# geneInfo

ensembl_gene_id: N007_00005
symbol: lysS
gene_biotype: protein_coding
description:
  lysyl-tRNA synthetase; Class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the class-II aminoacyl-tRNA synthetase family.


ensembl_gene_id: N007_00010
symbol: greA
gene_biotype: protein_coding
description:
  Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.


ensembl_gene_id: N007_00015
symbol: EPZ53170.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_00025
symbol: EPZ53172.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives.


ensembl_gene_id: N007_00030
symbol: hslO
gene_biotype: protein_coding
description:
  Hypothetical protein; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress.


ensembl_gene_id: N007_00035
symbol: coaX
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.


ensembl_gene_id: N007_00045
symbol: ftsH
gene_biotype: protein_coding
description:
  Cell division protein FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family.  In the central section; belongs to the AAA ATPase family.


ensembl_gene_id: N007_00050
symbol: EPZ53177.1
gene_biotype: protein_coding
description:
  Hypoxanthine phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the purine/pyrimidine phosphoribosyltransferase family.


ensembl_gene_id: N007_00055
symbol: tilS
gene_biotype: protein_coding
description:
  Hypothetical protein; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.


ensembl_gene_id: N007_00080
symbol: EPZ53166.1
gene_biotype: protein_coding
description:
  Cell division protein DedD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: N007_00120
symbol: EPZ53167.1
gene_biotype: protein_coding
description:
  Transcriptional regulator; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.


ensembl_gene_id: N007_00135
symbol: EPZ53192.1
gene_biotype: protein_coding
description:
  Stage V sporulation protein T; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_00140
symbol: mfd
gene_biotype: protein_coding
description:
  Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.


ensembl_gene_id: N007_00150
symbol: pth
gene_biotype: protein_coding
description:
  Hypothetical protein; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.


ensembl_gene_id: N007_00155
symbol: prs
gene_biotype: protein_coding
description:
  Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.


ensembl_gene_id: N007_00160
symbol: glmU
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain.


ensembl_gene_id: N007_00170
symbol: EPZ53199.1
gene_biotype: protein_coding
description:
  Endoribonuclease L-PSP; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_00180
symbol: ispE
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.


ensembl_gene_id: N007_00190
symbol: EPZ53203.1
gene_biotype: protein_coding
description:
  Cyanophycinase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the peptidase S51 family.


ensembl_gene_id: N007_00220
symbol: rsmA
gene_biotype: protein_coding
description:
  Hypothetical protein; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.


ensembl_gene_id: N007_00225
symbol: rnmV
gene_biotype: protein_coding
description:
  Hypothetical protein; Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step.


ensembl_gene_id: N007_00235
symbol: metG
gene_biotype: protein_coding
description:
  methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: N007_00240
symbol: EPZ53213.1
gene_biotype: protein_coding
description:
  AbrB family transcriptional regulator; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_00245
symbol: rsmI
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.


ensembl_gene_id: N007_00250
symbol: EPZ53215.1
gene_biotype: protein_coding
description:
  DNA replication initiation control protein YabA; Involved in initiation control of chromosome replication. Belongs to the YabA family.


ensembl_gene_id: N007_00270
symbol: tmk
gene_biotype: protein_coding
description:
  Hypothetical protein; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.


ensembl_gene_id: N007_00305
symbol: recR
gene_biotype: protein_coding
description:
  Recombinase RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.


ensembl_gene_id: N007_00310
symbol: EPZ53227.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.


ensembl_gene_id: N007_00315
symbol: dnaX
gene_biotype: protein_coding
description:
  Hypothetical protein; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: N007_00330
symbol: tadA
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: N007_00345
symbol: EPZ53233.1
gene_biotype: protein_coding
description:
  Asparagine synthase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_00350
symbol: mtnB
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the dehydration of methylthioribulose-1-phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P). Belongs to the aldolase class II family. MtnB subfamily.


ensembl_gene_id: N007_00360
symbol: EPZ53236.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the RuBisCO large chain family.


ensembl_gene_id: N007_00365
symbol: mtnD
gene_biotype: protein_coding
description:
  Acireductone dioxygenase; Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway.


ensembl_gene_id: N007_00455
symbol: EPZ48222.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ABC transporter superfamily.


ensembl_gene_id: N007_00475
symbol: EPZ48226.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the Nudix hydrolase family.


ensembl_gene_id: N007_00485
symbol: EPZ48228.1
gene_biotype: protein_coding
description:
  Peptidase M28; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_00510
symbol: EPZ48233.1
gene_biotype: protein_coding
description:
  Heme biosynthesis protein HemY; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the HesB/IscA family.


ensembl_gene_id: N007_00520
symbol: EPZ48235.1
gene_biotype: protein_coding
description:
  Arginine decarboxylase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_00540
symbol: EPZ48239.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the NAD(P)-dependent epimerase/dehydratase family.


ensembl_gene_id: N007_00545
symbol: galK
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.


ensembl_gene_id: N007_00560
symbol: EPZ48243.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.


ensembl_gene_id: N007_00575
symbol: EPZ48246.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the SEDS family.


ensembl_gene_id: N007_00610
symbol: EPZ48253.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family.


ensembl_gene_id: N007_00615
symbol: EPZ48254.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ArsC family.


ensembl_gene_id: N007_00670
symbol: thrB
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily.


ensembl_gene_id: N007_00675
symbol: EPZ48266.1
gene_biotype: protein_coding
description:
  Threonine synthase; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine.


ensembl_gene_id: N007_00700
symbol: EPZ48271.1
gene_biotype: protein_coding
description:
  4Fe-4S ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.


ensembl_gene_id: N007_00715
symbol: nfo
gene_biotype: protein_coding
description:
  Endonuclease IV; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin.


ensembl_gene_id: N007_00735
symbol: EPZ48278.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the thiolase-like superfamily. Thiolase family.


ensembl_gene_id: N007_00790
symbol: EPZ48289.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: N007_00830
symbol: EPZ48297.1
gene_biotype: protein_coding
description:
  Osmotically inducible protein C; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_00870
symbol: EPZ48305.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the cytochrome P450 family.


ensembl_gene_id: N007_00890
symbol: EPZ48309.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the HesB/IscA family.


ensembl_gene_id: N007_00905
symbol: EPZ46045.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the peptidase S26 family.


ensembl_gene_id: N007_00910
symbol: pxpA
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.


ensembl_gene_id: N007_00925
symbol: EPZ46049.1
gene_biotype: protein_coding
description:
  Dioxygenase; Converts D-mannonate to D-mannuronate; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: N007_00945
symbol: EPZ46053.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.


ensembl_gene_id: N007_00965
symbol: EPZ46057.1
gene_biotype: protein_coding
description:
  Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_00995
symbol: EPZ46063.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the P-Pant transferase superfamily.


ensembl_gene_id: N007_01000
symbol: EPZ46064.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ATP-dependent AMP-binding enzyme family.


ensembl_gene_id: N007_01060
symbol: mraZ
gene_biotype: protein_coding
description:
  Cell division protein MraZ; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the MraZ family.


ensembl_gene_id: N007_01065
symbol: rsmH
gene_biotype: protein_coding
description:
  Hypothetical protein; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.


ensembl_gene_id: N007_01080
symbol: EPZ43903.1
gene_biotype: protein_coding
description:
  Stage V sporulation protein D; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_01085
symbol: murE
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily.


ensembl_gene_id: N007_01090
symbol: mraY
gene_biotype: protein_coding
description:
  phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.


ensembl_gene_id: N007_01095
symbol: murD
gene_biotype: protein_coding
description:
  Hypothetical protein; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.


ensembl_gene_id: N007_01100
symbol: EPZ43907.1
gene_biotype: protein_coding
description:
  Stage V sporulation protein E; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the SEDS family.


ensembl_gene_id: N007_01105
symbol: murG
gene_biotype: protein_coding
description:
  Hypothetical protein; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.


ensembl_gene_id: N007_01120
symbol: menC
gene_biotype: protein_coding
description:
  Hypothetical protein; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB).


ensembl_gene_id: N007_01130
symbol: EPZ42970.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.


ensembl_gene_id: N007_01150
symbol: uvrB
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate  [...]


ensembl_gene_id: N007_01155
symbol: uvrA
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.


ensembl_gene_id: N007_01160
symbol: hprK
gene_biotype: protein_coding
description:
  HPr kinase; Catalyzes the ATP- as well as the pyrophosphate-dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK/P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P-Ser-HPr). The two antagonistic activities of HprK/P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (gluc [...]


ensembl_gene_id: N007_01190
symbol: EPZ42982.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family.


ensembl_gene_id: N007_01225
symbol: EPZ42989.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the BI1 family.


ensembl_gene_id: N007_01230
symbol: leuS
gene_biotype: protein_coding
description:
  leucyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: N007_01265
symbol: EPZ42997.1
gene_biotype: protein_coding
description:
  ATP-dependent helicase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_01275
symbol: EPZ42999.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the UPF0637 family.


ensembl_gene_id: N007_01280
symbol: EPZ43000.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the 5'-nucleotidase family.


ensembl_gene_id: N007_01285
symbol: nth
gene_biotype: protein_coding
description:
  Hypothetical protein; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.


ensembl_gene_id: N007_01330
symbol: EPZ43009.1
gene_biotype: protein_coding
description:
  Isocitrate dehydrogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_01345
symbol: EPZ43012.1
gene_biotype: protein_coding
description:
  rRNA methyltransferase; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.


ensembl_gene_id: N007_01355
symbol: EPZ43014.1
gene_biotype: protein_coding
description:
  Dihydrolipoamide dehydrogenase; E3 component of pyruvate complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_01360
symbol: EPZ43015.1
gene_biotype: protein_coding
description:
  Dienelactone hydrolase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_01365
symbol: EPZ43016.1
gene_biotype: protein_coding
description:
  2-oxoisovalerate dehydrogenase subunit beta; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_01370
symbol: pdhA
gene_biotype: protein_coding
description:
  Pyruvate dehydrogenase E1 subunit alpha; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3).


ensembl_gene_id: N007_01390
symbol: EPZ43021.1
gene_biotype: protein_coding
description:
  Serine protein kinase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_01420
symbol: EPZ43027.1
gene_biotype: protein_coding
description:
  Stress response protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the UPF0229 family.


