# geneInfo

ensembl_gene_id: SAMN05192588_0008
symbol: prfC
gene_biotype: protein_coding
description:
  Bacterial peptide chain release factor 3 (bRF-3); Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.


ensembl_gene_id: SAMN05192588_0018
symbol: fabH
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] synthase-3; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.


ensembl_gene_id: SAMN05192588_0022
symbol: recR
gene_biotype: protein_coding
description:
  DNA replication and repair protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.


ensembl_gene_id: SAMN05192588_0045
symbol: queE
gene_biotype: protein_coding
description:
  Organic radical activating enzyme; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds.


ensembl_gene_id: SAMN05192588_0047
symbol: gyrB
gene_biotype: protein_coding
description:
  DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: SAMN05192588_0049
symbol: mdh
gene_biotype: protein_coding
description:
  Malate dehydrogenase (NAD); Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.


ensembl_gene_id: SAMN05192588_0050
symbol: secD
gene_biotype: protein_coding
description:
  SecD/SecF fusion protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.


ensembl_gene_id: SAMN05192588_0051
symbol: lgt
gene_biotype: protein_coding
description:
  Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.


ensembl_gene_id: SAMN05192588_0052
symbol: SCX87711.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.


ensembl_gene_id: SAMN05192588_0058
symbol: proS
gene_biotype: protein_coding
description:
  prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro).


ensembl_gene_id: SAMN05192588_0062
symbol: rho
gene_biotype: protein_coding
description:
  Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.


ensembl_gene_id: SAMN05192588_0067
symbol: truA
gene_biotype: protein_coding
description:
  tRNA pseudouridine38-40 synthase; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.


ensembl_gene_id: SAMN05192588_0071
symbol: dacA
gene_biotype: protein_coding
description:
  TIGR00159 family protein; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria.


ensembl_gene_id: SAMN05192588_0072
symbol: SCX88079.1
gene_biotype: protein_coding
description:
  Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives.


ensembl_gene_id: SAMN05192588_0078
symbol: SCX88191.1
gene_biotype: protein_coding
description:
  23S rRNA (adenine1618-N6)-methyltransferase; Specifically methylates the adenine in position 1618 of 23S rRNA.


ensembl_gene_id: SAMN05192588_0112
symbol: folD
gene_biotype: protein_coding
description:
  5,10-methylenetetrahydrofolate dehydrogenase (NADP+); Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.


ensembl_gene_id: SAMN05192588_0114
symbol: ffh
gene_biotype: protein_coding
description:
  Signal recognition particle subunit FFH/SRP54 (srp54); Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily.


ensembl_gene_id: SAMN05192588_0130
symbol: glgE
gene_biotype: protein_coding
description:
  Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB.


ensembl_gene_id: SAMN05192588_0132
symbol: glgB
gene_biotype: protein_coding
description:
  1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.


ensembl_gene_id: SAMN05192588_0141
symbol: pepT
gene_biotype: protein_coding
description:
  Tripeptide aminopeptidase; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family.


ensembl_gene_id: SAMN05192588_0143
symbol: SCX89410.1
gene_biotype: protein_coding
description:
  tRNA nucleotidyltransferase (CCA-adding enzyme); Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.


ensembl_gene_id: SAMN05192588_0151
symbol: SCX89589.1
gene_biotype: protein_coding
description:
  2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase; Belongs to the transferase hexapeptide repeat family.


ensembl_gene_id: SAMN05192588_0152
symbol: SCX89611.1
gene_biotype: protein_coding
description:
  Putative holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.


ensembl_gene_id: SAMN05192588_0153
symbol: def
gene_biotype: protein_coding
description:
  Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.


ensembl_gene_id: SAMN05192588_0158
symbol: SCX89732.1
gene_biotype: protein_coding
description:
  23S rRNA m(5)U-1939 methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.


ensembl_gene_id: SAMN05192588_0159
symbol: SCX89747.1
gene_biotype: protein_coding
description:
  Ornithine--oxo-acid transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: SAMN05192588_0174
symbol: xerC
gene_biotype: protein_coding
description:
  Integrase/recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.


ensembl_gene_id: SAMN05192588_0177
symbol: aroQ
gene_biotype: protein_coding
description:
  3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.


ensembl_gene_id: SAMN05192588_0181
symbol: pyrD
gene_biotype: protein_coding
description:
  Dihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.


ensembl_gene_id: SAMN05192588_0194
symbol: SCX90480.1
gene_biotype: protein_coding
description:
  2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.


ensembl_gene_id: SAMN05192588_0210
symbol: metZ
gene_biotype: protein_coding
description:
  O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide.


ensembl_gene_id: SAMN05192588_0222
symbol: SCX91051.1
gene_biotype: protein_coding
description:
  Deoxyribodipyrimidine photo-lyase family protein (cryptochrome); Belongs to the DNA photolyase family.


ensembl_gene_id: SAMN05192588_0226
symbol: lipB
gene_biotype: protein_coding
description:
  Lipoyl(octanoyl) transferase; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate.


ensembl_gene_id: SAMN05192588_0247
symbol: SCX91588.1
gene_biotype: protein_coding
description:
  Oxygen-dependent protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.


ensembl_gene_id: SAMN05192588_0248
symbol: guaB
gene_biotype: protein_coding
description:
  IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.


ensembl_gene_id: SAMN05192588_0255
symbol: ftsY
gene_biotype: protein_coding
description:
  Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC).


ensembl_gene_id: SAMN05192588_0259
symbol: rimO
gene_biotype: protein_coding
description:
  SSU ribosomal protein S12P methylthiotransferase; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.


ensembl_gene_id: SAMN05192588_0261
symbol: macB
gene_biotype: protein_coding
description:
  Putative ABC transport system ATP-binding protein; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.


ensembl_gene_id: SAMN05192588_0305
symbol: lnt
gene_biotype: protein_coding
description:
  Apolipoprotein N-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily.


ensembl_gene_id: SAMN05192588_0307
symbol: SCX92973.1
gene_biotype: protein_coding
description:
  CDP-diacylglycerol---serine O-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: SAMN05192588_0316
symbol: secA
gene_biotype: protein_coding
description:
  Protein translocase subunit secA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane.


ensembl_gene_id: SAMN05192588_0320
symbol: SCX93253.1
gene_biotype: protein_coding
description:
  Alkylhydroperoxidase AhpD family core domain-containing protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.


ensembl_gene_id: SAMN05192588_0321
symbol: tatC
gene_biotype: protein_coding
description:
  Sec-independent protein translocase TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes.


ensembl_gene_id: SAMN05192588_0328
symbol: tpiA
gene_biotype: protein_coding
description:
  Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.


ensembl_gene_id: SAMN05192588_0337
symbol: SCX93633.1
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier protein] reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: SAMN05192588_0345
symbol: tilS
gene_biotype: protein_coding
description:
  tRNA(Ile)-lysidine synthase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.


ensembl_gene_id: SAMN05192588_0350
symbol: gmd
gene_biotype: protein_coding
description:
  GDPmannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.


ensembl_gene_id: SAMN05192588_0351
symbol: fcl
gene_biotype: protein_coding
description:
  GDP-L-fucose synthase; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction.


ensembl_gene_id: SAMN05192588_0353
symbol: SCX93951.1
gene_biotype: protein_coding
description:
  UDP-N-acetyl-D-galactosamine dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.


ensembl_gene_id: SAMN05192588_0354
symbol: SCX93975.1
gene_biotype: protein_coding
description:
  dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.


ensembl_gene_id: SAMN05192588_0355
symbol: SCX93988.1
gene_biotype: protein_coding
description:
  dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.


ensembl_gene_id: SAMN05192588_0356
symbol: SCX94014.1
gene_biotype: protein_coding
description:
  dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.


ensembl_gene_id: SAMN05192588_0357
symbol: SCX94032.1
gene_biotype: protein_coding
description:
  Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.


ensembl_gene_id: SAMN05192588_0359
symbol: SCX94104.1
gene_biotype: protein_coding
description:
  UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.


ensembl_gene_id: SAMN05192588_0386
symbol: SCX94771.1
gene_biotype: protein_coding
description:
  NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC.


ensembl_gene_id: SAMN05192588_0391
symbol: SCX94920.1
gene_biotype: protein_coding
description:
  Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: SAMN05192588_0395
symbol: murQ
gene_biotype: protein_coding
description:
  N-acetylmuramic acid 6-phosphate etherase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate.


ensembl_gene_id: SAMN05192588_0396
symbol: ribB
gene_biotype: protein_coding
description:
  3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.


ensembl_gene_id: SAMN05192588_0401
symbol: SCX95132.1
gene_biotype: protein_coding
description:
  Thiol peroxidase (atypical 2-Cys peroxiredoxin); Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.


ensembl_gene_id: SAMN05192588_0402
symbol: SCX95148.1
gene_biotype: protein_coding
description:
  LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: SAMN05192588_0404
symbol: menA
gene_biotype: protein_coding
description:
  1,4-dihydroxy-2-naphthoate prenyltransferase; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily.


ensembl_gene_id: SAMN05192588_0413
symbol: SCX95396.1
gene_biotype: protein_coding
description:
  XTP/dITP diphosphohydrolase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.


ensembl_gene_id: SAMN05192588_0417
symbol: menD
gene_biotype: protein_coding
description:
  2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Belongs to the TPP enzyme family. MenD subfamily.


ensembl_gene_id: SAMN05192588_0426
symbol: menB
gene_biotype: protein_coding
description:
  1,4-Dihydroxy-2-naphthoyl-CoA synthase; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA); Belongs to the enoyl-CoA hydratase/isomerase family. MenB subfamily.


ensembl_gene_id: SAMN05192588_0431
symbol: nnrE
gene_biotype: protein_coding
description:
  NAD(P)H-hydrate epimerase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration.  Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of bot [...]


ensembl_gene_id: SAMN05192588_0433
symbol: gyrA
gene_biotype: protein_coding
description:
  DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: SAMN05192588_0441
symbol: pdxH
gene_biotype: protein_coding
description:
  Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP).


ensembl_gene_id: SAMN05192588_0443
symbol: ppk
gene_biotype: protein_coding
description:
  Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.


ensembl_gene_id: SAMN05192588_0446
symbol: dnaX
gene_biotype: protein_coding
description:
  DNA polymerase-3 subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: SAMN05192588_0454
symbol: kdsB
gene_biotype: protein_coding
description:
  3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase); Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria.


ensembl_gene_id: SAMN05192588_0458
symbol: SCX96309.1
gene_biotype: protein_coding
description:
  Cardiolipin synthase; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol.


ensembl_gene_id: SAMN05192588_0467
symbol: icmF
gene_biotype: protein_coding
description:
  methylmalonyl-CoA mutase; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly.


ensembl_gene_id: SAMN05192588_0478
symbol: crcB
gene_biotype: protein_coding
description:
  Camphor resistance protein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.


ensembl_gene_id: SAMN05192588_0517
symbol: proC
gene_biotype: protein_coding
description:
  Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.


ensembl_gene_id: SAMN05192588_0522
symbol: SCX97444.1
gene_biotype: protein_coding
description:
  RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: SAMN05192588_0531
symbol: purE
gene_biotype: protein_coding
description:
  5-(carboxyamino)imidazole ribonucleotide mutase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).


ensembl_gene_id: SAMN05192588_0555
symbol: SCX98039.1
gene_biotype: protein_coding
description:
  NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Non-canonical start codon; manually curated.


ensembl_gene_id: SAMN05192588_0557
symbol: selO
gene_biotype: protein_coding
description:
  Uncharacterized conserved protein YdiU, UPF0061 family; Catalyzes the transfer of adenosine 5'-monophosphate (AMP) to Ser, Thr or Tyr residues of target proteins (AMPylation). Belongs to the SELO family.


ensembl_gene_id: SAMN05192588_0571
symbol: SCX98340.1
gene_biotype: protein_coding
description:
  UPF0271 protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.


ensembl_gene_id: SAMN05192588_0581
symbol: SCX98561.1
gene_biotype: protein_coding
description:
  C-terminal processing protease CtpA/Prc, contains a PDZ domain; Degrades oligopeptides; Belongs to the peptidase S41B family.


ensembl_gene_id: SAMN05192588_0594
symbol: SCX98802.1
gene_biotype: protein_coding
description:
  Molybdopterin molybdochelatase; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.


ensembl_gene_id: SAMN05192588_0595
symbol: SCX98825.1
gene_biotype: protein_coding
description:
  Cyclic pyranopterin monophosphate synthase subunit MoaA; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.


ensembl_gene_id: SAMN05192588_0701
symbol: mnmE
gene_biotype: protein_coding
description:
  tRNA modification GTPase trmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.


ensembl_gene_id: SAMN05192588_0709
symbol: rpsR
gene_biotype: protein_coding
description:
  SSU ribosomal protein S18P; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.


ensembl_gene_id: SAMN05192588_0722
symbol: SCY01099.1
gene_biotype: protein_coding
description:
  DNA-binding protein HU-beta; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.


ensembl_gene_id: SAMN05192588_0723
symbol: fmt
gene_biotype: protein_coding
description:
  methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.


ensembl_gene_id: SAMN05192588_0728
symbol: murA
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.


ensembl_gene_id: SAMN05192588_0730
symbol: SCY01277.1
gene_biotype: protein_coding
description:
  23S rRNA pseudouridine2457 synthase; Manually curated; Belongs to the pseudouridine synthase RsuA family.


ensembl_gene_id: SAMN05192588_0769
symbol: dapB
gene_biotype: protein_coding
description:
  Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.


ensembl_gene_id: SAMN05192588_0778
symbol: SCY02370.1
gene_biotype: protein_coding
description:
  NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: SAMN05192588_0789
symbol: lysA
gene_biotype: protein_coding
description:
  Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.


ensembl_gene_id: SAMN05192588_0791
symbol: sucC
gene_biotype: protein_coding
description:
  succinyl-CoA synthetase beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.


ensembl_gene_id: SAMN05192588_0793
symbol: SCY02684.1
gene_biotype: protein_coding
description:
  3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).


ensembl_gene_id: SAMN05192588_0802
symbol: lpxD
gene_biotype: protein_coding
description:
  UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily.


ensembl_gene_id: SAMN05192588_0803
symbol: fabZ
gene_biotype: protein_coding
description:
  3-hydroxyacyl-[acyl-carrier-protein] dehydratase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the thioester dehydratase family. FabZ subfamily.


ensembl_gene_id: SAMN05192588_0804
symbol: SCY02934.1
gene_biotype: protein_coding
description:
  acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: SAMN05192588_0805
symbol: efp
gene_biotype: protein_coding
description:
  Translation elongation factor P (EF-P); Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.


ensembl_gene_id: SAMN05192588_0808
symbol: sucD
gene_biotype: protein_coding
description:
  succinyl-CoA synthetase alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.


ensembl_gene_id: SAMN05192588_0810
symbol: SCY03074.1
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: SAMN05192588_0816
symbol: SCY03218.1
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS2; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity. Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.


ensembl_gene_id: SAMN05192588_0817
symbol: ung
gene_biotype: protein_coding
description:
  Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.


ensembl_gene_id: SAMN05192588_0825
symbol: ndk
gene_biotype: protein_coding
description:
  Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.


ensembl_gene_id: SAMN05192588_0828
symbol: SCY03487.1
gene_biotype: protein_coding
description:
  Septum formation protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.


ensembl_gene_id: SAMN05192588_0834
symbol: fumC
gene_biotype: protein_coding
description:
  Fumarase, class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.


ensembl_gene_id: SAMN05192588_0851
symbol: argC
gene_biotype: protein_coding
description:
  N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.


ensembl_gene_id: SAMN05192588_0853
symbol: SCY04048.1
gene_biotype: protein_coding
description:
  N-succinyl-L-ornithine transcarbamylase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.


ensembl_gene_id: SAMN05192588_0855
symbol: argB
gene_biotype: protein_coding
description:
  N-acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.


ensembl_gene_id: SAMN05192588_0890
symbol: SCY04851.1
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate carboxylase, type 1; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle.


ensembl_gene_id: SAMN05192588_0892
symbol: SCY04889.1
gene_biotype: protein_coding
description:
  3-oxoacyl-(acyl-carrier-protein) synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.


ensembl_gene_id: SAMN05192588_0929
symbol: SCY05795.1
gene_biotype: protein_coding
description:
  Na+/H+-dicarboxylate symporter; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: SAMN05192588_0930
symbol: aroC
gene_biotype: protein_coding
description:
  Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.


ensembl_gene_id: SAMN05192588_0938
symbol: SCY06010.1
gene_biotype: protein_coding
description:
  tRNA-U20a,U20b-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.


ensembl_gene_id: SAMN05192588_0940
symbol: SCY06045.1
gene_biotype: protein_coding
description:
  16S rRNA (cytosine967-C5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.


ensembl_gene_id: SAMN05192588_0946
symbol: purL
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate.


ensembl_gene_id: SAMN05192588_0960
symbol: lon
gene_biotype: protein_coding
description:
  ATP-dependent Lon protease; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.


ensembl_gene_id: SAMN05192588_0965
symbol: SCY06567.1
gene_biotype: protein_coding
description:
  CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: SAMN05192588_0969
symbol: clpB
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease ATP-binding subunit ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.


ensembl_gene_id: SAMN05192588_0994
symbol: SCY07182.1
gene_biotype: protein_coding
description:
  Conserved repeat domain-containing protein/gliding motility-associated C-terminal domain-containing protein.


ensembl_gene_id: SAMN05192588_1004
symbol: SCY07383.1
gene_biotype: protein_coding
description:
  Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA.


ensembl_gene_id: SAMN05192588_1009
symbol: SCY07483.1
gene_biotype: protein_coding
description:
  DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: SAMN05192588_1017
symbol: katG
gene_biotype: protein_coding
description:
  Catalase-peroxidase; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily.


ensembl_gene_id: SAMN05192588_1020
symbol: SCY07694.1
gene_biotype: protein_coding
description:
  GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.


ensembl_gene_id: SAMN05192588_1022
symbol: purA
gene_biotype: protein_coding
description:
  Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.


ensembl_gene_id: SAMN05192588_1030
symbol: SCY07897.1
gene_biotype: protein_coding
description:
  Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: SAMN05192588_1031
symbol: pfkA
gene_biotype: protein_coding
description:
  6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.


ensembl_gene_id: SAMN05192588_1074
symbol: SCY08763.1
gene_biotype: protein_coding
description:
  DNA polymerase-3 subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...]


ensembl_gene_id: SAMN05192588_1081
symbol: mscL
gene_biotype: protein_coding
description:
  Large conductance mechanosensitive channel; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell.


ensembl_gene_id: SAMN05192588_1099
symbol: ychF
gene_biotype: protein_coding
description:
  Hypothetical protein; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.


ensembl_gene_id: SAMN05192588_1119
symbol: smpB
gene_biotype: protein_coding
description:
  SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...]


ensembl_gene_id: SAMN05192588_1130
symbol: SCY09668.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.


ensembl_gene_id: SAMN05192588_1134
symbol: mltG
gene_biotype: protein_coding
description:
  UPF0755 protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation.


ensembl_gene_id: SAMN05192588_1136
symbol: dapF
gene_biotype: protein_coding
description:
  Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.


ensembl_gene_id: SAMN05192588_1143
symbol: priA
gene_biotype: protein_coding
description:
  Replication restart DNA helicase PriA; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.


ensembl_gene_id: SAMN05192588_1148
symbol: rlmH
gene_biotype: protein_coding
description:
  23S rRNA (pseudouridine1915-N3)-methyltransferase; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.


ensembl_gene_id: SAMN05192588_1163
symbol: serC
gene_biotype: protein_coding
description:
  Phosphoserine aminotransferase apoenzyme; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily.


ensembl_gene_id: SAMN05192588_1166
symbol: SCY10333.1
gene_biotype: protein_coding
description:
  D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: SAMN05192588_1176
symbol: kduI
gene_biotype: protein_coding
description:
  4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family.


ensembl_gene_id: SAMN05192588_1186
symbol: msrA
gene_biotype: protein_coding
description:
  Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.


ensembl_gene_id: SAMN05192588_1188
symbol: lolD
gene_biotype: protein_coding
description:
  Lipoprotein-releasing system ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.


ensembl_gene_id: SAMN05192588_1199
symbol: nth
gene_biotype: protein_coding
description:
  Endonuclease-3; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.


ensembl_gene_id: SAMN05192588_1202
symbol: SCY11156.1
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.


ensembl_gene_id: SAMN05192588_1203
symbol: corA
gene_biotype: protein_coding
description:
  Magnesium transporter; Mediates influx of magnesium ions. Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.


ensembl_gene_id: SAMN05192588_1208
symbol: SCY11282.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.


ensembl_gene_id: SAMN05192588_1210
symbol: prfB
gene_biotype: protein_coding
description:
  Bacterial peptide chain release factor 2 (bRF-2); Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.


ensembl_gene_id: SAMN05192588_1227
symbol: SCY11713.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: SAMN05192588_1228
symbol: uvrB
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate  [...]


ensembl_gene_id: SAMN05192588_1233
symbol: panB
gene_biotype: protein_coding
description:
  Ketopantoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family.


ensembl_gene_id: SAMN05192588_1243
symbol: SCY12039.1
gene_biotype: protein_coding
description:
  Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: SAMN05192588_1256
symbol: rnz
gene_biotype: protein_coding
description:
  RNAse Z; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family.


ensembl_gene_id: SAMN05192588_1258
symbol: pyrB
gene_biotype: protein_coding
description:
  Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.


ensembl_gene_id: SAMN05192588_1269
symbol: SCY12490.1
gene_biotype: protein_coding
description:
  Peptidylprolyl isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.


ensembl_gene_id: SAMN05192588_1272
symbol: pheT
gene_biotype: protein_coding
description:
  phenylalanyl-tRNA synthetase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.


ensembl_gene_id: SAMN05192588_1276
symbol: ribH
gene_biotype: protein_coding
description:
  6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.


ensembl_gene_id: SAMN05192588_1278
symbol: recF
gene_biotype: protein_coding
description:
  DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family.


ensembl_gene_id: SAMN05192588_1282
symbol: tsaD
gene_biotype: protein_coding
description:
  O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.


ensembl_gene_id: SAMN05192588_1283
symbol: SCY12803.1
gene_biotype: protein_coding
description:
  16S rRNA (uracil1498-N3)-methyltransferase; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.


ensembl_gene_id: SAMN05192588_1298
symbol: ppa
gene_biotype: protein_coding
description:
  Inorganic pyrophosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.


ensembl_gene_id: SAMN05192588_1306
symbol: miaA
gene_biotype: protein_coding
description:
  tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.


ensembl_gene_id: SAMN05192588_1308
symbol: SCY13313.1
gene_biotype: protein_coding
description:
  Histidine kinase domain-containing protein; Hypothetical protein/two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR.


ensembl_gene_id: SAMN05192588_1309
symbol: coaE
gene_biotype: protein_coding
description:
  dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.


ensembl_gene_id: SAMN05192588_1311
symbol: SCY13371.1
gene_biotype: protein_coding
description:
  Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase.


ensembl_gene_id: SAMN05192588_1315
symbol: SCY13476.1
gene_biotype: protein_coding
description:
  Phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.


ensembl_gene_id: SAMN05192588_1316
symbol: SCY13494.1
gene_biotype: protein_coding
description:
  RNA polymerase Rpb6; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.


ensembl_gene_id: SAMN05192588_1318
symbol: dapA
gene_biotype: protein_coding
description:
  4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).


ensembl_gene_id: SAMN05192588_1323
symbol: ligA
gene_biotype: protein_coding
description:
  DNA ligase (NAD+); DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA.


ensembl_gene_id: SAMN05192588_1328
symbol: SCY13705.1
gene_biotype: protein_coding
description:
  Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.


ensembl_gene_id: SAMN05192588_1333
symbol: dnaA
gene_biotype: protein_coding
description:
  Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.


ensembl_gene_id: SAMN05192588_1334
symbol: SCY13811.1
gene_biotype: protein_coding
description:
  Protein-tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.


ensembl_gene_id: SAMN05192588_1372
symbol: mutL
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.


ensembl_gene_id: SAMN05192588_1376
symbol: tal
gene_biotype: protein_coding
description:
  Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.


ensembl_gene_id: SAMN05192588_1390
symbol: prfA
gene_biotype: protein_coding
description:
  Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.


ensembl_gene_id: SAMN05192588_1412
symbol: thrS
gene_biotype: protein_coding
description:
  threonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr).


ensembl_gene_id: SAMN05192588_1413
symbol: SCY15470.1
gene_biotype: protein_coding
description:
  Bacterial translation initiation factor 3 (bIF-3); Non-canonical start codon; manually curated; Belongs to the IF-3 family.


ensembl_gene_id: SAMN05192588_1415
symbol: rplT
gene_biotype: protein_coding
description:
  LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.


ensembl_gene_id: SAMN05192588_1423
symbol: SCY15689.1
gene_biotype: protein_coding
description:
  Ribosomal large subunit pseudouridine synthase F; Belongs to the pseudouridine synthase RsuA family.


ensembl_gene_id: SAMN05192588_1425
symbol: recG
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.


ensembl_gene_id: SAMN05192588_1432
symbol: fabH-2
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.


ensembl_gene_id: SAMN05192588_1444
symbol: yidC
gene_biotype: protein_coding
description:
  Protein translocase subunit yidC; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins.


ensembl_gene_id: SAMN05192588_1445
symbol: pyrG
gene_biotype: protein_coding
description:
  CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.


ensembl_gene_id: SAMN05192588_1451
symbol: glyA
gene_biotype: protein_coding
description:
  Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.


ensembl_gene_id: SAMN05192588_1460
symbol: SCY16436.1
gene_biotype: protein_coding
description:
  DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains.


ensembl_gene_id: SAMN05192588_1466
symbol: dnaJ
gene_biotype: protein_coding
description:
  Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...]


ensembl_gene_id: SAMN05192588_1467
symbol: grpE
gene_biotype: protein_coding
description:
  Molecular chaperone GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP [...]


ensembl_gene_id: SAMN05192588_1477
symbol: alaS
gene_biotype: protein_coding
description:
  alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.


ensembl_gene_id: SAMN05192588_1486
symbol: SCY17054.1
gene_biotype: protein_coding
description:
  Hydrophobic/amphiphilic exporter-1, HAE1 family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: SAMN05192588_1487
symbol: SCY17083.1
gene_biotype: protein_coding
description:
  Membrane fusion protein, multidrug efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: SAMN05192588_1504
symbol: mnmA
gene_biotype: protein_coding
description:
  tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.


ensembl_gene_id: SAMN05192588_1509
symbol: trmD
gene_biotype: protein_coding
description:
  tRNA (Guanine37-N(1)-) methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.


ensembl_gene_id: SAMN05192588_1511
symbol: SCY17564.1
gene_biotype: protein_coding
description:
  LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.


ensembl_gene_id: SAMN05192588_1520
symbol: thrB
gene_biotype: protein_coding
description:
  Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily.


ensembl_gene_id: SAMN05192588_1524
symbol: apt
gene_biotype: protein_coding
description:
  Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.


ensembl_gene_id: SAMN05192588_1559
symbol: SCY18448.1
gene_biotype: protein_coding
description:
  Cu(I)/Ag(I) efflux system membrane protein CusA/SilA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: SAMN05192588_1569
symbol: SCY18663.1
gene_biotype: protein_coding
description:
  Membrane fusion protein, Cu(I)/Ag(I) efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: SAMN05192588_1576
symbol: SCY18812.1
gene_biotype: protein_coding
description:
  Membrane fusion protein, cobalt-zinc-cadmium efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: SAMN05192588_1577
symbol: SCY18834.1
gene_biotype: protein_coding
description:
  Cobalt-zinc-cadmium resistance protein CzcA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: SAMN05192588_1602
symbol: SCY19343.1
gene_biotype: protein_coding
description:
  Type I restriction enzyme, R subunit; Subunit R is required for both nuclease and ATPase activities, but not for modification.


ensembl_gene_id: SAMN05192588_1633
symbol: SCY20075.1
gene_biotype: protein_coding
description:
  Primary replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.


ensembl_gene_id: SAMN05192588_1634
symbol: accA
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase carboxyl transferase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.


ensembl_gene_id: SAMN05192588_1637
symbol: tgt
gene_biotype: protein_coding
description:
  tRNA-guanine transglycosylase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the [...]


ensembl_gene_id: SAMN05192588_1643
symbol: aroK
gene_biotype: protein_coding
description:
  Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.


ensembl_gene_id: SAMN05192588_1697
symbol: eno
gene_biotype: protein_coding
description:
  Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.


ensembl_gene_id: SAMN05192588_1700
symbol: rpoA
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: SAMN05192588_1701
symbol: rpsD
gene_biotype: protein_coding
description:
  SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.


ensembl_gene_id: SAMN05192588_1702
symbol: rpsK
gene_biotype: protein_coding
description:
  SSU ribosomal protein S11P; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.


ensembl_gene_id: SAMN05192588_1703
symbol: rpsM
gene_biotype: protein_coding
description:
  SSU ribosomal protein S13P; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.


ensembl_gene_id: SAMN05192588_1704
symbol: rpmJ
gene_biotype: protein_coding
description:
  LSU ribosomal protein L36P; Manually curated; Belongs to the bacterial ribosomal protein bL36 family.


ensembl_gene_id: SAMN05192588_1705
symbol: infA
gene_biotype: protein_coding
description:
  Bacterial translation initiation factor 1 (bIF-1); One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.


ensembl_gene_id: SAMN05192588_1706
symbol: secY
gene_biotype: protein_coding
description:
  Protein translocase subunit secY/sec61 alpha; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.


ensembl_gene_id: SAMN05192588_1707
symbol: rplO
gene_biotype: protein_coding
description:
  LSU ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.


ensembl_gene_id: SAMN05192588_1709
symbol: rpsE
gene_biotype: protein_coding
description:
  SSU ribosomal protein S5P; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.


ensembl_gene_id: SAMN05192588_1710
symbol: rplR
gene_biotype: protein_coding
description:
  LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.


ensembl_gene_id: SAMN05192588_1711
symbol: rplF
gene_biotype: protein_coding
description:
  LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.


ensembl_gene_id: SAMN05192588_1712
symbol: rpsH
gene_biotype: protein_coding
description:
  SSU ribosomal protein S8P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.


ensembl_gene_id: SAMN05192588_1713
symbol: rpsN
gene_biotype: protein_coding
description:
  SSU ribosomal protein S14P; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.


ensembl_gene_id: SAMN05192588_1714
symbol: rplE
gene_biotype: protein_coding
description:
  LSU ribosomal protein L5P; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.


ensembl_gene_id: SAMN05192588_1715
symbol: rplX
gene_biotype: protein_coding
description:
  LSU ribosomal protein L24P; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.


ensembl_gene_id: SAMN05192588_1716
symbol: rplN
gene_biotype: protein_coding
description:
  LSU ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.


ensembl_gene_id: SAMN05192588_1717
symbol: rpsQ
gene_biotype: protein_coding
description:
  SSU ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.


ensembl_gene_id: SAMN05192588_1719
symbol: rplP
gene_biotype: protein_coding
description:
  LSU ribosomal protein L16P; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.


ensembl_gene_id: SAMN05192588_1720
symbol: rpsC
gene_biotype: protein_coding
description:
  SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.


ensembl_gene_id: SAMN05192588_1721
symbol: rplV
gene_biotype: protein_coding
description:
  LSU ribosomal protein L22P; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.


ensembl_gene_id: SAMN05192588_1722
symbol: rpsS
gene_biotype: protein_coding
description:
  SSU ribosomal protein S19P; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.


ensembl_gene_id: SAMN05192588_1723
symbol: rplB
gene_biotype: protein_coding
description:
  LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.


ensembl_gene_id: SAMN05192588_1724
symbol: rplW
gene_biotype: protein_coding
description:
  LSU ribosomal protein L23P; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.


ensembl_gene_id: SAMN05192588_1726
symbol: rplC
gene_biotype: protein_coding
description:
  LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.


ensembl_gene_id: SAMN05192588_1727
symbol: rpsJ
gene_biotype: protein_coding
description:
  SSU ribosomal protein S10P; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.


