe-S) cluster assembly. May act as a regulator of Fe-S biogenesis.


ensembl_gene_id: LFZ48_16510
symbol: dapF
gene_biotype: protein_coding
description:
  Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.


ensembl_gene_id: LFZ48_16520
symbol: xerC
gene_biotype: protein_coding
description:
  Recombinase XerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. Binds cooperatively to specific DNA consensus sequences that are separated from XerD binding sites by a short central region, forming the heterotetrameric XerC-XerD complex that recombines DNA substrates. The complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. In the complex XerC specifically exchanges the top DN [...]


ensembl_gene_id: LFZ48_16525
symbol: yigB
gene_biotype: protein_coding
description:
  Flavin mononucleotide phosphatase; YigB; member of the haloacid dehalogenase (HAD)-like hydrolases superfamily of protein; unknown function; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_16530
symbol: uvrD
gene_biotype: protein_coding
description:
  DNA-dependent helicase II; Unwinds DNA duplexes with 3' to 5' polarity with respect to the bound strand and initiates unwinding most effectively when a single-stranded region is present; involved in the post-incision events of nucleotide excision repair and methyl-directed mismatch repair; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_16535
symbol: corA
gene_biotype: protein_coding
description:
  Magnesium transporter CorA; Mediates influx of magnesium ions. Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.


ensembl_gene_id: LFZ48_16550
symbol: rarD-2
gene_biotype: protein_coding
description:
  Chloramphenical resistance permease RarD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_16560
symbol: pldA
gene_biotype: protein_coding
description:
  Phospholipase; Hydrolysis of phosphatidylcholine with phospholipase A2 (EC 3.1.1.4) and phospholipase A1 (EC 3.1.1.32) activities. Belongs to the phospholipase A1 family.


ensembl_gene_id: LFZ48_16565
symbol: recQ
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase RecQ; Functions in blocking illegitimate recombination, enhancing topoisomerase activity, initiating SOS signaling and clearing blocked replication forks; component of the RecF recombinational pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_16575
symbol: rhtB
gene_biotype: protein_coding
description:
  Homoserine transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_16580
symbol: KSB59684.1
gene_biotype: protein_coding
description:
  Lysophospholipase; Lecithinase B; catalyzes the conversion of 1-lysophosphatidylcholine to glycerophosphocholine; can also hydrolyze 2-acyl glycerophosphoethanolamine and other substrates; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_16595
symbol: KSB59687.1
gene_biotype: protein_coding
description:
  Homocysteine-binding; positive regulator of metA, metE and metH; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: LFZ48_16600
symbol: metE
gene_biotype: protein_coding
description:
  5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family.


ensembl_gene_id: LFZ48_16610
symbol: KSB59689.1
gene_biotype: protein_coding
description:
  Carboxymethylenebutenolidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_16615
symbol: udp_1
gene_biotype: protein_coding
description:
  Uridine phosphorylase; Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the PNP/UDP phosphorylase family.


ensembl_gene_id: LFZ48_16620
symbol: rmuC
gene_biotype: protein_coding
description:
  Recombinase RmuC; YigN; nuclease that may cleave DNA structures arising during the recombination of short-inverted repeats and thereby prevents the inversion of the internal sequence; transcription is induced by DNA-damaging agents such as nalidixic acid or mitomycin C in a LexA-dependent manner; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_16625
symbol: ubiE
gene_biotype: protein_coding
description:
  Ubiquinone biosynthesis methyltransferase UbiE; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2).


ensembl_gene_id: LFZ48_16635
symbol: ubiB
gene_biotype: protein_coding
description:
  Ubiquinone biosynthesis protein UbiB; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis.


ensembl_gene_id: LFZ48_16640
symbol: tatA
gene_biotype: protein_coding
description:
  Preprotein translocase subunit TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.


ensembl_gene_id: LFZ48_16645
symbol: tatB
gene_biotype: protein_coding
description:
  Preprotein translocase; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation.


ensembl_gene_id: LFZ48_16650
symbol: tatC
gene_biotype: protein_coding
description:
  Twin-arginine protein translocation system subunit TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides.


ensembl_gene_id: LFZ48_16655
symbol: tatD
gene_biotype: protein_coding
description:
  Hydrolase TatD; 3'-5' exonuclease that prefers single-stranded DNA and RNA. May play a role in the H(2)O(2)-induced DNA damage repair. Belongs to the metallo-dependent hydrolases superfamily. TatD-type hydrolase family. TatD subfamily.


ensembl_gene_id: LFZ48_16660
symbol: rfaH
gene_biotype: protein_coding
description:
  Transcriptional regulator; Enhances distal genes transcription elongation in a specialized subset of operons that encode extracytoplasmic components. RfaH is recruited into a multi-component RNA polymerase complex by the ops element, which is a short conserved DNA sequence located downstream of the main promoter of these operons. Once bound, RfaH suppresses pausing and inhibits Rho-dependent and intrinsic termination at a subset of sites. Termination signals are bypassed, which allows complete synthesis of long RNA chains.


ensembl_gene_id: LFZ48_16665
symbol: ubiD
gene_biotype: protein_coding
description:
  3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol, an intermediate step in ubiquinone biosynthesis.


ensembl_gene_id: LFZ48_16670
symbol: fre
gene_biotype: protein_coding
description:
  NAD(P)H-flavin reductase; catalyzes the reversible oxidation/reduction of NAD(P) and flavine mononucleotide; in Salmonella and E. coli this protein also reduces aquacob(III)alamin to cob(II)alamin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_16685
symbol: fadB
gene_biotype: protein_coding
description:
  Multifunctional fatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family.


ensembl_gene_id: LFZ48_16700
symbol: KSB59705.1
gene_biotype: protein_coding
description:
  Potassium transporter; Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA; Belongs to the TrkH potassium transport family.


ensembl_gene_id: LFZ48_16705
symbol: hemG
gene_biotype: protein_coding
description:
  Catalyzes the oxidation of protoporphyrinogen IX to form protoporphyrin IX; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_16720
symbol: metG
gene_biotype: protein_coding
description:
  methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.


ensembl_gene_id: LFZ48_16725
symbol: KSB59201.1
gene_biotype: protein_coding
description:
  Antiporter; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.


ensembl_gene_id: LFZ48_16735
symbol: KSB59203.1
gene_biotype: protein_coding
description:
  Fimbrial chaperone protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_16755
symbol: KSB59207.1
gene_biotype: protein_coding
description:
  Heavy metal resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_16760
symbol: thiM
gene_biotype: protein_coding
description:
  Hydroxyethylthiazole kinase; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family.


ensembl_gene_id: LFZ48_16765
symbol: thiD
gene_biotype: protein_coding
description:
  Catalyzes the formation hydroxymethylpyrimidine phosphate from hydroxymethylpyrimidine and the formation of of 4-amino-2-methyl-5-diphosphomethylpyrimidine from hydroxymethylpyrimidine phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_16785
symbol: KSB59213.1
gene_biotype: protein_coding
description:
  Nucleoside transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_16790
symbol: KSB59214.1
gene_biotype: protein_coding
description:
  Fructose-bisphosphate aldolase; Catalyzes the formation of glycerone phosphate and D-glyceraldehyde 3-phosphate from D-fructose 1,6-bisphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_16795
symbol: yegS
gene_biotype: protein_coding
description:
  Lipid kinase; Probably phosphorylates lipids; the in vivo substrate is unknown; Belongs to the diacylglycerol/lipid kinase family. YegS lipid kinase subfamily.


ensembl_gene_id: LFZ48_16815
symbol: baeR
gene_biotype: protein_coding
description:
  Response regulator in two-component regulatory system with BaeS; regulator of RNA synthesis, flagellar biosynthesis, chemotaxis and transport; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_16830
symbol: mdtC
gene_biotype: protein_coding
description:
  Multidrug transporter; Part of a tripartite efflux system composed of MdtA, MdtB and MdtC which confers resistance against novobiocin and deoxycholate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. MdtC subfamily.


ensembl_gene_id: LFZ48_16835
symbol: mdtB
gene_biotype: protein_coding
description:
  Multidrug transporter; Part of a tripartite efflux system composed of MdtA, MdtB and MdtC which confers resistance against novobiocin and deoxycholate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. MdtB subfamily.


ensembl_gene_id: LFZ48_16840
symbol: mdtA
gene_biotype: protein_coding
description:
  Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: LFZ48_16845
symbol: KSB59224.1
gene_biotype: protein_coding
description:
  Chaperone; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_16850
symbol: KSB59225.1
gene_biotype: protein_coding
description:
  3-methyladenine DNA glycosylase; Inducible, catalyzes the hydrolysis of alkylated DNA, releasing 3-methyladenine, 3-methylguanine, 7-methylguanine and 7-methyladenine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_16860
symbol: udk
gene_biotype: protein_coding
description:
  Uridine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_16870
symbol: KSB59229.1
gene_biotype: protein_coding
description:
  YegA; inner membrane protein involved in the assembly of outer membrane proteins (OMPs); asmA-null mutants show low lipopolysaccharide (LPS) levels, suggesting a role in LPS biogenesis and/or in restricting outer membrane fluidity, resulting on altered assembly of OMPs; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_16880
symbol: wza
gene_biotype: protein_coding
description:
  Polysaccharide export protein Wza; Required for the translocation of capsular polysaccharide through the outer membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_16885
symbol: wzb
gene_biotype: protein_coding
description:
  Protein tyrosine phosphatase; Wzb shows phosphatase activity towards the autophosphorylated Wzc protein, which induces colanic acid biosynthesis; catalyzes the phosphorylation of UDP-glucose dehydrogenase, an enzyme involved in colanic acid biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.


ensembl_gene_id: LFZ48_16890
symbol: KSB59233.1
gene_biotype: protein_coding
description:
  Tyrosine protein kinase; Wzc; catalyzes the autophosphorylation on tyrosine residues which downregulates the biosynthesis of colonic acid (an extracellular polysaccharide); Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_16900
symbol: wcaB
gene_biotype: protein_coding
description:
  Acetyltransferase believed to catalyze the addition of the acetyl group that is attached through an O linkage to the first fucosyl residue of the colanic acid repetitive unit (E unit); wcaB is induced in sessile bacteria and by osmotic shock, and repressed when grown in rich medium; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the transferase hexapeptide repeat family.


ensembl_gene_id: LFZ48_16910
symbol: wcaD
gene_biotype: protein_coding
description:
  Essential for colanic acid biosynthesis; colanic acid is an exopolysaccharide produced under stress conditions that confers acid and heat tolerance; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_16915
symbol: wcaE
gene_biotype: protein_coding
description:
  Colanic acid biosynthesis glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_16920
symbol: wcaF
gene_biotype: protein_coding
description:
  Acyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_16925
symbol: gmd
gene_biotype: protein_coding
description:
  GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.


ensembl_gene_id: LFZ48_16930
symbol: fcl
gene_biotype: protein_coding
description:
  GDP-fucose synthetase; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction.


ensembl_gene_id: LFZ48_16945
symbol: cpsB
gene_biotype: protein_coding
description:
  Mannose-1-phosphate guanyltransferase; Capsular polysaccharide colanic acid biosynthesis protein; catalyzes the formation of GDP-mannose from GTP and alpha-D-mannose 1-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the mannose-6-phosphate isomerase type 2 family.


ensembl_gene_id: LFZ48_16950
symbol: KSB59245.1
gene_biotype: protein_coding
description:
  Phosphomannomutase; Capsular polysaccharide biosynthesis protein; catalyzes the formation of D-mannose 6-phosphate from alpha-D-mannose 1-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_16955
symbol: KSB59246.1
gene_biotype: protein_coding
description:
  UDP-glucose lipid carrier transferase; WcaJ; glucose-1-phosphate transferase responsible for the addition of the first glucose-1-phosphate from UDP-glucose to the lipid carrier undecaprenyl phosphate in the biosynthesis of colanic acid; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_16960
symbol: KSB59247.1
gene_biotype: protein_coding
description:
  Colanic acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_16965
symbol: wcaK
gene_biotype: protein_coding
description:
  Colanic acid biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_16975
symbol: wcaM
gene_biotype: protein_coding
description:
  Colanic acid biosynthesis protein; WcaM from Salmonella enterica is essential for biofilm formation on HEp-2 cells and chicken intestinal tissue but not on a plastic surface; may be involved in the biosynthesis of colanic acid; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_16980
symbol: KSB59251.1
gene_biotype: protein_coding
description:
  UTP--glucose-1-phosphate uridylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_16990
symbol: KSB59253.1
gene_biotype: protein_coding
description:
  Aminotransferase DegT; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DegT/DnrJ/EryC1 family.


ensembl_gene_id: LFZ48_17035
symbol: galE-2
gene_biotype: protein_coding
description:
  UDP-glucose 4-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NAD(P)-dependent epimerase/dehydratase family.


ensembl_gene_id: LFZ48_17045
symbol: KSB59262.1
gene_biotype: protein_coding
description:
  6-phosphogluconate dehydrogenase; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.


ensembl_gene_id: LFZ48_17050
symbol: KSB59263.1
gene_biotype: protein_coding
description:
  UDP-glucose 6-dehydrogenase; Catalyzes the formation of UDP-glucuronate from UDP-glucose; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_17055
symbol: KSB59264.1
gene_biotype: protein_coding
description:
  Chain length determination protein; Regulator of length of O-antigen component of lipopolysaccharide chains; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_17060
symbol: hisI
gene_biotype: protein_coding
description:
  phosphoribosyl-ATP pyrophosphatase; Catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribosyl)-ATP and the subsequent formation of 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide from 1-(5-phosphoribosyl)-AMP in histidine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology; In the N-terminal section; belongs to the PRA-CH family.


ensembl_gene_id: LFZ48_17065
symbol: hisF
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.


ensembl_gene_id: LFZ48_17070
symbol: hisA
gene_biotype: protein_coding
description:
  1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_17075
symbol: hisH
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.


ensembl_gene_id: LFZ48_17080
symbol: hisB
gene_biotype: protein_coding
description:
  Imidazoleglycerol-phosphate dehydratase; Catalyzes the formation of 3-(imidazol-4-yl)-2-oxopropyl phosphate from D-ethythro-1-(imidazol-4-yl)glycerol 3-phosphate and histidinol from histidinol phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology; In the N-terminal section; belongs to the histidinol- phosphatase family.


ensembl_gene_id: LFZ48_17085
symbol: hisC
gene_biotype: protein_coding
description:
  Histidinol-phosphate aminotransferase; Catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.


ensembl_gene_id: LFZ48_17090
symbol: hisD
gene_biotype: protein_coding
description:
  Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.


ensembl_gene_id: LFZ48_17095
symbol: hisG
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity.


ensembl_gene_id: LFZ48_17110
symbol: yeeF
gene_biotype: protein_coding
description:
  Putrescine/spermidine ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_17115
symbol: sbcB
gene_biotype: protein_coding
description:
  Exonucleolytic cleavage in the 3'- to 5'-direction to yield nucleoside 5'-phosphates; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_17155
symbol: phsA
gene_biotype: protein_coding
description:
  Thiosulfate reductase PhsA; Catalyzes the production of hydrogen sulfide from thiosulfate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: LFZ48_17165
symbol: KSB59282.1
gene_biotype: protein_coding
description:
  Thiosulfate reductase cytochrome B subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_17175
symbol: sbmC
gene_biotype: protein_coding
description:
  DNA gyrase inhibitor; Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell.