ensembl_gene_id: N007_01425
symbol: EPZ43028.1
gene_biotype: protein_coding
description:
  Stage V sporulation protein R; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_01450
symbol: EPZ43033.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the purine-cytosine permease (2.A.39) family.


ensembl_gene_id: N007_01470
symbol: aroA
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.


ensembl_gene_id: N007_01475
symbol: rnz
gene_biotype: protein_coding
description:
  Hypothetical protein; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family.


ensembl_gene_id: N007_01505
symbol: EPZ43044.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the major facilitator superfamily.


ensembl_gene_id: N007_01525
symbol: EPZ43048.1
gene_biotype: protein_coding
description:
  Quinol oxidase subunit 1; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the heme-copper respiratory oxidase family.


ensembl_gene_id: N007_01530
symbol: EPZ43049.1
gene_biotype: protein_coding
description:
  Cytochrome O ubiquinol oxidase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_01535
symbol: EPZ43050.1
gene_biotype: protein_coding
description:
  Cytochrome aa3 quinol oxidase subunit IV; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_01545
symbol: EPZ43052.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the peptidase S11 family.


ensembl_gene_id: N007_01675
symbol: moaA
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.


ensembl_gene_id: N007_01690
symbol: EPZ42518.1
gene_biotype: protein_coding
description:
  MFS transporter; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_01705
symbol: EPZ42521.1
gene_biotype: protein_coding
description:
  6-phosphogluconate dehydrogenase; Similar to full-length Gnd, these proteins seems to have a truncated C-terminal 6PGD domainin; in Methylobacillus flagellatus this gene is essential for NAD+-dependent oxidation of 6-phosphogluconate; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_01720
symbol: dapH
gene_biotype: protein_coding
description:
  2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase; Catalyzes the transfer of an acetyl group from acetyl-CoA to tetrahydrodipicolinate.


ensembl_gene_id: N007_01725
symbol: EPZ42525.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate.


ensembl_gene_id: N007_01740
symbol: folD
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.


ensembl_gene_id: N007_01785
symbol: EPZ42537.1
gene_biotype: protein_coding
description:
  Nitrogen regulatory protein P-II; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the P(II) protein family.


ensembl_gene_id: N007_01870
symbol: EPZ42132.1
gene_biotype: protein_coding
description:
  Amino acid permease; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_01875
symbol: nagB
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion.


ensembl_gene_id: N007_01895
symbol: EPZ42137.1
gene_biotype: protein_coding
description:
  Betaine-aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: N007_01900
symbol: EPZ42138.1
gene_biotype: protein_coding
description:
  NADH-dependent flavin oxidoreductase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_01920
symbol: EPZ41269.1
gene_biotype: protein_coding
description:
  XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: N007_01935
symbol: EPZ41274.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the 'phage' integrase family.


ensembl_gene_id: N007_01945
symbol: EPZ53088.1
gene_biotype: protein_coding
description:
  Major facilitator transporter; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the major facilitator superfamily.


ensembl_gene_id: N007_01965
symbol: thrS
gene_biotype: protein_coding
description:
  threonyl-tRNA synthase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr).


ensembl_gene_id: N007_01970
symbol: infC
gene_biotype: protein_coding
description:
  Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.


ensembl_gene_id: N007_01975
symbol: rpmI
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the bacterial ribosomal protein bL35 family.


ensembl_gene_id: N007_01980
symbol: rplT
gene_biotype: protein_coding
description:
  50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.


ensembl_gene_id: N007_01985
symbol: EPZ53096.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: N007_02090
symbol: EPZ52914.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the IlvD/Edd family.


ensembl_gene_id: N007_02220
symbol: EPZ52940.1
gene_biotype: protein_coding
description:
  Glutamine amidotransferase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_02245
symbol: EPZ52945.1
gene_biotype: protein_coding
description:
  Sodium:solute symporter; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.


ensembl_gene_id: N007_02265
symbol: queA
gene_biotype: protein_coding
description:
  Hypothetical protein; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).


ensembl_gene_id: N007_02270
symbol: tgt
gene_biotype: protein_coding
description:
  Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form t [...]


ensembl_gene_id: N007_02305
symbol: secD
gene_biotype: protein_coding
description:
  Hypothetical protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: N007_02315
symbol: EPZ52781.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.


ensembl_gene_id: N007_02325
symbol: apt
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.


ensembl_gene_id: N007_02330
symbol: EPZ52784.1
gene_biotype: protein_coding
description:
  GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.


ensembl_gene_id: N007_02335
symbol: dtd
gene_biotype: protein_coding
description:
  Hypothetical protein; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family.


ensembl_gene_id: N007_02390
symbol: EPZ52795.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.


ensembl_gene_id: N007_02395
symbol: hemH
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.


ensembl_gene_id: N007_02400
symbol: hemE
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.


ensembl_gene_id: N007_02405
symbol: EPZ52798.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the UPF0403 family.


ensembl_gene_id: N007_02435
symbol: EPZ52804.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.


ensembl_gene_id: N007_02465
symbol: EPZ52770.1
gene_biotype: protein_coding
description:
  Resolvase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: N007_02490
symbol: EPZ52674.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the UPF0753 family.


ensembl_gene_id: N007_02505
symbol: EPZ52677.1
gene_biotype: protein_coding
description:
  Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_02550
symbol: EPZ52686.1
gene_biotype: protein_coding
description:
  Cation transporter; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_02555
symbol: EPZ52687.1
gene_biotype: protein_coding
description:
  HxlR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_02580
symbol: EPZ52692.1
gene_biotype: protein_coding
description:
  Alkaline phosphatase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_02590
symbol: EPZ52694.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.


ensembl_gene_id: N007_02620
symbol: pgi
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the GPI family.


ensembl_gene_id: N007_02625
symbol: EPZ52671.1
gene_biotype: protein_coding
description:
  Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.


ensembl_gene_id: N007_02630
symbol: EPZ52701.1
gene_biotype: protein_coding
description:
  Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: N007_02640
symbol: EPZ52703.1
gene_biotype: protein_coding
description:
  3-hexulose-6-phosphate synthase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_02725
symbol: EPZ52517.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the alpha-IPM synthase/homocitrate synthase family.


ensembl_gene_id: N007_02830
symbol: EPZ52538.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the pirin family.


ensembl_gene_id: N007_02845
symbol: murA
gene_biotype: protein_coding
description:
  Hypothetical protein; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.


ensembl_gene_id: N007_02870
symbol: ftsA
gene_biotype: protein_coding
description:
  Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.


ensembl_gene_id: N007_02875
symbol: ftsZ
gene_biotype: protein_coding
description:
  Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.


ensembl_gene_id: N007_02885
symbol: EPZ51518.1
gene_biotype: protein_coding
description:
  RNA polymerase sigma 70; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: N007_02895
symbol: EPZ51520.1
gene_biotype: protein_coding
description:
  YlmC/YmxH family sporulation protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_02900
symbol: EPZ51521.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the multicopper oxidase YfiH/RL5 family.


ensembl_gene_id: N007_02905
symbol: EPZ51522.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.


ensembl_gene_id: N007_02920
symbol: EPZ51525.1
gene_biotype: protein_coding
description:
  Septum formation initiator; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_02945
symbol: lspA
gene_biotype: protein_coding
description:
  Hypothetical protein; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.


ensembl_gene_id: N007_02950
symbol: EPZ51531.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: N007_02960
symbol: pyrR
gene_biotype: protein_coding
description:
  Hypothetical protein; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant; Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrR subfamily.


ensembl_gene_id: N007_02965
symbol: EPZ51534.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.


ensembl_gene_id: N007_02970
symbol: pyrC
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.


ensembl_gene_id: N007_02975
symbol: carA
gene_biotype: protein_coding
description:
  Carbamoyl phosphate synthase small subunit; Catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_02980
symbol: carB
gene_biotype: protein_coding
description:
  Carbamoyl phosphate synthase large subunit; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the CarB family.


ensembl_gene_id: N007_02985
symbol: pyrF
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily.


ensembl_gene_id: N007_02990
symbol: pyrE
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).


ensembl_gene_id: N007_03030
symbol: mntH
gene_biotype: protein_coding
description:
  Hypothetical protein; H(+)-stimulated, divalent metal cation uptake system. Belongs to the NRAMP family.


ensembl_gene_id: N007_03040
symbol: EPZ51549.1
gene_biotype: protein_coding
description:
  Glutamate dehydrogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.


ensembl_gene_id: N007_03065
symbol: rpoZ
gene_biotype: protein_coding
description:
  Hypothetical protein; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.


ensembl_gene_id: N007_03070
symbol: EPZ51555.1
gene_biotype: protein_coding
description:
  Peptidase ClpP; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.


ensembl_gene_id: N007_03075
symbol: priA
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.


ensembl_gene_id: N007_03080
symbol: def
gene_biotype: protein_coding
description:
  Hypothetical protein; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.


ensembl_gene_id: N007_03085
symbol: fmt
gene_biotype: protein_coding
description:
  Hypothetical protein; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.


ensembl_gene_id: N007_03095
symbol: rlmN
gene_biotype: protein_coding
description:
  23S rRNA methyltransferase; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family.


ensembl_gene_id: N007_03110
symbol: rsgA
gene_biotype: protein_coding
description:
  Hypothetical protein; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.


ensembl_gene_id: N007_03115
symbol: EPZ51563.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ribulose-phosphate 3-epimerase family.


ensembl_gene_id: N007_03120
symbol: spoVM
gene_biotype: protein_coding
description:
  Stage V sporulation protein M; Involved in the production of the spore cortex and coat; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_03125
symbol: rpmB
gene_biotype: protein_coding
description:
  50S ribosomal protein L28; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the bacterial ribosomal protein bL28 family.


ensembl_gene_id: N007_03135
symbol: recG
gene_biotype: protein_coding
description:
  Hypothetical protein; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.


ensembl_gene_id: N007_03140
symbol: EPZ51568.1
gene_biotype: protein_coding
description:
  Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_03150
symbol: metN
gene_biotype: protein_coding
description:
  Hypothetical protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.


ensembl_gene_id: N007_03155
symbol: EPZ51571.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the nlpA lipoprotein family.


ensembl_gene_id: N007_03160
symbol: psd
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).