ensembl_gene_id: SAMN05192588_1728
symbol: fusA
gene_biotype: protein_coding
description:
  Translation elongation factor 2 (EF-2/EF-G); Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. [...]


ensembl_gene_id: SAMN05192588_1729
symbol: rpsG
gene_biotype: protein_coding
description:
  SSU ribosomal protein S7P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.


ensembl_gene_id: SAMN05192588_1730
symbol: rpsL
gene_biotype: protein_coding
description:
  SSU ribosomal protein S12P; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.


ensembl_gene_id: SAMN05192588_1735
symbol: SCY22105.1
gene_biotype: protein_coding
description:
  23S rRNA (guanosine2251-2'-O)-methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: SAMN05192588_1742
symbol: SCY22232.1
gene_biotype: protein_coding
description:
  Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: SAMN05192588_1745
symbol: coaD
gene_biotype: protein_coding
description:
  Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.


ensembl_gene_id: SAMN05192588_1748
symbol: pyrE
gene_biotype: protein_coding
description:
  Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).


ensembl_gene_id: SAMN05192588_1751
symbol: rsfS
gene_biotype: protein_coding
description:
  Ribosome-associated protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.


ensembl_gene_id: SAMN05192588_1752
symbol: ftsH
gene_biotype: protein_coding
description:
  Cell division protease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family.  In the central section; belongs to the AAA ATPase family.


ensembl_gene_id: SAMN05192588_1757
symbol: valS
gene_biotype: protein_coding
description:
  valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.


ensembl_gene_id: SAMN05192588_1764
symbol: lipA
gene_biotype: protein_coding
description:
  Lipoic acid synthetase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.


ensembl_gene_id: SAMN05192588_1767
symbol: lpxK
gene_biotype: protein_coding
description:
  lipid-A-disaccharide kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).


ensembl_gene_id: SAMN05192588_1768
symbol: SCY22731.1
gene_biotype: protein_coding
description:
  Dinuclear metal center protein, YbgI/SA1388 family; Belongs to the GTP cyclohydrolase I type 2/NIF3 family.


ensembl_gene_id: SAMN05192588_1776
symbol: trpD
gene_biotype: protein_coding
description:
  Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).


ensembl_gene_id: SAMN05192588_1779
symbol: trpB
gene_biotype: protein_coding
description:
  Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.


ensembl_gene_id: SAMN05192588_1780
symbol: trpA
gene_biotype: protein_coding
description:
  Tryptophan synthase, alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.


ensembl_gene_id: SAMN05192588_1781
symbol: hisG
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Long subfamily.


ensembl_gene_id: SAMN05192588_1782
symbol: hisD
gene_biotype: protein_coding
description:
  Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.


ensembl_gene_id: SAMN05192588_1783
symbol: hisC
gene_biotype: protein_coding
description:
  Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.


ensembl_gene_id: SAMN05192588_1784
symbol: hisB
gene_biotype: protein_coding
description:
  Imidazoleglycerol-phosphate dehydratase; In the C-terminal section; belongs to the imidazoleglycerol-phosphate dehydratase family.


ensembl_gene_id: SAMN05192588_1785
symbol: hisH
gene_biotype: protein_coding
description:
  Glutamine amidotransferase; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.


ensembl_gene_id: SAMN05192588_1786
symbol: hisA
gene_biotype: protein_coding
description:
  1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase.


ensembl_gene_id: SAMN05192588_1787
symbol: hisF
gene_biotype: protein_coding
description:
  Cyclase; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.


ensembl_gene_id: SAMN05192588_1818
symbol: ftsZ
gene_biotype: protein_coding
description:
  Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.


ensembl_gene_id: SAMN05192588_1819
symbol: ftsA
gene_biotype: protein_coding
description:
  Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.


ensembl_gene_id: SAMN05192588_1822
symbol: murG
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine-N- acetylmuramylpentapeptide N-acetylglucosamine transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.


ensembl_gene_id: SAMN05192588_1824
symbol: murD
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.


ensembl_gene_id: SAMN05192588_1825
symbol: mraY
gene_biotype: protein_coding
description:
  Phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.


ensembl_gene_id: SAMN05192588_1826
symbol: murE
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily.


ensembl_gene_id: SAMN05192588_1829
symbol: rsmH
gene_biotype: protein_coding
description:
  16S rRNA (cytosine1402-N4)-methyltransferase; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.


ensembl_gene_id: SAMN05192588_1832
symbol: engB
gene_biotype: protein_coding
description:
  GTP-binding protein; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.


ensembl_gene_id: SAMN05192588_1837
symbol: SCY24252.1
gene_biotype: protein_coding
description:
  NAD+ synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source.


ensembl_gene_id: SAMN05192588_1839
symbol: dnaG
gene_biotype: protein_coding
description:
  DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Belongs to the DnaG primase family.


ensembl_gene_id: SAMN05192588_1844
symbol: era
gene_biotype: protein_coding
description:
  GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.


ensembl_gene_id: SAMN05192588_1856
symbol: SCY24667.1
gene_biotype: protein_coding
description:
  Multidrug efflux pump subunit AcrB; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: SAMN05192588_1866
symbol: topA
gene_biotype: protein_coding
description:
  DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]


ensembl_gene_id: SAMN05192588_1868
symbol: miaB
gene_biotype: protein_coding
description:
  tRNA-i(6)A37 thiotransferase enzyme MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.


ensembl_gene_id: SAMN05192588_1872
symbol: SCY25008.1
gene_biotype: protein_coding
description:
  Protein translocase subunit secG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.


ensembl_gene_id: SAMN05192588_1873
symbol: groS
gene_biotype: protein_coding
description:
  Chaperonin GroES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.


ensembl_gene_id: SAMN05192588_1874
symbol: groL
gene_biotype: protein_coding
description:
  Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.


ensembl_gene_id: SAMN05192588_1887
symbol: SCY25303.1
gene_biotype: protein_coding
description:
  anhydro-N-acetylmuramic acid kinase; Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the anhydro-N-acetylmuramic acid kinase family.


ensembl_gene_id: SAMN05192588_1888
symbol: SCY25325.1
gene_biotype: protein_coding
description:
  Glutamate dehydrogenase/leucine dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.


ensembl_gene_id: SAMN05192588_1903
symbol: kynU
gene_biotype: protein_coding
description:
  Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively.


ensembl_gene_id: SAMN05192588_1907
symbol: gpmI
gene_biotype: protein_coding
description:
  Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.


ensembl_gene_id: SAMN05192588_1911
symbol: map
gene_biotype: protein_coding
description:
  Methionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.


ensembl_gene_id: SAMN05192588_1913
symbol: SCY25767.1
gene_biotype: protein_coding
description:
  Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.


ensembl_gene_id: SAMN05192588_1919
symbol: nqrF
gene_biotype: protein_coding
description:
  Na+-transporting NADH:ubiquinone oxidoreductase subunit F; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. The first step is catalyzed by NqrF, which accepts electrons from NADH and reduces ubiquinone-1 to ubisemiquinone by a one-electron transfer pathway.


ensembl_gene_id: SAMN05192588_1920
symbol: nqrE
gene_biotype: protein_coding
description:
  Na+-transporting NADH:ubiquinone oxidoreductase subunit E; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol; Belongs to the NqrDE/RnfAE family.


ensembl_gene_id: SAMN05192588_1921
symbol: nqrD
gene_biotype: protein_coding
description:
  Na+-transporting NADH:ubiquinone oxidoreductase subunit D; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol; Belongs to the NqrDE/RnfAE family.


ensembl_gene_id: SAMN05192588_1922
symbol: nqrC
gene_biotype: protein_coding
description:
  Na+-transporting NADH:ubiquinone oxidoreductase subunit C; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol.


ensembl_gene_id: SAMN05192588_1923
symbol: nqrB
gene_biotype: protein_coding
description:
  Na+-transporting NADH:ubiquinone oxidoreductase subunit B; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol.


ensembl_gene_id: SAMN05192588_1924
symbol: nqrA
gene_biotype: protein_coding
description:
  Na+-transporting NADH:ubiquinone oxidoreductase subunit A; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol.


ensembl_gene_id: SAMN05192588_1929
symbol: rsmG
gene_biotype: protein_coding
description:
  16S rRNA m(7)G-527 methyltransferase; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.


ensembl_gene_id: SAMN05192588_1933
symbol: menG
gene_biotype: protein_coding
description:
  Demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2).


ensembl_gene_id: SAMN05192588_1935
symbol: SCY26224.1
gene_biotype: protein_coding
description:
  RNA methyltransferase, TrmH family; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: SAMN05192588_1938
symbol: SCY26267.1
gene_biotype: protein_coding
description:
  Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family.


ensembl_gene_id: SAMN05192588_1939
symbol: accD
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase carboxyl transferase subunit beta; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA.


ensembl_gene_id: SAMN05192588_1941
symbol: rpsO
gene_biotype: protein_coding
description:
  SSU ribosomal protein S15P; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.


ensembl_gene_id: SAMN05192588_1942
symbol: pnp
gene_biotype: protein_coding
description:
  Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.


ensembl_gene_id: SAMN05192588_1966
symbol: ileS
gene_biotype: protein_coding
description:
  Isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 2 subfamily.


ensembl_gene_id: SAMN05192588_1969
symbol: lspA
gene_biotype: protein_coding
description:
  Signal peptidase II; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.


ensembl_gene_id: SAMN05192588_1972
symbol: SCY26981.1
gene_biotype: protein_coding
description:
  5-formyltetrahydrofolate cyclo-ligase; Manually curated; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.


ensembl_gene_id: SAMN05192588_1987
symbol: thyA
gene_biotype: protein_coding
description:
  Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis.


ensembl_gene_id: SAMN05192588_1993
symbol: SCY27439.1
gene_biotype: protein_coding
description:
  Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.


ensembl_gene_id: SAMN05192588_1995
symbol: hppA
gene_biotype: protein_coding
description:
  K(+)-stimulated pyrophosphate-energized sodium pump; Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na(+) movement across the membrane. Belongs to the H(+)-translocating pyrophosphatase (TC 3.A.10) family. K(+)-stimulated subfamily.


ensembl_gene_id: SAMN05192588_2001
symbol: rplM
gene_biotype: protein_coding
description:
  LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.


ensembl_gene_id: SAMN05192588_2004
symbol: tsf
gene_biotype: protein_coding
description:
  Translation elongation factor Ts (EF-Ts); Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.


ensembl_gene_id: SAMN05192588_2008
symbol: frr
gene_biotype: protein_coding
description:
  Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.


ensembl_gene_id: SAMN05192588_2030
symbol: rimM
gene_biotype: protein_coding
description:
  16S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.


ensembl_gene_id: SAMN05192588_2031
symbol: SCY28164.1
gene_biotype: protein_coding
description:
  tRNA1Val (adenine37-N6)-methyltransferase; Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC).


ensembl_gene_id: SAMN05192588_2037
symbol: SCY28327.1
gene_biotype: protein_coding
description:
  ATP-binding protein involved in chromosome partitioning; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.


ensembl_gene_id: SAMN05192588_2042
symbol: uvrC
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.


ensembl_gene_id: SAMN05192588_2054
symbol: mfd
gene_biotype: protein_coding
description:
  Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.


ensembl_gene_id: SAMN05192588_2074
symbol: hemH
gene_biotype: protein_coding
description:
  Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.


ensembl_gene_id: SAMN05192588_2083
symbol: SCY29143.1
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.


ensembl_gene_id: SAMN05192588_2084
symbol: rnc
gene_biotype: protein_coding
description:
  RNAse III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.


ensembl_gene_id: SAMN05192588_2087
symbol: dinB
gene_biotype: protein_coding
description:
  DNA polymerase-4; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.


ensembl_gene_id: SAMN05192588_2092
symbol: SCY29303.1
gene_biotype: protein_coding
description:
  Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.


ensembl_gene_id: SAMN05192588_2094
symbol: kbl
gene_biotype: protein_coding
description:
  2-amino-3-ketobutyrate coenzyme A ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA.


ensembl_gene_id: SAMN05192588_2105
symbol: hemE
gene_biotype: protein_coding
description:
  Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.


ensembl_gene_id: SAMN05192588_2106
symbol: SCY29530.1
gene_biotype: protein_coding
description:
  uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.


ensembl_gene_id: SAMN05192588_2110
symbol: nadD
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).


ensembl_gene_id: SAMN05192588_2112
symbol: gpsA
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate dehydrogenase (NAD(P)+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: SAMN05192588_2131
symbol: SCY29962.1
gene_biotype: protein_coding
description:
  Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.


ensembl_gene_id: SAMN05192588_2138
symbol: SCY30133.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage; Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily.


ensembl_gene_id: SAMN05192588_2139
symbol: SCY30153.1
gene_biotype: protein_coding
description:
  2-amino-4-hydroxy-6- hydroxymethyldihydropteridinediphosphokinase; Non-canonical start codon; manually curated.


ensembl_gene_id: SAMN05192588_2161
symbol: ctaB
gene_biotype: protein_coding
description:
  Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.


ensembl_gene_id: SAMN05192588_2164
symbol: SCY30673.1
gene_biotype: protein_coding
description:
  Cell division protein FtsX; Required for cell division and gliding motility. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.


ensembl_gene_id: SAMN05192588_2166
symbol: uppP
gene_biotype: protein_coding
description:
  Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.


ensembl_gene_id: SAMN05192588_2167
symbol: truB
gene_biotype: protein_coding
description:
  tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.


ensembl_gene_id: SAMN05192588_2179
symbol: SCY30950.1
gene_biotype: protein_coding
description:
  Manganese/zinc/iron transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family.


ensembl_gene_id: SAMN05192588_2190
symbol: SCY31166.1
gene_biotype: protein_coding
description:
  26S proteasome non-ATPase regulatory subunit 10/serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A.


ensembl_gene_id: SAMN05192588_2192
symbol: greA
gene_biotype: protein_coding
description:
  Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.


ensembl_gene_id: SAMN05192588_2200
symbol: metG
gene_biotype: protein_coding
description:
  methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.


ensembl_gene_id: SAMN05192588_2211
symbol: thiL
gene_biotype: protein_coding
description:
  Thiamine-phosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family.


ensembl_gene_id: SAMN05192588_2218
symbol: SCY31705.1
gene_biotype: protein_coding
description:
  Cysteine desulfurase / selenocysteine lyase; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: SAMN05192588_2226
symbol: hflX
gene_biotype: protein_coding
description:
  GTP-binding protein HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.


ensembl_gene_id: SAMN05192588_2237
symbol: hemA
gene_biotype: protein_coding
description:
  glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).


ensembl_gene_id: SAMN05192588_2238
symbol: SCY32051.1
gene_biotype: protein_coding
description:
  Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.


ensembl_gene_id: SAMN05192588_2252
symbol: SCY32293.1
gene_biotype: protein_coding
description:
  NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: SAMN05192588_2280
symbol: glyQS
gene_biotype: protein_coding
description:
  glycyl-tRNA synthetase; Catalyzes the attachment of glycine to tRNA(Gly). Belongs to the class-II aminoacyl-tRNA synthetase family.


ensembl_gene_id: SAMN05192588_2307
symbol: tatA
gene_biotype: protein_coding
description:
  Sec-independent protein translocase protein TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.


ensembl_gene_id: SAMN05192588_2314
symbol: mnmG
gene_biotype: protein_coding
description:
  tRNA uridine 5-carboxymethylaminomethyl modification enzyme; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.


ensembl_gene_id: SAMN05192588_2315
symbol: ybeY
gene_biotype: protein_coding
description:
  rRNA maturation RNase YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.


ensembl_gene_id: SAMN05192588_2318
symbol: gltX
gene_biotype: protein_coding
description:
  glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.


ensembl_gene_id: SAMN05192588_2326
symbol: SCY33463.1
gene_biotype: protein_coding
description:
  Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.


ensembl_gene_id: SAMN05192588_2333
symbol: rnr
gene_biotype: protein_coding
description:
  RNAse R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.


ensembl_gene_id: SAMN05192588_2349
symbol: rnpA
gene_biotype: protein_coding
description:
  Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.


ensembl_gene_id: SAMN05192588_2355
symbol: rbfA
gene_biotype: protein_coding
description:
  Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.


ensembl_gene_id: SAMN05192588_2357
symbol: SCY33960.1
gene_biotype: protein_coding
description:
  tRNA-U20-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.


ensembl_gene_id: SAMN05192588_2359
symbol: lepA
gene_biotype: protein_coding
description:
  GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.


ensembl_gene_id: SAMN05192588_2371
symbol: SCY34195.1
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: SAMN05192588_2372
symbol: SCY34210.1
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase, biotin carboxylase subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: SAMN05192588_2378
symbol: asd
gene_biotype: protein_coding
description:
  Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.


ensembl_gene_id: SAMN05192588_2380
symbol: SCY34354.1
gene_biotype: protein_coding
description:
  Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.


ensembl_gene_id: SAMN05192588_2384
symbol: atpG
gene_biotype: protein_coding
description:
  ATP synthase F1 subcomplex gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.


ensembl_gene_id: SAMN05192588_2385
symbol: atpA
gene_biotype: protein_coding
description:
  F-type H+-transporting ATPase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.


ensembl_gene_id: SAMN05192588_2386
symbol: atpH
gene_biotype: protein_coding
description:
  ATP synthase F1 subcomplex delta subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: SAMN05192588_2387
symbol: atpF
gene_biotype: protein_coding
description:
  ATP synthase F0 subcomplex B subunit; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.


ensembl_gene_id: SAMN05192588_2388
symbol: atpE
gene_biotype: protein_coding
description:
  ATP synthase F0 subcomplex C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: SAMN05192588_2389
symbol: atpB
gene_biotype: protein_coding
description:
  ATP synthase F0 subcomplex A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.


ensembl_gene_id: SAMN05192588_2409
symbol: recA
gene_biotype: protein_coding
description:
  Recombination protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.


ensembl_gene_id: SAMN05192588_2415
symbol: rsmI
gene_biotype: protein_coding
description:
  16S rRNA (cytidine1402-2'-O)-methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.


ensembl_gene_id: SAMN05192588_2419
symbol: dut
gene_biotype: protein_coding
description:
  dUTP pyrophosphatase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family.


ensembl_gene_id: SAMN05192588_2432
symbol: pheS
gene_biotype: protein_coding
description:
  phenylalanyl-tRNA synthetase, alpha subunit; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.


ensembl_gene_id: SAMN05192588_2437
symbol: nbaC
gene_biotype: protein_coding
description:
  3-hydroxyanthranilate 3,4-dioxygenase; Catalyzes the oxidative ring opening of 3-hydroxyanthranilate to 2-amino-3-carboxymuconate semialdehyde, which spontaneously cyclizes to quinolinate; Belongs to the 3-HAO family.


ensembl_gene_id: SAMN05192588_2445
symbol: radA
gene_biotype: protein_coding
description:
  DNA repair protein RadA/Sms; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.


ensembl_gene_id: SAMN05192588_2447
symbol: panD
gene_biotype: protein_coding
description:
  L-aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.


ensembl_gene_id: SAMN05192588_2448
symbol: panC
gene_biotype: protein_coding
description:
  Pantothenate synthetase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.


ensembl_gene_id: SAMN05192588_2451
symbol: glmS
gene_biotype: protein_coding
description:
  Glucosamine--fructose-6-phosphate aminotransferase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.


ensembl_gene_id: SAMN05192588_2452
symbol: atpD
gene_biotype: protein_coding
description:
  ATP synthase F1 subcomplex beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.


ensembl_gene_id: SAMN05192588_2460
symbol: bioD
gene_biotype: protein_coding
description:
  Dethiobiotin synthetase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring.


ensembl_gene_id: SAMN05192588_2461
symbol: SCY35739.1
gene_biotype: protein_coding
description:
  Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: SAMN05192588_2464
symbol: bioB
gene_biotype: protein_coding
description:
  Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.


ensembl_gene_id: SAMN05192588_2471
symbol: SCY35950.1
gene_biotype: protein_coding
description:
  Single-strand binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.


ensembl_gene_id: SAMN05192588_2478
symbol: rplU
gene_biotype: protein_coding
description:
  LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.


ensembl_gene_id: SAMN05192588_2484
symbol: ahcY
gene_biotype: protein_coding
description:
  Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.


ensembl_gene_id: SAMN05192588_2535
symbol: aat
gene_biotype: protein_coding
description:
  leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine.


ensembl_gene_id: SAMN05192588_2539
symbol: SCY37256.1
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.


ensembl_gene_id: SAMN05192588_2540
symbol: clpP
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease, protease subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: SAMN05192588_2546
symbol: pdxJ
gene_biotype: protein_coding
description:
  Pyridoxine 5'-phosphate synthase; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate.


ensembl_gene_id: SAMN05192588_2548
symbol: nadK
gene_biotype: protein_coding
description:
  NAD+ kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.


ensembl_gene_id: SAMN05192588_2550
symbol: SCY37459.1
gene_biotype: protein_coding
description:
  Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.


ensembl_gene_id: SAMN05192588_2555
symbol: mutS
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.


ensembl_gene_id: SAMN05192588_2580
symbol: SCY38041.1
gene_biotype: protein_coding
description:
  Putative SOS response-associated peptidase YedK; Belongs to the SOS response-associated peptidase family.


ensembl_gene_id: SAMN05192588_2589
symbol: SCY38202.1
gene_biotype: protein_coding
description:
  3-deoxy-D-manno-octulosonic-acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family.


ensembl_gene_id: SAMN05192588_2595
symbol: aspS
gene_biotype: protein_coding
description:
  aspartyl-tRNA synthetase; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor end of tRNA(Asp). Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.


ensembl_gene_id: SAMN05192588_2598
symbol: tadA
gene_biotype: protein_coding
description:
  tRNA(adenine34) deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: SAMN05192588_2599
symbol: dxs
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.


ensembl_gene_id: SAMN05192588_2606
symbol: SCY38576.1
gene_biotype: protein_coding
description:
  RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: SAMN05192588_2616
symbol: SCY38788.1
gene_biotype: protein_coding
description:
  2-oxoglutarate dehydrogenase E2 component; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2).


ensembl_gene_id: SAMN05192588_2625
symbol: polA
gene_biotype: protein_coding
description:
  DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.


ensembl_gene_id: SAMN05192588_2637
symbol: rimP
gene_biotype: protein_coding
description:
  Ribosome maturation factor RimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.


ensembl_gene_id: SAMN05192588_2639
symbol: infB
gene_biotype: protein_coding
description:
  Bacterial translation initiation factor 2 (bIF-2); One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.


ensembl_gene_id: SAMN05192588_2647
symbol: SCY39441.1
gene_biotype: protein_coding
description:
  Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).


ensembl_gene_id: SAMN05192588_2650
symbol: ruvB
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase subunit RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.


ensembl_gene_id: SAMN05192588_2653
symbol: ruvA
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase subunit RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.


ensembl_gene_id: SAMN05192588_2655
symbol: gcvH
gene_biotype: protein_coding
description:
  Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.


ensembl_gene_id: SAMN05192588_2663
symbol: pckA
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate carboxykinase (ATP); Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA.


ensembl_gene_id: SAMN05192588_2670
symbol: tyrS
gene_biotype: protein_coding
description:
  tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily.


ensembl_gene_id: SAMN05192588_2677
symbol: trmB
gene_biotype: protein_coding
description:
  tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.


ensembl_gene_id: SAMN05192588_2687
symbol: SCY40204.1
gene_biotype: protein_coding
description:
  Oxygen-independent coproporphyrinogen-3 oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: SAMN05192588_2784
symbol: ruvC
gene_biotype: protein_coding
description:
  Holliday junction endonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.


ensembl_gene_id: SAMN05192588_2786
symbol: SCY42017.1
gene_biotype: protein_coding
description:
  Purine-nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.


ensembl_gene_id: SAMN05192588_2799
symbol: rsmA
gene_biotype: protein_coding
description:
  Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.


ensembl_gene_id: SAMN05192588_2805
symbol: pth
gene_biotype: protein_coding
description:
  peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.


ensembl_gene_id: SAMN05192588_2806
symbol: rplY
gene_biotype: protein_coding
description:
  LSU ribosomal protein L25P; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.


ensembl_gene_id: SAMN05192588_2827
symbol: SCY42728.1
gene_biotype: protein_coding
description:
  Por secretion system C-terminal sorting domain-containing protein; Belongs to the glycosyl hydrolase 13 family.


ensembl_gene_id: SAMN05192588_2839
symbol: SCY42916.1
gene_biotype: protein_coding
description:
  Alkylhydroperoxidase/carboxymuconolactone decarboxylase family protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.


ensembl_gene_id: SAMN05192588_2849
symbol: metK
gene_biotype: protein_coding
description:
  Methionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.


ensembl_gene_id: SAMN05192588_2853
symbol: ilvC
gene_biotype: protein_coding
description:
  Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate.


ensembl_gene_id: SAMN05192588_2854
symbol: ilvA
gene_biotype: protein_coding
description:
  L-threonine ammonia-lyase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA.


ensembl_gene_id: SAMN05192588_2857
symbol: leuB
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.


ensembl_gene_id: SAMN05192588_2858
symbol: leuD
gene_biotype: protein_coding
description:
  3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily.


ensembl_gene_id: SAMN05192588_2859
symbol: leuC
gene_biotype: protein_coding
description:
  3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.


ensembl_gene_id: SAMN05192588_2869
symbol: SCY43440.1
gene_biotype: protein_coding
description:
  5-methyltetrahydrofolate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.


ensembl_gene_id: SAMN05192588_2870
symbol: SCY43469.1
gene_biotype: protein_coding
description:
  5,10-methylenetetrahydrofolate reductase (NAD(P)); Belongs to the methylenetetrahydrofolate reductase family.


ensembl_gene_id: SAMN05192588_2883
symbol: rsgA
gene_biotype: protein_coding
description:
  Ribosome biogenesis GTPase; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.


ensembl_gene_id: SAMN05192588_2884
symbol: dtd
gene_biotype: protein_coding
description:
  D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family.


ensembl_gene_id: SAMN05192588_2888
symbol: SCY43769.1
gene_biotype: protein_coding
description:
  3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.


ensembl_gene_id: SAMN05192588_2889
symbol: queA
gene_biotype: protein_coding
description:
  S-adenosylmethionine--tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).


ensembl_gene_id: SAMN05192588_2891
symbol: rlmN
gene_biotype: protein_coding
description:
  23S rRNA m(2)A-2503 methyltransferase; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family.


ensembl_gene_id: SAMN05192588_2893
symbol: der
gene_biotype: protein_coding
description:
  GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.


ensembl_gene_id: SAMN05192588_2924
symbol: surE
gene_biotype: protein_coding
description:
  5'-nucleotidase /3'-nucleotidase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.


ensembl_gene_id: SAMN05192588_2926
symbol: SCY44394.1
gene_biotype: protein_coding
description:
  lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: SAMN05192588_2940
symbol: coaX
gene_biotype: protein_coding
description:
  Type III pantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.


ensembl_gene_id: SAMN05192588_2943
symbol: murF
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.


ensembl_gene_id: SAMN05192588_2948
symbol: pdhA
gene_biotype: protein_coding
description:
  Pyruvate dehydrogenase E1 component alpha subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).


ensembl_gene_id: SAMN05192588_2949
symbol: SCY44818.1
gene_biotype: protein_coding
description:
  Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase); The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).


ensembl_gene_id: SAMN05192588_2952
symbol: purK
gene_biotype: protein_coding
description:
  5-(carboxyamino)imidazole ribonucleotide synthase; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR).


ensembl_gene_id: SAMN05192588_2954
symbol: adk
gene_biotype: protein_coding
description:
  Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.


ensembl_gene_id: SAMN05192588_2955
symbol: obg
gene_biotype: protein_coding
description:
  GTP-binding protein; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.


ensembl_gene_id: SAMN05192588_2967
symbol: xerC-2
gene_biotype: protein_coding
description:
  Integrase/recombinase XerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.


ensembl_gene_id: SAMN05192588_2972
symbol: tuf
gene_biotype: protein_coding
description:
  Translation elongation factor 1A (EF-1A/EF-Tu); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.


ensembl_gene_id: SAMN05192588_2974
symbol: secE
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.


ensembl_gene_id: SAMN05192588_2975
symbol: nusG
gene_biotype: protein_coding
description:
  Transcription antitermination protein nusG; Participates in transcription elongation, termination and antitermination.


ensembl_gene_id: SAMN05192588_2976
symbol: rplK
gene_biotype: protein_coding
description:
  LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.


ensembl_gene_id: SAMN05192588_2977
symbol: rplA
gene_biotype: protein_coding
description:
  LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.


ensembl_gene_id: SAMN05192588_2978
symbol: rplJ
gene_biotype: protein_coding
description:
  LSU ribosomal protein L10P; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.


ensembl_gene_id: SAMN05192588_2979
symbol: rplL
gene_biotype: protein_coding
description:
  LSU ribosomal protein L12P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.


ensembl_gene_id: SAMN05192588_2980
symbol: rpoB
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