ensembl_gene_id: LFZ48_17185
symbol: yeeX
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0265 family.


ensembl_gene_id: LFZ48_17190
symbol: KSB59287.1
gene_biotype: protein_coding
description:
  GHMP kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_17195
symbol: pduW
gene_biotype: protein_coding
description:
  Acetate kinase; Enables the production of acetyl-CoA by phosphorylating acetate in the presence of ATP and a divalent cation; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_17200
symbol: eutP
gene_biotype: protein_coding
description:
  Propanediol utilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the EutP/PduV family.


ensembl_gene_id: LFZ48_17205
symbol: pduU
gene_biotype: protein_coding
description:
  Propanediol utilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_17225
symbol: KSB59294.1
gene_biotype: protein_coding
description:
  Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_17230
symbol: KSB59295.1
gene_biotype: protein_coding
description:
  Cobalamin adenosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Cob(I)alamin adenosyltransferase family.


ensembl_gene_id: LFZ48_17235
symbol: KSB59296.1
gene_biotype: protein_coding
description:
  Ethanolamine utilization protein EutN; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_17245
symbol: KSB59298.1
gene_biotype: protein_coding
description:
  Propanediol utilization protein; Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate.


ensembl_gene_id: LFZ48_17250
symbol: pduK
gene_biotype: protein_coding
description:
  Microcompartment protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_17260
symbol: KSB59301.1
gene_biotype: protein_coding
description:
  Propanediol dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_17265
symbol: KSB59302.1
gene_biotype: protein_coding
description:
  Glycerol dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_17270
symbol: pduE
gene_biotype: protein_coding
description:
  Propanediol dehydratase; With pduCD catalyzes the formation of propionaldehyde from 1,2-propanediol; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_17275
symbol: pduD
gene_biotype: protein_coding
description:
  Propanediol dehydratase; With PduCE catalyzes the formation of propionaldehyde from 1,2-propanediol; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_17280
symbol: pduC
gene_biotype: protein_coding
description:
  Propanediol dehydratase; With pduED catalyzes the formation of propionaldehyde from 1,2-propanediol; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_17285
symbol: pduB
gene_biotype: protein_coding
description:
  Propanediol utilization protein; Carboxysome shell protein; may be involved in the formation of the polyhedral organelles involved in propanediol degradation; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_17305
symbol: cbiA
gene_biotype: protein_coding
description:
  Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.


ensembl_gene_id: LFZ48_17310
symbol: cbiB
gene_biotype: protein_coding
description:
  Cobalamin biosynthesis protein; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group. However, the true cosubstrate could be (R)-1-amino-2-propanol O-2-phosphate, leading to cobinamide phosphate.


ensembl_gene_id: LFZ48_17315
symbol: cbiC
gene_biotype: protein_coding
description:
  precorrin-8X methylmutase; Catalyzes the interconversion of cobalt-precorrin-8X and cobyrinic acid in the anaerobic biosynthesis of cobalamin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_17320
symbol: cbiD
gene_biotype: protein_coding
description:
  cobalt-precorrin-6A synthase; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A.


ensembl_gene_id: LFZ48_17325
symbol: KSB59314.1
gene_biotype: protein_coding
description:
  Catalyzes the methylation of C-5 in cobalt-precorrin-6Y to form cobalt-precorrin-7W-a; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_17330
symbol: KSB59315.1
gene_biotype: protein_coding
description:
  Catalyzes the methylation of either C-15 or C-5 in cobalt-precorrin-6Y to form cobalt-precorrin-7W; decarboxylating; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_17335
symbol: cbiF
gene_biotype: protein_coding
description:
  Catalyzes the formation of cobalt-precorrin-5 from cobalt-precorrin-4; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_17340
symbol: cbiG
gene_biotype: protein_coding
description:
  Cobalamin biosynthesis protein CbiG; Catalyzes the formation of cobalt-precorrin 4 from cobalt-precorrin 3; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_17345
symbol: cbiH
gene_biotype: protein_coding
description:
  Catalyzes the formation of cobalt-precorrin-4 from cobalt-precorrin-3B; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_17350
symbol: KSB59319.1
gene_biotype: protein_coding
description:
  cobalt-precorrin-6X reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_17355
symbol: KSB59320.1
gene_biotype: protein_coding
description:
  Sirohydrochlorin cobaltochelatase; Catalyzes the insertion of Co(2+) into sirohydrochlorin. Belongs to the CbiK family.


ensembl_gene_id: LFZ48_17360
symbol: KSB59321.1
gene_biotype: protein_coding
description:
  Cobalt-precorrin-2 C(20)-methyltransferase; Methylates cobalt-precorrin-2 at the C-20 position to produce cobalt-precorrin-3A in the anaerobic cobalamin biosynthesis pathway.


ensembl_gene_id: LFZ48_17365
symbol: cbiM
gene_biotype: protein_coding
description:
  Cobalamin biosynthesis protein CbiM; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import.


ensembl_gene_id: LFZ48_17370
symbol: cbiN
gene_biotype: protein_coding
description:
  Cobalamin biosynthesis protein CbiN; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import; Belongs to the CbiN family.


ensembl_gene_id: LFZ48_17375
symbol: KSB59324.1
gene_biotype: protein_coding
description:
  Cobalamin biosynthesis protein CbiQ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_17380
symbol: cbiO
gene_biotype: protein_coding
description:
  Cobalt transporter ATP-binding subunit; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import. Presumably responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Cobalt importer (TC 3.A.1.18.1) family.


ensembl_gene_id: LFZ48_17385
symbol: cobQ
gene_biotype: protein_coding
description:
  Cobalamin biosynthesis protein CobQ; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.


ensembl_gene_id: LFZ48_17390
symbol: cobU
gene_biotype: protein_coding
description:
  Adenosylcobinamide kinase; Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate.


ensembl_gene_id: LFZ48_17395
symbol: cobS
gene_biotype: protein_coding
description:
  Cobalamin synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.


ensembl_gene_id: LFZ48_17400
symbol: cobT
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB). Belongs to the CobT family.


ensembl_gene_id: LFZ48_17405
symbol: KSB59329.1
gene_biotype: protein_coding
description:
  L,D-transpeptidase; Catalyzes th removal of D-alanine and attachment of the murein lipoprotein to the peptidoglycan tetrapeptide chain; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_17440
symbol: amn
gene_biotype: protein_coding
description:
  AMP nucleosidase; Catalyzes the hydrolysis of the N-glycosidic bond of AMP to form adenine and ribose 5-phosphate. Involved in regulation of AMP concentrations.


ensembl_gene_id: LFZ48_17475
symbol: yqjZ
gene_biotype: protein_coding
description:
  Antibiotic biosynthesis monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_17585
symbol: kdsA
gene_biotype: protein_coding
description:
  2-dehydro-3-deoxyphosphooctonate aldolase; Catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the KdsA family.


ensembl_gene_id: LFZ48_17600
symbol: prmC
gene_biotype: protein_coding
description:
  SAM-dependent methyltransferase; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.


ensembl_gene_id: LFZ48_17605
symbol: prfA
gene_biotype: protein_coding
description:
  Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.


ensembl_gene_id: LFZ48_17610
symbol: hemA
gene_biotype: protein_coding
description:
  glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).


ensembl_gene_id: LFZ48_17615
symbol: lolB
gene_biotype: protein_coding
description:
  Outer membrane lipoprotein LolB; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein.


ensembl_gene_id: LFZ48_17620
symbol: ispE
gene_biotype: protein_coding
description:
  Kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol; Belongs to the GHMP kinase family. IspE subfamily.


ensembl_gene_id: LFZ48_17625
symbol: prs
gene_biotype: protein_coding
description:
  Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.


ensembl_gene_id: LFZ48_17630
symbol: dauA
gene_biotype: protein_coding
description:
  Transporter; Role in sulfate transport across the inner membrane; member of the SulP family of sulfate transporters; seems to mediate transport via sulfate/proton symport; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_17635
symbol: KSB59363.1
gene_biotype: protein_coding
description:
  Hypothetical protein; YchH; transcription activated by CRP (cyclic AMP receptor protein), a global transcription factor involved in regulation of metabolism in enteric bacteria; ychH presents a class II promoter to bind CRP; unknown function; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_17640
symbol: pth
gene_biotype: protein_coding
description:
  peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.


ensembl_gene_id: LFZ48_17645
symbol: ychF
gene_biotype: protein_coding
description:
  GTP-binding protein; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.


ensembl_gene_id: LFZ48_17665
symbol: cybH-2
gene_biotype: protein_coding
description:
  Hydrogenase 1 b-type cytochrome subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_17670
symbol: KSB59370.1
gene_biotype: protein_coding
description:
  Hydrogenase 1 maturation protease; HyaD; endopeptidase involved in the cleavage of the C-terminus end of HyaB (the large subunit of hydrogenase 1); Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_17675
symbol: SBOV18161
gene_biotype: protein_coding
description:
  Hydrogenase-1 operon protein HyaE; Involved in processing hydrogenase proteins HyaA and HyaB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_17680
symbol: KSB59372.1
gene_biotype: protein_coding
description:
  Hydrogenase-1 operon protein HyaF; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_17700
symbol: gdhA_1
gene_biotype: protein_coding
description:
  Glutamate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.


ensembl_gene_id: LFZ48_17705
symbol: treA
gene_biotype: protein_coding
description:
  Trehalase; Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system; Belongs to the glycosyl hydrolase 37 family.


ensembl_gene_id: LFZ48_17715
symbol: ycgR
gene_biotype: protein_coding
description:
  Flagellar brake protein; Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)-dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility.


ensembl_gene_id: LFZ48_17720
symbol: emtA
gene_biotype: protein_coding
description:
  Lytic murein transglycosylase; Murein-degrading enzyme. May play a role in recycling of muropeptides during cell elongation and/or cell division. Preferentially cleaves at a distance of more than two disaccharide units from the ends of the glycan chain.


ensembl_gene_id: LFZ48_17725
symbol: ldcA
gene_biotype: protein_coding
description:
  Carboxypeptidase; Catalyzes the release of D-alanine from L-alanyl-D-glutamyl-meso-diaminopimelyl-D-alanine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_17730
symbol: cvrA
gene_biotype: protein_coding
description:
  Potassium:proton antiporter; K(+)/H(+) antiporter that extrudes potassium in exchange for external protons and maintains the internal concentration of potassium under toxic levels; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family. NhaP2 subfamily.


ensembl_gene_id: LFZ48_17745
symbol: KSB59385.1
gene_biotype: protein_coding
description:
  SpoVR family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_17755
symbol: nhaB
gene_biotype: protein_coding
description:
  Sodium:proton antiporter; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaB Na(+)/H(+) (TC 2.A.34) antiporter family.


ensembl_gene_id: LFZ48_17760
symbol: dsbB
gene_biotype: protein_coding
description:
  Disulfide bond formation protein B; Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein; Belongs to the DsbB family.


ensembl_gene_id: LFZ48_17780
symbol: ycgN
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0260 family.


ensembl_gene_id: LFZ48_17795
symbol: minC
gene_biotype: protein_coding
description:
  Septum formation inhibitor; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family.


ensembl_gene_id: LFZ48_17800
symbol: minD_2
gene_biotype: protein_coding
description:
  ATPase; with MinC inhibits cell division by blocking formation of the polar Z ring septums; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_17805
symbol: minE
gene_biotype: protein_coding
description:
  Cell division topological specificity factor MinE; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell.


ensembl_gene_id: LFZ48_17810
symbol: rnd
gene_biotype: protein_coding
description:
  Ribonuclease D; Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides; Belongs to the RNase D family.


ensembl_gene_id: LFZ48_17815
symbol: fadD
gene_biotype: protein_coding
description:
  Long-chain fatty acid--CoA ligase; Activates fatty acids by binding to coenzyme A; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_17830
symbol: KSB59399.1
gene_biotype: protein_coding
description:
  ATP-dependent helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_17840
symbol: SBOV18511
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0181 family.


ensembl_gene_id: LFZ48_17845
symbol: pabB
gene_biotype: protein_coding
description:
  Para-aminobenzoate synthase component 1; catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and L-glutamine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_17860
symbol: KSB59405.1
gene_biotype: protein_coding
description:
  c-di-GMP phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_17890
symbol: KSB59063.1
gene_biotype: protein_coding
description:
  Transcriptional regulator; Unknown function; when overproduced it confers drug-resistance; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_17910
symbol: SBOV22311
gene_biotype: protein_coding
description:
  Osmoprotectant uptake system permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_17925
symbol: opuBC
gene_biotype: protein_coding
description:
  Osmoprotectant uptake system substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_17930
symbol: KSB59071.1
gene_biotype: protein_coding
description:
  beta-D-glucoside glucohydrolase; Catalyzes the hydrolysis of terminal beta-D-glucosyl residues; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 3 family.


ensembl_gene_id: LFZ48_17935
symbol: dld
gene_biotype: protein_coding
description:
  Lactate dehydrogenase; Catalyzes the oxidation of D-lactate to pyruvate. Belongs to the quinone-dependent D-lactate dehydrogenase family.


ensembl_gene_id: LFZ48_17940
symbol: pbpG
gene_biotype: protein_coding
description:
  D-alanyl-D-alanine endopeptidase; Specifically hydrolyze the DD-diaminopimelate-alanine bonds in high-molecular-mass murein sacculi; Penicillin-binding protein 7; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S11 family.


ensembl_gene_id: LFZ48_17960
symbol: mdtQ
gene_biotype: protein_coding
description:
  Multidrug transporter permease; May be involved in resistance to puromycin, acriflavine and tetraphenylarsonium chloride; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_17965
symbol: dusC
gene_biotype: protein_coding
description:
  tRNA-dihydrouridine synthase C; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U16 in tRNAs. Belongs to the Dus family. DusC subfamily.


ensembl_gene_id: LFZ48_17970
symbol: mhbM
gene_biotype: protein_coding
description:
  Salicylate hydroxylase; Catalyzes the formation of catechol from salicylate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_17975
symbol: maiA
gene_biotype: protein_coding
description:
  Maleylacetoacetate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_17980
symbol: KSB59080.1
gene_biotype: protein_coding
description:
  5-carboxymethyl-2-hydroxymuconate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_17985
symbol: gtdA
gene_biotype: protein_coding
description:
  Gentisate 1,2-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_17990
symbol: KSB59082.1
gene_biotype: protein_coding
description:
  4-hydroxybenzoate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_18010
symbol: cdd
gene_biotype: protein_coding
description:
  Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis.


ensembl_gene_id: LFZ48_18015
symbol: KSB59087.1
gene_biotype: protein_coding
description:
  Vancomycin high temperature exclusion protein; Involved in vancomycin sensitivity and other barrier functions of the cell envelope; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_18025
symbol: KSB59089.1
gene_biotype: protein_coding
description:
  Dihydropyrimidine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_18035
symbol: mglC
gene_biotype: protein_coding
description:
  Beta-methylgalactoside transporter permease; ABC transporter; functions in galactose transport; part of MglA2C2B transporter complex; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: LFZ48_18045
symbol: KSB59093.1
gene_biotype: protein_coding
description:
  Sugar ABC transporter substrate-binding protein; Wtih MglAC is involved in the transport of beta-methylgalactoside; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_18060
symbol: folE
gene_biotype: protein_coding
description:
  GTP cyclohydrolase; Involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_18075
symbol: KSB59099.1
gene_biotype: protein_coding
description:
  Serine dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the iron-sulfur dependent L-serine dehydratase family.