ensembl_gene_id: N007_03165
symbol: EPZ51573.1
gene_biotype: protein_coding
description:
  NAD-dependent dehydratase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_03170
symbol: EPZ51574.1
gene_biotype: protein_coding
description:
  Glycosyl transferase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_03190
symbol: coaD
gene_biotype: protein_coding
description:
  Hypothetical protein; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.


ensembl_gene_id: N007_03205
symbol: EPZ51581.1
gene_biotype: protein_coding
description:
  Fatty acid biosynthesis transcriptional regulator; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_03210
symbol: plsX
gene_biotype: protein_coding
description:
  Phosphate acyltransferase; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.


ensembl_gene_id: N007_03220
symbol: EPZ51584.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: N007_03230
symbol: EPZ51586.1
gene_biotype: protein_coding
description:
  3-oxoacyl-ACP synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.


ensembl_gene_id: N007_03235
symbol: rnc
gene_biotype: protein_coding
description:
  Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.


ensembl_gene_id: N007_03240
symbol: smc
gene_biotype: protein_coding
description:
  Hypothetical protein; Required for chromosome condensation and partitioning. Belongs to the SMC family.


ensembl_gene_id: N007_03245
symbol: ftsY
gene_biotype: protein_coding
description:
  Cell division protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC).


ensembl_gene_id: N007_03250
symbol: EPZ51590.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a regulatory protein.


ensembl_gene_id: N007_03255
symbol: ffh
gene_biotype: protein_coding
description:
  Signal recognition particle protein Srp54; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily.


ensembl_gene_id: N007_03260
symbol: rpsP
gene_biotype: protein_coding
description:
  30S ribosomal protein S16; Binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the bacterial ribosomal protein bS16 family.


ensembl_gene_id: N007_03265
symbol: EPZ51593.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the UPF0109 family.


ensembl_gene_id: N007_03275
symbol: rimM
gene_biotype: protein_coding
description:
  Hypothetical protein; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.


ensembl_gene_id: N007_03280
symbol: trmD
gene_biotype: protein_coding
description:
  Hypothetical protein; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.


ensembl_gene_id: N007_03320
symbol: EPZ49179.1
gene_biotype: protein_coding
description:
  Transposase IS4; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_03360
symbol: EPZ48887.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in the degradation of specific anti-sigma factors. Belongs to the protease PrsW family.


ensembl_gene_id: N007_03390
symbol: EPZ48892.1
gene_biotype: protein_coding
description:
  PhoP family transcriptional regulator; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_03400
symbol: EPZ48894.1
gene_biotype: protein_coding
description:
  RNA pseudouridine synthase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the pseudouridine synthase RsuA family.


ensembl_gene_id: N007_03405
symbol: EPZ48895.1
gene_biotype: protein_coding
description:
  Spore maturation protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_03410
symbol: EPZ48896.1
gene_biotype: protein_coding
description:
  Nucleoside recognition protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_03425
symbol: scpB
gene_biotype: protein_coding
description:
  Hypothetical protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: N007_03430
symbol: scpA
gene_biotype: protein_coding
description:
  Hypothetical protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: N007_03455
symbol: EPZ48905.1
gene_biotype: protein_coding
description:
  Stage V sporulation protein AEB; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_03465
symbol: EPZ48907.1
gene_biotype: protein_coding
description:
  Stage V sporulation protein AC; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_03470
symbol: EPZ48908.1
gene_biotype: protein_coding
description:
  RNA polymerase sigma70; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: N007_03475
symbol: spoIIAB
gene_biotype: protein_coding
description:
  Serine/threonine protein kinase; Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition.


ensembl_gene_id: N007_03480
symbol: EPZ48910.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the anti-sigma-factor antagonist family.


ensembl_gene_id: N007_03495
symbol: deoB
gene_biotype: protein_coding
description:
  Hypothetical protein; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family.


ensembl_gene_id: N007_03500
symbol: xerD
gene_biotype: protein_coding
description:
  Hypothetical protein; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.


ensembl_gene_id: N007_03535
symbol: lipB
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate.


ensembl_gene_id: N007_03540
symbol: lipA
gene_biotype: protein_coding
description:
  Lipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.


ensembl_gene_id: N007_03545
symbol: EPZ48923.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.


ensembl_gene_id: N007_03550
symbol: moaC
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family.


ensembl_gene_id: N007_03610
symbol: EPZ48936.1
gene_biotype: protein_coding
description:
  Chemotaxis protein CheY; May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process.


ensembl_gene_id: N007_03625
symbol: nadK
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.


ensembl_gene_id: N007_03640
symbol: dxs
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.


ensembl_gene_id: N007_03650
symbol: EPZ48944.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the FPP/GGPP synthase family.


ensembl_gene_id: N007_03655
symbol: xseB
gene_biotype: protein_coding
description:
  Hypothetical protein; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.


ensembl_gene_id: N007_03660
symbol: xseA
gene_biotype: protein_coding
description:
  Hypothetical protein; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.


ensembl_gene_id: N007_03670
symbol: EPZ48948.1
gene_biotype: protein_coding
description:
  ferredoxin--NADP reductase; Catalyzes the oxidation of ferredoxin with NADP; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_03680
symbol: nusB
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.


ensembl_gene_id: N007_03700
symbol: EPZ48954.1
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase biotin carboxylase subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: N007_03705
symbol: EPZ48955.1
gene_biotype: protein_coding
description:
  Hypothetical protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: N007_03730
symbol: EPZ48960.1
gene_biotype: protein_coding
description:
  Stage III sporulation protein AD; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_03735
symbol: EPZ48961.1
gene_biotype: protein_coding
description:
  Stage III sporulation protein AC; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_03760
symbol: efp
gene_biotype: protein_coding
description:
  Elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.


ensembl_gene_id: N007_03765
symbol: aroQ
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.


ensembl_gene_id: N007_03770
symbol: EPZ48968.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the phosphoglycerate mutase family.


ensembl_gene_id: N007_03775
symbol: gcvPB
gene_biotype: protein_coding
description:
  Glycine dehydrogenase subunit 2; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. C-terminal subunit subfamily.


ensembl_gene_id: N007_03780
symbol: gcvPA
gene_biotype: protein_coding
description:
  Glycine dehydrogenase subunit 1; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein.


ensembl_gene_id: N007_03805
symbol: aroK
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.


ensembl_gene_id: N007_03850
symbol: obgE
gene_biotype: protein_coding
description:
  GTPase CgtA; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.


ensembl_gene_id: N007_03860
symbol: rpmA
gene_biotype: protein_coding
description:
  50S ribosomal protein L27; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the bacterial ribosomal protein bL27 family.


ensembl_gene_id: N007_03870
symbol: rplU
gene_biotype: protein_coding
description:
  50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.


ensembl_gene_id: N007_03885
symbol: EPZ48991.1
gene_biotype: protein_coding
description:
  Septum site-determining protein MinD; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_03890
symbol: minC
gene_biotype: protein_coding
description:
  Hypothetical protein; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family.


ensembl_gene_id: N007_03910
symbol: EPZ48996.1
gene_biotype: protein_coding
description:
  Rod shape-determining protein Mbl; Functions in MreBCD complex in some organisms; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_03915
symbol: EPZ48997.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the UPF0758 family.


ensembl_gene_id: N007_03955
symbol: EPZ49005.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the folylpolyglutamate synthase family.


ensembl_gene_id: N007_03960
symbol: valS
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.


ensembl_gene_id: N007_03985
symbol: EPZ49011.1
gene_biotype: protein_coding
description:
  Delta-aminolevulinic acid dehydratase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ALAD family.


ensembl_gene_id: N007_03990
symbol: EPZ49012.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.


ensembl_gene_id: N007_03995
symbol: hemC
gene_biotype: protein_coding
description:
  Hypothetical protein; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.


ensembl_gene_id: N007_04005
symbol: hemA
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).


ensembl_gene_id: N007_04010
symbol: engB
gene_biotype: protein_coding
description:
  Hypothetical protein; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.


ensembl_gene_id: N007_04015
symbol: lon
gene_biotype: protein_coding
description:
  Peptidase; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.


ensembl_gene_id: N007_04025
symbol: clpX
gene_biotype: protein_coding
description:
  ATP-dependent protease; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.


ensembl_gene_id: N007_04030
symbol: clpP
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: N007_04035
symbol: tig
gene_biotype: protein_coding
description:
  Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.


ensembl_gene_id: N007_04055
symbol: EPZ49023.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.


ensembl_gene_id: N007_04070
symbol: EPZ49026.1
gene_biotype: protein_coding
description:
  LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_04085
symbol: EPZ49029.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the UPF0176 family.


ensembl_gene_id: N007_04100
symbol: sdhB
gene_biotype: protein_coding
description:
  Part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_04105
symbol: sdhA
gene_biotype: protein_coding
description:
  Part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_04110
symbol: EPZ49034.1
gene_biotype: protein_coding
description:
  Succinate dehydrogenase cytochrome B558; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_04115
symbol: uvrC
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.


ensembl_gene_id: N007_04145
symbol: gltX
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu).


ensembl_gene_id: N007_04155
symbol: hisC
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.


ensembl_gene_id: N007_04240
symbol: rpiA
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.


ensembl_gene_id: N007_04250
symbol: EPZ49058.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol.


ensembl_gene_id: N007_04255
symbol: EPZ49059.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: N007_04310
symbol: ackA
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.


ensembl_gene_id: N007_04320
symbol: pfkA
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.


ensembl_gene_id: N007_04325
symbol: EPZ49073.1
gene_biotype: protein_coding
description:
  Zinc-binding dehydrogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_04375
symbol: EPZ49083.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: N007_04380
symbol: rocD
gene_biotype: protein_coding
description:
  Ornithine-oxoacid aminotransferase; Catalyzes the interconversion of ornithine to glutamate semialdehyde.


ensembl_gene_id: N007_04390
symbol: EPZ49086.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the arginase family.


ensembl_gene_id: N007_04405
symbol: EPZ48099.1
gene_biotype: protein_coding
description:
  enoyl-ACP reductase; Catalyzes a key regulatory step in fatty acid biosynthesis; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_04410
symbol: EPZ48100.1
gene_biotype: protein_coding
description:
  Beta-ketoacyl synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.


ensembl_gene_id: N007_04425
symbol: EPZ48103.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.


ensembl_gene_id: N007_04470
symbol: purU
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4).


ensembl_gene_id: N007_04495
symbol: EPZ48117.1
gene_biotype: protein_coding
description:
  Sulfite reductase; Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L-cysteine from sulfate. Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.