# pathwayInfo

id: CL:100
description: Carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity, and Amino acid binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:100_Carbamoyl-phosphate_synthase_(glutamine-hydrolyzing)_activity,_and_Amino_acid_binding


id: CL:1032
description: Aminoacyl-tRNA synthetase, class Ia, anticodon-binding, and Glutamyl/glutaminyl-tRNA synthetase
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1032_Aminoacyl-tRNA_synthetase,_class_Ia,_anticodon-binding,_and_Glutamyl/glutaminyl-tRNA_synthetase


id: CL:1062
description: RNA helicase, DEAD-box type, Q motif, and Ribosomal protein S1-like RNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1062_RNA_helicase,_DEAD-box_type,_Q_motif,_and_Ribosomal_protein_S1-like_RNA-binding_domain


id: CL:1064
description: RNA helicase, DEAD-box type, Q motif, and Phosphomethylpyrimidine kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1064_RNA_helicase,_DEAD-box_type,_Q_motif,_and_Phosphomethylpyrimidine_kinase


id: CL:1085
description: Mixed, incl. Chaperone, and ATP-dependent peptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1085_Mixed,_incl._Chaperone,_and_ATP-dependent_peptidase_activity


id: CL:1087
description: Chaperone, and ATP-dependent peptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1087_Chaperone,_and_ATP-dependent_peptidase_activity


id: CL:1090
description: Protein folding chaperone, and Chaperone binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1090_Protein_folding_chaperone,_and_Chaperone_binding


id: CL:1107
description: Clp ATPase, C-terminal, and Protein catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1107_Clp_ATPase,_C-terminal,_and_Protein_catabolic_process


id: CL:1117
description: Mixed, incl. Tetratricopeptide repeats, and Caspase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1117_Mixed,_incl._Tetratricopeptide_repeats,_and_Caspase_domain


id: CL:1121
description: Tetratricopeptide repeats, and Threonyl/alanyl tRNA synthetase, SAD
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1121_Tetratricopeptide_repeats,_and_Threonyl/alanyl_tRNA_synthetase,_SAD


id: CL:1146
description: Mixed, incl. RNA 2-O ribose methyltransferase substrate binding, and GTP binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1146_Mixed,_incl._RNA_2-O_ribose_methyltransferase_substrate_binding,_and_GTP_binding_domain


id: CL:115
description: Uracil phosphoribosyltransferase activity, and CTP metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:115_Uracil_phosphoribosyltransferase_activity,_and_CTP_metabolic_process


id: CL:1169
description: Catalytic activity, acting on DNA, and Ribonuclease H superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1169_Catalytic_activity,_acting_on_DNA,_and_Ribonuclease_H_superfamily


id: CL:1171
description: DNA replication, and Nucleotide excision repair
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1171_DNA_replication,_and_Nucleotide_excision_repair


id: CL:1172
description: DNA replication, and DNA excision
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1172_DNA_replication,_and_DNA_excision


id: CL:1174
description: DNA-directed DNA polymerase activity, and DNA ligase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1174_DNA-directed_DNA_polymerase_activity,_and_DNA_ligase_activity


id: CL:1176
description: DNA polymerase III complex, and PHP domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1176_DNA_polymerase_III_complex,_and_PHP_domain


id: CL:1202
description: Primosome, and Single-stranded DNA-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1202_Primosome,_and_Single-stranded_DNA-binding_protein


id: CL:1216
description: Mixed, incl. SOS response, and Mismatch repair
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1216_Mixed,_incl._SOS_response,_and_Mismatch_repair


id: CL:1219
description: RecQ zinc-binding, and DExx box DNA helicase domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1219_RecQ_zinc-binding,_and_DExx_box_DNA_helicase_domain_superfamily


id: CL:1236
description: DNA-directed DNA polymerase, and DNA recombination and repair protein RecA-like, ATP-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1236_DNA-directed_DNA_polymerase,_and_DNA_recombination_and_repair_protein_RecA-like,_ATP-binding_domain


id: CL:125
description: 5-Nucleotidase/apyrase, and Phosphorylase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:125_5-Nucleotidase/apyrase,_and_Phosphorylase_superfamily


id: CL:1259
description: Mixed, incl. HhH-GPD domain, and Transporter-associated domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1259_Mixed,_incl._HhH-GPD_domain,_and_Transporter-associated_domain


id: CL:1275
description: Mixed, incl. HupE / UreJ protein, and Protein carboxylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1275_Mixed,_incl._HupE_/_UreJ_protein,_and_Protein_carboxylation


id: CL:1277
description: Mixed, incl. Tetratricopeptide repeat, and rRNA (adenine) methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1277_Mixed,_incl._Tetratricopeptide_repeat,_and_rRNA_(adenine)_methyltransferase_activity


id: CL:1308
description: Mixed, incl. Selenocompound metabolism, and Sulfur relay system
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1308_Mixed,_incl._Selenocompound_metabolism,_and_Sulfur_relay_system


id: CL:1309
description: Mixed, incl. Sulfur relay system, and Sulphur transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1309_Mixed,_incl._Sulfur_relay_system,_and_Sulphur_transport


id: CL:1310
description: Mixed, incl. Prosthetic group metabolic process, and Sulfur relay system
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1310_Mixed,_incl._Prosthetic_group_metabolic_process,_and_Sulfur_relay_system


id: CL:1311
description: Mixed, incl. Prosthetic group metabolic process, and Sulfur relay system
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1311_Mixed,_incl._Prosthetic_group_metabolic_process,_and_Sulfur_relay_system


id: CL:1314
description: Prosthetic group metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1314_Prosthetic_group_metabolic_process


id: CL:1327
description: Mixed, incl. FAD-binding domain, PCMH-type, and MobA-like NTP transferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1327_Mixed,_incl._FAD-binding_domain,_PCMH-type,_and_MobA-like_NTP_transferase_domain


id: CL:1336
description: Mixed, incl. ANK repeat, and TonB-dependent receptor-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1336_Mixed,_incl._ANK_repeat,_and_TonB-dependent_receptor-like


id: CL:1345
description: Mixed, incl. Rhodanese Homology Domain, and Sulphur transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1345_Mixed,_incl._Rhodanese_Homology_Domain,_and_Sulphur_transport


id: CL:1348
description: Sulfur dioxygenase activity, and tRNA pseudouridine synthase
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1348_Sulfur_dioxygenase_activity,_and_tRNA_pseudouridine_synthase


id: CL:1361
description: Mixed, incl. Sulphur transport, and Cyclic nucleotide-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1361_Mixed,_incl._Sulphur_transport,_and_Cyclic_nucleotide-binding_domain


id: CL:1374
description: Selenocompound metabolism, and Iron-sulfur cluster assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1374_Selenocompound_metabolism,_and_Iron-sulfur_cluster_assembly


id: CL:1375
description: Mixed, incl. Iron-sulfur cluster assembly, and Protein of unknown function DUF3078
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1375_Mixed,_incl._Iron-sulfur_cluster_assembly,_and_Protein_of_unknown_function_DUF3078


id: CL:1377
description: Mixed, incl. Iron-sulfur cluster assembly, and META domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1377_Mixed,_incl._Iron-sulfur_cluster_assembly,_and_META_domain


id: CL:1380
description: SUF system FeS cluster assembly, SufBD, and Cysteine desulfurase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1380_SUF_system_FeS_cluster_assembly,_SufBD,_and_Cysteine_desulfurase_activity


id: CL:139
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:139_Mixed,_incl._Pseudouridine_synthase,_RsuA/RluB/E/F,_catalytic_domain,_and_Ribonucleotide_reductase-like

description:
  Mixed, incl. Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain, and Ribonucleotide reductase-like


id: CL:140
description: Ribonucleotide reductase-like, and UTP metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:140_Ribonucleotide_reductase-like,_and_UTP_metabolic_process


id: CL:1406
description: Selenocompound metabolism, and Peroxiredoxin, AhpC-type
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1406_Selenocompound_metabolism,_and_Peroxiredoxin,_AhpC-type


id: CL:1408
description: Pyridine nucleotide-disulphide oxidoreductase, and Thioredoxin, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1408_Pyridine_nucleotide-disulphide_oxidoreductase,_and_Thioredoxin,_conserved_site


id: CL:1429
description: Mixed, incl. Pyridine nucleotide biosynthetic process, and Pantothenate and CoA biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1429_Mixed,_incl._Pyridine_nucleotide_biosynthetic_process,_and_Pantothenate_and_CoA_biosynthesis


id: CL:1430
description: Mixed, incl. Pyridine nucleotide biosynthetic process, and rRNA methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1430_Mixed,_incl._Pyridine_nucleotide_biosynthetic_process,_and_rRNA_methyltransferase_activity


id: CL:1431
description: Mixed, incl. Pyridine nucleotide biosynthetic process, and Nucleoside transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1431_Mixed,_incl._Pyridine_nucleotide_biosynthetic_process,_and_Nucleoside_transport


id: CL:1432
description: Mixed, incl. Pyridine nucleotide biosynthetic process, and Nucleoside transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1432_Mixed,_incl._Pyridine_nucleotide_biosynthetic_process,_and_Nucleoside_transport


id: CL:1435
description: Ribosylnicotinamide kinase activity, and Nucleoside transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1435_Ribosylnicotinamide_kinase_activity,_and_Nucleoside_transport


id: CL:1448
description: Pyridine nucleotide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1448_Pyridine_nucleotide_biosynthetic_process


id: CL:1459
description: Mixed, incl. Virulence factor BrkB, and Glutathione biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1459_Mixed,_incl._Virulence_factor_BrkB,_and_Glutathione_biosynthetic_process


id: CL:1473
description: Mixed, incl. DHH family, and Proteolipid membrane potential modulator
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1473_Mixed,_incl._DHH_family,_and_Proteolipid_membrane_potential_modulator


id: CL:1486
description: Mixed, incl. Pantothenate and CoA biosynthesis, and Toxin-antitoxin complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1486_Mixed,_incl._Pantothenate_and_CoA_biosynthesis,_and_Toxin-antitoxin_complex


id: CL:1487
description: Mixed, incl. Pantothenate metabolic process, and Coenzyme A biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1487_Mixed,_incl._Pantothenate_metabolic_process,_and_Coenzyme_A_biosynthesis


id: CL:1488
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1488_Mixed,_incl._Toxin-antitoxin_complex,_and_DNA_recombination_and_repair_protein_RecA-like,_ATP-binding_domain

description:
  Mixed, incl. Toxin-antitoxin complex, and DNA recombination and repair protein RecA-like, ATP-binding domain


id: CL:149
description: Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain, and Ferrous iron transport protein B
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:149_Pseudouridine_synthase,_RsuA/RluB/E/F,_catalytic_domain,_and_Ferrous_iron_transport_protein_B


id: CL:1499
description: Pantothenate metabolic process, and Coenzyme A biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1499_Pantothenate_metabolic_process,_and_Coenzyme_A_biosynthesis


id: CL:1511
description: Mixed, incl. RecF/RecN/SMC, N-terminal, and Protein phosphopantetheinylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1511_Mixed,_incl._RecF/RecN/SMC,_N-terminal,_and_Protein_phosphopantetheinylation


id: CL:1533
description: DNA topoisomerase, type IIA-like domain superfamily, and Large-conductance mechanosensitive channel
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1533_DNA_topoisomerase,_type_IIA-like_domain_superfamily,_and_Large-conductance_mechanosensitive_channel


id: CL:1546
description: Mixed, incl. Base-excision repair, and Protein carboxylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1546_Mixed,_incl._Base-excision_repair,_and_Protein_carboxylation


id: CL:1548
description: Base-excision repair, and Peroxiredoxin, AhpC-type
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1548_Base-excision_repair,_and_Peroxiredoxin,_AhpC-type


id: CL:1570
description: Mixed, incl. Generation of precursor metabolites and energy, and Oxidative phosphorylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1570_Mixed,_incl._Generation_of_precursor_metabolites_and_energy,_and_Oxidative_phosphorylation


id: CL:1571
description: Mixed, incl. Generation of precursor metabolites and energy, and Oxidative phosphorylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1571_Mixed,_incl._Generation_of_precursor_metabolites_and_energy,_and_Oxidative_phosphorylation


id: CL:1572
description: Mixed, incl. Oxidative phosphorylation, and TPM domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1572_Mixed,_incl._Oxidative_phosphorylation,_and_TPM_domain


id: CL:1574
description: Mixed, incl. Oxidative phosphorylation, and Electron transfer activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1574_Mixed,_incl._Oxidative_phosphorylation,_and_Electron_transfer_activity


id: CL:1575
description: Mixed, incl. Electron transfer activity, and Copper chaperone SCO1/SenC
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1575_Mixed,_incl._Electron_transfer_activity,_and_Copper_chaperone_SCO1/SenC


id: CL:1576
description: Mixed, incl. Cytochrome-c oxidase activity, and Copper chaperone SCO1/SenC
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1576_Mixed,_incl._Cytochrome-c_oxidase_activity,_and_Copper_chaperone_SCO1/SenC


id: CL:158
description: Mixed, incl. Pteridine-containing compound metabolic process, and Riboflavin metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:158_Mixed,_incl._Pteridine-containing_compound_metabolic_process,_and_Riboflavin_metabolic_process


id: CL:160
description: Folate biosynthesis, and Riboflavin metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:160_Folate_biosynthesis,_and_Riboflavin_metabolic_process


id: CL:1601
description: Mixed, incl. Plant-pathogen interaction, and Cytochrome c-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1601_Mixed,_incl._Plant-pathogen_interaction,_and_Cytochrome_c-like_domain


id: CL:1614
description: Mixed, incl. Peptidase M16, C-terminal, and NAD(P)-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1614_Mixed,_incl._Peptidase_M16,_C-terminal,_and_NAD(P)-binding_domain


id: CL:163
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:163_GTP_cyclohydrolase_I,_C-terminal/NADPH-dependent_7-cyano-7-deazaguanine_reductase,_and_Folate_biosynthesis

description:
  GTP cyclohydrolase I, C-terminal/NADPH-dependent 7-cyano-7-deazaguanine reductase, and Folate biosynthesis


id: CL:1636
description: TPM domain, and Protein ubiquitination
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1636_TPM_domain,_and_Protein_ubiquitination


id: CL:1653
description: Mixed, incl. Protein of unknown function DUF2911, and GlcNAc-PI de-N-acetylase
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1653_Mixed,_incl._Protein_of_unknown_function_DUF2911,_and_GlcNAc-PI_de-N-acetylase


id: CL:1655
description: Mixed, incl. Protein of unknown function DUF2911, and GlcNAc-PI de-N-acetylase
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1655_Mixed,_incl._Protein_of_unknown_function_DUF2911,_and_GlcNAc-PI_de-N-acetylase


id: CL:1657
description: Mixed, incl. GlcNAc-PI de-N-acetylase, and Glycosyl transferase 4-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1657_Mixed,_incl._GlcNAc-PI_de-N-acetylase,_and_Glycosyl_transferase_4-like


id: CL:1673
description: Mixed, incl. Alpha-helical ferredoxin, and HAD superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1673_Mixed,_incl._Alpha-helical_ferredoxin,_and_HAD_superfamily


id: CL:1695
description: Mixed, incl. Elongation factor G C-terminus, and Phospholipase/carboxylesterase/thioesterase
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1695_Mixed,_incl._Elongation_factor_G_C-terminus,_and_Phospholipase/carboxylesterase/thioesterase


id: CL:1711
description: Mixed, incl. Porphyrin biosynthesis, and Exoribonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1711_Mixed,_incl._Porphyrin_biosynthesis,_and_Exoribonuclease_activity


id: CL:1713
description: Porphyrin biosynthesis, and Coproporphyrinogen oxidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1713_Porphyrin_biosynthesis,_and_Coproporphyrinogen_oxidase_activity


id: CL:1715
description: Protoporphyrinogen IX metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1715_Protoporphyrinogen_IX_metabolic_process


id: CL:1741
description: Mixed, incl. Inosine triphosphate pyrophosphatase-like, and Cytochrome complex assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1741_Mixed,_incl._Inosine_triphosphate_pyrophosphatase-like,_and_Cytochrome_complex_assembly


id: CL:1750
description: Mostly uncharacterized, incl. Ion channel, and RNA 3-end processing
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1750_Mostly_uncharacterized,_incl._Ion_channel,_and_RNA_3-end_processing


id: CL:1752
description: Mixed, incl. RNA 3-end processing, and Protein glycosylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1752_Mixed,_incl._RNA_3-end_processing,_and_Protein_glycosylation


id: CL:1787
description: Mixed, incl. Transmembrane, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1787_Mixed,_incl._Transmembrane,_and_Signal


id: CL:1789
description: Mixed, incl. Signal, and Transmembrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1789_Mixed,_incl._Signal,_and_Transmembrane


id: CL:1790
description: Mixed, incl. Envelope, and Transmembrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1790_Mixed,_incl._Envelope,_and_Transmembrane


id: CL:1791
description: Mostly uncharacterized, incl. Envelope, and Cationic antimicrobial peptide (CAMP) resistance
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1791_Mostly_uncharacterized,_incl._Envelope,_and_Cationic_antimicrobial_peptide_(CAMP)_resistance


id: CL:1793
description: Mostly uncharacterized, incl. Envelope, and Protein transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1793_Mostly_uncharacterized,_incl._Envelope,_and_Protein_transport


id: CL:1795
description: Mostly uncharacterized, incl. Envelope, and Protein transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1795_Mostly_uncharacterized,_incl._Envelope,_and_Protein_transport


id: CL:1797
description: Mostly uncharacterized, incl. Cell envelope, and Tetratricopeptide-like helical domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1797_Mostly_uncharacterized,_incl._Cell_envelope,_and_Tetratricopeptide-like_helical_domain_superfamily


id: CL:1799
description: Mostly uncharacterized, incl. Cell envelope, and Cationic antimicrobial peptide (CAMP) resistance
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1799_Mostly_uncharacterized,_incl._Cell_envelope,_and_Cationic_antimicrobial_peptide_(CAMP)_resistance


id: CL:1800
description: Mostly uncharacterized, incl. Cell envelope, and Benzoate degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1800_Mostly_uncharacterized,_incl._Cell_envelope,_and_Benzoate_degradation


id: CL:1802
description: Mostly uncharacterized, incl. Cell envelope, and Benzoate degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1802_Mostly_uncharacterized,_incl._Cell_envelope,_and_Benzoate_degradation


id: CL:1805
description: Mostly uncharacterized, incl. TPR repeat, and ER-Phagosome pathway
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1805_Mostly_uncharacterized,_incl._TPR_repeat,_and_ER-Phagosome_pathway


id: CL:1807
description: Mostly uncharacterized, incl. TPR repeat, and Peptidoglycan binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1807_Mostly_uncharacterized,_incl._TPR_repeat,_and_Peptidoglycan_binding


id: CL:1809
description: Mostly uncharacterized, incl. Tetratricopeptide repeat 2, and Co-chaperone DjlA, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1809_Mostly_uncharacterized,_incl._Tetratricopeptide_repeat_2,_and_Co-chaperone_DjlA,_N-terminal


id: CL:1811
description: Mixed, incl. Domain of unknown function DUF4369, and CarboxypepD_reg-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1811_Mixed,_incl._Domain_of_unknown_function_DUF4369,_and_CarboxypepD_reg-like_domain


id: CL:1823
description: Mixed, incl. Tetratricopeptide repeat 2, and Aspartic peptidase, active site
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1823_Mixed,_incl._Tetratricopeptide_repeat_2,_and_Aspartic_peptidase,_active_site


id: CL:1849
description: Mixed, incl. 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily, and SnoaL-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1849_Mixed,_incl._5-formyltetrahydrofolate_cyclo-ligase-like_domain_superfamily,_and_SnoaL-like_domain


id: CL:1867
description: Mixed, incl. Xylene degradation, and Flagellar assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1867_Mixed,_incl._Xylene_degradation,_and_Flagellar_assembly


id: CL:1891
description: Mostly uncharacterized, incl. Outer membrane protein/outer membrane enzyme PagP, beta-barrel
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1891_Mostly_uncharacterized,_incl._Outer_membrane_protein/outer_membrane_enzyme_PagP,_beta-barrel


id: CL:1903
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1903_Mostly_uncharacterized,_incl._Nucleoside_monophosphate_catabolic_process,_and_Helicase/UvrB,_N-terminal

description:
  Mostly uncharacterized, incl. Nucleoside monophosphate catabolic process, and Helicase/UvrB, N-terminal


id: CL:1905
description: Mixed, incl. Helicase/UvrB, N-terminal, and Peptidase M4/M1, CTD superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1905_Mixed,_incl._Helicase/UvrB,_N-terminal,_and_Peptidase_M4/M1,_CTD_superfamily


id: CL:1931
description: Mixed, incl. Molecular transducer activity, and Protein transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1931_Mixed,_incl._Molecular_transducer_activity,_and_Protein_transport


id: CL:1934
description: Mixed, incl. Biopolymer transport protein ExbD/TolR, and Molecular transducer activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1934_Mixed,_incl._Biopolymer_transport_protein_ExbD/TolR,_and_Molecular_transducer_activity


id: CL:1936
description: Molecular transducer activity, and Side of membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1936_Molecular_transducer_activity,_and_Side_of_membrane


id: CL:1962
description: Mixed, incl. PPIC-type PPIASE domain, and Transporter-associated domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1962_Mixed,_incl._PPIC-type_PPIASE_domain,_and_Transporter-associated_domain


id: CL:1995
description: Mixed, incl. Exodeoxyribonuclease V complex, and Methyltransferase small domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:1995_Mixed,_incl._Exodeoxyribonuclease_V_complex,_and_Methyltransferase_small_domain


id: CL:200
description: One carbon pool by folate, and Glycine cleavage complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:200_One_carbon_pool_by_folate,_and_Glycine_cleavage_complex


id: CL:2009
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2009_Mixed,_incl._Protein_of_unknown_function_DUF4252,_and_Peptidyl-lysine_modification_to_peptidyl-hypusine

description:
  Mixed, incl. Protein of unknown function DUF4252, and Peptidyl-lysine modification to peptidyl-hypusine


id: CL:201
description: One carbon pool by folate, and Glycine cleavage complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:201_One_carbon_pool_by_folate,_and_Glycine_cleavage_complex


id: CL:2011
description: Protein of unknown function DUF4252, and Peptidyl-lysine modification to peptidyl-hypusine
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2011_Protein_of_unknown_function_DUF4252,_and_Peptidyl-lysine_modification_to_peptidyl-hypusine


id: CL:2032
description: Mostly uncharacterized, incl. Peptidase S24-like, and RecF/RecN/SMC, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2032_Mostly_uncharacterized,_incl._Peptidase_S24-like,_and_RecF/RecN/SMC,_N-terminal


id: CL:2034
description: Mixed, incl. Peptidase S24-like, and Protein of unknown function DUF4199
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2034_Mixed,_incl._Peptidase_S24-like,_and_Protein_of_unknown_function_DUF4199


id: CL:204
description: Glycine metabolic process, and Methionine synthase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:204_Glycine_metabolic_process,_and_Methionine_synthase_activity


id: CL:2048
description: Mixed, incl. RecF/RecN/SMC, N-terminal, and Tetratricopeptide repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2048_Mixed,_incl._RecF/RecN/SMC,_N-terminal,_and_Tetratricopeptide_repeat


id: CL:2071
description: Mixed, incl. ABC transporter-like, conserved site, and Tetratricopeptide repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2071_Mixed,_incl._ABC_transporter-like,_conserved_site,_and_Tetratricopeptide_repeat


id: CL:2084
description: Mostly uncharacterized, incl. Terpenoid backbone biosynthesis, and START-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2084_Mostly_uncharacterized,_incl._Terpenoid_backbone_biosynthesis,_and_START-like_domain_superfamily


id: CL:2086
description: Mostly uncharacterized, incl. START-like domain superfamily, and C-type lectin fold
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2086_Mostly_uncharacterized,_incl._START-like_domain_superfamily,_and_C-type_lectin_fold


id: CL:2087
description: Mostly uncharacterized, incl. START-like domain superfamily, and C-type lectin fold
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2087_Mostly_uncharacterized,_incl._START-like_domain_superfamily,_and_C-type_lectin_fold


id: CL:2089
description: Mixed, incl. START-like domain superfamily, and C-type lectin fold
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2089_Mixed,_incl._START-like_domain_superfamily,_and_C-type_lectin_fold


id: CL:2090
description: Mixed, incl. C-type lectin fold, and Negative regulation of growth
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2090_Mixed,_incl._C-type_lectin_fold,_and_Negative_regulation_of_growth


id: CL:2093
description: Mixed, incl. C-type lectin fold, and Outer membrane protein beta-barrel domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2093_Mixed,_incl._C-type_lectin_fold,_and_Outer_membrane_protein_beta-barrel_domain


id: CL:2108
description: Mixed, incl. Negative regulation of growth, and LysE type translocator
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2108_Mixed,_incl._Negative_regulation_of_growth,_and_LysE_type_translocator


id: CL:2117
description: Mixed, incl. Single-stranded RNA binding, and START-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2117_Mixed,_incl._Single-stranded_RNA_binding,_and_START-like_domain_superfamily


id: CL:2131
description: Mixed, incl. Acid-thiol ligase activity, and Acyl-CoA reductase (LuxC)
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2131_Mixed,_incl._Acid-thiol_ligase_activity,_and_Acyl-CoA_reductase_(LuxC)


id: CL:2133
description: Mixed, incl. Uroporphyrinogen-III synthase, and Protein of unknown function DUF1573
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2133_Mixed,_incl._Uroporphyrinogen-III_synthase,_and_Protein_of_unknown_function_DUF1573


id: CL:2154
description: Mixed, incl. HDIG domain, and Cytokinetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2154_Mixed,_incl._HDIG_domain,_and_Cytokinetic_process


id: CL:2170
description: Mixed, incl. Terpenoid backbone biosynthesis, and Prohibitin homologues
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2170_Mixed,_incl._Terpenoid_backbone_biosynthesis,_and_Prohibitin_homologues


id: CL:2173
description: GHMP kinase, C-terminal domain superfamily, and Coenzyme A metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2173_GHMP_kinase,_C-terminal_domain_superfamily,_and_Coenzyme_A_metabolic_process


id: CL:2191
description: Mixed, incl. Porin activity, and Membrane organization
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2191_Mixed,_incl._Porin_activity,_and_Membrane_organization


id: CL:2192
description: Mixed, incl. Porin activity, and Protein insertion into membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2192_Mixed,_incl._Porin_activity,_and_Protein_insertion_into_membrane


id: CL:2193
description: Mixed, incl. Porin activity, and Protein insertion into membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2193_Mixed,_incl._Porin_activity,_and_Protein_insertion_into_membrane


id: CL:2194
description: Protein insertion into membrane, and Outer membrane protein/outer membrane enzyme PagP, beta-barrel
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2194_Protein_insertion_into_membrane,_and_Outer_membrane_protein/outer_membrane_enzyme_PagP,_beta-barrel


id: CL:2196
description: Chaperone protein Skp, and POTRA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2196_Chaperone_protein_Skp,_and_POTRA_domain


id: CL:2208
description: Outer membrane protein beta-barrel domain, and Outer membrane protein, OmpA-like, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2208_Outer_membrane_protein_beta-barrel_domain,_and_Outer_membrane_protein,_OmpA-like,_conserved_site


id: CL:2219
description: Type IX secretion system membrane protein PorP/SprF, and WD40-like Beta Propeller Repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2219_Type_IX_secretion_system_membrane_protein_PorP/SprF,_and_WD40-like_Beta_Propeller_Repeat


id: CL:2236
description: OmpA family, and Xenobiotic transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2236_OmpA_family,_and_Xenobiotic_transport


id: CL:2246
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2246_Mixed,_incl._GDSL-like_Lipase/Acylhydrolase,_and_Outer_membrane_protein_transport_protein_(OMPP1/FadL/TodX)

description:
  Mixed, incl. GDSL-like Lipase/Acylhydrolase, and Outer membrane protein transport protein (OMPP1/FadL/TodX)


id: CL:2258
description: Mixed, incl. Cis-trans isomerase activity, and Von Willebrand factor A-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2258_Mixed,_incl._Cis-trans_isomerase_activity,_and_Von_Willebrand_factor_A-like_domain_superfamily


id: CL:2259
description: Mixed, incl. Von Willebrand factor A-like domain superfamily, and Organelle membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2259_Mixed,_incl._Von_Willebrand_factor_A-like_domain_superfamily,_and_Organelle_membrane


id: CL:2260
description: Mixed, incl. Von Willebrand factor A-like domain superfamily, and Prohibitin homologues
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2260_Mixed,_incl._Von_Willebrand_factor_A-like_domain_superfamily,_and_Prohibitin_homologues


id: CL:2275
description: Mixed, incl. Organelle membrane, and Protein phosphopantetheinylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2275_Mixed,_incl._Organelle_membrane,_and_Protein_phosphopantetheinylation


id: CL:228
description: Aminotransferase, class I/classII, and Cys/Met metabolism PLP-dependent enzyme
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:228_Aminotransferase,_class_I/classII,_and_Cys/Met_metabolism_PLP-dependent_enzyme


id: CL:2284
description: Peptidyl-prolyl cis-trans isomerase, PpiC-type, and ATPase, AAA-3
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2284_Peptidyl-prolyl_cis-trans_isomerase,_PpiC-type,_and_ATPase,_AAA-3


id: CL:2293
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2293_Mixed,_incl._Ubiquinone_and_other_terpenoid-quinone_biosynthesis,_and_PD-(D/E)XK_nuclease_superfamily

description:
  Mixed, incl. Ubiquinone and other terpenoid-quinone biosynthesis, and PD-(D/E)XK nuclease superfamily


id: CL:2294
description: Mixed, incl. Menaquinone biosynthesis, and Enolase-like, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2294_Mixed,_incl._Menaquinone_biosynthesis,_and_Enolase-like,_N-terminal


id: CL:2296
description: Menaquinone biosynthesis, and ADC synthase
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2296_Menaquinone_biosynthesis,_and_ADC_synthase


id: CL:2314
description: Mixed, incl. PD-(D/E)XK nuclease superfamily, and Methylthiotransferase, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2314_Mixed,_incl._PD-(D/E)XK_nuclease_superfamily,_and_Methylthiotransferase,_conserved_site


id: CL:2332
description: Mostly uncharacterized, incl. Nucleotidyl transferase, and Tetratricopeptide repeat 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2332_Mostly_uncharacterized,_incl._Nucleotidyl_transferase,_and_Tetratricopeptide_repeat_2


id: CL:2333
description: Mixed, incl. Nucleotidyl transferase, and Tetratricopeptide repeat 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2333_Mixed,_incl._Nucleotidyl_transferase,_and_Tetratricopeptide_repeat_2


id: CL:2344
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2344_Mixed,_incl._Tetrapyrrole_methylase_superfamily,_and_Polysaccharide_biosynthesis_protein,_C-terminal_domain

description:
  Mixed, incl. Tetrapyrrole methylase superfamily, and Polysaccharide biosynthesis protein, C-terminal domain


id: CL:2353
description: Mixed, incl. HDIG domain, and YceI-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2353_Mixed,_incl._HDIG_domain,_and_YceI-like_domain


id: CL:2368
description: Mixed, incl. tRNA threonylcarbamoyladenosine modification, and Alanine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2368_Mixed,_incl._tRNA_threonylcarbamoyladenosine_modification,_and_Alanine_metabolic_process


id: CL:237
description: Cellular amino acid biosynthetic process, and Transsulfuration
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:237_Cellular_amino_acid_biosynthetic_process,_and_Transsulfuration


id: CL:2370
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2370_Mixed,_incl._Putative_MetA-pathway_of_phenol_degradation,_and_Polysaccharide_biosynthesis_protein,_C-terminal_domain

description:
  Mixed, incl. Putative MetA-pathway of phenol degradation, and Polysaccharide biosynthesis protein, C-terminal domain


id: CL:238
description: Cellular amino acid biosynthetic process, and Transsulfuration
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:238_Cellular_amino_acid_biosynthetic_process,_and_Transsulfuration


id: CL:2388
description: tRNA threonylcarbamoyladenosine modification, and Alanine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2388_tRNA_threonylcarbamoyladenosine_modification,_and_Alanine_metabolic_process


id: CL:239
description: Alpha-amino acid biosynthetic process, and Transsulfuration
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:239_Alpha-amino_acid_biosynthetic_process,_and_Transsulfuration


id: CL:2399
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2399_Mostly_uncharacterized,_incl._Putative_auto-transporter_adhesin,_head_GIN_domain,_and_RNA_polymerase_sigma_factor_70,_region_4_type_2

description:
  Mostly uncharacterized, incl. Putative auto-transporter adhesin, head GIN domain, and RNA polymerase sigma factor 70, region 4 type 2


id: CL:240
description: Valine, leucine and isoleucine biosynthesis, and Aspartate family amino acid biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:240_Valine,_leucine_and_isoleucine_biosynthesis,_and_Aspartate_family_amino_acid_biosynthetic_process


id: CL:2400
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2400_Mostly_uncharacterized,_incl._Putative_auto-transporter_adhesin,_head_GIN_domain,_and_RNA_polymerase_sigma_factor_70,_region_4_type_2

description:
  Mostly uncharacterized, incl. Putative auto-transporter adhesin, head GIN domain, and RNA polymerase sigma factor 70, region 4 type 2


id: CL:2402
description: Mixed, incl. Putative auto-transporter adhesin, head GIN domain, and Lipid transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2402_Mixed,_incl._Putative_auto-transporter_adhesin,_head_GIN_domain,_and_Lipid_transporter_activity


id: CL:2404
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2404_Mixed,_incl._Phospholipid_transporter_activity,_and_Putative_auto-transporter_adhesin,_head_GIN_domain

description:
  Mixed, incl. Phospholipid transporter activity, and Putative auto-transporter adhesin, head GIN domain


id: CL:242
description: Aspartate family amino acid biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:242_Aspartate_family_amino_acid_biosynthetic_process


id: CL:2421
description: Mixed, incl. Protein of unknown function DUF1569, and TerB-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2421_Mixed,_incl._Protein_of_unknown_function_DUF1569,_and_TerB-like


id: CL:2436
description: Mixed, incl. Sigma-70, region 4, and Rhodanese Homology Domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2436_Mixed,_incl._Sigma-70,_region_4,_and_Rhodanese_Homology_Domain


id: CL:2447
description: Mixed, incl. Dienelactone hydrolase, and Thioesterase-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2447_Mixed,_incl._Dienelactone_hydrolase,_and_Thioesterase-like_superfamily


id: CL:2456
description: Mixed, incl. Liposaccharide metabolic process, and Lipid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2456_Mixed,_incl._Liposaccharide_metabolic_process,_and_Lipid_transport


id: CL:2457
description: Liposaccharide metabolic process, and Phospholipid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2457_Liposaccharide_metabolic_process,_and_Phospholipid_transport


id: CL:2460
description: Lipid A biosynthesis, and Lipopolysaccharide biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2460_Lipid_A_biosynthesis,_and_Lipopolysaccharide_biosynthesis


id: CL:2474
description: Lipopolysaccharide biosynthesis, and KdsC family
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2474_Lipopolysaccharide_biosynthesis,_and_KdsC_family


id: CL:2491
description: Phospholipid transport, and Sugar-phosphatase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2491_Phospholipid_transport,_and_Sugar-phosphatase_activity


id: CL:2500
description: Mixed, incl. Lipopolysaccharide transport, and Permease LptG/LptF-related
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2500_Mixed,_incl._Lipopolysaccharide_transport,_and_Permease_LptG/LptF-related


