# geneInfo

ensembl_gene_id: BSONL12_00025
symbol: menA
gene_biotype: protein_coding
description:
  1,4-dihydroxy-2-naphthoate octaprenyltransferase; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily.


ensembl_gene_id: BSONL12_00030
symbol: menF
gene_biotype: protein_coding
description:
  Menaquinone-specific isochorismate synthase; Catalyzes the conversion of chorismate to isochorismate.


ensembl_gene_id: BSONL12_00035
symbol: menD
gene_biotype: protein_coding
description:
  2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Belongs to the TPP enzyme family. MenD subfamily.


ensembl_gene_id: BSONL12_00040
symbol: menH
gene_biotype: protein_coding
description:
  Esterase YtxM; Catalyzes a proton abstraction reaction that results in 2,5- elimination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC) and the formation of 2-succinyl-6- hydroxy-2,4-cyclohexadiene-1-carboxylate (SHCHC).


ensembl_gene_id: BSONL12_00045
symbol: menB
gene_biotype: protein_coding
description:
  Dihydroxynaphthoic acid synthetase; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA).


ensembl_gene_id: BSONL12_00050
symbol: menE
gene_biotype: protein_coding
description:
  O-succinylbenzoic acid--CoA ligase; Converts 2-succinylbenzoate (OSB) to 2-succinylbenzoyl-CoA (OSB-CoA); Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily.


ensembl_gene_id: BSONL12_00055
symbol: menC
gene_biotype: protein_coding
description:
  O-succinylbenzoate synthase MenC; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB).


ensembl_gene_id: BSONL12_00060
symbol: SsuD
gene_biotype: protein_coding
description:
  Monooxygenase YxeK; COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases.


ensembl_gene_id: BSONL12_00070
symbol: EME76638.1
gene_biotype: protein_coding
description:
  COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: BSONL12_00080
symbol: EME76640.1
gene_biotype: protein_coding
description:
  ABC transporter ATP-binding protein; COG1126 ABC-type polar amino acid transport system, ATPase component.


ensembl_gene_id: BSONL12_00120
symbol: EME76648.1
gene_biotype: protein_coding
description:
  Metal ABC transporter substrate-binding protein; COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin; Belongs to the bacterial solute-binding protein 9 family.


ensembl_gene_id: BSONL12_00130
symbol: EME76650.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.


ensembl_gene_id: BSONL12_00135
symbol: luxS
gene_biotype: protein_coding
description:
  S-ribosylhomocysteinase; Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5-dihydroxy-2,3-pentadione (DPD). Belongs to the LuxS family.


ensembl_gene_id: BSONL12_00150
symbol: EME76654.1
gene_biotype: protein_coding
description:
  Iron storage protein Dps; COG0783 DNA-binding ferritin-like protein (oxidative damage protectant); Belongs to the Dps family.


ensembl_gene_id: BSONL12_00170
symbol: EME76658.1
gene_biotype: protein_coding
description:
  Nucleoside triphosphatase YtkD; COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; Belongs to the Nudix hydrolase family.


ensembl_gene_id: BSONL12_00175
symbol: EME76659.1
gene_biotype: protein_coding
description:
  ABC transporter permease YtlD; COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.


ensembl_gene_id: BSONL12_00180
symbol: EME76660.1
gene_biotype: protein_coding
description:
  ABC transporter ATP-binding protein YtlC; COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component.


ensembl_gene_id: BSONL12_00185
symbol: EME76661.1
gene_biotype: protein_coding
description:
  ABC transporter substrate-binding protein YtlA; COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components.


ensembl_gene_id: BSONL12_00200
symbol: EME76664.1
gene_biotype: protein_coding
description:
  COG1301 Na+/H+-dicarboxylate symporters; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: BSONL12_00205
symbol: pckA
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate carboxykinase; Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA.


ensembl_gene_id: BSONL12_00210
symbol: metK
gene_biotype: protein_coding
description:
  S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.


ensembl_gene_id: BSONL12_00230
symbol: EME76670.1
gene_biotype: protein_coding
description:
  Sugar transferase YtoA; COG0663 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily.


ensembl_gene_id: BSONL12_00245
symbol: EME76673.1
gene_biotype: protein_coding
description:
  Proton/glutamate symport protein; COG1301 Na+/H+-dicarboxylate symporters; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: BSONL12_00270
symbol: EME76678.1
gene_biotype: protein_coding
description:
  Acetoin ABC transporter ATP-binding protein YtrB; COG1131 ABC-type multidrug transport system, ATPase component.


ensembl_gene_id: BSONL12_00280
symbol: EME76680.1
gene_biotype: protein_coding
description:
  Acetoin ABC transporter ATP-binding protein YtrE; COG1136 ABC-type antimicrobial peptide transport system, ATPase component.


ensembl_gene_id: BSONL12_00285
symbol: EME76681.1
gene_biotype: protein_coding
description:
  Acetoin ABC transporter substrate-binding lipoprotein YtrF; COG0577 ABC-type antimicrobial peptide transport system, permease component.


ensembl_gene_id: BSONL12_00290
symbol: ctaB
gene_biotype: protein_coding
description:
  Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group; Belongs to the UbiA prenyltransferase family. Protoheme IX farnesyltransferase subfamily.


ensembl_gene_id: BSONL12_00300
symbol: EME76684.1
gene_biotype: protein_coding
description:
  Lipoprotein; COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen; Belongs to the nlpA lipoprotein family.


ensembl_gene_id: BSONL12_00350
symbol: EME76694.1
gene_biotype: protein_coding
description:
  ABC transporter substrate-binding protein YtcQ; COG1653 ABC-type sugar transport system, periplasmic component.


ensembl_gene_id: BSONL12_00365
symbol: YteR
gene_biotype: protein_coding
description:
  Galacturonyl hydrolase YteR; COG4225 Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins.


ensembl_gene_id: BSONL12_00410
symbol: SdhB
gene_biotype: protein_coding
description:
  COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.


ensembl_gene_id: BSONL12_00435
symbol: pdxA
gene_biotype: protein_coding
description:
  4-hydroxythreonine-4-phosphate dehydrogenase; COG1995 Pyridoxal phosphate biosynthesis protein; Belongs to the PdxA family.


ensembl_gene_id: BSONL12_00460
symbol: EME76716.1
gene_biotype: protein_coding
description:
  Polysaccharide biosynthesis protein YtgP; COG2244 Membrane protein involved in the export of O-antigen and teichoic acid.


ensembl_gene_id: BSONL12_00465
symbol: RsuA
gene_biotype: protein_coding
description:
  Pseudouridine synthase YtzG; COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases; Belongs to the pseudouridine synthase RsuA family.


ensembl_gene_id: BSONL12_00480
symbol: DapE
gene_biotype: protein_coding
description:
  Dipeptidase PepV; COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases.


ensembl_gene_id: BSONL12_00490
symbol: LigT
gene_biotype: protein_coding
description:
  2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family.


ensembl_gene_id: BSONL12_00500
symbol: CerK
gene_biotype: protein_coding
description:
  Diacylglycerol/lipid kinase YtlR; COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase.


ensembl_gene_id: BSONL12_00515
symbol: trmB
gene_biotype: protein_coding
description:
  tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.


ensembl_gene_id: BSONL12_00560
symbol: EME76736.1
gene_biotype: protein_coding
description:
  tRNA-binding protein YtpR; COG0073 EMAP domain; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.


ensembl_gene_id: BSONL12_00692
symbol: EME76257.1
gene_biotype: protein_coding
description:
  Membrane protein YocA; COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains).


ensembl_gene_id: BSONL12_00727
symbol: EME76264.1
gene_biotype: protein_coding
description:
  Transporter; COG4146 Predicted symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.


ensembl_gene_id: BSONL12_00792
symbol: EME76277.1
gene_biotype: protein_coding
description:
  Short-chain dehydrogenase/reductase SDR; COG4221 Short-chain alcohol dehydrogenase of unknown specificity; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: BSONL12_00892
symbol: EME76297.1
gene_biotype: protein_coding
description:
  Putative oxidoreductase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: BSONL12_00917
symbol: rpsZ
gene_biotype: protein_coding
description:
  30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.


ensembl_gene_id: BSONL12_00957
symbol: queC
gene_biotype: protein_coding
description:
  exsB protein; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)).


ensembl_gene_id: BSONL12_00962
symbol: queE
gene_biotype: protein_coding
description:
  Radical SAM protein; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds.


ensembl_gene_id: BSONL12_00967
symbol: EME76312.1
gene_biotype: protein_coding
description:
  Multidrug efflux associated membrane protein; COG3694 ABC-type uncharacterized transport system, permease component.


ensembl_gene_id: BSONL12_00972
symbol: EME76313.1
gene_biotype: protein_coding
description:
  Abc transporter integral membrane protein; COG4587 ABC-type uncharacterized transport system, permease component.


ensembl_gene_id: BSONL12_00997
symbol: EME76318.1
gene_biotype: protein_coding
description:
  Radical SAM domain-containing protein; COG1549 Queuine tRNA-ribosyltransferases, contain PUA domain.


ensembl_gene_id: BSONL12_01017
symbol: azoR
gene_biotype: protein_coding
description:
  Azoreductase; Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family.


ensembl_gene_id: BSONL12_01027
symbol: OxdD
gene_biotype: protein_coding
description:
  Bicupin, oxalate decarboxylase family protein; COG2140 Thermophilic glucose-6-phosphate isomerase and related metalloenzymes.


ensembl_gene_id: BSONL12_01052
symbol: EME76329.1
gene_biotype: protein_coding
description:
  Aminoglycoside N6'-acetyltransferase; COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins.


ensembl_gene_id: BSONL12_01062
symbol: EME76331.1
gene_biotype: protein_coding
description:
  Pyridoxine 4-dehydrogenase; COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases).


ensembl_gene_id: BSONL12_01077
symbol: EME76334.1
gene_biotype: protein_coding
description:
  Sodium-dependent transporter protein YocR; COG0733 Na+-dependent transporters of the SNF family; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.


ensembl_gene_id: BSONL12_01092
symbol: EME76335.1
gene_biotype: protein_coding
description:
  Dihydrolipoamide succinyltransferase; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2).


ensembl_gene_id: BSONL12_01097
symbol: sucA
gene_biotype: protein_coding
description:
  2-oxoglutarate dehydrogenase E1 component; E1 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the decarboxylation of 2-oxoglutarate, the first step in the conversion of 2-oxoglutarate to succinyl-CoA and CO(2).


ensembl_gene_id: BSONL12_01167
symbol: EntA
gene_biotype: protein_coding
description:
  Oxidoreductase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).


ensembl_gene_id: BSONL12_01197
symbol: EME76356.1
gene_biotype: protein_coding
description:
  Na+/solute symporter YodF; COG0591 Na+/proline symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.


ensembl_gene_id: BSONL12_01202
symbol: EME76357.1
gene_biotype: protein_coding
description:
  Carboxy-terminal processing protease CtpA; COG0793 Periplasmic protease; Belongs to the peptidase S41A family.


ensembl_gene_id: BSONL12_01282
symbol: KamA
gene_biotype: protein_coding
description:
  Beta-lysine N-acetyltransferase YodP; COG0454 Histone acetyltransferase HPA2 and related acetyltransferases.


ensembl_gene_id: BSONL12_01302
symbol: PuuE
gene_biotype: protein_coding
description:
  Hypothetical protein; COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: BSONL12_01317
symbol: EME76380.1
gene_biotype: protein_coding
description:
  Spore outer layer maturation N-acetyltransferase CgeE; COG0454 Histone acetyltransferase HPA2 and related acetyltransferases.


ensembl_gene_id: BSONL12_01322
symbol: msrA
gene_biotype: protein_coding
description:
  methionine-R-sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.


ensembl_gene_id: BSONL12_01367
symbol: EME76388.1
gene_biotype: protein_coding
description:
  COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems.


ensembl_gene_id: BSONL12_01382
symbol: ilvA
gene_biotype: protein_coding
description:
  Threonine dehydratase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA.


ensembl_gene_id: BSONL12_01402
symbol: FolA
gene_biotype: protein_coding
description:
  Dihydrofolate reductase DfrA; Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis.


ensembl_gene_id: BSONL12_01447
symbol: fhs
gene_biotype: protein_coding
description:
  Formate--tetrahydrofolate ligase; COG2759 Formyltetrahydrofolate synthetase; Belongs to the formate--tetrahydrofolate ligase family.


ensembl_gene_id: BSONL12_01452
symbol: metAA
gene_biotype: protein_coding
description:
  Homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family.


ensembl_gene_id: BSONL12_01457
symbol: ugtP
gene_biotype: protein_coding
description:
  Diacylglycerol glucosyltransferase; Processive glucosyltransferase involved in the biosynthesis of both the bilayer- and non-bilayer-forming membrane glucolipids. Is able to successively transfer up to three glucosyl residues to diacylglycerol (DAG), thereby catalyzing the formation of beta- monoglucosyl-DAG (3-O-(beta-D-glucopyranosyl)-1,2-diacyl-sn-glycerol), beta-diglucosyl-DAG (3-O-(beta-D-glucopyranosyl-beta-(1->6)-D- glucopyranosyl)-1,2-diacyl-sn-glycerol) and beta-triglucosyl-DAG (3-O- (beta-D-glucopyranosyl-beta-(1->6)-D-glucopyranosyl-beta-(1->6)-D- glucopyranosyl)-1,2-diacyl- [...]


ensembl_gene_id: BSONL12_01492
symbol: EME76413.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage; Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily.


ensembl_gene_id: BSONL12_01532
symbol: EME76421.1
gene_biotype: protein_coding
description:
  Isoprenylcysteine carboxyl methyltransferase YpbQ; COG1755 Uncharacterized protein conserved in bacteria.


ensembl_gene_id: BSONL12_01552
symbol: xpt
gene_biotype: protein_coding
description:
  Xanthine phosphoribosyltransferase; Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis.


ensembl_gene_id: BSONL12_01557
symbol: EME76426.1
gene_biotype: protein_coding
description:
  Metalloprotease YpwA; Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues.


ensembl_gene_id: BSONL12_01577
symbol: YpsC
gene_biotype: protein_coding
description:
  RNA methyltransferase YpsC; COG0116 Predicted N6-adenine-specific DNA methylase; Belongs to the methyltransferase superfamily.


ensembl_gene_id: BSONL12_01582
symbol: gpsB
gene_biotype: protein_coding
description:
  Cell division protein GpsB; Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation.


ensembl_gene_id: BSONL12_01607
symbol: EME76436.1
gene_biotype: protein_coding
description:
  ATP-dependent helicase YprA; COG1205 Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster.


ensembl_gene_id: BSONL12_01617
symbol: EME76438.1
gene_biotype: protein_coding
description:
  Protein YpqA; COG0071 Molecular chaperone (small heat shock protein); Belongs to the small heat shock protein (HSP20) family.


ensembl_gene_id: BSONL12_01652
symbol: recU
gene_biotype: protein_coding
description:
  Holliday junction-specific endonuclease; Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation; Belongs to the RecU family.


ensembl_gene_id: BSONL12_01667
symbol: nth
gene_biotype: protein_coding
description:
  Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.


ensembl_gene_id: BSONL12_01702
symbol: panD
gene_biotype: protein_coding
description:
  Aspartate alpha-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.


ensembl_gene_id: BSONL12_01707
symbol: panC
gene_biotype: protein_coding
description:
  Pantoate--beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.


ensembl_gene_id: BSONL12_01712
symbol: panB
gene_biotype: protein_coding
description:
  3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family.


ensembl_gene_id: BSONL12_01717
symbol: birA
gene_biotype: protein_coding
description:
  Trigger enzyme biotin-protein ligase BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.


ensembl_gene_id: BSONL12_01722
symbol: cca
gene_biotype: protein_coding
description:
  tRNA CCA-pyrophosphorylase; Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate.


ensembl_gene_id: BSONL12_01742
symbol: dapB
gene_biotype: protein_coding
description:
  Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.


ensembl_gene_id: BSONL12_01767
symbol: EME76468.1
gene_biotype: protein_coding
description:
  Menaquinol-cytochrome c reductase cytochrome subunit beta/gamma QcrC; Component of the menaquinol-cytochrome c reductase complex.


ensembl_gene_id: BSONL12_01797
symbol: aroA
gene_biotype: protein_coding
description:
  3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.


ensembl_gene_id: BSONL12_01807
symbol: hisC
gene_biotype: protein_coding
description:
  COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.


ensembl_gene_id: BSONL12_01812
symbol: trpA
gene_biotype: protein_coding
description:
  Tryptophan synthase subunit alpha; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.


ensembl_gene_id: BSONL12_01817
symbol: trpB
gene_biotype: protein_coding
description:
  Tryptophan synthase subunit beta; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.


ensembl_gene_id: BSONL12_01832
symbol: trpD
gene_biotype: protein_coding
description:
  Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).


ensembl_gene_id: BSONL12_01837
symbol: trpE
gene_biotype: protein_coding
description:
  Anthranilate synthase component I; Part of a heterotetrameric complex that catalyzes the two- step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine-binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentr [...]


ensembl_gene_id: BSONL12_01842
symbol: AroH
gene_biotype: protein_coding
description:
  Chorismate mutase; Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis.


ensembl_gene_id: BSONL12_01847
symbol: aroB
gene_biotype: protein_coding
description:
  3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).


ensembl_gene_id: BSONL12_01852
symbol: aroC
gene_biotype: protein_coding
description:
  Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.


ensembl_gene_id: BSONL12_01862
symbol: ndk
gene_biotype: protein_coding
description:
  Mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-phosphodiesterase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.


ensembl_gene_id: BSONL12_01867
symbol: EME76488.1
gene_biotype: protein_coding
description:
  Heptaprenyl diphosphate synthase component II; COG0142 Geranylgeranyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family.


ensembl_gene_id: BSONL12_01872
symbol: ubiE
gene_biotype: protein_coding
description:
  Ubiquinone/menaquinone biosynthesis methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2).


ensembl_gene_id: BSONL12_01882
symbol: mtrB
gene_biotype: protein_coding
description:
  Transcription attenuation protein MtrB; Required for transcription attenuation control in the Trp operon. This trans-acting factor seems to recognize a 10 bases nucleotide sequence in the Trp leader transcript causing transcription termination. Binds the leader RNA only in presence of L-tryptophan. Belongs to the MtrB family.


ensembl_gene_id: BSONL12_01892
symbol: EME76493.1
gene_biotype: protein_coding
description:
  DNA-binding protein HU1; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.


ensembl_gene_id: BSONL12_01897
symbol: EME76494.1
gene_biotype: protein_coding
description:
  Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.


ensembl_gene_id: BSONL12_01912
symbol: gpsA
gene_biotype: protein_coding
description:
  COG0240 Glycerol-3-phosphate dehydrogenase; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: BSONL12_01917
symbol: der
gene_biotype: protein_coding
description:
  GTP-binding protein Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.


ensembl_gene_id: BSONL12_01942
symbol: fni
gene_biotype: protein_coding
description:
  Isopentenyl pyrophosphate isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).


ensembl_gene_id: BSONL12_01972
symbol: EME76509.1
gene_biotype: protein_coding
description:
  Protease PrsW; Involved in the degradation of specific anti-sigma factors. Belongs to the protease PrsW family.


ensembl_gene_id: BSONL12_01987
symbol: GudB
gene_biotype: protein_coding
description:
  Trigger enzyme glutamate dehydrogenase GudB; COG0334 Glutamate dehydrogenase/leucine dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.


ensembl_gene_id: BSONL12_01992
symbol: mecA
gene_biotype: protein_coding
description:
  Adaptor protein; Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis. Acts negatively in the development of competence by binding ComK and recruiting it to the ClpCP protease. When overexpressed, inhibits sporulation. Also involved in Spx degradation by ClpC.


ensembl_gene_id: BSONL12_02032
symbol: EME76521.1
gene_biotype: protein_coding
description:
  Riboflavin transporter RibU; Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins; Belongs to the prokaryotic riboflavin transporter (P-RFT) (TC 2.A.87) family.


ensembl_gene_id: BSONL12_02037
symbol: EME76522.1
gene_biotype: protein_coding
description:
  COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: BSONL12_02052
symbol: EME76525.1
gene_biotype: protein_coding
description:
  COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: BSONL12_02077
symbol: EME76530.1
gene_biotype: protein_coding
description:
  COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.


ensembl_gene_id: BSONL12_02107
symbol: resA
gene_biotype: protein_coding
description:
  Thiol-disulfide oxidoreductase; Thiol-disulfide oxidoreductase which is required in disulfide reduction during c-type cytochrome synthesis. May accept reducing equivalents from CcdA, leading to breakage of disulfide bonds in apocytochrome c; following this reduction heme can be covalently attached.


ensembl_gene_id: BSONL12_02112
symbol: RluB
gene_biotype: protein_coding
description:
  Ribosomal large subunit pseudouridine synthase RluB; COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases; Belongs to the pseudouridine synthase RsuA family.


ensembl_gene_id: BSONL12_02137
symbol: scpB
gene_biotype: protein_coding
description:
  Segregation/condensation protein ScpB; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: BSONL12_02142
symbol: scpA
gene_biotype: protein_coding
description:
  Segregation and condensation protein A; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: BSONL12_02157
symbol: ribH
gene_biotype: protein_coding
description:
  6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin; Belongs to the DMRL synthase family.


ensembl_gene_id: BSONL12_02162
symbol: ribBA
gene_biotype: protein_coding
description:
  Bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.


ensembl_gene_id: BSONL12_02172
symbol: RibD
gene_biotype: protein_coding
description:
  Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.


ensembl_gene_id: BSONL12_02182
symbol: EME76551.1
gene_biotype: protein_coding
description:
  Heat-shock protein; COG0071 Molecular chaperone (small heat shock protein); Belongs to the small heat shock protein (HSP20) family.


ensembl_gene_id: BSONL12_02197
symbol: PpiB
gene_biotype: protein_coding
description:
  Peptidyl-prolyl cis-trans isomerase B; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.


ensembl_gene_id: BSONL12_02212
symbol: lysA
gene_biotype: protein_coding
description:
  Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.


ensembl_gene_id: BSONL12_02262
symbol: EME76567.1
gene_biotype: protein_coding
description:
  Sporulation sigma factor SigF; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: BSONL12_02267
symbol: spoIIAB
gene_biotype: protein_coding
description:
  Anti-sigma F factor; Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition.


ensembl_gene_id: BSONL12_02272
symbol: EME76569.1
gene_biotype: protein_coding
description:
  COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); Belongs to the anti-sigma-factor antagonist family.


ensembl_gene_id: BSONL12_02282
symbol: PunA
gene_biotype: protein_coding
description:
  Purine nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.


ensembl_gene_id: BSONL12_02287
symbol: deoB
gene_biotype: protein_coding
description:
  Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family.


ensembl_gene_id: BSONL12_02292
symbol: xerD
gene_biotype: protein_coding
description:
  Site-specific tyrosine recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.


ensembl_gene_id: BSONL12_02302
symbol: EME76575.1
gene_biotype: protein_coding
description:
  Fur family transcriptional regulator Fur; COG0735 Fe2+/Zn2+ uptake regulation proteins; Belongs to the Fur family.


ensembl_gene_id: BSONL12_02307
symbol: EME76576.1
gene_biotype: protein_coding
description:
  Stage II sporulation protein M; Required for complete septum migration and engulfment of the forespore compartment during sporulation. Required for stabilizing and recruiting of SpoIIP to the septal membrane.


ensembl_gene_id: BSONL12_02312
symbol: EME76577.1
gene_biotype: protein_coding
description:
  PTS system cellobiose-specific transporter subunit IIC; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.


ensembl_gene_id: BSONL12_02347
symbol: EME76584.1
gene_biotype: protein_coding
description:
  ADP-ribose pyrophosphatase NudF; COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; Belongs to the Nudix hydrolase family.


ensembl_gene_id: BSONL12_02367
symbol: EME76588.1
gene_biotype: protein_coding
description:
  Aldo/keto reductase YqkF; COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases).


ensembl_gene_id: BSONL12_02402
symbol: EME76595.1
gene_biotype: protein_coding
description:
  Hypothetical protein; COG2329 Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides.


ensembl_gene_id: BSONL12_02427
symbol: EME76600.1
gene_biotype: protein_coding
description:
  Oligopeptide ABC transporter substrate-binding protein; COG0747 ABC-type dipeptide transport system, periplasmic component.


ensembl_gene_id: BSONL12_02442
symbol: EME76603.1
gene_biotype: protein_coding
description:
  Oligopeptide ABC transporter ATP-binding protein; COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component.


ensembl_gene_id: BSONL12_02447
symbol: EME76604.1
gene_biotype: protein_coding
description:
  Oligopeptide ABC transporter ATP-binding protein; COG4608 ABC-type oligopeptide transport system, ATPase component.


ensembl_gene_id: BSONL12_02472
symbol: EME76609.1
gene_biotype: protein_coding
description:
  UV-damage repair protein UvrX; COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair; Belongs to the DNA polymerase type-Y family.


ensembl_gene_id: BSONL12_02512
symbol: EME76617.1
gene_biotype: protein_coding
description:
  ABC transporter protein ATP-binding protein; COG1131 ABC-type multidrug transport system, ATPase component.


ensembl_gene_id: BSONL12_02537
symbol: EME76620.1
gene_biotype: protein_coding
description:
  Bacitracin ABC transporter permease; COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component.


ensembl_gene_id: BSONL12_02542
symbol: EME76621.1
gene_biotype: protein_coding
description:
  Bacitracin ABC transporter ATP-binding protein; COG1131 ABC-type multidrug transport system, ATPase component.


ensembl_gene_id: BSONL12_02552
symbol: EME76623.1
gene_biotype: protein_coding
description:
  Two component transcriptional regulator; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.


ensembl_gene_id: BSONL12_02579
symbol: aroD
gene_biotype: protein_coding
description:
  3-dehydroquinate dehydratase; Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis- dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3-dehydroshikimate. Belongs to the type-I 3-dehydroquinase family.


ensembl_gene_id: BSONL12_02589
symbol: thiC
gene_biotype: protein_coding
description:
  Phosphomethylpyrimidine synthase ThiC; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. Belongs to the ThiC family.


ensembl_gene_id: BSONL12_02594
symbol: ssuB
gene_biotype: protein_coding
description:
  Aliphatic sulfonate ABC transporter ATP-binding protein SsuB; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.


ensembl_gene_id: BSONL12_02599
symbol: EME75831.1
gene_biotype: protein_coding
description:
  Aliphatic sulfonate ABC transporter substrate-binding protein SsuA; COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components.


ensembl_gene_id: BSONL12_02609
symbol: ssuD
gene_biotype: protein_coding
description:
  Alkanesulfonate monooxygenase; Catalyzes the desulfonation of aliphatic sulfonates. Belongs to the SsuD family.


ensembl_gene_id: BSONL12_02614
symbol: rpsN
gene_biotype: protein_coding
description:
  30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.


ensembl_gene_id: BSONL12_02624
symbol: queG
gene_biotype: protein_coding
description:
  Iron-sulfur cluster-binding protein YhbA; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr); Belongs to the QueG family.


ensembl_gene_id: BSONL12_02634
symbol: TrmL
gene_biotype: protein_coding
description:
  tRNA(cytidine/uridine-2'-O-)-methyltransferase CspR; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.


ensembl_gene_id: BSONL12_02704
symbol: EME75852.1
gene_biotype: protein_coding
description:
  ABC transporter ATP-binding protein YhcH; COG1131 ABC-type multidrug transport system, ATPase component.


ensembl_gene_id: BSONL12_02709
symbol: EME75853.1
gene_biotype: protein_coding
description:
  ABC transporter permease YhcI; COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component.


ensembl_gene_id: BSONL12_02719
symbol: metN
gene_biotype: protein_coding
description:
  D-methionine ABC transporter ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.


ensembl_gene_id: BSONL12_02729
symbol: EME75857.1
gene_biotype: protein_coding
description:
  D-methionine ABC transporter substrate-binding protein; COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen; Belongs to the nlpA lipoprotein family.


ensembl_gene_id: BSONL12_02734
symbol: EME75858.1
gene_biotype: protein_coding
description:
  Sodium-cystine symporter TcyP; COG1823 Predicted Na+/dicarboxylate symporter; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: BSONL12_02789
symbol: EME75866.1
gene_biotype: protein_coding
description:
  Glycine betaine/carnitine/choline transport ATP-binding protein opuCA; COG1125 ABC-type proline/glycine betaine transport systems, ATPase components.