ensembl_gene_id: N007_04500
symbol: cysH
gene_biotype: protein_coding
description:
  Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.


ensembl_gene_id: N007_04530
symbol: EPZ48124.1
gene_biotype: protein_coding
description:
  Multidrug transporter; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_04635
symbol: fni
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).


ensembl_gene_id: N007_04660
symbol: EPZ48150.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in the non-oxidative decarboxylation and detoxification of phenolic derivatives. Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for phenolic acid decarboxylase.


ensembl_gene_id: N007_04665
symbol: EPZ48151.1
gene_biotype: protein_coding
description:
  Phenolic acid decarboxylase subunit C; Involved in the non-oxidative decarboxylation and detoxification of phenolic derivatives.


ensembl_gene_id: N007_04830
symbol: EPZ47865.1
gene_biotype: protein_coding
description:
  Single-stranded DNA-binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.


ensembl_gene_id: N007_04995
symbol: EPZ47606.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: N007_05190
symbol: EPZ47653.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the peptidase S14 family.


ensembl_gene_id: N007_05275
symbol: EPZ47607.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant.


ensembl_gene_id: N007_05300
symbol: EPZ47608.1
gene_biotype: protein_coding
description:
  Phage-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: N007_05330
symbol: EPZ47609.1
gene_biotype: protein_coding
description:
  DNA methylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: N007_05570
symbol: EPZ47611.1
gene_biotype: protein_coding
description:
  DNA N-6-adenine-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: N007_05610
symbol: EPZ47731.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the N(4)/N(6)-methyltransferase family.


ensembl_gene_id: N007_05625
symbol: EPZ47734.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen.


ensembl_gene_id: N007_05710
symbol: EPZ47612.1
gene_biotype: protein_coding
description:
  Hypothetical protein; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA.


ensembl_gene_id: N007_05800
symbol: EPZ47767.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.


ensembl_gene_id: N007_05830
symbol: dacB
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria.


ensembl_gene_id: N007_05865
symbol: coaE
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.


ensembl_gene_id: N007_05870
symbol: mutM
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates.


ensembl_gene_id: N007_05875
symbol: polA
gene_biotype: protein_coding
description:
  Hypothetical protein; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.


ensembl_gene_id: N007_05880
symbol: mdh
gene_biotype: protein_coding
description:
  Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.


ensembl_gene_id: N007_05885
symbol: EPZ47464.1
gene_biotype: protein_coding
description:
  Converts isocitrate to alpha ketoglutarate; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_05900
symbol: trpS
gene_biotype: protein_coding
description:
  tryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: N007_05905
symbol: EPZ47468.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the pyruvate kinase family.


ensembl_gene_id: N007_05910
symbol: accA
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.


ensembl_gene_id: N007_05915
symbol: accD
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase subunit beta; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.


ensembl_gene_id: N007_05960
symbol: EPZ47449.1
gene_biotype: protein_coding
description:
  Cysteine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cysteine synthase/cystathionine beta- synthase family.


ensembl_gene_id: N007_05970
symbol: dinB
gene_biotype: protein_coding
description:
  Hypothetical protein; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.


ensembl_gene_id: N007_05990
symbol: EPZ47484.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the UPF0173 family.


ensembl_gene_id: N007_05995
symbol: EPZ47485.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the UPF0342 family.


ensembl_gene_id: N007_06010
symbol: queC
gene_biotype: protein_coding
description:
  7-cyano-7-deazaguanine synthase; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)).


ensembl_gene_id: N007_06015
symbol: ileS
gene_biotype: protein_coding
description:
  isoleucyl-tRNA synthase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 2 subfamily.


ensembl_gene_id: N007_06040
symbol: ribH
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin; Belongs to the DMRL synthase family.


ensembl_gene_id: N007_06045
symbol: ribBA
gene_biotype: protein_coding
description:
  GTP cyclohydrolase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.


ensembl_gene_id: N007_06055
symbol: EPZ47497.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.


ensembl_gene_id: N007_06070
symbol: codY
gene_biotype: protein_coding
description:
  Transcriptional regulator; DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor; Belongs to the CodY family.


ensembl_gene_id: N007_06110
symbol: proS
gene_biotype: protein_coding
description:
  prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro).


ensembl_gene_id: N007_06140
symbol: tatA
gene_biotype: protein_coding
description:
  Hypothetical protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.


ensembl_gene_id: N007_06145
symbol: tatC
gene_biotype: protein_coding
description:
  Hypothetical protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes.


ensembl_gene_id: N007_06230
symbol: EPZ47405.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the production of nitric oxide. Belongs to the NOS family. Bacterial NOS oxygenase subfamily.


ensembl_gene_id: N007_06280
symbol: EPZ47388.1
gene_biotype: protein_coding
description:
  Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: N007_06400
symbol: EPZ47355.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.


ensembl_gene_id: N007_06525
symbol: cas12b
gene_biotype: protein_coding
description:
  Hypothetical protein; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans- encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein (By similarity). Th [...]


ensembl_gene_id: N007_06530
symbol: cas1
gene_biotype: protein_coding
description:
  Hypothetical protein; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.


ensembl_gene_id: N007_06535
symbol: cas2
gene_biotype: protein_coding
description:
  Hypothetical protein; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.


ensembl_gene_id: N007_06545
symbol: EPZ47381.1
gene_biotype: protein_coding
description:
  Iditol 2-dehydrogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_06570
symbol: tal
gene_biotype: protein_coding
description:
  Hypothetical protein; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily.


ensembl_gene_id: N007_06590
symbol: gyrA
gene_biotype: protein_coding
description:
  DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: N007_06595
symbol: gyrB
gene_biotype: protein_coding
description:
  DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: N007_06600
symbol: recF
gene_biotype: protein_coding
description:
  Hypothetical protein; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family.


ensembl_gene_id: N007_06610
symbol: EPZ46329.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of replication [...]


ensembl_gene_id: N007_06615
symbol: dnaA
gene_biotype: protein_coding
description:
  Chromosomal replication initiation protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.


ensembl_gene_id: N007_06625
symbol: rnpA
gene_biotype: protein_coding
description:
  Hypothetical protein; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.


ensembl_gene_id: N007_06640
symbol: mnmE
gene_biotype: protein_coding
description:
  Hypothetical protein; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.


ensembl_gene_id: N007_06645
symbol: mnmG
gene_biotype: protein_coding
description:
  tRNA uridine 5-carboxymethylaminomethyl modification protein; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.


ensembl_gene_id: N007_06650
symbol: rsmG
gene_biotype: protein_coding
description:
  Hypothetical protein; Specifically methylates the N7 position of guanine in position 535 of 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.


ensembl_gene_id: N007_06655
symbol: EPZ46338.1
gene_biotype: protein_coding
description:
  Chromosome partitioning protein ParB; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ParB family.


ensembl_gene_id: N007_06660
symbol: EPZ46339.1
gene_biotype: protein_coding
description:
  Sporulation initiation inhibitor Soj; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_06665
symbol: EPZ46340.1
gene_biotype: protein_coding
description:
  Plasmid partitioning protein ParB; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ParB family.


ensembl_gene_id: N007_06700
symbol: EPZ46347.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: N007_06710
symbol: ychF
gene_biotype: protein_coding
description:
  GTP-binding protein YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.


ensembl_gene_id: N007_06725
symbol: rpsR
gene_biotype: protein_coding
description:
  30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.


ensembl_gene_id: N007_06745
symbol: EPZ46322.1
gene_biotype: protein_coding
description:
  DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.


ensembl_gene_id: N007_06785
symbol: rlmH
gene_biotype: protein_coding
description:
  Hypothetical protein; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.


ensembl_gene_id: N007_06805
symbol: EPZ46198.1
gene_biotype: protein_coding
description:
  RNA helicase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the DEAD box helicase family.


ensembl_gene_id: N007_06810
symbol: cinA
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the CinA family.


ensembl_gene_id: N007_06815
symbol: EPZ46200.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: N007_06820
symbol: EPZ46201.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the UPF0234 family.


ensembl_gene_id: N007_06850
symbol: EPZ46207.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the FtsK/SpoIIIE/SftA family.


ensembl_gene_id: N007_06865
symbol: rnj
gene_biotype: protein_coding
description:
  Ribonuclease J; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay; Belongs to the metallo-beta-lactamase superfamily. RNA- metabolizing metallo-beta-lactamase-like family. Bacterial RNase J subfamily.


ensembl_gene_id: N007_06870
symbol: dapA
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).


ensembl_gene_id: N007_06875
symbol: EPZ46212.1
gene_biotype: protein_coding
description:
  Aspartate kinase; Catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; diaminopimelate sensitive; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the aspartokinase family.


ensembl_gene_id: N007_06880
symbol: asd
gene_biotype: protein_coding
description:
  Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.


ensembl_gene_id: N007_06885
symbol: spoVFB
gene_biotype: protein_coding
description:
  Dihydrofolate reductase; Involved in production of dipicolinic acid (pyridine-2,6-dicarboxylic acid, DPA) which is synthesized late in sporulation in the mother cell and accumulates in the spore; mutations in this gene result in a lack of DPA synthesis; presumably functions with SpoVFA to form the synthase enzyme; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_06890
symbol: EPZ46215.1
gene_biotype: protein_coding
description:
  Dihydrofolate reductase; Catalyzes the synthesis of dipicolinic acid from dihydroxydipicolinic acid; plays a role in spore heat resistance; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_06895
symbol: dut
gene_biotype: protein_coding
description:
  Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family.


ensembl_gene_id: N007_06900
symbol: EPZ46216.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the peptidase M16 family.


ensembl_gene_id: N007_06910
symbol: pnp
gene_biotype: protein_coding
description:
  Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.


ensembl_gene_id: N007_06915
symbol: rpsO
gene_biotype: protein_coding
description:
  30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.


ensembl_gene_id: N007_06920
symbol: EPZ46219.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ribF family.


ensembl_gene_id: N007_06925
symbol: truB
gene_biotype: protein_coding
description:
  Hypothetical protein; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.


ensembl_gene_id: N007_06935
symbol: rbfA
gene_biotype: protein_coding
description:
  Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.


ensembl_gene_id: N007_06940
symbol: infB
gene_biotype: protein_coding
description:
  Hypothetical protein; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.