id: CL:2502
description: Mixed, incl. Lipoprotein transport, and Chromosome partition
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2502_Mixed,_incl._Lipoprotein_transport,_and_Chromosome_partition


id: CL:2513
description: Permease LptG/LptF-related, and ABC transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2513_Permease_LptG/LptF-related,_and_ABC_transporter


id: CL:2523
description: Mixed, incl. Sulfate permease family, and Von Willebrand factor (vWF) type A domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2523_Mixed,_incl._Sulfate_permease_family,_and_Von_Willebrand_factor_(vWF)_type_A_domain


id: CL:2524
description: Mixed, incl. Von Willebrand factor (vWF) type A domain, and ATPase, AAA-3
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2524_Mixed,_incl._Von_Willebrand_factor_(vWF)_type_A_domain,_and_ATPase,_AAA-3


id: CL:2527
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2527_Mixed,_incl._Von_Willebrand_factor,_type_A,_and_Biological_process_involved_in_interaction_with_host

description:
  Mixed, incl. Von Willebrand factor, type A, and Biological process involved in interaction with host


id: CL:2545
description: Sulfate permease family, and ANK repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2545_Sulfate_permease_family,_and_ANK_repeat


id: CL:2554
description: Mixed, incl. Peptidoglycan metabolic process, and Cell division
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2554_Mixed,_incl._Peptidoglycan_metabolic_process,_and_Cell_division


id: CL:2555
description: Mixed, incl. Peptidoglycan metabolic process, and Cell division
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2555_Mixed,_incl._Peptidoglycan_metabolic_process,_and_Cell_division


id: CL:2556
description: Mixed, incl. Peptidoglycan metabolic process, and Cell division
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2556_Mixed,_incl._Peptidoglycan_metabolic_process,_and_Cell_division


id: CL:2557
description: Mixed, incl. Peptidoglycan biosynthesis, and Cell division
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2557_Mixed,_incl._Peptidoglycan_biosynthesis,_and_Cell_division


id: CL:2558
description: Aminoglycan biosynthetic process, and Cell division
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2558_Aminoglycan_biosynthetic_process,_and_Cell_division


id: CL:2562
description: Cell cycle, and rRNA (cytosine) methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2562_Cell_cycle,_and_rRNA_(cytosine)_methyltransferase_activity


id: CL:2596
description: Mixed, incl. Peptidoglycan glycosyltransferase activity, and MreB/Mbl protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2596_Mixed,_incl._Peptidoglycan_glycosyltransferase_activity,_and_MreB/Mbl_protein


id: CL:2597
description: Peptidoglycan glycosyltransferase activity, and Peptidoglycan binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2597_Peptidoglycan_glycosyltransferase_activity,_and_Peptidoglycan_binding


id: CL:2619
description: Mixed, incl. PASTA domain, and D-Alanine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2619_Mixed,_incl._PASTA_domain,_and_D-Alanine_metabolism


id: CL:2635
description: Mixed, incl. Ami_3, and NlpC/P60 family
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2635_Mixed,_incl._Ami_3,_and_NlpC/P60_family


id: CL:2664
description: Cyanoamino acid metabolism, and D-ala D-ala ligase C-terminus
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2664_Cyanoamino_acid_metabolism,_and_D-ala_D-ala_ligase_C-terminus


id: CL:268
description: Valine, leucine and isoleucine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:268_Valine,_leucine_and_isoleucine_biosynthesis


id: CL:2682
description: Mixed, incl. Core-binding (CB) domain, and Serine-type endopeptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2682_Mixed,_incl._Core-binding_(CB)_domain,_and_Serine-type_endopeptidase_activity


id: CL:2683
description: Mixed, incl. Core-binding (CB) domain, and tRNA-dihydrouridine synthase
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2683_Mixed,_incl._Core-binding_(CB)_domain,_and_tRNA-dihydrouridine_synthase


id: CL:2684
description: Mixed, incl. Peptidase S1, PA clan, and Acetyltransferase (GNAT) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2684_Mixed,_incl._Peptidase_S1,_PA_clan,_and_Acetyltransferase_(GNAT)_domain


id: CL:2693
description: Core-binding (CB) domain, and tRNA-dihydrouridine synthase
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2693_Core-binding_(CB)_domain,_and_tRNA-dihydrouridine_synthase


id: CL:2704
description: Mixed, incl. Peptidase S24-like, and WbqC-like protein family
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2704_Mixed,_incl._Peptidase_S24-like,_and_WbqC-like_protein_family


id: CL:2719
description: Mixed, incl. RuvA domain 2-like, and DNA recombination
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2719_Mixed,_incl._RuvA_domain_2-like,_and_DNA_recombination


id: CL:2720
description: Mixed, incl. Horizontal gene transfer, and Ion channel
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2720_Mixed,_incl._Horizontal_gene_transfer,_and_Ion_channel


id: CL:2722
description: Horizontal gene transfer, and Subunit ChlI of Mg-chelatase
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2722_Horizontal_gene_transfer,_and_Subunit_ChlI_of_Mg-chelatase


id: CL:2734
description: Mixed, incl. Ion channel, and Carboxylic acid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2734_Mixed,_incl._Ion_channel,_and_Carboxylic_acid_transport


id: CL:2746
description: DNA helicase complex, and Sulfur compound catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2746_DNA_helicase_complex,_and_Sulfur_compound_catabolic_process


id: CL:2759
description: Mixed, incl. Methyltransferase domain, and ABC-transporter extension domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2759_Mixed,_incl._Methyltransferase_domain,_and_ABC-transporter_extension_domain


id: CL:2772
description: Mixed, incl. Nucleoside salvage, and Sigma-70, region 4
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2772_Mixed,_incl._Nucleoside_salvage,_and_Sigma-70,_region_4


id: CL:2788
description: Mixed, incl. Bacterial nucleoid, and Nucleotide excision repair
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2788_Mixed,_incl._Bacterial_nucleoid,_and_Nucleotide_excision_repair


id: CL:2790
description: Mixed, incl. DNA ligase activity, and Calcineurin-like phosphoesterase
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2790_Mixed,_incl._DNA_ligase_activity,_and_Calcineurin-like_phosphoesterase


id: CL:2812
description: Mixed, incl. Bacterial nucleoid, and Quinoprotein alcohol dehydrogenase-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2812_Mixed,_incl._Bacterial_nucleoid,_and_Quinoprotein_alcohol_dehydrogenase-like_superfamily


id: CL:2831
description: Mixed, incl. Polysaccharide biosynthetic process, and Glycosyltransferase 2-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2831_Mixed,_incl._Polysaccharide_biosynthetic_process,_and_Glycosyltransferase_2-like


id: CL:2832
description: Mixed, incl. Polysaccharide biosynthetic process, and Glycosyltransferase 2-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2832_Mixed,_incl._Polysaccharide_biosynthetic_process,_and_Glycosyltransferase_2-like


id: CL:2833
description: Mixed, incl. Polysaccharide biosynthetic process, and Glycosyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2833_Mixed,_incl._Polysaccharide_biosynthetic_process,_and_Glycosyltransferase_activity


id: CL:2834
description: Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and Polysaccharide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2834_Mixed,_incl._O-Antigen_nucleotide_sugar_biosynthesis,_and_Polysaccharide_biosynthetic_process


id: CL:2835
description: Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and Glycosyltransferase 2-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2835_Mixed,_incl._O-Antigen_nucleotide_sugar_biosynthesis,_and_Glycosyltransferase_2-like


id: CL:2836
description: Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and Glycosyltransferase 2-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2836_Mixed,_incl._O-Antigen_nucleotide_sugar_biosynthesis,_and_Glycosyltransferase_2-like


id: CL:2837
description: Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and Glycosyl transferase, family 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2837_Mixed,_incl._O-Antigen_nucleotide_sugar_biosynthesis,_and_Glycosyl_transferase,_family_1


id: CL:2839
description: O-Antigen nucleotide sugar biosynthesis, and WbqC-like protein family
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2839_O-Antigen_nucleotide_sugar_biosynthesis,_and_WbqC-like_protein_family


id: CL:2842
description: Polyketide sugar unit biosynthesis, and O-Antigen nucleotide sugar biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2842_Polyketide_sugar_unit_biosynthesis,_and_O-Antigen_nucleotide_sugar_biosynthesis


id: CL:2845
description: Polyketide sugar unit biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2845_Polyketide_sugar_unit_biosynthesis


id: CL:2858
description: Mixed, incl. Beta-eliminating lyase, and WbqC-like protein family
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2858_Mixed,_incl._Beta-eliminating_lyase,_and_WbqC-like_protein_family


id: CL:2871
description: NADP+ binding, and UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2871_NADP+_binding,_and_UDP-glucose/GDP-mannose_dehydrogenase_family,_NAD_binding_domain


id: CL:2882
description: Mixed, incl. Glycosyl transferase, family 1, and Bacterial sugar transferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2882_Mixed,_incl._Glycosyl_transferase,_family_1,_and_Bacterial_sugar_transferase


id: CL:2884
description: Bacterial sugar transferase, and Glycosyl transferase 4-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2884_Bacterial_sugar_transferase,_and_Glycosyl_transferase_4-like


id: CL:289
description: Cysteine metabolic process, and Aminotransferases, class-I, pyridoxal-phosphate-binding site
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:289_Cysteine_metabolic_process,_and_Aminotransferases,_class-I,_pyridoxal-phosphate-binding_site


id: CL:290
description: Cysteine metabolic process, and Ammonia-lyase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:290_Cysteine_metabolic_process,_and_Ammonia-lyase_activity


id: CL:2900
description: Glycosyl transferase, family 1, and Short chain dehydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2900_Glycosyl_transferase,_family_1,_and_Short_chain_dehydrogenase


id: CL:2914
description: Mixed, incl. Glycosyltransferase 2-like, and Extracellular polysaccharide metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2914_Mixed,_incl._Glycosyltransferase_2-like,_and_Extracellular_polysaccharide_metabolic_process


id: CL:2915
description: Mixed, incl. Glycosyltransferase 2-like, and Extracellular polysaccharide metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2915_Mixed,_incl._Glycosyltransferase_2-like,_and_Extracellular_polysaccharide_metabolic_process


id: CL:2916
description: Mixed, incl. Glycosyltransferase like family 2, and Methyltransferase FkbM
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2916_Mixed,_incl._Glycosyltransferase_like_family_2,_and_Methyltransferase_FkbM


id: CL:292
description: Cysteine synthase activity, and Carbon-sulfur lyase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:292_Cysteine_synthase_activity,_and_Carbon-sulfur_lyase_activity


id: CL:2920
description: Mixed, incl. Methyltransferase FkbM, and Glycosyltransferase like family 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2920_Mixed,_incl._Methyltransferase_FkbM,_and_Glycosyltransferase_like_family_2


id: CL:2923
description: Glycosyltransferase like family 2, and Glycosyl transferase family 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2923_Glycosyltransferase_like_family_2,_and_Glycosyl_transferase_family_2


id: CL:2946
description: Polysaccharide transport, and Peptidyl-tyrosine modification
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2946_Polysaccharide_transport,_and_Peptidyl-tyrosine_modification


id: CL:2958
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2958_Exopolysaccharide_biosynthesis_polyprenyl_glycosylphosphotransferase,_and_Glycosyl_transferases_group_1

description:
  Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase, and Glycosyl transferases group 1


id: CL:2968
description: Mixed, incl. DegT/DnrJ/EryC1/StrS aminotransferase family, and Aminoacyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2968_Mixed,_incl._DegT/DnrJ/EryC1/StrS_aminotransferase_family,_and_Aminoacyltransferase_activity


id: CL:2985
description: Mixed, incl. RmlD-like substrate binding domain, and Polysaccharide biosynthesis protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:2985_Mixed,_incl._RmlD-like_substrate_binding_domain,_and_Polysaccharide_biosynthesis_protein


id: CL:3003
description: Mixed, incl. Glycosyltransferase 2-like, and Glycosyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3003_Mixed,_incl._Glycosyltransferase_2-like,_and_Glycosyltransferase_activity


id: CL:3005
description: Mixed, incl. Glycosyltransferase 2-like, and Glycosyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3005_Mixed,_incl._Glycosyltransferase_2-like,_and_Glycosyltransferase_activity


id: CL:3006
description: Mixed, incl. Glycosyl transferase, family 1, and Glycosyltransferase 2-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3006_Mixed,_incl._Glycosyl_transferase,_family_1,_and_Glycosyltransferase_2-like


id: CL:3007
description: Mixed, incl. Glycosyl transferase, family 1, and Glycosyltransferase 2-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3007_Mixed,_incl._Glycosyl_transferase,_family_1,_and_Glycosyltransferase_2-like


id: CL:3009
description: Mostly uncharacterized, incl. Protein insertion into membrane, and Dihydroorotate dehydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3009_Mostly_uncharacterized,_incl._Protein_insertion_into_membrane,_and_Dihydroorotate_dehydrogenase


id: CL:3010
description: Mostly uncharacterized, incl. Dihydroorotate dehydrogenase, and Polyprenyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3010_Mostly_uncharacterized,_incl._Dihydroorotate_dehydrogenase,_and_Polyprenyltransferase_activity


id: CL:3012
description: Mixed, incl. Concanavalin A-like lectin/glucanase domain superfamily, and Heme metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3012_Mixed,_incl._Concanavalin_A-like_lectin/glucanase_domain_superfamily,_and_Heme_metabolic_process


id: CL:3033
description: Mixed, incl. Protein insertion into membrane, and Long-chain fatty acid transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3033_Mixed,_incl._Protein_insertion_into_membrane,_and_Long-chain_fatty_acid_transporter_activity


id: CL:3050
description: Mixed, incl. Glycosyl transferase, family 1, and Biosynthesis of ansamycins
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3050_Mixed,_incl._Glycosyl_transferase,_family_1,_and_Biosynthesis_of_ansamycins


id: CL:3052
description: Mixed, incl. Glycosyl transferase, family 1, and Glycosyl transferase family 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3052_Mixed,_incl._Glycosyl_transferase,_family_1,_and_Glycosyl_transferase_family_2


id: CL:3054
description: Mixed, incl. Glycosyltransferase Family 4, and Glycosyl transferases group 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3054_Mixed,_incl._Glycosyltransferase_Family_4,_and_Glycosyl_transferases_group_1


id: CL:3090
description: Mixed, incl. Sulfate transport, and Endonuclease/exonuclease/phosphatase
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3090_Mixed,_incl._Sulfate_transport,_and_Endonuclease/exonuclease/phosphatase


id: CL:3099
description: Mixed, incl. Endonuclease I, and PKD/Chitinase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3099_Mixed,_incl._Endonuclease_I,_and_PKD/Chitinase_domain


id: CL:3100
description: Mixed, incl. PKD/Chitinase domain, and Peptidase S1, PA clan, chymotrypsin-like fold
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3100_Mixed,_incl._PKD/Chitinase_domain,_and_Peptidase_S1,_PA_clan,_chymotrypsin-like_fold


id: CL:3109
description: Mixed, incl. Endonuclease I, and Family of unknown function DUF5686
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3109_Mixed,_incl._Endonuclease_I,_and_Family_of_unknown_function_DUF5686


id: CL:312
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:312_Aminotransferases,_class-I,_pyridoxal-phosphate-binding_site,_and_DegT/DnrJ/EryC1/StrS_aminotransferase_family

description:
  Aminotransferases, class-I, pyridoxal-phosphate-binding site, and DegT/DnrJ/EryC1/StrS aminotransferase family


id: CL:3131
description: Mixed, incl. Cell gliding, and Methyltransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3131_Mixed,_incl._Cell_gliding,_and_Methyltransferase_domain


id: CL:3141
description: Mixed, incl. Mannosylation, and Glycosyltransferase like family 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3141_Mixed,_incl._Mannosylation,_and_Glycosyltransferase_like_family_2


id: CL:3143
description: Mixed, incl. Mannosylation, and Protein of unknown function DUF4199
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3143_Mixed,_incl._Mannosylation,_and_Protein_of_unknown_function_DUF4199


id: CL:3158
description: Mixed, incl. Mannosylation, and lipid-A-disaccharide synthase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3158_Mixed,_incl._Mannosylation,_and_lipid-A-disaccharide_synthase_activity


id: CL:3168
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3168_Mostly_uncharacterized,_incl._D-isomer_specific_2-hydroxyacid_dehydrogenase,_catalytic_domain,_and_acyl-CoA_metabolic_process

description:
  Mostly uncharacterized, incl. D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain, and acyl-CoA metabolic process


id: CL:3169
description: Mixed, incl. D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain, and TM2 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3169_Mixed,_incl._D-isomer_specific_2-hydroxyacid_dehydrogenase,_catalytic_domain,_and_TM2_domain


id: CL:3171
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3171_D-isomer_specific_2-hydroxyacid_dehydrogenase,_catalytic_domain,_and_Aminotransferase_class-V,_pyridoxal-phosphate_binding_site

description:
  D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain, and Aminotransferase class-V, pyridoxal-phosphate binding site


id: CL:3187
description: Mixed, incl. TM2 domain, and Vicinal oxygen chelate (VOC) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3187_Mixed,_incl._TM2_domain,_and_Vicinal_oxygen_chelate_(VOC)_domain


id: CL:3197
description: Mixed, incl. Periplasmic binding protein, and FecCD transport family
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3197_Mixed,_incl._Periplasmic_binding_protein,_and_FecCD_transport_family


id: CL:3217
description: Mixed, incl. Oxidoreductase activity, acting on a sulfur group of donors, and Thioredoxin domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3217_Mixed,_incl._Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_and_Thioredoxin_domain


id: CL:3219
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3219_Mixed,_incl._Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_disulfide_as_acceptor,_and_Cytochrome_complex_assembly

description:
  Mixed, incl. Oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor, and Cytochrome complex assembly


id: CL:3220
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3220_Mixed,_incl._Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_disulfide_as_acceptor,_and_Thioredoxin-like_fold

description:
  Mixed, incl. Oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor, and Thioredoxin-like fold


id: CL:3222
description: Oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3222_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_disulfide_as_acceptor


id: CL:324
description: Phenylalanine, tyrosine and tryptophan biosynthesis, and Histidine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:324_Phenylalanine,_tyrosine_and_tryptophan_biosynthesis,_and_Histidine_biosynthesis


id: CL:3243
description: Mixed, incl. Thioredoxin-like, and NAD metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3243_Mixed,_incl._Thioredoxin-like,_and_NAD_metabolic_process


id: CL:325
description: Histidine biosynthesis, and Tryptophan biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:325_Histidine_biosynthesis,_and_Tryptophan_biosynthesis


id: CL:3262
description: Mixed, incl. Peroxiredoxin-like 1, and AhpC/TSA family
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3262_Mixed,_incl._Peroxiredoxin-like_1,_and_AhpC/TSA_family


id: CL:3278
description: Mixed, incl. Phosphorelay signal transduction system, and Regulation of RNA metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3278_Mixed,_incl._Phosphorelay_signal_transduction_system,_and_Regulation_of_RNA_metabolic_process


id: CL:3279
description: Mixed, incl. Phosphorelay signal transduction system, and Regulation of RNA metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3279_Mixed,_incl._Phosphorelay_signal_transduction_system,_and_Regulation_of_RNA_metabolic_process


id: CL:328
description: Tryptophan biosynthesis, and Anthranilate synthase component I-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:328_Tryptophan_biosynthesis,_and_Anthranilate_synthase_component_I-like


id: CL:3280
description: Mixed, incl. Phosphorelay signal transduction system, and Regulation of RNA metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3280_Mixed,_incl._Phosphorelay_signal_transduction_system,_and_Regulation_of_RNA_metabolic_process


id: CL:3281
description: Mixed, incl. Phosphorelay signal transduction system, and cheY-homologous receiver domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3281_Mixed,_incl._Phosphorelay_signal_transduction_system,_and_cheY-homologous_receiver_domain


id: CL:3282
description: Mixed, incl. Phosphorelay signal transduction system, and cheY-homologous receiver domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3282_Mixed,_incl._Phosphorelay_signal_transduction_system,_and_cheY-homologous_receiver_domain


id: CL:3284
description: Phosphorelay signal transduction system, and RNA polymerase sigma factor 54 interaction domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3284_Phosphorelay_signal_transduction_system,_and_RNA_polymerase_sigma_factor_54_interaction_domain


id: CL:3286
description: Phosphorelay signal transduction system, and RNA polymerase sigma factor 54 interaction domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3286_Phosphorelay_signal_transduction_system,_and_RNA_polymerase_sigma_factor_54_interaction_domain


id: CL:3287
description: Phosphorelay signal transduction system, and RNA polymerase sigma factor 54 interaction domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3287_Phosphorelay_signal_transduction_system,_and_RNA_polymerase_sigma_factor_54_interaction_domain


id: CL:3289
description: Histidine kinase domain, and Signal transduction response regulator, C-terminal effector
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3289_Histidine_kinase_domain,_and_Signal_transduction_response_regulator,_C-terminal_effector


id: CL:3293
description: Histidine kinase domain, and OmpR/PhoB-type DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3293_Histidine_kinase_domain,_and_OmpR/PhoB-type_DNA-binding_domain


id: CL:3349
description: Mixed, incl. Flagellar assembly, and Transcriptional regulatory protein WalR-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3349_Mixed,_incl._Flagellar_assembly,_and_Transcriptional_regulatory_protein_WalR-like


id: CL:3358
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3358_Mixed,_incl._Phosphorelay_signal_transduction_system,_and_Glycosyl_hydrolases_family_2,_TIM_barrel_domain

description:
  Mixed, incl. Phosphorelay signal transduction system, and Glycosyl hydrolases family 2, TIM barrel domain


id: CL:3360
description: Mixed, incl. Glycosyl hydrolases family 2, TIM barrel domain, and Regulation of growth
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3360_Mixed,_incl._Glycosyl_hydrolases_family_2,_TIM_barrel_domain,_and_Regulation_of_growth


id: CL:3376
description: Mixed, incl. PAC motif, and Hpt domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3376_Mixed,_incl._PAC_motif,_and_Hpt_domain


id: CL:3389
description: Mixed, incl. Biotin metabolic process, and Tetrapyrrole catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3389_Mixed,_incl._Biotin_metabolic_process,_and_Tetrapyrrole_catabolic_process


id: CL:3391
description: Biotin metabolic process, and Putative prokaryotic signal transducing protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3391_Biotin_metabolic_process,_and_Putative_prokaryotic_signal_transducing_protein


id: CL:3415
description: Mixed, incl. Fluoride transmembrane transport, and Fibronectin type III
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3415_Mixed,_incl._Fluoride_transmembrane_transport,_and_Fibronectin_type_III


id: CL:3427
description: LytTR DNA-binding domain, and Histidine kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3427_LytTR_DNA-binding_domain,_and_Histidine_kinase


id: CL:3429
description: Transcriptional regulatory protein LytR-like, and Histidine kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3429_Transcriptional_regulatory_protein_LytR-like,_and_Histidine_kinase


id: CL:3431
description: Transcriptional regulatory protein LytR-like, and Histidine kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3431_Transcriptional_regulatory_protein_LytR-like,_and_Histidine_kinase


id: CL:3462
description: Mixed, incl. ABC transporter, TroCD-like, and Protein binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3462_Mixed,_incl._ABC_transporter,_TroCD-like,_and_Protein_binding


id: CL:3463
description: Mostly uncharacterized, incl. SPFH domain / Band 7 family, and Protein of unknown function DUF4870
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3463_Mostly_uncharacterized,_incl._SPFH_domain_/_Band_7_family,_and_Protein_of_unknown_function_DUF4870


id: CL:3466
description: Mixed, incl. SPFH domain / Band 7 family, and Cro/C1-type helix-turn-helix domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3466_Mixed,_incl._SPFH_domain_/_Band_7_family,_and_Cro/C1-type_helix-turn-helix_domain


id: CL:3479
description: Mixed, incl. Protein of unknown function DUF4870, and Transcription regulator PadR, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3479_Mixed,_incl._Protein_of_unknown_function_DUF4870,_and_Transcription_regulator_PadR,_N-terminal


id: CL:3490
description: ABC transporter, TroCD-like, and Ferrous iron transporter FeoA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3490_ABC_transporter,_TroCD-like,_and_Ferrous_iron_transporter_FeoA_domain


id: CL:3506
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3506_Mixed,_incl._Adenosine_deaminase_activity,_and_Glyoxalase/Bleomycin_resistance_protein/Dioxygenase_superfamily

description:
  Mixed, incl. Adenosine deaminase activity, and Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily


id: CL:3521
description: Mixed, incl. Protein of unknown function DUF4230, and RDD family
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3521_Mixed,_incl._Protein_of_unknown_function_DUF4230,_and_RDD_family


id: CL:3533
description: Mostly uncharacterized, incl. Tryptophan metabolism, and Polyphosphate kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3533_Mostly_uncharacterized,_incl._Tryptophan_metabolism,_and_Polyphosphate_kinase_activity


id: CL:3534
description: Mixed, incl. Aromatic amino acid family catabolic process, and Peptidase M23
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3534_Mixed,_incl._Aromatic_amino_acid_family_catabolic_process,_and_Peptidase_M23


id: CL:3536
description: Mixed, incl. Amine catabolic process, and RmlC-like cupin domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3536_Mixed,_incl._Amine_catabolic_process,_and_RmlC-like_cupin_domain_superfamily


id: CL:3538
description: Mixed, incl. Pirin, and Major facilitator superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3538_Mixed,_incl._Pirin,_and_Major_facilitator_superfamily


id: CL:3570
description: Mixed, incl. Peptidase M23, and Dioxygenase
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3570_Mixed,_incl._Peptidase_M23,_and_Dioxygenase


id: CL:3572
description: Dioxygenase, and TonB-dependent receptor-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3572_Dioxygenase,_and_TonB-dependent_receptor-like


id: CL:358
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:358_Chorismate_metabolic_process,_and_Aromatic_amino_acid_family_biosynthetic_process,_prephenate_pathway

description:
  Chorismate metabolic process, and Aromatic amino acid family biosynthetic process, prephenate pathway


id: CL:3588
description: Peptidase M23, and Retropepsin-like domain, bacterial
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3588_Peptidase_M23,_and_Retropepsin-like_domain,_bacterial


id: CL:3599
description: Mixed, incl. Polyphosphate kinase activity, and Sulfur metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3599_Mixed,_incl._Polyphosphate_kinase_activity,_and_Sulfur_metabolism


id: CL:3601
description: Mixed, incl. Polyphosphate kinase activity, and Aldehyde biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3601_Mixed,_incl._Polyphosphate_kinase_activity,_and_Aldehyde_biosynthetic_process


id: CL:3622
description: Mixed, incl. Carboxypeptidase Q, and Xenobiotic transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3622_Mixed,_incl._Carboxypeptidase_Q,_and_Xenobiotic_transport


id: CL:3636
description: Mixed, incl. tRNA processing, and Thiamine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3636_Mixed,_incl._tRNA_processing,_and_Thiamine_metabolism


id: CL:3637
description: Mixed, incl. MetI-like superfamily, and Endonuclease
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3637_Mixed,_incl._MetI-like_superfamily,_and_Endonuclease


id: CL:3638
description: Mixed, incl. MetI-like superfamily, and RNA 3-end processing
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3638_Mixed,_incl._MetI-like_superfamily,_and_RNA_3-end_processing


id: CL:3640
description: Mixed, incl. MetI-like superfamily, and tRNA-dihydrouridine synthase
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3640_Mixed,_incl._MetI-like_superfamily,_and_tRNA-dihydrouridine_synthase


id: CL:3663
description: Mixed, incl. Cell gliding, and Sporulation
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3663_Mixed,_incl._Cell_gliding,_and_Sporulation


id: CL:3678
description: Mixed, incl. Thiamine metabolism, and Domain of unknown function DUF3857
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3678_Mixed,_incl._Thiamine_metabolism,_and_Domain_of_unknown_function_DUF3857


id: CL:3680
description: Mixed, incl. Domain of unknown function DUF3857, and Thiamine diphosphate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3680_Mixed,_incl._Domain_of_unknown_function_DUF3857,_and_Thiamine_diphosphate_metabolic_process


id: CL:3694
description: Mixed, incl. Queuosine biosynthesis, and 4Fe-4S single cluster domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3694_Mixed,_incl._Queuosine_biosynthesis,_and_4Fe-4S_single_cluster_domain


id: CL:3710
description: Mixed, incl. Starch and sucrose metabolism, and Quorum sensing
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3710_Mixed,_incl._Starch_and_sucrose_metabolism,_and_Quorum_sensing


id: CL:3711
description: Mixed, incl. Quorum sensing, and Outer membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3711_Mixed,_incl._Quorum_sensing,_and_Outer_membrane


id: CL:3712
description: Mixed, incl. Quorum sensing, and Outer membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3712_Mixed,_incl._Quorum_sensing,_and_Outer_membrane


id: CL:3713
description: Mixed, incl. Quorum sensing, and Pectin lyase fold
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3713_Mixed,_incl._Quorum_sensing,_and_Pectin_lyase_fold


id: CL:3714
description: Mixed, incl. TSP type-3 repeat, and Pectin lyase fold
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3714_Mixed,_incl._TSP_type-3_repeat,_and_Pectin_lyase_fold


id: CL:3715
description: Mixed, incl. TSP type-3 repeat, and Secretion system C-terminal sorting domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3715_Mixed,_incl._TSP_type-3_repeat,_and_Secretion_system_C-terminal_sorting_domain


id: CL:3716
description: Mixed, incl. TSP type-3 repeat, and Secretion system C-terminal sorting domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3716_Mixed,_incl._TSP_type-3_repeat,_and_Secretion_system_C-terminal_sorting_domain


id: CL:3717
description: Mixed, incl. TSP type-3 repeat, and Secretion system C-terminal sorting domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3717_Mixed,_incl._TSP_type-3_repeat,_and_Secretion_system_C-terminal_sorting_domain


id: CL:3718
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3718_Mixed,_incl._Secretion_system_C-terminal_sorting_domain,_and_TonB-dependent_outer_membrane_protein_SusC/RagA,_conserved_site

description:
  Mixed, incl. Secretion system C-terminal sorting domain, and TonB-dependent outer membrane protein SusC/RagA, conserved site


id: CL:3719
description: Mixed, incl. Secretion system C-terminal sorting domain, and Tricorn protease
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3719_Mixed,_incl._Secretion_system_C-terminal_sorting_domain,_and_Tricorn_protease


id: CL:3721
description: Mixed, incl. Tricorn protease, and YadA head domain repeat (2 copies)
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3721_Mixed,_incl._Tricorn_protease,_and_YadA_head_domain_repeat_(2_copies)


id: CL:3738
description: Mixed, incl. ELWxxDGT repeat, and Superoxide dismutase-like, copper/zinc binding domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3738_Mixed,_incl._ELWxxDGT_repeat,_and_Superoxide_dismutase-like,_copper/zinc_binding_domain_superfamily


id: CL:3750
description: Mixed, incl. Negative regulation of catalytic activity, and Parallel beta-helix repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3750_Mixed,_incl._Negative_regulation_of_catalytic_activity,_and_Parallel_beta-helix_repeat


id: CL:3759
description: Mixed, incl. TSP type-3 repeat, and Aspartic peptidase, active site
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3759_Mixed,_incl._TSP_type-3_repeat,_and_Aspartic_peptidase,_active_site


id: CL:3761
description: TSP type-3 repeat, and Aspartic peptidase, active site
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3761_TSP_type-3_repeat,_and_Aspartic_peptidase,_active_site


id: CL:378
description: Glutamine family amino acid biosynthetic process, and Bacterial exopeptidase dimerisation domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:378_Glutamine_family_amino_acid_biosynthetic_process,_and_Bacterial_exopeptidase_dimerisation_domain


id: CL:3783
description: Mixed, incl. RNA methyltransferase TrmH family, and Autotransporter beta-domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3783_Mixed,_incl._RNA_methyltransferase_TrmH_family,_and_Autotransporter_beta-domain_superfamily


id: CL:3799
description: Mixed, incl. Sterol-sensing domain, and YadA head domain repeat (2 copies)
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3799_Mixed,_incl._Sterol-sensing_domain,_and_YadA_head_domain_repeat_(2_copies)