ensembl_gene_id: BSONL12_02799
symbol: EME75868.1
gene_biotype: protein_coding
description:
  COG1732 Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein).


ensembl_gene_id: BSONL12_02809
symbol: EME75870.1
gene_biotype: protein_coding
description:
  Pseudouridine synthase YhcT; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: BSONL12_02844
symbol: EME75877.1
gene_biotype: protein_coding
description:
  Aminotransferase; COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: BSONL12_02849
symbol: EME75878.1
gene_biotype: protein_coding
description:
  NAD(P)-binding alcohol dehydrogenase YogA; COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases.


ensembl_gene_id: BSONL12_02854
symbol: EME75879.1
gene_biotype: protein_coding
description:
  Glycerol uptake operon antiterminator regulatory protein; Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA.


ensembl_gene_id: BSONL12_02859
symbol: EME75880.1
gene_biotype: protein_coding
description:
  COG0580 Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family); Belongs to the MIP/aquaporin (TC 1.A.8) family.


ensembl_gene_id: BSONL12_02864
symbol: glpK
gene_biotype: protein_coding
description:
  Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.


ensembl_gene_id: BSONL12_02869
symbol: GlpA
gene_biotype: protein_coding
description:
  COG0578 Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: BSONL12_02889
symbol: EME75886.1
gene_biotype: protein_coding
description:
  Hypothetical protein; COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.


ensembl_gene_id: BSONL12_02949
symbol: EME75898.1
gene_biotype: protein_coding
description:
  Transcriptional repressor CitR; COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: BSONL12_02974
symbol: EME75903.1
gene_biotype: protein_coding
description:
  Sodium-dependent transporter YhdH; COG0733 Na+-dependent transporters of the SNF family; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.


ensembl_gene_id: BSONL12_02989
symbol: EME75906.1
gene_biotype: protein_coding
description:
  COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs.


ensembl_gene_id: BSONL12_02994
symbol: EME75907.1
gene_biotype: protein_coding
description:
  GCN5-like N-acetyltransferase; COG0454 Histone acetyltransferase HPA2 and related acetyltransferases.


ensembl_gene_id: BSONL12_03014
symbol: EME75911.1
gene_biotype: protein_coding
description:
  1-acylglycerol-3-phosphate O-acyltransferase; COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.


ensembl_gene_id: BSONL12_03059
symbol: crcB
gene_biotype: protein_coding
description:
  Camphor resistance protein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.


ensembl_gene_id: BSONL12_03064
symbol: crcB-2
gene_biotype: protein_coding
description:
  Membrane protein YhdV; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.


ensembl_gene_id: BSONL12_03084
symbol: cobB
gene_biotype: protein_coding
description:
  NAD-dependent deacetylase; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class U subfamily.


ensembl_gene_id: BSONL12_03099
symbol: EME75928.1
gene_biotype: protein_coding
description:
  D-alanine aminotransferase Dat; Acts on the D-isomers of alanine, leucine, aspartate, glutamate, aminobutyrate, norvaline and asparagine. The enzyme transfers an amino group from a substrate D-amino acid to the pyridoxal phosphate cofactor to form pyridoxamine and an alpha-keto acid in the first half-reaction.


ensembl_gene_id: BSONL12_03129
symbol: EME75934.1
gene_biotype: protein_coding
description:
  Stress response protein, NhaX; COG0589 Universal stress protein UspA and related nucleotide-binding proteins.


ensembl_gene_id: BSONL12_03134
symbol: EME75935.1
gene_biotype: protein_coding
description:
  ABC transporter ATP-binding protein/permease YheI; COG1132 ABC-type multidrug transport system, ATPase and permease components.


ensembl_gene_id: BSONL12_03139
symbol: EME75936.1
gene_biotype: protein_coding
description:
  ABC transporter ATP-binding protein/permease YheH; COG1132 ABC-type multidrug transport system, ATPase and permease components.


ensembl_gene_id: BSONL12_03159
symbol: EME75940.1
gene_biotype: protein_coding
description:
  Multiple sugar ABC transporter ATP-binding protein MsmX; COG3839 ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily.


ensembl_gene_id: BSONL12_03174
symbol: EME75943.1
gene_biotype: protein_coding
description:
  Hypothetical protein; COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase).


ensembl_gene_id: BSONL12_03179
symbol: EME75944.1
gene_biotype: protein_coding
description:
  Protein YheC; COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase).


ensembl_gene_id: BSONL12_03219
symbol: EME75952.1
gene_biotype: protein_coding
description:
  K+/H+ antiporter for K+ efflux; COG0490 Putative regulatory, ligand-binding protein related to C-terminal domains of K+ channels.


ensembl_gene_id: BSONL12_03244
symbol: UgpC
gene_biotype: protein_coding
description:
  ABC transporter ATP-binding protein YhaQ; COG4152 ABC-type uncharacterized transport system, ATPase component.


ensembl_gene_id: BSONL12_03274
symbol: prsA
gene_biotype: protein_coding
description:
  Foldase protein PrsA; Plays a major role in protein secretion by helping the post- translocational extracellular folding of several secreted proteins.


ensembl_gene_id: BSONL12_03314
symbol: serC
gene_biotype: protein_coding
description:
  3-phosphoserine/phosphohydroxythreonine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine.


ensembl_gene_id: BSONL12_03319
symbol: EME75972.1
gene_biotype: protein_coding
description:
  Histidine triad domain-containing protein Hit; COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases.


ensembl_gene_id: BSONL12_03329
symbol: EME75974.1
gene_biotype: protein_coding
description:
  ABC transporter permease EcsB; COG4473 Predicted ABC-type exoprotein transport system, permease component.


ensembl_gene_id: BSONL12_03359
symbol: hemE
gene_biotype: protein_coding
description:
  Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.


ensembl_gene_id: BSONL12_03364
symbol: hemH
gene_biotype: protein_coding
description:
  Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.


ensembl_gene_id: BSONL12_03369
symbol: PpoX
gene_biotype: protein_coding
description:
  Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.


ensembl_gene_id: BSONL12_03384
symbol: fabH
gene_biotype: protein_coding
description:
  3-oxoacyl-(acyl carrier protein) synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.


ensembl_gene_id: BSONL12_03394
symbol: EME75987.1
gene_biotype: protein_coding
description:
  Proton/sodium-glutamate symport protein GltT; COG1301 Na+/H+-dicarboxylate symporters; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: BSONL12_03429
symbol: EME75994.1
gene_biotype: protein_coding
description:
  Branched-chain aminoacid transporter AzlC; COG1296 Predicted branched-chain amino acid permease (azaleucine resistance).


ensembl_gene_id: BSONL12_03449
symbol: EME75998.1
gene_biotype: protein_coding
description:
  Iron/citrate ABC transporter substrate-binding protein YhfQ; COG4594 ABC-type Fe3+-citrate transport system, periplasmic component.


ensembl_gene_id: BSONL12_03454
symbol: EME75999.1
gene_biotype: protein_coding
description:
  Iron/citrate ABC transporter permease YfmD; COG0609 ABC-type Fe3+-siderophore transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: BSONL12_03459
symbol: EME76000.1
gene_biotype: protein_coding
description:
  Iron/citrate ABC transporter permease YfmE; COG0609 ABC-type Fe3+-siderophore transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: BSONL12_03464
symbol: EME76001.1
gene_biotype: protein_coding
description:
  Phosphatase YhfR; COG0406 Fructose-2,6-bisphosphatase; Belongs to the phosphoglycerate mutase family.


ensembl_gene_id: BSONL12_03484
symbol: EME76005.1
gene_biotype: protein_coding
description:
  Oxidoreductase YhxC; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).


ensembl_gene_id: BSONL12_03529
symbol: EME76012.1
gene_biotype: protein_coding
description:
  DNA endonuclease, type III restriction and modification system; COG3421 Uncharacterized protein conserved in bacteria.


ensembl_gene_id: BSONL12_03544
symbol: EME76015.1
gene_biotype: protein_coding
description:
  Purine catabolism transcriptional regulator PucR; COG2508 Regulator of polyketide synthase expression.


ensembl_gene_id: BSONL12_03554
symbol: allB
gene_biotype: protein_coding
description:
  Allantoinase; Catalyzes the conversion of allantoin (5-ureidohydantoin) to allantoic acid by hydrolytic cleavage of the five-member hydantoin ring; Belongs to the metallo-dependent hydrolases superfamily. Allantoinase family.


ensembl_gene_id: BSONL12_03564
symbol: AllC
gene_biotype: protein_coding
description:
  Allantoate amidohydrolase; COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases.


ensembl_gene_id: BSONL12_03659
symbol: EME76038.1
gene_biotype: protein_coding
description:
  Molybdenum uptake ABC transporter substrate-binding protein YvgL; COG0725 ABC-type molybdate transport system, periplasmic component.


ensembl_gene_id: BSONL12_03664
symbol: EME76039.1
gene_biotype: protein_coding
description:
  Molybdenum uptake ABC transporter permease YvgM; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: BSONL12_03669
symbol: addB
gene_biotype: protein_coding
description:
  ATP-dependent nuclease subunit B; ATP-dependent DNA helicase; Belongs to the helicase family. AddB/RexB type 1 subfamily.


ensembl_gene_id: BSONL12_03679
symbol: sbcD
gene_biotype: protein_coding
description:
  Exonuclease subunit delta SbcD; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family.


ensembl_gene_id: BSONL12_03739
symbol: EME76054.1
gene_biotype: protein_coding
description:
  Fumarylacetoacetase YisK; COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway).


ensembl_gene_id: BSONL12_03744
symbol: rsgA
gene_biotype: protein_coding
description:
  GTPase RsgA; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.


ensembl_gene_id: BSONL12_03799
symbol: EctB
gene_biotype: protein_coding
description:
  COG0160 4-aminobutyrate aminotransferase and related aminotransferases; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: BSONL12_03819
symbol: IucB
gene_biotype: protein_coding
description:
  Rhizobactin siderophore biosynthesis protein RhbD; COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins.


ensembl_gene_id: BSONL12_03834
symbol: MetH
gene_biotype: protein_coding
description:
  Methionine synthase MetH; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.


ensembl_gene_id: BSONL12_03839
symbol: MmuM
gene_biotype: protein_coding
description:
  Bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein; COG0646 Methionine synthase I (cobalamin-dependent), methyltransferase domain.


ensembl_gene_id: BSONL12_03879
symbol: guaC
gene_biotype: protein_coding
description:
  Guanosine 5'-monophosphate oxidoreductase; Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides; Belongs to the IMPDH/GMPR family. GuaC type 2 subfamily.


ensembl_gene_id: BSONL12_03914
symbol: argC
gene_biotype: protein_coding
description:
  N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.


ensembl_gene_id: BSONL12_03919
symbol: argJ
gene_biotype: protein_coding
description:
  Bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family.


ensembl_gene_id: BSONL12_03924
symbol: argB
gene_biotype: protein_coding
description:
  Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.


ensembl_gene_id: BSONL12_03929
symbol: argD
gene_biotype: protein_coding
description:
  COG4992 Ornithine/acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.


ensembl_gene_id: BSONL12_03944
symbol: EME76093.1
gene_biotype: protein_coding
description:
  Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.


ensembl_gene_id: BSONL12_03969
symbol: EME76098.1
gene_biotype: protein_coding
description:
  Transcriptional activator protein Med; COG1744 Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein.


ensembl_gene_id: BSONL12_03989
symbol: EME76102.1
gene_biotype: protein_coding
description:
  3-oxoacyl-(acyl carrier protein) synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.


ensembl_gene_id: BSONL12_03999
symbol: EME76104.1
gene_biotype: protein_coding
description:
  Oligopeptide ABC transporter ATP-binding protein; COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; Belongs to the ABC transporter superfamily.


ensembl_gene_id: BSONL12_04004
symbol: EME76105.1
gene_biotype: protein_coding
description:
  Oligopeptide ABC transporter ATP-binding protein; COG4608 ABC-type oligopeptide transport system, ATPase component; Belongs to the ABC transporter superfamily.


ensembl_gene_id: BSONL12_04029
symbol: trpS
gene_biotype: protein_coding
description:
  tryptophanyl-tRNA ligase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: BSONL12_04034
symbol: EME76111.1
gene_biotype: protein_coding
description:
  Oligopeptide ABC transporter substrate-binding protein OppA; COG4166 ABC-type oligopeptide transport system, periplasmic component.


ensembl_gene_id: BSONL12_04049
symbol: EME76114.1
gene_biotype: protein_coding
description:
  Oligopeptide ABC transporter ATP-binding protein OppD; COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; Belongs to the ABC transporter superfamily.


ensembl_gene_id: BSONL12_04054
symbol: EME76115.1
gene_biotype: protein_coding
description:
  Oligopeptide ABC transporter ATP-binding protein OppF; COG4608 ABC-type oligopeptide transport system, ATPase component; Belongs to the ABC transporter superfamily.


ensembl_gene_id: BSONL12_04064
symbol: spxA
gene_biotype: protein_coding
description:
  Transcriptional regulator Spx; Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development- promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress. Belongs to the ArsC family. Spx subfamily.


ensembl_gene_id: BSONL12_04094
symbol: EME76123.1
gene_biotype: protein_coding
description:
  Adaptor protein YjbH; COG2761 Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis.


ensembl_gene_id: BSONL12_04104
symbol: EME76125.1
gene_biotype: protein_coding
description:
  COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains).


ensembl_gene_id: BSONL12_04124
symbol: ppnK
gene_biotype: protein_coding
description:
  Inorganic polyphosphate/ATP-NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.


ensembl_gene_id: BSONL12_04129
symbol: EME76130.1
gene_biotype: protein_coding
description:
  Pseudouridine synthase YjbO; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: BSONL12_04134
symbol: ApaH
gene_biotype: protein_coding
description:
  Bis(5'-nucleosyl)-tetraphosphatase PrpE; COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases.


ensembl_gene_id: BSONL12_04139
symbol: EME76132.1
gene_biotype: protein_coding
description:
  Na(+)/H(+) antiporter YjbQ; COG0475 Kef-type K+ transport systems, membrane components; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.


ensembl_gene_id: BSONL12_04144
symbol: TenA
gene_biotype: protein_coding
description:
  Thiaminase TenA; Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway; Belongs to the TenA family.


ensembl_gene_id: BSONL12_04164
symbol: thiG
gene_biotype: protein_coding
description:
  Thiazole synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.


ensembl_gene_id: BSONL12_04169
symbol: EME76138.1
gene_biotype: protein_coding
description:
  Thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2.


ensembl_gene_id: BSONL12_04174
symbol: ThiD
gene_biotype: protein_coding
description:
  Bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase; COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase.


ensembl_gene_id: BSONL12_04269
symbol: EME76158.1
gene_biotype: protein_coding
description:
  Hypothetical protein; COG1514 2'-5' RNA ligase; Belongs to the 2H phosphoesterase superfamily. YjcG family.


ensembl_gene_id: BSONL12_04389
symbol: EME76182.1
gene_biotype: protein_coding
description:
  SPBc2 prophage-derived HTH-type transcriptional regulator YonR; COG1396 Predicted transcriptional regulators.


ensembl_gene_id: BSONL12_04464
symbol: EME76197.1
gene_biotype: protein_coding
description:
  Ribonucleotide-diphosphate reductase subunit alpha; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.


ensembl_gene_id: BSONL12_04469
symbol: nrdF
gene_biotype: protein_coding
description:
  Ribonucleotide-diphosphate reductase subunit beta; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family.


ensembl_gene_id: BSONL12_04474
symbol: EME76199.1
gene_biotype: protein_coding
description:
  Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA.


ensembl_gene_id: BSONL12_04484
symbol: thyX
gene_biotype: protein_coding
description:
  Thymidylate synthase, flavin-dependent; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant.


ensembl_gene_id: BSONL12_04519
symbol: EME76208.1
gene_biotype: protein_coding
description:
  RNA polymerase sigma factor sigK Sigma-K factor; COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog.


ensembl_gene_id: BSONL12_04698
symbol: EME75584.1
gene_biotype: protein_coding
description:
  ExsB family protein; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Belongs to the QueC family.


ensembl_gene_id: BSONL12_04703
symbol: EME75585.1
gene_biotype: protein_coding
description:
  Hypothetical protein; COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases.


ensembl_gene_id: BSONL12_04728
symbol: ManX
gene_biotype: protein_coding
description:
  PTS system mannost-specific transporter subunits IIAB; COG2893 Phosphotransferase system, mannose/fructose-specific component IIA.


ensembl_gene_id: BSONL12_04733
symbol: EME75591.1
gene_biotype: protein_coding
description:
  PTS system mannose-specific transporter subunit IIC; COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC.


ensembl_gene_id: BSONL12_04738
symbol: EME75592.1
gene_biotype: protein_coding
description:
  PTS system mannose family transporter subunit IID; COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID.


ensembl_gene_id: BSONL12_04798
symbol: EME75604.1
gene_biotype: protein_coding
description:
  TrkA-C domain-containing protein; COG0490 Putative regulatory, ligand-binding protein related to C-terminal domains of K+ channels.


ensembl_gene_id: BSONL12_04818
symbol: EME75608.1
gene_biotype: protein_coding
description:
  Alanine racemase 2; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.


ensembl_gene_id: BSONL12_04833
symbol: EME75611.1
gene_biotype: protein_coding
description:
  Deoxyuridine 5'-triphosphate nucleotidohydrolase superfamily protein; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA.


ensembl_gene_id: BSONL12_04843
symbol: AdhP
gene_biotype: protein_coding
description:
  Ethanol-active dehydrogenase/acetaldehyde-active reductase; COG1064 Zn-dependent alcohol dehydrogenases.


ensembl_gene_id: BSONL12_04883
symbol: ButA
gene_biotype: protein_coding
description:
  Acetoin reductase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).


ensembl_gene_id: BSONL12_04938
symbol: SpeG
gene_biotype: protein_coding
description:
  Spermidine N1-acetyltransferase; COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins.


ensembl_gene_id: BSONL12_04993
symbol: thyA
gene_biotype: protein_coding
description:
  Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis.


ensembl_gene_id: BSONL12_05003
symbol: lexA
gene_biotype: protein_coding
description:
  LexA repressor; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair.


ensembl_gene_id: BSONL12_05008
symbol: yneA
gene_biotype: protein_coding
description:
  Cell division suppressor protein YneA; Inhibits cell division during the SOS response. Affects a later stage of the cell division protein assembly, after the assembly of the Z ring, by probably suppressing recruitment of FtsL and/or DivIC to the division machinery; Belongs to the YneA family.


ensembl_gene_id: BSONL12_05023
symbol: TktA
gene_biotype: protein_coding
description:
  Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.


ensembl_gene_id: BSONL12_05118
symbol: plsY
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate acyltransferase PlsY; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.


ensembl_gene_id: BSONL12_05128
symbol: parE
gene_biotype: protein_coding
description:
  DNA topoisomerase IV subunit B; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 2 subfamily.


ensembl_gene_id: BSONL12_05133
symbol: parC
gene_biotype: protein_coding
description:
  DNA topoisomerase IV subunit A; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase GyrA/ParC subunit family. ParC type 2 subfamily.


ensembl_gene_id: BSONL12_05158
symbol: EME75676.1
gene_biotype: protein_coding
description:
  D-arabinose-proton symporter AraT; COG0477 Permeases of the major facilitator superfamily; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.


ensembl_gene_id: BSONL12_05213
symbol: narG
gene_biotype: protein_coding
description:
  COG5013 Nitrate reductase alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: BSONL12_05243
symbol: EME75693.1
gene_biotype: protein_coding
description:
  Regulator Fnr; COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases.


ensembl_gene_id: BSONL12_05258
symbol: EME75696.1
gene_biotype: protein_coding
description:
  Regulator; COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases.


ensembl_gene_id: BSONL12_05268
symbol: EME75698.1
gene_biotype: protein_coding
description:
  Regulator ScdA; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family.


ensembl_gene_id: BSONL12_05288
symbol: ssuB-2
gene_biotype: protein_coding
description:
  Nitrate/sulfonate/bicarbonate ABC transporter ATP-binding protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.


ensembl_gene_id: BSONL12_05298
symbol: EME75704.1
gene_biotype: protein_coding
description:
  Nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein; COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components.


ensembl_gene_id: BSONL12_05318
symbol: EME75708.1
gene_biotype: protein_coding
description:
  NADH-dependent flavin oxidoreductase, oye family protein; COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family.


ensembl_gene_id: BSONL12_05348
symbol: NdhF
gene_biotype: protein_coding
description:
  COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit.


ensembl_gene_id: BSONL12_05388
symbol: EME75722.1
gene_biotype: protein_coding
description:
  Hypothetical protein; COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs.


ensembl_gene_id: BSONL12_05398
symbol: EME75724.1
gene_biotype: protein_coding
description:
  Glycine betaine/L-proline ABC transporter binding protein; COG1174 ABC-type proline/glycine betaine transport systems, permease component.


ensembl_gene_id: BSONL12_05403
symbol: EME75725.1
gene_biotype: protein_coding
description:
  Glycine betaine/carnitine/choline transport ATP-binding protein; COG1125 ABC-type proline/glycine betaine transport systems, ATPase components.


ensembl_gene_id: BSONL12_05438
symbol: Yhb1
gene_biotype: protein_coding
description:
  Bifunctional nitric oxide dioxygenase/dihydropteridine reductase 2; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.


ensembl_gene_id: BSONL12_05458
symbol: FadB
gene_biotype: protein_coding
description:
  COG1024 Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.


ensembl_gene_id: BSONL12_05463
symbol: iolA
gene_biotype: protein_coding
description:
  Methylmalonic acid semialdehyde dehydrogenase; Catalyzes the oxidation of malonate semialdehyde (MSA) and methylmalonate semialdehyde (MMSA) into acetyl-CoA and propanoyl-CoA, respectively.


ensembl_gene_id: BSONL12_05468
symbol: GarR
gene_biotype: protein_coding
description:
  Hypothetical protein; COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases.


ensembl_gene_id: BSONL12_05503
symbol: EME75745.1
gene_biotype: protein_coding
description:
  PTS system mannose-specific transporter subunits IIBCA; COG1445 Phosphotransferase system fructose-specific component IIB.


ensembl_gene_id: BSONL12_05513
symbol: EME75747.1
gene_biotype: protein_coding
description:
  Small multidrug resistance protein; COG2076 Membrane transporters of cations and cationic drugs; overlaps another CDS with the same product name.


ensembl_gene_id: BSONL12_05543
symbol: EME75753.1
gene_biotype: protein_coding
description:
  Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.


ensembl_gene_id: BSONL12_05553
symbol: EME75755.1
gene_biotype: protein_coding
description:
  Transmembrane protein; COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component.


ensembl_gene_id: BSONL12_05578
symbol: EME75760.1
gene_biotype: protein_coding
description:
  Arsenical pump membrane protein; Involved in arsenical resistance. Thought to form the channel of an arsenite pump; Belongs to the ArsB family.


ensembl_gene_id: BSONL12_05613
symbol: PflA
gene_biotype: protein_coding
description:
  Pyruvate formate-lyase-activating enzyme; Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine; Belongs to the organic radical-activating enzymes family.


ensembl_gene_id: BSONL12_05653
symbol: EME75775.1
gene_biotype: protein_coding
description:
  methylcrotonoyl-CoA carboxylase YngE; COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta).


ensembl_gene_id: BSONL12_05688
symbol: proA-2
gene_biotype: protein_coding
description:
  Gamma-glutamyl phosphate reductase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.


ensembl_gene_id: BSONL12_05693
symbol: proB
gene_biotype: protein_coding
description:
  Gamma-glutamyl kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.


ensembl_gene_id: BSONL12_05698
symbol: proC
gene_biotype: protein_coding
description:
  Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.


ensembl_gene_id: BSONL12_05713
symbol: sat
gene_biotype: protein_coding
description:
  COG2046 ATP sulfurylase (sulfate adenylyltransferase); Belongs to the sulfate adenylyltransferase family.


ensembl_gene_id: BSONL12_05728
symbol: cysH
gene_biotype: protein_coding
description:
  Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.


ensembl_gene_id: BSONL12_05743
symbol: EME75791.1
gene_biotype: protein_coding
description:
  Mandelate racemase YitF; COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily; Belongs to the mandelate racemase/muconate lactonizing enzyme family.


ensembl_gene_id: BSONL12_05798
symbol: EME75802.1
gene_biotype: protein_coding
description:
  ABC transporter permease; COG1132 ABC-type multidrug transport system, ATPase and permease components.


ensembl_gene_id: BSONL12_05803
symbol: EME75803.1
gene_biotype: protein_coding
description:
  ABC transporter ATP-binding protein; COG1132 ABC-type multidrug transport system, ATPase and permease components.


ensembl_gene_id: BSONL12_05818
symbol: fabG
gene_biotype: protein_coding
description:
  3-ketoacyl-(acyl-carrier-protein) reductase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: BSONL12_05828
symbol: NapA
gene_biotype: protein_coding
description:
  Molybdopterin oxidoreductase YoaE; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: BSONL12_05833
symbol: EME75809.1
gene_biotype: protein_coding
description:
  Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.


ensembl_gene_id: BSONL12_05878
symbol: EME75818.1
gene_biotype: protein_coding
description:
  Antibiotics ABC transporter ATP-binding protein VmlR; COG0488 ATPase components of ABC transporters with duplicated ATPase domains.


ensembl_gene_id: BSONL12_05908
symbol: thiL
gene_biotype: protein_coding
description:
  Thiamine monophosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family.


ensembl_gene_id: BSONL12_05918
symbol: EME75350.1
gene_biotype: protein_coding
description:
  Glycoprotein endopeptidase YdiC; COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone.


ensembl_gene_id: BSONL12_05923
symbol: RimI
gene_biotype: protein_coding
description:
  Ribosomal-protein-alanine acetyltransferase YdiD; Acetylates the N-terminal alanine of ribosomal protein S18.


ensembl_gene_id: BSONL12_05928
symbol: tsaD
gene_biotype: protein_coding
description:
  UGMP family protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.


ensembl_gene_id: BSONL12_05933
symbol: EME75353.1
gene_biotype: protein_coding
description:
  ABC transporter ATP-binding protein YdiF; COG0488 ATPase components of ABC transporters with duplicated ATPase domains.


ensembl_gene_id: BSONL12_05938
symbol: moaC
gene_biotype: protein_coding
description:
  Molybdenum cofactor biosynthesis protein MoaC; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family.


ensembl_gene_id: BSONL12_05943
symbol: rex
gene_biotype: protein_coding
description:
  Redox-sensing transcriptional repressor Rex; Modulates transcription in response to changes in cellular NADH/NAD(+) redox state.


ensembl_gene_id: BSONL12_05948
symbol: tatA
gene_biotype: protein_coding
description:
  Twin arginine translocase protein A; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.


ensembl_gene_id: BSONL12_05953
symbol: tatC
gene_biotype: protein_coding
description:
  Twin-arginine translocase component TatCY; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes.


ensembl_gene_id: BSONL12_05968
symbol: groES
gene_biotype: protein_coding
description:
  Co-chaperonin GroES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.


ensembl_gene_id: BSONL12_05973
symbol: groEL
gene_biotype: protein_coding
description:
  Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.


ensembl_gene_id: BSONL12_05983
symbol: EME75363.1
gene_biotype: protein_coding
description:
  Hypothetical protein; COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases).


ensembl_gene_id: BSONL12_06038
symbol: EME75374.1
gene_biotype: protein_coding
description:
  DNA-dependent DNA polymerase, family A; COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains.


ensembl_gene_id: BSONL12_06073
symbol: EME75381.1
gene_biotype: protein_coding
description:
  SWI/SNF chromatin-remodeling complex subunit snf22; COG0553 Superfamily II DNA/RNA helicases, SNF2 family.


ensembl_gene_id: BSONL12_06298
symbol: DltE
gene_biotype: protein_coding
description:
  Oxidoreductase DltE; COG3967 Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein); Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: BSONL12_06303
symbol: PnbA
gene_biotype: protein_coding
description:
  Para-nitrobenzyl esterase PnbA; COG2272 Carboxylesterase type B; Belongs to the type-B carboxylesterase/lipase family.


ensembl_gene_id: BSONL12_06323
symbol: EME75431.1
gene_biotype: protein_coding
description:
  Hypothetical protein; COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases.