ensembl_gene_id: LFZ48_18090
symbol: cirA
gene_biotype: protein_coding
description:
  Cir; FeuA; CirA; receptor protein for siderophores (colicin IA, IB and V) and microcins (E492, H47, and M); TonB-dependent; able to transport monomers, dimer, and linear trimers of 2,3-dihydorxybenzoylserine; outer membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_18095
symbol: KSB59103.1
gene_biotype: protein_coding
description:
  Lysine transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_18105
symbol: KSB59105.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0324 family.


ensembl_gene_id: LFZ48_18110
symbol: nfo
gene_biotype: protein_coding
description:
  Endonuclease IV; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin.


ensembl_gene_id: LFZ48_18115
symbol: KSB59107.1
gene_biotype: protein_coding
description:
  PTS fructose transporter subunit IIBC; Phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_18120
symbol: fruK
gene_biotype: protein_coding
description:
  1-phosphofructokinase; Converts fructose-1-phosphate and ATP to fructose-1,6-bisphosphate and ADP; highly specific for fructose-1-phopshate; similar to PfkB; forms homodimers; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the carbohydrate kinase PfkB family.


ensembl_gene_id: LFZ48_18125
symbol: KSB59109.1
gene_biotype: protein_coding
description:
  Bifunctional PTS fructose transporter subunit IIA/HPr protein; Phosphoenolpyruvate (PEP)-dependent, sugar transporting phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIA is phosphorylated by phospho-HPr which then transfers the phosphoryl group to the IIB component; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_18155
symbol: yeiP
gene_biotype: protein_coding
description:
  Elongation factor P; Stimulates the peptidyltransferase activity of the 70S ribosome and enhances dipeptide synthesis with N-formylmethionyl-tRNA and puromycin in vitro, suggesting its involvement in the formation of the first peptide bond of a protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the elongation factor P family.


ensembl_gene_id: LFZ48_18160
symbol: torD-2
gene_biotype: protein_coding
description:
  Molecular chaperone TorD; Involved in the biogenesis of TorA. Acts on TorA before the insertion of the molybdenum cofactor and, as a result, probably favors a conformation of the apoenzyme that is competent for acquiring the cofactor; Belongs to the TorD/DmsD family. TorD subfamily.


ensembl_gene_id: LFZ48_18170
symbol: KSB59117.1
gene_biotype: protein_coding
description:
  With TorA forms the inducible trimethylamine N-oxide reductase which transfers electrons from menaquinones first to TorC then to TorA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TorC/TorY family.


ensembl_gene_id: LFZ48_18185
symbol: lpxT
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in the modification of the lipid A domain of lipopolysaccharides (LPS). Transfers a phosphate group from undecaprenyl pyrophosphate (C55-PP) to lipid A to form lipid A 1- diphosphate. Contributes to the recycling of undecaprenyl phosphate (C55-P); Belongs to the LpxT phosphotransferase family.


ensembl_gene_id: LFZ48_18190
symbol: spr
gene_biotype: protein_coding
description:
  Lipoprotein Spr; Mutational suppressor of prc thermosensitivity; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_18195
symbol: rtn_1
gene_biotype: protein_coding
description:
  Involved in resistance to the phages N4 and lambda; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_18200
symbol: KSB59123.1
gene_biotype: protein_coding
description:
  Antibiotic ABC transporter substrate-binding protein; With YejBEF is involved in resistance to microcin C; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_18205
symbol: yejB
gene_biotype: protein_coding
description:
  Microcin ABC transporter permease; With YejAEF is involved in resistance to microcin C; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_18210
symbol: KSB59125.1
gene_biotype: protein_coding
description:
  Microcin ABC transporter permease; Part of the microcin C transport system; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_18215
symbol: KSB59126.1
gene_biotype: protein_coding
description:
  Microcin ABC transporter ATP-binding protein; With YejAEF is involved in resistance to microcin C; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.


ensembl_gene_id: LFZ48_18230
symbol: KSB59128.1
gene_biotype: protein_coding
description:
  Bicyclomycin/multidrug efflux system; Involved in sulfonamide (sulfathiazole) and bicyclomycin resistance; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_18235
symbol: rsuA
gene_biotype: protein_coding
description:
  16S rRNA pseudouridylate synthase; Catalyzes the synthesis pseudouridine from uracil-516 in 16S ribosomal RNA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pseudouridine synthase RsuA family.


ensembl_gene_id: LFZ48_18245
symbol: rplY
gene_biotype: protein_coding
description:
  50S ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family.


ensembl_gene_id: LFZ48_18250
symbol: yejK
gene_biotype: protein_coding
description:
  Nucleoid-associated protein NdpA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_18255
symbol: SBOV23001
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0352 family.


ensembl_gene_id: LFZ48_18270
symbol: KSB59135.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SOS response-associated peptidase family.


ensembl_gene_id: LFZ48_18315
symbol: narP
gene_biotype: protein_coding
description:
  Nitrate/nitrite response regulator NarP; NarP is phosphorylated by NarX and NarQ and can activate fdnG and nitrite or nitrate reductase systems; represses expression of other anaerobic genes; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_18345
symbol: upp
gene_biotype: protein_coding
description:
  Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.


ensembl_gene_id: LFZ48_18350
symbol: purM
gene_biotype: protein_coding
description:
  Phosphoribosylaminoimidazole synthetase; Catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_18355
symbol: purN
gene_biotype: protein_coding
description:
  Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.


ensembl_gene_id: LFZ48_18360
symbol: ppk1
gene_biotype: protein_coding
description:
  Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.


ensembl_gene_id: LFZ48_18365
symbol: ppx
gene_biotype: protein_coding
description:
  Exopolyphosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GppA/Ppx family.


ensembl_gene_id: LFZ48_18405
symbol: guaB
gene_biotype: protein_coding
description:
  Inosine-5-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.


ensembl_gene_id: LFZ48_18410
symbol: xseA
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.


ensembl_gene_id: LFZ48_18435
symbol: sinH
gene_biotype: protein_coding
description:
  Intimin-like protein SinH; Involved in invasion of epithelial cells; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_18445
symbol: der
gene_biotype: protein_coding
description:
  GTP-binding protein Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.


ensembl_gene_id: LFZ48_18450
symbol: bamB
gene_biotype: protein_coding
description:
  Membrane biogenesis protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.


ensembl_gene_id: LFZ48_18460
symbol: hisS
gene_biotype: protein_coding
description:
  histidine--tRNA ligase; Catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_18465
symbol: ispG
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family.


ensembl_gene_id: LFZ48_18470
symbol: rodZ
gene_biotype: protein_coding
description:
  Cytoskeleton protein rodZ; Cytoskeletal protein that is involved in cell-shape control through regulation of the length of the long axis.


ensembl_gene_id: LFZ48_18475
symbol: rlmN
gene_biotype: protein_coding
description:
  23S rRNA (adenine(2503)-C2)-methyltransferase; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family.


ensembl_gene_id: LFZ48_18505
symbol: KSB58933.1
gene_biotype: protein_coding
description:
  Penicillin-binding protein 1C; Penicillin-insensitive transglycosylase/transpeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_18515
symbol: sseA
gene_biotype: protein_coding
description:
  3-mercaptopyruvate sulfurtransferase; Catalyzes the transfer of a sulfur ion to cyanide or to other thiol compounds; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_18520
symbol: KSB58936.1
gene_biotype: protein_coding
description:
  Enhanced serine sensitivity protein SseB; Enhances serine sensitivity caused by inhibition of homoserine dehydrogenase I; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_18535
symbol: fdx
gene_biotype: protein_coding
description:
  2Fe-2S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_18540
symbol: hscA
gene_biotype: protein_coding
description:
  Chaperone protein HscA; Chaperone involved in the maturation of iron-sulfur cluster- containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB. Involved in the maturation of IscU.


ensembl_gene_id: LFZ48_18545
symbol: hscB
gene_biotype: protein_coding
description:
  Co-chaperone HscB; Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA; Belongs to the HscB family.


ensembl_gene_id: LFZ48_18550
symbol: iscA
gene_biotype: protein_coding
description:
  Iron-sulfur cluster assembly protein; Is able to transfer iron-sulfur clusters to apo-ferredoxin. Multiple cycles of [2Fe2S] cluster formation and transfer are observed, suggesting that IscA acts catalytically. Recruits intracellular free iron so as to provide iron for the assembly of transient iron-sulfur cluster in IscU in the presence of IscS, L-cysteine and the thioredoxin reductase system TrxA/TrxB.


ensembl_gene_id: LFZ48_18555
symbol: nifU
gene_biotype: protein_coding
description:
  Scaffolding protein; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters.


ensembl_gene_id: LFZ48_18560
symbol: iscS
gene_biotype: protein_coding
description:
  Cysteine desulfurase; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur and selenium atoms from cysteine and selenocysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins. Also functions as a selenium delivery protein in the pathway for the biosynthesis of selenophosphate.


ensembl_gene_id: LFZ48_18565
symbol: iscR
gene_biotype: protein_coding
description:
  Transcriptional regulator; Regulates the transcription of several operons and genes involved in the biogenesis of Fe-S clusters and Fe-S-containing proteins.


ensembl_gene_id: LFZ48_18570
symbol: trmJ-2
gene_biotype: protein_coding
description:
  tRNA (cytidine/uridine-2'-O-)-methyltransferase; Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA.


ensembl_gene_id: LFZ48_18575
symbol: suhB
gene_biotype: protein_coding
description:
  Inositol monophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the inositol monophosphatase superfamily.


ensembl_gene_id: LFZ48_18585
symbol: KSB58949.1
gene_biotype: protein_coding
description:
  Sulfite reductase subunit A; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_18590
symbol: KSB58950.1
gene_biotype: protein_coding
description:
  Sulfite reductase; With AsrAC catalyzes the reduction of sulfite to hydrogen sulfide; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_18595
symbol: asrC
gene_biotype: protein_coding
description:
  Sulfite reductase subunit C; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.


ensembl_gene_id: LFZ48_18610
symbol: csiE
gene_biotype: protein_coding
description:
  Stationary phase inducible protein CsiE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_18615
symbol: KSB58955.1
gene_biotype: protein_coding
description:
  3-phenylpropionic acid transporter; Transporter of 3-phenylpropionate across the inner membrane; member of the major facilitator superfamily of transporters; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_18620
symbol: glyA
gene_biotype: protein_coding
description:
  Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.


ensembl_gene_id: LFZ48_18625
symbol: hmp
gene_biotype: protein_coding
description:
  Dihydropteridine reductase; Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress; Belongs to the globin family. Two-domain flavohemoproteins subfamily.


ensembl_gene_id: LFZ48_18630
symbol: KSB58958.1
gene_biotype: protein_coding
description:
  Transcriptional regulator; Regulates the cadBA operon; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_18635
symbol: cadB
gene_biotype: protein_coding
description:
  Antiporter protein responsible for lysine import and cadaverine export; member of the lysine-dependent acid resistance system 4 (AR4); inner membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_18645
symbol: KSB58961.1
gene_biotype: protein_coding
description:
  Peptide permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_18655
symbol: KSB58963.1
gene_biotype: protein_coding
description:
  Response regulator GlrR; With GlrK is part of a two-component signal transduction system regulating glmY; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_18665
symbol: qseE
gene_biotype: protein_coding
description:
  Histidine kinase; Part of the GlrKR two-component signal transduction system involved in the regulation of glmY; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_18670
symbol: purL
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate.


ensembl_gene_id: LFZ48_18680
symbol: mltF
gene_biotype: protein_coding
description:
  Lytic murein transglycosylase; Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella.


ensembl_gene_id: LFZ48_18685
symbol: tadA
gene_biotype: protein_coding
description:
  tRNA adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: LFZ48_18695
symbol: KSB58970.1
gene_biotype: protein_coding
description:
  PTS sugar transporter subunit IIC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_18700
symbol: murQ
gene_biotype: protein_coding
description:
  N-acetylmuramic acid-6-phosphate etherase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate. Together with AnmK, is also required for the utilization of anhydro-N-acetylmuramic acid (anhMurNAc) either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the GCKR-like family. MurNAc-6-P etherase subfamily.


ensembl_gene_id: LFZ48_18715
symbol: acpS
gene_biotype: protein_coding
description:
  4'-phosphopantetheinyl transferase; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family.


ensembl_gene_id: LFZ48_18720
symbol: pdxJ
gene_biotype: protein_coding
description:
  Pyridoxine 5'-phosphate synthase; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate.


ensembl_gene_id: LFZ48_18725
symbol: recO
gene_biotype: protein_coding
description:
  DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination. Belongs to the RecO family.


ensembl_gene_id: LFZ48_18730
symbol: era
gene_biotype: protein_coding
description:
  GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.


ensembl_gene_id: LFZ48_18735
symbol: rnc
gene_biotype: protein_coding
description:
  Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.


ensembl_gene_id: LFZ48_18740
symbol: lepB
gene_biotype: protein_coding
description:
  Signal peptidase I; Catalyzes the cleavage of the amino-terminal leader peptide from secretory proteins; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S26 family.


ensembl_gene_id: LFZ48_18745
symbol: lepA
gene_biotype: protein_coding
description:
  Elongation factor 4; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.


ensembl_gene_id: LFZ48_18750
symbol: rseC
gene_biotype: protein_coding
description:
  SoxR reducing system protein RseC; Involved in the reduction of the SoxR iron-sulfur cluster; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_18755
symbol: rseB
gene_biotype: protein_coding
description:
  Anti-sigma E factor; Periplasmic protein; interacts with the C-terminal domain of RseA and stimulates RseA binding to sigmaE via the cytoplasmic RseA N-terminal domain which then sequesters sigmaE in the membrane thereby preventing sigmaE associated with core RNAP; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_18760
symbol: rseA
gene_biotype: protein_coding
description:
  Anti-sigma factor; An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytoplasmic proteases finish degrading [...]


ensembl_gene_id: LFZ48_18765
symbol: rpoE
gene_biotype: protein_coding
description:
  RNA polymerase subunit sigma; Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this sigma factor is involved in heat shock and oxidative stress response; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: LFZ48_18775
symbol: yfiC
gene_biotype: protein_coding
description:
  tRNA (adenine-N6)-methyltransferase; Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC).


ensembl_gene_id: LFZ48_18780
symbol: srmB
gene_biotype: protein_coding
description:
  ATP-dependent RNA helicase SrmB; DEAD-box RNA helicase involved in the assembly of the 50S ribosomal subunit at low temperature. Exhibits RNA-stimulated ATP hydrolysis and RNA unwinding activity; Belongs to the DEAD box helicase family. SrmB subfamily.


ensembl_gene_id: LFZ48_18785
symbol: grcA
gene_biotype: protein_coding
description:
  Autonomous glycyl radical cofactor GrcA; Acts as a radical domain for damaged PFL and possibly other radical proteins.


ensembl_gene_id: LFZ48_18790
symbol: ung
gene_biotype: protein_coding
description:
  uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.


ensembl_gene_id: LFZ48_18795
symbol: KSB58989.1
gene_biotype: protein_coding
description:
  Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: LFZ48_18800
symbol: trxC
gene_biotype: protein_coding
description:
  Thioredoxin 2; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thioredoxin family.