id: CL:3814
description: Mixed, incl. Pectin lyase fold, and Sphingolipid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3814_Mixed,_incl._Pectin_lyase_fold,_and_Sphingolipid_metabolism


id: CL:3817
description: Mixed, incl. Sphingolipid metabolism, and Pectin lyase fold
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3817_Mixed,_incl._Sphingolipid_metabolism,_and_Pectin_lyase_fold


id: CL:3840
description: Mixed, incl. GLPGLI family protein, and Winged helix DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3840_Mixed,_incl._GLPGLI_family_protein,_and_Winged_helix_DNA-binding_domain


id: CL:3856
description: Mostly uncharacterized, incl. ABC-type transporter activity, and Tricorn protease
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3856_Mostly_uncharacterized,_incl._ABC-type_transporter_activity,_and_Tricorn_protease


id: CL:3858
description: Mixed, incl. Winged helix DNA-binding domain, and ABC transporters
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3858_Mixed,_incl._Winged_helix_DNA-binding_domain,_and_ABC_transporters


id: CL:3875
description: Mixed, incl. Peptidase S9A, N-terminal domain, and Vitamin transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3875_Mixed,_incl._Peptidase_S9A,_N-terminal_domain,_and_Vitamin_transport


id: CL:3887
description: Mixed, incl. ABC-2 family transporter protein, and PKD domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3887_Mixed,_incl._ABC-2_family_transporter_protein,_and_PKD_domain_superfamily


id: CL:3888
description: Mixed, incl. ABC-2 family transporter protein, and PKD domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3888_Mixed,_incl._ABC-2_family_transporter_protein,_and_PKD_domain_superfamily


id: CL:3889
description: Mixed, incl. PKD domain superfamily, and Cell aggregation
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3889_Mixed,_incl._PKD_domain_superfamily,_and_Cell_aggregation


id: CL:3891
description: PKD domain superfamily, and ABC-2 family transporter protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3891_PKD_domain_superfamily,_and_ABC-2_family_transporter_protein


id: CL:3909
description: Mixed, incl. Tetrapyrrole catabolic process, and ABC-2 family transporter protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3909_Mixed,_incl._Tetrapyrrole_catabolic_process,_and_ABC-2_family_transporter_protein


id: CL:3925
description: Mixed, incl. Acetyltransferase (GNAT) domain, and Mtb iron assimilation by chelation
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3925_Mixed,_incl._Acetyltransferase_(GNAT)_domain,_and_Mtb_iron_assimilation_by_chelation


id: CL:3934
description: Mixed, incl. Starch and sucrose metabolism, and Extracellular region
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3934_Mixed,_incl._Starch_and_sucrose_metabolism,_and_Extracellular_region


id: CL:3935
description: Starch and sucrose metabolism, and Starch binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3935_Starch_and_sucrose_metabolism,_and_Starch_binding


id: CL:3938
description: Starch and sucrose metabolism, and Starch binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3938_Starch_and_sucrose_metabolism,_and_Starch_binding


id: CL:3939
description: Glucan metabolic process, and Starch and sucrose metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3939_Glucan_metabolic_process,_and_Starch_and_sucrose_metabolism


id: CL:3940
description: Mixed, incl. Glucan metabolic process, and Amylase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3940_Mixed,_incl._Glucan_metabolic_process,_and_Amylase_activity


id: CL:3943
description: Mixed, incl. Amylase activity, and MFS/sugar transport protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3943_Mixed,_incl._Amylase_activity,_and_MFS/sugar_transport_protein


id: CL:396
description: Proline biosynthetic process, and Ureohydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:396_Proline_biosynthetic_process,_and_Ureohydrolase


id: CL:3961
description: Mixed, incl. Glycogen metabolic process, and Glycosyl hydrolase, family 13, catalytic domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3961_Mixed,_incl._Glycogen_metabolic_process,_and_Glycosyl_hydrolase,_family_13,_catalytic_domain


id: CL:3963
description: Glycogen metabolic process, and Alpha-glucan metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3963_Glycogen_metabolic_process,_and_Alpha-glucan_metabolic_process


id: CL:3982
description: Mixed, incl. pfkB family carbohydrate kinase, and Glutathione oxidoreductase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:3982_Mixed,_incl._pfkB_family_carbohydrate_kinase,_and_Glutathione_oxidoreductase_activity


id: CL:4002
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4002_Mixed,_incl._Hydrolase_activity,_hydrolyzing_O-glycosyl_compounds,_and_Galactose-binding-like_domain_superfamily

description:
  Mixed, incl. Hydrolase activity, hydrolyzing O-glycosyl compounds, and Galactose-binding-like domain superfamily


id: CL:4004
description: Hydrolase activity, hydrolyzing O-glycosyl compounds, and Galactose-binding-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4004_Hydrolase_activity,_hydrolyzing_O-glycosyl_compounds,_and_Galactose-binding-like_domain_superfamily


id: CL:4006
description: Mixed, incl. Beta-glucan metabolic process, and Glycoside hydrolase family 16
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4006_Mixed,_incl._Beta-glucan_metabolic_process,_and_Glycoside_hydrolase_family_16


id: CL:4009
description: Beta-glucan metabolic process, and Other glycan degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4009_Beta-glucan_metabolic_process,_and_Other_glycan_degradation


id: CL:4031
description: Mixed, incl. Transcription regulator LuxR, C-terminal, and PKD domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4031_Mixed,_incl._Transcription_regulator_LuxR,_C-terminal,_and_PKD_domain


id: CL:4046
description: Mixed, incl. AI-2E family transporter, and Proteolipid membrane potential modulator
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4046_Mixed,_incl._AI-2E_family_transporter,_and_Proteolipid_membrane_potential_modulator


id: CL:4057
description: Mixed, incl. Sulfuric ester hydrolase activity, and C-type lectin fold
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4057_Mixed,_incl._Sulfuric_ester_hydrolase_activity,_and_C-type_lectin_fold


id: CL:4059
description: Mixed, incl. Sulfuric ester hydrolase activity, and C-type lectin fold
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4059_Mixed,_incl._Sulfuric_ester_hydrolase_activity,_and_C-type_lectin_fold


id: CL:4060
description: Sulfuric ester hydrolase activity, and Glycoside hydrolase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4060_Sulfuric_ester_hydrolase_activity,_and_Glycoside_hydrolase_superfamily


id: CL:4062
description: Sulfatase, N-terminal, and Xylan metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4062_Sulfatase,_N-terminal,_and_Xylan_metabolic_process


id: CL:4080
description: Mixed, incl. Sulfatase, conserved site, and Fibronectin type III-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4080_Mixed,_incl._Sulfatase,_conserved_site,_and_Fibronectin_type_III-like_domain


id: CL:4109
description: Mixed, incl. Cell adhesion, and Nucleoside transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4109_Mixed,_incl._Cell_adhesion,_and_Nucleoside_transport


id: CL:412
description: Microbial metabolism in diverse environments, and Fatty acid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:412_Microbial_metabolism_in_diverse_environments,_and_Fatty_acid_metabolism


id: CL:4122
description: Mostly uncharacterized, incl. Peptidase M56, and Six-bladed beta-propeller, TolB-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4122_Mostly_uncharacterized,_incl._Peptidase_M56,_and_Six-bladed_beta-propeller,_TolB-like


id: CL:4123
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4123_Mostly_uncharacterized,_incl._Six-bladed_beta-propeller,_TolB-like,_and_Calcineurin-like_phosphoesterase

description:
  Mostly uncharacterized, incl. Six-bladed beta-propeller, TolB-like, and Calcineurin-like phosphoesterase


id: CL:4125
description: Mixed, incl. SdiA-regulated, and Calcineurin-like phosphoesterase
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4125_Mixed,_incl._SdiA-regulated,_and_Calcineurin-like_phosphoesterase


id: CL:4129
description: Mixed, incl. RDD family, and Sporulation
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4129_Mixed,_incl._RDD_family,_and_Sporulation


id: CL:413
description: Microbial metabolism in diverse environments, and Fatty acid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:413_Microbial_metabolism_in_diverse_environments,_and_Fatty_acid_metabolism


id: CL:414
description: Microbial metabolism in diverse environments, and Fatty acid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:414_Microbial_metabolism_in_diverse_environments,_and_Fatty_acid_metabolism


id: CL:4142
description: Calcineurin-like phosphoesterase, and SdiA-regulated
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4142_Calcineurin-like_phosphoesterase,_and_SdiA-regulated


id: CL:415
description: Microbial metabolism in diverse environments, and Valine, leucine and isoleucine degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:415_Microbial_metabolism_in_diverse_environments,_and_Valine,_leucine_and_isoleucine_degradation


id: CL:4154
description: Mixed, incl. ELWxxDGT repeat, and Protein of unknown function DUF421
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4154_Mixed,_incl._ELWxxDGT_repeat,_and_Protein_of_unknown_function_DUF421


id: CL:4156
description: Mixed, incl. ELWxxDGT repeat, and SusD-like, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4156_Mixed,_incl._ELWxxDGT_repeat,_and_SusD-like,_N-terminal


id: CL:416
description: Carbon metabolism, and Valine, leucine and isoleucine degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:416_Carbon_metabolism,_and_Valine,_leucine_and_isoleucine_degradation


id: CL:4176
description: Mixed, incl. Peptidase M56, and Penicillinase repressor
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4176_Mixed,_incl._Peptidase_M56,_and_Penicillinase_repressor


id: CL:4178
description: Mixed, incl. Peptidase M56, and Penicillinase repressor
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4178_Mixed,_incl._Peptidase_M56,_and_Penicillinase_repressor


id: CL:418
description: Mixed, incl. Citrate cycle (TCA cycle), and Valine, leucine and isoleucine degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:418_Mixed,_incl._Citrate_cycle_(TCA_cycle),_and_Valine,_leucine_and_isoleucine_degradation


id: CL:4180
description: Peptidase M56, and Penicillinase repressor
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4180_Peptidase_M56,_and_Penicillinase_repressor


id: CL:419
description: Citrate cycle (TCA cycle), and Alanine, aspartate and glutamate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:419_Citrate_cycle_(TCA_cycle),_and_Alanine,_aspartate_and_glutamate_metabolism


id: CL:4192
description: Mixed, incl. Cytochrome c, and Glucose/Sorbosone dehydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4192_Mixed,_incl._Cytochrome_c,_and_Glucose/Sorbosone_dehydrogenase


id: CL:420
description: Citrate cycle (TCA cycle), and Dehydrogenase E1 component
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:420_Citrate_cycle_(TCA_cycle),_and_Dehydrogenase_E1_component


id: CL:4205
description: Cro/C1-type helix-turn-helix domain, and Outer membrane protein beta-barrel domain 3
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4205_Cro/C1-type_helix-turn-helix_domain,_and_Outer_membrane_protein_beta-barrel_domain_3


id: CL:421
description: Citrate cycle (TCA cycle), and Dehydrogenase E1 component
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:421_Citrate_cycle_(TCA_cycle),_and_Dehydrogenase_E1_component


id: CL:4220
description: Mixed, incl. Nitronate monooxygenase, and Protein of unknown function DUF1569
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4220_Mixed,_incl._Nitronate_monooxygenase,_and_Protein_of_unknown_function_DUF1569


id: CL:423
description: Dehydrogenase, E1 component, and Dihydrolipoyl dehydrogenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:423_Dehydrogenase,_E1_component,_and_Dihydrolipoyl_dehydrogenase_activity


id: CL:4236
description: Mixed, incl. Periplasmic space, and Proteolysis
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4236_Mixed,_incl._Periplasmic_space,_and_Proteolysis


id: CL:4237
description: Mostly uncharacterized, incl. Periplasmic space, and RimK, PreATP-grasp domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4237_Mostly_uncharacterized,_incl._Periplasmic_space,_and_RimK,_PreATP-grasp_domain


id: CL:4238
description: Mostly uncharacterized, incl. Periplasmic space, and Peptidase M13
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4238_Mostly_uncharacterized,_incl._Periplasmic_space,_and_Peptidase_M13


id: CL:4239
description: Mixed, incl. Periplasmic space, and Peptidase M13
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4239_Mixed,_incl._Periplasmic_space,_and_Peptidase_M13


id: CL:4241
description: Mixed, incl. Protein of unknown function DUF2490, and Alkylbase DNA N-glycosylase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4241_Mixed,_incl._Protein_of_unknown_function_DUF2490,_and_Alkylbase_DNA_N-glycosylase_activity


id: CL:425
description: acetyl-CoA biosynthetic process from pyruvate, and Dehydrogenase E1 component
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:425_acetyl-CoA_biosynthetic_process_from_pyruvate,_and_Dehydrogenase_E1_component


id: CL:4262
description: Mixed, incl. Carbohydrate-binding-like fold, and Protein transport across the cell outer membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4262_Mixed,_incl._Carbohydrate-binding-like_fold,_and_Protein_transport_across_the_cell_outer_membrane


id: CL:4277
description: Mixed, incl. Dienelactone hydrolase family, and Phosphate acyltransferases
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4277_Mixed,_incl._Dienelactone_hydrolase_family,_and_Phosphate_acyltransferases


id: CL:4289
description: RimK, PreATP-grasp domain, and Succinylglutamate desuccinylase/aspartoacylase
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4289_RimK,_PreATP-grasp_domain,_and_Succinylglutamate_desuccinylase/aspartoacylase


id: CL:4298
description: Mixed, incl. Aminopeptidase activity, and Antiporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4298_Mixed,_incl._Aminopeptidase_activity,_and_Antiporter_activity


id: CL:4300
description: Mostly uncharacterized, incl. Cation efflux family, and RNA 5-end processing
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4300_Mostly_uncharacterized,_incl._Cation_efflux_family,_and_RNA_5-end_processing


id: CL:4304
description: Mixed, incl. Sodium/solute symporter superfamily, and Blockage of phagosome acidification
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4304_Mixed,_incl._Sodium/solute_symporter_superfamily,_and_Blockage_of_phagosome_acidification


id: CL:4331
description: Mixed, incl. Thioredoxin-like, and Peptidase S9, serine active site
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4331_Mixed,_incl._Thioredoxin-like,_and_Peptidase_S9,_serine_active_site


id: CL:4347
description: Mostly uncharacterized, incl. Acyl-CoA N-acyltransferase, and Citrate synthase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4347_Mostly_uncharacterized,_incl._Acyl-CoA_N-acyltransferase,_and_Citrate_synthase_superfamily


id: CL:4348
description: Mostly uncharacterized, incl. Acyl-CoA N-acyltransferase, and Citrate synthase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4348_Mostly_uncharacterized,_incl._Acyl-CoA_N-acyltransferase,_and_Citrate_synthase_superfamily


id: CL:4349
description: Mostly uncharacterized, incl. Thioredoxin-like fold, and Caspase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4349_Mostly_uncharacterized,_incl._Thioredoxin-like_fold,_and_Caspase_domain


id: CL:4351
description: Mixed, incl. Thioredoxin-like fold, and Caspase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4351_Mixed,_incl._Thioredoxin-like_fold,_and_Caspase_domain


id: CL:4370
description: Mixed, incl. Citrate synthase superfamily, and Cardiolipin metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4370_Mixed,_incl._Citrate_synthase_superfamily,_and_Cardiolipin_metabolic_process


id: CL:4382
description: Mostly uncharacterized, incl. FAS1 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4382_Mostly_uncharacterized,_incl._FAS1_domain


id: CL:4399
description: Mixed, incl. Lipid metabolic process, and Transmembrane helix
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4399_Mixed,_incl._Lipid_metabolic_process,_and_Transmembrane_helix


id: CL:4400
description: Mixed, incl. Lipid metabolic process, and Phototransduction
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4400_Mixed,_incl._Lipid_metabolic_process,_and_Phototransduction


id: CL:4401
description: Mixed, incl. Isoprenoid metabolic process, and Phototransduction
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4401_Mixed,_incl._Isoprenoid_metabolic_process,_and_Phototransduction


id: CL:4402
description: Mixed, incl. Isoprenoid metabolic process, and Phototransduction
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4402_Mixed,_incl._Isoprenoid_metabolic_process,_and_Phototransduction


id: CL:4403
description: Mixed, incl. Phototransduction, and DoxX family
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4403_Mixed,_incl._Phototransduction,_and_DoxX_family


id: CL:4405
description: Mixed, incl. Phototransduction, and DoxX family
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4405_Mixed,_incl._Phototransduction,_and_DoxX_family


id: CL:4407
description: Mixed, incl. Phototransduction, and DoxX family
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4407_Mixed,_incl._Phototransduction,_and_DoxX_family


id: CL:4438
description: Mixed, incl. Isoprenoid metabolic process, and Fatty acid hydroxylase
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4438_Mixed,_incl._Isoprenoid_metabolic_process,_and_Fatty_acid_hydroxylase


id: CL:4439
description: Carotenoid biosynthesis, and Polyprenyl synthetase
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4439_Carotenoid_biosynthesis,_and_Polyprenyl_synthetase


id: CL:4453
description: Polyprenyl synthetase, and Prenyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4453_Polyprenyl_synthetase,_and_Prenyltransferase_activity


id: CL:4464
description: Mixed, incl. Fatty acid hydroxylase, and Oxoglutarate/iron-dependent dioxygenase
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4464_Mixed,_incl._Fatty_acid_hydroxylase,_and_Oxoglutarate/iron-dependent_dioxygenase


id: CL:4473
description: Mixed, incl. Domain of unknown function DUF1206, and Phosphatidate phosphatase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4473_Mixed,_incl._Domain_of_unknown_function_DUF1206,_and_Phosphatidate_phosphatase_activity


id: CL:4474
description: Mixed, incl. Domain of unknown function DUF1206, and Phosphatidate phosphatase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4474_Mixed,_incl._Domain_of_unknown_function_DUF1206,_and_Phosphatidate_phosphatase_activity


id: CL:4476
description: Mixed, incl. Domain of unknown function DUF1206, and NAD+ kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4476_Mixed,_incl._Domain_of_unknown_function_DUF1206,_and_NAD+_kinase_activity


id: CL:4490
description: Mixed, incl. Inorganic diphosphatase activity, and Phosphatidate phosphatase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4490_Mixed,_incl._Inorganic_diphosphatase_activity,_and_Phosphatidate_phosphatase_activity


id: CL:4499
description: Mixed, incl. Carbohydrate-binding-like fold, and Ribosomal protein S13-like, H2TH
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4499_Mixed,_incl._Carbohydrate-binding-like_fold,_and_Ribosomal_protein_S13-like,_H2TH


id: CL:4508
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4508_Mixed,_incl._Glycerophospholipid_metabolism,_and_Phosphatidic_acid_phosphatase_type_2/haloperoxidase

description:
  Mixed, incl. Glycerophospholipid metabolism, and Phosphatidic acid phosphatase type 2/haloperoxidase


id: CL:4509
description: Glycerophospholipid metabolism, and Phosphatidic acid phosphatase type 2/haloperoxidase
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4509_Glycerophospholipid_metabolism,_and_Phosphatidic_acid_phosphatase_type_2/haloperoxidase


id: CL:4511
description: Glycerophospholipid metabolism, and Acid phosphatase homologues
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4511_Glycerophospholipid_metabolism,_and_Acid_phosphatase_homologues


id: CL:4512
description: Mixed, incl. Acid phosphatase homologues, and Phosphate acyltransferases
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4512_Mixed,_incl._Acid_phosphatase_homologues,_and_Phosphate_acyltransferases


id: CL:452
description: Malate dehydrogenase activity, and Tricarboxylic acid cycle
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:452_Malate_dehydrogenase_activity,_and_Tricarboxylic_acid_cycle


id: CL:4525
description: CDP-alcohol phosphatidyltransferase, and Lipoprotein metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4525_CDP-alcohol_phosphatidyltransferase,_and_Lipoprotein_metabolic_process


id: CL:4539
description: Mixed, incl. Ether lipid metabolism, and Protein homodimerization activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4539_Mixed,_incl._Ether_lipid_metabolism,_and_Protein_homodimerization_activity


id: CL:4548
description: Mixed, incl. Ferric iron binding, and Phospholipase D-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4548_Mixed,_incl._Ferric_iron_binding,_and_Phospholipase_D-like_domain


id: CL:4559
description: Mostly uncharacterized, incl. Nucleotide-diphospho-sugar transferases, and Response to chemical
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4559_Mostly_uncharacterized,_incl._Nucleotide-diphospho-sugar_transferases,_and_Response_to_chemical


id: CL:4560
description: Mostly uncharacterized, incl. FAD-NAD(P)-binding, and Antibiotic catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4560_Mostly_uncharacterized,_incl._FAD-NAD(P)-binding,_and_Antibiotic_catabolic_process


id: CL:4561
description: Mostly uncharacterized, incl. FAD-NAD(P)-binding, and Antibiotic catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4561_Mostly_uncharacterized,_incl._FAD-NAD(P)-binding,_and_Antibiotic_catabolic_process


id: CL:4562
description: Mostly uncharacterized, incl. FAD-NAD(P)-binding, and Antibiotic catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4562_Mostly_uncharacterized,_incl._FAD-NAD(P)-binding,_and_Antibiotic_catabolic_process


id: CL:4564
description: Mixed, incl. Antibiotic catabolic process, and FAD-NAD(P)-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4564_Mixed,_incl._Antibiotic_catabolic_process,_and_FAD-NAD(P)-binding


id: CL:4566
description: Mixed, incl. Phosphoesterase MJ0912, and Sodium/solute symporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4566_Mixed,_incl._Phosphoesterase_MJ0912,_and_Sodium/solute_symporter


id: CL:4582
description: Antibiotic catabolic process, and Organic anion transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4582_Antibiotic_catabolic_process,_and_Organic_anion_transmembrane_transporter_activity


id: CL:4603
description: Mixed, incl. Arsenate reductase-like, and Ig-like domain CHU_C associated
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4603_Mixed,_incl._Arsenate_reductase-like,_and_Ig-like_domain_CHU_C_associated


id: CL:4613
description: Mixed, incl. HupE / UreJ protein, and Arginine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4613_Mixed,_incl._HupE_/_UreJ_protein,_and_Arginine_biosynthesis


id: CL:4629
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4629_Mostly_uncharacterized,_incl._Domain_of_unknown_function_DUF547,_and_Transferase_1,_rSAM/selenodomain-associated

description:
  Mostly uncharacterized, incl. Domain of unknown function DUF547, and Transferase 1, rSAM/selenodomain-associated


id: CL:4630
description: Mixed, incl. Domain of unknown function DUF547, and Transferase 1, rSAM/selenodomain-associated
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4630_Mixed,_incl._Domain_of_unknown_function_DUF547,_and_Transferase_1,_rSAM/selenodomain-associated


id: CL:4632
description: Mixed, incl. Domain of unknown function DUF547, and Transferase 1, rSAM/selenodomain-associated
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4632_Mixed,_incl._Domain_of_unknown_function_DUF547,_and_Transferase_1,_rSAM/selenodomain-associated


id: CL:4634
description: Mixed, incl. 4Fe-4S binding domain, and Protein of unknown function DUF6503
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4634_Mixed,_incl._4Fe-4S_binding_domain,_and_Protein_of_unknown_function_DUF6503


id: CL:4646
description: Mixed, incl. Transferase 1, rSAM/selenodomain-associated, and Domain of unknown function DUF547
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4646_Mixed,_incl._Transferase_1,_rSAM/selenodomain-associated,_and_Domain_of_unknown_function_DUF547


id: CL:4669
description: Mixed, incl. Alkylhydroperoxidase AhpD core, and Serine aminopeptidase, S33
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4669_Mixed,_incl._Alkylhydroperoxidase_AhpD_core,_and_Serine_aminopeptidase,_S33


id: CL:4680
description: Mixed, incl. beta-Lactam resistance, and FtsX-like permease family
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4680_Mixed,_incl._beta-Lactam_resistance,_and_FtsX-like_permease_family


id: CL:4681
description: Mixed, incl. beta-Lactam resistance, and FtsX-like permease family
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4681_Mixed,_incl._beta-Lactam_resistance,_and_FtsX-like_permease_family


id: CL:4682
description: beta-Lactam resistance, and FtsX-like permease family
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4682_beta-Lactam_resistance,_and_FtsX-like_permease_family


id: CL:4683
description: Mixed, incl. FtsX-like permease family, and Biotin-lipoyl like
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4683_Mixed,_incl._FtsX-like_permease_family,_and_Biotin-lipoyl_like


id: CL:4684
description: FtsX-like permease family, and MacB, ATP-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4684_FtsX-like_permease_family,_and_MacB,_ATP-binding_domain


id: CL:4686
description: Biotin-lipoyl like, and MacB-like periplasmic core domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4686_Biotin-lipoyl_like,_and_MacB-like_periplasmic_core_domain


id: CL:4700
description: FtsX-like permease family, and MacB, ATP-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4700_FtsX-like_permease_family,_and_MacB,_ATP-binding_domain


id: CL:4709
description: Mixed, incl. Biotin-lipoyl like, and Acriflavin resistance protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4709_Mixed,_incl._Biotin-lipoyl_like,_and_Acriflavin_resistance_protein


id: CL:4710
description: Mixed, incl. Palmitate, and Hydrophobe/amphiphile efflux-1 HAE1
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4710_Mixed,_incl._Palmitate,_and_Hydrophobe/amphiphile_efflux-1_HAE1


id: CL:4723
description: Mixed, incl. AcrB/AcrD/AcrF family, and DNA-binding HTH domain, TetR-type
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4723_Mixed,_incl._AcrB/AcrD/AcrF_family,_and_DNA-binding_HTH_domain,_TetR-type


id: CL:4732
description: Mixed, incl. ABC-transporter extension domain, and MMPL family
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4732_Mixed,_incl._ABC-transporter_extension_domain,_and_MMPL_family


id: CL:4743
description: Mixed, incl. Heavy-metal-associated domain, and Predicted permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4743_Mixed,_incl._Heavy-metal-associated_domain,_and_Predicted_permease


id: CL:4744
description: Mixed, incl. Protein of unknown function DUF3347, and AcrB/AcrD/AcrF family
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4744_Mixed,_incl._Protein_of_unknown_function_DUF3347,_and_AcrB/AcrD/AcrF_family


id: CL:4746
description: Mixed, incl. Protein of unknown function DUF3347, and Cupredoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4746_Mixed,_incl._Protein_of_unknown_function_DUF3347,_and_Cupredoxin


id: CL:4747
description: Mixed, incl. Cupredoxin, and Predicted permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4747_Mixed,_incl._Cupredoxin,_and_Predicted_permease


id: CL:4756
description: Mixed, incl. Caprolactam degradation, and Heavy metal binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4756_Mixed,_incl._Caprolactam_degradation,_and_Heavy_metal_binding_domain


id: CL:4767
description: Mixed, incl. E1-E2 ATPase, and Cation efflux family
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4767_Mixed,_incl._E1-E2_ATPase,_and_Cation_efflux_family


id: CL:477
description: Glutamate biosynthetic process, and Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:477_Glutamate_biosynthetic_process,_and_Glu/Leu/Phe/Val_dehydrogenase,_dimerisation_domain


id: CL:4777
description: Mixed, incl. Heavy-metal-associated domain, and Predicted permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4777_Mixed,_incl._Heavy-metal-associated_domain,_and_Predicted_permease


id: CL:4791
description: Mixed, incl. Protein of unknown function DUF4331, and Protein of unknown function DUF6503
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4791_Mixed,_incl._Protein_of_unknown_function_DUF4331,_and_Protein_of_unknown_function_DUF6503


id: CL:4794
description: Outer membrane efflux protein, and Peptidase M24
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4794_Outer_membrane_efflux_protein,_and_Peptidase_M24


id: CL:4807
description: Mixed, incl. Protein of unknown function DUF4331, and EamA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4807_Mixed,_incl._Protein_of_unknown_function_DUF4331,_and_EamA_domain


id: CL:4825
description: Mixed, incl. TAT protein transport complex, and N-acetyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4825_Mixed,_incl._TAT_protein_transport_complex,_and_N-acetyltransferase_activity


id: CL:4827
description: Mixed, incl. TAT protein transport complex, and Rhomboid family
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4827_Mixed,_incl._TAT_protein_transport_complex,_and_Rhomboid_family


id: CL:4828
description: Mixed, incl. TAT protein transport complex, and Rhomboid family
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4828_Mixed,_incl._TAT_protein_transport_complex,_and_Rhomboid_family


id: CL:4829
description: TAT protein transport complex, and Rhomboid family
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4829_TAT_protein_transport_complex,_and_Rhomboid_family


id: CL:4842
description: Mixed, incl. Alkylhydroperoxidase AhpD core, and Protein of unknown function DUF3140
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4842_Mixed,_incl._Alkylhydroperoxidase_AhpD_core,_and_Protein_of_unknown_function_DUF3140


id: CL:4853
description: Mixed, incl. N-acetyltransferase activity, and Peptidase S51
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4853_Mixed,_incl._N-acetyltransferase_activity,_and_Peptidase_S51


id: CL:4856
description: Mixed, incl. Peptidase S51, and D-alanyl-D-alanine carboxypeptidase
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4856_Mixed,_incl._Peptidase_S51,_and_D-alanyl-D-alanine_carboxypeptidase


id: CL:4875
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4875_Mixed,_incl._Sodium_ion_transmembrane_transport,_and_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen,_NAD(P)H_as_one_donor,_and_incorporation_of_one_atom_of_oxygen

description:
  Mixed, incl. Sodium ion transmembrane transport, and Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen


id: CL:4884
description: Ubiquinone, and Fe-S cluster assembly domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4884_Ubiquinone,_and_Fe-S_cluster_assembly_domain_superfamily


id: CL:490
description: Valine, leucine and isoleucine degradation, and 3-hydroxyacyl-CoA dehydrogenase, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:490_Valine,_leucine_and_isoleucine_degradation,_and_3-hydroxyacyl-CoA_dehydrogenase,_C-terminal


id: CL:4909
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4909_Mostly_uncharacterized,_incl._Cryptochrome/DNA_photolyase,_FAD-binding_domain-like_superfamily,_and_Domain_of_unknown_function_DUF2383

description:
  Mostly uncharacterized, incl. Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily, and Domain of unknown function DUF2383


id: CL:4910
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4910_Mostly_uncharacterized,_incl._Domain_of_unknown_function_DUF2383,_and_Integral_component_of_plasma_membrane

description:
  Mostly uncharacterized, incl. Domain of unknown function DUF2383, and Integral component of plasma membrane


id: CL:4911
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4911_Mostly_uncharacterized,_incl._Domain_of_unknown_function_DUF2383,_and_Integral_component_of_plasma_membrane

description:
  Mostly uncharacterized, incl. Domain of unknown function DUF2383, and Integral component of plasma membrane


id: CL:4912
description: Mixed, incl. Domain of unknown function DUF2383, and Integral component of plasma membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4912_Mixed,_incl._Domain_of_unknown_function_DUF2383,_and_Integral_component_of_plasma_membrane


id: CL:4913
description: Mixed, incl. Domain of unknown function DUF2383, and BLUF domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4913_Mixed,_incl._Domain_of_unknown_function_DUF2383,_and_BLUF_domain


id: CL:4916
description: Mixed, incl. Domain of unknown function DUF2383, and Translocation and assembly module TamB
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4916_Mixed,_incl._Domain_of_unknown_function_DUF2383,_and_Translocation_and_assembly_module_TamB


id: CL:4919
description: Mixed, incl. Translocation and assembly module TamB, and GH3 family
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4919_Mixed,_incl._Translocation_and_assembly_module_TamB,_and_GH3_family


id: CL:492
description: Mixed, incl. Lipid oxidation, and acyl-CoA dehydrogenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:492_Mixed,_incl._Lipid_oxidation,_and_acyl-CoA_dehydrogenase_activity


id: CL:494
description: Lipid oxidation, and acyl-CoA dehydrogenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:494_Lipid_oxidation,_and_acyl-CoA_dehydrogenase_activity


id: CL:4949
description: Mixed, incl. Transglutaminase-like, and GDP metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4949_Mixed,_incl._Transglutaminase-like,_and_GDP_metabolic_process