ensembl_gene_id: BSONL12_06343
symbol: FabF
gene_biotype: protein_coding
description:
  3-oxoacyl-(acyl-carrier-protein) synthase 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.


ensembl_gene_id: BSONL12_06403
symbol: EME75443.1
gene_biotype: protein_coding
description:
  Maltodextrin ABC transporter substrate-binding protein MdxE; COG2182 Maltose-binding periplasmic proteins/domains.


ensembl_gene_id: BSONL12_06408
symbol: EME75444.1
gene_biotype: protein_coding
description:
  Maltodextrin ABC transporter permease MdxF; COG1175 ABC-type sugar transport systems, permease components.


ensembl_gene_id: BSONL12_06458
symbol: EME75454.1
gene_biotype: protein_coding
description:
  Transcription regulator, Cro/CI family -related protein; COG3655 Predicted transcriptional regulator.


ensembl_gene_id: BSONL12_06488
symbol: EME75460.1
gene_biotype: protein_coding
description:
  NAD(P)-dependent epimerase/dehydratase YhfK; COG0702 Predicted nucleoside-diphosphate-sugar epimerases.


ensembl_gene_id: BSONL12_06508
symbol: EME75464.1
gene_biotype: protein_coding
description:
  Cation efflux protein YeaB; COG0053 Predicted Co/Zn/Cd cation transporters; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.


ensembl_gene_id: BSONL12_06518
symbol: EME75466.1
gene_biotype: protein_coding
description:
  Hypothetical protein; COG1721 Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain).


ensembl_gene_id: BSONL12_06558
symbol: purE
gene_biotype: protein_coding
description:
  Phosphoribosylaminoimidazole carboxylase catalytic subunit; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).


ensembl_gene_id: BSONL12_06563
symbol: purK
gene_biotype: protein_coding
description:
  Phosphoribosylaminoimidazole carboxylase ATPase subunit; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR).


ensembl_gene_id: BSONL12_06573
symbol: purC
gene_biotype: protein_coding
description:
  COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase; Belongs to the SAICAR synthetase family.


ensembl_gene_id: BSONL12_06578
symbol: purS
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase subunit PurS; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought  [...]


ensembl_gene_id: BSONL12_06583
symbol: purQ
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase I; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to assist i [...]


ensembl_gene_id: BSONL12_06588
symbol: purL
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase II; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to assist  [...]


ensembl_gene_id: BSONL12_06593
symbol: purF
gene_biotype: protein_coding
description:
  Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.


ensembl_gene_id: BSONL12_06603
symbol: purN
gene_biotype: protein_coding
description:
  Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.


ensembl_gene_id: BSONL12_06608
symbol: purH
gene_biotype: protein_coding
description:
  Bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful).


ensembl_gene_id: BSONL12_06648
symbol: pcrB
gene_biotype: protein_coding
description:
  Geranylgeranylglyceryl phosphate synthase-like protein; Prenyltransferase that catalyzes in vivo the transfer of the heptaprenyl moiety of heptaprenyl pyrophosphate (HepPP; 35 carbon atoms) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P), producing heptaprenylglyceryl phosphate (HepGP). This reaction is an ether-bond- formation step in the biosynthesis of archaea-type G1P-based membrane lipids found in Bacillales.


ensembl_gene_id: BSONL12_06658
symbol: ligA
gene_biotype: protein_coding
description:
  NAD-dependent DNA ligase LigA; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA; Belongs to the NAD-dependent DNA ligase family. LigA subfamily.


ensembl_gene_id: BSONL12_06718
symbol: EME75506.1
gene_biotype: protein_coding
description:
  Sodium/proline symporter OpuE; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.


ensembl_gene_id: BSONL12_06723
symbol: gatC
gene_biotype: protein_coding
description:
  asparaginyl/glutamyl-tRNA amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.


ensembl_gene_id: BSONL12_06728
symbol: gatA
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).


ensembl_gene_id: BSONL12_06733
symbol: gatB
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily.


ensembl_gene_id: BSONL12_06738
symbol: GmuG
gene_biotype: protein_coding
description:
  Mannan endo-1,4-beta-mannosidase GmuG; COG4124 Beta-mannanase; Belongs to the glycosyl hydrolase 26 family.


ensembl_gene_id: BSONL12_06753
symbol: EME75513.1
gene_biotype: protein_coding
description:
  Acriflavin resistance protein; COG0841 Cation/multidrug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: BSONL12_06758
symbol: RimJ
gene_biotype: protein_coding
description:
  acyl-CoA N-acyltransferase; COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins.


ensembl_gene_id: BSONL12_06773
symbol: RumA
gene_biotype: protein_coding
description:
  RumA-like 23S rRNA methyltransferase YefA; COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.


ensembl_gene_id: BSONL12_06788
symbol: EME75520.1
gene_biotype: protein_coding
description:
  COG4096 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases.


ensembl_gene_id: BSONL12_06813
symbol: BglA
gene_biotype: protein_coding
description:
  Glycoside hydrolase family protein; COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase; Belongs to the glycosyl hydrolase 1 family.


ensembl_gene_id: BSONL12_06873
symbol: EME75537.1
gene_biotype: protein_coding
description:
  LysR family malolactic regulator; COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: BSONL12_06898
symbol: EME75542.1
gene_biotype: protein_coding
description:
  ABC transporter ATP-binding protein YfmR; COG0488 ATPase components of ABC transporters with duplicated ATPase domains.


ensembl_gene_id: BSONL12_06933
symbol: bioW
gene_biotype: protein_coding
description:
  6-carboxyhexanoate--CoA ligase; Catalyzes the transformation of pimelate into pimeloyl-CoA with concomitant hydrolysis of ATP to AMP.


ensembl_gene_id: BSONL12_06938
symbol: bioA
gene_biotype: protein_coding
description:
  Adenosylmethionine--8-amino-7-oxononanoate transaminase; Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. BioA subfamily.


ensembl_gene_id: BSONL12_06943
symbol: BioF
gene_biotype: protein_coding
description:
  8-amino-7-oxononanoate synthase; Catalyzes the decarboxylative condensation of pimeloyl-[acyl- carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide.


ensembl_gene_id: BSONL12_06948
symbol: bioD
gene_biotype: protein_coding
description:
  Dithiobiotin synthetase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring.


ensembl_gene_id: BSONL12_06953
symbol: bioB
gene_biotype: protein_coding
description:
  Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.


ensembl_gene_id: BSONL12_07033
symbol: EME75566.1
gene_biotype: protein_coding
description:
  Nitric-oxide synthase; Catalyzes the production of nitric oxide. Belongs to the NOS family. Bacterial NOS oxygenase subfamily.


ensembl_gene_id: BSONL12_07053
symbol: EME75568.1
gene_biotype: protein_coding
description:
  Immunity protein SdpI; Immunity protein that provides protection for the cell against the toxic effects of SDP, its own SdpC-derived killing factor, and that functions as a receptor/signal transduction protein as well. Once SDP accumulates in the extracellular milieu, SdpI binds to SDP, causing sequestration of SdpR at the bacterial membrane.


ensembl_gene_id: BSONL12_07083
symbol: map
gene_biotype: protein_coding
description:
  Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.


ensembl_gene_id: BSONL12_07088
symbol: EME75575.1
gene_biotype: protein_coding
description:
  Polyglycerolphosphate lipoteichoic acid synthase LtaS; COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily; Belongs to the LTA synthase family.


ensembl_gene_id: BSONL12_07103
symbol: TreB
gene_biotype: protein_coding
description:
  PTS system trehalose-specific transporter subunits IIBC; COG1264 Phosphotransferase system IIB components.


ensembl_gene_id: BSONL12_07142
symbol: EME74748.1
gene_biotype: protein_coding
description:
  Linear gramicidin dehydrogenase LgrE; COG3208 Predicted thioesterase involved in non-ribosomal peptide biosynthesis.


ensembl_gene_id: BSONL12_07167
symbol: EME74753.1
gene_biotype: protein_coding
description:
  COG0300 Short-chain dehydrogenases of various substrate specificities; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: BSONL12_07187
symbol: namA
gene_biotype: protein_coding
description:
  NADPH dehydrogenase NamA; Catalyzes the reduction of the double bond of an array of alpha,beta-unsaturated aldehydes and ketones. It also reduces the nitro group of nitroester and nitroaromatic compounds. It could have a role in detoxification processes; Belongs to the NADH:flavin oxidoreductase/NADH oxidase family. NamA subfamily.


ensembl_gene_id: BSONL12_07192
symbol: EME74758.1
gene_biotype: protein_coding
description:
  Hypothetical protein; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).


ensembl_gene_id: BSONL12_07202
symbol: rnz
gene_biotype: protein_coding
description:
  Ribonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family.


ensembl_gene_id: BSONL12_07207
symbol: zwf
gene_biotype: protein_coding
description:
  Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.


ensembl_gene_id: BSONL12_07212
symbol: EME74762.1
gene_biotype: protein_coding
description:
  Tripartite ATP-independent dicarboxylate transporter large subunit 2; COG4666 TRAP-type uncharacterized transport system, fused permease components.


ensembl_gene_id: BSONL12_07222
symbol: EME74764.1
gene_biotype: protein_coding
description:
  Tripartite ATP-independent dicarboxylate transporter solute-binding protein; COG2358 TRAP-type uncharacterized transport system, periplasmic component.


ensembl_gene_id: BSONL12_07232
symbol: EME74766.1
gene_biotype: protein_coding
description:
  COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase; Belongs to the glycosyl hydrolase 1 family.


ensembl_gene_id: BSONL12_07257
symbol: EME74771.1
gene_biotype: protein_coding
description:
  Glucose-1-dehydrogenase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).


ensembl_gene_id: BSONL12_07262
symbol: GntZ
gene_biotype: protein_coding
description:
  6-phosphogluconate dehydrogenase; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.


ensembl_gene_id: BSONL12_07267
symbol: dinB
gene_biotype: protein_coding
description:
  DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.


ensembl_gene_id: BSONL12_07277
symbol: yidC
gene_biotype: protein_coding
description:
  OxaA-like protein precursor; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins; Belongs to the OXA1/ALB3/YidC family. Type 2 subfamily.


ensembl_gene_id: BSONL12_07292
symbol: PccB
gene_biotype: protein_coding
description:
  propionyl-CoA carboxylase YqjD; COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta).


ensembl_gene_id: BSONL12_07302
symbol: EME74780.1
gene_biotype: protein_coding
description:
  High affinity arginine ABC transporter ATP-binding protein ArtR; COG1126 ABC-type polar amino acid transport system, ATPase component.


ensembl_gene_id: BSONL12_07307
symbol: EME74781.1
gene_biotype: protein_coding
description:
  High affinity arginine ABC transporter permease ArtQ; COG0765 ABC-type amino acid transport system, permease component.


ensembl_gene_id: BSONL12_07312
symbol: EME74782.1
gene_biotype: protein_coding
description:
  High affinity arginine ABC transporter binding lipoprotein; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.


ensembl_gene_id: BSONL12_07322
symbol: EME74784.1
gene_biotype: protein_coding
description:
  Diacylglycerol/lipid kinase BmrU; COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase.


ensembl_gene_id: BSONL12_07327
symbol: BkdB
gene_biotype: protein_coding
description:
  Branched-chain alpha-keto acid dehydrogenase subunit E2; COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes.


ensembl_gene_id: BSONL12_07332
symbol: EME74786.1
gene_biotype: protein_coding
description:
  2-oxoisovalerate dehydrogenase E1 subunit beta BkdAB; COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit.


ensembl_gene_id: BSONL12_07337
symbol: EME74787.1
gene_biotype: protein_coding
description:
  2-oxoisovalerate dehydrogenase E1 subunit alpha BkdAA; COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit.


ensembl_gene_id: BSONL12_07342
symbol: EME74788.1
gene_biotype: protein_coding
description:
  COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes.


ensembl_gene_id: BSONL12_07352
symbol: EME74790.1
gene_biotype: protein_coding
description:
  COG0334 Glutamate dehydrogenase/leucine dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.


ensembl_gene_id: BSONL12_07412
symbol: EME74802.1
gene_biotype: protein_coding
description:
  Phosphorelay regulator Spo0A; May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process.


ensembl_gene_id: BSONL12_07437
symbol: dxs
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.


ensembl_gene_id: BSONL12_07442
symbol: GgpS
gene_biotype: protein_coding
description:
  (2E,6E)-farnesyl diphosphate synthase IspA; COG0142 Geranylgeranyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family.


ensembl_gene_id: BSONL12_07447
symbol: xseB
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.


ensembl_gene_id: BSONL12_07452
symbol: xseA
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.


ensembl_gene_id: BSONL12_07457
symbol: folD
gene_biotype: protein_coding
description:
  Methenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.


ensembl_gene_id: BSONL12_07462
symbol: nusB
gene_biotype: protein_coding
description:
  Transcription antitermination protein NusB; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.


ensembl_gene_id: BSONL12_07472
symbol: AccC
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase biotin carboxylase subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: BSONL12_07477
symbol: EME74815.1
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase biotin carboxyl carrier protein subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: BSONL12_07527
symbol: efp
gene_biotype: protein_coding
description:
  Elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.


ensembl_gene_id: BSONL12_07537
symbol: aroQ
gene_biotype: protein_coding
description:
  3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.


ensembl_gene_id: BSONL12_07557
symbol: EME74831.1
gene_biotype: protein_coding
description:
  Acyl hydrolase/lysophospholipase YqhO; COG1752 Predicted esterase of the alpha-beta hydrolase superfamily.


ensembl_gene_id: BSONL12_07562
symbol: mntR
gene_biotype: protein_coding
description:
  Manganese transport transcriptional regulator; Central regulator of manganese homeostasis. Belongs to the DtxR/MntR family.


ensembl_gene_id: BSONL12_07567
symbol: lipM
gene_biotype: protein_coding
description:
  Octanoyltransferase LipM; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domain of GcvH, an intermediate carrier during protein lipoylation.


ensembl_gene_id: BSONL12_07577
symbol: gcvPB
gene_biotype: protein_coding
description:
  Glycine dehydrogenase subunit 2; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. C-terminal subunit subfamily.


ensembl_gene_id: BSONL12_07582
symbol: gcvPA
gene_biotype: protein_coding
description:
  Glycine dehydrogenase subunit 1; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein.


ensembl_gene_id: BSONL12_07587
symbol: gcvT
gene_biotype: protein_coding
description:
  Glycine cleavage system aminomethyltransferase T; The glycine cleavage system catalyzes the degradation of glycine.


ensembl_gene_id: BSONL12_07677
symbol: EME74855.1
gene_biotype: protein_coding
description:
  Hypothetical protein; COG1393 Arsenate reductase and related proteins, glutaredoxin family; Belongs to the ArsC family.


ensembl_gene_id: BSONL12_07712
symbol: EME74862.1
gene_biotype: protein_coding
description:
  Hydroxamate siderophore ABC transporter substrate-binding protein FhuD; COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component.


ensembl_gene_id: BSONL12_07717
symbol: EME74863.1
gene_biotype: protein_coding
description:
  Polyglycerolphosphate lipoteichoic acid synthase YqgS; COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily; Belongs to the LTA synthase family.


ensembl_gene_id: BSONL12_07727
symbol: EME74865.1
gene_biotype: protein_coding
description:
  Single-stranded nucleic acid binding protein YqgQ; COG4483 Uncharacterized protein conserved in bacteria.


ensembl_gene_id: BSONL12_07747
symbol: EME74869.1
gene_biotype: protein_coding
description:
  COG0212 5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.


ensembl_gene_id: BSONL12_07777
symbol: pstB
gene_biotype: protein_coding
description:
  Phosphate ABC transporter ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.


ensembl_gene_id: BSONL12_07792
symbol: EME74878.1
gene_biotype: protein_coding
description:
  Phosphate ABC transporter permease; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: BSONL12_07797
symbol: EME74879.1
gene_biotype: protein_coding
description:
  Phosphate ABC transporter substrate-binding protein; COG0226 ABC-type phosphate transport system, periplasmic component.


ensembl_gene_id: BSONL12_07812
symbol: Sod2
gene_biotype: protein_coding
description:
  Superoxide dismutase SodA; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.


ensembl_gene_id: BSONL12_07832
symbol: ispG
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family.


ensembl_gene_id: BSONL12_07847
symbol: EME74889.1
gene_biotype: protein_coding
description:
  Zinc-specific metallo-regulatory protein Zur; COG0735 Fe2+/Zn2+ uptake regulation proteins; Belongs to the Fur family.


ensembl_gene_id: BSONL12_07852
symbol: EME74890.1
gene_biotype: protein_coding
description:
  Zinc ABC-transporter permease YceA; COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components.


ensembl_gene_id: BSONL12_07857
symbol: ZnuC
gene_biotype: protein_coding
description:
  Zinc ABC transporter ATP-binding protein YcdI; COG1121 ABC-type Mn/Zn transport systems, ATPase component.


ensembl_gene_id: BSONL12_07872
symbol: nfo
gene_biotype: protein_coding
description:
  Endonuclease IV; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin.


ensembl_gene_id: BSONL12_07877
symbol: cshB
gene_biotype: protein_coding
description:
  DEAD/DEAH box helicase; Probable DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures.


ensembl_gene_id: BSONL12_07887
symbol: ispH
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.


ensembl_gene_id: BSONL12_07902
symbol: nfi
gene_biotype: protein_coding
description:
  Deoxyribonuclease V; DNA repair enzyme involved in the repair of deaminated bases. Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA.


ensembl_gene_id: BSONL12_07927
symbol: sigA
gene_biotype: protein_coding
description:
  RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.


ensembl_gene_id: BSONL12_07932
symbol: dnaG
gene_biotype: protein_coding
description:
  DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.


ensembl_gene_id: BSONL12_07942
symbol: EME74908.1
gene_biotype: protein_coding
description:
  PEP synthetase regulatory protein; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation/dephosphorylation.


ensembl_gene_id: BSONL12_07972
symbol: era
gene_biotype: protein_coding
description:
  GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.


ensembl_gene_id: BSONL12_07977
symbol: EME74915.1
gene_biotype: protein_coding
description:
  Cytidine/deoxycytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: BSONL12_07987
symbol: ybeY
gene_biotype: protein_coding
description:
  Metal-binding heat shock protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.


ensembl_gene_id: BSONL12_07992
symbol: EME74918.1
gene_biotype: protein_coding
description:
  Metal-dependent phosphohydrolase YqfF; COG1480 Predicted membrane-associated HD superfamily hydrolase.


ensembl_gene_id: BSONL12_08052
symbol: RsmE
gene_biotype: protein_coding
description:
  16S ribosomal RNA methyltransferase RsmE; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.


ensembl_gene_id: BSONL12_08057
symbol: prmA
gene_biotype: protein_coding
description:
  Ribosomal protein L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family.


ensembl_gene_id: BSONL12_08062
symbol: dnaJ
gene_biotype: protein_coding
description:
  Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...]


ensembl_gene_id: BSONL12_08072
symbol: grpE
gene_biotype: protein_coding
description:
  Heat shock protein GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP- [...]


ensembl_gene_id: BSONL12_08077
symbol: hrcA
gene_biotype: protein_coding
description:
  Heat-inducible transcription repressor; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons.


ensembl_gene_id: BSONL12_08082
symbol: HemN
gene_biotype: protein_coding
description:
  Coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: BSONL12_08087
symbol: lepA
gene_biotype: protein_coding
description:
  GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.


ensembl_gene_id: BSONL12_08102
symbol: gpr
gene_biotype: protein_coding
description:
  Germination protease; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.


ensembl_gene_id: BSONL12_08147
symbol: rsfS
gene_biotype: protein_coding
description:
  Hypothetical protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.


ensembl_gene_id: BSONL12_08157
symbol: nadD
gene_biotype: protein_coding
description:
  Nicotinic acid mononucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).


ensembl_gene_id: BSONL12_08167
symbol: aroE
gene_biotype: protein_coding
description:
  Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).


ensembl_gene_id: BSONL12_08227
symbol: EME74963.1
gene_biotype: protein_coding
description:
  Sporulation sigma factor SigK; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: BSONL12_08232
symbol: EME74964.1
gene_biotype: protein_coding
description:
  GCN5-like N-acetyltransferase; COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins.


ensembl_gene_id: BSONL12_08252
symbol: EME74968.1
gene_biotype: protein_coding
description:
  PrpF protein involved in 2-methylcitrate cycle; COG2828 Uncharacterized protein conserved in bacteria.


ensembl_gene_id: BSONL12_08287
symbol: EME74975.1
gene_biotype: protein_coding
description:
  COG0842 ABC-type multidrug transport system, permease component; daunorubicin resistance transmembrane protein.


ensembl_gene_id: BSONL12_08312
symbol: trpA-2
gene_biotype: protein_coding
description:
  Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.


ensembl_gene_id: BSONL12_08342
symbol: IsdG
gene_biotype: protein_coding
description:
  Iron ABC transporter ATP-binding protein; COG2329 Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides.


ensembl_gene_id: BSONL12_08347
symbol: EME74987.1
gene_biotype: protein_coding
description:
  Iron ABC transporter ATP-binding protein; COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components.


ensembl_gene_id: BSONL12_08352
symbol: EME74988.1
gene_biotype: protein_coding
description:
  COG0609 ABC-type Fe3+-siderophore transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: BSONL12_08357
symbol: EME74989.1
gene_biotype: protein_coding
description:
  Iron ABC transporter binding protein; COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component.


ensembl_gene_id: BSONL12_08367
symbol: EME74991.1
gene_biotype: protein_coding
description:
  Ferrichrome ABC transporter ATP-binding protein; COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components.


ensembl_gene_id: BSONL12_08372
symbol: EME74992.1
gene_biotype: protein_coding
description:
  Iron ABC transporter membrane protein; COG0609 ABC-type Fe3+-siderophore transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: BSONL12_08377
symbol: EME74993.1
gene_biotype: protein_coding
description:
  Iron ABC transporter substrate-binding protein; COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component.


ensembl_gene_id: BSONL12_08402
symbol: EME74998.1
gene_biotype: protein_coding
description:
  FMN-binding split barrel protein; COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family.


ensembl_gene_id: BSONL12_08432
symbol: HxlB
gene_biotype: protein_coding
description:
  3-hexulose-6-phosphate isomerase HxlB; COG0794 Predicted sugar phosphate isomerase involved in capsule formation.


ensembl_gene_id: BSONL12_08477
symbol: EME75011.1
gene_biotype: protein_coding
description:
  Chitosanase; Aids in the defense against invading fungal pathogens by degrading their cell wall chitosan.


ensembl_gene_id: BSONL12_08482
symbol: EME75012.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid transport system II carrier protein; Component of the transport system for branched-chain amino acids.


ensembl_gene_id: BSONL12_08507
symbol: rhaD
gene_biotype: protein_coding
description:
  Rhamnulose-1-phosphate aldolase; Catalyzes the reversible cleavage of L-rhamnulose-1-phosphate to dihydroxyacetone phosphate (DHAP) and L-lactaldehyde.


ensembl_gene_id: BSONL12_08527
symbol: EME75021.1
gene_biotype: protein_coding
description:
  Short-chain dehydrogenase/reductase SDR; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: BSONL12_08562
symbol: EME75028.1
gene_biotype: protein_coding
description:
  6-phospho-alpha-glucosidase; COG1486 Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases.


ensembl_gene_id: BSONL12_08567
symbol: MalX
gene_biotype: protein_coding
description:
  PTS system glucose-specific transporter subunit IICBA; COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific.


ensembl_gene_id: BSONL12_08592
symbol: tyrS
gene_biotype: protein_coding
description:
  tyrosyl-tRNA ligase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 2 subfamily.


ensembl_gene_id: BSONL12_08607
symbol: GloB
gene_biotype: protein_coding
description:
  Metallo-beta-lactamase-like domain-containing protein; COG0491 Zn-dependent hydrolases, including glyoxylases.


ensembl_gene_id: BSONL12_08642
symbol: EME75042.1
gene_biotype: protein_coding
description:
  RocG protein; COG0334 Glutamate dehydrogenase/leucine dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.


ensembl_gene_id: BSONL12_08677
symbol: FruA
gene_biotype: protein_coding
description:
  Levanase; COG1621 Beta-fructosidases (levanase/invertase); Belongs to the glycosyl hydrolase 32 family.


ensembl_gene_id: BSONL12_08692
symbol: LevE
gene_biotype: protein_coding
description:
  Trigger enzyme fructose-specific phosphotransferase enzyme IIB component LevE; COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB.


ensembl_gene_id: BSONL12_08702
symbol: EME75054.1
gene_biotype: protein_coding
description:
  Sigma-54 interaction domain family protein; COG1221 Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain.


ensembl_gene_id: BSONL12_08722
symbol: EME75058.1
gene_biotype: protein_coding
description:
  Glyoxalase/bleomycin resistance protein/dioxygenase; COG0346 Lactoylglutathione lyase and related lyases.


ensembl_gene_id: BSONL12_08762
symbol: AdaB
gene_biotype: protein_coding
description:
  Methylated DNA-protein cysteine methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated.


ensembl_gene_id: BSONL12_08772
symbol: kdpC
gene_biotype: protein_coding
description:
  Potassium-transporting ATPase subunit C; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP-binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB/KdpC/ATP ternary complex.


ensembl_gene_id: BSONL12_08777
symbol: kdpB
gene_biotype: protein_coding
description:
  Potassium-transporting ATPase subunit B; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system. Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IA subfamily.


ensembl_gene_id: BSONL12_08782
symbol: kdpA
gene_biotype: protein_coding
description:
  Potassium-transporting ATPase subunit A; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane.


ensembl_gene_id: BSONL12_08787
symbol: DkgA
gene_biotype: protein_coding
description:
  2,5-diketo-D-gluconic acid reductase; COG0656 Aldo/keto reductases, related to diketogulonate reductase.


ensembl_gene_id: BSONL12_08827
symbol: EME75079.1
gene_biotype: protein_coding
description:
  Bifunctional cytochrome P450/NADPH-cytochrome P450 reductase YrhJ; COG2124 Cytochrome P450; In the N-terminal section; belongs to the cytochrome P450 family.


ensembl_gene_id: BSONL12_08887
symbol: mtnN
gene_biotype: protein_coding
description:
  5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase; Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'- methylthioribose and S-ribosylhomocysteine, respectively. Belongs to the PNP/UDP phosphorylase family. MtnN subfamily.


ensembl_gene_id: BSONL12_08912
symbol: greA
gene_biotype: protein_coding
description:
  Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.


ensembl_gene_id: BSONL12_08937
symbol: mltG
gene_biotype: protein_coding
description:
  Protein YrrL; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family.


ensembl_gene_id: BSONL12_08947
symbol: EME75103.1
gene_biotype: protein_coding
description:
  Holliday junction resolvase-like protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.


ensembl_gene_id: BSONL12_08957
symbol: alaS
gene_biotype: protein_coding
description:
  alanyl-tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.


ensembl_gene_id: BSONL12_08982
symbol: recD2
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease V subunit alpha; DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity; Belongs to the RecD family. RecD-like subfamily.


ensembl_gene_id: BSONL12_08992
symbol: mnmA
gene_biotype: protein_coding
description:
  tRNA-specific 2-thiouridylase MnmA; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.


ensembl_gene_id: BSONL12_08997
symbol: EME75113.1
gene_biotype: protein_coding
description:
  Cysteine desulfurase YrvO; COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes.


ensembl_gene_id: BSONL12_09007
symbol: EME75115.1
gene_biotype: protein_coding
description:
  Recombination factor protein RarA; COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase.


ensembl_gene_id: BSONL12_09022
symbol: EME75116.1
gene_biotype: protein_coding
description:
  Ubiquitin-activating enzyme YrvM; COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1.


ensembl_gene_id: BSONL12_09027
symbol: aspS
gene_biotype: protein_coding
description:
  aspartyl-tRNA ligase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.


ensembl_gene_id: BSONL12_09047
symbol: dtd
gene_biotype: protein_coding
description:
  D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family.


ensembl_gene_id: BSONL12_09052
symbol: RelA
gene_biotype: protein_coding
description:
  GTP pyrophosphokinase RelA; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.


ensembl_gene_id: BSONL12_09057
symbol: apt
gene_biotype: protein_coding
description:
  Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.