ensembl_gene_id: LFZ48_18810
symbol: pat
gene_biotype: protein_coding
description:
  Protein acetyltransferase; Catalyzes the acetylation of lysine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_18815
symbol: pssA
gene_biotype: protein_coding
description:
  Catalyzes de novo synthesis of phosphatidylserine from CDP-diacylglycerol and L-serine which leads eventually to the production of phosphatidylethanolamine; bounds to the ribosome; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_18820
symbol: KSB58994.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Required for high salt suppression of motility; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_18825
symbol: KSB58995.1
gene_biotype: protein_coding
description:
  Alpha-ketoglutarate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_18855
symbol: KSB58788.1
gene_biotype: protein_coding
description:
  Thiamine biosynthesis protein ThiJ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_18860
symbol: araH
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: LFZ48_18870
symbol: otsA
gene_biotype: protein_coding
description:
  Trehalose-6-phosphate synthase; Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-alpha-D- glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose- 6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor; Belongs to the glycosyltransferase 20 family.


ensembl_gene_id: LFZ48_18875
symbol: uspC
gene_biotype: protein_coding
description:
  ppGpp-dependent; membrane-associated, stress protein produced under conditions of nutrient deprivation, osmotic shock and oxidative stress; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_18885
symbol: flhD
gene_biotype: protein_coding
description:
  Transcriptional regulator; Functions in complex with FlhC as a master transcriptional regulator that regulates transcription of several flagellar and non- flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways; Belongs to the FlhD family.


ensembl_gene_id: LFZ48_18890
symbol: flhC
gene_biotype: protein_coding
description:
  Transcriptional regulator; Functions in complex with FlhD as a master transcriptional regulator that regulates transcription of several flagellar and non- flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways; Belongs to the FlhC family.


ensembl_gene_id: LFZ48_18895
symbol: motA
gene_biotype: protein_coding
description:
  Flagellar motor protein MotA; With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_18900
symbol: motB
gene_biotype: protein_coding
description:
  Flagellar motor protein MotB; With MotA forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_18905
symbol: KSB58797.1
gene_biotype: protein_coding
description:
  Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_18910
symbol: cheW
gene_biotype: protein_coding
description:
  Chemotaxis protein CheW; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_18920
symbol: KSB58800.1
gene_biotype: protein_coding
description:
  Chemotaxis protein CheR; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP.


ensembl_gene_id: LFZ48_18925
symbol: cheB
gene_biotype: protein_coding
description:
  Chemotaxis protein; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.


ensembl_gene_id: LFZ48_18930
symbol: cheY
gene_biotype: protein_coding
description:
  Chemotaxis protein CheY; Chemotaxis regulator that, when phosphorylated, interacts with the flagellar motor causing the flagella to spin clockwise which causes the cell to tumble; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_18935
symbol: cheZ
gene_biotype: protein_coding
description:
  Chemotaxis protein CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P).


ensembl_gene_id: LFZ48_18940
symbol: flhB
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family.


ensembl_gene_id: LFZ48_18945
symbol: flhA
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.


ensembl_gene_id: LFZ48_18950
symbol: flhe
gene_biotype: protein_coding
description:
  Flagellar protein flhE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_18955
symbol: KSB58807.1
gene_biotype: protein_coding
description:
  Glycosyl hydrolase family 88; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_18960
symbol: mrdA
gene_biotype: protein_coding
description:
  Penicillin-binding protein; Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily.


ensembl_gene_id: LFZ48_18965
symbol: argS
gene_biotype: protein_coding
description:
  arginyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_18980
symbol: cmoB
gene_biotype: protein_coding
description:
  tRNA methyltransferase; Catalyzes carboxymethyl transfer from carboxy-S-adenosyl-L- methionine (Cx-SAM) to 5-hydroxyuridine (ho5U) to form 5- carboxymethoxyuridine (cmo5U) at position 34 in tRNAs.


ensembl_gene_id: LFZ48_18985
symbol: cmoA
gene_biotype: protein_coding
description:
  tRNA methyltransferase; Catalyzes the conversion of S-adenosyl-L-methionine (SAM) to carboxy-S-adenosyl-L-methionine (Cx-SAM).


ensembl_gene_id: LFZ48_19005
symbol: aspS
gene_biotype: protein_coding
description:
  aspartyl-tRNA synthetase; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor end of tRNA(Asp). Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.


ensembl_gene_id: LFZ48_19010
symbol: nudB
gene_biotype: protein_coding
description:
  Catalyzes the formation of dihydroneopterin phosphate from dihydroneopterin triphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_19020
symbol: ruvC
gene_biotype: protein_coding
description:
  Holliday junction resolvase; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.


ensembl_gene_id: LFZ48_19035
symbol: ruvA
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.


ensembl_gene_id: LFZ48_19040
symbol: ruvB
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.


ensembl_gene_id: LFZ48_19045
symbol: znuB
gene_biotype: protein_coding
description:
  High-affinity zinc transporter membrane component; Involved in transport of zinc(II) with ZnuA and C; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_19050
symbol: znuC
gene_biotype: protein_coding
description:
  Zinc ABC transporter ATPase; Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Zinc importer (TC 3.A.1.15.5) family.


ensembl_gene_id: LFZ48_19055
symbol: znuA
gene_biotype: protein_coding
description:
  Zinc ABC transporter substrate-binding protein; Involved in transport of zinc(II) with ZnuA and C; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_19065
symbol: msbB
gene_biotype: protein_coding
description:
  Lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase; Catalyzes the transfer of myristate from myristoyl-acyl carrier protein (ACP) to Kdo(2)-(lauroyl)-lipid IV(A) to form Kdo(2)- lipid A.


ensembl_gene_id: LFZ48_19075
symbol: KSB58831.1
gene_biotype: protein_coding
description:
  Transcriptional regulator; Represses the expression of the zwf, eda, glp and gap; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_19080
symbol: zwf
gene_biotype: protein_coding
description:
  Glucose-6-phosphate dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.


ensembl_gene_id: LFZ48_19085
symbol: edd
gene_biotype: protein_coding
description:
  Phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family.


ensembl_gene_id: LFZ48_19090
symbol: eda
gene_biotype: protein_coding
description:
  Keto-deoxy-phosphogluconate aldolase; Catalyzes the formation of pyruvate and glyoxylate from 4-hydroxy-2-oxoglutarate; or pyruvate and D-glyceraldehyde 3-phosphate from 2-dehydro-3-deoxy-D-glyconate 6-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_19095
symbol: purT
gene_biotype: protein_coding
description:
  Phosphoribosylglycinamide formyltransferase; Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate; Belongs to the PurK/PurT family.


ensembl_gene_id: LFZ48_19100
symbol: KSB58836.1
gene_biotype: protein_coding
description:
  Damage-inducible protein YebG; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_19105
symbol: yebF
gene_biotype: protein_coding
description:
  Secreted protein; unknown function; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_19115
symbol: KSB58839.1
gene_biotype: protein_coding
description:
  Protease 2; PtrB; oligopeptidase that cleaves peptide bonds following arginine and lysine residues; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_19120
symbol: KSB58840.1
gene_biotype: protein_coding
description:
  3'-5' exonuclease activity on single or double-strand DNA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_19125
symbol: KSB58841.1
gene_biotype: protein_coding
description:
  Carbon-nitrogen hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_19130
symbol: KSB58842.1
gene_biotype: protein_coding
description:
  DNA polymerase III subunit theta; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_19165
symbol: KSB58847.1
gene_biotype: protein_coding
description:
  Type III secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_19180
symbol: KSB58850.1
gene_biotype: protein_coding
description:
  Type III secretion protein SopE2; Activator for both CDC42 and RAC1 by directly interacting with these Rho GTPases and acting as a guanine nucleotide exchange factor (GEF). This activation results in actin cytoskeleton rearrangements and stimulates membrane ruffling, thus promoting bacterial entry into non-phagocytic cells. Belongs to the GEF (guanine exchange factor) SopE family.


ensembl_gene_id: LFZ48_19190
symbol: KSB58852.1
gene_biotype: protein_coding
description:
  Serine/threonine protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_19205
symbol: yebU
gene_biotype: protein_coding
description:
  RNA methyltransferase RsmF; Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA.


ensembl_gene_id: LFZ48_19220
symbol: KSB58857.1
gene_biotype: protein_coding
description:
  Free methionine-R-sulfoxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_19230
symbol: KSB58858.1
gene_biotype: protein_coding
description:
  Carboxy-terminal protease; Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S41A family.


ensembl_gene_id: LFZ48_19235
symbol: htpX
gene_biotype: protein_coding
description:
  Heat-shock protein HtpX; Metalloprotease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase M48B family.


ensembl_gene_id: LFZ48_19245
symbol: kdgR
gene_biotype: protein_coding
description:
  Transcriptional regulator; Regulates the genes involved in 2-keto-3-deoxy gluconate transport and catabolism; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_19255
symbol: mgrB
gene_biotype: protein_coding
description:
  Transcriptional regulator; PhoP-regulated transcription is redox-sensitive, being activated when the periplasm becomes more reducing. MgrB acts between DsbA/DsbB and PhoP/PhoQ in this pathway. Represses PhoP/PhoQ signaling, possibly by binding to the periplasmic domain of PhoQ, altering its activity and that of downstream effector PhoP.


ensembl_gene_id: LFZ48_19275
symbol: ftsI-2
gene_biotype: protein_coding
description:
  Peptidoglycan synthase; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum.


ensembl_gene_id: LFZ48_19280
symbol: rrmA
gene_biotype: protein_coding
description:
  Methylates the guanosine in position 745 of 23S rRNA; required for translation and cell growth; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_19285
symbol: mntP
gene_biotype: protein_coding
description:
  Hypothetical protein; Probably functions as a manganese efflux pump. Belongs to the MntP (TC 9.B.29) family.


ensembl_gene_id: LFZ48_19295
symbol: KSB58869.1
gene_biotype: protein_coding
description:
  PTS mannose transporter subunit IID; Hosphoenolpyruvate-dependent sugar phosphotransferase system catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IID with IIC forms the translocation channel; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_19300
symbol: manY_1
gene_biotype: protein_coding
description:
  PTS mannose transporter subunit IIC; Catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; the IIC domain forms the PTS system translocation channel and contains the specific substrate-binding site; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_19305
symbol: ptsL
gene_biotype: protein_coding
description:
  PTS mannose transporter subunit IIAB; Catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; subunit IIA transfers a phosphoryl group to subunit IIB; subunit IIB transfers the phosphoryl group to the substrate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_19325
symbol: kbaY
gene_biotype: protein_coding
description:
  Tagatose-bisphosphate aldolase; Catalyzes the reversible reaction of dihydroxyacetone phosphate with glyceraldehyde 3-phosphate to produce tagatose 1,6-bisphosphate; in enteric bacteria there are two D-tagatose 1,6-bisphosphate-specific aldolases: KbaY (also called AgaY), involved in catabolism of N-acetyl-galactosamine and D-galactosamine, and GatY which is part of the galactitol catabolism pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_19330
symbol: gatZ
gene_biotype: protein_coding
description:
  Tagatose-bisphosphate aldolase; Component of the tagatose-1,6-bisphosphate aldolase GatYZ that is required for full activity and stability of the Y subunit. Could have a chaperone-like function for the proper and stable folding of GatY. When expressed alone, GatZ does not show any aldolase activity. Is involved in the catabolism of galactitol.


ensembl_gene_id: LFZ48_19335
symbol: KSB58639.1
gene_biotype: protein_coding
description:
  PTS galactitol transporter subunit IIA; Phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_19340
symbol: gatB_2
gene_biotype: protein_coding
description:
  PTS galactitol transporter subunit IIB; Phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_19345
symbol: KSB58641.1
gene_biotype: protein_coding
description:
  PTS galactitol transporter subunit IIC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_19350
symbol: KSB58642.1
gene_biotype: protein_coding
description:
  Galactitol-1-phosphate 5-dehydrogenase; Zn-dependent; NAD(P)-binding; catalyzes the formation of tagatose-6-phosphate from galactitol-1-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_19375
symbol: rsmI
gene_biotype: protein_coding
description:
  16S rRNA methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.


ensembl_gene_id: LFZ48_19380
symbol: lpoA
gene_biotype: protein_coding
description:
  Penicillin-binding protein; Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1A (PBP1a). Belongs to the LpoA family.


ensembl_gene_id: LFZ48_19385
symbol: yraN
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0102 family.


ensembl_gene_id: LFZ48_19390
symbol: diaA
gene_biotype: protein_coding
description:
  DnaA initiator-associating protein DiaA; Required for the timely initiation of chromosomal replication via direct interactions with the DnaA initiator protein. Belongs to the SIS family. DiaA subfamily.


ensembl_gene_id: LFZ48_19405
symbol: KSB58653.1
gene_biotype: protein_coding
description:
  General stress protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_19410
symbol: yhbP
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0306 family.


ensembl_gene_id: LFZ48_19415
symbol: yhbQ
gene_biotype: protein_coding
description:
  GIY-YIG nuclease superfamily protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0213 family.


ensembl_gene_id: LFZ48_19445
symbol: KSB58660.1
gene_biotype: protein_coding
description:
  Tryptophan transporter of high affinity; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_19450
symbol: deaD
gene_biotype: protein_coding
description:
  DEAD/DEAH box helicase; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation.


ensembl_gene_id: LFZ48_19460
symbol: pnp
gene_biotype: protein_coding
description:
  Polynucleotide phosphorylase/polyadenylase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.


ensembl_gene_id: LFZ48_19465
symbol: rpsO
gene_biotype: protein_coding
description:
  30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.


ensembl_gene_id: LFZ48_19470
symbol: truB
gene_biotype: protein_coding
description:
  tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.


ensembl_gene_id: LFZ48_19475
symbol: rbfA
gene_biotype: protein_coding
description:
  Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.


ensembl_gene_id: LFZ48_19480
symbol: infB
gene_biotype: protein_coding
description:
  Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.


ensembl_gene_id: LFZ48_19485
symbol: nusA
gene_biotype: protein_coding
description:
  Transcription elongation factor NusA; Participates in both transcription termination and antitermination.


ensembl_gene_id: LFZ48_19490
symbol: rimP
gene_biotype: protein_coding
description:
  Ribosome maturation protein RimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.


ensembl_gene_id: LFZ48_19500
symbol: argG
gene_biotype: protein_coding
description:
  Argininosuccinate synthase; Catalyzes the formation of arginosuccinate from citrulline and aspartate in arginine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the argininosuccinate synthase family. Type 2 subfamily.


ensembl_gene_id: LFZ48_19510
symbol: secG
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.


ensembl_gene_id: LFZ48_19515
symbol: glmM
gene_biotype: protein_coding
description:
  Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.


ensembl_gene_id: LFZ48_19520
symbol: folP
gene_biotype: protein_coding
description:
  Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives.


ensembl_gene_id: LFZ48_19525
symbol: hflB
gene_biotype: protein_coding
description:
  ATP-dependent metalloprotease; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family.  In the central section; belongs to the AAA ATPase family.


ensembl_gene_id: LFZ48_19530
symbol: rrmJ
gene_biotype: protein_coding
description:
  23S rRNA methyltransferase; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit.


ensembl_gene_id: LFZ48_19535
symbol: yhbY
gene_biotype: protein_coding
description:
  RNA binding protein found associated to pre-50S subunit of the ribosome; putative role in ribosome assembly; necessary for optimal growth but not cell viability; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_19540
symbol: greA
gene_biotype: protein_coding
description:
  Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.