id: CL:4964
description: Mixed, incl. Cell adhesion, and AI-2E family transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4964_Mixed,_incl._Cell_adhesion,_and_AI-2E_family_transporter


id: CL:497
description: Mixed, incl. 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain, and Thiolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:497_Mixed,_incl._3-hydroxyacyl-CoA_dehydrogenase,_NAD_binding_domain,_and_Thiolase


id: CL:4979
description: Mixed, incl. Ureohydrolase, and Arginine catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4979_Mixed,_incl._Ureohydrolase,_and_Arginine_catabolic_process


id: CL:4993
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4993_Mixed,_incl._Cryptochrome/DNA_photolyase,_FAD-binding_domain-like_superfamily,_and_Polyol_metabolic_process

description:
  Mixed, incl. Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily, and Polyol metabolic process


id: CL:4994
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4994_Mixed,_incl._Cryptochrome/DNA_photolyase,_FAD-binding_domain-like_superfamily,_and_Flavin_reductase_like_domain

description:
  Mixed, incl. Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily, and Flavin reductase like domain


id: CL:4996
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4996_Mixed,_incl._Cryptochrome/DNA_photolyase,_FAD-binding_domain-like_superfamily,_and_Flavin_reductase_like_domain

description:
  Mixed, incl. Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily, and Flavin reductase like domain


id: CL:4998
description: Mixed, incl. Cryptochrome DASH, and Flavin reductase like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:4998_Mixed,_incl._Cryptochrome_DASH,_and_Flavin_reductase_like_domain


id: CL:5029
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:5029_Mixed,_incl._Polyol_metabolic_process,_and_Cryptochrome/DNA_photolyase_class_1,_conserved_site,_C-terminal

description:
  Mixed, incl. Polyol metabolic process, and Cryptochrome/DNA photolyase class 1, conserved site, C-terminal


id: CL:5031
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:5031_Mixed,_incl._Cryptochrome/DNA_photolyase_class_1,_conserved_site,_C-terminal,_and_Enoyl-(Acyl_carrier_protein)_reductase

description:
  Mixed, incl. Cryptochrome/DNA photolyase class 1, conserved site, C-terminal, and Enoyl-(Acyl carrier protein) reductase


id: CL:5048
description: Mostly uncharacterized, incl. Six-bladed beta-propeller, TolB-like, and Nitrotoluene degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:5048_Mostly_uncharacterized,_incl._Six-bladed_beta-propeller,_TolB-like,_and_Nitrotoluene_degradation


id: CL:5049
description: Mostly uncharacterized, incl. Six-bladed beta-propeller, TolB-like, and Nitrotoluene degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:5049_Mostly_uncharacterized,_incl._Six-bladed_beta-propeller,_TolB-like,_and_Nitrotoluene_degradation


id: CL:5050
description: Mostly uncharacterized, incl. Peroxidase, and DJ-1/PfpI
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:5050_Mostly_uncharacterized,_incl._Peroxidase,_and_DJ-1/PfpI


id: CL:5051
description: Mixed, incl. Peroxidase, and DJ-1/PfpI
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:5051_Mixed,_incl._Peroxidase,_and_DJ-1/PfpI


id: CL:5052
description: Mixed, incl. Peroxidase, and DJ-1/PfpI
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:5052_Mixed,_incl._Peroxidase,_and_DJ-1/PfpI


id: CL:5054
description: Mixed, incl. DJ-1/PfpI, and Peroxidase
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:5054_Mixed,_incl._DJ-1/PfpI,_and_Peroxidase


id: CL:5073
description: Mixed, incl. Redoxin, and DJ-1/PfpI
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:5073_Mixed,_incl._Redoxin,_and_DJ-1/PfpI


id: CL:5083
description: Mixed, incl. Cupin domain, and Toxin-antitoxin complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:5083_Mixed,_incl._Cupin_domain,_and_Toxin-antitoxin_complex


id: CL:5101
description: Mixed, incl. Nitrotoluene degradation, and MtfA family
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:5101_Mixed,_incl._Nitrotoluene_degradation,_and_MtfA_family


id: CL:5103
description: Mixed, incl. Nitrotoluene degradation, and MtfA family
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:5103_Mixed,_incl._Nitrotoluene_degradation,_and_MtfA_family


id: CL:5105
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:5105_Mixed,_incl._Large_cysteine-rich_periplasmic_protein_OmcB-like,_DUF11_domain,_and_Quercetin_2,3-dioxygenase_activity

description:
  Mixed, incl. Large cysteine-rich periplasmic protein OmcB-like, DUF11 domain, and Quercetin 2,3-dioxygenase activity


id: CL:5121
description: Nitrotoluene degradation, and MarR-type HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:5121_Nitrotoluene_degradation,_and_MarR-type_HTH_domain


id: CL:5140
description: Mostly uncharacterized, incl. Chloride transport, and Protein import
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:5140_Mostly_uncharacterized,_incl._Chloride_transport,_and_Protein_import


id: CL:5142
description: Mixed, incl. Chloride transport, and Protein import
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:5142_Mixed,_incl._Chloride_transport,_and_Protein_import


id: CL:5158
description: Mixed, incl. Protein of unknown function DUF6364, and Peptidase family M28
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:5158_Mixed,_incl._Protein_of_unknown_function_DUF6364,_and_Peptidase_family_M28


id: CL:5169
description: Mostly uncharacterized, incl. Citrate transporter, and DbpA RNA binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:5169_Mostly_uncharacterized,_incl._Citrate_transporter,_and_DbpA_RNA_binding_domain


id: CL:5171
description: Mixed, incl. Haloacid dehalogenase-like hydrolase, and FAD binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:5171_Mixed,_incl._Haloacid_dehalogenase-like_hydrolase,_and_FAD_binding_domain


id: CL:5173
description: Mixed, incl. Haloacid dehalogenase-like hydrolase, and Galactose mutarotase-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:5173_Mixed,_incl._Haloacid_dehalogenase-like_hydrolase,_and_Galactose_mutarotase-like_domain_superfamily


id: CL:5195
description: Mixed, incl. Citrate transporter, and Thiamine diphosphate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:5195_Mixed,_incl._Citrate_transporter,_and_Thiamine_diphosphate_metabolic_process


id: CL:5206
description: Mostly uncharacterized, incl. Beta-lactamase, and Zinc ion binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:5206_Mostly_uncharacterized,_incl._Beta-lactamase,_and_Zinc_ion_binding


id: CL:5207
description: Mostly uncharacterized, incl. Beta-lactamase, and Glutamate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:5207_Mostly_uncharacterized,_incl._Beta-lactamase,_and_Glutamate_metabolic_process


id: CL:5208
description: Mostly uncharacterized, incl. Formate metabolic process, and EcxA, zinc-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:5208_Mostly_uncharacterized,_incl._Formate_metabolic_process,_and_EcxA,_zinc-binding


id: CL:5209
description: Mixed, incl. Formate metabolic process, and EcxA, zinc-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:5209_Mixed,_incl._Formate_metabolic_process,_and_EcxA,_zinc-binding


id: CL:5210
description: Mixed, incl. Formate metabolic process, and EcxA, zinc-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:5210_Mixed,_incl._Formate_metabolic_process,_and_EcxA,_zinc-binding


id: CL:5214
description: Formate metabolic process, and EcxA, zinc-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:5214_Formate_metabolic_process,_and_EcxA,_zinc-binding


id: CL:5241
description: Mixed, incl. Met-zincin, and Tissue inhibitor of metalloproteinases-like, OB-fold
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:5241_Mixed,_incl._Met-zincin,_and_Tissue_inhibitor_of_metalloproteinases-like,_OB-fold


id: CL:5252
description: Mixed, incl. Glutathione biosynthesis, and Regulation of nitric oxide metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:5252_Mixed,_incl._Glutathione_biosynthesis,_and_Regulation_of_nitric_oxide_metabolic_process


id: CL:5255
description: Mixed, incl. Glutathione biosynthesis, and Regulation of nitric oxide metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:5255_Mixed,_incl._Glutathione_biosynthesis,_and_Regulation_of_nitric_oxide_metabolic_process


id: CL:5271
description: Mixed, incl. Cell aggregation, and Autotransporter beta-domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:5271_Mixed,_incl._Cell_aggregation,_and_Autotransporter_beta-domain_superfamily


id: CL:5281
description: Mixed, incl. Beta-lactamase, and Bacterial PH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:5281_Mixed,_incl._Beta-lactamase,_and_Bacterial_PH_domain


id: CL:5282
description: Mixed, incl. Beta-lactamase, and Bacterial PH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:5282_Mixed,_incl._Beta-lactamase,_and_Bacterial_PH_domain


id: CL:5284
description: Mixed, incl. Beta-lactamase, and Phosphate ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:5284_Mixed,_incl._Beta-lactamase,_and_Phosphate_ion_transport


id: CL:5306
description: Mixed, incl. Heme binding, and Alpha/Beta hydrolase fold
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:5306_Mixed,_incl._Heme_binding,_and_Alpha/Beta_hydrolase_fold


id: CL:532
description: Methylmalonyl-CoA mutase, and Vicinal oxygen chelate (VOC) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:532_Methylmalonyl-CoA_mutase,_and_Vicinal_oxygen_chelate_(VOC)_domain


id: CL:5322
description: Mostly uncharacterized, incl. Cyclophilin-like domain superfamily, and DNA integration
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:5322_Mostly_uncharacterized,_incl._Cyclophilin-like_domain_superfamily,_and_DNA_integration


id: CL:5323
description: Mixed, incl. DNA integration, and Peroxidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:5323_Mixed,_incl._DNA_integration,_and_Peroxidase_activity


id: CL:5325
description: Mostly uncharacterized, incl. Phosphofructokinase activity, and Arm, DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:5325_Mostly_uncharacterized,_incl._Phosphofructokinase_activity,_and_Arm,_DNA-binding_domain


id: CL:5327
description: Mixed, incl. Phosphofructokinase activity, and Arm, DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:5327_Mixed,_incl._Phosphofructokinase_activity,_and_Arm,_DNA-binding_domain


id: CL:5337
description: Mixed, incl. Papain-like cysteine peptidase superfamily, and Peroxidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:5337_Mixed,_incl._Papain-like_cysteine_peptidase_superfamily,_and_Peroxidase_activity


id: CL:5356
description: Cyclophilin-like domain superfamily, and Glycoside hydrolase/deacetylase, beta/alpha-barrel
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:5356_Cyclophilin-like_domain_superfamily,_and_Glycoside_hydrolase/deacetylase,_beta/alpha-barrel


id: CL:5369
description: Mixed, incl. SnoaL-like domain, and Single-stranded DNA binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:5369_Mixed,_incl._SnoaL-like_domain,_and_Single-stranded_DNA_binding


id: CL:5371
description: Mixed, incl. SnoaL-like domain, and MFS transporter superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:5371_Mixed,_incl._SnoaL-like_domain,_and_MFS_transporter_superfamily


id: CL:5374
description: Mixed, incl. Dienelactone hydrolase family, and SnoaL-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:5374_Mixed,_incl._Dienelactone_hydrolase_family,_and_SnoaL-like_domain


id: CL:5389
description: Mixed, incl. SnoaL-like domain 5, and Ferritin-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:5389_Mixed,_incl._SnoaL-like_domain_5,_and_Ferritin-like


id: CL:5415
description: Mixed, incl. Alanine racemase, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:5415_Mixed,_incl._Alanine_racemase,_N-terminal


id: CL:5425
description: Mixed, incl. Potassium ion transport, and Mechanosensitive ion channel MscS, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:5425_Mixed,_incl._Potassium_ion_transport,_and_Mechanosensitive_ion_channel_MscS,_C-terminal


id: CL:5427
description: Mixed, incl. Potassium ion transport, and Mechanosensitive ion channel MscS, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:5427_Mixed,_incl._Potassium_ion_transport,_and_Mechanosensitive_ion_channel_MscS,_C-terminal


id: CL:5428
description: Mixed, incl. Potassium ion transport, and Conserved TM helix
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:5428_Mixed,_incl._Potassium_ion_transport,_and_Conserved_TM_helix


id: CL:5444
description: Mixed, incl. Subtilase family, and Methylglyoxal metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:5444_Mixed,_incl._Subtilase_family,_and_Methylglyoxal_metabolic_process


id: CL:545
description: Mixed, incl. Aldehyde dehydrogenase, glutamic acid active site, and Caprolactam degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:545_Mixed,_incl._Aldehyde_dehydrogenase,_glutamic_acid_active_site,_and_Caprolactam_degradation


id: CL:5455
description: Protein of unknown function DUF3124, and Regulation of secretion
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:5455_Protein_of_unknown_function_DUF3124,_and_Regulation_of_secretion


id: CL:5477
description: Mixed, incl. UDP-N-acetylglucosamine metabolic process, and Sigma-70, region 4
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:5477_Mixed,_incl._UDP-N-acetylglucosamine_metabolic_process,_and_Sigma-70,_region_4


id: CL:5490
description: Mixed, incl. DNA metabolic process, and Endonuclease
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:5490_Mixed,_incl._DNA_metabolic_process,_and_Endonuclease


id: CL:5492
description: Mixed, incl. DNA modification, and DNA metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:5492_Mixed,_incl._DNA_modification,_and_DNA_metabolic_process


id: CL:5493
description: Mixed, incl. DNA modification, and Domain of unknown function DUF262
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:5493_Mixed,_incl._DNA_modification,_and_Domain_of_unknown_function_DUF262


id: CL:5494
description: Mixed, incl. DNA modification, and Domain of unknown function DUF262
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:5494_Mixed,_incl._DNA_modification,_and_Domain_of_unknown_function_DUF262


id: CL:5495
description: Mixed, incl. DNA modification, and Helix-turn-helix domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:5495_Mixed,_incl._DNA_modification,_and_Helix-turn-helix_domain


id: CL:5497
description: DNA restriction-modification system, and HsdM N-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:5497_DNA_restriction-modification_system,_and_HsdM_N-terminal_domain


id: CL:5509
description: Mixed, incl. Helix-turn-helix domain, and Arm, DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:5509_Mixed,_incl._Helix-turn-helix_domain,_and_Arm,_DNA-binding_domain


id: CL:5520
description: Mixed, incl. Domain of unknown function DUF262, and DNA restriction-modification system
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:5520_Mixed,_incl._Domain_of_unknown_function_DUF262,_and_DNA_restriction-modification_system


id: CL:5523
description: Domain of unknown function DUF262, and DNA restriction-modification system
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:5523_Domain_of_unknown_function_DUF262,_and_DNA_restriction-modification_system


id: CL:5541
description: Mostly uncharacterized, incl. HNH nuclease, and RNA-directed DNA polymerase
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:5541_Mostly_uncharacterized,_incl._HNH_nuclease,_and_RNA-directed_DNA_polymerase


id: CL:5542
description: Mixed, incl. DNA replication, synthesis of RNA primer, and Helix-turn-helix domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:5542_Mixed,_incl._DNA_replication,_synthesis_of_RNA_primer,_and_Helix-turn-helix_domain


id: CL:5544
description: Mixed, incl. Arc-type ribbon-helix-helix, and Endonuclease relaxase, MobA/VirD2
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:5544_Mixed,_incl._Arc-type_ribbon-helix-helix,_and_Endonuclease_relaxase,_MobA/VirD2


id: CL:5556
description: DNA replication, synthesis of RNA primer, and Helix-turn-helix domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:5556_DNA_replication,_synthesis_of_RNA_primer,_and_Helix-turn-helix_domain


id: CL:5566
description: Mixed, incl. HNH nuclease, and RNA-directed DNA polymerase
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:5566_Mixed,_incl._HNH_nuclease,_and_RNA-directed_DNA_polymerase


id: CL:5584
description: Mixed, incl. DNA geometric change, and MmeI-like, helicase spacer domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:5584_Mixed,_incl._DNA_geometric_change,_and_MmeI-like,_helicase_spacer_domain


id: CL:5585
description: Mixed, incl. MmeI-like, helicase spacer domain, and Endonuclease relaxase, MobA/VirD2
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:5585_Mixed,_incl._MmeI-like,_helicase_spacer_domain,_and_Endonuclease_relaxase,_MobA/VirD2


id: CL:5588
description: Mixed, incl. MmeI-like, helicase spacer domain, and tRNA endonuclease-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:5588_Mixed,_incl._MmeI-like,_helicase_spacer_domain,_and_tRNA_endonuclease-like_domain_superfamily


id: CL:5604
description: Mixed, incl. Phage integrase SAM-like domain, and Putative DNA-binding domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:5604_Mixed,_incl._Phage_integrase_SAM-like_domain,_and_Putative_DNA-binding_domain_superfamily


id: CL:5620
description: Mostly uncharacterized, incl. 23S rRNA-intervening sequence protein, and Endonuclease
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:5620_Mostly_uncharacterized,_incl._23S_rRNA-intervening_sequence_protein,_and_Endonuclease


id: CL:5621
description: Mixed, incl. 23S rRNA-intervening sequence protein, and PIN domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:5621_Mixed,_incl._23S_rRNA-intervening_sequence_protein,_and_PIN_domain


id: CL:5622
description: Mixed, incl. 23S rRNA-intervening sequence protein, and PLD-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:5622_Mixed,_incl._23S_rRNA-intervening_sequence_protein,_and_PLD-like_domain


id: CL:5624
description: 23S rRNA-intervening sequence protein, and Transposase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:5624_23S_rRNA-intervening_sequence_protein,_and_Transposase_activity


id: CL:5641
description: Mixed, incl. PLD-like domain, and DNA geometric change
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:5641_Mixed,_incl._PLD-like_domain,_and_DNA_geometric_change


id: CL:5654
description: Mixed, incl. PIN domain, and Arc-type ribbon-helix-helix
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:5654_Mixed,_incl._PIN_domain,_and_Arc-type_ribbon-helix-helix


id: CL:567
description: Phenylalanine metabolism, and PepSY-associated TM region
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:567_Phenylalanine_metabolism,_and_PepSY-associated_TM_region


id: CL:5670
description: Mixed, incl. GIY-YIG endonuclease superfamily, and Methyltransferase small domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:5670_Mixed,_incl._GIY-YIG_endonuclease_superfamily,_and_Methyltransferase_small_domain


id: CL:5671
description: Mixed, incl. GIY-YIG endonuclease superfamily, and Methyltransferase small domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:5671_Mixed,_incl._GIY-YIG_endonuclease_superfamily,_and_Methyltransferase_small_domain


id: CL:5684
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:5684_Mixed,_incl._Protein-L-isoaspartate(D-aspartate)_O-methyltransferase_(PCMT),_and_GIY-YIG_catalytic_domain

description:
  Mixed, incl. Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT), and GIY-YIG catalytic domain


id: CL:5695
description: Mixed, incl. LysR, substrate-binding, and Na+/H+ antiporter family
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:5695_Mixed,_incl._LysR,_substrate-binding,_and_Na+/H+_antiporter_family


id: CL:5696
description: Mixed, incl. FAD binding, and Major facilitator superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:5696_Mixed,_incl._FAD_binding,_and_Major_facilitator_superfamily


id: CL:5705
description: Mixed, incl. LysR, substrate-binding, and Na+/H+ antiporter family
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:5705_Mixed,_incl._LysR,_substrate-binding,_and_Na+/H+_antiporter_family


id: CL:571
description: Xenobiotic catabolic process, and MIP18 family-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:571_Xenobiotic_catabolic_process,_and_MIP18_family-like


id: CL:5717
description: Mixed, incl. Defense response to virus, and Helicase/UvrB, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:5717_Mixed,_incl._Defense_response_to_virus,_and_Helicase/UvrB,_N-terminal


id: CL:5729
description: Response to toxic substance, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:5729_Response_to_toxic_substance,_and_Signal


id: CL:5738
description: Cardiolipin synthase N-terminal, and Pirin
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:5738_Cardiolipin_synthase_N-terminal,_and_Pirin


id: CL:5789
description: Mixed, incl. GIY-YIG type nucleases (URI domain)
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:5789_Mixed,_incl._GIY-YIG_type_nucleases_(URI_domain)


id: CL:586
description: Oxidoreductase FAD/NAD(P)-binding, and Pyridine nucleotide-disulphide oxidoreductase
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:586_Oxidoreductase_FAD/NAD(P)-binding,_and_Pyridine_nucleotide-disulphide_oxidoreductase


id: CL:59
description: Cellular amino acid metabolic process, and Nucleoside monophosphate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:59_Cellular_amino_acid_metabolic_process,_and_Nucleoside_monophosphate_metabolic_process


id: CL:596
description: Fatty acid biosynthesis, and 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:596_Fatty_acid_biosynthesis,_and_2-dehydro-3-deoxy-D-gluconate_5-dehydrogenase_activity


id: CL:597
description: Fatty acid biosynthetic process, and Biotin
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:597_Fatty_acid_biosynthetic_process,_and_Biotin


id: CL:598
description: Fatty acid biosynthesis, and Fatty acid synthase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:598_Fatty_acid_biosynthesis,_and_Fatty_acid_synthase_activity


id: CL:60
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:60_Mixed,_incl._Nucleoside_monophosphate_metabolic_process,_and_Pteridine-containing_compound_metabolic_process

description:
  Mixed, incl. Nucleoside monophosphate metabolic process, and Pteridine-containing compound metabolic process


id: CL:600
description: Fatty acid biosynthesis, and Immunoglobulin-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:600_Fatty_acid_biosynthesis,_and_Immunoglobulin-like_domain


id: CL:601
description: Fatty acid biosynthesis, and Immunoglobulin-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:601_Fatty_acid_biosynthesis,_and_Immunoglobulin-like_domain


id: CL:61
description: Nucleoside monophosphate metabolic process, and Pyrimidine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:61_Nucleoside_monophosphate_metabolic_process,_and_Pyrimidine_metabolism


id: CL:614
description: acetyl-CoA carboxylase complex, and 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:614_acetyl-CoA_carboxylase_complex,_and_3-Oxoacyl-[acyl-carrier-protein_(ACP)]_synthase_III


id: CL:62
description: Nucleoside monophosphate metabolic process, and Pyrimidine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:62_Nucleoside_monophosphate_metabolic_process,_and_Pyrimidine_metabolism


id: CL:63
description: Ribonucleoside monophosphate metabolic process, and De novo CTP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:63_Ribonucleoside_monophosphate_metabolic_process,_and_De_novo_CTP_biosynthetic_process


id: CL:633
description: Mixed, incl. FabA-like domain, and Phosphopantetheine
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:633_Mixed,_incl._FabA-like_domain,_and_Phosphopantetheine


id: CL:64
description: Purine nucleoside monophosphate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:64_Purine_nucleoside_monophosphate_metabolic_process


id: CL:648
description: Short-chain dehydrogenase/reductase, conserved site, and Xylene degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:648_Short-chain_dehydrogenase/reductase,_conserved_site,_and_Xylene_degradation


id: CL:661
description: Mixed, incl. Pentose phosphate pathway, and Carbohydrate catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:661_Mixed,_incl._Pentose_phosphate_pathway,_and_Carbohydrate_catabolic_process


id: CL:663
description: Mixed, incl. Pentose phosphate pathway, and Glucose metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:663_Mixed,_incl._Pentose_phosphate_pathway,_and_Glucose_metabolic_process


id: CL:665
description: Pentose phosphate pathway, and Glucose metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:665_Pentose_phosphate_pathway,_and_Glucose_metabolic_process


id: CL:667
description: Glycolysis, and Glyceraldehyde/Erythrose phosphate dehydrogenase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:667_Glycolysis,_and_Glyceraldehyde/Erythrose_phosphate_dehydrogenase_family


id: CL:670
description: Glyceraldehyde 3-phosphate dehydrogenase, active site, and Glycolysis
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:670_Glyceraldehyde_3-phosphate_dehydrogenase,_active_site,_and_Glycolysis


id: CL:711
description: Mixed, incl. Nucleotidyl transferase, and Mannose-6-phosphate isomerase, type I
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:711_Mixed,_incl._Nucleotidyl_transferase,_and_Mannose-6-phosphate_isomerase,_type_I


id: CL:723
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:723_Mixed,_incl._Pentose_and_glucuronate_interconversions,_and_2-dehydro-3-deoxy-D-gluconate_5-dehydrogenase_activity

description:
  Mixed, incl. Pentose and glucuronate interconversions, and 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase activity


id: CL:725
description: Mixed, incl. Carboxylic acid transport, and Protein of unknown function DUF4861
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:725_Mixed,_incl._Carboxylic_acid_transport,_and_Protein_of_unknown_function_DUF4861


id: CL:739
description: Mixed, incl. Glucuronate metabolic process, and Polyol metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:739_Mixed,_incl._Glucuronate_metabolic_process,_and_Polyol_metabolic_process


id: CL:751
description: Mixed, incl. FAD binding domain , and Aldo/keto reductase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:751_Mixed,_incl._FAD_binding_domain_,_and_Aldo/keto_reductase_family


id: CL:771
description: Mixed, incl. Translation, and ATP-dependent activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:771_Mixed,_incl._Translation,_and_ATP-dependent_activity


id: CL:772
description: Translation, and ATP-dependent activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:772_Translation,_and_ATP-dependent_activity


id: CL:773
description: Translation, and Proton-transporting ATP synthase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:773_Translation,_and_Proton-transporting_ATP_synthase_complex


id: CL:774
description: Translation, and Proton-transporting ATP synthase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:774_Translation,_and_Proton-transporting_ATP_synthase_complex


id: CL:775
description: Translation, and Proton-transporting ATP synthase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:775_Translation,_and_Proton-transporting_ATP_synthase_complex


id: CL:778
description: Ribosome, and Regulation of translation
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:778_Ribosome,_and_Regulation_of_translation


id: CL:779
description: Ribosome, and Regulation of translation
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:779_Ribosome,_and_Regulation_of_translation


id: CL:782
description: Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:782_Ribosome,_and_Translation_regulator_activity


id: CL:785
description: Ribosome, and Regulation of translation
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:785_Ribosome,_and_Regulation_of_translation


id: CL:788
description: Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:788_Ribosome,_and_Translation_regulator_activity


id: CL:790
description: Ribosome, and Translational elongation
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:790_Ribosome,_and_Translational_elongation


id: CL:794
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:794_Structural_constituent_of_ribosome


id: CL:797
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:797_Structural_constituent_of_ribosome


id: CL:800
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:800_Structural_constituent_of_ribosome


id: CL:802
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:802_Structural_constituent_of_ribosome


id: CL:803
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:803_Structural_constituent_of_ribosome


id: CL:804
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:804_Structural_constituent_of_ribosome


id: CL:845
description: Ribosomal protein L2, domain 2, and rRNA-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:845_Ribosomal_protein_L2,_domain_2,_and_rRNA-binding


id: CL:856
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:856_Structural_constituent_of_ribosome


id: CL:86
description: GMP biosynthesis, and AMP metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:86_GMP_biosynthesis,_and_AMP_metabolic_process


id: CL:877
description: Translation protein, beta-barrel domain superfamily, and Ribosomal protein L2, domain 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:877_Translation_protein,_beta-barrel_domain_superfamily,_and_Ribosomal_protein_L2,_domain_2


id: CL:913
description: Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site, and Large ribosomal subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:913_Cyclophilin-type_peptidyl-prolyl_cis-trans_isomerase,_conserved_site,_and_Large_ribosomal_subunit


id: CL:945
description: Mixed, incl. Repressor, and TGS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:945_Mixed,_incl._Repressor,_and_TGS_domain


id: CL:962
description: DNA-directed RNA polymerase, and Transcription antitermination
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:962_DNA-directed_RNA_polymerase,_and_Transcription_antitermination


id: CL:97
description: UMP metabolic process, and Uracil phosphoribosyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:97_UMP_metabolic_process,_and_Uracil_phosphoribosyltransferase_activity


id: CL:997
description: Proton-transporting ATP synthase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1336802_STRINGid_CL:997_Proton-transporting_ATP_synthase_complex


id: GO:0000701
description: Purine-specific mismatch base pair DNA N-glycosylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0000701
golevel: 6
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0000701_Purine-specific_mismatch_base_pair_DNA_N-glycosylase_activity


id: GO:0000716
description: Transcription-coupled nucleotide-excision repair, DNA damage recognition
memo: https://amigo.geneontology.org/amigo/term/GO:0000716
golevel: 7
name:
  GOBP.STRING_v12.0_1336802_STRINGid_GO:0000716_Transcription-coupled_nucleotide-excision_repair,_DNA_damage_recognition


id: GO:0001073
description: Transcription antitermination factor activity, DNA binding
memo: https://amigo.geneontology.org/amigo/term/GO:0001073
golevel: 2
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0001073_Transcription_antitermination_factor_activity,_DNA_binding


id: GO:0003864
description: 3-methyl-2-oxobutanoate hydroxymethyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003864
golevel: 5
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0003864_3-methyl-2-oxobutanoate_hydroxymethyltransferase_activity


id: GO:0003906
description: DNA-(apurinic or apyrimidinic site) endonuclease activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003906
golevel: 6
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0003906_DNA-(apurinic_or_apyrimidinic_site)_endonuclease_activity


id: GO:0003908
description: methylated-DNA-[protein]-cysteine S-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003908
golevel: 4
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0003908_methylated-DNA-[protein]-cysteine_S-methyltransferase_activity


id: GO:0003917
description: DNA topoisomerase type I (single strand cut, ATP-independent) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003917
golevel: 5
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0003917_DNA_topoisomerase_type_I_(single_strand_cut,_ATP-independent)_activity


id: GO:0003918
description: DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003918
golevel: 3
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0003918_DNA_topoisomerase_type_II_(double_strand_cut,_ATP-hydrolyzing)_activity


id: GO:0003949
memo: https://amigo.geneontology.org/amigo/term/GO:0003949
golevel: 5
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0003949_1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide_isomerase_activity

description:
  1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity


id: GO:0004015
description: adenosylmethionine-8-amino-7-oxononanoate transaminase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004015
golevel: 5
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0004015_adenosylmethionine-8-amino-7-oxononanoate_transaminase_activity


id: GO:0004018
description: N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004018
golevel: 5
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0004018_N6-(1,2-dicarboxyethyl)AMP_AMP-lyase_(fumarate-forming)_activity


id: GO:0004088
description: Carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004088
golevel: 5
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0004088_Carbamoyl-phosphate_synthase_(glutamine-hydrolyzing)_activity


id: GO:0004149
description: Dihydrolipoyllysine-residue succinyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004149
golevel: 3
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0004149_Dihydrolipoyllysine-residue_succinyltransferase_activity


id: GO:0004317
description: 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004317
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0004317_3-hydroxypalmitoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0004318
description: Enoyl-[acyl-carrier-protein] reductase (NADH) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004318
golevel: 6
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0004318_Enoyl-[acyl-carrier-protein]_reductase_(NADH)_activity


id: GO:0004360
description: glutamine-fructose-6-phosphate transaminase (isomerizing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004360
golevel: 6
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0004360_glutamine-fructose-6-phosphate_transaminase_(isomerizing)_activity


id: GO:0004471
description: Malate dehydrogenase (decarboxylating) (NAD+) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004471
golevel: 5
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0004471_Malate_dehydrogenase_(decarboxylating)_(NAD+)_activity


id: GO:0004486
description: Methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004486
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0004486_Methylenetetrahydrofolate_dehydrogenase_[NAD(P)+]_activity


id: GO:0004488
description: Methylenetetrahydrofolate dehydrogenase (NADP+) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004488
golevel: 5
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0004488_Methylenetetrahydrofolate_dehydrogenase_(NADP+)_activity


id: GO:0004489
description: Methylenetetrahydrofolate reductase (NAD(P)H) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004489
golevel: 5
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0004489_Methylenetetrahydrofolate_reductase_(NAD(P)H)_activity


id: GO:0004514
description: Nicotinate-nucleotide diphosphorylase (carboxylating) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004514
golevel: 5
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0004514_Nicotinate-nucleotide_diphosphorylase_(carboxylating)_activity


id: GO:0004582
description: Dolichyl-phosphate beta-D-mannosyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004582
golevel: 6
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0004582_Dolichyl-phosphate_beta-D-mannosyltransferase_activity


id: GO:0004591
description: Oxoglutarate dehydrogenase (succinyl-transferring) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004591
golevel: 5
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0004591_Oxoglutarate_dehydrogenase_(succinyl-transferring)_activity