ensembl_gene_id: BSONL12_09072
symbol: EME75126.1
gene_biotype: protein_coding
description:
  Potassium transport accessory component; COG0490 Putative regulatory, ligand-binding protein related to C-terminal domains of K+ channels.


ensembl_gene_id: BSONL12_09077
symbol: secD
gene_biotype: protein_coding
description:
  Bifunctional preprotein translocase subunit SecD/SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.


ensembl_gene_id: BSONL12_09107
symbol: tgt
gene_biotype: protein_coding
description:
  Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form t [...]


ensembl_gene_id: BSONL12_09112
symbol: queA
gene_biotype: protein_coding
description:
  S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).


ensembl_gene_id: BSONL12_09122
symbol: ruvB
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.


ensembl_gene_id: BSONL12_09127
symbol: ruvA
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.


ensembl_gene_id: BSONL12_09192
symbol: nadA
gene_biotype: protein_coding
description:
  Quinolinate synthetase; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.


ensembl_gene_id: BSONL12_09212
symbol: EME75154.1
gene_biotype: protein_coding
description:
  Regulator of de-novo NAD biosynthesis NadR; COG1827 Predicted small molecule binding protein (contains 3H domain).


ensembl_gene_id: BSONL12_09227
symbol: obgE
gene_biotype: protein_coding
description:
  GTPase CgtA; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.


ensembl_gene_id: BSONL12_09247
symbol: rplU
gene_biotype: protein_coding
description:
  50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.


ensembl_gene_id: BSONL12_09277
symbol: minC
gene_biotype: protein_coding
description:
  Septum formation inhibitor; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family.


ensembl_gene_id: BSONL12_09302
symbol: EME75172.1
gene_biotype: protein_coding
description:
  Maf-like protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.


ensembl_gene_id: BSONL12_09312
symbol: ComC
gene_biotype: protein_coding
description:
  Processing protease ComC; COG1989 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases.


ensembl_gene_id: BSONL12_09322
symbol: valS
gene_biotype: protein_coding
description:
  valyl-tRNA ligase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.


ensembl_gene_id: BSONL12_09352
symbol: HemD
gene_biotype: protein_coding
description:
  Uroporphyrinogen III cosynthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.


ensembl_gene_id: BSONL12_09357
symbol: hemC
gene_biotype: protein_coding
description:
  Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.


ensembl_gene_id: BSONL12_09362
symbol: EME75184.1
gene_biotype: protein_coding
description:
  Protein HemX; COG0755 ABC-type transport system involved in cytochrome c biogenesis, permease component.


ensembl_gene_id: BSONL12_09367
symbol: hemA
gene_biotype: protein_coding
description:
  glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).


ensembl_gene_id: BSONL12_09377
symbol: engB
gene_biotype: protein_coding
description:
  GTP-binding protein YsxC; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.


ensembl_gene_id: BSONL12_09382
symbol: lon
gene_biotype: protein_coding
description:
  Class 3 heat-shock ATP-dependent protease LonA; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.


ensembl_gene_id: BSONL12_09392
symbol: clpX
gene_biotype: protein_coding
description:
  ATP-dependent protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.


ensembl_gene_id: BSONL12_09397
symbol: tig
gene_biotype: protein_coding
description:
  Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.


ensembl_gene_id: BSONL12_09407
symbol: leuD
gene_biotype: protein_coding
description:
  Isopropylmalate isomerase small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily.


ensembl_gene_id: BSONL12_09412
symbol: leuC
gene_biotype: protein_coding
description:
  Isopropylmalate isomerase large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.


ensembl_gene_id: BSONL12_09417
symbol: leuB
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.


ensembl_gene_id: BSONL12_09422
symbol: leuA
gene_biotype: protein_coding
description:
  2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily.


ensembl_gene_id: BSONL12_09427
symbol: ilvC
gene_biotype: protein_coding
description:
  Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate.


ensembl_gene_id: BSONL12_09437
symbol: EME75199.1
gene_biotype: protein_coding
description:
  COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase].


ensembl_gene_id: BSONL12_09442
symbol: ilvE
gene_biotype: protein_coding
description:
  Branched-chain amino acid aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: BSONL12_09497
symbol: RdgB
gene_biotype: protein_coding
description:
  Nucleoside-triphosphatase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.


ensembl_gene_id: BSONL12_09502
symbol: rph
gene_biotype: protein_coding
description:
  Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation.


ensembl_gene_id: BSONL12_09567
symbol: uvrC
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.


ensembl_gene_id: BSONL12_09607
symbol: mutS2
gene_biotype: protein_coding
description:
  Recombination and DNA strand exchange inhibitor protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.


ensembl_gene_id: BSONL12_09617
symbol: EME75235.1
gene_biotype: protein_coding
description:
  Transmembrane protein YshB; COG1286 Uncharacterized membrane protein, required for colicin V production.


ensembl_gene_id: BSONL12_09622
symbol: zapA
gene_biotype: protein_coding
description:
  Cell division protein ZapA; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.


ensembl_gene_id: BSONL12_09647
symbol: pheT
gene_biotype: protein_coding
description:
  phenylalanyl-tRNA ligase subunit beta; COG0073 EMAP domain; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.


ensembl_gene_id: BSONL12_09652
symbol: pheS
gene_biotype: protein_coding
description:
  COG0016 Phenylalanyl-tRNA synthetase alpha subunit; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.


ensembl_gene_id: BSONL12_09662
symbol: EME75244.1
gene_biotype: protein_coding
description:
  tRNA/rRNA methyltransferase YsgA; COG0566 rRNA methylases; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: BSONL12_09702
symbol: EME75252.1
gene_biotype: protein_coding
description:
  L-arabinose ABC transporter permease AraQ; COG0395 ABC-type sugar transport system, permease component.


ensembl_gene_id: BSONL12_09707
symbol: EME75253.1
gene_biotype: protein_coding
description:
  L-arabinose ABC transporter permease AraP; COG1175 ABC-type sugar transport systems, permease components.


ensembl_gene_id: BSONL12_09712
symbol: EME75254.1
gene_biotype: protein_coding
description:
  L-arabinose ABC transporter substrate-binding protein AraN; COG1653 ABC-type sugar transport system, periplasmic component.


ensembl_gene_id: BSONL12_09742
symbol: EME75258.1
gene_biotype: protein_coding
description:
  Arabinan endo-1,5-alpha-L-arabinosidase AbnA; COG3507 Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.


ensembl_gene_id: BSONL12_09762
symbol: rplT
gene_biotype: protein_coding
description:
  50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.


ensembl_gene_id: BSONL12_09772
symbol: infC
gene_biotype: protein_coding
description:
  Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.


ensembl_gene_id: BSONL12_09777
symbol: lrgB
gene_biotype: protein_coding
description:
  Antiholin-like protein LrgB; Inhibits the expression or activity of extracellular murein hydrolases by interacting, possibly with LrgA, with the holin-like protein CidA. The LrgAB and CidA proteins may affect the proton motive force of the membrane. May be involved in programmed cell death (PCD), possibly triggering PCD in response to antibiotics and environmental stresses; Belongs to the CidB/LrgB family. LrgB subfamily.


ensembl_gene_id: BSONL12_09812
symbol: thrS
gene_biotype: protein_coding
description:
  threonyl-tRNA ligase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr).


ensembl_gene_id: BSONL12_09837
symbol: nrdR
gene_biotype: protein_coding
description:
  Transcriptional regulator NrdR; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family.


ensembl_gene_id: BSONL12_09847
symbol: speH
gene_biotype: protein_coding
description:
  S-adenosylmethionine decarboxylase proenzyme; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the prokaryotic AdoMetDC family. Type 1 subfamily.


ensembl_gene_id: BSONL12_09852
symbol: EME75280.1
gene_biotype: protein_coding
description:
  COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: BSONL12_09857
symbol: coaE
gene_biotype: protein_coding
description:
  dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.


ensembl_gene_id: BSONL12_09867
symbol: mutM
gene_biotype: protein_coding
description:
  Formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates.


ensembl_gene_id: BSONL12_09872
symbol: polA
gene_biotype: protein_coding
description:
  DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.


ensembl_gene_id: BSONL12_09887
symbol: mdh
gene_biotype: protein_coding
description:
  Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.


ensembl_gene_id: BSONL12_09922
symbol: pfkA
gene_biotype: protein_coding
description:
  6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.


ensembl_gene_id: BSONL12_09927
symbol: accA
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase carboxyltransferase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.


ensembl_gene_id: BSONL12_09932
symbol: accD
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase subunit beta; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.


ensembl_gene_id: BSONL12_09962
symbol: EME75302.1
gene_biotype: protein_coding
description:
  Bifunctional oligoribonuclease/3',5'-bisphosphate nucleotidase NrnA; COG0618 Exopolyphosphatase-related proteins.


ensembl_gene_id: BSONL12_09982
symbol: EME75306.1
gene_biotype: protein_coding
description:
  COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold; Belongs to the UPF0173 family.


ensembl_gene_id: BSONL12_09987
symbol: fabG-2
gene_biotype: protein_coding
description:
  3-ketoacyl-(acyl-carrier-protein) reductase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).


ensembl_gene_id: BSONL12_10002
symbol: argG
gene_biotype: protein_coding
description:
  COG0137 Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.


ensembl_gene_id: BSONL12_10007
symbol: EME75311.1
gene_biotype: protein_coding
description:
  Molybdenum cofactor biosynthesis protein B; May be involved in the biosynthesis of molybdopterin. Belongs to the MoaB/Mog family.


ensembl_gene_id: BSONL12_10012
symbol: ackA
gene_biotype: protein_coding
description:
  Acetate kinase A/propionate kinase 2; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.


ensembl_gene_id: BSONL12_10022
symbol: tpx
gene_biotype: protein_coding
description:
  Lipid hydroperoxide peroxidase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Tpx subfamily.


ensembl_gene_id: BSONL12_10067
symbol: thiI
gene_biotype: protein_coding
description:
  Thiamine biosynthesis protein ThiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS.


ensembl_gene_id: BSONL12_10072
symbol: EME75324.1
gene_biotype: protein_coding
description:
  Cysteine desulfurase NifZ; COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes.


ensembl_gene_id: BSONL12_10077
symbol: EME75325.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid transport system carrier protein BraB; Component of the transport system for branched-chain amino acids.


ensembl_gene_id: BSONL12_10082
symbol: ezrA
gene_biotype: protein_coding
description:
  Septation ring formation regulator EzrA; Negative regulator of FtsZ ring formation; modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization; Belongs to the EzrA family.


ensembl_gene_id: BSONL12_10087
symbol: EME75327.1
gene_biotype: protein_coding
description:
  Histidinol-phosphatase; COG1387 Histidinol phosphatase and related hydrolases of the PHP family; Belongs to the PHP hydrolase family. HisK subfamily.


ensembl_gene_id: BSONL12_10107
symbol: rpsD
gene_biotype: protein_coding
description:
  30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.


ensembl_gene_id: BSONL12_10117
symbol: tyrS-2
gene_biotype: protein_coding
description:
  tyrosyl-tRNA ligase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily.


ensembl_gene_id: BSONL12_10127
symbol: AcuA
gene_biotype: protein_coding
description:
  Acetoin utilization protein AcuA; Part of the acuABC operon, which is possibly involved in the breakdown of acetoin and butanediol. Acts as an acetyltransferase inactivating acetyl-CoA synthetase AcsA via acetylation at a Lys residue.


ensembl_gene_id: BSONL12_10137
symbol: EME75337.1
gene_biotype: protein_coding
description:
  Acetoin utilization protein AcuC; COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein.


ensembl_gene_id: BSONL12_10177
symbol: EME75345.1
gene_biotype: protein_coding
description:
  General stress protein YtxG; COG4768 Uncharacterized protein containing a divergent version of the methyl-accepting chemotaxis-like domain.


ensembl_gene_id: BSONL12_10187
symbol: EME75347.1
gene_biotype: protein_coding
description:
  DNA translocase SftA; COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins; Belongs to the FtsK/SpoIIIE/SftA family.


ensembl_gene_id: BSONL12_10401
symbol: NikE
gene_biotype: protein_coding
description:
  Oligopeptide ABC transporter ATP-binding protein; COG1124 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component.


ensembl_gene_id: BSONL12_10411
symbol: EME74194.1
gene_biotype: protein_coding
description:
  ABC transporter permease; COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.


ensembl_gene_id: BSONL12_10416
symbol: EME74195.1
gene_biotype: protein_coding
description:
  ABC transporter permease; COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.


ensembl_gene_id: BSONL12_10421
symbol: EME74196.1
gene_biotype: protein_coding
description:
  ABC transporter substrate-binding protein; COG0747 ABC-type dipeptide transport system, periplasmic component.


ensembl_gene_id: BSONL12_10466
symbol: SspA
gene_biotype: protein_coding
description:
  Extracellular metalloprotease; COG3591 V8-like Glu-specific endopeptidase; Belongs to the peptidase S1B family.


ensembl_gene_id: BSONL12_10481
symbol: mutL
gene_biotype: protein_coding
description:
  DNA mismatch repair protein; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.


ensembl_gene_id: BSONL12_10486
symbol: mutS
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.


ensembl_gene_id: BSONL12_10501
symbol: miaB
gene_biotype: protein_coding
description:
  (dimethylallyl)adenosine tRNA methylthiotransferase; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.


ensembl_gene_id: BSONL12_10506
symbol: GcaT
gene_biotype: protein_coding
description:
  2-amino-3-ketobutyrate coenzyme A ligase; Catalyzes the decarboxylative condensation of pimeloyl-[acyl- carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide.


ensembl_gene_id: BSONL12_10511
symbol: tdh
gene_biotype: protein_coding
description:
  L-threonine 3-dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-threonine to 2- amino-3-ketobutyrate; Belongs to the zinc-containing alcohol dehydrogenase family.


ensembl_gene_id: BSONL12_10536
symbol: recA
gene_biotype: protein_coding
description:
  Recombinase A; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.


ensembl_gene_id: BSONL12_10541
symbol: cinA
gene_biotype: protein_coding
description:
  Competence damage-inducible protein A; COG1058 Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA; Belongs to the CinA family.


ensembl_gene_id: BSONL12_10546
symbol: PgsA
gene_biotype: protein_coding
description:
  CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; COG0558 Phosphatidylglycerophosphate synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: BSONL12_10591
symbol: EME74230.1
gene_biotype: protein_coding
description:
  COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins; Belongs to the FtsK/SpoIIIE/SftA family.


ensembl_gene_id: BSONL12_10606
symbol: rnj
gene_biotype: protein_coding
description:
  Ribonuclease J2; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay; Belongs to the metallo-beta-lactamase superfamily. RNA- metabolizing metallo-beta-lactamase-like family. Bacterial RNase J subfamily.


ensembl_gene_id: BSONL12_10611
symbol: dapA
gene_biotype: protein_coding
description:
  Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).


ensembl_gene_id: BSONL12_10621
symbol: asd
gene_biotype: protein_coding
description:
  Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.


ensembl_gene_id: BSONL12_10626
symbol: spoVFB
gene_biotype: protein_coding
description:
  Dipicolinate synthase subunit B; Together with DpaA, catalyzes the conversion of dihydrodipicolinate to dipicolinate (DPA).


ensembl_gene_id: BSONL12_10641
symbol: EME74240.1
gene_biotype: protein_coding
description:
  Peptidase-like protein MlpA; COG0612 Predicted Zn-dependent peptidases; Belongs to the peptidase M16 family.


ensembl_gene_id: BSONL12_10646
symbol: EME74241.1
gene_biotype: protein_coding
description:
  Carbohydrate esterase family 4 protein, polysaccharide deacetylase; COG0726 Predicted xylanase/chitin deacetylase.


ensembl_gene_id: BSONL12_10651
symbol: pnp
gene_biotype: protein_coding
description:
  Polynucleotide phosphorylase/polyadenylase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.


ensembl_gene_id: BSONL12_10656
symbol: rpsO
gene_biotype: protein_coding
description:
  30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.


ensembl_gene_id: BSONL12_10661
symbol: RibF
gene_biotype: protein_coding
description:
  Bifunctional riboflavin kinase/FMN adenylyltransferase; COG0196 FAD synthase; Belongs to the ribF family.


ensembl_gene_id: BSONL12_10666
symbol: truB
gene_biotype: protein_coding
description:
  tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.


ensembl_gene_id: BSONL12_10671
symbol: rbfA
gene_biotype: protein_coding
description:
  Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.


ensembl_gene_id: BSONL12_10681
symbol: infB
gene_biotype: protein_coding
description:
  Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.


ensembl_gene_id: BSONL12_10691
symbol: EME74250.1
gene_biotype: protein_coding
description:
  Hypothetical protein; COG2740 Predicted nucleic-acid-binding protein implicated in transcription termination.


ensembl_gene_id: BSONL12_10696
symbol: nusA
gene_biotype: protein_coding
description:
  Transcription elongation factor NusA; Participates in both transcription termination and antitermination.


ensembl_gene_id: BSONL12_10701
symbol: rimP
gene_biotype: protein_coding
description:
  Ribosome maturation protein RimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.


ensembl_gene_id: BSONL12_10706
symbol: EME74253.1
gene_biotype: protein_coding
description:
  Family 5 glycoside hydrolase CelD; COG3934 Endo-beta-mannanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.


ensembl_gene_id: BSONL12_10731
symbol: polC
gene_biotype: protein_coding
description:
  DNA polymerase III PolC; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: BSONL12_10736
symbol: proS
gene_biotype: protein_coding
description:
  prolyl-tRNA ligase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacyla [...]


ensembl_gene_id: BSONL12_10746
symbol: dxr
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose 5-phosphate reductoisomerase LspC; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family.


ensembl_gene_id: BSONL12_10756
symbol: UppS
gene_biotype: protein_coding
description:
  Undecaprenyl pyrophosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.


ensembl_gene_id: BSONL12_10761
symbol: frr
gene_biotype: protein_coding
description:
  Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.


ensembl_gene_id: BSONL12_10771
symbol: tsf
gene_biotype: protein_coding
description:
  Elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.


ensembl_gene_id: BSONL12_10786
symbol: EME74269.1
gene_biotype: protein_coding
description:
  RNA polymerase sigma factor SigD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: BSONL12_10791
symbol: cheD
gene_biotype: protein_coding
description:
  Chemoreceptor glutamine deamidase CheD; Deamidates glutamine residues to glutamate on methyl- accepting chemotaxis receptors (MCPs). CheD-mediated MCP deamidation is required for productive communication of the conformational signals of the chemoreceptors to the cheA kinase.


ensembl_gene_id: BSONL12_10806
symbol: CheA
gene_biotype: protein_coding
description:
  Two-component sensor histidine kinase CheA; COG0643 Chemotaxis protein histidine kinase and related kinases.


ensembl_gene_id: BSONL12_10811
symbol: cheB
gene_biotype: protein_coding
description:
  Chemotaxis-specific protein-glutamate methyltransferase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.


ensembl_gene_id: BSONL12_10826
symbol: flhA
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.


ensembl_gene_id: BSONL12_10831
symbol: flhB
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family.


ensembl_gene_id: BSONL12_10836
symbol: fliR
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family.


ensembl_gene_id: BSONL12_10841
symbol: fliQ
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.


ensembl_gene_id: BSONL12_10846
symbol: fliP
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.


ensembl_gene_id: BSONL12_10861
symbol: EME74284.1
gene_biotype: protein_coding
description:
  Flagellar motor switch protein; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.


ensembl_gene_id: BSONL12_10866
symbol: fliM
gene_biotype: protein_coding
description:
  Flagellar motor switch protein FliM; One of the proteins that forms a switch complex that is proposed to be located at the base of the basal body. This complex interacts with chemotaxis proteins (such as CheY) in addition to contacting components of the motor that determine the direction of flagellar rotation; Belongs to the FliM family.


ensembl_gene_id: BSONL12_10871
symbol: fliL
gene_biotype: protein_coding
description:
  Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.


ensembl_gene_id: BSONL12_10916
symbol: fliG
gene_biotype: protein_coding
description:
  Flagellar motor switch protein G; One of the proteins that forms a switch complex that is proposed to be located at the base of the basal body. This complex interacts with chemotaxis proteins (such as CheY) in addition to contacting components of the motor that determine the direction of flagellar rotation; Belongs to the FliG family.


ensembl_gene_id: BSONL12_10921
symbol: fliF
gene_biotype: protein_coding
description:
  Flagellar MS-ring protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family.


ensembl_gene_id: BSONL12_10936
symbol: flgB
gene_biotype: protein_coding
description:
  Flagellar basal body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.


ensembl_gene_id: BSONL12_10941
symbol: codY
gene_biotype: protein_coding
description:
  Transcriptional repressor CodY; DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor; Belongs to the CodY family.


ensembl_gene_id: BSONL12_10946
symbol: hslU
gene_biotype: protein_coding
description:
  ATP-dependent protease ATP-binding subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis.


ensembl_gene_id: BSONL12_10951
symbol: hslV
gene_biotype: protein_coding
description:
  ATP-dependent protease subunit HslV; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery.


ensembl_gene_id: BSONL12_10956
symbol: xerC
gene_biotype: protein_coding
description:
  Site-specific tyrosine recombinase XerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.


ensembl_gene_id: BSONL12_10961
symbol: trmFO
gene_biotype: protein_coding
description:
  tRNA (uracil-5-)-methyltransferase Gid; Catalyzes the folate-dependent formation of 5-methyl-uridine at position 54 (M-5-U54) in all tRNAs; Belongs to the MnmG family. TrmFO subfamily.


ensembl_gene_id: BSONL12_10966
symbol: topA
gene_biotype: protein_coding
description:
  DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]


ensembl_gene_id: BSONL12_10976
symbol: sucD
gene_biotype: protein_coding
description:
  succinyl-CoA synthetase subunit alpha; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.


ensembl_gene_id: BSONL12_10981
symbol: sucC
gene_biotype: protein_coding
description:
  succinyl-CoA synthetase subunit beta; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.


ensembl_gene_id: BSONL12_10986
symbol: EME74309.1
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein YlqH; COG2257 Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB.


ensembl_gene_id: BSONL12_11001
symbol: rbgA
gene_biotype: protein_coding
description:
  GTPase YlqF; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.


ensembl_gene_id: BSONL12_11006
symbol: rplS
gene_biotype: protein_coding
description:
  50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.


ensembl_gene_id: BSONL12_11011
symbol: trmD
gene_biotype: protein_coding
description:
  tRNA (guanine-N(1)-)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.


ensembl_gene_id: BSONL12_11016
symbol: rimM
gene_biotype: protein_coding
description:
  16S rRNA-processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.


ensembl_gene_id: BSONL12_11036
symbol: ffh
gene_biotype: protein_coding
description:
  Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily.


ensembl_gene_id: BSONL12_11041
symbol: EME74320.1
gene_biotype: protein_coding
description:
  DNA-binding protein; Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a regulatory protein.


ensembl_gene_id: BSONL12_11046
symbol: ftsY
gene_biotype: protein_coding
description:
  Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC).


ensembl_gene_id: BSONL12_11051
symbol: smc
gene_biotype: protein_coding
description:
  Chromosome condensation and segregation SMC ATPase; Required for chromosome condensation and partitioning. Belongs to the SMC family.


ensembl_gene_id: BSONL12_11056
symbol: rnc
gene_biotype: protein_coding
description:
  Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.


ensembl_gene_id: BSONL12_11066
symbol: EME74325.1
gene_biotype: protein_coding
description:
  3-oxoacyl-(acyl-carrier-protein) reductase FabG; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: BSONL12_11076
symbol: plsX
gene_biotype: protein_coding
description:
  Phosphate acyltransferase; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.


ensembl_gene_id: BSONL12_11081
symbol: fapR
gene_biotype: protein_coding
description:
  Fatty acid biosynthesis transcriptional regulator; Transcriptional factor involved in regulation of membrane lipid biosynthesis by repressing genes involved in fatty acid and phospholipid metabolism.


ensembl_gene_id: BSONL12_11086
symbol: recG
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.


ensembl_gene_id: BSONL12_11091
symbol: SdaA
gene_biotype: protein_coding
description:
  L-serine dehydratase subunit alpha SdaAA; COG1760 L-serine deaminase; Belongs to the iron-sulfur dependent L-serine dehydratase family.


ensembl_gene_id: BSONL12_11096
symbol: EME74331.1
gene_biotype: protein_coding
description:
  L-serine dehydratase subunit beta SdaAB; COG1760 L-serine deaminase; Belongs to the iron-sulfur dependent L-serine dehydratase family.


ensembl_gene_id: BSONL12_11146
symbol: rlmN
gene_biotype: protein_coding
description:
  Ribosomal RNA large subunit methyltransferase N; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family.


ensembl_gene_id: BSONL12_11151
symbol: RsmB
gene_biotype: protein_coding
description:
  16S rRNA methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.


ensembl_gene_id: BSONL12_11156
symbol: fmt
gene_biotype: protein_coding
description:
  methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.


ensembl_gene_id: BSONL12_11161
symbol: def-2
gene_biotype: protein_coding
description:
  Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.


ensembl_gene_id: BSONL12_11166
symbol: priA
gene_biotype: protein_coding
description:
  Primosome assembly protein PriA; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.


ensembl_gene_id: BSONL12_11171
symbol: EME74346.1
gene_biotype: protein_coding
description:
  Coenzyme A biosynthesis bifunctional protein CoaBC; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.


ensembl_gene_id: BSONL12_11176
symbol: rpoZ
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.


ensembl_gene_id: BSONL12_11201
symbol: EME74352.1
gene_biotype: protein_coding
description:
  Fibronectin-binding protein YloA; COG1293 Predicted RNA-binding protein homologous to eukaryotic snRNP.


ensembl_gene_id: BSONL12_11206
symbol: Met8
gene_biotype: protein_coding
description:
  Precorrin-2 dehydrogenase SirC; COG1648 Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain).


ensembl_gene_id: BSONL12_11216
symbol: CobA
gene_biotype: protein_coding
description:
  uroporphyrinogen-III C-methyltransferase CysG; COG0007 Uroporphyrinogen-III methylase; Belongs to the precorrin methyltransferase family.


ensembl_gene_id: BSONL12_11236
symbol: cysH-2
gene_biotype: protein_coding
description:
  (phospho)adenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.


ensembl_gene_id: BSONL12_11246
symbol: pyrE
gene_biotype: protein_coding
description:
  Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).


ensembl_gene_id: BSONL12_11251
symbol: pyrF
gene_biotype: protein_coding
description:
  Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily.


ensembl_gene_id: BSONL12_11261
symbol: pyrK
gene_biotype: protein_coding
description:
  Dihydroorotate dehydrogenase electron transfer subunit; Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD(+).


ensembl_gene_id: BSONL12_11276
symbol: pyrC
gene_biotype: protein_coding
description:
  Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.


ensembl_gene_id: BSONL12_11281
symbol: pyrB
gene_biotype: protein_coding
description:
  COG0540 Aspartate carbamoyltransferase, catalytic chain; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.


ensembl_gene_id: BSONL12_11291
symbol: pyrR
gene_biotype: protein_coding
description:
  Bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant; Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrR subfamily.


ensembl_gene_id: BSONL12_11296
symbol: RluD
gene_biotype: protein_coding
description:
  RNA-pseudouridine synthase YlyB; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: BSONL12_11301
symbol: lspA
gene_biotype: protein_coding
description:
  Lipoprotein signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.


ensembl_gene_id: BSONL12_11311
symbol: ileS
gene_biotype: protein_coding
description:
  isoleucyl-tRNA ligase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily.


ensembl_gene_id: BSONL12_11331
symbol: sepF
gene_biotype: protein_coding
description:
  Cell division protein SepF; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA.


ensembl_gene_id: BSONL12_11336
symbol: EME74379.1
gene_biotype: protein_coding
description:
  Amino acid racemase YlmE; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.


ensembl_gene_id: BSONL12_11361
symbol: EME74384.1
gene_biotype: protein_coding
description:
  ABC transporter ATP-binding protein YlmA; COG1119 ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA.


ensembl_gene_id: BSONL12_11366
symbol: EME74385.1
gene_biotype: protein_coding
description:
  Sporulation sigma factor SigG; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: BSONL12_11371
symbol: EME74386.1
gene_biotype: protein_coding
description:
  Sporulation sigma factor SigE; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: BSONL12_11376
symbol: EME74387.1
gene_biotype: protein_coding
description:
  sigma-E factor-processing peptidase SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR.