ensembl_gene_id: N007_06955
symbol: nusA
gene_biotype: protein_coding
description:
  Transcription elongation factor NusA; Participates in both transcription termination and antitermination.


ensembl_gene_id: N007_06960
symbol: rimP
gene_biotype: protein_coding
description:
  Hypothetical protein; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.


ensembl_gene_id: N007_06965
symbol: EPZ46228.1
gene_biotype: protein_coding
description:
  GTP-binding protein TypA; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_06980
symbol: dxr
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family.


ensembl_gene_id: N007_06990
symbol: EPZ46233.1
gene_biotype: protein_coding
description:
  UDP pyrophosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.


ensembl_gene_id: N007_06995
symbol: frr
gene_biotype: protein_coding
description:
  Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.


ensembl_gene_id: N007_07005
symbol: tsf
gene_biotype: protein_coding
description:
  Elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.


ensembl_gene_id: N007_07010
symbol: rpsB
gene_biotype: protein_coding
description:
  30S ribosomal protein S2; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS2 family.


ensembl_gene_id: N007_07020
symbol: cheD
gene_biotype: protein_coding
description:
  Hypothetical protein; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.


ensembl_gene_id: N007_07055
symbol: flhA
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.


ensembl_gene_id: N007_07060
symbol: flhB
gene_biotype: protein_coding
description:
  Hypothetical protein; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family.


ensembl_gene_id: N007_07070
symbol: fliQ
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.


ensembl_gene_id: N007_07075
symbol: fliP
gene_biotype: protein_coding
description:
  Hypothetical protein; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.


ensembl_gene_id: N007_07085
symbol: EPZ46251.1
gene_biotype: protein_coding
description:
  Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_07100
symbol: EPZ46254.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.


ensembl_gene_id: N007_07150
symbol: EPZ46264.1
gene_biotype: protein_coding
description:
  Flagellar motor switch protein FliG; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_07155
symbol: EPZ46265.1
gene_biotype: protein_coding
description:
  Hypothetical protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family.


ensembl_gene_id: N007_07165
symbol: EPZ46267.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the flagella basal body rod proteins family.


ensembl_gene_id: N007_07170
symbol: EPZ46268.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.


ensembl_gene_id: N007_07175
symbol: hslU
gene_biotype: protein_coding
description:
  ATP-dependent protease; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis.


ensembl_gene_id: N007_07180
symbol: hslV
gene_biotype: protein_coding
description:
  ATP-dependent protease; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery.


ensembl_gene_id: N007_07190
symbol: gid
gene_biotype: protein_coding
description:
  tRNA (uracil-5-)-methyltransferase; Catalyzes the folate-dependent formation of 5-methyl-uridine at position 54 (M-5-U54) in all tRNAs; Belongs to the MnmG family. TrmFO subfamily.


ensembl_gene_id: N007_07195
symbol: topA
gene_biotype: protein_coding
description:
  DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]


ensembl_gene_id: N007_07255
symbol: sucD
gene_biotype: protein_coding
description:
  succinyl-CoA synthetase subsunit alpha; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.


ensembl_gene_id: N007_07260
symbol: sucC
gene_biotype: protein_coding
description:
  malate--CoA ligase subunit beta; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.


ensembl_gene_id: N007_07285
symbol: EPZ46291.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the small heat shock protein (HSP20) family.


ensembl_gene_id: N007_07345
symbol: EPZ46303.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the UPF0102 family.


ensembl_gene_id: N007_07365
symbol: EPZ46307.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.


ensembl_gene_id: N007_07370
symbol: rplS
gene_biotype: protein_coding
description:
  50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.


ensembl_gene_id: N007_07415
symbol: EPZ46317.1
gene_biotype: protein_coding
description:
  Tartrate dehydrogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_07430
symbol: EPZ46100.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the group II decarboxylase family.


ensembl_gene_id: N007_07445
symbol: EPZ46103.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: N007_07475
symbol: EPZ46109.1
gene_biotype: protein_coding
description:
  Guanidinobutyrase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the arginase family.


ensembl_gene_id: N007_07480
symbol: EPZ46110.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.


ensembl_gene_id: N007_07485
symbol: EPZ46111.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the AlaDH/PNT family.


ensembl_gene_id: N007_07510
symbol: EPZ46116.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: N007_07515
symbol: EPZ46117.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate.


ensembl_gene_id: N007_07535
symbol: EPZ46121.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the CoA-transferase III family.


ensembl_gene_id: N007_07570
symbol: EPZ46128.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the NadC/ModD family.


ensembl_gene_id: N007_07575
symbol: EPZ46129.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.


ensembl_gene_id: N007_07600
symbol: EPZ45890.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the CtsR family.


ensembl_gene_id: N007_07610
symbol: mcsB
gene_biotype: protein_coding
description:
  ATP:guanido phosphotransferase; Catalyzes the specific phosphorylation of arginine residues in proteins.


ensembl_gene_id: N007_07615
symbol: EPZ45893.1
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease ATP-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ClpA/ClpB family.


ensembl_gene_id: N007_07620
symbol: radA
gene_biotype: protein_coding
description:
  DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.


ensembl_gene_id: N007_07625
symbol: EPZ45895.1
gene_biotype: protein_coding
description:
  DNA integrity scanning protein DisA; Non-specific DNA-binding; scans chromosomes during sporulation for DNA-damage; delays initiation of sporulation; participates in a checkpoint signaling cascade for cell-cycle progression and DNA repair; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the DisA family.


ensembl_gene_id: N007_07645
symbol: ispF
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP).


ensembl_gene_id: N007_07650
symbol: gltX-2
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.


ensembl_gene_id: N007_07655
symbol: cysS
gene_biotype: protein_coding
description:
  cysteinyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: N007_07660
symbol: mrnC
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family.


ensembl_gene_id: N007_07675
symbol: EPZ45905.1
gene_biotype: protein_coding
description:
  DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the sigma-70 factor family.


ensembl_gene_id: N007_07680
symbol: rpmG
gene_biotype: protein_coding
description:
  50S ribosomal protein L33; In Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group have the CXXC motif; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_07685
symbol: secE
gene_biotype: protein_coding
description:
  Hypothetical protein; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.


ensembl_gene_id: N007_07690
symbol: nusG
gene_biotype: protein_coding
description:
  Transcription antitermination protein NusG; Participates in transcription elongation, termination and antitermination.


ensembl_gene_id: N007_07695
symbol: rplK
gene_biotype: protein_coding
description:
  50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.


ensembl_gene_id: N007_07700
symbol: rplA
gene_biotype: protein_coding
description:
  50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.


ensembl_gene_id: N007_07705
symbol: rplJ
gene_biotype: protein_coding
description:
  Hypothetical protein; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.


ensembl_gene_id: N007_07710
symbol: rplL
gene_biotype: protein_coding
description:
  50S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.


ensembl_gene_id: N007_07720
symbol: rpoB
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: N007_07735
symbol: rpsL
gene_biotype: protein_coding
description:
  30S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.


ensembl_gene_id: N007_07740
symbol: rpsG
gene_biotype: protein_coding
description:
  30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.


ensembl_gene_id: N007_07745
symbol: fusA
gene_biotype: protein_coding
description:
  Elongation factor P; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.


ensembl_gene_id: N007_07750
symbol: tuf
gene_biotype: protein_coding
description:
  Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.


ensembl_gene_id: N007_07755
symbol: rpsJ
gene_biotype: protein_coding
description:
  30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.


ensembl_gene_id: N007_07760
symbol: rplC
gene_biotype: protein_coding
description:
  50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.


ensembl_gene_id: N007_07770
symbol: rplW
gene_biotype: protein_coding
description:
  50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.


ensembl_gene_id: N007_07775
symbol: rplB
gene_biotype: protein_coding
description:
  50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.


ensembl_gene_id: N007_07780
symbol: rpsS
gene_biotype: protein_coding
description:
  30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.


ensembl_gene_id: N007_07785
symbol: rplV
gene_biotype: protein_coding
description:
  50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.


ensembl_gene_id: N007_07790
symbol: rpsC
gene_biotype: protein_coding
description:
  30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.


ensembl_gene_id: N007_07795
symbol: rplP
gene_biotype: protein_coding
description:
  50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.


ensembl_gene_id: N007_07800
symbol: rpmC
gene_biotype: protein_coding
description:
  50S ribosomal protein L29; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the universal ribosomal protein uL29 family.


ensembl_gene_id: N007_07805
symbol: rpsQ
gene_biotype: protein_coding
description:
  30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.


ensembl_gene_id: N007_07810
symbol: rplN
gene_biotype: protein_coding
description:
  50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.


ensembl_gene_id: N007_07815
symbol: rplX
gene_biotype: protein_coding
description:
  50S ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.


ensembl_gene_id: N007_07820
symbol: rplE
gene_biotype: protein_coding
description:
  50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.


ensembl_gene_id: N007_07825
symbol: rpsN
gene_biotype: protein_coding
description:
  30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.


ensembl_gene_id: N007_07830
symbol: rpsH
gene_biotype: protein_coding
description:
  30S ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.


ensembl_gene_id: N007_07835
symbol: rplF
gene_biotype: protein_coding
description:
  50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.


ensembl_gene_id: N007_07840
symbol: rplR
gene_biotype: protein_coding
description:
  50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.


ensembl_gene_id: N007_07845
symbol: rpsE
gene_biotype: protein_coding
description:
  30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.


ensembl_gene_id: N007_07850
symbol: rpmD
gene_biotype: protein_coding
description:
  50S ribosomal protein L30; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_07855
symbol: rplO
gene_biotype: protein_coding
description:
  50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.


ensembl_gene_id: N007_07860
symbol: secY
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.


ensembl_gene_id: N007_07865
symbol: adk
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.


ensembl_gene_id: N007_07875
symbol: infA
gene_biotype: protein_coding
description:
  Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.


ensembl_gene_id: N007_07880
symbol: rpmJ
gene_biotype: protein_coding
description:
  50S ribosomal protein L36; Smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_07885
symbol: rpsM
gene_biotype: protein_coding
description:
  30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.


ensembl_gene_id: N007_07890
symbol: rpsK
gene_biotype: protein_coding
description:
  30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.


ensembl_gene_id: N007_07895
symbol: rpsD
gene_biotype: protein_coding
description:
  30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.