ensembl_gene_id: LFZ48_19550
symbol: KSB58676.1
gene_biotype: protein_coding
description:
  D-alanyl-D-alanine carboxypeptidase; Penicillin binding protein 4; penicillin sensitive; catalyzes the formation of D-alanine from D-alanyl-D-alanine; one of four, DD-carboxypeptidase low-molecular weight penicillin-binding proteins that remove terminal D-alanine from pentapeptide side chains; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_19555
symbol: obgE
gene_biotype: protein_coding
description:
  GTPase CgtA; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.


ensembl_gene_id: LFZ48_19565
symbol: rpmA
gene_biotype: protein_coding
description:
  50S ribosomal protein L27; Involved in the peptidyltransferase reaction during translation; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL27 family.


ensembl_gene_id: LFZ48_19570
symbol: rplU
gene_biotype: protein_coding
description:
  50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.


ensembl_gene_id: LFZ48_19575
symbol: KSB58681.1
gene_biotype: protein_coding
description:
  Octaprenyl diphosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FPP/GGPP synthase family.


ensembl_gene_id: LFZ48_19580
symbol: sfsB
gene_biotype: protein_coding
description:
  Transcriptional regulator; Activator of maltose metabolism genes; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_19585
symbol: murA
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.


ensembl_gene_id: LFZ48_19590
symbol: KSB58770.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the BolA/IbaG family.


ensembl_gene_id: LFZ48_19595
symbol: mlaB
gene_biotype: protein_coding
description:
  Phospholipid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_19600
symbol: KSB58685.1
gene_biotype: protein_coding
description:
  ABC transporter substrate-binding protein; Involved in maintaining outer membrane lipid asymmetry; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_19615
symbol: mlaF
gene_biotype: protein_coding
description:
  ABC transporter maintaining outer membrane lipid asymmetry; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_19620
symbol: KSB58689.1
gene_biotype: protein_coding
description:
  Calcium:proton antiporter; YrbG; inner membrane protein involved in cell envelope integrity; putative sodium ion/calcium ion exchanger; in E. coli it is non essential for cell viability; member of the YRBG family of cation/Ca2+ exchangers; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_19625
symbol: KSB58690.1
gene_biotype: protein_coding
description:
  D-arabinose 5-phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_19630
symbol: kdsC
gene_biotype: protein_coding
description:
  3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8- phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate; Belongs to the KdsC family.


ensembl_gene_id: LFZ48_19635
symbol: lptC
gene_biotype: protein_coding
description:
  Lipopolysaccharide transporter; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. Facilitates the transfer of LPS from the inner membrane to the periplasmic protein LptA. Could be a docking site for LptA. Belongs to the LptC family.


ensembl_gene_id: LFZ48_19640
symbol: lptA
gene_biotype: protein_coding
description:
  Lipopolysaccharide transporter; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm.


ensembl_gene_id: LFZ48_19650
symbol: KSB58695.1
gene_biotype: protein_coding
description:
  RNA polymerase factor sigma-54; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: LFZ48_19655
symbol: yhbH
gene_biotype: protein_coding
description:
  YhbH; resting ribosome-binding protein involved in ribosome stabilization and preservation in stationary phase; binds specifically 100S ribosomes (an inactive ribosome product of a 70S ribosome dimerization); seems to be involved in modulation of the sigma(54) (RpoN) activity for quorum sensing; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_19660
symbol: ptsN
gene_biotype: protein_coding
description:
  Transcriptional regulator; Involved in nitrogen metabolism; protein IIA is phosphorylated by enzyme I(Ntr); Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_19665
symbol: rapZ
gene_biotype: protein_coding
description:
  glmZ(sRNA)-inactivating NTPase; Modulates the synthesis of GlmS, by affecting the processing and stability of the regulatory small RNA GlmZ. When glucosamine-6- phosphate (GlcN6P) concentrations are high in the cell, RapZ binds GlmZ and targets it to cleavage by RNase E. Consequently, GlmZ is inactivated and unable to activate GlmS synthesis. Under low GlcN6P concentrations, RapZ is sequestered and inactivated by an other regulatory small RNA, GlmY, preventing GlmZ degradation and leading to synthesis of GlmS; Belongs to the RapZ-like family. RapZ subfamily.


ensembl_gene_id: LFZ48_19670
symbol: ptsO
gene_biotype: protein_coding
description:
  Phosphohistidinoprotein-hexose phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_19680
symbol: mtgA
gene_biotype: protein_coding
description:
  Peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family.


ensembl_gene_id: LFZ48_19685
symbol: KSB58702.1
gene_biotype: protein_coding
description:
  Isoprenoid biosynthesis protein; Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate; Belongs to the peptidase C56 family.


ensembl_gene_id: LFZ48_19690
symbol: KSB58703.1
gene_biotype: protein_coding
description:
  Aerobic respiration control sensor protein ArcB; Sensor-regulator protein which regulates the expression of many genes in response to respiratory growth conditions including anaerobic repression of the arc modulon; hybrid sensory histidine kinase in two-component regulatory system with ArcA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_19705
symbol: gltB
gene_biotype: protein_coding
description:
  Catalyzes the formation of glutamate from glutamine and alpha-ketoglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_19710
symbol: KSB58706.1
gene_biotype: protein_coding
description:
  Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_19720
symbol: codB
gene_biotype: protein_coding
description:
  Cytosine permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_19725
symbol: KSB58709.1
gene_biotype: protein_coding
description:
  Cytosine deaminase; Catalyzes the deamination of cytosine to uracil and ammonia; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_19745
symbol: KSB58713.1
gene_biotype: protein_coding
description:
  Minor fimbrial subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_19770
symbol: nanK
gene_biotype: protein_coding
description:
  N-acetylmannosamine kinase; Catalyzes the phosphorylation of N-acetylmannosamine (ManNAc) to ManNAc-6-P; Belongs to the ROK (NagC/XylR) family. NanK subfamily.


ensembl_gene_id: LFZ48_19775
symbol: nanE
gene_biotype: protein_coding
description:
  N-acetylmannosamine-6-phosphate 2-epimerase; Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N- acetylglucosamine-6-phosphate (GlcNAc-6-P).


ensembl_gene_id: LFZ48_19780
symbol: nanT
gene_biotype: protein_coding
description:
  Sialic acid transporter; Catalyzes the proton-dependent transport of sialic acid. Belongs to the major facilitator superfamily. Sialate:H(+) symporter (SHS) (TC 2.A.1.12) family.


ensembl_gene_id: LFZ48_19785
symbol: nanA
gene_biotype: protein_coding
description:
  N-acetylneuraminate lyase; Catalyzes the reversible aldol cleavage of N-acetylneuraminic acid (sialic acid; Neu5Ac) to form pyruvate and N-acetylmannosamine (ManNAc) via a Schiff base intermediate.


ensembl_gene_id: LFZ48_19790
symbol: nanR
gene_biotype: protein_coding
description:
  Transcriptional regulator NanR; Transcriptional repressor that controls expression of the genes required for the catabolism of sialic acids.


ensembl_gene_id: LFZ48_19795
symbol: sspB
gene_biotype: protein_coding
description:
  Clp protease ClpP; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_19800
symbol: sspA
gene_biotype: protein_coding
description:
  Stringent starvation protein A; Transcriptional activator; required for activation of bacteriophage P1 late promoter; induced by starvation; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GST superfamily.


ensembl_gene_id: LFZ48_19805
symbol: rpsI
gene_biotype: protein_coding
description:
  30S ribosomal protein S9; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS9 family.


ensembl_gene_id: LFZ48_19810
symbol: rplM
gene_biotype: protein_coding
description:
  50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.


ensembl_gene_id: LFZ48_19825
symbol: KSB58729.1
gene_biotype: protein_coding
description:
  Serine endoprotease DegQ; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S1C family.


ensembl_gene_id: LFZ48_19830
symbol: degS
gene_biotype: protein_coding
description:
  Serine endoprotease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_19860
symbol: aaeB
gene_biotype: protein_coding
description:
  P-hydroxybenzoic acid efflux subunit AaeB; Forms an efflux pump with AaeA. Could function as a metabolic relief valve, allowing to eliminate certain compounds when they accumulate to high levels in the cell; Belongs to the aromatic acid exporter ArAE (TC 2.A.85) family.


ensembl_gene_id: LFZ48_19865
symbol: aaeA
gene_biotype: protein_coding
description:
  P-hydroxybenzoic acid efflux subunit AaeA; Forms an efflux pump with AaeB; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: LFZ48_19870
symbol: aaeX
gene_biotype: protein_coding
description:
  Transporter; Membrane protein AaeX; the gene is a member of the aaeXAB operon; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_19875
symbol: aaeR
gene_biotype: protein_coding
description:
  Transcriptional regulator; For aaeXAB operon; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: LFZ48_19880
symbol: tldD
gene_biotype: protein_coding
description:
  Protease TldD; Responsible for the proteolytic maturation of the E. coli pMccB17 plasmid-encoded microcin B17, an exported protein that targets the essential topoisomerase II DNA gyrase; degrades the E. coli plasmid F-encoded CcdA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_19890
symbol: KSB58742.1
gene_biotype: protein_coding
description:
  Involved in the processing of the 5'end of 16S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_19895
symbol: KSB58743.1
gene_biotype: protein_coding
description:
  Septum formation inhibitor Maf; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.


ensembl_gene_id: LFZ48_19900
symbol: mreD
gene_biotype: protein_coding
description:
  Rod shape-determining protein MreD; Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins. Belongs to the MreD family.


ensembl_gene_id: LFZ48_19905
symbol: KSB58745.1
gene_biotype: protein_coding
description:
  Rod shape-determining protein MreC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_19910
symbol: mreB
gene_biotype: protein_coding
description:
  Rod shape-determining protein MreB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_19920
symbol: KSB58748.1
gene_biotype: protein_coding
description:
  Transcriptional regulator; Regulates the degradation of the small RNAs CsrB and CsrC; may function to targate RNase E to specific RNA molecules; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_19930
symbol: msrP
gene_biotype: protein_coding
description:
  TMAO reductase; Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation, including the primary periplasmic chaperone SurA and the lipoprotein Pal. The catalytic subuni [...]


ensembl_gene_id: LFZ48_19935
symbol: msrQ
gene_biotype: protein_coding
description:
  Sulfite oxidase subunit YedZ; Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation, including the primary periplasmic chaperone SurA and the lipoprotein Pal. MsrQ p [...]


ensembl_gene_id: LFZ48_19940
symbol: accB
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: LFZ48_19955
symbol: panF
gene_biotype: protein_coding
description:
  Sodium/panthothenate symporter; Mediates high affinitiy panthothenate transport which is stimulated by the presence of sodium ions; member of SSS family of sodium/solute symporters; the imported panthothenate is phosphorylated by panthothenate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.


ensembl_gene_id: LFZ48_19960
symbol: prmA
gene_biotype: protein_coding
description:
  Ribosomal protein L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family.


ensembl_gene_id: LFZ48_19965
symbol: KSB58757.1
gene_biotype: protein_coding
description:
  Carbonic anhydrase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_19970
symbol: dusB
gene_biotype: protein_coding
description:
  tRNA-dihydrouridine synthase B; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the Dus family. DusB subfamily.


ensembl_gene_id: LFZ48_19975
symbol: fis
gene_biotype: protein_coding
description:
  Fis family transcriptional regulator; Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters; Belongs to the transcriptional regulatory Fis family.


ensembl_gene_id: LFZ48_19980
symbol: KSB58760.1
gene_biotype: protein_coding
description:
  Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the N(4)/N(6)-methyltransferase family.


ensembl_gene_id: LFZ48_20040
symbol: eutA
gene_biotype: protein_coding
description:
  Reactivating factor for ethanolamine ammonia lyase; Ethanolamine utilization protein EutA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_20045
symbol: eutH
gene_biotype: protein_coding
description:
  Ethanolamine utilization protein EutH; May be involved in the transport of ethanolamine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_20050
symbol: KSB58574.1
gene_biotype: protein_coding
description:
  Ethanolamine utilization protein EutG; Aldehyde reductase; catalyzes the conversion of acetaldehyde to ethanol; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_20055
symbol: eutJ
gene_biotype: protein_coding
description:
  Ethanolamine utilization protein EutJ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_20060
symbol: KSB58576.1
gene_biotype: protein_coding
description:
  Aldehyde dehydrogenase; Ethanolamine utilization protein; catalyzes the formation of acetyl-CoA from acetaldehyde; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_20075
symbol: pta
gene_biotype: protein_coding
description:
  Phosphotransacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_20080
symbol: eutT
gene_biotype: protein_coding
description:
  Cobalamin adenosyltransferase; Catalyzes the conversion of cob(I)yrinic acid a,c-diamide to adenosylcob(III)yrinic acid a,c-diamide; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_20085
symbol: eutQ
gene_biotype: protein_coding
description:
  Ethanolamine utilization protein EutQ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_20090
symbol: KSB58613.1
gene_biotype: protein_coding
description:
  Ethanolamine utilization protein EutP; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the EutP/PduV family.


ensembl_gene_id: LFZ48_20110
symbol: maeB
gene_biotype: protein_coding
description:
  Malic enzyme; NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_20135
symbol: nudK
gene_biotype: protein_coding
description:
  GDP-mannose pyrophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_20140
symbol: yfeW
gene_biotype: protein_coding
description:
  Beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S12 family. YfeW subfamily.


ensembl_gene_id: LFZ48_20145
symbol: KSB58592.1
gene_biotype: protein_coding
description:
  (Fe-S)-binding protein; Unknown function; in E. coli the aegA gene is regulated by Fnr, NarXL, and NarQ (but not ArcA), induced under anaerobic conditions and repressed in the presence of nitrate (anaerobic); Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_20150
symbol: KSB58593.1
gene_biotype: protein_coding
description:
  Nitrate/nitrite sensor protein NarQ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_20160
symbol: KSB58595.1
gene_biotype: protein_coding
description:
  Reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ArsC family.


ensembl_gene_id: LFZ48_20165
symbol: dapE
gene_biotype: protein_coding
description:
  Succinyl-diaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily.


ensembl_gene_id: LFZ48_20175
symbol: tmcA
gene_biotype: protein_coding
description:
  Methionine tRNA cytidine acetyltransferase; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of tRNA(Met), by using acetyl-CoA as an acetyl donor and ATP (or GTP).


ensembl_gene_id: LFZ48_20185
symbol: purC
gene_biotype: protein_coding
description:
  Phosphoribosylaminoimidazole-succinocarboxamide synthase; Catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_20190
symbol: bamC
gene_biotype: protein_coding
description:
  Hypothetical protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.


ensembl_gene_id: LFZ48_20195
symbol: dapA
gene_biotype: protein_coding
description:
  Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).


ensembl_gene_id: LFZ48_20200
symbol: gcvR
gene_biotype: protein_coding
description:
  Glycine cleavage system transcriptional repressor; Negative transcriptional regulator of the gcvTHP operon; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_20205
symbol: bcp
gene_biotype: protein_coding
description:
  Thiol peroxidase; Bacterioferritin comigratory protein; thiol peroxidase; thioredoxin-dependent; hydroperoxide peroxidase; in Escherichia coli this enzyme preferentially reduces linoleic acid hydroperoxide; contains an active site cysteine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_20215
symbol: KSB58606.1
gene_biotype: protein_coding
description:
  Gluconate:proton symporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_20230
symbol: bepA
gene_biotype: protein_coding
description:
  Hypothetical protein; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state.