ensembl_gene_id: BSONL12_11391
symbol: ftsZ
gene_biotype: protein_coding
description:
  Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.


ensembl_gene_id: BSONL12_11396
symbol: ftsA
gene_biotype: protein_coding
description:
  Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.


ensembl_gene_id: BSONL12_11416
symbol: divIB
gene_biotype: protein_coding
description:
  Division initiation protein DivIB; Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex; Belongs to the FtsQ/DivIB family. DivIB subfamily.


ensembl_gene_id: BSONL12_11426
symbol: murG
gene_biotype: protein_coding
description:
  Undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.


ensembl_gene_id: BSONL12_11431
symbol: EME74398.1
gene_biotype: protein_coding
description:
  Factor for spore cortex peptidoglycan synthesis (stage V sporulation); COG0772 Bacterial cell division membrane protein; Belongs to the SEDS family.


ensembl_gene_id: BSONL12_11436
symbol: murD
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.


ensembl_gene_id: BSONL12_11441
symbol: mraY
gene_biotype: protein_coding
description:
  phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.


ensembl_gene_id: BSONL12_11446
symbol: murE
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily.


ensembl_gene_id: BSONL12_11466
symbol: rsmH
gene_biotype: protein_coding
description:
  16S rRNA m(4)C1402 methyltransferase; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.


ensembl_gene_id: BSONL12_11471
symbol: mraZ
gene_biotype: protein_coding
description:
  Cell division protein MraZ; COG2001 Uncharacterized protein conserved in bacteria; Belongs to the MraZ family.


ensembl_gene_id: BSONL12_11476
symbol: bshC
gene_biotype: protein_coding
description:
  Cysteine-adding enzyme BshC; Involved in bacillithiol (BSH) biosynthesis. May catalyze the last step of the pathway, the addition of cysteine to glucosamine malate (GlcN-Mal) to generate BSH.


ensembl_gene_id: BSONL12_11481
symbol: PanE
gene_biotype: protein_coding
description:
  2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.


ensembl_gene_id: BSONL12_11506
symbol: tmcAL
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of elongator tRNA(Met), using acetate and ATP as substrates. First activates an acetate ion to form acetyladenylate (Ac- AMP) and then transfers the acetyl group to tRNA to form ac(4)C34.


ensembl_gene_id: BSONL12_11521
symbol: coaD
gene_biotype: protein_coding
description:
  Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.


ensembl_gene_id: BSONL12_11556
symbol: EME74423.1
gene_biotype: protein_coding
description:
  Amidase; COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases.


ensembl_gene_id: BSONL12_11566
symbol: EME74425.1
gene_biotype: protein_coding
description:
  Transcriptional regulator, LysR family protein; COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: BSONL12_11601
symbol: CoxA
gene_biotype: protein_coding
description:
  Cytochrome c oxidase subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.


ensembl_gene_id: BSONL12_11606
symbol: CoxB
gene_biotype: protein_coding
description:
  Cytochrome caa3 oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).


ensembl_gene_id: BSONL12_11616
symbol: ctaA
gene_biotype: protein_coding
description:
  Heme A synthase CtaA; Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group; Belongs to the COX15/CtaA family. Type 1 subfamily.


ensembl_gene_id: BSONL12_11621
symbol: EME74436.1
gene_biotype: protein_coding
description:
  Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.


ensembl_gene_id: BSONL12_11626
symbol: EME74437.1
gene_biotype: protein_coding
description:
  Cell-division protein; COG0772 Bacterial cell division membrane protein; Belongs to the SEDS family.


ensembl_gene_id: BSONL12_11646
symbol: EME74441.1
gene_biotype: protein_coding
description:
  Hypothetical protein; COG1875 Predicted ATPase related to phosphate starvation-inducible protein PhoH.


ensembl_gene_id: BSONL12_11661
symbol: MhpA
gene_biotype: protein_coding
description:
  Hypothetical protein; COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases.


ensembl_gene_id: BSONL12_11676
symbol: EME74447.1
gene_biotype: protein_coding
description:
  GTP-binding protein elongation factor YlaG; COG1217 Predicted membrane GTPase involved in stress response.


ensembl_gene_id: BSONL12_11691
symbol: ImpA
gene_biotype: protein_coding
description:
  Inositol-1-monophosphatase YktC; COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family.


ensembl_gene_id: BSONL12_11741
symbol: EME74460.1
gene_biotype: protein_coding
description:
  COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit.


ensembl_gene_id: BSONL12_11746
symbol: pdhA
gene_biotype: protein_coding
description:
  Pyruvate dehydrogenase E1 component subunit alpha; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3).


ensembl_gene_id: BSONL12_11771
symbol: EME74466.1
gene_biotype: protein_coding
description:
  Hypothetical protein; COG5503 Uncharacterized conserved small protein; Belongs to the UPF0356 family.


ensembl_gene_id: BSONL12_11776
symbol: rnj-2
gene_biotype: protein_coding
description:
  Ribonuclease J1; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay; Belongs to the metallo-beta-lactamase superfamily. RNA- metabolizing metallo-beta-lactamase-like family. Bacterial RNase J subfamily.


ensembl_gene_id: BSONL12_11781
symbol: ade
gene_biotype: protein_coding
description:
  COG1001 Adenine deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family.


ensembl_gene_id: BSONL12_11786
symbol: EME74469.1
gene_biotype: protein_coding
description:
  Low affinity potassium transporter peripheric membrane component KtrC; COG0569 K+ transport systems, NAD-binding component.


ensembl_gene_id: BSONL12_11796
symbol: EME74471.1
gene_biotype: protein_coding
description:
  Transition state transcriptional regulator AbrB; COG2002 Regulators of stationary/sporulation gene expression.


ensembl_gene_id: BSONL12_11821
symbol: RbsA
gene_biotype: protein_coding
description:
  ABC transporter ATP-binding protein YkpA; COG0488 ATPase components of ABC transporters with duplicated ATPase domains.


ensembl_gene_id: BSONL12_11846
symbol: PfkB
gene_biotype: protein_coding
description:
  1-phosphofructokinase; COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB); Belongs to the carbohydrate kinase PfkB family.


ensembl_gene_id: BSONL12_11871
symbol: MacB
gene_biotype: protein_coding
description:
  ABC transporter ATP-binding protein; COG1136 ABC-type antimicrobial peptide transport system, ATPase component.


ensembl_gene_id: BSONL12_11876
symbol: EME74487.1
gene_biotype: protein_coding
description:
  Antimicrobial peptide ABC transporter permease YknX; COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: BSONL12_11886
symbol: EME74489.1
gene_biotype: protein_coding
description:
  ABC transporter ATP-binding protein YknV; COG1132 ABC-type multidrug transport system, ATPase and permease components.


ensembl_gene_id: BSONL12_11891
symbol: EME74490.1
gene_biotype: protein_coding
description:
  ABC transporter ATP-binding protein YknU; COG1132 ABC-type multidrug transport system, ATPase and permease components.


ensembl_gene_id: BSONL12_11916
symbol: MoeA
gene_biotype: protein_coding
description:
  Molybdopterin biosynthesis protein; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.


ensembl_gene_id: BSONL12_11921
symbol: ThiF
gene_biotype: protein_coding
description:
  Thiamine/molybdopterin biosynthesis MoeB-like protein; COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2.


ensembl_gene_id: BSONL12_11926
symbol: mobA
gene_biotype: protein_coding
description:
  Molybdopterin-guanine dinucleotide biosynthesis protein A; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor.


ensembl_gene_id: BSONL12_11956
symbol: EME74503.1
gene_biotype: protein_coding
description:
  N-acetyldiaminopimelate deacetylase YkuR; Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate.


ensembl_gene_id: BSONL12_11961
symbol: dapH
gene_biotype: protein_coding
description:
  2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase YkuQ; Catalyzes the transfer of an acetyl group from acetyl-CoA to tetrahydrodipicolinate.


ensembl_gene_id: BSONL12_12026
symbol: EME74515.1
gene_biotype: protein_coding
description:
  Short chain dehydrogenase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).


ensembl_gene_id: BSONL12_12091
symbol: MmsB
gene_biotype: protein_coding
description:
  6-phosphogluconate dehydrogenase YkwC; COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases.


ensembl_gene_id: BSONL12_12096
symbol: EME74529.1
gene_biotype: protein_coding
description:
  3-oxoacyl-(acyl-carrier-protein) reductase FabG; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).


ensembl_gene_id: BSONL12_12121
symbol: PtsI
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate-protein phosphotransferase; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr).


ensembl_gene_id: BSONL12_12171
symbol: EME74544.1
gene_biotype: protein_coding
description:
  Sporulation protein YkvU; COG2244 Membrane protein involved in the export of O-antigen and teichoic acid.


ensembl_gene_id: BSONL12_12231
symbol: queF
gene_biotype: protein_coding
description:
  7-cyano-7-deazaguanine reductase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1). Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily.


ensembl_gene_id: BSONL12_12286
symbol: queE-2
gene_biotype: protein_coding
description:
  7-carboxy-7-deazaguanine synthase QueE; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds.


ensembl_gene_id: BSONL12_12296
symbol: queC-2
gene_biotype: protein_coding
description:
  7-cyano-7-deazaguanine synthase; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)).


ensembl_gene_id: BSONL12_12306
symbol: EME74569.1
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease ATP-binding subunit ClpE; COG0542 ATPases with chaperone activity, ATP-binding subunit; Belongs to the ClpA/ClpB family.


ensembl_gene_id: BSONL12_12341
symbol: fosB
gene_biotype: protein_coding
description:
  Fosfomycin resistance protein FosB; Metallothiol transferase which confers resistance to fosfomycin by catalyzing the addition of a thiol cofactor to fosfomycin. L-cysteine is probably the physiological thiol donor. Belongs to the fosfomycin resistance protein family. FosB subfamily.


ensembl_gene_id: BSONL12_12346
symbol: mtnD
gene_biotype: protein_coding
description:
  Acireductone dioxygenase MtnD; Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway.


ensembl_gene_id: BSONL12_12351
symbol: mtnB
gene_biotype: protein_coding
description:
  Methylthioribulose-1-phosphate dehydratase; Catalyzes the dehydration of methylthioribulose-1-phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P).


ensembl_gene_id: BSONL12_12356
symbol: mtnX
gene_biotype: protein_coding
description:
  2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Dephosphorylates 2-hydroxy-3-keto-5-methylthiopentenyl-1- phosphate (HK-MTPenyl-1-P) yielding 1,2-dihydroxy-3-keto-5- methylthiopentene (DHK-MTPene).


ensembl_gene_id: BSONL12_12361
symbol: mtnW
gene_biotype: protein_coding
description:
  2,3-diketo-5-methylthiopentyl-1-phosphate enolase; Catalyzes the enolization of 2,3-diketo-5-methylthiopentyl-1- phosphate (DK-MTP-1-P) into 2-hydroxy-3-keto-5-methylthiopentenyl-1- phosphate (HK-MTPenyl-1-P); Belongs to the RuBisCO large chain family. Type IV subfamily.


ensembl_gene_id: BSONL12_12376
symbol: mtnK
gene_biotype: protein_coding
description:
  Methylthioribose kinase; Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate.


ensembl_gene_id: BSONL12_12381
symbol: mtnA
gene_biotype: protein_coding
description:
  Methylthioribose-1-phosphate isomerase; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P). Belongs to the EIF-2B alpha/beta/delta subunits family. MtnA subfamily.


ensembl_gene_id: BSONL12_12391
symbol: MgmT
gene_biotype: protein_coding
description:
  O6-methylguanine DNA alkyltransferase Ogt; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated.


ensembl_gene_id: BSONL12_12421
symbol: EME74592.1
gene_biotype: protein_coding
description:
  Low affinity potassium transporter integral membrane subunit KtrD; COG0168 Trk-type K+ transport systems, membrane components.


ensembl_gene_id: BSONL12_12426
symbol: htpX
gene_biotype: protein_coding
description:
  Heat shock protein HtpX; COG0501 Zn-dependent protease with chaperone function; Belongs to the peptidase M48B family.


ensembl_gene_id: BSONL12_12446
symbol: sigI
gene_biotype: protein_coding
description:
  RNA polymerase sigma factor SigI; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; Belongs to the sigma-70 factor family. SigI subfamily.


ensembl_gene_id: BSONL12_12471
symbol: ku
gene_biotype: protein_coding
description:
  Ku-type ATP-dependent DNA helicase YkoV; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.


ensembl_gene_id: BSONL12_12526
symbol: metE
gene_biotype: protein_coding
description:
  5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family.


ensembl_gene_id: BSONL12_12581
symbol: purU
gene_biotype: protein_coding
description:
  Formyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4).


ensembl_gene_id: BSONL12_12621
symbol: EME74632.1
gene_biotype: protein_coding
description:
  Dipeptide ABC transporter ATP-binding protein YkfD; COG4608 ABC-type oligopeptide transport system, ATPase component; Belongs to the ABC transporter superfamily.


ensembl_gene_id: BSONL12_12626
symbol: EME74633.1
gene_biotype: protein_coding
description:
  gamma-D-glutamyl-L-lysine endopeptidase YkfC; COG0791 Cell wall-associated hydrolases (invasion-associated proteins).


ensembl_gene_id: BSONL12_12631
symbol: EME74634.1
gene_biotype: protein_coding
description:
  L-Ala-D/L-Glu epimerase YkfB; COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily.


ensembl_gene_id: BSONL12_12636
symbol: EME74635.1
gene_biotype: protein_coding
description:
  Murein peptide carboxypeptidase YkfA; COG1619 Uncharacterized proteins, homologs of microcin C7 resistance protein MccF.


ensembl_gene_id: BSONL12_12641
symbol: EME74636.1
gene_biotype: protein_coding
description:
  Dipeptide ABC transporter substrate-binding protein DppE; COG4166 ABC-type oligopeptide transport system, periplasmic component.


ensembl_gene_id: BSONL12_12646
symbol: NrtC
gene_biotype: protein_coding
description:
  Dipeptide ABC transporter ATP-binding protein DppD; COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; Belongs to the ABC transporter superfamily.


ensembl_gene_id: BSONL12_12696
symbol: EME74647.1
gene_biotype: protein_coding
description:
  ABC transporter substrate-binding protein LplA; COG1653 ABC-type sugar transport system, periplasmic component.


ensembl_gene_id: BSONL12_12746
symbol: EME74657.1
gene_biotype: protein_coding
description:
  COG4225 Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins.


ensembl_gene_id: BSONL12_12761
symbol: EME74660.1
gene_biotype: protein_coding
description:
  Transport system substrate-binding protein YesO; COG1653 ABC-type sugar transport system, periplasmic component.


ensembl_gene_id: BSONL12_12771
symbol: YesM
gene_biotype: protein_coding
description:
  Two-component sensor histidine kinase YesM; COG2972 Predicted signal transduction protein with a C-terminal ATPase domain.


ensembl_gene_id: BSONL12_12786
symbol: cysA
gene_biotype: protein_coding
description:
  Sulfate ABC transporter ATP-binding protein CysA; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system.


ensembl_gene_id: BSONL12_12796
symbol: EME74665.1
gene_biotype: protein_coding
description:
  Sulfate ABC transporter permease; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import.


ensembl_gene_id: BSONL12_12801
symbol: EME74666.1
gene_biotype: protein_coding
description:
  Putative sulfate ABC transporter sulfate-binding protein; COG1613 ABC-type sulfate transport system, periplasmic component.


ensembl_gene_id: BSONL12_12836
symbol: EME74673.1
gene_biotype: protein_coding
description:
  L-galactonate oxidoreductase; COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases.


ensembl_gene_id: BSONL12_12841
symbol: EME74674.1
gene_biotype: protein_coding
description:
  D-mannonate oxidoreductase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: BSONL12_12851
symbol: RspB
gene_biotype: protein_coding
description:
  Galactitol-1-phosphate dehydrogenase YjmD; COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases.


ensembl_gene_id: BSONL12_12896
symbol: EME74685.1
gene_biotype: protein_coding
description:
  Positive control sigma-like factor; COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog.


ensembl_gene_id: BSONL12_12946
symbol: EME74695.1
gene_biotype: protein_coding
description:
  Phage N-acetylmuramoyl-L-alanine amidase; COG3409 Putative peptidoglycan-binding domain-containing protein.


ensembl_gene_id: BSONL12_13001
symbol: cysI
gene_biotype: protein_coding
description:
  Sulfite reductase subunit beta; Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L-cysteine from sulfate. Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.


ensembl_gene_id: BSONL12_13006
symbol: CysJ
gene_biotype: protein_coding
description:
  Sulfite reductase flavoprotein alpha-component CysJ; Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L-cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH -> FAD -> FMN to the hemoprotein component.


ensembl_gene_id: BSONL12_13026
symbol: EME74709.1
gene_biotype: protein_coding
description:
  Histidine triad (HIT) protein; COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases.


ensembl_gene_id: BSONL12_13061
symbol: EME74716.1
gene_biotype: protein_coding
description:
  S-adenosyl-L-methionine-dependent methyltransferase yktD; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity.


ensembl_gene_id: BSONL12_13096
symbol: YbaK
gene_biotype: protein_coding
description:
  YbaK/prolyl-tRNA synthetases associated domain-containing protein; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily.


ensembl_gene_id: BSONL12_13226
symbol: EME73930.1
gene_biotype: protein_coding
description:
  Lichenysin synthase LchAD; COG3208 Predicted thioesterase involved in non-ribosomal peptide biosynthesis.


ensembl_gene_id: BSONL12_13241
symbol: Lys5
gene_biotype: protein_coding
description:
  4'-phosphopantetheinyl transferase Sfp; COG2091 Phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily.


ensembl_gene_id: BSONL12_13281
symbol: DhdH
gene_biotype: protein_coding
description:
  Oxidoreductase family, NAD-binding Rossmann fold family protein; COG0673 Predicted dehydrogenases and related proteins.


ensembl_gene_id: BSONL12_13291
symbol: EME73943.1
gene_biotype: protein_coding
description:
  Pyridoxal phosphate-dependent decarboxylase; COG0076 Glutamate decarboxylase and related PLP-dependent proteins.


ensembl_gene_id: BSONL12_13301
symbol: EME73945.1
gene_biotype: protein_coding
description:
  Cystine ABC transporter ATP-binding protein; COG1126 ABC-type polar amino acid transport system, ATPase component.


ensembl_gene_id: BSONL12_13306
symbol: EME73946.1
gene_biotype: protein_coding
description:
  L-cystine ABC transporter permease TcyB; COG0765 ABC-type amino acid transport system, permease component.


ensembl_gene_id: BSONL12_13311
symbol: EME73947.1
gene_biotype: protein_coding
description:
  L-cystine ABC transporter substrate-binding protein TcyA; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: BSONL12_13316
symbol: EME73948.1
gene_biotype: protein_coding
description:
  Arginine utilization regulatory protein RocR; COG3829 Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains.


ensembl_gene_id: BSONL12_13321
symbol: rocD
gene_biotype: protein_coding
description:
  Ornithine--oxo-acid transaminase; Catalyzes the interconversion of ornithine to glutamate semialdehyde.


ensembl_gene_id: BSONL12_13331
symbol: EME73951.1
gene_biotype: protein_coding
description:
  COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family; Belongs to the arginase family.


ensembl_gene_id: BSONL12_13346
symbol: EME73954.1
gene_biotype: protein_coding
description:
  spermine/spermidine-N-acetyltransferase PaiA; COG0454 Histone acetyltransferase HPA2 and related acetyltransferases.


ensembl_gene_id: BSONL12_13361
symbol: UbiX
gene_biotype: protein_coding
description:
  Aromatic acid decarboxylase; Involved in the non-oxidative decarboxylation and detoxification of phenolic derivatives. Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for phenolic acid decarboxylase.


ensembl_gene_id: BSONL12_13366
symbol: UbiD
gene_biotype: protein_coding
description:
  Phenolic acid decarboxylase subunit gamma BsdC; Involved in the non-oxidative decarboxylation and detoxification of phenolic derivatives.


ensembl_gene_id: BSONL12_13411
symbol: EME73967.1
gene_biotype: protein_coding
description:
  ABC transporter substrate-binding protein; COG1879 ABC-type sugar transport system, periplasmic component.


ensembl_gene_id: BSONL12_13426
symbol: EME73970.1
gene_biotype: protein_coding
description:
  ABC transporter substrate-binding protein; COG4213 ABC-type xylose transport system, periplasmic component.


ensembl_gene_id: BSONL12_13436
symbol: EME73972.1
gene_biotype: protein_coding
description:
  ABC transporter permease; COG4214 ABC-type xylose transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: BSONL12_13501
symbol: EME73983.1
gene_biotype: protein_coding
description:
  ABC transporter ATP-binding protein YclH; COG1136 ABC-type antimicrobial peptide transport system, ATPase component.


ensembl_gene_id: BSONL12_13506
symbol: EME73984.1
gene_biotype: protein_coding
description:
  ABC transporter permease YclI; COG0577 ABC-type antimicrobial peptide transport system, permease component.


ensembl_gene_id: BSONL12_13531
symbol: EME73989.1
gene_biotype: protein_coding
description:
  COG4606 ABC-type enterochelin transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: BSONL12_13536
symbol: EME73990.1
gene_biotype: protein_coding
description:
  Petrobactin ABC transporter permease protein YclO; COG4605 ABC-type enterochelin transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: BSONL12_13541
symbol: EME73991.1
gene_biotype: protein_coding
description:
  Petrobactin ABC transporter ATP-binding protein YclP; COG4604 ABC-type enterochelin transport system, ATPase component.


ensembl_gene_id: BSONL12_13546
symbol: EME73992.1
gene_biotype: protein_coding
description:
  Petrobactin ABC transporter substrate-binding protein YclQ; COG4607 ABC-type enterochelin transport system, periplasmic component.


ensembl_gene_id: BSONL12_13566
symbol: EME73996.1
gene_biotype: protein_coding
description:
  NAD(P)H-dependent nitro/flavin reductase NfrA; COG0778 Nitroreductase; Belongs to the flavin oxidoreductase frp family.


ensembl_gene_id: BSONL12_13611
symbol: EME74005.1
gene_biotype: protein_coding
description:
  Copper transport protein YcnJ; COG2372 Uncharacterized protein, homolog of Cu resistance protein CopC.


ensembl_gene_id: BSONL12_13631
symbol: NasA
gene_biotype: protein_coding
description:
  Assimilatory nitrate reductase catalytic subunit NasC; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: BSONL12_13636
symbol: NirB
gene_biotype: protein_coding
description:
  COG1251 NAD(P)H-nitrite reductase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.


ensembl_gene_id: BSONL12_13671
symbol: EME74017.1
gene_biotype: protein_coding
description:
  (3R)-hydroxymyristoyl-ACP dehydratase; COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases.


ensembl_gene_id: BSONL12_13701
symbol: EME74023.1
gene_biotype: protein_coding
description:
  PTS system ascorbate-specific transporter subunit IIC; COG3037 Uncharacterized protein conserved in bacteria.


ensembl_gene_id: BSONL12_13711
symbol: pxpA
gene_biotype: protein_coding
description:
  LamB/YcsF family protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.


ensembl_gene_id: BSONL12_13751
symbol: MtlA
gene_biotype: protein_coding
description:
  PTS system mannitol-specific transporter subunit IIA; COG4668 Mannitol/fructose-specific phosphotransferase system, IIA domain.


ensembl_gene_id: BSONL12_13786
symbol: amj
gene_biotype: protein_coding
description:
  Transmembrane protein YdaH; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.


ensembl_gene_id: BSONL12_13811
symbol: topB
gene_biotype: protein_coding
description:
  DNA topoisomerase III; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA su [...]


ensembl_gene_id: BSONL12_13831
symbol: PoxL
gene_biotype: protein_coding
description:
  Pyruvate oxidase; COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]; Belongs to the TPP enzyme family.


ensembl_gene_id: BSONL12_13841
symbol: EME74051.1
gene_biotype: protein_coding
description:
  COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).


ensembl_gene_id: BSONL12_13856
symbol: mntH
gene_biotype: protein_coding
description:
  Manganese transport protein MntH; H(+)-stimulated, divalent metal cation uptake system. Belongs to the NRAMP family.


ensembl_gene_id: BSONL12_13871
symbol: EME74057.1
gene_biotype: protein_coding
description:
  UDP-glucosyltransferase YojK; COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase.


ensembl_gene_id: BSONL12_13916
symbol: EME74066.1
gene_biotype: protein_coding
description:
  ABC transporter ATP-binding protein YdbJ; COG1131 ABC-type multidrug transport system, ATPase component.


ensembl_gene_id: BSONL12_13921
symbol: EME74067.1
gene_biotype: protein_coding
description:
  ABC transporter permease YdbK; COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component.


ensembl_gene_id: BSONL12_13951
symbol: ddl
gene_biotype: protein_coding
description:
  D-alanyl-alanine synthetase A; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.


ensembl_gene_id: BSONL12_13956
symbol: murF
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.


ensembl_gene_id: BSONL12_13966
symbol: cshA
gene_biotype: protein_coding
description:
  DEAD/DEAH box helicase; DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA-dependent ATPase activity; Belongs to the DEAD box helicase family. CshA subfamily.


ensembl_gene_id: BSONL12_13981
symbol: EME74079.1
gene_biotype: protein_coding
description:
  Transmembrane protein YdcA; COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid).


ensembl_gene_id: BSONL12_13991
symbol: alr
gene_biotype: protein_coding
description:
  Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.


ensembl_gene_id: BSONL12_13996
symbol: EME74082.1
gene_biotype: protein_coding
description:
  Antitoxin NdoAI; COG0864 Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain.


ensembl_gene_id: BSONL12_14016
symbol: RsbT
gene_biotype: protein_coding
description:
  Serine/threonine-protein kinase RsbT; COG2172 Anti-sigma regulatory factor (Ser/Thr protein kinase).


ensembl_gene_id: BSONL12_14031
symbol: rsbW
gene_biotype: protein_coding
description:
  Serine-protein kinase RsbW; Negative regulator of sigma-B activity. Phosphorylates and inactivates its specific antagonist protein, RsbV. Upon phosphorylation of RsbV, RsbW is released and binds to sigma-B, thereby blocking its ability to form an RNA polymerase holoenzyme (E-sigma-B).


ensembl_gene_id: BSONL12_14036
symbol: EME74090.1
gene_biotype: protein_coding
description:
  COG1191 DNA-directed RNA polymerase specialized sigma subunit; Belongs to the sigma-70 factor family.


ensembl_gene_id: BSONL12_14106
symbol: EME74104.1
gene_biotype: protein_coding
description:
  Hypothetical protein YdeF; COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs.


ensembl_gene_id: BSONL12_14271
symbol: EME74137.1
gene_biotype: protein_coding
description:
  Short-chain type dehydrogenase/reductase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).


ensembl_gene_id: BSONL12_14301
symbol: EME74143.1
gene_biotype: protein_coding
description:
  Mutt/nudix family protein; COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; Belongs to the Nudix hydrolase family.


ensembl_gene_id: BSONL12_14316
symbol: EME74146.1
gene_biotype: protein_coding
description:
  Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; COG2972 Predicted signal transduction protein with a C-terminal ATPase domain.


ensembl_gene_id: BSONL12_14331
symbol: EME74149.1
gene_biotype: protein_coding
description:
  Sugar/inositol transporter; COG0477 Permeases of the major facilitator superfamily; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.


ensembl_gene_id: BSONL12_14369
symbol: tgl
gene_biotype: protein_coding
description:
  Transglutaminase; Probably plays a role in the assembly of the spore coat proteins by catalyzing epsilon-(gamma-glutamyl)lysine cross-links. Belongs to the bacillus TGase family.


ensembl_gene_id: BSONL12_14409
symbol: EME72938.1
gene_biotype: protein_coding
description:
  Cation channel protein YugO; COG1226 Kef-type K+ transport systems, predicted NAD-binding component.


ensembl_gene_id: BSONL12_14439
symbol: EME72944.1
gene_biotype: protein_coding
description:
  General stress protein 13; COG1098 Predicted RNA binding protein (contains ribosomal protein S1 domain).


ensembl_gene_id: BSONL12_14454
symbol: DhaA
gene_biotype: protein_coding
description:
  Alpha/beta hydrolase YugF; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).


ensembl_gene_id: BSONL12_14469
symbol: PatB
gene_biotype: protein_coding
description:
  Cystathionine beta-lyase PatB; COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities.