ensembl_gene_id: N007_07900
symbol: rpoA
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: N007_07905
symbol: rplQ
gene_biotype: protein_coding
description:
  50S ribosomal protein L17; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_07910
symbol: truA
gene_biotype: protein_coding
description:
  Hypothetical protein; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.


ensembl_gene_id: N007_07915
symbol: rplM
gene_biotype: protein_coding
description:
  50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.


ensembl_gene_id: N007_07920
symbol: rpsI
gene_biotype: protein_coding
description:
  30S ribosomal protein S9; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS9 family.


ensembl_gene_id: N007_07935
symbol: EPZ45936.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.


ensembl_gene_id: N007_07965
symbol: dacA
gene_biotype: protein_coding
description:
  Membrane protein; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria.


ensembl_gene_id: N007_07975
symbol: glmM
gene_biotype: protein_coding
description:
  Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.


ensembl_gene_id: N007_07980
symbol: glmS
gene_biotype: protein_coding
description:
  Glutamine amidotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.


ensembl_gene_id: N007_08045
symbol: sbcD
gene_biotype: protein_coding
description:
  Hypothetical protein; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family.


ensembl_gene_id: N007_08090
symbol: ssuB
gene_biotype: protein_coding
description:
  Hypothetical protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.


ensembl_gene_id: N007_08100
symbol: ssuD
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the desulfonation of aliphatic sulfonates. Belongs to the SsuD family.


ensembl_gene_id: N007_08120
symbol: EPZ45732.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Sulfate/tungstate importer (TC 3.A.1.6) family.


ensembl_gene_id: N007_08130
symbol: EPZ45734.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import.


ensembl_gene_id: N007_08190
symbol: EPZ45746.1
gene_biotype: protein_coding
description:
  GlcNAc-PI de-N-acetylase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_08210
symbol: EPZ45750.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP).


ensembl_gene_id: N007_08265
symbol: EPZ45628.1
gene_biotype: protein_coding
description:
  TPP-dependent acetoin dehydrogenase complex, E1 protein subunit beta; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_08360
symbol: EPZ45646.1
gene_biotype: protein_coding
description:
  Oxidoreductase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_08365
symbol: EPZ45647.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA/RNA precursor pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions.


ensembl_gene_id: N007_08370
symbol: EPZ45648.1
gene_biotype: protein_coding
description:
  NRAMP family metal ion transporter; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_08375
symbol: EPZ45649.1
gene_biotype: protein_coding
description:
  tRNA-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_08415
symbol: murF
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.


ensembl_gene_id: N007_08435
symbol: asnC
gene_biotype: protein_coding
description:
  asparaginyl-tRNA synthase; Catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_08440
symbol: EPZ45662.1
gene_biotype: protein_coding
description:
  Microtubule-severing ATPase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the AAA ATPase family.


ensembl_gene_id: N007_08460
symbol: surE
gene_biotype: protein_coding
description:
  Hypothetical protein; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.


ensembl_gene_id: N007_08470
symbol: mtaD
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the deamination of 5-methylthioadenosine and S- adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine. Belongs to the metallo-dependent hydrolases superfamily. MTA/SAH deaminase family.


ensembl_gene_id: N007_08475
symbol: mtnA
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P).


ensembl_gene_id: N007_08480
symbol: EPZ45670.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Purine nucleoside phosphorylase which is highly specific for 6-oxopurine nucleosides. Cleaves guanosine or inosine to respective bases and sugar-1-phosphate molecules. Involved in purine salvage.


ensembl_gene_id: N007_08485
symbol: ku
gene_biotype: protein_coding
description:
  Hypothetical protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.


ensembl_gene_id: N007_08500
symbol: birA
gene_biotype: protein_coding
description:
  Hypothetical protein; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.


ensembl_gene_id: N007_08505
symbol: EPZ45675.1
gene_biotype: protein_coding
description:
  N-acetyl-alpha-D-glucosaminyl L-malate synthase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_08510
symbol: EPZ45676.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate.


ensembl_gene_id: N007_08520
symbol: EPZ45678.1
gene_biotype: protein_coding
description:
  Nucleotide pyrophosphohydrolase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_08530
symbol: uppP
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.


ensembl_gene_id: N007_08700
symbol: EPZ45513.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the enoyl-CoA hydratase/isomerase family.


ensembl_gene_id: N007_08705
symbol: rpoE
gene_biotype: protein_coding
description:
  Hypothetical protein; Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; Belongs to the RpoE family.


ensembl_gene_id: N007_08710
symbol: pyrG
gene_biotype: protein_coding
description:
  CTP synthetase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.


ensembl_gene_id: N007_08725
symbol: rho
gene_biotype: protein_coding
description:
  Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.


ensembl_gene_id: N007_08730
symbol: prfA
gene_biotype: protein_coding
description:
  Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.


ensembl_gene_id: N007_08745
symbol: EPZ45521.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.


ensembl_gene_id: N007_08775
symbol: EPZ45527.1
gene_biotype: protein_coding
description:
  Sugar transporter; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.


ensembl_gene_id: N007_08795
symbol: EPZ45531.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.


ensembl_gene_id: N007_08800
symbol: EPZ45532.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the UPF0340 family.


ensembl_gene_id: N007_08805
symbol: glyA
gene_biotype: protein_coding
description:
  Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.


ensembl_gene_id: N007_08815
symbol: upp
gene_biotype: protein_coding
description:
  Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.


ensembl_gene_id: N007_08825
symbol: EPZ45536.1
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 2-epimerase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.


ensembl_gene_id: N007_08840
symbol: atpB
gene_biotype: protein_coding
description:
  ATP synthase F0 subunit A; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.


ensembl_gene_id: N007_08845
symbol: atpE
gene_biotype: protein_coding
description:
  F0F1 ATP synthase subunit C; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: N007_08850
symbol: atpF
gene_biotype: protein_coding
description:
  ATP synthase F0 subunit B; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.


ensembl_gene_id: N007_08855
symbol: atpH
gene_biotype: protein_coding
description:
  Hypothetical protein; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: N007_08860
symbol: atpA
gene_biotype: protein_coding
description:
  F0F1 ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.


ensembl_gene_id: N007_08865
symbol: atpG
gene_biotype: protein_coding
description:
  F0F1 ATP synthase subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.


ensembl_gene_id: N007_08870
symbol: atpD
gene_biotype: protein_coding
description:
  F0F1 ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.


ensembl_gene_id: N007_08875
symbol: atpC
gene_biotype: protein_coding
description:
  ATP synthase F1 subunit epsilon; Produces ATP from ADP in the presence of a proton gradient across the membrane.


ensembl_gene_id: N007_08900
symbol: murA-2
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.


ensembl_gene_id: N007_08915
symbol: EPZ45554.1
gene_biotype: protein_coding
description:
  Stage III sporulation protein D; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_08920
symbol: EPZ45555.1
gene_biotype: protein_coding
description:
  Rod shape-determining protein MreB; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_08935
symbol: EPZ45558.1
gene_biotype: protein_coding
description:
  CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: N007_08940
symbol: fabZ
gene_biotype: protein_coding
description:
  3-hydroxyacyl-ACP dehydratase; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.


ensembl_gene_id: N007_08955
symbol: EPZ45562.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: N007_08990
symbol: EPZ45398.1
gene_biotype: protein_coding
description:
  succinyl-CoA:3-ketoacid-CoA transferase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_09020
symbol: iolA
gene_biotype: protein_coding
description:
  Methylmalonate-semialdehyde dehydrogenase; Catalyzes the oxidation of malonate semialdehyde (MSA) and methylmalonate semialdehyde (MMSA) into acetyl-CoA and propanoyl-CoA, respectively.


ensembl_gene_id: N007_09085
symbol: EPZ45417.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the glycerate kinase type-1 family.


ensembl_gene_id: N007_09090
symbol: EPZ45418.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the 3-oxoacid CoA-transferase family.


ensembl_gene_id: N007_09125
symbol: EPZ45234.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ClpA/ClpB family.


ensembl_gene_id: N007_09160
symbol: fhs
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the formate--tetrahydrofolate ligase family.


ensembl_gene_id: N007_09165
symbol: EPZ45242.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.


ensembl_gene_id: N007_09175
symbol: EPZ45244.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the Cob(I)alamin adenosyltransferase family.


ensembl_gene_id: N007_09180
symbol: cobQ
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.


ensembl_gene_id: N007_09200
symbol: smpB
gene_biotype: protein_coding
description:
  Single-stranded DNA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome t [...]


ensembl_gene_id: N007_09205
symbol: rnr
gene_biotype: protein_coding
description:
  Hypothetical protein; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.


ensembl_gene_id: N007_09210
symbol: EPZ45170.1
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.


ensembl_gene_id: N007_09215
symbol: eno
gene_biotype: protein_coding
description:
  Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.


ensembl_gene_id: N007_09225
symbol: tpiA
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.


ensembl_gene_id: N007_09230
symbol: pgk
gene_biotype: protein_coding
description:
  Phosphoglycerate kinase; Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the phosphoglycerate kinase family.


ensembl_gene_id: N007_09260
symbol: EPZ45180.1
gene_biotype: protein_coding
description:
  Fumarate hydratase; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.


ensembl_gene_id: N007_09265
symbol: lysA
gene_biotype: protein_coding
description:
  Hypothetical protein; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.


ensembl_gene_id: N007_09275
symbol: panD
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.


ensembl_gene_id: N007_09290
symbol: azoR
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family.


ensembl_gene_id: N007_09315
symbol: EPZ45191.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Releases the N-terminal proline from various substrates. Belongs to the peptidase S33 family.


ensembl_gene_id: N007_09325
symbol: panC
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.


ensembl_gene_id: N007_09330
symbol: panB
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family.


ensembl_gene_id: N007_09390
symbol: EPZ45206.1
gene_biotype: protein_coding
description:
  Aldo/keto reductase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_09425
symbol: EPZ45213.1
gene_biotype: protein_coding
description:
  Beta-lactamase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_09430
symbol: EPZ45214.1
gene_biotype: protein_coding
description:
  Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_09580
symbol: speH
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the prokaryotic AdoMetDC family. Type 1 subfamily.


ensembl_gene_id: N007_09600
symbol: htpX
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the peptidase M48B family.