id: GO:0004639
description: Phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004639
golevel: 5
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0004639_Phosphoribosylaminoimidazolesuccinocarboxamide_synthase_activity


id: GO:0004641
description: Phosphoribosylformylglycinamidine cyclo-ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004641
golevel: 5
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0004641_Phosphoribosylformylglycinamidine_cyclo-ligase_activity


id: GO:0004643
description: Phosphoribosylaminoimidazolecarboxamide formyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004643
golevel: 5
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0004643_Phosphoribosylaminoimidazolecarboxamide_formyltransferase_activity


id: GO:0004648
description: O-phospho-L-serine:2-oxoglutarate aminotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004648
golevel: 5
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0004648_O-phospho-L-serine:2-oxoglutarate_aminotransferase_activity


id: GO:0004719
description: protein-L-isoaspartate (D-aspartate) O-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004719
golevel: 5
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0004719_protein-L-isoaspartate_(D-aspartate)_O-methyltransferase_activity


id: GO:0004748
description: Ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0004748
golevel: 6
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0004748_Ribonucleoside-diphosphate_reductase_activity,_thioredoxin_disulfide_as_acceptor


id: GO:0005315
description: Inorganic phosphate transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0005315
golevel: 5
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0005315_Inorganic_phosphate_transmembrane_transporter_activity


id: GO:0005346
description: Purine ribonucleotide transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0005346
golevel: 4
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0005346_Purine_ribonucleotide_transmembrane_transporter_activity


id: GO:0006515
description: Protein quality control for misfolded or incompletely synthesized proteins
memo: https://amigo.geneontology.org/amigo/term/GO:0006515
golevel: 7
name:
  GOBP.STRING_v12.0_1336802_STRINGid_GO:0006515_Protein_quality_control_for_misfolded_or_incompletely_synthesized_proteins


id: GO:0006614
description: SRP-dependent cotranslational protein targeting to membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0006614
golevel: 6
name:
  GOBP.STRING_v12.0_1336802_STRINGid_GO:0006614_SRP-dependent_cotranslational_protein_targeting_to_membrane


id: GO:0008028
description: Monocarboxylic acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008028
golevel: 4
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0008028_Monocarboxylic_acid_transmembrane_transporter_activity


id: GO:0008124
description: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008124
golevel: 5
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0008124_4-alpha-hydroxytetrahydrobiopterin_dehydratase_activity


id: GO:0008271
description: Secondary active sulfate transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008271
golevel: 5
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0008271_Secondary_active_sulfate_transmembrane_transporter_activity


id: GO:0008444
description: CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008444
golevel: 6
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0008444_CDP-diacylglycerol-glycerol-3-phosphate_3-phosphatidyltransferase_activity


id: GO:0008534
description: Oxidized purine nucleobase lesion DNA N-glycosylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008534
golevel: 6
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0008534_Oxidized_purine_nucleobase_lesion_DNA_N-glycosylase_activity


id: GO:0008659
description: (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008659
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0008659_(3R)-hydroxymyristoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0008686
description: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008686
golevel: 4
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0008686_3,4-dihydroxy-2-butanone-4-phosphate_synthase_activity


id: GO:0008690
description: 3-deoxy-manno-octulosonate cytidylyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008690
golevel: 6
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0008690_3-deoxy-manno-octulosonate_cytidylyltransferase_activity


id: GO:0008693
description: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008693
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0008693_3-hydroxydecanoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0008697
description: 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008697
golevel: 5
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0008697_4-deoxy-L-threo-5-hexosulose-uronate_ketol-isomerase_activity


id: GO:0008703
description: 5-amino-6-(5-phosphoribosylamino)uracil reductase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008703
golevel: 5
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0008703_5-amino-6-(5-phosphoribosylamino)uracil_reductase_activity


id: GO:0008757
description: S-adenosylmethionine-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008757
golevel: 5
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0008757_S-adenosylmethionine-dependent_methyltransferase_activity


id: GO:0008759
description: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008759
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0008759_UDP-3-O-[3-hydroxymyristoyl]_N-acetylglucosamine_deacetylase_activity


id: GO:0008760
description: UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008760
golevel: 4
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0008760_UDP-N-acetylglucosamine_1-carboxyvinyltransferase_activity


id: GO:0008764
description: UDP-N-acetylmuramoylalanine-D-glutamate ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008764
golevel: 5
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0008764_UDP-N-acetylmuramoylalanine-D-glutamate_ligase_activity


id: GO:0008765
description: UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008765
golevel: 5
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0008765_UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate_ligase_activity


id: GO:0008766
description: UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008766
golevel: 5
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0008766_UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine_ligase_activity


id: GO:0008780
description: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008780
golevel: 6
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0008780_acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine_O-acyltransferase_activity


id: GO:0008817
description: cob(I)yrinic acid a,c-diamide adenosyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008817
golevel: 4
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0008817_cob(I)yrinic_acid_a,c-diamide_adenosyltransferase_activity


id: GO:0008835
description: Diaminohydroxyphosphoribosylaminopyrimidine deaminase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008835
golevel: 5
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0008835_Diaminohydroxyphosphoribosylaminopyrimidine_deaminase_activity


id: GO:0008961
description: Phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008961
golevel: 3
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0008961_Phosphatidylglycerol-prolipoprotein_diacylglyceryl_transferase_activity


id: GO:0008963
description: phospho-N-acetylmuramoyl-pentapeptide-transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008963
golevel: 5
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0008963_phospho-N-acetylmuramoyl-pentapeptide-transferase_activity


id: GO:0009007
description: Site-specific DNA-methyltransferase (adenine-specific) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0009007
golevel: 5
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0009007_Site-specific_DNA-methyltransferase_(adenine-specific)_activity


id: GO:0009095
description: Aromatic amino acid family biosynthetic process, prephenate pathway
memo: https://amigo.geneontology.org/amigo/term/GO:0009095
golevel: 7
name:
  GOBP.STRING_v12.0_1336802_STRINGid_GO:0009095_Aromatic_amino_acid_family_biosynthetic_process,_prephenate_pathway


id: GO:0009130
description: Pyrimidine nucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009130
golevel: 7
name:
  GOBP.STRING_v12.0_1336802_STRINGid_GO:0009130_Pyrimidine_nucleoside_monophosphate_biosynthetic_process


id: GO:0009148
description: Pyrimidine nucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009148
golevel: 7
name:
  GOBP.STRING_v12.0_1336802_STRINGid_GO:0009148_Pyrimidine_nucleoside_triphosphate_biosynthetic_process


id: GO:0009157
description: Deoxyribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009157
golevel: 7
name:
  GOBP.STRING_v12.0_1336802_STRINGid_GO:0009157_Deoxyribonucleoside_monophosphate_biosynthetic_process


id: GO:0009168
description: Purine ribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009168
golevel: 8
name:
  GOBP.STRING_v12.0_1336802_STRINGid_GO:0009168_Purine_ribonucleoside_monophosphate_biosynthetic_process


id: GO:0009173
description: Pyrimidine ribonucleoside monophosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009173
golevel: 8
name:
  GOBP.STRING_v12.0_1336802_STRINGid_GO:0009173_Pyrimidine_ribonucleoside_monophosphate_metabolic_process


id: GO:0009174
description: Pyrimidine ribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009174
golevel: 8
name:
  GOBP.STRING_v12.0_1336802_STRINGid_GO:0009174_Pyrimidine_ribonucleoside_monophosphate_biosynthetic_process


id: GO:0009175
description: Pyrimidine ribonucleoside monophosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009175
golevel: 8
name:
  GOBP.STRING_v12.0_1336802_STRINGid_GO:0009175_Pyrimidine_ribonucleoside_monophosphate_catabolic_process


id: GO:0009176
description: Pyrimidine deoxyribonucleoside monophosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009176
golevel: 8
name:
  GOBP.STRING_v12.0_1336802_STRINGid_GO:0009176_Pyrimidine_deoxyribonucleoside_monophosphate_metabolic_process


id: GO:0009177
description: Pyrimidine deoxyribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009177
golevel: 8
name:
  GOBP.STRING_v12.0_1336802_STRINGid_GO:0009177_Pyrimidine_deoxyribonucleoside_monophosphate_biosynthetic_process


id: GO:0009206
description: Purine ribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009206
golevel: 8
name:
  GOBP.STRING_v12.0_1336802_STRINGid_GO:0009206_Purine_ribonucleoside_triphosphate_biosynthetic_process


id: GO:0009208
description: Pyrimidine ribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009208
golevel: 8
name:
  GOBP.STRING_v12.0_1336802_STRINGid_GO:0009208_Pyrimidine_ribonucleoside_triphosphate_metabolic_process


id: GO:0009209
description: Pyrimidine ribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009209
golevel: 8
name:
  GOBP.STRING_v12.0_1336802_STRINGid_GO:0009209_Pyrimidine_ribonucleoside_triphosphate_biosynthetic_process


id: GO:0009210
description: Pyrimidine ribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009210
golevel: 8
name:
  GOBP.STRING_v12.0_1336802_STRINGid_GO:0009210_Pyrimidine_ribonucleoside_triphosphate_catabolic_process


id: GO:0009211
description: Pyrimidine deoxyribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009211
golevel: 8
name:
  GOBP.STRING_v12.0_1336802_STRINGid_GO:0009211_Pyrimidine_deoxyribonucleoside_triphosphate_metabolic_process


id: GO:0009212
description: Pyrimidine deoxyribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009212
golevel: 8
name:
  GOBP.STRING_v12.0_1336802_STRINGid_GO:0009212_Pyrimidine_deoxyribonucleoside_triphosphate_biosynthetic_process


id: GO:0009213
description: Pyrimidine deoxyribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009213
golevel: 8
name:
  GOBP.STRING_v12.0_1336802_STRINGid_GO:0009213_Pyrimidine_deoxyribonucleoside_triphosphate_catabolic_process


id: GO:0009215
description: Purine deoxyribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009215
golevel: 8
name:
  GOBP.STRING_v12.0_1336802_STRINGid_GO:0009215_Purine_deoxyribonucleoside_triphosphate_metabolic_process


id: GO:0009217
description: Purine deoxyribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009217
golevel: 8
name:
  GOBP.STRING_v12.0_1336802_STRINGid_GO:0009217_Purine_deoxyribonucleoside_triphosphate_catabolic_process


id: GO:0009678
description: Pyrophosphate hydrolysis-driven proton transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0009678
golevel: 5
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0009678_Pyrophosphate_hydrolysis-driven_proton_transmembrane_transporter_activity


id: GO:0010557
description: Positive regulation of macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010557
golevel: 7
name:
  GOBP.STRING_v12.0_1336802_STRINGid_GO:0010557_Positive_regulation_of_macromolecule_biosynthetic_process


id: GO:0010558
description: Negative regulation of macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010558
golevel: 7
name:
  GOBP.STRING_v12.0_1336802_STRINGid_GO:0010558_Negative_regulation_of_macromolecule_biosynthetic_process


id: GO:0010604
description: Positive regulation of macromolecule metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010604
golevel: 6
name:
  GOBP.STRING_v12.0_1336802_STRINGid_GO:0010604_Positive_regulation_of_macromolecule_metabolic_process


id: GO:0010605
description: Negative regulation of macromolecule metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010605
golevel: 6
name:
  GOBP.STRING_v12.0_1336802_STRINGid_GO:0010605_Negative_regulation_of_macromolecule_metabolic_process


id: GO:0015318
description: Inorganic molecular entity transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015318
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0015318_Inorganic_molecular_entity_transmembrane_transporter_activity


id: GO:0015453
description: Oxidoreduction-driven active transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015453
golevel: 5
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0015453_Oxidoreduction-driven_active_transmembrane_transporter_activity


id: GO:0015605
description: Organophosphate ester transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015605
golevel: 3
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0015605_Organophosphate_ester_transmembrane_transporter_activity


id: GO:0015932
description: Nucleobase-containing compound transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015932
golevel: 3
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0015932_Nucleobase-containing_compound_transmembrane_transporter_activity


id: GO:0016614
description: Oxidoreductase activity, acting on CH-OH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016614
golevel: 3
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0016614_Oxidoreductase_activity,_acting_on_CH-OH_group_of_donors


id: GO:0016616
description: Oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016616
golevel: 4
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0016616_Oxidoreductase_activity,_acting_on_the_CH-OH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016620
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016620
golevel: 4
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0016620_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016624
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016624
golevel: 4
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0016624_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_disulfide_as_acceptor


id: GO:0016627
description: Oxidoreductase activity, acting on the CH-CH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016627
golevel: 3
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0016627_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors


id: GO:0016628
description: Oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016628
golevel: 4
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0016628_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016634
description: Oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016634
golevel: 4
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0016634_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_oxygen_as_acceptor


id: GO:0016635
memo: https://amigo.geneontology.org/amigo/term/GO:0016635
golevel: 4
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0016635_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_quinone_or_related_compound_as_acceptor

description:
  Oxidoreductase activity, acting on the CH-CH group of donors, quinone or related compound as acceptor


id: GO:0016638
description: Oxidoreductase activity, acting on the CH-NH2 group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016638
golevel: 3
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0016638_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors


id: GO:0016639
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016639
golevel: 4
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0016639_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016641
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016641
golevel: 4
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0016641_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_oxygen_as_acceptor


id: GO:0016642
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016642
golevel: 4
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0016642_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_disulfide_as_acceptor


id: GO:0016645
description: Oxidoreductase activity, acting on the CH-NH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016645
golevel: 3
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0016645_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors


id: GO:0016646
description: Oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016646
golevel: 4
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0016646_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016653
description: Oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016653
golevel: 4
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0016653_Oxidoreductase_activity,_acting_on_NAD(P)H,_heme_protein_as_acceptor


id: GO:0016655
description: Oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016655
golevel: 4
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0016655_Oxidoreductase_activity,_acting_on_NAD(P)H,_quinone_or_similar_compound_as_acceptor


id: GO:0016667
description: Oxidoreductase activity, acting on a sulfur group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016667
golevel: 3
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0016667_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors


id: GO:0016668
description: Oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016668
golevel: 4
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0016668_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_NAD(P)_as_acceptor


id: GO:0016670
description: Oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016670
golevel: 4
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0016670_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_oxygen_as_acceptor


id: GO:0016671
description: Oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016671
golevel: 4
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0016671_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_disulfide_as_acceptor


id: GO:0016675
description: Oxidoreductase activity, acting on a heme group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016675
golevel: 3
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0016675_Oxidoreductase_activity,_acting_on_a_heme_group_of_donors


id: GO:0016684
description: Oxidoreductase activity, acting on peroxide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016684
golevel: 3
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0016684_Oxidoreductase_activity,_acting_on_peroxide_as_acceptor


id: GO:0016701
description: Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen
memo: https://amigo.geneontology.org/amigo/term/GO:0016701
golevel: 3
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0016701_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen


id: GO:0016702
memo: https://amigo.geneontology.org/amigo/term/GO:0016702
golevel: 4
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0016702_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen,_incorporation_of_two_atoms_of_oxygen

description:
  Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen


id: GO:0016703
memo: https://amigo.geneontology.org/amigo/term/GO:0016703
golevel: 4
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0016703_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen,_incorporation_of_one_atom_of_oxygen_(internal_monooxygenases_or_internal_mixed_function_oxidases)

description:
  Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)


id: GO:0016705
memo: https://amigo.geneontology.org/amigo/term/GO:0016705
golevel: 3
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0016705_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen


id: GO:0016709
memo: https://amigo.geneontology.org/amigo/term/GO:0016709
golevel: 4
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0016709_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen,_NAD(P)H_as_one_donor,_and_incorporation_of_one_atom_of_oxygen

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen


id: GO:0016712
memo: https://amigo.geneontology.org/amigo/term/GO:0016712
golevel: 4
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0016712_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen,_reduced_flavin_or_flavoprotein_as_one_donor,_and_incorporation_of_one_atom_of_oxygen

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen


id: GO:0016716
memo: https://amigo.geneontology.org/amigo/term/GO:0016716
golevel: 4
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0016716_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen,_another_compound_as_one_donor,_and_incorporation_of_one_atom_of_oxygen

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, another compound as one donor, and incorporation of one atom of oxygen


id: GO:0016717
memo: https://amigo.geneontology.org/amigo/term/GO:0016717
golevel: 4
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0016717_Oxidoreductase_activity,_acting_on_paired_donors,_with_oxidation_of_a_pair_of_donors_resulting_in_the_reduction_of_molecular_oxygen_to_two_molecules_of_water

description:
  Oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water


id: GO:0016721
description: Oxidoreductase activity, acting on superoxide radicals as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016721
golevel: 3
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0016721_Oxidoreductase_activity,_acting_on_superoxide_radicals_as_acceptor


id: GO:0016726
description: Oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016726
golevel: 4
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0016726_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_NAD_or_NADP_as_acceptor


id: GO:0016728
description: Oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016728
golevel: 4
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0016728_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_disulfide_as_acceptor


id: GO:0016730
description: Oxidoreductase activity, acting on iron-sulfur proteins as donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016730
golevel: 3
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0016730_Oxidoreductase_activity,_acting_on_iron-sulfur_proteins_as_donors


id: GO:0016731
description: Oxidoreductase activity, acting on iron-sulfur proteins as donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016731
golevel: 4
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0016731_Oxidoreductase_activity,_acting_on_iron-sulfur_proteins_as_donors,_NAD_or_NADP_as_acceptor


id: GO:0016742
description: Hydroxymethyl-, formyl- and related transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0016742
golevel: 4
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0016742_Hydroxymethyl-,_formyl-_and_related_transferase_activity


id: GO:0016747
description: Acyltransferase activity, transferring groups other than amino-acyl groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016747
golevel: 4
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0016747_Acyltransferase_activity,_transferring_groups_other_than_amino-acyl_groups


id: GO:0016765
description: Transferase activity, transferring alkyl or aryl (other than methyl) groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016765
golevel: 3
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0016765_Transferase_activity,_transferring_alkyl_or_aryl_(other_than_methyl)_groups


id: GO:0016772
description: Transferase activity, transferring phosphorus-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016772
golevel: 3
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0016772_Transferase_activity,_transferring_phosphorus-containing_groups


id: GO:0016773
description: Phosphotransferase activity, alcohol group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016773
golevel: 4
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0016773_Phosphotransferase_activity,_alcohol_group_as_acceptor


id: GO:0016774
description: Phosphotransferase activity, carboxyl group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016774
golevel: 4
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0016774_Phosphotransferase_activity,_carboxyl_group_as_acceptor


id: GO:0016775
description: Phosphotransferase activity, nitrogenous group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016775
golevel: 4
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0016775_Phosphotransferase_activity,_nitrogenous_group_as_acceptor


id: GO:0016776
description: Phosphotransferase activity, phosphate group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016776
golevel: 4
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0016776_Phosphotransferase_activity,_phosphate_group_as_acceptor


id: GO:0016780
description: Phosphotransferase activity, for other substituted phosphate groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016780
golevel: 4
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0016780_Phosphotransferase_activity,_for_other_substituted_phosphate_groups


id: GO:0016782
description: Transferase activity, transferring sulphur-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016782
golevel: 3
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0016782_Transferase_activity,_transferring_sulphur-containing_groups


id: GO:0016796
memo: https://amigo.geneontology.org/amigo/term/GO:0016796
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0016796_Exonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_5-phosphomonoesters

description:
  Exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5-phosphomonoesters


id: GO:0016810
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
memo: https://amigo.geneontology.org/amigo/term/GO:0016810
golevel: 3
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0016810_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds


id: GO:0016811
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
memo: https://amigo.geneontology.org/amigo/term/GO:0016811
golevel: 4
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0016811_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_linear_amides


id: GO:0016812
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
memo: https://amigo.geneontology.org/amigo/term/GO:0016812
golevel: 4
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0016812_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_cyclic_amides


id: GO:0016813
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines
memo: https://amigo.geneontology.org/amigo/term/GO:0016813
golevel: 4
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0016813_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_linear_amidines


id: GO:0016814
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines
memo: https://amigo.geneontology.org/amigo/term/GO:0016814
golevel: 4
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0016814_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_cyclic_amidines


id: GO:0016818
description: Hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
memo: https://amigo.geneontology.org/amigo/term/GO:0016818
golevel: 4
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0016818_Hydrolase_activity,_acting_on_acid_anhydrides,_in_phosphorus-containing_anhydrides


id: GO:0016822
description: Hydrolase activity, acting on acid carbon-carbon bonds
memo: https://amigo.geneontology.org/amigo/term/GO:0016822
golevel: 3
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0016822_Hydrolase_activity,_acting_on_acid_carbon-carbon_bonds


id: GO:0016823
description: Hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances
memo: https://amigo.geneontology.org/amigo/term/GO:0016823
golevel: 4
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0016823_Hydrolase_activity,_acting_on_acid_carbon-carbon_bonds,_in_ketonic_substances


id: GO:0016825
description: Hydrolase activity, acting on acid phosphorus-nitrogen bonds
memo: https://amigo.geneontology.org/amigo/term/GO:0016825
golevel: 3
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0016825_Hydrolase_activity,_acting_on_acid_phosphorus-nitrogen_bonds


id: GO:0016837
description: Carbon-oxygen lyase activity, acting on polysaccharides
memo: https://amigo.geneontology.org/amigo/term/GO:0016837
golevel: 4
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0016837_Carbon-oxygen_lyase_activity,_acting_on_polysaccharides


id: GO:0016855
description: Racemase and epimerase activity, acting on amino acids and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0016855
golevel: 4
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0016855_Racemase_and_epimerase_activity,_acting_on_amino_acids_and_derivatives


id: GO:0016857
description: Racemase and epimerase activity, acting on carbohydrates and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0016857
golevel: 4
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0016857_Racemase_and_epimerase_activity,_acting_on_carbohydrates_and_derivatives


id: GO:0016861
description: Intramolecular oxidoreductase activity, interconverting aldoses and ketoses
memo: https://amigo.geneontology.org/amigo/term/GO:0016861
golevel: 4
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0016861_Intramolecular_oxidoreductase_activity,_interconverting_aldoses_and_ketoses


id: GO:0016863
description: Intramolecular oxidoreductase activity, transposing C=C bonds
memo: https://amigo.geneontology.org/amigo/term/GO:0016863
golevel: 4
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0016863_Intramolecular_oxidoreductase_activity,_transposing_C=C_bonds


id: GO:0016868
description: Intramolecular transferase activity, phosphotransferases
memo: https://amigo.geneontology.org/amigo/term/GO:0016868
golevel: 4
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0016868_Intramolecular_transferase_activity,_phosphotransferases


id: GO:0016869
description: Intramolecular transferase activity, transferring amino groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016869
golevel: 4
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0016869_Intramolecular_transferase_activity,_transferring_amino_groups


id: GO:0016884
description: Carbon-nitrogen ligase activity, with glutamine as amido-N-donor
memo: https://amigo.geneontology.org/amigo/term/GO:0016884
golevel: 4
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0016884_Carbon-nitrogen_ligase_activity,_with_glutamine_as_amido-N-donor


id: GO:0016888
description: Endodeoxyribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016888
golevel: 4
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0016888_Endodeoxyribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016889
description: Endodeoxyribonuclease activity, producing 3-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016889
golevel: 4
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0016889_Endodeoxyribonuclease_activity,_producing_3-phosphomonoesters


id: GO:0016891
description: Endoribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016891
golevel: 4
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0016891_Endoribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016893
memo: https://amigo.geneontology.org/amigo/term/GO:0016893
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0016893_Endonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_5-phosphomonoesters

description:
  Endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5-phosphomonoesters


id: GO:0016894
memo: https://amigo.geneontology.org/amigo/term/GO:0016894
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0016894_Endonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_3-phosphomonoesters

description:
  Endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3-phosphomonoesters


id: GO:0016895
description: Exodeoxyribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016895
golevel: 6
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0016895_Exodeoxyribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016896
description: Exoribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016896
golevel: 6
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0016896_Exoribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016903
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016903
golevel: 3
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0016903_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors


id: GO:0018339
description: peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid
memo: https://amigo.geneontology.org/amigo/term/GO:0018339
golevel: 8
name:
  GOBP.STRING_v12.0_1336802_STRINGid_GO:0018339_peptidyl-L-beta-methylthioaspartic_acid_biosynthetic_process_from_peptidyl-aspartic_acid


id: GO:0019171
description: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0019171
golevel: 5
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0019171_3-hydroxyacyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0019219
description: Regulation of nucleobase-containing compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0019219
golevel: 6
name:
  GOBP.STRING_v12.0_1336802_STRINGid_GO:0019219_Regulation_of_nucleobase-containing_compound_metabolic_process


id: GO:0019243
description: Methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione
memo: https://amigo.geneontology.org/amigo/term/GO:0019243
golevel: 7
name:
  GOBP.STRING_v12.0_1336802_STRINGid_GO:0019243_Methylglyoxal_catabolic_process_to_D-lactate_via_S-lactoyl-glutathione


id: GO:0019287
description: Isopentenyl diphosphate biosynthetic process, mevalonate pathway
memo: https://amigo.geneontology.org/amigo/term/GO:0019287
golevel: 6
name:
  GOBP.STRING_v12.0_1336802_STRINGid_GO:0019287_Isopentenyl_diphosphate_biosynthetic_process,_mevalonate_pathway


id: GO:0019556
description: Histidine catabolic process to glutamate and formamide
memo: https://amigo.geneontology.org/amigo/term/GO:0019556
golevel: 5
name:
  GOBP.STRING_v12.0_1336802_STRINGid_GO:0019556_Histidine_catabolic_process_to_glutamate_and_formamide


id: GO:0019829
description: ATPase-coupled cation transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0019829
golevel: 3
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0019829_ATPase-coupled_cation_transmembrane_transporter_activity


id: GO:0030435
description: Sporulation resulting in formation of a cellular spore
memo: https://amigo.geneontology.org/amigo/term/GO:0030435
golevel: 3
name:
  GOBP.STRING_v12.0_1336802_STRINGid_GO:0030435_Sporulation_resulting_in_formation_of_a_cellular_spore


id: GO:0030613
description: Oxidoreductase activity, acting on phosphorus or arsenic in donors
memo: https://amigo.geneontology.org/amigo/term/GO:0030613
golevel: 3
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0030613_Oxidoreductase_activity,_acting_on_phosphorus_or_arsenic_in_donors


id: GO:0030614
description: Oxidoreductase activity, acting on phosphorus or arsenic in donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0030614
golevel: 4
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0030614_Oxidoreductase_activity,_acting_on_phosphorus_or_arsenic_in_donors,_disulfide_as_acceptor


id: GO:0031235
description: Intrinsic component of the cytoplasmic side of the plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031235
name:
  GOCC.STRING_v12.0_1336802_STRINGid_GO:0031235_Intrinsic_component_of_the_cytoplasmic_side_of_the_plasma_membrane


id: GO:0031250
description: Anaerobic ribonucleoside-triphosphate reductase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0031250
golevel: 3
name:
  GOCC.STRING_v12.0_1336802_STRINGid_GO:0031250_Anaerobic_ribonucleoside-triphosphate_reductase_complex


id: GO:0031554
description: Regulation of DNA-templated transcription, termination
memo: https://amigo.geneontology.org/amigo/term/GO:0031554
golevel: 6
name:
  GOBP.STRING_v12.0_1336802_STRINGid_GO:0031554_Regulation_of_DNA-templated_transcription,_termination


id: GO:0033177
description: Proton-transporting two-sector ATPase complex, proton-transporting domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033177
golevel: 3
name:
  GOCC.STRING_v12.0_1336802_STRINGid_GO:0033177_Proton-transporting_two-sector_ATPase_complex,_proton-transporting_domain


id: GO:0033178
description: Proton-transporting two-sector ATPase complex, catalytic domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033178
golevel: 3
name:
  GOCC.STRING_v12.0_1336802_STRINGid_GO:0033178_Proton-transporting_two-sector_ATPase_complex,_catalytic_domain


id: GO:0033362
description: Lysine biosynthetic process via diaminopimelate, diaminopimelate-aminotransferase pathway
memo: https://amigo.geneontology.org/amigo/term/GO:0033362
golevel: 9
name:
  GOBP.STRING_v12.0_1336802_STRINGid_GO:0033362_Lysine_biosynthetic_process_via_diaminopimelate,_diaminopimelate-aminotransferase_pathway


id: GO:0033467
description: CMP-keto-3-deoxy-D-manno-octulosonic acid metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0033467
name:
  GOBP.STRING_v12.0_1336802_STRINGid_GO:0033467_CMP-keto-3-deoxy-D-manno-octulosonic_acid_metabolic_process


id: GO:0033468
description: CMP-keto-3-deoxy-D-manno-octulosonic acid biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0033468
golevel: 6
name:
  GOBP.STRING_v12.0_1336802_STRINGid_GO:0033468_CMP-keto-3-deoxy-D-manno-octulosonic_acid_biosynthetic_process


id: GO:0033512
description: L-lysine catabolic process to acetyl-CoA via saccharopine
memo: https://amigo.geneontology.org/amigo/term/GO:0033512
golevel: 6
name:
  GOBP.STRING_v12.0_1336802_STRINGid_GO:0033512_L-lysine_catabolic_process_to_acetyl-CoA_via_saccharopine


id: GO:0033695
description: Oxidoreductase activity, acting on CH or CH2 groups, quinone or similar compound as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0033695
golevel: 4
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0033695_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_quinone_or_similar_compound_as_acceptor


id: GO:0033744
description: L-methionine:thioredoxin-disulfide S-oxidoreductase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033744
golevel: 5
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0033744_L-methionine:thioredoxin-disulfide_S-oxidoreductase_activity


id: GO:0033764
description: Steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0033764
golevel: 4
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0033764_Steroid_dehydrogenase_activity,_acting_on_the_CH-OH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0033818
description: Beta-ketoacyl-acyl-carrier-protein synthase III activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033818
golevel: 5
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0033818_Beta-ketoacyl-acyl-carrier-protein_synthase_III_activity


id: GO:0034023
description: 5-(carboxyamino)imidazole ribonucleotide mutase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0034023
golevel: 4
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0034023_5-(carboxyamino)imidazole_ribonucleotide_mutase_activity


id: GO:0034028
description: 5-(carboxyamino)imidazole ribonucleotide synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0034028
golevel: 4
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0034028_5-(carboxyamino)imidazole_ribonucleotide_synthase_activity


id: GO:0034249
description: Negative regulation of cellular amide metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034249
golevel: 6
name:
  GOBP.STRING_v12.0_1336802_STRINGid_GO:0034249_Negative_regulation_of_cellular_amide_metabolic_process


id: GO:0034250
description: Positive regulation of cellular amide metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034250
golevel: 6
name:
  GOBP.STRING_v12.0_1336802_STRINGid_GO:0034250_Positive_regulation_of_cellular_amide_metabolic_process


id: GO:0034257
description: Nicotinamide riboside transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0034257
golevel: 5
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0034257_Nicotinamide_riboside_transmembrane_transporter_activity


id: GO:0034404
description: Nucleobase-containing small molecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034404
golevel: 5
name:
  GOBP.STRING_v12.0_1336802_STRINGid_GO:0034404_Nucleobase-containing_small_molecule_biosynthetic_process


id: GO:0034656
description: Nucleobase-containing small molecule catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034656
golevel: 5
name:
  GOBP.STRING_v12.0_1336802_STRINGid_GO:0034656_Nucleobase-containing_small_molecule_catabolic_process


id: GO:0035592
description: Establishment of protein localization to extracellular region
memo: https://amigo.geneontology.org/amigo/term/GO:0035592
golevel: 4
name:
  GOBP.STRING_v12.0_1336802_STRINGid_GO:0035592_Establishment_of_protein_localization_to_extracellular_region


id: GO:0035998
description: 7,8-dihydroneopterin 3-triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0035998
name:
  GOBP.STRING_v12.0_1336802_STRINGid_GO:0035998_7,8-dihydroneopterin_3-triphosphate_biosynthetic_process


id: GO:0036361
description: Racemase activity, acting on amino acids and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0036361
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0036361_Racemase_activity,_acting_on_amino_acids_and_derivatives