ensembl_gene_id: BSONL12_14519
symbol: EME72960.1
gene_biotype: protein_coding
description:
  Lipoprotein; COG1744 Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein.


ensembl_gene_id: BSONL12_14524
symbol: EME72961.1
gene_biotype: protein_coding
description:
  Simple sugar transport system ATP-binding protein; COG3845 ABC-type uncharacterized transport systems, ATPase components.


ensembl_gene_id: BSONL12_14529
symbol: EME72962.1
gene_biotype: protein_coding
description:
  Sugar ABC transporter; COG4603 ABC-type uncharacterized transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: BSONL12_14534
symbol: EME72963.1
gene_biotype: protein_coding
description:
  ABC transporter ATP-binding protein; COG1079 Uncharacterized ABC-type transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: BSONL12_14539
symbol: Cho1
gene_biotype: protein_coding
description:
  CDP-diacylglycerol--serine O-phosphatidyltransferase; COG1183 Phosphatidylserine synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: BSONL12_14549
symbol: PisD
gene_biotype: protein_coding
description:
  Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).


ensembl_gene_id: BSONL12_14564
symbol: EME72969.1
gene_biotype: protein_coding
description:
  Monovalent cation/H+ antiporter subunit A; COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit.


ensembl_gene_id: BSONL12_14619
symbol: EME72980.1
gene_biotype: protein_coding
description:
  Terpenoid synthase ComQ; COG0142 Geranylgeranyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family.


ensembl_gene_id: BSONL12_14634
symbol: EME72983.1
gene_biotype: protein_coding
description:
  Metal-dependent hydrolase YuxH; COG3434 Predicted signal transduction protein containing EAL and modified HD-GYP domains.


ensembl_gene_id: BSONL12_14639
symbol: PncB
gene_biotype: protein_coding
description:
  Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family.


ensembl_gene_id: BSONL12_14679
symbol: EME72992.1
gene_biotype: protein_coding
description:
  Hypothetical protein; COG1075 Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold.


ensembl_gene_id: BSONL12_14689
symbol: EME72994.1
gene_biotype: protein_coding
description:
  MutT/Nudix family protein; COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes.


ensembl_gene_id: BSONL12_14764
symbol: pepA
gene_biotype: protein_coding
description:
  Multifunctional aminopeptidase A; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.


ensembl_gene_id: BSONL12_14814
symbol: dapF
gene_biotype: protein_coding
description:
  Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.


ensembl_gene_id: BSONL12_14819
symbol: EME73020.1
gene_biotype: protein_coding
description:
  Nucleoside transporter YutK; COG1972 Nucleoside permease; Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family.


ensembl_gene_id: BSONL12_14879
symbol: thrB
gene_biotype: protein_coding
description:
  Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily.


ensembl_gene_id: BSONL12_14884
symbol: ThrC
gene_biotype: protein_coding
description:
  Threonine synthase; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine.


ensembl_gene_id: BSONL12_14894
symbol: GyaR
gene_biotype: protein_coding
description:
  COG1052 Lactate dehydrogenase and related dehydrogenases; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: BSONL12_14909
symbol: EME73036.1
gene_biotype: protein_coding
description:
  HAD superfamily hydrolase YutF; Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro; Belongs to the HAD-like hydrolase superfamily. NagD family.


ensembl_gene_id: BSONL12_14929
symbol: lipA
gene_biotype: protein_coding
description:
  Lipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.


ensembl_gene_id: BSONL12_14959
symbol: EME73046.1
gene_biotype: protein_coding
description:
  Phosphoesterase YunD; COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases; Belongs to the 5'-nucleotidase family.


ensembl_gene_id: BSONL12_15009
symbol: PucG
gene_biotype: protein_coding
description:
  (S)-ureidoglycine-glyoxylate aminotransferase PucG; COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase.


ensembl_gene_id: BSONL12_15044
symbol: EME73061.1
gene_biotype: protein_coding
description:
  Multiple sugar ABC transporter ATP-binding protein; COG3839 ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily.


ensembl_gene_id: BSONL12_15064
symbol: EME73065.1
gene_biotype: protein_coding
description:
  Sugar ABC transporter inner membrane protein; COG1175 ABC-type sugar transport systems, permease components.


ensembl_gene_id: BSONL12_15069
symbol: EME73066.1
gene_biotype: protein_coding
description:
  Fructose amino acid-binding lipoprotein; COG1653 ABC-type sugar transport system, periplasmic component.


ensembl_gene_id: BSONL12_15074
symbol: FrlB
gene_biotype: protein_coding
description:
  fructoselysine-6-P-deglycase; Catalyzes the conversion of a range of fructosamine 6- phosphates to glucose 6-phosphate and a free amino acid.


ensembl_gene_id: BSONL12_15084
symbol: EME73069.1
gene_biotype: protein_coding
description:
  Small multidrug resistance protein; COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily.


ensembl_gene_id: BSONL12_15114
symbol: EME73075.1
gene_biotype: protein_coding
description:
  Deacylase; COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases.


ensembl_gene_id: BSONL12_15139
symbol: EME73080.1
gene_biotype: protein_coding
description:
  FeS cluster assembly protein SufB; COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component.


ensembl_gene_id: BSONL12_15149
symbol: SufS
gene_biotype: protein_coding
description:
  Cysteine desulfurase SufS; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.


ensembl_gene_id: BSONL12_15154
symbol: EME73083.1
gene_biotype: protein_coding
description:
  FeS cluster assembly protein SufD; COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component.


ensembl_gene_id: BSONL12_15159
symbol: EME73084.1
gene_biotype: protein_coding
description:
  ABC transporter ATP-binding protein SufC; COG0396 ABC-type transport system involved in Fe-S cluster assembly, ATPase component.


ensembl_gene_id: BSONL12_15174
symbol: PcaC
gene_biotype: protein_coding
description:
  Hypothetical protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.


ensembl_gene_id: BSONL12_15179
symbol: EME73088.1
gene_biotype: protein_coding
description:
  Methionine ABC transporter substrate-binding protein MetQ; COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen; Belongs to the nlpA lipoprotein family.


ensembl_gene_id: BSONL12_15184
symbol: EME73089.1
gene_biotype: protein_coding
description:
  Methionine ABC transporter permease MetP; COG2011 ABC-type metal ion transport system, permease component.


ensembl_gene_id: BSONL12_15189
symbol: metN-2
gene_biotype: protein_coding
description:
  Methionine ABC transporter ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.


ensembl_gene_id: BSONL12_15214
symbol: gcvH
gene_biotype: protein_coding
description:
  Glycine cleavage system protein H; Is also involved in protein lipoylation via its role as an octanoyl/lipoyl carrier protein intermediate; Belongs to the GcvH family.


ensembl_gene_id: BSONL12_15219
symbol: EME73096.1
gene_biotype: protein_coding
description:
  Transcriptional regulator YusI; COG1393 Arsenate reductase and related proteins, glutaredoxin family; Belongs to the ArsC family.


ensembl_gene_id: BSONL12_15264
symbol: EME73105.1
gene_biotype: protein_coding
description:
  Siderophore ABC transporter ATP-binding protein YusV; COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components.


ensembl_gene_id: BSONL12_15279
symbol: EME73108.1
gene_biotype: protein_coding
description:
  Siderophore ABC transporter substrate-binding protein YfiY; COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component.


ensembl_gene_id: BSONL12_15309
symbol: EME73112.1
gene_biotype: protein_coding
description:
  Metalloregulation DNA-binding stress protein MrgA; COG0783 DNA-binding ferritin-like protein (oxidative damage protectant); Belongs to the Dps family.


ensembl_gene_id: BSONL12_15339
symbol: fumC
gene_biotype: protein_coding
description:
  Fumarate hydratase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.


ensembl_gene_id: BSONL12_15409
symbol: EME73132.1
gene_biotype: protein_coding
description:
  Vitamin B12 transport system, ATPase; COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components.


ensembl_gene_id: BSONL12_15414
symbol: EME73133.1
gene_biotype: protein_coding
description:
  ABC transporter permease YvrB; COG0609 ABC-type Fe3+-siderophore transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: BSONL12_15419
symbol: EME73134.1
gene_biotype: protein_coding
description:
  ABC transporter substrate-binding protein YvrC; COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component.


ensembl_gene_id: BSONL12_15424
symbol: EME73135.1
gene_biotype: protein_coding
description:
  Short chain dehydrogenase YvrD; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: BSONL12_15484
symbol: EME73145.1
gene_biotype: protein_coding
description:
  Hydroxamate siderophore ABC transporter ATP-binding protein FhuC; COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components.


ensembl_gene_id: BSONL12_15514
symbol: EME73151.1
gene_biotype: protein_coding
description:
  Sulfatase; COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily; Belongs to the LTA synthase family.


ensembl_gene_id: BSONL12_15534
symbol: EME73155.1
gene_biotype: protein_coding
description:
  Na+/H+ antiporter; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family.


ensembl_gene_id: BSONL12_15574
symbol: EME73161.1
gene_biotype: protein_coding
description:
  Putative Crp/Fnr family transcriptional regulator; COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases.


ensembl_gene_id: BSONL12_15599
symbol: bdbC
gene_biotype: protein_coding
description:
  Disulfide bond formation protein DsbB family protein; Required for disulfide bond formation in some proteins. Belongs to the DsbB family. BdbC subfamily.


ensembl_gene_id: BSONL12_15614
symbol: EME73165.1
gene_biotype: protein_coding
description:
  Aminosugar ABC transporter substrate-binding protein; COG1653 ABC-type sugar transport system, periplasmic component.


ensembl_gene_id: BSONL12_15619
symbol: EME73166.1
gene_biotype: protein_coding
description:
  Aminosugar ABC transporter permease FrlN; COG1175 ABC-type sugar transport systems, permease components.


ensembl_gene_id: BSONL12_15624
symbol: EME73167.1
gene_biotype: protein_coding
description:
  Aminosugar ABC transporter permease FrlM; COG0395 ABC-type sugar transport system, permease component.


ensembl_gene_id: BSONL12_15629
symbol: YicI
gene_biotype: protein_coding
description:
  COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases; Belongs to the glycosyl hydrolase 31 family.


ensembl_gene_id: BSONL12_15639
symbol: EME73170.1
gene_biotype: protein_coding
description:
  Manganese ABC transporter ATP-binding protein MntB; COG1121 ABC-type Mn/Zn transport systems, ATPase component.


ensembl_gene_id: BSONL12_15644
symbol: EME73171.1
gene_biotype: protein_coding
description:
  Manganese ABC transporter permease MntC; COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components.


ensembl_gene_id: BSONL12_15649
symbol: EME73172.1
gene_biotype: protein_coding
description:
  Manganese ABC transporter substrate-binding protein MntA; COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin; Belongs to the bacterial solute-binding protein 9 family.


ensembl_gene_id: BSONL12_15784
symbol: EME73199.1
gene_biotype: protein_coding
description:
  Oxalate decarboxylase OxdC; COG2140 Thermophilic glucose-6-phosphate isomerase and related metalloenzymes.


ensembl_gene_id: BSONL12_15809
symbol: smpB
gene_biotype: protein_coding
description:
  SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...]


ensembl_gene_id: BSONL12_15814
symbol: rnr
gene_biotype: protein_coding
description:
  Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.


ensembl_gene_id: BSONL12_15824
symbol: secG
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.


ensembl_gene_id: BSONL12_15849
symbol: EME73212.1
gene_biotype: protein_coding
description:
  Osmoprotectant ABC transporter permease OpuCD; COG1174 ABC-type proline/glycine betaine transport systems, permease component.


ensembl_gene_id: BSONL12_15859
symbol: EME73214.1
gene_biotype: protein_coding
description:
  Osmoprotectant ABC transporter permease OpuCB; COG1174 ABC-type proline/glycine betaine transport systems, permease component.


ensembl_gene_id: BSONL12_15864
symbol: EME73215.1
gene_biotype: protein_coding
description:
  Osmoprotectant ABC transporter ATP-binding protein OpuCA; COG1125 ABC-type proline/glycine betaine transport systems, ATPase components.


ensembl_gene_id: BSONL12_15889
symbol: EME73220.1
gene_biotype: protein_coding
description:
  Periplasmic binding protein, iron transporter; COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component.


ensembl_gene_id: BSONL12_15894
symbol: eno
gene_biotype: protein_coding
description:
  Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.


ensembl_gene_id: BSONL12_15899
symbol: gpmI
gene_biotype: protein_coding
description:
  Phosphoglyceromutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the BPG-independent phosphoglycerate mutase family.


ensembl_gene_id: BSONL12_15904
symbol: tpiA
gene_biotype: protein_coding
description:
  Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.


ensembl_gene_id: BSONL12_15934
symbol: EME73229.1
gene_biotype: protein_coding
description:
  Luciferase family oxidoreductase YvbT; COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases.


ensembl_gene_id: BSONL12_15979
symbol: lutC
gene_biotype: protein_coding
description:
  Lactate utilization protein LutC; Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source.


ensembl_gene_id: BSONL12_15984
symbol: lutB
gene_biotype: protein_coding
description:
  YkgG family protein; Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source. Has probably a role as an electron transporter during oxidation of L-lactate.


ensembl_gene_id: BSONL12_15989
symbol: lutA
gene_biotype: protein_coding
description:
  Lactate utilization protein LutA; Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source.


ensembl_gene_id: BSONL12_15999
symbol: EME73242.1
gene_biotype: protein_coding
description:
  L-lactate permease LutP; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.


ensembl_gene_id: BSONL12_16004
symbol: EME73243.1
gene_biotype: protein_coding
description:
  RNA polymerase sigma-54 factor (sigma-L); COG1508 DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog.


ensembl_gene_id: BSONL12_16019
symbol: EpsN
gene_biotype: protein_coding
description:
  COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; Belongs to the DegT/DnrJ/EryC1 family.


ensembl_gene_id: BSONL12_16034
symbol: EME73249.1
gene_biotype: protein_coding
description:
  Transmembrane protein EpsK; COG2244 Membrane protein involved in the export of O-antigen and teichoic acid.


ensembl_gene_id: BSONL12_16074
symbol: EME73257.1
gene_biotype: protein_coding
description:
  Polysaccharide biosynthesis protein EpsC; COG1086 Predicted nucleoside-diphosphate sugar epimerases.


ensembl_gene_id: BSONL12_16094
symbol: EME73261.1
gene_biotype: protein_coding
description:
  NAD(P)H oxidoreductase YwrO; COG2249 Putative NADPH-quinone reductase (modulator of drug activity B).


ensembl_gene_id: BSONL12_16114
symbol: LevB
gene_biotype: protein_coding
description:
  Levanbiose-producing levanase LevB; COG1621 Beta-fructosidases (levanase/invertase); Belongs to the glycosyl hydrolase 32 family.


ensembl_gene_id: BSONL12_16139
symbol: clpP
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: BSONL12_16149
symbol: EME73272.1
gene_biotype: protein_coding
description:
  Hypothetical protein; COG1611 Predicted Rossmann fold nucleotide-binding protein; Belongs to the LOG family.


ensembl_gene_id: BSONL12_16174
symbol: EME73277.1
gene_biotype: protein_coding
description:
  2-hydroxyacid dehydrogenase YvcT; COG1052 Lactate dehydrogenase and related dehydrogenases; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: BSONL12_16179
symbol: EME73278.1
gene_biotype: protein_coding
description:
  FMN-binding protein YdfE; COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family.


ensembl_gene_id: BSONL12_16189
symbol: EME73280.1
gene_biotype: protein_coding
description:
  ABC transporter permease; COG0577 ABC-type antimicrobial peptide transport system, permease component.


ensembl_gene_id: BSONL12_16194
symbol: EME73281.1
gene_biotype: protein_coding
description:
  Bacitracin export ATP-binding protein BceA; COG1136 ABC-type antimicrobial peptide transport system, ATPase component.


ensembl_gene_id: BSONL12_16224
symbol: EME73287.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family.


ensembl_gene_id: BSONL12_16234
symbol: MutT
gene_biotype: protein_coding
description:
  NUDIX hydrolase domain-containing protein YvcI; COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; Belongs to the Nudix hydrolase family.


ensembl_gene_id: BSONL12_16249
symbol: hisI
gene_biotype: protein_coding
description:
  Bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein; COG0139 Phosphoribosyl-AMP cyclohydrolase; In the N-terminal section; belongs to the PRA-CH family.


ensembl_gene_id: BSONL12_16254
symbol: hisF
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase subunit HisF; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.


ensembl_gene_id: BSONL12_16259
symbol: hisA
gene_biotype: protein_coding
description:
  1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; COG0106 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase.


ensembl_gene_id: BSONL12_16264
symbol: hisH
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase subunit HisH; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.


ensembl_gene_id: BSONL12_16274
symbol: hisD
gene_biotype: protein_coding
description:
  Bifunctional histidinal dehydrogenase/ histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.


ensembl_gene_id: BSONL12_16279
symbol: hisG
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase catalytic subunit; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Short subfamily.


ensembl_gene_id: BSONL12_16284
symbol: hisZ
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase regulatory subunit; Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine.


ensembl_gene_id: BSONL12_16309
symbol: ppaX
gene_biotype: protein_coding
description:
  Pyrophosphatase PpaX; Hydrolyzes pyrophosphate formed during P-Ser-HPr dephosphorylation by HPrK/P. Might play a role in controlling the intracellular pyrophosphate pool.


ensembl_gene_id: BSONL12_16319
symbol: lgt
gene_biotype: protein_coding
description:
  Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.


ensembl_gene_id: BSONL12_16324
symbol: hprK
gene_biotype: protein_coding
description:
  HPr kinase/phosphorylase; Catalyzes the ATP- as well as the pyrophosphate-dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK/P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P-Ser-HPr). The two antagonistic activities of HprK/P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon [...]


ensembl_gene_id: BSONL12_16374
symbol: uvrA
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.


ensembl_gene_id: BSONL12_16379
symbol: uvrB
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate  [...]


ensembl_gene_id: BSONL12_16394
symbol: EME73321.1
gene_biotype: protein_coding
description:
  Cell division topological determinant SwrA; COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain.


ensembl_gene_id: BSONL12_16404
symbol: CtpA
gene_biotype: protein_coding
description:
  Carboxy-terminal processing protease CtpB; COG0793 Periplasmic protease; Belongs to the peptidase S41A family.


ensembl_gene_id: BSONL12_16419
symbol: EME73326.1
gene_biotype: protein_coding
description:
  Cell-division ABC transporter; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.


ensembl_gene_id: BSONL12_16424
symbol: ftsE
gene_biotype: protein_coding
description:
  ABC transporter ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.


ensembl_gene_id: BSONL12_16439
symbol: prfB
gene_biotype: protein_coding
description:
  Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.


ensembl_gene_id: BSONL12_16444
symbol: secA
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family.


ensembl_gene_id: BSONL12_16449
symbol: hpf
gene_biotype: protein_coding
description:
  Hypothetical protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.


ensembl_gene_id: BSONL12_16469
symbol: fliD
gene_biotype: protein_coding
description:
  Flagellar capping protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.


ensembl_gene_id: BSONL12_16494
symbol: csrA
gene_biotype: protein_coding
description:
  Carbon storage regulator; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW.


ensembl_gene_id: BSONL12_16499
symbol: fliW
gene_biotype: protein_coding
description:
  Flagellar assembly protein FliW; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum.


ensembl_gene_id: BSONL12_16529
symbol: EME73348.1
gene_biotype: protein_coding
description:
  Flagellar operon protein YvyF; COG1594 DNA-directed RNA polymerase, subunit M/Transcription elongation factor TFIIS.


ensembl_gene_id: BSONL12_16544
symbol: EME73351.1
gene_biotype: protein_coding
description:
  Late competence protein ComFA; COG4098 Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein).


ensembl_gene_id: BSONL12_16559
symbol: DegS
gene_biotype: protein_coding
description:
  Two-component sensor histidine kinase DegS; Member of the two-component regulatory system DegS/DegU, which plays an important role in the transition growth phase.


ensembl_gene_id: BSONL12_16574
symbol: WecA
gene_biotype: protein_coding
description:
  Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase TagO; COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase.


ensembl_gene_id: BSONL12_16614
symbol: EME73365.1
gene_biotype: protein_coding
description:
  Colanic acid exporter; COG2244 Membrane protein involved in the export of O-antigen and teichoic acid.


ensembl_gene_id: BSONL12_16619
symbol: EME73366.1
gene_biotype: protein_coding
description:
  Undecaprenyl-phosphate N-acetylgalactosaminyl 1-phosphate transferase TuaA; COG2148 Sugar transferases involved in lipopolysaccharide synthesis.


ensembl_gene_id: BSONL12_16639
symbol: tagU
gene_biotype: protein_coding
description:
  Membrane-bound transcriptional regulator LytR; May catalyze the final step in cell wall teichoic acid biosynthesis, the transfer of the anionic cell wall polymers (APs) from their lipid-linked precursor to the cell wall peptidoglycan (PG).


ensembl_gene_id: BSONL12_16649
symbol: TarL
gene_biotype: protein_coding
description:
  COG1887 Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC.


ensembl_gene_id: BSONL12_16654
symbol: TagA
gene_biotype: protein_coding
description:
  UDP-N-acetyl-D-mannosamine transferase TagA; Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid.


ensembl_gene_id: BSONL12_16664
symbol: EME73375.1
gene_biotype: protein_coding
description:
  Minor teichoic acid biosynthesis protein ggaA like protein; COG0463 Glycosyltransferases involved in cell wall biogenesis.


ensembl_gene_id: BSONL12_16674
symbol: EME73377.1
gene_biotype: protein_coding
description:
  Teichoic acid transport system permease; COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component.


ensembl_gene_id: BSONL12_16679
symbol: tagH
gene_biotype: protein_coding
description:
  ATP-binding teichoic acid transporter component; Part of the ABC transporter complex TagGH involved in teichoic acids export. Responsible for energy coupling to the transport system.


ensembl_gene_id: BSONL12_16704
symbol: WecB
gene_biotype: protein_coding
description:
  MnaR; COG0381 UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.


ensembl_gene_id: BSONL12_16709
symbol: WecC
gene_biotype: protein_coding
description:
  UDP-glucose/GDP-mannose dehydrogenase family protein; COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.


ensembl_gene_id: BSONL12_16729
symbol: ManA
gene_biotype: protein_coding
description:
  Mannose-6-phosphate isomerase Pmi; COG1482 Phosphomannose isomerase; Belongs to the mannose-6-phosphate isomerase type 1 family.


ensembl_gene_id: BSONL12_16734
symbol: NrdG
gene_biotype: protein_coding
description:
  Anaerobic ribonucleoside-triphosphate reductase activating protein; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine.


ensembl_gene_id: BSONL12_16744
symbol: kdgT
gene_biotype: protein_coding
description:
  2-keto-3-deoxygluconate permease; The 2-keto-3-deoxygluconate permease transports the degraded pectin products into the bacterial cell, where they serve as carbon and energy sources. This is a hydrogen coupled transport system. Belongs to the KdgT transporter family.


ensembl_gene_id: BSONL12_16749
symbol: EME73392.1
gene_biotype: protein_coding
description:
  2-dehydro-3-deoxy-phosphogluconate aldolase KdgA; COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase.


ensembl_gene_id: BSONL12_16764
symbol: kduI
gene_biotype: protein_coding
description:
  5-keto-4-deoxyuronate isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family.


ensembl_gene_id: BSONL12_16769
symbol: EME73396.1
gene_biotype: protein_coding
description:
  2-deoxy-D-gluconate 3-dehydrogenase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).


ensembl_gene_id: BSONL12_16774
symbol: FrmA
gene_biotype: protein_coding
description:
  Alcohol dehydrogenase-like protein AdhB; COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases.


ensembl_gene_id: BSONL12_16779
symbol: EME73398.1
gene_biotype: protein_coding
description:
  Sugar transporter YwtG; COG0477 Permeases of the major facilitator superfamily; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.


ensembl_gene_id: BSONL12_16794
symbol: MepH
gene_biotype: protein_coding
description:
  gamma-DL-glutamyl hydrolase PgdS; COG0791 Cell wall-associated hydrolases (invasion-associated proteins).


ensembl_gene_id: BSONL12_16804
symbol: EME73403.1
gene_biotype: protein_coding
description:
  PGA biosynthesis protein CapA; COG2843 Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation).


ensembl_gene_id: BSONL12_16824
symbol: rbsK
gene_biotype: protein_coding
description:
  Ribokinase RbsK; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.


ensembl_gene_id: BSONL12_16834
symbol: rbsA
gene_biotype: protein_coding
description:
  Ribose ABC transporter ATP-binding protein RbsA; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.


ensembl_gene_id: BSONL12_16849
symbol: EME73410.1
gene_biotype: protein_coding
description:
  Ribose ABC transporter substrate-binding protein RbsB; COG1879 ABC-type sugar transport system, periplasmic component.


ensembl_gene_id: BSONL12_16854
symbol: EME73411.1
gene_biotype: protein_coding
description:
  Rgulatory protein YcgK (OxyR); COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: BSONL12_16869
symbol: IlvB
gene_biotype: protein_coding
description:
  Acetolactate synthase; COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]; Belongs to the TPP enzyme family.


ensembl_gene_id: BSONL12_16874
symbol: EME73415.1
gene_biotype: protein_coding
description:
  HTH-type transcriptional activator AlsR; COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: BSONL12_16929
symbol: ureA
gene_biotype: protein_coding
description:
  Urease subunit gamma; COG0831 Urea amidohydrolase (urease) gamma subunit; Belongs to the urease gamma subunit family.


ensembl_gene_id: BSONL12_16934
symbol: ureB
gene_biotype: protein_coding
description:
  Protein UreB; COG0832 Urea amidohydrolase (urease) beta subunit; Belongs to the urease beta subunit family.


ensembl_gene_id: BSONL12_16969
symbol: srlE
gene_biotype: protein_coding
description:
  PTS system glucitol/sorbitol-specific transporter subunit IIB; COG3732 Phosphotransferase system sorbitol-specific component IIBC.


ensembl_gene_id: BSONL12_16974
symbol: srlA
gene_biotype: protein_coding
description:
  PTS system glucitol/sorbitol-specific transporter subunit IIC; COG3730 Phosphotransferase system sorbitol-specific component IIC.


ensembl_gene_id: BSONL12_16984
symbol: EME73437.1
gene_biotype: protein_coding
description:
  Sorbitol operon regulator SorC; COG2390 Transcriptional regulator, contains sigma factor-related N-terminal domain.


ensembl_gene_id: BSONL12_16999
symbol: mscL
gene_biotype: protein_coding
description:
  Large-conductance mechanosensitive channel; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell.


ensembl_gene_id: BSONL12_17004
symbol: fabZ
gene_biotype: protein_coding
description:
  (3R)-hydroxymyristoyl-ACP dehydratase; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.


ensembl_gene_id: BSONL12_17079
symbol: EME73456.1
gene_biotype: protein_coding
description:
  2-oxo acid dehydrogenase, lipoyl-binding site protein; COG1253 Hemolysins and related proteins containing CBS domains.


ensembl_gene_id: BSONL12_17104
symbol: clpP-2
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease proteolytic subunit ClpP; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: BSONL12_17129
symbol: EME73464.1
gene_biotype: protein_coding
description:
  Cardiolipin synthase ClsA; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol.


ensembl_gene_id: BSONL12_17144
symbol: EntF
gene_biotype: protein_coding
description:
  Dimodular nonribosomal peptide synthase DhbF; COG1020 Non-ribosomal peptide synthetase modules and related proteins.


ensembl_gene_id: BSONL12_17164
symbol: KduD
gene_biotype: protein_coding
description:
  2,3-dihydroxybenzoate-2,3-dehydrogenase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: BSONL12_17184
symbol: EME73475.1
gene_biotype: protein_coding
description:
  Siderophore ABC transporter ATP-binding protein FeuA; COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component.


ensembl_gene_id: BSONL12_17224
symbol: moaA
gene_biotype: protein_coding
description:
  Molybdenum cofactor biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.


ensembl_gene_id: BSONL12_17229
symbol: fdhD
gene_biotype: protein_coding
description:
  Formate dehydrogenase accessory protein; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.


ensembl_gene_id: BSONL12_17239
symbol: NarB
gene_biotype: protein_coding
description:
  Oxidoreductase alpha/molybdopterin subunit; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: BSONL12_17259
symbol: murA
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.