ensembl_gene_id: N007_09615
symbol: EPZ45056.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: N007_09645
symbol: EPZ45062.1
gene_biotype: protein_coding
description:
  Citrate synthase; Catalyzes the formation of citrate from acetyl-CoA and oxaloacetate; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_09660
symbol: leuD
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily.


ensembl_gene_id: N007_09665
symbol: leuC
gene_biotype: protein_coding
description:
  Isopropylmalate isomerase; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.


ensembl_gene_id: N007_09670
symbol: leuB
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.


ensembl_gene_id: N007_09675
symbol: leuA
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily.


ensembl_gene_id: N007_09680
symbol: ilvC
gene_biotype: protein_coding
description:
  Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate.


ensembl_gene_id: N007_09690
symbol: EPZ45071.1
gene_biotype: protein_coding
description:
  Catalyzes the formation of 2-acetolactate from pyruvate; also known as acetolactate synthase large subunit; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_09695
symbol: ilvD
gene_biotype: protein_coding
description:
  Dihydroxy-acid dehydratase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the IlvD/Edd family.


ensembl_gene_id: N007_09700
symbol: ilvE
gene_biotype: protein_coding
description:
  Branched-chain amino acid aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: N007_09705
symbol: EPZ45074.1
gene_biotype: protein_coding
description:
  Homoserine dehydrogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_09725
symbol: hmp
gene_biotype: protein_coding
description:
  Hypothetical protein; Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress; Belongs to the globin family. Two-domain flavohemoproteins subfamily.


ensembl_gene_id: N007_09745
symbol: thiM
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family.


ensembl_gene_id: N007_09755
symbol: EPZ45084.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway; Belongs to the TenA family.


ensembl_gene_id: N007_09775
symbol: EPZ45088.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity.


ensembl_gene_id: N007_09865
symbol: EPZ45106.1
gene_biotype: protein_coding
description:
  Transcriptional regulator; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_09885
symbol: purA
gene_biotype: protein_coding
description:
  Hypothetical protein; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.


ensembl_gene_id: N007_09900
symbol: gapA
gene_biotype: protein_coding
description:
  Glyceraldehyde-3-phosphate dehydrogenase; Required for glycolysis; catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: N007_09965
symbol: msrB
gene_biotype: protein_coding
description:
  Methionine sulfoxide reductase B; This stereospecific enzymes reduces the R isomer of methionine sulfoxide while MsrA reduces the S form; provides protection against oxidative stress; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_10025
symbol: proA
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.


ensembl_gene_id: N007_10030
symbol: proB
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.


ensembl_gene_id: N007_10040
symbol: EPZ45141.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: N007_10060
symbol: rbsK
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.


ensembl_gene_id: N007_10135
symbol: EPZ44752.1
gene_biotype: protein_coding
description:
  PTS mannitol transporter subunit IIB; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_10145
symbol: EPZ44754.1
gene_biotype: protein_coding
description:
  PTS mannitol transporter subunit IIA; Phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_10155
symbol: EPZ44756.1
gene_biotype: protein_coding
description:
  Hypothetical protein; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr).


ensembl_gene_id: N007_10235
symbol: EPZ44608.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the peptidase M24B family.


ensembl_gene_id: N007_10250
symbol: EPZ44611.1
gene_biotype: protein_coding
description:
  Aspartate:proton symporter; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_10265
symbol: ispH
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.


ensembl_gene_id: N007_10270
symbol: EPZ44615.1
gene_biotype: protein_coding
description:
  Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family.


ensembl_gene_id: N007_10275
symbol: EPZ44616.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the inositol monophosphatase superfamily.


ensembl_gene_id: N007_10365
symbol: EPZ44633.1
gene_biotype: protein_coding
description:
  (2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_10370
symbol: EPZ44634.1
gene_biotype: protein_coding
description:
  Fe-S cluster assembly protein SufB; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_10375
symbol: EPZ44635.1
gene_biotype: protein_coding
description:
  Nitrogen-fixing protein NifU; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_10380
symbol: EPZ44636.1
gene_biotype: protein_coding
description:
  Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.


ensembl_gene_id: N007_10390
symbol: EPZ44638.1
gene_biotype: protein_coding
description:
  Iron ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_10395
symbol: EPZ44639.1
gene_biotype: protein_coding
description:
  Aromatic ring hydroxylating enzyme; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_10400
symbol: EPZ44640.1
gene_biotype: protein_coding
description:
  Alanine dehydrogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the AlaDH/PNT family.


ensembl_gene_id: N007_10420
symbol: pyrD
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.


ensembl_gene_id: N007_10430
symbol: EPZ44646.1
gene_biotype: protein_coding
description:
  Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.


ensembl_gene_id: N007_10440
symbol: folE
gene_biotype: protein_coding
description:
  GTP cyclohydrolase I; Involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: N007_10480
symbol: EPZ44602.1
gene_biotype: protein_coding
description:
  Serine recombinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: N007_10535
symbol: EPZ44665.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.


ensembl_gene_id: N007_10540
symbol: EPZ44666.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the UPF0761 family.


ensembl_gene_id: N007_10550
symbol: EPZ44668.1
gene_biotype: protein_coding
description:
  Nitrogen fixation protein NifU; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_10565
symbol: EPZ44671.1
gene_biotype: protein_coding
description:
  Helicase UvrD; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_10580
symbol: EPZ44674.1
gene_biotype: protein_coding
description:
  Hypothetical protein; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.


ensembl_gene_id: N007_10635
symbol: mnmA
gene_biotype: protein_coding
description:
  Thiouridylase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.


ensembl_gene_id: N007_10885
symbol: folE-2
gene_biotype: protein_coding
description:
  GTP cyclohydrolase I; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_11015
symbol: EPZ44487.1
gene_biotype: protein_coding
description:
  methionyl-tRNA formyltransferase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_11035
symbol: EPZ44491.1
gene_biotype: protein_coding
description:
  ArsR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_11055
symbol: EPZ44495.1
gene_biotype: protein_coding
description:
  PadR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_11060
symbol: EPZ44496.1
gene_biotype: protein_coding
description:
  Heat shock protein Hsp20; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the small heat shock protein (HSP20) family.


ensembl_gene_id: N007_11085
symbol: gpr
gene_biotype: protein_coding
description:
  Germination protein; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.


ensembl_gene_id: N007_11120
symbol: EPZ44323.1
gene_biotype: protein_coding
description:
  Peptidase U32; Involved in manganese homeostasis; activates the transcription of the mntABCD operon; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_11130
symbol: rsfS
gene_biotype: protein_coding
description:
  Iojap family protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.


ensembl_gene_id: N007_11140
symbol: nadD
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).


ensembl_gene_id: N007_11145
symbol: aroE
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).


ensembl_gene_id: N007_11195
symbol: EPZ44293.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the AAA ATPase family.


ensembl_gene_id: N007_11310
symbol: maiA
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes cis-trans isomerization of the C2-C3 double bond in maleate to yield fumarate.


ensembl_gene_id: N007_11375
symbol: EPZ44116.1
gene_biotype: protein_coding
description:
  Voltage-gated potassium channel; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_11475
symbol: EPZ44136.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). Belongs to the class-II aminoacyl-tRNA synthetase family. ProS type 1 subfamily.


ensembl_gene_id: N007_11585
symbol: EPZ44158.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: N007_11590
symbol: EPZ44159.1
gene_biotype: protein_coding
description:
  ABC transporter permease; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: N007_11595
symbol: EPZ44160.1
gene_biotype: protein_coding
description:
  Heme ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_11630
symbol: map
gene_biotype: protein_coding
description:
  Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.


ensembl_gene_id: N007_11640
symbol: acpS
gene_biotype: protein_coding
description:
  Hypothetical protein; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family.


ensembl_gene_id: N007_11645
symbol: nnrE
gene_biotype: protein_coding
description:
  Hypothetical protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration.  Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epi [...]


ensembl_gene_id: N007_11670
symbol: ahcY
gene_biotype: protein_coding
description:
  S-adenosyl-L-homocysteine hydrolase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.


ensembl_gene_id: N007_11740
symbol: thiL
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family.


ensembl_gene_id: N007_11760
symbol: tsaD
gene_biotype: protein_coding
description:
  Hypothetical protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.


ensembl_gene_id: N007_11775
symbol: EPZ44196.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.


ensembl_gene_id: N007_11785
symbol: EPZ44198.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.


ensembl_gene_id: N007_11795
symbol: groS
gene_biotype: protein_coding
description:
  Molecular chaperone GroES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.


ensembl_gene_id: N007_11800
symbol: groL
gene_biotype: protein_coding
description:
  Hypothetical protein; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.


ensembl_gene_id: N007_11815
symbol: EPZ44203.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the glycosyl hydrolase 57 family.


ensembl_gene_id: N007_11835
symbol: bshC
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in bacillithiol (BSH) biosynthesis. May catalyze the last step of the pathway, the addition of cysteine to glucosamine malate (GlcN-Mal) to generate BSH.


ensembl_gene_id: N007_11870
symbol: thiI
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS.


ensembl_gene_id: N007_11915
symbol: acsA
gene_biotype: protein_coding
description:
  acetyl-CoA synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family.


ensembl_gene_id: N007_12140
symbol: EPZ43796.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the SOS response-associated peptidase family.


ensembl_gene_id: N007_12280
symbol: EPZ43478.1
gene_biotype: protein_coding
description:
  Thioredoxin; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the thioredoxin family.


ensembl_gene_id: N007_12285
symbol: msrA
gene_biotype: protein_coding
description:
  Hypothetical protein; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.


ensembl_gene_id: N007_12320
symbol: EPZ43486.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the DEAD box helicase family.


ensembl_gene_id: N007_12325
symbol: EPZ43487.1
gene_biotype: protein_coding
description:
  NADPH dehydrogenase; Catalyzes the reduction of alpha, beta-unsaturated aldehydes and ketones; reduces the nitro group nitroester and nitroaromatic compounds; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_12345
symbol: EPZ43491.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the UPF0312 family.


ensembl_gene_id: N007_12355
symbol: EPZ43493.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the Fur family.