ensembl_gene_id: LFZ48_20235
symbol: arsC
gene_biotype: protein_coding
description:
  Arsenate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_20240
symbol: hda
gene_biotype: protein_coding
description:
  DNA replication initiation factor; Mediates the interaction of DNA replication inititator protein DnaA with DNA polymerase subunit beta sliding clamp (dnaN). Stimulates hydrolysis of ATP-DnaA to ADP-DnaA, rendering DnaA inactive for reinititation, a process called regulatory inhibition of DnaA or RIDA; Belongs to the DnaA family. HdA subfamily.


ensembl_gene_id: LFZ48_20245
symbol: KSB58612.1
gene_biotype: protein_coding
description:
  Uracil transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_20260
symbol: purH
gene_biotype: protein_coding
description:
  Phosphoribosylaminoimidazolecarboxamide formyltransferase; Involved in de novo purine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_20265
symbol: purD
gene_biotype: protein_coding
description:
  Phosphoribosylamine--glycine ligase; Catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_20270
symbol: KSB58537.1
gene_biotype: protein_coding
description:
  DNA-binding response regulator in two-component regulatory system with ZraS; response regulator/sigma54 interaction protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_20275
symbol: KSB58538.1
gene_biotype: protein_coding
description:
  Sensor protein ZraS; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_20280
symbol: zraP
gene_biotype: protein_coding
description:
  Zinc resistance protein; Binds zinc. Could be an important component of the zinc- balancing mechanism; Belongs to the ZraP family.


ensembl_gene_id: LFZ48_20290
symbol: hupA
gene_biotype: protein_coding
description:
  DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.


ensembl_gene_id: LFZ48_20300
symbol: nfi
gene_biotype: protein_coding
description:
  Endonuclease V; DNA repair enzyme involved in the repair of deaminated bases. Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA.


ensembl_gene_id: LFZ48_20305
symbol: hemE
gene_biotype: protein_coding
description:
  Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.


ensembl_gene_id: LFZ48_20310
symbol: nudC
gene_biotype: protein_coding
description:
  NADH pyrophosphatase; Can catalyze hydrolysis of broad range of dinucleotide pyrophosphates but prefers reduced form of NADH; requires divalent metal ions such as magnesium and manganese and produces two mononucleoside 5'-phosphates; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Nudix hydrolase family. NudC subfamily.


ensembl_gene_id: LFZ48_20315
symbol: rsd
gene_biotype: protein_coding
description:
  Anti-sigma factor; Binds RpoD and negatively regulates RpoD-mediated transcription activation by preventing the interaction between the primary sigma factor RpoD with the catalytic core of the RNA polymerase and with promoter DNA. May be involved in replacement of the RNA polymerase sigma subunit from RpoD to RpoS during the transition from exponential growth to the stationary phase.


ensembl_gene_id: LFZ48_20320
symbol: thiC
gene_biotype: protein_coding
description:
  Thiamine biosynthesis protein ThiC; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction.


ensembl_gene_id: LFZ48_20325
symbol: thiE
gene_biotype: protein_coding
description:
  Thiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.


ensembl_gene_id: LFZ48_20330
symbol: KSB58549.1
gene_biotype: protein_coding
description:
  Molybdopterin biosynthesis protein MoeB; ATP-dependent adenylate transferase, transfers adenyl moiety to the MoeD subunit of molybdopterin synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_20335
symbol: KSB58550.1
gene_biotype: protein_coding
description:
  Thiamine biosynthesis protein ThiS; With ThiF, ThiG, and ThiO catalyzes the formation of the thiazole moiety of thiamine pyrophosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_20340
symbol: thiG
gene_biotype: protein_coding
description:
  Thiazole synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.


ensembl_gene_id: LFZ48_20345
symbol: thiH
gene_biotype: protein_coding
description:
  In Escherichia coli this enzyme functions in thiamine biosynthesis along with thiFSGI and iscS; with ThiFSG catalyzes the formation of thiazole phosphate from tyrosine, cysteine and 1-deoxy-D-xylulose-5-phosphate; forms a complex with ThiG; contains an iron-sulfur center; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_20355
symbol: rpoC
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: LFZ48_20365
symbol: rplL
gene_biotype: protein_coding
description:
  50S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.


ensembl_gene_id: LFZ48_20370
symbol: rplJ
gene_biotype: protein_coding
description:
  50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.


ensembl_gene_id: LFZ48_20375
symbol: rplA
gene_biotype: protein_coding
description:
  50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.


ensembl_gene_id: LFZ48_20380
symbol: rplK
gene_biotype: protein_coding
description:
  50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.


ensembl_gene_id: LFZ48_20385
symbol: nusG
gene_biotype: protein_coding
description:
  Transcription antiterminator NusG; Participates in transcription elongation, termination and antitermination. In the absence of Rho, increases the rate of transcription elongation by the RNA polymerase (RNAP), probably by partially suppressing pausing. In the presence of Rho, modulates most Rho-dependent termination events by interacting with the RNAP to render the complex more susceptible to the termination activity of Rho. May be required to overcome a kinetic limitation of Rho to function at certain terminators. Also involved in ribosomal RNA transcriptional antitermination; Belongs [...]


ensembl_gene_id: LFZ48_20390
symbol: secE
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation; Belongs to the SecE/SEC61-gamma family.


ensembl_gene_id: LFZ48_20425
symbol: coaA
gene_biotype: protein_coding
description:
  Pantothenate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_20430
symbol: birA
gene_biotype: protein_coding
description:
  biotin--[acetyl-CoA-carboxylase] synthetase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio-5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon.


ensembl_gene_id: LFZ48_20455
symbol: hycD
gene_biotype: protein_coding
description:
  Hydrogenase 3 membrane subunit; Formate hydrogenlyase subunit 4; HycBCDEFG is part of the formate hydrogenlyase system which is involved in the cleaving of formate to dihydrogen and carbon dioxide; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_20460
symbol: KSB57916.1
gene_biotype: protein_coding
description:
  Formate hydrogenlyase subunit 3; Catalyzes the oxidation of formate to carbon dioxide and molecular hydrogen; formate hydrogenlyase comprises of a formate dehydrogenase, unidentified electron carriers and a hydrogenase (subunit 3); Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_20465
symbol: KSB57917.1
gene_biotype: protein_coding
description:
  Formate hydrogenlyase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_20470
symbol: hycA
gene_biotype: protein_coding
description:
  Transcriptional regulator; Regulates several genes involved in the formate hydrogenlyase system; seems to prevent binding of FhlA transcriptional activator to the activator sequence of hyc operon; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_20480
symbol: hypB
gene_biotype: protein_coding
description:
  Hydrogenase nickel incorporation protein HypB; GTP hydrolase involved in nickel liganding into hydrogenases; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_20485
symbol: hypC-2
gene_biotype: protein_coding
description:
  Hydrogenase assembly chaperone; HypC; accessory protein necessary for maturation of the hydrogenase isoforms 1, 2 and 3; forms a complex with HypD, HypE, and HypF proteins, which is the site of ligand biosynthesis and attachment to the iron atom of the NiFe site in the hydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_20490
symbol: hypD
gene_biotype: protein_coding
description:
  Hydrogenase isoenzyme formation protein HypD; Necessary for the synthesis of all three hydrogenase isoenzymes; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HypD family.


ensembl_gene_id: LFZ48_20495
symbol: hypE
gene_biotype: protein_coding
description:
  Carbamoyl dehydratase HypE; Hydrogenase isoenzymes formation protein; involved in the formation of the cyanate group of the large subunit of the hydrogenase; catalyzes the formation of thiocyanate from thiocarbamate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_20500
symbol: flhA-2
gene_biotype: protein_coding
description:
  Transcriptional regulator; Regulates the expression of formate dehydrogenase H and hydrogenase-3 structural genes; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_20510
symbol: KSB57926.1
gene_biotype: protein_coding
description:
  Iron ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 9 family.


ensembl_gene_id: LFZ48_20515
symbol: KSB57927.1
gene_biotype: protein_coding
description:
  Manganese/iron transporter ATP-binding protein; With SitACD is involved in the transport of manganese and iron; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_20525
symbol: KSB57929.1
gene_biotype: protein_coding
description:
  Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_20535
symbol: KSB57930.1
gene_biotype: protein_coding
description:
  Transcriptional regulator; Activates Salmonella pathogenicity island 4 genes and weakly represses Salmonella pathogenicity island 1 genes; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_20540
symbol: sirC
gene_biotype: protein_coding
description:
  Transcriptional regulator SirC; Regulates the expression of the invasion-associated type III secretion system in Salmonella pathogenicity island 1; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_20545
symbol: KSB57932.1
gene_biotype: protein_coding
description:
  Type III secretion system effector protein OrgC; Expressed during and after host cell invasion; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_20550
symbol: KSB57933.1
gene_biotype: protein_coding
description:
  Invasion protein OrgB; Oxygen regulated; required for internalization into the host cell; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_20555
symbol: KSB57934.1
gene_biotype: protein_coding
description:
  Invasion protein OrgA; Oxygen regulated; required for internalization into the host cell; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_20565
symbol: prgJ
gene_biotype: protein_coding
description:
  Type III secretion system protein PrgJ; May be involved in capping the needle substructure; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_20570
symbol: KSB57937.1
gene_biotype: protein_coding
description:
  Type III secretion system protein PrgI; With InvG, PrgH, and Prg K makes up the membrane spanning needle complex; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_20575
symbol: prgH
gene_biotype: protein_coding
description:
  Type III secretion system protein PrgH; With InvG, PrgI, and Prg K makes up the membrane spanning needle complex; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_20580
symbol: hilD
gene_biotype: protein_coding
description:
  Transcriptional regulator HilD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_20585
symbol: KSB57940.1
gene_biotype: protein_coding
description:
  Invasion protein regulator; IagA; HilA; activates the expression of invasion genes and activates the expression of prgHIJK which is part of the pathogenicity island 1 type III secretion system; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_20590
symbol: iagB
gene_biotype: protein_coding
description:
  Invasion protein IagB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_20595
symbol: KSB57942.1
gene_biotype: protein_coding
description:
  Pathogenicity island 1 effector protein StpP; GTP-activating protein/tyrosine phosphatase; facilitates bacterial survival in host cells; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_20600
symbol: sicP
gene_biotype: protein_coding
description:
  Chaperone protein SicP; Type III secretion system chaperone; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_20610
symbol: iacP
gene_biotype: protein_coding
description:
  Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.


ensembl_gene_id: LFZ48_20615
symbol: KSB57946.1
gene_biotype: protein_coding
description:
  Pathogenicity island 1 effector protein SipA; Cell invasion protein A; actin-binding; required for entry of the Salmonella into the host cell; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_20620
symbol: sipD
gene_biotype: protein_coding
description:
  Cell invasion protein SipD; Involved in the transport of effector protein by the type III secretion system of Salmonella pathogenicity island 1; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_20625
symbol: KSB57948.1
gene_biotype: protein_coding
description:
  Pathogenicity island 1 effector protein SipC; Cell invasion protein C; required for entry of the bacteria into the host cell; binds to actin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_20630
symbol: sipB
gene_biotype: protein_coding
description:
  Pathogenicity island 1 effector protein SipB; Cell invasion protein B; required for entry of the bacteria into the host cell; induces apoptosis in macrophages; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_20635
symbol: sicA
gene_biotype: protein_coding
description:
  Chaperone protein SicA; Surface presentation of antigen protein SpaT; involved in the stabilization of SipB and SipC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_20640
symbol: spaS
gene_biotype: protein_coding
description:
  Type III secretion system protein SpaS; Required for surface presentation of invasion plasmid antigens; required for invasion and for secretion of the three ipa proteins; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_20645
symbol: spaR
gene_biotype: protein_coding
description:
  Type III secretion system protein SpaR; Involved in the surface presentation of antigens needed for the invasion of Salmonella into host cells; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_20650
symbol: spaQ
gene_biotype: protein_coding
description:
  Type III secretion system protein SpaQ; Involved in the surface presentation of antigens needed for the invasion of Salmonella into host cells; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_20660
symbol: spaO
gene_biotype: protein_coding
description:
  Type III secretion system protein SpaO; Involved in a secretory pathway responsible for the surface presentation of determinants needed for the entry of Salmonella species into mammalian cells; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_20665
symbol: spaN
gene_biotype: protein_coding
description:
  Involved in the surface presentation of antigens needed for the invasion of Salmonella into host cells; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_20670
symbol: spaM
gene_biotype: protein_coding
description:
  Type III secretion system protein SpaM; Involved in a secretory pathway responsible for the surface presentation of determinants needed for the entry of Salmonella species into mammalian cells; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_20675
symbol: KSB57958.1
gene_biotype: protein_coding
description:
  ATP synthase; Invasion protein InvC; necessary for efficient entry of S.typhimurium into cultured epithelial cells; probable catalytic subunit of a protein translocase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_20680
symbol: spaK
gene_biotype: protein_coding
description:
  Type III secretion system chaperone SpaK; Involved in a secretory pathway responsible for the surface presentation of determinants needed for the entry of Salmonella species into mammalian cells; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_20685
symbol: invA
gene_biotype: protein_coding
description:
  Type III secretion system protein InvA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_20690
symbol: invE
gene_biotype: protein_coding
description:
  Type III secretion system regulator InvE; Involved in regulation of genes necessary for the entry of Salmonella into host cells; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_20695
symbol: invG
gene_biotype: protein_coding
description:
  Type III secretion system outer membrane pore InvG; May be involved in the export or assemby of proteins involved in the entry of Salmonella into host cells; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_20700
symbol: invF
gene_biotype: protein_coding
description:
  Transcriptional regulator InvF; Involved in the expression of virulence genes; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_20705
symbol: KSB57964.1
gene_biotype: protein_coding
description:
  Invasion lipoprotein InvH; Involved in the secretion and localization proteins necessary for the entry of Salmonella into host cells; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_20710
symbol: mutS
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.


ensembl_gene_id: LFZ48_20725
symbol: KSB57968.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the hyi family.


ensembl_gene_id: LFZ48_20730
symbol: KSB57969.1
gene_biotype: protein_coding
description:
  Aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_20740
symbol: KSB57971.1
gene_biotype: protein_coding
description:
  3-hydroxyisobutyrate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_20755
symbol: KSB57974.1
gene_biotype: protein_coding
description:
  Phenolic acid decarboxylase; Involved in the non-oxidative decarboxylation and detoxification of phenolic derivatives. Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for phenolic acid decarboxylase.


ensembl_gene_id: LFZ48_20760
symbol: KSB57975.1
gene_biotype: protein_coding
description:
  Phenolic acid decarboxylase; Involved in the non-oxidative decarboxylation and detoxification of phenolic derivatives.


ensembl_gene_id: LFZ48_20765
symbol: bsdD
gene_biotype: protein_coding
description:
  4-hydroxybenzoate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_20770
symbol: rpoS
gene_biotype: protein_coding
description:
  RNA polymerase subunit sigma; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the master transcriptional regulator of the stationary phase and the general stress response.


ensembl_gene_id: LFZ48_20775
symbol: nlpD
gene_biotype: protein_coding
description:
  Outer membrane lipoprotein involved in stationary-phase cell survival; similar to LppB virulence determinant from Haemophilus somnus; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_20780
symbol: pcm
gene_biotype: protein_coding
description:
  protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins.