ensembl_gene_id: BSONL12_17274
symbol: atpC
gene_biotype: protein_coding
description:
  F0F1 ATP synthase subunit epsilon; Produces ATP from ADP in the presence of a proton gradient across the membrane.


ensembl_gene_id: BSONL12_17279
symbol: atpD
gene_biotype: protein_coding
description:
  F0F1 ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.


ensembl_gene_id: BSONL12_17284
symbol: atpG
gene_biotype: protein_coding
description:
  F0F1 ATP synthase subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.


ensembl_gene_id: BSONL12_17289
symbol: atpA
gene_biotype: protein_coding
description:
  F0F1 ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.


ensembl_gene_id: BSONL12_17294
symbol: atpH
gene_biotype: protein_coding
description:
  F0F1 ATP synthase subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: BSONL12_17299
symbol: atpF
gene_biotype: protein_coding
description:
  F0F1 ATP synthase subunit B; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.


ensembl_gene_id: BSONL12_17304
symbol: atpE
gene_biotype: protein_coding
description:
  F0F1 ATP synthase subunit C; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: BSONL12_17309
symbol: atpB
gene_biotype: protein_coding
description:
  F0F1 ATP synthase subunit A; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.


ensembl_gene_id: BSONL12_17319
symbol: upp
gene_biotype: protein_coding
description:
  Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.


ensembl_gene_id: BSONL12_17324
symbol: glyA
gene_biotype: protein_coding
description:
  Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.


ensembl_gene_id: BSONL12_17339
symbol: EME73506.1
gene_biotype: protein_coding
description:
  Low molecular weight protein-tyrosine-phosphatase YwlE; COG0394 Protein-tyrosine-phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.


ensembl_gene_id: BSONL12_17344
symbol: mntP
gene_biotype: protein_coding
description:
  Hypothetical protein; Probably functions as a manganese efflux pump. Belongs to the MntP (TC 9.B.29) family.


ensembl_gene_id: BSONL12_17349
symbol: TsaC
gene_biotype: protein_coding
description:
  Hypothetical protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.


ensembl_gene_id: BSONL12_17379
symbol: NtdB
gene_biotype: protein_coding
description:
  Neotrehalosadiamine antibiotic synthesis protein NtdB; COG0561 Predicted hydrolases of the HAD superfamily.


ensembl_gene_id: BSONL12_17384
symbol: NtdA
gene_biotype: protein_coding
description:
  Neotrehalosadiamine antibiotic synthesis protein NtdA; COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; Belongs to the DegT/DnrJ/EryC1 family.


ensembl_gene_id: BSONL12_17394
symbol: prmC
gene_biotype: protein_coding
description:
  N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.


ensembl_gene_id: BSONL12_17399
symbol: prfA
gene_biotype: protein_coding
description:
  Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.


ensembl_gene_id: BSONL12_17409
symbol: racA
gene_biotype: protein_coding
description:
  Polar chromosome segregation protein; Required for the formation of axial filaments and for anchoring the origin regions at the cell poles in sporulating cells, thus ensuring proper chromosome segregation in the prespore. Binds in a dispersed manner throughout the chromosome but preferentially to sites clustered in the origin portion of the chromosome, causing condensation of the chromosome and its remodeling into an elongated, anchored structure; Belongs to the RacA family.


ensembl_gene_id: BSONL12_17434
symbol: rho
gene_biotype: protein_coding
description:
  Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.


ensembl_gene_id: BSONL12_17449
symbol: tal
gene_biotype: protein_coding
description:
  Translaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.


ensembl_gene_id: BSONL12_17469
symbol: pyrG
gene_biotype: protein_coding
description:
  CTP synthetase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.


ensembl_gene_id: BSONL12_17474
symbol: rpoE
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit delta; Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; Belongs to the RpoE family.


ensembl_gene_id: BSONL12_17504
symbol: EME73537.1
gene_biotype: protein_coding
description:
  Phospholipase; COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes; Belongs to the phospholipase D family. Cardiolipin synthase subfamily.


ensembl_gene_id: BSONL12_17529
symbol: SpeB
gene_biotype: protein_coding
description:
  Agmatinase; COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family; Belongs to the arginase family.


ensembl_gene_id: BSONL12_17534
symbol: speE
gene_biotype: protein_coding
description:
  Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.


ensembl_gene_id: BSONL12_17549
symbol: EME73546.1
gene_biotype: protein_coding
description:
  Antibiotic ABC transporter ATP-binding protein; COG1131 ABC-type multidrug transport system, ATPase component.


ensembl_gene_id: BSONL12_17614
symbol: lipL
gene_biotype: protein_coding
description:
  Lipoate-protein ligase A; Catalyzes the amidotransfer (transamidation) of the octanoyl moiety from octanoyl-GcvH to the lipoyl domain of the E2 subunit of lipoate-dependent enzymes; Belongs to the octanoyltransferase LipL family.


ensembl_gene_id: BSONL12_17619
symbol: PobA
gene_biotype: protein_coding
description:
  4-hydroxybenzoate 3-monooxygenase; COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases.


ensembl_gene_id: BSONL12_17644
symbol: DmpC
gene_biotype: protein_coding
description:
  2-hydroxymuconic semialdehyde dehydrogenase; COG1012 NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: BSONL12_17679
symbol: EME73572.1
gene_biotype: protein_coding
description:
  Spore coat protein GerQ; Essential for the localization of CwlJ in the spore coat and for spore germination triggered by calcium and dipicolinic acid (DPA). Its assembly into the spore coat is dependent on the coat morphogenetic proteins CotE and SpoIVA.


ensembl_gene_id: BSONL12_17724
symbol: ung
gene_biotype: protein_coding
description:
  uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.


ensembl_gene_id: BSONL12_17744
symbol: EME73585.1
gene_biotype: protein_coding
description:
  Sucrose-6-phosphate hydrolase SacA; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.


ensembl_gene_id: BSONL12_17749
symbol: BglF
gene_biotype: protein_coding
description:
  PTS system sucrose-specific transporter subuits IIBC; COG1264 Phosphotransferase system IIB components.


ensembl_gene_id: BSONL12_17774
symbol: EME73591.1
gene_biotype: protein_coding
description:
  Oxidoreductase YwcH; COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases.


ensembl_gene_id: BSONL12_17794
symbol: EME73595.1
gene_biotype: protein_coding
description:
  Rod-shape determining protein RodA; COG0772 Bacterial cell division membrane protein; Belongs to the SEDS family.


ensembl_gene_id: BSONL12_17829
symbol: QoxB
gene_biotype: protein_coding
description:
  Cytochrome aa3 quinol oxidase subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.


ensembl_gene_id: BSONL12_17834
symbol: QoxA
gene_biotype: protein_coding
description:
  Cytochrome aa3 quinol oxidase subunit 2; Catalyzes quinol oxidation with the concomitant reduction of oxygen to water. Subunit II transfers the electrons from a quinol to the binuclear center of the catalytic subunit I.


ensembl_gene_id: BSONL12_17859
symbol: EME73608.1
gene_biotype: protein_coding
description:
  Na+/solute symporter YwcA; COG4147 Predicted symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.


ensembl_gene_id: BSONL12_17879
symbol: thiE
gene_biotype: protein_coding
description:
  Thiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.


ensembl_gene_id: BSONL12_17884
symbol: thiM
gene_biotype: protein_coding
description:
  Hydroxyethylthiazole kinase; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family.


ensembl_gene_id: BSONL12_17889
symbol: EME73614.1
gene_biotype: protein_coding
description:
  Hypothetical protein; COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: BSONL12_17914
symbol: EME73619.1
gene_biotype: protein_coding
description:
  Sodium/proline symporter YcgO; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.


ensembl_gene_id: BSONL12_17919
symbol: RlmI
gene_biotype: protein_coding
description:
  S-adenosylmethionine-dependent methyltransferase YwbD; COG1092 Predicted SAM-dependent methyltransferases.


ensembl_gene_id: BSONL12_17934
symbol: WaaJ
gene_biotype: protein_coding
description:
  General stress glycosyltransferase GspA; COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases.


ensembl_gene_id: BSONL12_17969
symbol: DgoD
gene_biotype: protein_coding
description:
  Galactonate dehydratase; COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily.


ensembl_gene_id: BSONL12_18034
symbol: dltA
gene_biotype: protein_coding
description:
  D-alanine--poly(phosphoribitol) ligase subunit 1; Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D- alanyl carrier protein (Dcp) DltC. In an ATP-dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall. Belongs to  [...]


ensembl_gene_id: BSONL12_18039
symbol: EME73644.1
gene_biotype: protein_coding
description:
  D-alanine transfer protein DltB; Could be involved in the transport of activated D-alanine through the membrane.


ensembl_gene_id: BSONL12_18044
symbol: dltC
gene_biotype: protein_coding
description:
  D-alanine--poly(phosphoribitol) ligase subunit 2; Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC- carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall.


ensembl_gene_id: BSONL12_18049
symbol: EME73646.1
gene_biotype: protein_coding
description:
  COG3966 Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein).


ensembl_gene_id: BSONL12_18064
symbol: CelF
gene_biotype: protein_coding
description:
  Diacetylchitobiose-6-phosphate hydrolase; COG1486 Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases.


ensembl_gene_id: BSONL12_18074
symbol: EME73651.1
gene_biotype: protein_coding
description:
  Lichenan-specific phosphotransferase system EIIC component LicC; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.


ensembl_gene_id: BSONL12_18079
symbol: CelA
gene_biotype: protein_coding
description:
  Trigger enzyme lichenan-specific phosphotransferase system EIIB component LicB; COG1440 Phosphotransferase system cellobiose-specific component IIB.


ensembl_gene_id: BSONL12_18099
symbol: WbpI
gene_biotype: protein_coding
description:
  COG0381 UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.


ensembl_gene_id: BSONL12_18129
symbol: EME73662.1
gene_biotype: protein_coding
description:
  Methylisocitrate lyase YqiQ; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate.


ensembl_gene_id: BSONL12_18144
symbol: EME73665.1
gene_biotype: protein_coding
description:
  Glycoside hydrolase family protein; COG1132 ABC-type multidrug transport system, ATPase and permease components.


ensembl_gene_id: BSONL12_18164
symbol: EME73669.1
gene_biotype: protein_coding
description:
  ABC transporter permease YxlG; COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component.


ensembl_gene_id: BSONL12_18169
symbol: EME73670.1
gene_biotype: protein_coding
description:
  ABC transporter ATP-binding protein YxlF; COG1131 ABC-type multidrug transport system, ATPase component.


ensembl_gene_id: BSONL12_18174
symbol: EME73671.1
gene_biotype: protein_coding
description:
  Transmembrane protein YxlE; COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes.


ensembl_gene_id: BSONL12_18229
symbol: nnrD
gene_biotype: protein_coding
description:
  Carbohydrate kinase-like protein YxkO; Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S-and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration.


ensembl_gene_id: BSONL12_18239
symbol: EME73682.1
gene_biotype: protein_coding
description:
  ABC transporter ATP-binding protein/permease CydD; COG4987 ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components.


ensembl_gene_id: BSONL12_18244
symbol: EME73683.1
gene_biotype: protein_coding
description:
  ABC transporter ATP-binding protein/permease CydC; COG4988 ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components.


ensembl_gene_id: BSONL12_18319
symbol: EME73698.1
gene_biotype: protein_coding
description:
  ABC transporter permease YxdM; COG0577 ABC-type antimicrobial peptide transport system, permease component.


ensembl_gene_id: BSONL12_18349
symbol: EME73704.1
gene_biotype: protein_coding
description:
  Pyridoxamine 5'-phosphate oxidase-like FMN-binding protein; COG3467 Predicted flavin-nucleotide-binding protein.


ensembl_gene_id: BSONL12_18449
symbol: EME73722.1
gene_biotype: protein_coding
description:
  HTH-type transcriptional regulator ArcR; COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases.


ensembl_gene_id: BSONL12_18459
symbol: EME73724.1
gene_biotype: protein_coding
description:
  Lactose/cellobiose-specific phosphotransferase system IIC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.


ensembl_gene_id: BSONL12_18474
symbol: EME73727.1
gene_biotype: protein_coding
description:
  Bacitracin transport ATP-binding protein; COG1131 ABC-type multidrug transport system, ATPase component.


ensembl_gene_id: BSONL12_18479
symbol: EME73728.1
gene_biotype: protein_coding
description:
  MrsR2; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.


ensembl_gene_id: BSONL12_18504
symbol: pepT
gene_biotype: protein_coding
description:
  Peptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family.


ensembl_gene_id: BSONL12_18509
symbol: ScrK
gene_biotype: protein_coding
description:
  Fructokinase; COG0524 Sugar kinases, ribokinase family; Belongs to the carbohydrate kinase PfkB family.


ensembl_gene_id: BSONL12_18534
symbol: EME73739.1
gene_biotype: protein_coding
description:
  Extracellular solute-binding protein; COG1653 ABC-type sugar transport system, periplasmic component.


ensembl_gene_id: BSONL12_18559
symbol: EME73744.1
gene_biotype: protein_coding
description:
  Mannosyltransferase YkcB; COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family.


ensembl_gene_id: BSONL12_18589
symbol: EME73750.1
gene_biotype: protein_coding
description:
  Family 1 glycoside hydrolase; COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase; Belongs to the glycosyl hydrolase 1 family.


ensembl_gene_id: BSONL12_18594
symbol: EME73751.1
gene_biotype: protein_coding
description:
  PTS system beta-glucoside-specific transporter subunits IIABC; COG1264 Phosphotransferase system IIB components.


ensembl_gene_id: BSONL12_18604
symbol: EME73753.1
gene_biotype: protein_coding
description:
  Thiamine ABC transporter permease ThiX; COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters.


ensembl_gene_id: BSONL12_18609
symbol: EME73754.1
gene_biotype: protein_coding
description:
  Thiamine ABC transporter ATP-binding protein ThiW; COG1122 ABC-type cobalt transport system, ATPase component.


ensembl_gene_id: BSONL12_18619
symbol: EME73756.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway; Belongs to the TenA family.


ensembl_gene_id: BSONL12_18629
symbol: EME73758.1
gene_biotype: protein_coding
description:
  Lactose specific PTS system transcriptional repressor; COG1349 Transcriptional regulators of sugar metabolism.


ensembl_gene_id: BSONL12_18634
symbol: lacD
gene_biotype: protein_coding
description:
  Tagatose-bisphosphate aldolase 2; COG3684 Tagatose-1,6-bisphosphate aldolase; Belongs to the aldolase LacD family.


ensembl_gene_id: BSONL12_18639
symbol: LacC
gene_biotype: protein_coding
description:
  Tagatose-6-phosphate kinase, phosphofructokinase I; COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB); Belongs to the carbohydrate kinase PfkB family.


ensembl_gene_id: BSONL12_18654
symbol: EME73763.1
gene_biotype: protein_coding
description:
  Lactose phosphotransferase system transcriptional repressor; COG1349 Transcriptional regulators of sugar metabolism.


ensembl_gene_id: BSONL12_18659
symbol: EME73764.1
gene_biotype: protein_coding
description:
  PTS system galactitol/fructose specific transporter subunit IIBC; COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type).


ensembl_gene_id: BSONL12_18664
symbol: EME73765.1
gene_biotype: protein_coding
description:
  PTS system galactitol/fructose specific transporter subunit IIB; COG3414 Phosphotransferase system, galactitol-specific IIB component.


ensembl_gene_id: BSONL12_18669
symbol: EME73766.1
gene_biotype: protein_coding
description:
  PTS system galactitol (gat) transporter subunit IIC; COG3775 Phosphotransferase system, galactitol-specific IIC component.


ensembl_gene_id: BSONL12_18704
symbol: EME73773.1
gene_biotype: protein_coding
description:
  Bacitracin ABC transporter ATP-binding protein BceA; COG1136 ABC-type antimicrobial peptide transport system, ATPase component.


ensembl_gene_id: BSONL12_18714
symbol: EME73775.1
gene_biotype: protein_coding
description:
  Sensory transduction protein BceR; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.


ensembl_gene_id: BSONL12_18724
symbol: EME73777.1
gene_biotype: protein_coding
description:
  Trigger enzyme beta-glucoside-specific phosphotransferase system EIIBCA component; COG1264 Phosphotransferase system IIB components.


ensembl_gene_id: BSONL12_18744
symbol: EME73781.1
gene_biotype: protein_coding
description:
  endo-1,5-alpha-L-arabinosidase YxiA; COG3507 Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.


ensembl_gene_id: BSONL12_18749
symbol: dbpA
gene_biotype: protein_coding
description:
  Non-specific DNA-binding protein; DEAD-box RNA helicase involved in the assembly of the 50S ribosomal subunit. Has an RNA-dependent ATPase activity, which is specific for 23S rRNA, and a 3' to 5' RNA helicase activity that uses the energy of ATP hydrolysis to destabilize and unwind short rRNA duplexes.


ensembl_gene_id: BSONL12_18784
symbol: EME73789.1
gene_biotype: protein_coding
description:
  Pyrimidine nucleoside transport protein NupC; COG1972 Nucleoside permease; Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family.


ensembl_gene_id: BSONL12_18789
symbol: deoC
gene_biotype: protein_coding
description:
  Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.


ensembl_gene_id: BSONL12_18794
symbol: EME73791.1
gene_biotype: protein_coding
description:
  Transcriptional repressor DeoR; COG2390 Transcriptional regulator, contains sigma factor-related N-terminal domain.


ensembl_gene_id: BSONL12_18844
symbol: avtA
gene_biotype: protein_coding
description:
  Valine--pyruvate transaminase; COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase.


ensembl_gene_id: BSONL12_18869
symbol: EME73803.1
gene_biotype: protein_coding
description:
  2-deoxy-5-keto-D-gluconic acid 6-phosphate aldolase; COG0191 Fructose/tagatose bisphosphate aldolase.


ensembl_gene_id: BSONL12_18899
symbol: iolE
gene_biotype: protein_coding
description:
  2-keto-myo-inositol dehydratase IolE; Catalyzes the dehydration of inosose (2-keto-myo-inositol, 2KMI or 2,4,6/3,5-pentahydroxycyclohexanone) to 3D-(3,5/4)- trihydroxycyclohexane-1,2-dione (D-2,3-diketo-4-deoxy-epi-inositol).


ensembl_gene_id: BSONL12_18904
symbol: iolD
gene_biotype: protein_coding
description:
  3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase IolD; Involved in the cleavage of the C1-C2 bond of 3D-(3,5/4)- trihydroxycyclohexane-1,2-dione (THcHDO) to yield 5-deoxy-glucuronate (5DG).


ensembl_gene_id: BSONL12_18909
symbol: iolC
gene_biotype: protein_coding
description:
  5-dehydro-2-deoxygluconokinase IolC; Catalyzes the phosphorylation of 5-dehydro-2-deoxy-D- gluconate (2-deoxy-5-keto-D-gluconate or DKG) to 6-phospho-5-dehydro-2- deoxy-D-gluconate (DKGP).


ensembl_gene_id: BSONL12_18919
symbol: iolA-2
gene_biotype: protein_coding
description:
  Methylmalonate-semialdehyde dehydrogenase; Catalyzes the oxidation of malonate semialdehyde (MSA) and methylmalonate semialdehyde (MMSA) into acetyl-CoA and propanoyl-CoA, respectively.


ensembl_gene_id: BSONL12_18929
symbol: IolS
gene_biotype: protein_coding
description:
  Aldo/keto reductase family protein IolS; COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases).


ensembl_gene_id: BSONL12_18949
symbol: EME73817.1
gene_biotype: protein_coding
description:
  ABC transporter ATP-binding protein YfmM; COG0488 ATPase components of ABC transporters with duplicated ATPase domains.


ensembl_gene_id: BSONL12_18964
symbol: EME73820.1
gene_biotype: protein_coding
description:
  HAD superfamily hydrolase; COG4359 Uncharacterized conserved protein, possibly involved in methylthioadenosine recycling.


ensembl_gene_id: BSONL12_18974
symbol: EME73822.1
gene_biotype: protein_coding
description:
  Hydroxamate siderophore ABC transporter substrate-binding protein YxeB; COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component.


ensembl_gene_id: BSONL12_18989
symbol: EME73825.1
gene_biotype: protein_coding
description:
  Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.


ensembl_gene_id: BSONL12_18999
symbol: EME73827.1
gene_biotype: protein_coding
description:
  Membrane-bound acyltransferase YfiQ; COG3936 Protein involved in polysaccharide intercellular adhesin (PIA) synthesis/biofilm formation.


ensembl_gene_id: BSONL12_19009
symbol: EME73829.1
gene_biotype: protein_coding
description:
  ABC transporter ATP-binding protein YxdL; COG1136 ABC-type antimicrobial peptide transport system, ATPase component.


ensembl_gene_id: BSONL12_19059
symbol: EME73839.1
gene_biotype: protein_coding
description:
  Cyclodextrin/maltodextrin ABC transporter permease YvfM; COG3833 ABC-type maltose transport systems, permease component.


ensembl_gene_id: BSONL12_19064
symbol: EME73840.1
gene_biotype: protein_coding
description:
  Cyclodextrin/maltodextrin ABC transporter permease YvfL; COG1175 ABC-type sugar transport systems, permease components.


ensembl_gene_id: BSONL12_19069
symbol: EME73841.1
gene_biotype: protein_coding
description:
  Cyclodextrin/maltodextrin ABC transporter ATP-binding protein CycB; COG2182 Maltose-binding periplasmic proteins/domains.


ensembl_gene_id: BSONL12_19079
symbol: galK
gene_biotype: protein_coding
description:
  Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.


ensembl_gene_id: BSONL12_19119
symbol: EME73851.1
gene_biotype: protein_coding
description:
  Gluconate kinase; COG1070 Sugar (pentulose and hexulose) kinases; Belongs to the FGGY kinase family.


ensembl_gene_id: BSONL12_19134
symbol: AdhE
gene_biotype: protein_coding
description:
  Bifunctional acetaldehyde-CoA/alcohol dehydrogenase; COG1012 NAD-dependent aldehyde dehydrogenases; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.


ensembl_gene_id: BSONL12_19139
symbol: EME73855.1
gene_biotype: protein_coding
description:
  Alkyl hydroperoxide reductase small subunit AhpC; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.


ensembl_gene_id: BSONL12_19154
symbol: EME73858.1
gene_biotype: protein_coding
description:
  Ferrichrome import ABC transporter ATP-binding protein FhuC; COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components.


ensembl_gene_id: BSONL12_19159
symbol: EME73859.1
gene_biotype: protein_coding
description:
  Ferrichrome import ABC transporter ferrichrome-binding protein FhuD; COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component.


ensembl_gene_id: BSONL12_19164
symbol: EME73860.1
gene_biotype: protein_coding
description:
  Ferrichrome import ABC transporter permease FhuB; COG0609 ABC-type Fe3+-siderophore transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: BSONL12_19184
symbol: EME73864.1
gene_biotype: protein_coding
description:
  ABC transporter ATP-binding protein YvfR; COG1131 ABC-type multidrug transport system, ATPase component.


ensembl_gene_id: BSONL12_19224
symbol: rlmH
gene_biotype: protein_coding
description:
  rRNA large subunit methyltransferase; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.


ensembl_gene_id: BSONL12_19239
symbol: EME73875.1
gene_biotype: protein_coding
description:
  GCN5-related N-acetyltransferase; COG0454 Histone acetyltransferase HPA2 and related acetyltransferases.


ensembl_gene_id: BSONL12_19284
symbol: purA
gene_biotype: protein_coding
description:
  Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.


ensembl_gene_id: BSONL12_19294
symbol: EME73886.1
gene_biotype: protein_coding
description:
  Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.


ensembl_gene_id: BSONL12_19319
symbol: nagB
gene_biotype: protein_coding
description:
  Glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion.


ensembl_gene_id: BSONL12_19329
symbol: murQ-2
gene_biotype: protein_coding
description:
  N-acetylmuramic acid 6-phosphate etherase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate.


ensembl_gene_id: BSONL12_19344
symbol: EME73896.1
gene_biotype: protein_coding
description:
  Cyclic dinucleotide phosphodiesterase YybT; Has phosphodiesterase (PDE) activity against cyclic-di-AMP (c-di-AMP); Belongs to the GdpP/PdeA phosphodiesterase family.


ensembl_gene_id: BSONL12_19374
symbol: rpsR
gene_biotype: protein_coding
description:
  30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.


ensembl_gene_id: BSONL12_19379
symbol: EME73903.1
gene_biotype: protein_coding
description:
  Single-strand DNA-binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.


ensembl_gene_id: BSONL12_19389
symbol: ychF
gene_biotype: protein_coding
description:
  GTP-binding protein YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.


ensembl_gene_id: BSONL12_19409
symbol: EME73909.1
gene_biotype: protein_coding
description:
  Stage 0 sporulation protein Spo0J; COG1475 Predicted transcriptional regulators; Belongs to the ParB family.


ensembl_gene_id: BSONL12_19414
symbol: EME73910.1
gene_biotype: protein_coding
description:
  Chromosome partitioning protein transcriptional regulator; COG1192 ATPases involved in chromosome partitioning.


ensembl_gene_id: BSONL12_19424
symbol: EME73912.1
gene_biotype: protein_coding
description:
  COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family.


ensembl_gene_id: BSONL12_19429
symbol: noc
gene_biotype: protein_coding
description:
  Nucleoid occlusion protein Noc; Effects nucleoid occlusion by binding relatively nonspecifically to DNA and preventing the assembly of the division machinery in the vicinity of the nucleoid, especially under conditions that disturb the cell cycle. It helps to coordinate cell division and chromosome segregation by preventing the formation of the Z ring through the nucleoid, which would cause chromosome breakage. Belongs to the ParB family.


ensembl_gene_id: BSONL12_19434
symbol: gidB
gene_biotype: protein_coding
description:
  16S rRNA methyltransferase GidB; Specifically methylates the N7 position of guanine in position 535 of 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.


ensembl_gene_id: BSONL12_19439
symbol: mnmG
gene_biotype: protein_coding
description:
  tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.


ensembl_gene_id: BSONL12_19444
symbol: trmE
gene_biotype: protein_coding
description:
  tRNA modification GTPase TrmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.


ensembl_gene_id: BSONL12_19459
symbol: rnpA
gene_biotype: protein_coding
description:
  Ribonuclease P; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.


ensembl_gene_id: BSONL12_19469
symbol: dnaA
gene_biotype: protein_coding
description:
  Chromosomal replication initiation protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.


ensembl_gene_id: BSONL12_19474
symbol: DnaN
gene_biotype: protein_coding
description:
  DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of  [...]


ensembl_gene_id: BSONL12_19484
symbol: recF
gene_biotype: protein_coding
description:
  Recombination protein F; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family.


ensembl_gene_id: BSONL12_19494
symbol: gyrB
gene_biotype: protein_coding
description:
  DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: BSONL12_19499
symbol: gyrA
gene_biotype: protein_coding
description:
  DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: BSONL12_19576
symbol: EME72845.1
gene_biotype: protein_coding
description:
  Dipeptide/oligopeptide ABC transporter substrate-binding protein; COG0747 ABC-type dipeptide transport system, periplasmic component.


ensembl_gene_id: BSONL12_19581
symbol: EME72846.1
gene_biotype: protein_coding
description:
  Dipeptide/oligopeptide ABC transporter ATP-binding protein; COG4608 ABC-type oligopeptide transport system, ATPase component; Belongs to the ABC transporter superfamily.


ensembl_gene_id: BSONL12_19586
symbol: EME72847.1
gene_biotype: protein_coding
description:
  Dipeptide/oligopeptide ABC transporter ATP-binding protein; COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; Belongs to the ABC transporter superfamily.


ensembl_gene_id: BSONL12_19591
symbol: MsbA
gene_biotype: protein_coding
description:
  ABC transporter ATP-binding protein YgaD; COG1132 ABC-type multidrug transport system, ATPase and permease components.


ensembl_gene_id: BSONL12_19596
symbol: EME72849.1
gene_biotype: protein_coding
description:
  COG3557 Uncharacterized domain/protein associated with RNAses G and E; Belongs to the UPF0374 family.


ensembl_gene_id: BSONL12_19611
symbol: PhbB
gene_biotype: protein_coding
description:
  Enoyl-(acyl carrier protein) reductase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).