id: GO:0042083
description: 5,10-methylenetetrahydrofolate-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0042083
golevel: 5
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0042083_5,10-methylenetetrahydrofolate-dependent_methyltransferase_activity


id: GO:0042084
description: 5-methyltetrahydrofolate-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0042084
golevel: 5
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0042084_5-methyltetrahydrofolate-dependent_methyltransferase_activity


id: GO:0042777
description: Proton motive force-driven plasma membrane ATP synthesis
memo: https://amigo.geneontology.org/amigo/term/GO:0042777
golevel: 9
name:
  GOBP.STRING_v12.0_1336802_STRINGid_GO:0042777_Proton_motive_force-driven_plasma_membrane_ATP_synthesis


id: GO:0044419
description: Biological process involved in interspecies interaction between organisms
memo: https://amigo.geneontology.org/amigo/term/GO:0044419
golevel: 1
name:
  GOBP.STRING_v12.0_1336802_STRINGid_GO:0044419_Biological_process_involved_in_interspecies_interaction_between_organisms


id: GO:0044769
description: ATPase activity, coupled to transmembrane movement of ions, rotational mechanism
memo: https://amigo.geneontology.org/amigo/term/GO:0044769
golevel: 4
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0044769_ATPase_activity,_coupled_to_transmembrane_movement_of_ions,_rotational_mechanism


id: GO:0045156
memo: https://amigo.geneontology.org/amigo/term/GO:0045156
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0045156_Electron_transporter,_transferring_electrons_within_the_cyclic_electron_transport_pathway_of_photosynthesis_activity

description:
  Electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity


id: GO:0045261
description: Proton-transporting ATP synthase complex, catalytic core F(1)
memo: https://amigo.geneontology.org/amigo/term/GO:0045261
name:
  GOCC.STRING_v12.0_1336802_STRINGid_GO:0045261_Proton-transporting_ATP_synthase_complex,_catalytic_core_F(1)


id: GO:0045263
description: Proton-transporting ATP synthase complex, coupling factor F(o)
memo: https://amigo.geneontology.org/amigo/term/GO:0045263
name:
  GOCC.STRING_v12.0_1336802_STRINGid_GO:0045263_Proton-transporting_ATP_synthase_complex,_coupling_factor_F(o)


id: GO:0045934
description: Negative regulation of nucleobase-containing compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0045934
golevel: 6
name:
  GOBP.STRING_v12.0_1336802_STRINGid_GO:0045934_Negative_regulation_of_nucleobase-containing_compound_metabolic_process


id: GO:0045935
description: Positive regulation of nucleobase-containing compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0045935
name:
  GOBP.STRING_v12.0_1336802_STRINGid_GO:0045935_Positive_regulation_of_nucleobase-containing_compound_metabolic_process


id: GO:0046537
description: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0046537
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0046537_2,3-bisphosphoglycerate-independent_phosphoglycerate_mutase_activity


id: GO:0046912
description: Acyltransferase activity, acyl groups converted into alkyl on transfer
memo: https://amigo.geneontology.org/amigo/term/GO:0046912
golevel: 4
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0046912_Acyltransferase_activity,_acyl_groups_converted_into_alkyl_on_transfer


id: GO:0046915
description: Transition metal ion transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0046915
golevel: 6
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0046915_Transition_metal_ion_transmembrane_transporter_activity


id: GO:0046933
description: Proton-transporting ATP synthase activity, rotational mechanism
memo: https://amigo.geneontology.org/amigo/term/GO:0046933
golevel: 3
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0046933_Proton-transporting_ATP_synthase_activity,_rotational_mechanism


id: GO:0046961
description: Proton-transporting ATPase activity, rotational mechanism
memo: https://amigo.geneontology.org/amigo/term/GO:0046961
golevel: 4
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0046961_Proton-transporting_ATPase_activity,_rotational_mechanism


id: GO:0047001
description: 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0047001
golevel: 5
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0047001_2-dehydro-3-deoxy-D-gluconate_5-dehydrogenase_activity


id: GO:0047451
description: 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0047451
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0047451_3-hydroxyoctanoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0047480
description: UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0047480
golevel: 5
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0047480_UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine_ligase_activity


id: GO:0048646
description: Anatomical structure formation involved in morphogenesis
memo: https://amigo.geneontology.org/amigo/term/GO:0048646
golevel: 2
name:
  GOBP.STRING_v12.0_1336802_STRINGid_GO:0048646_Anatomical_structure_formation_involved_in_morphogenesis


id: GO:0050486
description: Intramolecular transferase activity, transferring hydroxy groups
memo: https://amigo.geneontology.org/amigo/term/GO:0050486
golevel: 4
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0050486_Intramolecular_transferase_activity,_transferring_hydroxy_groups


id: GO:0050511
description: Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050511
golevel: 6
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0050511_Undecaprenyldiphospho-muramoylpentapeptide_beta-N-acetylglucosaminyltransferase_activity


id: GO:0050567
description: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050567
golevel: 5
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0050567_glutaminyl-tRNA_synthase_(glutamine-hydrolyzing)_activity


id: GO:0051003
description: Ligase activity, forming nitrogen-metal bonds, forming coordination complexes
memo: https://amigo.geneontology.org/amigo/term/GO:0051003
golevel: 4
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0051003_Ligase_activity,_forming_nitrogen-metal_bonds,_forming_coordination_complexes


id: GO:0051075
description: S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0051075
golevel: 3
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0051075_S-adenosylmethionine:tRNA_ribosyltransferase-isomerase_activity


id: GO:0051172
description: Negative regulation of nitrogen compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0051172
name:
  GOBP.STRING_v12.0_1336802_STRINGid_GO:0051172_Negative_regulation_of_nitrogen_compound_metabolic_process


id: GO:0051173
description: Positive regulation of nitrogen compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0051173
name:
  GOBP.STRING_v12.0_1336802_STRINGid_GO:0051173_Positive_regulation_of_nitrogen_compound_metabolic_process


id: GO:0051703
description: Biological process involved in intraspecies interaction between organisms
memo: https://amigo.geneontology.org/amigo/term/GO:0051703
golevel: 1
name:
  GOBP.STRING_v12.0_1336802_STRINGid_GO:0051703_Biological_process_involved_in_intraspecies_interaction_between_organisms


id: GO:0051991
memo: https://amigo.geneontology.org/amigo/term/GO:0051991
golevel: 6
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0051991_UDP-N-acetyl-D-glucosamine:N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenol_4-beta-N-acetylglucosaminlytransferase_activity

description:
  UDP-N-acetyl-D-glucosamine:N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenol 4-beta-N-acetylglucosaminlytransferase activity


id: GO:0051992
memo: https://amigo.geneontology.org/amigo/term/GO:0051992
golevel: 5
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0051992_UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine:undecaprenyl-phosphate_transferase_activity

description:
  UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine:undecaprenyl-phosphate transferase activity


id: GO:0052907
description: 23S rRNA (adenine(1618)-N(6))-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0052907
golevel: 7
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0052907_23S_rRNA_(adenine(1618)-N(6))-methyltransferase_activity


id: GO:0052908
description: 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0052908
golevel: 7
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0052908_16S_rRNA_(adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase_activity


id: GO:0055086
description: Nucleobase-containing small molecule metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0055086
golevel: 4
name:
  GOBP.STRING_v12.0_1336802_STRINGid_GO:0055086_Nucleobase-containing_small_molecule_metabolic_process


id: GO:0061695
description: Transferase complex, transferring phosphorus-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0061695
golevel: 4
name:
  GOCC.STRING_v12.0_1336802_STRINGid_GO:0061695_Transferase_complex,_transferring_phosphorus-containing_groups


id: GO:0070204
description: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0070204
golevel: 4
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0070204_2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid_synthase_activity


id: GO:0070626
memo: https://amigo.geneontology.org/amigo/term/GO:0070626
golevel: 5
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0070626_(S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)_succinate_lyase_(fumarate-forming)_activity

description:
  (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido) succinate lyase (fumarate-forming) activity


id: GO:0070647
description: Protein modification by small protein conjugation or removal
memo: https://amigo.geneontology.org/amigo/term/GO:0070647
golevel: 7
name:
  GOBP.STRING_v12.0_1336802_STRINGid_GO:0070647_Protein_modification_by_small_protein_conjugation_or_removal


id: GO:0071951
description: Conversion of methionyl-tRNA to N-formyl-methionyl-tRNA
memo: https://amigo.geneontology.org/amigo/term/GO:0071951
golevel: 8
name:
  GOBP.STRING_v12.0_1336802_STRINGid_GO:0071951_Conversion_of_methionyl-tRNA_to_N-formyl-methionyl-tRNA


id: GO:0072599
description: Establishment of protein localization to endoplasmic reticulum
memo: https://amigo.geneontology.org/amigo/term/GO:0072599
golevel: 5
name:
  GOBP.STRING_v12.0_1336802_STRINGid_GO:0072599_Establishment_of_protein_localization_to_endoplasmic_reticulum


id: GO:0097174
description: 1,6-anhydro-N-acetyl-beta-muramic acid metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0097174
name:
  GOBP.STRING_v12.0_1336802_STRINGid_GO:0097174_1,6-anhydro-N-acetyl-beta-muramic_acid_metabolic_process


id: GO:0097175
description: 1,6-anhydro-N-acetyl-beta-muramic acid catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0097175
golevel: 8
name:
  GOBP.STRING_v12.0_1336802_STRINGid_GO:0097175_1,6-anhydro-N-acetyl-beta-muramic_acid_catabolic_process


id: GO:0097588
description: Archaeal or bacterial-type flagellum-dependent cell motility
memo: https://amigo.geneontology.org/amigo/term/GO:0097588
golevel: 4
name:
  GOBP.STRING_v12.0_1336802_STRINGid_GO:0097588_Archaeal_or_bacterial-type_flagellum-dependent_cell_motility


id: GO:0098519
description: Nucleotide phosphatase activity, acting on free nucleotides
memo: https://amigo.geneontology.org/amigo/term/GO:0098519
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0098519_Nucleotide_phosphatase_activity,_acting_on_free_nucleotides


id: GO:0102027
description: S-adenosylmethionine:2-demethylquinol-8 methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0102027
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0102027_S-adenosylmethionine:2-demethylquinol-8_methyltransferase_activity


id: GO:0102094
description: S-adenosylmethionine:2-demethylmenaquinol methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0102094
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0102094_S-adenosylmethionine:2-demethylmenaquinol_methyltransferase_activity


id: GO:0102552
description: Lipoyl synthase activity (acting on glycine-cleavage complex H protein
memo: https://amigo.geneontology.org/amigo/term/GO:0102552
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0102552_Lipoyl_synthase_activity_(acting_on_glycine-cleavage_complex_H_protein


id: GO:0102553
description: Lipoyl synthase activity (acting on pyruvate dehydrogenase E2 protein)
memo: https://amigo.geneontology.org/amigo/term/GO:0102553
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0102553_Lipoyl_synthase_activity_(acting_on_pyruvate_dehydrogenase_E2_protein)


id: GO:0102752
memo: https://amigo.geneontology.org/amigo/term/GO:0102752
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0102752_1,4-alpha-glucan_branching_enzyme_activity_(using_a_glucosylated_glycogenin_as_primer_for_glycogen_synthesis)

description:
  1,4-alpha-glucan branching enzyme activity (using a glucosylated glycogenin as primer for glycogen synthesis)


id: GO:0102955
description: S-adenosylmethionine:2-demethylmenaquinol-7 methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0102955
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0102955_S-adenosylmethionine:2-demethylmenaquinol-7_methyltransferase_activity


id: GO:0106074
description: aminoacyl-tRNA metabolism involved in translational fidelity
memo: https://amigo.geneontology.org/amigo/term/GO:0106074
golevel: 4
name:
  GOBP.STRING_v12.0_1336802_STRINGid_GO:0106074_aminoacyl-tRNA_metabolism_involved_in_translational_fidelity


id: GO:0140078
description: Class I DNA-(apurinic or apyrimidinic site) endonuclease activity
memo: https://amigo.geneontology.org/amigo/term/GO:0140078
golevel: 4
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:0140078_Class_I_DNA-(apurinic_or_apyrimidinic_site)_endonuclease_activity


id: GO:1900191
description: Negative regulation of single-species biofilm formation
memo: https://amigo.geneontology.org/amigo/term/GO:1900191
golevel: 5
name:
  GOBP.STRING_v12.0_1336802_STRINGid_GO:1900191_Negative_regulation_of_single-species_biofilm_formation


id: GO:1901505
description: Carbohydrate derivative transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:1901505
golevel: 3
name:
  GOMF.STRING_v12.0_1336802_STRINGid_GO:1901505_Carbohydrate_derivative_transmembrane_transporter_activity


id: GO:1902021
description: Regulation of bacterial-type flagellum-dependent cell motility
memo: https://amigo.geneontology.org/amigo/term/GO:1902021
golevel: 5
name:
  GOBP.STRING_v12.0_1336802_STRINGid_GO:1902021_Regulation_of_bacterial-type_flagellum-dependent_cell_motility


id: GO:1902221
description: Erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:1902221
name:
  GOBP.STRING_v12.0_1336802_STRINGid_GO:1902221_Erythrose_4-phosphate/phosphoenolpyruvate_family_amino_acid_metabolic_process


id: GO:1902222
description: Erythrose 4-phosphate/phosphoenolpyruvate family amino acid catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:1902222
name:
  GOBP.STRING_v12.0_1336802_STRINGid_GO:1902222_Erythrose_4-phosphate/phosphoenolpyruvate_family_amino_acid_catabolic_process


id: GO:1902223
description: Erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:1902223
name:
  GOBP.STRING_v12.0_1336802_STRINGid_GO:1902223_Erythrose_4-phosphate/phosphoenolpyruvate_family_amino_acid_biosynthetic_process


id: GO:1903507
description: Negative regulation of nucleic acid-templated transcription
memo: https://amigo.geneontology.org/amigo/term/GO:1903507
name:
  GOBP.STRING_v12.0_1336802_STRINGid_GO:1903507_Negative_regulation_of_nucleic_acid-templated_transcription


id: GO:1903508
description: Positive regulation of nucleic acid-templated transcription
memo: https://amigo.geneontology.org/amigo/term/GO:1903508
name:
  GOBP.STRING_v12.0_1336802_STRINGid_GO:1903508_Positive_regulation_of_nucleic_acid-templated_transcription


id: GO:1904951
description: Positive regulation of establishment of protein localization
memo: https://amigo.geneontology.org/amigo/term/GO:1904951
golevel: 4
name:
  GOBP.STRING_v12.0_1336802_STRINGid_GO:1904951_Positive_regulation_of_establishment_of_protein_localization


id: GO:2000112
description: Regulation of cellular macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:2000112
name:
  GOBP.STRING_v12.0_1336802_STRINGid_GO:2000112_Regulation_of_cellular_macromolecule_biosynthetic_process


id: GO:2000113
description: Negative regulation of cellular macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:2000113
name:
  GOBP.STRING_v12.0_1336802_STRINGid_GO:2000113_Negative_regulation_of_cellular_macromolecule_biosynthetic_process


id: GOCC:0000015
description: Phosphopyruvate hydratase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000015
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0000015_Phosphopyruvate_hydratase_complex


id: GOCC:0000138
description: Golgi trans cisterna
memo: https://amigo.geneontology.org/amigo/term/GO:0000138
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0000138_Golgi_trans_cisterna


id: GOCC:0000151
description: Ubiquitin ligase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000151
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0000151_Ubiquitin_ligase_complex


id: GOCC:0000313
description: Organellar ribosome
memo: https://amigo.geneontology.org/amigo/term/GO:0000313
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0000313_Organellar_ribosome


id: GOCC:0000314
description: Organellar small ribosomal subunit
memo: https://amigo.geneontology.org/amigo/term/GO:0000314
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0000314_Organellar_small_ribosomal_subunit


id: GOCC:0000325
description: Plant-type vacuole
memo: https://amigo.geneontology.org/amigo/term/GO:0000325
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0000325_Plant-type_vacuole


id: GOCC:0000345
description: Cytosolic DNA-directed RNA polymerase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000345
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0000345_Cytosolic_DNA-directed_RNA_polymerase_complex


id: GOCC:0000408
description: EKC/KEOPS complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000408
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0000408_EKC/KEOPS_complex


id: GOCC:0000428
description: DNA-directed RNA polymerase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000428
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0000428_DNA-directed_RNA_polymerase_complex


id: GOCC:0000502
description: Proteasome complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000502
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0000502_Proteasome_complex


id: GOCC:0000781
description: Chromosome, telomeric region
memo: https://amigo.geneontology.org/amigo/term/GO:0000781
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0000781_Chromosome,_telomeric_region


id: GOCC:0000930
description: Gamma-tubulin complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000930
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0000930_Gamma-tubulin_complex


id: GOCC:0000931
description: Gamma-tubulin large complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000931
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0000931_Gamma-tubulin_large_complex


id: GOCC:0002189
description: Ribose phosphate diphosphokinase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0002189
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0002189_Ribose_phosphate_diphosphokinase_complex


id: GOCC:0005576
description: Extracellular region
memo: https://amigo.geneontology.org/amigo/term/GO:0005576
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0005576_Extracellular_region


id: GOCC:0005604
description: Basement membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0005604
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0005604_Basement_membrane


id: GOCC:0005615
description: Extracellular space
memo: https://amigo.geneontology.org/amigo/term/GO:0005615
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0005615_Extracellular_space


id: GOCC:0005727
description: Extrachromosomal circular DNA
memo: https://amigo.geneontology.org/amigo/term/GO:0005727
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0005727_Extrachromosomal_circular_DNA


id: GOCC:0005740
description: Mitochondrial envelope
memo: https://amigo.geneontology.org/amigo/term/GO:0005740
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0005740_Mitochondrial_envelope


id: GOCC:0005741
description: Mitochondrial outer membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0005741
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0005741_Mitochondrial_outer_membrane


id: GOCC:0005743
description: Mitochondrial inner membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0005743
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0005743_Mitochondrial_inner_membrane


id: GOCC:0005746
description: Mitochondrial respirasome
memo: https://amigo.geneontology.org/amigo/term/GO:0005746
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0005746_Mitochondrial_respirasome


id: GOCC:0005747
description: Mitochondrial respiratory chain complex I
memo: https://amigo.geneontology.org/amigo/term/GO:0005747
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0005747_Mitochondrial_respiratory_chain_complex_I


id: GOCC:0005758
description: Mitochondrial intermembrane space
memo: https://amigo.geneontology.org/amigo/term/GO:0005758
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0005758_Mitochondrial_intermembrane_space


id: GOCC:0005759
description: Mitochondrial matrix
memo: https://amigo.geneontology.org/amigo/term/GO:0005759
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0005759_Mitochondrial_matrix


id: GOCC:0005761
description: Mitochondrial ribosome
memo: https://amigo.geneontology.org/amigo/term/GO:0005761
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0005761_Mitochondrial_ribosome


id: GOCC:0005763
description: Mitochondrial small ribosomal subunit
memo: https://amigo.geneontology.org/amigo/term/GO:0005763
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0005763_Mitochondrial_small_ribosomal_subunit


id: GOCC:0005765
description: Lysosomal membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0005765
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0005765_Lysosomal_membrane


id: GOCC:0005774
description: Vacuolar membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0005774
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0005774_Vacuolar_membrane


id: GOCC:0005778
description: Peroxisomal membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0005778
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0005778_Peroxisomal_membrane


id: GOCC:0005783
description: Endoplasmic reticulum
memo: https://amigo.geneontology.org/amigo/term/GO:0005783
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0005783_Endoplasmic_reticulum


id: GOCC:0005788
description: Endoplasmic reticulum lumen
memo: https://amigo.geneontology.org/amigo/term/GO:0005788
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0005788_Endoplasmic_reticulum_lumen


id: GOCC:0005789
description: Endoplasmic reticulum membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0005789
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0005789_Endoplasmic_reticulum_membrane


id: GOCC:0005791
description: Rough endoplasmic reticulum
memo: https://amigo.geneontology.org/amigo/term/GO:0005791
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0005791_Rough_endoplasmic_reticulum


id: GOCC:0005793
description: Endoplasmic reticulum-Golgi intermediate compartment
memo: https://amigo.geneontology.org/amigo/term/GO:0005793
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0005793_Endoplasmic_reticulum-Golgi_intermediate_compartment


id: GOCC:0005798
description: Golgi-associated vesicle
memo: https://amigo.geneontology.org/amigo/term/GO:0005798
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0005798_Golgi-associated_vesicle


id: GOCC:0005802
description: trans-Golgi network
memo: https://amigo.geneontology.org/amigo/term/GO:0005802
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0005802_trans-Golgi_network


id: GOCC:0005815
description: Microtubule organizing center
memo: https://amigo.geneontology.org/amigo/term/GO:0005815
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0005815_Microtubule_organizing_center


id: GOCC:0005835
description: Fatty acid synthase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005835
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0005835_Fatty_acid_synthase_complex


id: GOCC:0005847
description: mRNA cleavage and polyadenylation specificity factor complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005847
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0005847_mRNA_cleavage_and_polyadenylation_specificity_factor_complex


id: GOCC:0005849
description: mRNA cleavage factor complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005849
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0005849_mRNA_cleavage_factor_complex


id: GOCC:0005882
description: Intermediate filament
memo: https://amigo.geneontology.org/amigo/term/GO:0005882
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0005882_Intermediate_filament


id: GOCC:0005887
description: Integral component of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0005887
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0005887_Integral_component_of_plasma_membrane


id: GOCC:0005911
description: Cell-cell junction
memo: https://amigo.geneontology.org/amigo/term/GO:0005911
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0005911_Cell-cell_junction


id: GOCC:0005945
description: 6-phosphofructokinase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005945
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0005945_6-phosphofructokinase_complex


id: GOCC:0005948
description: Acetolactate synthase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005948
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0005948_Acetolactate_synthase_complex


id: GOCC:0005951
description: Carbamoyl-phosphate synthase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005951
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0005951_Carbamoyl-phosphate_synthase_complex


id: GOCC:0005956
description: Protein kinase CK2 complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005956
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0005956_Protein_kinase_CK2_complex


id: GOCC:0005960
description: Glycine cleavage complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005960
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0005960_Glycine_cleavage_complex


id: GOCC:0005967
description: Mitochondrial pyruvate dehydrogenase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005967
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0005967_Mitochondrial_pyruvate_dehydrogenase_complex


id: GOCC:0005971
description: Ribonucleoside-diphosphate reductase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005971
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0005971_Ribonucleoside-diphosphate_reductase_complex


id: GOCC:0008076
description: Voltage-gated potassium channel complex
memo: https://amigo.geneontology.org/amigo/term/GO:0008076
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0008076_Voltage-gated_potassium_channel_complex


id: GOCC:0008537
description: Proteasome activator complex
memo: https://amigo.geneontology.org/amigo/term/GO:0008537
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0008537_Proteasome_activator_complex


id: GOCC:0009279
description: Cell outer membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0009279
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0009279_Cell_outer_membrane


id: GOCC:0009288
description: Bacterial-type flagellum
memo: https://amigo.geneontology.org/amigo/term/GO:0009288
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0009288_Bacterial-type_flagellum


id: GOCC:0009316
description: 3-isopropylmalate dehydratase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009316
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0009316_3-isopropylmalate_dehydratase_complex


id: GOCC:0009317
description: acetyl-CoA carboxylase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009317
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0009317_acetyl-CoA_carboxylase_complex


id: GOCC:0009318
description: Exodeoxyribonuclease VII complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009318
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0009318_Exodeoxyribonuclease_VII_complex


id: GOCC:0009328
description: phenylalanine-tRNA ligase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009328
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0009328_phenylalanine-tRNA_ligase_complex


id: GOCC:0009331
description: glycerol-3-phosphate dehydrogenase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009331
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0009331_glycerol-3-phosphate_dehydrogenase_complex


id: GOCC:0009338
description: Exodeoxyribonuclease V complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009338
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0009338_Exodeoxyribonuclease_V_complex


id: GOCC:0009341
description: Beta-galactosidase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009341
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0009341_Beta-galactosidase_complex


id: GOCC:0009347
description: Aspartate carbamoyltransferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009347
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0009347_Aspartate_carbamoyltransferase_complex


id: GOCC:0009349
description: Riboflavin synthase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009349
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0009349_Riboflavin_synthase_complex


id: GOCC:0009358
description: Polyphosphate kinase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009358
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0009358_Polyphosphate_kinase_complex


id: GOCC:0009360
description: DNA polymerase III complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009360
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0009360_DNA_polymerase_III_complex


id: GOCC:0009361
description: succinate-CoA ligase complex (ADP-forming)
memo: https://amigo.geneontology.org/amigo/term/GO:0009361
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0009361_succinate-CoA_ligase_complex_(ADP-forming)


id: GOCC:0009366
description: Enterobactin synthetase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009366
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0009366_Enterobactin_synthetase_complex


id: GOCC:0009368
description: Endopeptidase Clp complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009368
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0009368_Endopeptidase_Clp_complex


id: GOCC:0009376
description: HslUV protease complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009376
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0009376_HslUV_protease_complex


id: GOCC:0009379
description: Holliday junction helicase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009379
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0009379_Holliday_junction_helicase_complex


id: GOCC:0009380
description: Excinuclease repair complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009380
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0009380_Excinuclease_repair_complex


id: GOCC:0009425
description: Bacterial-type flagellum basal body
memo: https://amigo.geneontology.org/amigo/term/GO:0009425
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0009425_Bacterial-type_flagellum_basal_body


id: GOCC:0009534
description: Chloroplast thylakoid
memo: https://amigo.geneontology.org/amigo/term/GO:0009534
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0009534_Chloroplast_thylakoid


id: GOCC:0009535
description: Chloroplast thylakoid membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0009535
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0009535_Chloroplast_thylakoid_membrane


id: GOCC:0009543
description: Chloroplast thylakoid lumen
memo: https://amigo.geneontology.org/amigo/term/GO:0009543
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0009543_Chloroplast_thylakoid_lumen


id: GOCC:0009570
description: Chloroplast stroma
memo: https://amigo.geneontology.org/amigo/term/GO:0009570
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0009570_Chloroplast_stroma


id: GOCC:0009654
description: Photosystem II oxygen evolving complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009654
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0009654_Photosystem_II_oxygen_evolving_complex


id: GOCC:0009897
description: External side of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0009897
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0009897_External_side_of_plasma_membrane


id: GOCC:0009898
description: Cytoplasmic side of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0009898
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0009898_Cytoplasmic_side_of_plasma_membrane


id: GOCC:0009941
description: Chloroplast envelope
memo: https://amigo.geneontology.org/amigo/term/GO:0009941
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0009941_Chloroplast_envelope


id: GOCC:0010008
description: Endosome membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0010008
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0010008_Endosome_membrane


id: GOCC:0010009
description: Cytoplasmic side of endosome membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0010009
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0010009_Cytoplasmic_side_of_endosome_membrane


id: GOCC:0010170
description: glucose-1-phosphate adenylyltransferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0010170
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0010170_glucose-1-phosphate_adenylyltransferase_complex


id: GOCC:0012505
description: Endomembrane system
memo: https://amigo.geneontology.org/amigo/term/GO:0012505
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0012505_Endomembrane_system


id: GOCC:0012507
description: ER to Golgi transport vesicle membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0012507
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0012507_ER_to_Golgi_transport_vesicle_membrane


id: GOCC:0014069
description: Postsynaptic density
memo: https://amigo.geneontology.org/amigo/term/GO:0014069
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0014069_Postsynaptic_density


id: GOCC:0015627
description: Type II protein secretion system complex
memo: https://amigo.geneontology.org/amigo/term/GO:0015627
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0015627_Type_II_protein_secretion_system_complex


id: GOCC:0015629
description: Actin cytoskeleton
memo: https://amigo.geneontology.org/amigo/term/GO:0015629
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0015629_Actin_cytoskeleton


id: GOCC:0015630
description: Microtubule cytoskeleton
memo: https://amigo.geneontology.org/amigo/term/GO:0015630
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0015630_Microtubule_cytoskeleton


id: GOCC:0015934
description: Large ribosomal subunit
memo: https://amigo.geneontology.org/amigo/term/GO:0015934
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0015934_Large_ribosomal_subunit


id: GOCC:0015935
description: Small ribosomal subunit
memo: https://amigo.geneontology.org/amigo/term/GO:0015935
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0015935_Small_ribosomal_subunit


id: GOCC:0016021
description: Integral component of membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0016021
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0016021_Integral_component_of_membrane


id: GOCC:0016324
description: Apical plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0016324
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0016324_Apical_plasma_membrane


id: GOCC:0016465
description: Chaperonin ATPase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0016465
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0016465_Chaperonin_ATPase_complex


id: GOCC:0016469
description: Proton-transporting two-sector ATPase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0016469
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0016469_Proton-transporting_two-sector_ATPase_complex


id: GOCC:0016507
description: Mitochondrial fatty acid beta-oxidation multienzyme complex
memo: https://amigo.geneontology.org/amigo/term/GO:0016507
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0016507_Mitochondrial_fatty_acid_beta-oxidation_multienzyme_complex


id: GOCC:0016529
description: Sarcoplasmic reticulum
memo: https://amigo.geneontology.org/amigo/term/GO:0016529
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0016529_Sarcoplasmic_reticulum


id: GOCC:0016533
description: Protein kinase 5 complex
memo: https://amigo.geneontology.org/amigo/term/GO:0016533
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0016533_Protein_kinase_5_complex


id: GOCC:0017101
description: aminoacyl-tRNA synthetase multienzyme complex
memo: https://amigo.geneontology.org/amigo/term/GO:0017101
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0017101_aminoacyl-tRNA_synthetase_multienzyme_complex


id: GOCC:0017117
description: Single-stranded DNA-dependent ATP-dependent DNA helicase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0017117
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0017117_Single-stranded_DNA-dependent_ATP-dependent_DNA_helicase_complex


id: GOCC:0018995
description: Host cellular component
memo: https://amigo.geneontology.org/amigo/term/GO:0018995
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0018995_Host_cellular_component


id: GOCC:0019008
description: Molybdopterin synthase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0019008
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0019008_Molybdopterin_synthase_complex


id: GOCC:0019812
description: Type I site-specific deoxyribonuclease complex
memo: https://amigo.geneontology.org/amigo/term/GO:0019812
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0019812_Type_I_site-specific_deoxyribonuclease_complex


id: GOCC:0019866
description: Organelle inner membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0019866
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0019866_Organelle_inner_membrane


id: GOCC:0019897
description: Extrinsic component of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0019897
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0019897_Extrinsic_component_of_plasma_membrane


id: GOCC:0019898
description: Extrinsic component of membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0019898
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0019898_Extrinsic_component_of_membrane


id: GOCC:0022624
description: Proteasome accessory complex
memo: https://amigo.geneontology.org/amigo/term/GO:0022624
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0022624_Proteasome_accessory_complex


id: GOCC:0022625
description: Cytosolic large ribosomal subunit
memo: https://amigo.geneontology.org/amigo/term/GO:0022625
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0022625_Cytosolic_large_ribosomal_subunit


id: GOCC:0022626
description: Cytosolic ribosome
memo: https://amigo.geneontology.org/amigo/term/GO:0022626
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0022626_Cytosolic_ribosome


id: GOCC:0022627
description: Cytosolic small ribosomal subunit
memo: https://amigo.geneontology.org/amigo/term/GO:0022627
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0022627_Cytosolic_small_ribosomal_subunit


id: GOCC:0030075
description: Bacterial thylakoid
memo: https://amigo.geneontology.org/amigo/term/GO:0030075
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0030075_Bacterial_thylakoid


id: GOCC:0030076
description: Light-harvesting complex
memo: https://amigo.geneontology.org/amigo/term/GO:0030076
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0030076_Light-harvesting_complex


id: GOCC:0030077
description: Plasma membrane light-harvesting complex
memo: https://amigo.geneontology.org/amigo/term/GO:0030077
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0030077_Plasma_membrane_light-harvesting_complex


id: GOCC:0030127
description: COPII vesicle coat
memo: https://amigo.geneontology.org/amigo/term/GO:0030127
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1336802_STRINGid_GOCC:0030127_COPII_vesicle_coat