ensembl_gene_id: LFZ48_20785
symbol: surE
gene_biotype: protein_coding
description:
  Stationary phase survival protein SurE; Nucleotidase with a broad substrate specificity as it can dephosphorylate various ribo- and deoxyribonucleoside 5'-monophosphates and ribonucleoside 3'-monophosphates with highest affinity to 3'-AMP. Also hydrolyzes polyphosphate (exopolyphosphatase activity) with the preference for short-chain-length substrates (P20-25). Might be involved in the regulation of dNTP and NTP pools, and in the turnover of 3'-mononucleotides produced by numerous intracellular RNases (T1, T2, and F) during the degradation of various RNAs.


ensembl_gene_id: LFZ48_20790
symbol: truD
gene_biotype: protein_coding
description:
  tRNA pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil-13 in transfer RNAs; Belongs to the pseudouridine synthase TruD family.


ensembl_gene_id: LFZ48_20795
symbol: ispF
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP).


ensembl_gene_id: LFZ48_20800
symbol: ispD
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP). Belongs to the IspD/TarI cytidylyltransferase family. IspD subfamily.


ensembl_gene_id: LFZ48_20805
symbol: ftsB
gene_biotype: protein_coding
description:
  Cell division protein FtsB; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic.


ensembl_gene_id: LFZ48_20820
symbol: cysN
gene_biotype: protein_coding
description:
  Sulfate adenylyltransferase subunit 1; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.


ensembl_gene_id: LFZ48_20825
symbol: cysD
gene_biotype: protein_coding
description:
  Sulfate adenylyltransferase subunit 2; With CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_20830
symbol: KSB57989.1
gene_biotype: protein_coding
description:
  Alkaline phosphatase; Catalyzes the sequential removal of 2 amino-terminal arginines from alkaline phosphatase isozyme 1 to form isozymes 2 and 3; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_20835
symbol: KSB57990.1
gene_biotype: protein_coding
description:
  Single-stranded DNA endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_20840
symbol: cas1e
gene_biotype: protein_coding
description:
  CRISPR-associated protein Cas1; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.


ensembl_gene_id: LFZ48_20845
symbol: KSB57992.1
gene_biotype: protein_coding
description:
  CRISPR-associated protein Cas6; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_20855
symbol: KSB57994.1
gene_biotype: protein_coding
description:
  CRISPR-associated protein Cse4; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_20865
symbol: KSB57996.1
gene_biotype: protein_coding
description:
  CRISPR-associated protein CasA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_20870
symbol: KSB57997.1
gene_biotype: protein_coding
description:
  Helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_20875
symbol: KSB57998.1
gene_biotype: protein_coding
description:
  Pathogenicity island 1 effector protein SopD; Involved in bacterial survival in the host cell; involved in macrophage replication; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_20880
symbol: cysH
gene_biotype: protein_coding
description:
  Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.


ensembl_gene_id: LFZ48_20885
symbol: cysI
gene_biotype: protein_coding
description:
  Sulfite reductase subunit beta; Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L-cysteine from sulfate. Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.


ensembl_gene_id: LFZ48_20890
symbol: cysJ
gene_biotype: protein_coding
description:
  Sulfite reductase subunit alpha; Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L-cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH -> FAD -> FMN to the hemoprotein component. Belongs to the NADPH-dependent sulphite reductase flavoprotein subunit CysJ family. In the N-terminal section; belongs to the flavodoxin family.


ensembl_gene_id: LFZ48_20895
symbol: queD
gene_biotype: protein_coding
description:
  6-carboxy-5,6,7,8-tetrahydropterin synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_20900
symbol: KSB58003.1
gene_biotype: protein_coding
description:
  Beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_20905
symbol: queE
gene_biotype: protein_coding
description:
  Pyrroloquinoline quinone biosynthesis protein; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds.


ensembl_gene_id: LFZ48_20910
symbol: eno
gene_biotype: protein_coding
description:
  Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis.


ensembl_gene_id: LFZ48_20940
symbol: KSB57459.1
gene_biotype: protein_coding
description:
  Serine dehydratase; Catalyzes the formation of 2-oxobutanoate from L-threonine or the formation of pyruvate from serine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_20960
symbol: fljB
gene_biotype: protein_coding
description:
  Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.


ensembl_gene_id: LFZ48_20965
symbol: hin
gene_biotype: protein_coding
description:
  DNA-invertase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_20975
symbol: KSB57465.1
gene_biotype: protein_coding
description:
  Multidrug ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_20980
symbol: KSB57466.1
gene_biotype: protein_coding
description:
  Enterochelin esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_20995
symbol: KSB57469.1
gene_biotype: protein_coding
description:
  Effector protein PipB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_21005
symbol: KSB57471.1
gene_biotype: protein_coding
description:
  VirG localization protein VirK; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_21010
symbol: KSB57472.1
gene_biotype: protein_coding
description:
  Induced within macrophages; necessary for the resistance to antimicrobials; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_21030
symbol: tctD
gene_biotype: protein_coding
description:
  Transcriptional activator of tricarboxylate transport system genes; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_21040
symbol: KSB57478.1
gene_biotype: protein_coding
description:
  Tricarboxylic transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_21050
symbol: KSB57480.1
gene_biotype: protein_coding
description:
  Tripartite tricarboxylate transporter TctA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_21055
symbol: csiD
gene_biotype: protein_coding
description:
  Carbon starvation induced protein; Acts as an alpha-ketoglutarate-dependent dioxygenase catalyzing hydroxylation of glutarate (GA) to L-2-hydroxyglutarate (L2HG). Functions in a L-lysine degradation pathway that proceeds via cadaverine, glutarate and L-2-hydroxyglutarate.


ensembl_gene_id: LFZ48_21060
symbol: lhgD
gene_biotype: protein_coding
description:
  Hydroxyglutarate oxidase; Catalyzes the dehydrogenation of L-2-hydroxyglutarate (L2HG) to alpha-ketoglutarate and couples to the respiratory chain by feeding electrons from the reaction into the membrane quinone pool. Functions in a L-lysine degradation pathway that proceeds via cadaverine, glutarate and L-2-hydroxyglutarate. Reaction=(S)-2-hydroxyglutarate + a quinone = 2-oxoglutarate + a quinol; Xref=Rhea:RHEA:58664, ChEBI:CHEBI:16782, ChEBI:CHEBI:16810, ChEBI:CHEBI:24646, ChEBI:CHEBI:132124; PhysiologicalDirection=left-to-right; Xref=Rhea:RHEA:58665; Belongs to the L2HGDH family.


ensembl_gene_id: LFZ48_21065
symbol: gabD
gene_biotype: protein_coding
description:
  Succinate-semialdehyde dehydrogenase; Catalyzes the formation of succinate from succinate semialdehyde; NADP dependent; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_21070
symbol: KSB57484.1
gene_biotype: protein_coding
description:
  4-aminobutyrate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: LFZ48_21075
symbol: KSB57485.1
gene_biotype: protein_coding
description:
  Gamma-aminobutyrate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_21080
symbol: csiR
gene_biotype: protein_coding
description:
  Regulator of gab gene expression; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_21085
symbol: lysM
gene_biotype: protein_coding
description:
  Peptidoglycan-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_21110
symbol: stpA
gene_biotype: protein_coding
description:
  DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the histone-like protein H-NS family.


ensembl_gene_id: LFZ48_21135
symbol: KSB57497.1
gene_biotype: protein_coding
description:
  Alkylhydroperoxidase; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.


ensembl_gene_id: LFZ48_21150
symbol: nrdI
gene_biotype: protein_coding
description:
  Ribonucleotide reductase stimulatory protein; Probably involved in ribonucleotide reductase function.


ensembl_gene_id: LFZ48_21155
symbol: KSB57501.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.


ensembl_gene_id: LFZ48_21160
symbol: nrdF
gene_biotype: protein_coding
description:
  Ribonucleotide-diphosphate reductase subunit beta; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family.


ensembl_gene_id: LFZ48_21165
symbol: proV
gene_biotype: protein_coding
description:
  Glycine/betaine ABC transporter ATP-binding protein; With ProWX is involved in the high-affinity uptake of glycine betaine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_21170
symbol: proW
gene_biotype: protein_coding
description:
  Glycine/betaine ABC transporter permease; With ProVX is involved in the high-affinity uptake of glycine betaine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_21175
symbol: proX
gene_biotype: protein_coding
description:
  Glycine/betaine ABC transporter substrate-binding protein; With ProVW, part of the high-affinity transport system for the osmoprotectant glycine betaine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_21185
symbol: mprA
gene_biotype: protein_coding
description:
  DNA-binding transcriptional repressor of microcin B17 synthesis and multidrug efflux; negative regulator of the multidrug operon emrAB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_21190
symbol: emrA
gene_biotype: protein_coding
description:
  With ErmA and TolC forms a multidrug efflux system; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_21195
symbol: emrB
gene_biotype: protein_coding
description:
  Multidrug resistance protein B; Multidrug MFS transporte; with EmrA is involved in resistance to hydrophobic antibiotics such as nalidixic acid; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the major facilitator superfamily.


ensembl_gene_id: LFZ48_21200
symbol: KSB57510.1
gene_biotype: protein_coding
description:
  2'-5' RNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_21205
symbol: KSB57511.1
gene_biotype: protein_coding
description:
  poly(A) polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_21215
symbol: luxS
gene_biotype: protein_coding
description:
  S-ribosylhomocysteinase; Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5-dihydroxy-2,3-pentadione (DPD). Belongs to the LuxS family.


ensembl_gene_id: LFZ48_21220
symbol: gshA
gene_biotype: protein_coding
description:
  Glutamate--cysteine ligase; Involved in the first step of glutathione biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily.


ensembl_gene_id: LFZ48_21230
symbol: KSB57516.1
gene_biotype: protein_coding
description:
  6-phosphogluconate phosphatase; YqaB; catalyzes the dephosphorylation of fructose 1-phosphate, 6-phosphogluconate and p-nitrophenyl phosphate (pNPP); presents beta-phosphoglucomutase activity at a lower extent; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_21260
symbol: csrA
gene_biotype: protein_coding
description:
  Carbon storage regulator; A key translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Mediates global changes in gene expression, shifting from rapid growth to stress survival by linking envelope stress, the stringent response and the catabolite repression systems. Usually binds in the 5'-UTR; binding at or near the Shine-Dalgarno sequence prevents ribosome-binding, repressing translation, binding elsewhere in the 5'-UTR can activate translation and/or stabilize the mRNA. Its function is antagonized by small RNA(s).


ensembl_gene_id: LFZ48_21265
symbol: alaS
gene_biotype: protein_coding
description:
  alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain; Belongs to the class-II aminoacyl-tRNA synthetase family.


ensembl_gene_id: LFZ48_21275
symbol: recA
gene_biotype: protein_coding
description:
  Recombinase A; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs.


ensembl_gene_id: LFZ48_21290
symbol: KSB57522.1
gene_biotype: protein_coding
description:
  Murein hydrolase effector LrgB; Membrane-bound lytic murein transglycosylase B; catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N-acetylglucosamine in peptidoglycan; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_21295
symbol: srlA
gene_biotype: protein_coding
description:
  PTS glucitol/sorbitol transporter subunit IIC; Catalyzes the phosphorylation of incoming sugar substrates along with their translocation across the cell membrane; the IIC domain forms the PTS system translocation channel and contains the specific substrate-binding site; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_21300
symbol: srlE
gene_biotype: protein_coding
description:
  PTS glucitol/sorbitol transporter subunit IIB; Catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; subunit IIB transfers the phosphoryl group to the substrate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_21305
symbol: KSB57525.1
gene_biotype: protein_coding
description:
  PTS glucitol/sorbitol transporter subunit IIA; Phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_21310
symbol: KSB57526.1
gene_biotype: protein_coding
description:
  Sorbitol-6-phosphate 2-dehydrogenase; Catalyzes the conversion of sorbitol 6-phosphate into fructose 6-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: LFZ48_21315
symbol: KSB57527.1
gene_biotype: protein_coding
description:
  Regulator for glucitol utilization; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_21320
symbol: srlR
gene_biotype: protein_coding
description:
  Transcriptional regulator; Regulates genes involved in glucitol utilization; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_21325
symbol: KSB57529.1
gene_biotype: protein_coding
description:
  Arabinose 5-phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_21330
symbol: norR
gene_biotype: protein_coding
description:
  Transcriptional regulator; Required for the expression of anaerobic nitric oxide (NO) reductase, acts as a transcriptional activator for at least the norVW operon. Activation also requires sigma-54.


ensembl_gene_id: LFZ48_21335
symbol: norV
gene_biotype: protein_coding
description:
  Nitric oxide reductase; Anaerobic nitric oxide reductase; uses NADH to detoxify nitric oxide (NO), protecting several 4Fe-4S NO-sensitive enzymes. Has at least 2 reductase partners, only one of which (NorW, flavorubredoxin reductase) has been identified. NO probably binds to the di-iron center; electrons enter from the NorW at rubredoxin and are transferred sequentially to the FMN center and the di-iron center. Also able to function as an aerobic oxygen reductase; In the N-terminal section; belongs to the zinc metallo- hydrolase group 3 family.


ensembl_gene_id: LFZ48_21340
symbol: norW
gene_biotype: protein_coding
description:
  NADH:flavorubredoxin oxidoreductase; One of at least two accessory proteins for anaerobic nitric oxide (NO) reductase. Reduces the rubredoxin moiety of NO reductase.


ensembl_gene_id: LFZ48_21345
symbol: hypF
gene_biotype: protein_coding
description:
  Carbamoyl phosphate phosphatase; Involved in the maturation of [NiFe] hydrogenases. Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of [NiFe]-hydrogenases. HypF functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide.


ensembl_gene_id: LFZ48_21350
symbol: hydN_2
gene_biotype: protein_coding
description:
  Formate dehydrogenase; Involved in electron transport from formate to hydrogen; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_21360
symbol: hycI
gene_biotype: protein_coding
description:
  Hydrogenase 3 maturation protease; Involved in the C-terminal processing of the large subunit of hydrogenase 3 HycE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_21365
symbol: KSB57537.1
gene_biotype: protein_coding
description:
  Required for the maturation of the formate hydrogenlyase complex; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_21375
symbol: KSB57539.1
gene_biotype: protein_coding
description:
  Electron transfer protein for hydrogenase-3; the formate hydrogenlyase complex comprises of a formate dehydrogenase, unidentified electron carriers and hydrogenase-3; in this non-energy conserving pathway, molecular hydrogen and carbodioxide are released from formate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_21380
symbol: hycE
gene_biotype: protein_coding
description:
  Hydrogenase 3 large subunit; Formate hydrogenlyase subunit 5; HycBCDEFG is part of the formate hydrogenlyase system which is involved in the cleaving of formate to dihydrogen and carbon dioxide; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_21395
symbol: sapD
gene_biotype: protein_coding
description:
  Peptide ABC transporter ATP-binding protein; Involved in resistance to antimibial peptides; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.


ensembl_gene_id: LFZ48_21405
symbol: KSB56875.1
gene_biotype: protein_coding
description:
  Diguanylate phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_21425
symbol: fabI
gene_biotype: protein_coding
description:
  enoyl-ACP reductase; Catalyzes a key regulatory step in fatty acid biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_21435
symbol: rnb
gene_biotype: protein_coding
description:
  Exoribonuclease II; Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction.


ensembl_gene_id: LFZ48_21440
symbol: KSB56879.1
gene_biotype: protein_coding
description:
  RNase II stability modulator; c-di-GMP phosphodiesterase; probably degrades signalling molecule c-di-GMP; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_21445
symbol: SBOV17211
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0509 family.