ensembl_gene_id: BSONL12_19706
symbol: mprF
gene_biotype: protein_coding
description:
  MprF; Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms.


ensembl_gene_id: BSONL12_19776
symbol: EME72885.1
gene_biotype: protein_coding
description:
  PTS system alpha-glucoside-specific transporter subunit IICB; COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific.


ensembl_gene_id: BSONL12_19786
symbol: GlvA
gene_biotype: protein_coding
description:
  6-phospho-alpha-glucosidase MalA; COG1486 Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases.


ensembl_gene_id: BSONL12_19811
symbol: PdhB
gene_biotype: protein_coding
description:
  Acetoin dehydrogenase TPP-dependent subunit beta AcoB; COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit.


ensembl_gene_id: BSONL12_19816
symbol: PdhA
gene_biotype: protein_coding
description:
  Dihydrolipoyl dehydrogenase E1 alpha subunit; COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit.


ensembl_gene_id: BSONL12_19831
symbol: ScrA
gene_biotype: protein_coding
description:
  Trigger enzyme sucrose-specific phosphotransferase system EIIBC component SacX; COG1264 Phosphotransferase system IIB components.


ensembl_gene_id: BSONL12_19851
symbol: EME72900.1
gene_biotype: protein_coding
description:
  COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.


ensembl_gene_id: BSONL12_19861
symbol: corA
gene_biotype: protein_coding
description:
  Magnesium and cobalt transport protein CorA; Mediates influx of magnesium ions. Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.


ensembl_gene_id: BSONL12_19901
symbol: EME72910.1
gene_biotype: protein_coding
description:
  H+/Ca2+ exchanger YfkE; Ca(+)/H(+) antiporter that extrudes calcium in exchange for external protons.


ensembl_gene_id: BSONL12_19931
symbol: EME72916.1
gene_biotype: protein_coding
description:
  COG0394 Protein-tyrosine-phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.


ensembl_gene_id: BSONL12_19951
symbol: YfkN
gene_biotype: protein_coding
description:
  Bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases.


ensembl_gene_id: BSONL12_19971
symbol: WbpA
gene_biotype: protein_coding
description:
  Nucleotide sugar dehydrogenase; COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.


ensembl_gene_id: BSONL12_20045
symbol: EME72598.1
gene_biotype: protein_coding
description:
  Penicillin-binding protein PbpX; COG1680 Beta-lactamase class C and other penicillin binding proteins.


ensembl_gene_id: BSONL12_20065
symbol: NagZ
gene_biotype: protein_coding
description:
  N-acetylglucosaminidase NagZ; COG1472 Beta-glucosidase-related glycosidases; Belongs to the glycosyl hydrolase 3 family.


ensembl_gene_id: BSONL12_20075
symbol: EME72604.1
gene_biotype: protein_coding
description:
  N-acetyl muramic acid-specific phosphotransferase system EIIBC component MurP; COG1264 Phosphotransferase system IIB components.


ensembl_gene_id: BSONL12_20085
symbol: murQ
gene_biotype: protein_coding
description:
  N-acetylmuramic acid-6-phosphate etherase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate.


ensembl_gene_id: BSONL12_20110
symbol: dacA
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria; Belongs to the adenylate cyclase family. DacA/CdaA subfamily.


ensembl_gene_id: BSONL12_20120
symbol: glmM
gene_biotype: protein_coding
description:
  Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.


ensembl_gene_id: BSONL12_20125
symbol: glmS
gene_biotype: protein_coding
description:
  Glucosamine--fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.


ensembl_gene_id: BSONL12_20140
symbol: EME72617.1
gene_biotype: protein_coding
description:
  Transketolase domain-containing protein; COG3959 Transketolase, N-terminal subunit; overlaps another CDS with the same product name.


ensembl_gene_id: BSONL12_20145
symbol: EME72618.1
gene_biotype: protein_coding
description:
  Transketolase domain-containing protein; COG3958 Transketolase, C-terminal subunit; overlaps another CDS with the same product name.


ensembl_gene_id: BSONL12_20150
symbol: EME72619.1
gene_biotype: protein_coding
description:
  Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.


ensembl_gene_id: BSONL12_20155
symbol: EME72620.1
gene_biotype: protein_coding
description:
  PTS system beta-glucoside-specific EIIBCA component; COG1264 Phosphotransferase system IIB components.


ensembl_gene_id: BSONL12_20165
symbol: EME72622.1
gene_biotype: protein_coding
description:
  PTS system glucose subfamily transporter subunit IIA; COG2190 Phosphotransferase system IIA components.


ensembl_gene_id: BSONL12_20190
symbol: EME72627.1
gene_biotype: protein_coding
description:
  ABC transporter permease; COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component.


ensembl_gene_id: BSONL12_20235
symbol: EME72636.1
gene_biotype: protein_coding
description:
  Lantibiotic srtA precursor; Lanthionine-containing peptide antibiotic (lantibiotic) active on Gram-positive bacteria. The bactericidal activity of lantibiotics is based on depolarization of energized bacterial cytoplasmic membranes, initiated by the formation of aqueous transmembrane pores.


ensembl_gene_id: BSONL12_20240
symbol: EME72637.1
gene_biotype: protein_coding
description:
  Subtilin ABC transporter ATP-binding protein; COG1132 ABC-type multidrug transport system, ATPase and permease components.


ensembl_gene_id: BSONL12_20280
symbol: AbcA
gene_biotype: protein_coding
description:
  ABC transporter ATP-binding protein BmrA; COG1132 ABC-type multidrug transport system, ATPase and permease components.


ensembl_gene_id: BSONL12_20305
symbol: EME72650.1
gene_biotype: protein_coding
description:
  Hypothetical protein; COG2761 Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis.


ensembl_gene_id: BSONL12_20415
symbol: EME72670.1
gene_biotype: protein_coding
description:
  Putative transport protein YdeD; COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily.


ensembl_gene_id: BSONL12_20425
symbol: PcaD
gene_biotype: protein_coding
description:
  Carboxylesterase NP; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).


ensembl_gene_id: BSONL12_20465
symbol: EME72680.1
gene_biotype: protein_coding
description:
  Putative streptothricin acetyltransferase; COG0454 Histone acetyltransferase HPA2 and related acetyltransferases.


ensembl_gene_id: BSONL12_20565
symbol: vgb
gene_biotype: protein_coding
description:
  Virginiamycin B lyase Vgb; Inactivates the type B streptogramin antibiotics by linearizing the lactone ring at the ester linkage, generating a free phenylglycine carboxylate and converting the threonyl moiety into 2- amino-butenoic acid.


ensembl_gene_id: BSONL12_20580
symbol: nagB-2
gene_biotype: protein_coding
description:
  Glucosamine-6-phosphate isomerase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion.


ensembl_gene_id: BSONL12_20665
symbol: tatC-2
gene_biotype: protein_coding
description:
  Twin-arginine translocase component TatCD; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes.


ensembl_gene_id: BSONL12_20670
symbol: KdgD
gene_biotype: protein_coding
description:
  5-dehydro-4-deoxyglucarate dehydratase; COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; Belongs to the DapA family.


ensembl_gene_id: BSONL12_20685
symbol: gudD
gene_biotype: protein_coding
description:
  Glucarate dehydratase; COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily.


ensembl_gene_id: BSONL12_20715
symbol: EME72730.1
gene_biotype: protein_coding
description:
  Sensory transduction protein YcbL; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.


ensembl_gene_id: BSONL12_20730
symbol: EME72733.1
gene_biotype: protein_coding
description:
  Transmembrane protein YcbO; COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component.


ensembl_gene_id: BSONL12_20830
symbol: EME72753.1
gene_biotype: protein_coding
description:
  Dehydrogenase/reductase YusR; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: BSONL12_20860
symbol: EME72759.1
gene_biotype: protein_coding
description:
  Peptidase; COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase; Belongs to the peptidase M20A family.


ensembl_gene_id: BSONL12_20865
symbol: EME72760.1
gene_biotype: protein_coding
description:
  COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D; Belongs to the asparaginase 1 family.


ensembl_gene_id: BSONL12_20875
symbol: NylA
gene_biotype: protein_coding
description:
  Amidase; COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases; Belongs to the amidase family.


ensembl_gene_id: BSONL12_20905
symbol: EME72768.1
gene_biotype: protein_coding
description:
  Glutamyl endopeptidase blaSE; COG3591 V8-like Glu-specific endopeptidase; Belongs to the peptidase S1B family.


ensembl_gene_id: BSONL12_20910
symbol: EME72769.1
gene_biotype: protein_coding
description:
  Glucose 1-dehydrogenase YcdF; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).


ensembl_gene_id: BSONL12_20935
symbol: LimB
gene_biotype: protein_coding
description:
  Luciferase-like protein YceB; COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases.


ensembl_gene_id: BSONL12_20965
symbol: EME72780.1
gene_biotype: protein_coding
description:
  Stress protein YceC; COG2310 Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1.


ensembl_gene_id: BSONL12_20970
symbol: EME72781.1
gene_biotype: protein_coding
description:
  Stress protein YceD; COG2310 Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1.


ensembl_gene_id: BSONL12_20975
symbol: EME72782.1
gene_biotype: protein_coding
description:
  Stress protein YceE; COG2310 Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1.


ensembl_gene_id: BSONL12_21015
symbol: EME72790.1
gene_biotype: protein_coding
description:
  TelA-like protein YceH; COG3853 Uncharacterized protein involved in tellurite resistance; Belongs to the TelA family.


ensembl_gene_id: BSONL12_21055
symbol: ldh
gene_biotype: protein_coding
description:
  L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family.


ensembl_gene_id: BSONL12_21060
symbol: EME72797.1
gene_biotype: protein_coding
description:
  L-lactate permease LctP; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.


ensembl_gene_id: BSONL12_21075
symbol: nadE
gene_biotype: protein_coding
description:
  NAD synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source; Belongs to the NAD synthetase family.


ensembl_gene_id: BSONL12_21080
symbol: aroK
gene_biotype: protein_coding
description:
  Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.


ensembl_gene_id: BSONL12_21100
symbol: rocA
gene_biotype: protein_coding
description:
  COG1012 NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family. RocA subfamily.


ensembl_gene_id: BSONL12_21125
symbol: EME72810.1
gene_biotype: protein_coding
description:
  COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family.


ensembl_gene_id: BSONL12_21160
symbol: EME72817.1
gene_biotype: protein_coding
description:
  ABC transporter extracellular-binding protein YckB; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: BSONL12_21165
symbol: EME72818.1
gene_biotype: protein_coding
description:
  NAD(P)H oxidoreductase MdaB; COG2249 Putative NADPH-quinone reductase (modulator of drug activity B).


ensembl_gene_id: BSONL12_21170
symbol: EME72819.1
gene_biotype: protein_coding
description:
  Iron-dicitrate ABC transporter binding lipoprotein; COG4594 ABC-type Fe3+-citrate transport system, periplasmic component.


ensembl_gene_id: BSONL12_21180
symbol: EME72821.1
gene_biotype: protein_coding
description:
  Iron ABC transporter permease; COG0609 ABC-type Fe3+-siderophore transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: BSONL12_21185
symbol: EME72822.1
gene_biotype: protein_coding
description:
  Iron-dicitrate ABC transporter ATP-bindingprotein; COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components.


ensembl_gene_id: BSONL12_21195
symbol: EME72824.1
gene_biotype: protein_coding
description:
  Cellulase BglC; COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase; Belongs to the glycosyl hydrolase 1 family.


ensembl_gene_id: BSONL12_21210
symbol: EME72827.1
gene_biotype: protein_coding
description:
  FAD-binding monooxygenase; COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases.


ensembl_gene_id: BSONL12_21230
symbol: EME72831.1
gene_biotype: protein_coding
description:
  Spermidine/putrescine ABC transporter substrate-binding protein; COG0687 Spermidine/putrescine-binding periplasmic protein.


ensembl_gene_id: BSONL12_21299
symbol: EME72484.1
gene_biotype: protein_coding
description:
  COG0776 Bacterial nucleoid DNA-binding protein; Belongs to the bacterial histone-like protein family.


ensembl_gene_id: BSONL12_21359
symbol: EME72496.1
gene_biotype: protein_coding
description:
  SPBc2 prophage-derived protein YonB; COG3842 ABC-type spermidine/putrescine transport systems, ATPase components.


ensembl_gene_id: BSONL12_21499
symbol: EME72524.1
gene_biotype: protein_coding
description:
  SPbeta phage protein; COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains).


ensembl_gene_id: BSONL12_21664
symbol: nrdI-2
gene_biotype: protein_coding
description:
  Ribonucleotide reductase stimulatory protein; Probably involved in ribonucleotide reductase function.


ensembl_gene_id: BSONL12_21674
symbol: hfq
gene_biotype: protein_coding
description:
  RNA-binding protein Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family.


ensembl_gene_id: BSONL12_21679
symbol: miaA
gene_biotype: protein_coding
description:
  tRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.


ensembl_gene_id: BSONL12_21749
symbol: EME72574.1
gene_biotype: protein_coding
description:
  UDP-glucosyltransferase YjiC; COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase.


ensembl_gene_id: BSONL12_21779
symbol: EME72580.1
gene_biotype: protein_coding
description:
  Tyrocidine synthetase III; COG1020 Non-ribosomal peptide synthetase modules and related proteins; overlaps another CDS with the same product name.


ensembl_gene_id: BSONL12_21819
symbol: EME72588.1
gene_biotype: protein_coding
description:
  COG1020 Non-ribosomal peptide synthetase modules and related proteins; Belongs to the ATP-dependent AMP-binding enzyme family.


ensembl_gene_id: BSONL12_21839
symbol: mcsB
gene_biotype: protein_coding
description:
  ATP:guanido phosphotransferase; Catalyzes the specific phosphorylation of arginine residues in a large number of proteins. Is part of the bacterial stress response system. Protein arginine phosphorylation has a physiologically important role and is involved in the regulation of many critical cellular processes, such as protein homeostasis, motility, competence, and stringent and stress responses, by regulating gene expression and protein activity.


ensembl_gene_id: BSONL12_21844
symbol: EME72396.1
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease ClpC; COG0542 ATPases with chaperone activity, ATP-binding subunit; Belongs to the ClpA/ClpB family.


ensembl_gene_id: BSONL12_21849
symbol: radA
gene_biotype: protein_coding
description:
  DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.


ensembl_gene_id: BSONL12_21854
symbol: disA
gene_biotype: protein_coding
description:
  DNA integrity scanning protein DisA; Has also diadenylate cyclase activity, catalyzing the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c-di-AMP acts as a signaling molecule that couples DNA integrity with progression of sporulation. The rise in c-di-AMP level generated by DisA while scanning the chromosome, operates as a positive signal that advances sporulation; upon encountering a lesion, the DisA focus arrests at the damaged site and halts c-di-AMP synthesis.


ensembl_gene_id: BSONL12_21864
symbol: ispD
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP).


ensembl_gene_id: BSONL12_21869
symbol: ispF
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP).


ensembl_gene_id: BSONL12_21874
symbol: gltX
gene_biotype: protein_coding
description:
  glutamyl-tRNA ligase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu).


ensembl_gene_id: BSONL12_21889
symbol: mrnC
gene_biotype: protein_coding
description:
  Ribonuclease MrnC; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family.


ensembl_gene_id: BSONL12_21894
symbol: RlmB
gene_biotype: protein_coding
description:
  TrmH-family tRNA/rRNA methyltransferase YacO; COG0566 rRNA methylases; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: BSONL12_21914
symbol: secE
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.


ensembl_gene_id: BSONL12_21919
symbol: nusG
gene_biotype: protein_coding
description:
  Transcription antitermination protein NusG; Participates in transcription elongation, termination and antitermination.


ensembl_gene_id: BSONL12_21924
symbol: rplK
gene_biotype: protein_coding
description:
  50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.


ensembl_gene_id: BSONL12_21929
symbol: rplA
gene_biotype: protein_coding
description:
  50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.


ensembl_gene_id: BSONL12_21934
symbol: rplJ
gene_biotype: protein_coding
description:
  50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.


ensembl_gene_id: BSONL12_21939
symbol: rplL
gene_biotype: protein_coding
description:
  50S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.


ensembl_gene_id: BSONL12_21949
symbol: rpoB
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: BSONL12_21959
symbol: EME72419.1
gene_biotype: protein_coding
description:
  COG1358 Ribosomal protein HS6-type (S12/L30/L7a); Belongs to the eukaryotic ribosomal protein eL8 family.


ensembl_gene_id: BSONL12_21964
symbol: rpsL
gene_biotype: protein_coding
description:
  30S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.


ensembl_gene_id: BSONL12_21969
symbol: rpsG
gene_biotype: protein_coding
description:
  30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.


ensembl_gene_id: BSONL12_21974
symbol: fusA
gene_biotype: protein_coding
description:
  Elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.


ensembl_gene_id: BSONL12_21979
symbol: tuf
gene_biotype: protein_coding
description:
  Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.


ensembl_gene_id: BSONL12_21984
symbol: rpsJ
gene_biotype: protein_coding
description:
  30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.


ensembl_gene_id: BSONL12_21989
symbol: rplC
gene_biotype: protein_coding
description:
  50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.


ensembl_gene_id: BSONL12_21999
symbol: rplW
gene_biotype: protein_coding
description:
  50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.


ensembl_gene_id: BSONL12_22004
symbol: rplB
gene_biotype: protein_coding
description:
  50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.


ensembl_gene_id: BSONL12_22009
symbol: rpsS
gene_biotype: protein_coding
description:
  30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.


ensembl_gene_id: BSONL12_22014
symbol: rplV
gene_biotype: protein_coding
description:
  50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.


ensembl_gene_id: BSONL12_22019
symbol: rpsC
gene_biotype: protein_coding
description:
  30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.


ensembl_gene_id: BSONL12_22024
symbol: rplP
gene_biotype: protein_coding
description:
  50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.


ensembl_gene_id: BSONL12_22034
symbol: rpsQ
gene_biotype: protein_coding
description:
  30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.


ensembl_gene_id: BSONL12_22039
symbol: rplN
gene_biotype: protein_coding
description:
  50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.


ensembl_gene_id: BSONL12_22044
symbol: rplX
gene_biotype: protein_coding
description:
  50S ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.


ensembl_gene_id: BSONL12_22049
symbol: rplE
gene_biotype: protein_coding
description:
  50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.


ensembl_gene_id: BSONL12_22059
symbol: rpsH
gene_biotype: protein_coding
description:
  30S ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.


ensembl_gene_id: BSONL12_22064
symbol: rplF
gene_biotype: protein_coding
description:
  50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.


ensembl_gene_id: BSONL12_22069
symbol: rplR
gene_biotype: protein_coding
description:
  50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.


ensembl_gene_id: BSONL12_22074
symbol: rpsE
gene_biotype: protein_coding
description:
  30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.


ensembl_gene_id: BSONL12_22084
symbol: rplO
gene_biotype: protein_coding
description:
  50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.


ensembl_gene_id: BSONL12_22089
symbol: secY
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.


ensembl_gene_id: BSONL12_22094
symbol: adk
gene_biotype: protein_coding
description:
  Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.


ensembl_gene_id: BSONL12_22109
symbol: infA
gene_biotype: protein_coding
description:
  Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.


ensembl_gene_id: BSONL12_22119
symbol: rpsM
gene_biotype: protein_coding
description:
  30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.


ensembl_gene_id: BSONL12_22124
symbol: rpsK
gene_biotype: protein_coding
description:
  30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.


ensembl_gene_id: BSONL12_22129
symbol: rpoA
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: BSONL12_22139
symbol: cbiO
gene_biotype: protein_coding
description:
  Cobalt transporter ATP-binding subunit; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.


ensembl_gene_id: BSONL12_22149
symbol: ecfT
gene_biotype: protein_coding
description:
  ABC transporter permease YbaF; Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.


ensembl_gene_id: BSONL12_22154
symbol: truA
gene_biotype: protein_coding
description:
  tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.


ensembl_gene_id: BSONL12_22159
symbol: rplM
gene_biotype: protein_coding
description:
  50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.


ensembl_gene_id: BSONL12_22174
symbol: EME72462.1
gene_biotype: protein_coding
description:
  S8A family lantibiotic epidermin serine protease; COG1404 Subtilisin-like serine proteases; Belongs to the peptidase S8 family.


ensembl_gene_id: BSONL12_22224
symbol: EME72472.1
gene_biotype: protein_coding
description:
  Accessory gene regulator B; COG4512 Membrane protein putatively involved in post-translational modification of the autoinducing quorum-sensing peptide.


ensembl_gene_id: BSONL12_22249
symbol: EME72477.1
gene_biotype: protein_coding
description:
  Nucleotide-binding protein SalA; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.


ensembl_gene_id: BSONL12_22259
symbol: EME72479.1
gene_biotype: protein_coding
description:
  KinB signaling pathway activation protein; Involved in the activation of the KinB signaling pathway of sporulation.


ensembl_gene_id: BSONL12_22289
symbol: tmk
gene_biotype: protein_coding
description:
  Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.


ensembl_gene_id: BSONL12_22314
symbol: EME72343.1
gene_biotype: protein_coding
description:
  DNA replication initiation control protein YabA; Involved in initiation control of chromosome replication. Belongs to the YabA family.


ensembl_gene_id: BSONL12_22329
symbol: rsmI
gene_biotype: protein_coding
description:
  Methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.


ensembl_gene_id: BSONL12_22339
symbol: metG
gene_biotype: protein_coding
description:
  methionyl-tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 2B subfamily.


ensembl_gene_id: BSONL12_22354
symbol: rnmV
gene_biotype: protein_coding
description:
  Ribonuclease M5; Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step.


ensembl_gene_id: BSONL12_22359
symbol: ksgA
gene_biotype: protein_coding
description:
  16S ribosomal RNA methyltransferase KsgA/Dim1 family protein; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.


ensembl_gene_id: BSONL12_22379
symbol: ipk
gene_biotype: protein_coding
description:
  4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.


ensembl_gene_id: BSONL12_22384
symbol: EME72357.1
gene_biotype: protein_coding
description:
  Pur operon repressor; COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins.


ensembl_gene_id: BSONL12_22394
symbol: spoVG
gene_biotype: protein_coding
description:
  Regulatory protein SpoVG; Essential for sporulation. Interferes with or is a negative regulator of the pathway leading to asymmetric septation.


ensembl_gene_id: BSONL12_22404
symbol: glmU
gene_biotype: protein_coding
description:
  Glucosamine-1-phosphate N-acetyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain.


ensembl_gene_id: BSONL12_22409
symbol: prs
gene_biotype: protein_coding
description:
  Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.


ensembl_gene_id: BSONL12_22414
symbol: rplY
gene_biotype: protein_coding
description:
  50S ribosomal protein L25/general stress protein Ctc; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.


ensembl_gene_id: BSONL12_22419
symbol: pth
gene_biotype: protein_coding
description:
  peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.


ensembl_gene_id: BSONL12_22429
symbol: mfd
gene_biotype: protein_coding
description:
  Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.


ensembl_gene_id: BSONL12_22444
symbol: EME72369.1
gene_biotype: protein_coding
description:
  Nucleotide pyrophosphohydrolase YabN; COG3956 Protein containing tetrapyrrole methyltransferase domain and MazG-like (predicted pyrophosphatase) domain.


ensembl_gene_id: BSONL12_22449
symbol: EME72370.1
gene_biotype: protein_coding
description:
  Ribosomal RNA binding protein; COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog); heat shock protein.


ensembl_gene_id: BSONL12_22479
symbol: EME72376.1
gene_biotype: protein_coding
description:
  Protein YabS; COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain.


ensembl_gene_id: BSONL12_22489
symbol: tilS
gene_biotype: protein_coding
description:
  tRNA(Ile)-lysidine synthase TilS; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.


ensembl_gene_id: BSONL12_22494
symbol: HprT
gene_biotype: protein_coding
description:
  COG0634 Hypoxanthine-guanine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.


ensembl_gene_id: BSONL12_22499
symbol: ftsH
gene_biotype: protein_coding
description:
  ATP-dependent zinc metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family.  In the central section; belongs to the AAA ATPase family.


ensembl_gene_id: BSONL12_22504
symbol: coaX
gene_biotype: protein_coding
description:
  Pantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.


ensembl_gene_id: BSONL12_22509
symbol: hslO
gene_biotype: protein_coding
description:
  Hsp33-like chaperonin; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress.


ensembl_gene_id: BSONL12_22539
symbol: IlvE
gene_biotype: protein_coding
description:
  4-amino-4-deoxychorismate lyase; COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase.


ensembl_gene_id: BSONL12_22544
symbol: FolP
gene_biotype: protein_coding
description:
  Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives.


ensembl_gene_id: BSONL12_22549
symbol: FolB
gene_biotype: protein_coding
description:
  Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.


ensembl_gene_id: BSONL12_22554
symbol: FolK
gene_biotype: protein_coding
description:
  2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase; COG0801 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase.


ensembl_gene_id: BSONL12_22564
symbol: DusB
gene_biotype: protein_coding
description:
  Dihydrouridine synthase protein YacF; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.


ensembl_gene_id: BSONL12_22583
symbol: guaB
gene_biotype: protein_coding
description:
  Inosine 5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.


ensembl_gene_id: BSONL12_22593
symbol: pdxS
gene_biotype: protein_coding
description:
  Pyridoxal biosynthesis lyase PdxS; Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5- phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively. Belongs to the PdxS/SNZ family.


ensembl_gene_id: BSONL12_22598
symbol: pdxT
gene_biotype: protein_coding
description:
  Glutamine amidotransferase subunit PdxT; Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS.


ensembl_gene_id: BSONL12_22603
symbol: serS
gene_biotype: protein_coding
description:
  seryl-tRNA ligase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).


ensembl_gene_id: BSONL12_22623
symbol: EME72323.1
gene_biotype: protein_coding
description:
  Cell proliferation coordinating protein; COG0542 ATPases with chaperone activity, ATP-binding subunit.


ensembl_gene_id: BSONL12_22648
symbol: tadA
gene_biotype: protein_coding
description:
  Cytidine/deoxycytidylate deaminase, zinc-binding region YaaJ; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: BSONL12_22653
symbol: dnaX
gene_biotype: protein_coding
description:
  DNA polymerase III subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: BSONL12_22658
symbol: EME72330.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.


ensembl_gene_id: BSONL12_22663
symbol: recR
gene_biotype: protein_coding
description:
  Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.


ensembl_gene_id: BSONL12_22835
symbol: EME72183.1
gene_biotype: protein_coding
description:
  Aluminum resistance protein; COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance.


ensembl_gene_id: BSONL12_22840
symbol: hflX
gene_biotype: protein_coding
description:
  GTP-binding protein YnbA; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.


ensembl_gene_id: BSONL12_22850
symbol: EME72186.1
gene_biotype: protein_coding
description:
  Resolvase domain-containing protein; COG1961 Site-specific recombinases, DNA invertase Pin homologs.


ensembl_gene_id: BSONL12_22980
symbol: EME72212.1
gene_biotype: protein_coding
description:
  Deoxyuridine 5'-triphosphate pyrophosphatase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA.


ensembl_gene_id: BSONL12_23075
symbol: EME72231.1
gene_biotype: protein_coding
description:
  Type II DNA modification enzyme; COG0863 DNA modification methylase; Belongs to the N(4)/N(6)-methyltransferase family.


ensembl_gene_id: BSONL12_23490
symbol: EME72151.1
gene_biotype: protein_coding
description:
  Amino acid adenylation domain protein; COG1020 Non-ribosomal peptide synthetase modules and related proteins.


ensembl_gene_id: BSONL12_23515
symbol: EME72150.1
gene_biotype: protein_coding
description:
  Amino acid adenylation protein; COG1020 Non-ribosomal peptide synthetase modules and related proteins.


ensembl_gene_id: BSONL12_23540
symbol: uppP
gene_biotype: protein_coding
description:
  Undecaprenyl pyrophosphate phosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.


ensembl_gene_id: BSONL12_23660
symbol: pcp
gene_biotype: protein_coding
description:
  Pyrrolidone-carboxylate peptidase; Removes 5-oxoproline from various penultimate amino acid residues except L-proline; Belongs to the peptidase C15 family.


ensembl_gene_id: BSONL12_23712
symbol: EME72089.1
gene_biotype: protein_coding
description:
  Integrase/recombinase; COG4974 Site-specific recombinase XerD; Belongs to the 'phage' integrase family.