ensembl_gene_id: LFZ48_21460
symbol: yciH
gene_biotype: protein_coding
description:
  Translation initiation factor Sui1; Involved in start site selection during the initiation of translation; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_21465
symbol: pyrF
gene_biotype: protein_coding
description:
  Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily.


ensembl_gene_id: LFZ48_21470
symbol: lapB
gene_biotype: protein_coding
description:
  Hypothetical protein; Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane; Belongs to the LapB family.


ensembl_gene_id: LFZ48_21475
symbol: lapA
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in the assembly of lipopolysaccharide (LPS). Belongs to the LapA family.


ensembl_gene_id: LFZ48_21480
symbol: KSB56887.1
gene_biotype: protein_coding
description:
  Phosphatidylglycerophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_21485
symbol: ribA
gene_biotype: protein_coding
description:
  GTP cyclohydrolase; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate.


ensembl_gene_id: LFZ48_21505
symbol: cysB
gene_biotype: protein_coding
description:
  LysR-type transcriptional regulator; contains helix-turn-helix (HTH) motif; in Escherichia coli this protein regulates cysteine biosynthesis by controlling expression of the cys regulon; autoregulates expression; crystal structure of Klebsiella aerogenes showed tetramer formation; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_21510
symbol: topA
gene_biotype: protein_coding
description:
  DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]


ensembl_gene_id: LFZ48_21520
symbol: KSB56895.1
gene_biotype: protein_coding
description:
  Peptidase; Multicopy suppressor of htrA(degP); Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_21525
symbol: KSB56896.1
gene_biotype: protein_coding
description:
  3-oxoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_21530
symbol: cobO
gene_biotype: protein_coding
description:
  cob(I)alamin adenolsyltransferase/cobinamide ATP-dependent adenolsyltransferase; Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids.


ensembl_gene_id: LFZ48_21535
symbol: rluB
gene_biotype: protein_coding
description:
  23S rRNA pseudouridylate synthase; Catalyzes the synthesis of pseudouridine from uracil-2605 in 23S ribosomal RNA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pseudouridine synthase RsuA family.


ensembl_gene_id: LFZ48_21540
symbol: yciO
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SUA5 family.


ensembl_gene_id: LFZ48_21545
symbol: KSB56900.1
gene_biotype: protein_coding
description:
  S-adenosylmethionine tRNA ribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_21555
symbol: trpD
gene_biotype: protein_coding
description:
  Glutamine amidotransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).


ensembl_gene_id: LFZ48_21560
symbol: trpF
gene_biotype: protein_coding
description:
  Indole-3-glycerol phosphate synthase; Monomeric bifunctional protein; functions in tryptophan biosynthesis pathway; phosphoribosylanthranilate is rearranged to carboxyphenylaminodeoxyribulosephosphate which is then closed to form indole-3-glycerol phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TrpC family.


ensembl_gene_id: LFZ48_21565
symbol: trpB
gene_biotype: protein_coding
description:
  Tryptophan synthase subunit beta; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.


ensembl_gene_id: LFZ48_21570
symbol: trpA
gene_biotype: protein_coding
description:
  Tryptophan synthase subunit alpha; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.


ensembl_gene_id: LFZ48_21590
symbol: KSB56909.1
gene_biotype: protein_coding
description:
  Mn-containing catalase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_21595
symbol: ompW
gene_biotype: protein_coding
description:
  Hypothetical protein; Receptor for colicin S4; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_21610
symbol: ispZ
gene_biotype: protein_coding
description:
  Intracellular septation protein A; Involved in cell division; probably involved in intracellular septation; Belongs to the YciB family.


ensembl_gene_id: LFZ48_21620
symbol: KSB56944.1
gene_biotype: protein_coding
description:
  Energy transducer TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.


ensembl_gene_id: LFZ48_21625
symbol: yciI
gene_biotype: protein_coding
description:
  Hypothetical protein; Unknown function; YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase, but does not seem to catalyze any of the predicted reactions based on sequence and structure similarity; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_21630
symbol: cls
gene_biotype: protein_coding
description:
  Cardiolipin synthetase; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol.


ensembl_gene_id: LFZ48_21635
symbol: yciU
gene_biotype: protein_coding
description:
  Highly acidic protein; the structure of the Haemophilus influenzae protein shows similarity to uracil DNA glycosylase inhibitor (Ugi); binds heat-unstable protein (HU-alpha) which is a histone-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0263 family.


ensembl_gene_id: LFZ48_21650
symbol: oppD
gene_biotype: protein_coding
description:
  Oligopeptide transporter ATP-binding component; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.


ensembl_gene_id: LFZ48_21655
symbol: oppC
gene_biotype: protein_coding
description:
  Peptide ABC transporter permease; With OppABDF is involved in the transport of oligopeptides of up to 5 amino acids into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_21660
symbol: oppB
gene_biotype: protein_coding
description:
  Oligopeptide transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_21675
symbol: adh
gene_biotype: protein_coding
description:
  Acetaldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.


ensembl_gene_id: LFZ48_21680
symbol: tdk
gene_biotype: protein_coding
description:
  Thymidine kinase; Catalyzes the formation of thymidine 5'-phosphate from thymidine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_21685
symbol: KSB56926.1
gene_biotype: protein_coding
description:
  Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the histone-like protein H-NS family.


ensembl_gene_id: LFZ48_21690
symbol: galU
gene_biotype: protein_coding
description:
  Together with GalF subunit composes the UTP--glucose-1-phosphate uridylyltransferase, an enzyme that catalyzes the formation of UDP-glucose from UTP and alpha-D-glucose 1-phosphate; regulates cellular levels of UDP-glucose; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_21695
symbol: rssB
gene_biotype: protein_coding
description:
  Response regulator of RpoS; Regulates the turnover of the sigma S factor (RpoS) by promoting its proteolysis in exponentially growing cells. Acts by binding and delivering RpoS to the ClpXP protease. RssB is not co- degraded with RpoS, but is released from the complex and can initiate a new cycle of RpoS recognition and degradation.


ensembl_gene_id: LFZ48_21700
symbol: KSB56929.1
gene_biotype: protein_coding
description:
  Phospholipase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_21705
symbol: ychJ
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0225 family.


ensembl_gene_id: LFZ48_21710
symbol: purU
gene_biotype: protein_coding
description:
  Formyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4).


ensembl_gene_id: LFZ48_21750
symbol: KSB56937.1
gene_biotype: protein_coding
description:
  Nitrate/nitrite sensor protein NarX; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_21755
symbol: narL
gene_biotype: protein_coding
description:
  Two-component response regulator NarL; phosphorylated by NarQ; activates transcription of nitrate and nitrite reductase genes and represses transcription of fumarate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_21770
symbol: KSB56941.1
gene_biotype: protein_coding
description:
  Transporter; Catalyzes the cleavage of glutathione into 5-oxo-L-proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides; Belongs to the gamma-glutamylcyclotransferase family.


ensembl_gene_id: LFZ48_21775
symbol: chaB
gene_biotype: protein_coding
description:
  Cation transport regulator; In Escherichia coli this protein putatively regulates the sodium/proton (also pH-independent calcium/proton) antiporter chaA; has weak affinity for calcium and magnesium ions; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_21780
symbol: chaA
gene_biotype: protein_coding
description:
  Calcium:proton antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_21825
symbol: tyrP
gene_biotype: protein_coding
description:
  Tyrosine transporter TyrP; Tyrosine specific permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_21830
symbol: KSB56798.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0149 family.


ensembl_gene_id: LFZ48_21835
symbol: KSB56799.1
gene_biotype: protein_coding
description:
  Glucose-6-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_21840
symbol: KSB56800.1
gene_biotype: protein_coding
description:
  Cell wall hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_21865
symbol: pgsA
gene_biotype: protein_coding
description:
  Phosphatidylglycerophosphate synthetase; This protein catalyzes the committed step to the synthesis of the acidic phospholipids; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: LFZ48_21870
symbol: uvrC
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.


ensembl_gene_id: LFZ48_21875
symbol: sirA
gene_biotype: protein_coding
description:
  Response regulator; In Escherichia coli the protein UvrY is part of a two-component system along with BarA that is needed for efficient switching between glycolytic and gluconeogenic carbon sources possibly by regulating the Csr system; in Salmonella SirA and BarA regulate virulence gene expression also via the Csr system; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_21905
symbol: dcyD
gene_biotype: protein_coding
description:
  Cysteine desulfhydrase; Catalyzes the alpha,beta-elimination reaction of D-cysteine and of several D-cysteine derivatives. It could be a defense mechanism against D-cysteine; Belongs to the ACC deaminase/D-cysteine desulfhydrase family.


ensembl_gene_id: LFZ48_21910
symbol: KSB56811.1
gene_biotype: protein_coding
description:
  Cystine transporter subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: LFZ48_21915
symbol: KSB56812.1
gene_biotype: protein_coding
description:
  Flagella biosynthesis protein FliZ; Expression activator of the class 2 type of flagellar operons, essential to achieve maximal cell motility; activator of type 1 fimbrial gene expression; cell density-responsive regulator; FliZ in Salmonella typhimurium induces HilA, an activator of invasion genes necessary to achieve full virulence; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_21920
symbol: fliA
gene_biotype: protein_coding
description:
  Flagellar biosynthesis sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes; Belongs to the sigma-70 factor family. FliA subfamily.


ensembl_gene_id: LFZ48_21925
symbol: KSB56814.1
gene_biotype: protein_coding
description:
  lysine-N-methylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_21930
symbol: fliC
gene_biotype: protein_coding
description:
  Flagellin; Structural flagella protein; individual Salmonella serotypes usually alternate between the production of 2 antigenic forms of flagella, termed phase 1 and phase 2, each specified by separate structural genes; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_21935
symbol: fliD
gene_biotype: protein_coding
description:
  Flagellar protein FliD; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.


ensembl_gene_id: LFZ48_21940
symbol: fliS
gene_biotype: protein_coding
description:
  Flagellar protein FliS; Flagellin specific chaperone; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_21945
symbol: fliT
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FliT; Dual-function protein that regulates the transcription of class 2 flagellar operons and that also acts as an export chaperone for the filament-capping protein FliD. As a transcriptional regulator, acts as an anti-FlhDC factor; it directly binds FlhC, thus inhibiting the binding of the FlhC/FlhD complex to class 2 promoters, resulting in decreased expression of class 2 flagellar operons. As a chaperone, effects FliD transition to the membrane by preventing its premature polymerization, and by directing it to the export apparatus.


ensembl_gene_id: LFZ48_21950
symbol: KSB56819.1
gene_biotype: protein_coding
description:
  Cytoplasmic alpha-amylase; Converts 1,4-alpha-D-glucans to maltodextrin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_21965
symbol: SBOV20251
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sulfur carrier protein TusA family.


ensembl_gene_id: LFZ48_21975
symbol: fliE
gene_biotype: protein_coding
description:
  Flagellar hook-basal body protein FliE; Forms a junction between the M-ring and FlgB during flagella biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_21980
symbol: fliF
gene_biotype: protein_coding
description:
  Hypothetical protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family.


ensembl_gene_id: LFZ48_21985
symbol: fliG
gene_biotype: protein_coding
description:
  Flagellar motor switch protein G; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.


ensembl_gene_id: LFZ48_21990
symbol: fliH
gene_biotype: protein_coding
description:
  Flagellar assembly protein H; Binds to and inhibits the function of flagella specific ATPase FliI; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_21995
symbol: fliI
gene_biotype: protein_coding
description:
  ATP synthase; Involved in type III protein export during flagellum assembly; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_22000
symbol: fliJ
gene_biotype: protein_coding
description:
  Flagellar biosynthesis chaperone; Flagellar protein that affects chemotactic events. Belongs to the FliJ family.


ensembl_gene_id: LFZ48_22005
symbol: KSB56830.1
gene_biotype: protein_coding
description:
  Flagellar hook-length control protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_22010
symbol: fliL
gene_biotype: protein_coding
description:
  Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.


ensembl_gene_id: LFZ48_22015
symbol: fliM
gene_biotype: protein_coding
description:
  Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.


ensembl_gene_id: LFZ48_22020
symbol: fliN
gene_biotype: protein_coding
description:
  Flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.


ensembl_gene_id: LFZ48_22025
symbol: fliO
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FliO; With FlhA, FlhB, FliP, FliQ and FliR is one of the membrane components of the flagellar export apparatus; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_22030
symbol: fliP
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein flip; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.


ensembl_gene_id: LFZ48_22035
symbol: fliQ
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.


ensembl_gene_id: LFZ48_22040
symbol: fliR
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family.


ensembl_gene_id: LFZ48_22045
symbol: rcsA
gene_biotype: protein_coding
description:
  Capsule biosynthesis protein CapA; Component of the Rcs signaling system, which controls transcription of numerous genes. Binds, with RcsB, to the RcsAB box to regulate expression of genes.


ensembl_gene_id: LFZ48_22050
symbol: dsrB
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DsrB family.


ensembl_gene_id: LFZ48_22060
symbol: KSB56840.1
gene_biotype: protein_coding
description:
  Mannosyl-3-phosphoglycerate phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_22065
symbol: yedQ
gene_biotype: protein_coding
description:
  Diguanylate cyclase; Catalyzes the formation of cyclic di-3',5'-guanylate from guanosine triphosphate; involved in the regulation of cellulose biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_22090
symbol: KSB56846.1
gene_biotype: protein_coding
description:
  DNA cytosine methylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_22105
symbol: ompS1
gene_biotype: protein_coding
description:
  Porin; Allows for ions and hydrophilic solutes to cross the outer membrane; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Gram-negative porin family.


ensembl_gene_id: LFZ48_22120
symbol: umuC
gene_biotype: protein_coding
description:
  DNA polymerase V subunit UmuC; Binds processed UmuD protein to form functional DNA pol V (UmuD'2UmuC); involved in translesion polymerization; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DNA polymerase type-Y family.


ensembl_gene_id: LFZ48_22125
symbol: umuD
gene_biotype: protein_coding
description:
  Binds with UmuC protein to form functional DNA pol V (UmuD'2UmuC); involved in translesion polymerization; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S24 family.


ensembl_gene_id: LFZ48_22140
symbol: KSB56115.1
gene_biotype: protein_coding
description:
  Cytochrome C peroxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_22145
symbol: torD
gene_biotype: protein_coding
description:
  Chaperone protein TorD; Involved in the biogenesis of TorA. Acts on TorA before the insertion of the molybdenum cofactor and, as a result, probably favors a conformation of the apoenzyme that is competent for acquiring the cofactor; Belongs to the TorD/DmsD family. TorD subfamily.


ensembl_gene_id: LFZ48_22160
symbol: KSB56167.1
gene_biotype: protein_coding
description:
  Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_22165
symbol: KSB56119.1
gene_biotype: protein_coding
description:
  TMAO reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_22170
symbol: KSB56120.1
gene_biotype: protein_coding
description:
  Histidine kinase; Member of the two-component regulatory system torS/torR involved in the anaerobic utilization of trimethylamine-N-oxide; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_22175
symbol: KSB56121.1
gene_biotype: protein_coding
description:
  Sugar phosphatase; YidA; catalyzes the dephosphorylation of erythrose 4-phosphate (preferred substrate), mannose 1-phosphate and p-nitrophenyl phosphate; hydrolyzes the alpha-D-glucose-1-phosphate but not the beta form; member of the haloacid dehalogenase-like hydrolases superfamily and Cof family of proteins; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: LFZ48_22180
symbol: gyrB
gene_biotype: protein_coding
description:
  DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