ensembl_gene_id: N007_12385
symbol: sat
gene_biotype: protein_coding
description:
  ATP sulfurylase; ATPS; converts ATP and sulfate to 5'phosphosulfate and pyrophosphate; in some organisms this enzyme is involved in the incorporation of inorganic sulfate while in others it is involved in the production of ATP in the reverse direction; the enzyme from Thermus thermophilus is dimeric and binds a zinc ion that is coordinated by cysteine and histidine residues that are not found in all related proteins but is found in some thermophilic organisms; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_12475
symbol: EPZ43517.1
gene_biotype: protein_coding
description:
  Iron permease; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_12485
symbol: gluQ
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5-dihydroxy-2- cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon; Belongs to the class-I aminoacyl-tRNA synthetase family. GluQ subfamily.


ensembl_gene_id: N007_12630
symbol: EPZ43548.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.


ensembl_gene_id: N007_12660
symbol: EPZ43554.1
gene_biotype: protein_coding
description:
  Thiol-disulfide isomerase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the thioredoxin family.


ensembl_gene_id: N007_12670
symbol: EPZ43556.1
gene_biotype: protein_coding
description:
  Thioredoxin reductase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_12690
symbol: EPZ43560.1
gene_biotype: protein_coding
description:
  Catalyzes the formation of cystathionine from L-cysteine and O-succinyl-L-homoserine; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_12695
symbol: EPZ43561.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.


ensembl_gene_id: N007_12720
symbol: EPZ43566.1
gene_biotype: protein_coding
description:
  NADH-dependent butanol dehydrogenase A; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_12730
symbol: EPZ43568.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the methyltransferase superfamily.


ensembl_gene_id: N007_12740
symbol: ctaB
gene_biotype: protein_coding
description:
  Hypothetical protein; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group; Belongs to the UbiA prenyltransferase family. Protoheme IX farnesyltransferase subfamily.


ensembl_gene_id: N007_12760
symbol: ispG
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family.


ensembl_gene_id: N007_12770
symbol: hisG
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Short subfamily.


ensembl_gene_id: N007_12775
symbol: hisD
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.


ensembl_gene_id: N007_12780
symbol: hisB
gene_biotype: protein_coding
description:
  Imidazoleglycerol-phosphate dehydratase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_12785
symbol: hisH
gene_biotype: protein_coding
description:
  Hypothetical protein; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.


ensembl_gene_id: N007_12795
symbol: hisF
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.


ensembl_gene_id: N007_12800
symbol: hisI
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; In the N-terminal section; belongs to the PRA-CH family.


ensembl_gene_id: N007_12835
symbol: glpX
gene_biotype: protein_coding
description:
  Type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_12855
symbol: EPZ43593.1
gene_biotype: protein_coding
description:
  Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.


ensembl_gene_id: N007_12860
symbol: EPZ43594.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the UPF0060 family.


ensembl_gene_id: N007_12895
symbol: leuD-2
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 2 subfamily.


ensembl_gene_id: N007_12915
symbol: EPZ43605.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the LeuD family.


ensembl_gene_id: N007_12975
symbol: azoR-2
gene_biotype: protein_coding
description:
  Azoreductase; Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family.


ensembl_gene_id: N007_13000
symbol: EPZ43334.1
gene_biotype: protein_coding
description:
  Ribonucleotide-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family.


ensembl_gene_id: N007_13005
symbol: EPZ43335.1
gene_biotype: protein_coding
description:
  Ribonucleotide-diphosphate reductase subunit alpha; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.


ensembl_gene_id: N007_13010
symbol: EPZ43339.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the NrdI family.


ensembl_gene_id: N007_13020
symbol: EPZ43341.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the WrbA family.


ensembl_gene_id: N007_13040
symbol: EPZ43345.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the arylamine N-acetyltransferase family.


ensembl_gene_id: N007_13105
symbol: zwf
gene_biotype: protein_coding
description:
  Glucose 6-phosphate dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.


ensembl_gene_id: N007_13110
symbol: prfB
gene_biotype: protein_coding
description:
  Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.


ensembl_gene_id: N007_13115
symbol: secA
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane.


ensembl_gene_id: N007_13130
symbol: hpf
gene_biotype: protein_coding
description:
  Hypothetical protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.


ensembl_gene_id: N007_13155
symbol: EPZ43365.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.


ensembl_gene_id: N007_13180
symbol: EPZ43370.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the sigma-70 factor family.


ensembl_gene_id: N007_13225
symbol: metK
gene_biotype: protein_coding
description:
  S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.


ensembl_gene_id: N007_13230
symbol: EPZ43380.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid.


ensembl_gene_id: N007_13295
symbol: EPZ43393.1
gene_biotype: protein_coding
description:
  GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_13305
symbol: EPZ43395.1
gene_biotype: protein_coding
description:
  Sugar:proton symporter; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.


ensembl_gene_id: N007_13310
symbol: sgbE
gene_biotype: protein_coding
description:
  L-ribulose-5-phosphate 4-epimerase; Catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_13330
symbol: EPZ43400.1
gene_biotype: protein_coding
description:
  Transposase IS116; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_13335
symbol: EPZ43401.1
gene_biotype: protein_coding
description:
  Arsenic transporter; Involved in arsenical resistance. Thought to form the channel of an arsenite pump; Belongs to the ArsB family.


ensembl_gene_id: N007_13355
symbol: EPZ43279.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the NiCoT transporter (TC 2.A.52) family.


ensembl_gene_id: N007_13365
symbol: EPZ43281.1
gene_biotype: protein_coding
description:
  Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_13460
symbol: cobS
gene_biotype: protein_coding
description:
  Hypothetical protein; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.


ensembl_gene_id: N007_13475
symbol: EPZ43303.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: N007_13485
symbol: cobT
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB).


ensembl_gene_id: N007_13500
symbol: queE
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds.


ensembl_gene_id: N007_13525
symbol: lgt
gene_biotype: protein_coding
description:
  Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.


ensembl_gene_id: N007_13550
symbol: metAA
gene_biotype: protein_coding
description:
  Homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family.


ensembl_gene_id: N007_13635
symbol: EPZ43272.1
gene_biotype: protein_coding
description:
  MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_13650
symbol: bioB
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.


ensembl_gene_id: N007_13655
symbol: EPZ43253.1
gene_biotype: protein_coding
description:
  NADP-dependent aryl-alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_13690
symbol: cobD
gene_biotype: protein_coding
description:
  Hypothetical protein; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.


ensembl_gene_id: N007_13715
symbol: EPZ43221.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily.


ensembl_gene_id: N007_13770
symbol: EPZ43120.1
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase PcrA; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_13775
symbol: ligA
gene_biotype: protein_coding
description:
  DNA ligase LigA; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA; Belongs to the NAD-dependent DNA ligase family. LigA subfamily.


ensembl_gene_id: N007_13790
symbol: gatC
gene_biotype: protein_coding
description:
  Hypothetical protein; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.


ensembl_gene_id: N007_13795
symbol: gatA
gene_biotype: protein_coding
description:
  glutamyl-tRNA(Gln) amidotransferase; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).


ensembl_gene_id: N007_13800
symbol: gatB
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily.


ensembl_gene_id: N007_13805
symbol: EPZ43127.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.


ensembl_gene_id: N007_13845
symbol: deoC
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.


ensembl_gene_id: N007_13940
symbol: EPZ42900.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the peptidase M20A family.


ensembl_gene_id: N007_13970
symbol: prfC
gene_biotype: protein_coding
description:
  Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.


ensembl_gene_id: N007_13990
symbol: EPZ42910.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the 4-oxalocrotonate tautomerase family.


ensembl_gene_id: N007_13995
symbol: EPZ42911.1
gene_biotype: protein_coding
description:
  4-oxalocrotonate decarboxylase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_14000
symbol: EPZ42912.1
gene_biotype: protein_coding
description:
  4-hyroxy-2-oxovalerate aldolase; Catalyzes the retro-aldol cleavage of 4-hydroxy-2- oxopentanoate to pyruvate and acetaldehyde. Is involved in the meta- cleavage pathway for the degradation of aromatic compounds. Belongs to the 4-hydroxy-2-oxovalerate aldolase family.


ensembl_gene_id: N007_14005
symbol: EPZ42913.1
gene_biotype: protein_coding
description:
  Acetaldehyde dehydrogenase; Catalyzes the conversion of acetaldehyde to acetyl-CoA, using NAD(+) and coenzyme A. Is the final enzyme in the meta-cleavage pathway for the degradation of aromatic compounds.


ensembl_gene_id: N007_14015
symbol: EPZ42915.1
gene_biotype: protein_coding
description:
  2-hydroxymuconic semialdehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: N007_14020
symbol: EPZ42916.1
gene_biotype: protein_coding
description:
  Extradiol ring-cleavage dioxygenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_14045
symbol: EPZ42921.1
gene_biotype: protein_coding
description:
  Dehydratase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the IlvD/Edd family.


ensembl_gene_id: N007_14060
symbol: EPZ42924.1
gene_biotype: protein_coding
description:
  Aldehyde dismutase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_14070
symbol: EPZ42926.1
gene_biotype: protein_coding
description:
  3-phenylpropionate dioxygenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_14110
symbol: hisD-2
gene_biotype: protein_coding
description:
  Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.


ensembl_gene_id: N007_14135
symbol: glpK
gene_biotype: protein_coding
description:
  Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.


ensembl_gene_id: N007_14140
symbol: EPZ42940.1
gene_biotype: protein_coding
description:
  Glycerol transporter; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the MIP/aquaporin (TC 1.A.8) family.


ensembl_gene_id: N007_14145
symbol: EPZ42941.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA.


ensembl_gene_id: N007_14245
symbol: EPZ42787.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the pseudouridine synthase RsuA family.


ensembl_gene_id: N007_14310
symbol: EPZ42720.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.


ensembl_gene_id: N007_14320
symbol: EPZ42722.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.


ensembl_gene_id: N007_14435
symbol: EPZ42698.1
gene_biotype: protein_coding
description:
  12-oxophytodienoate reductase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_14485
symbol: EPZ42640.1
gene_biotype: protein_coding
description:
  Catabolite control protein A; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_14495
symbol: EPZ42642.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis; Belongs to the MecA family.


ensembl_gene_id: N007_14545
symbol: EPZ42652.1
gene_biotype: protein_coding
description:
  30S ribosomal protein S1; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_14560
symbol: engA
gene_biotype: protein_coding
description:
  GTP-binding protein Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.


ensembl_gene_id: N007_14565
symbol: plsY
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.


ensembl_gene_id: N007_14570
symbol: gpsA
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: N007_14575
symbol: gcvH
gene_biotype: protein_coding
description:
  Glycine cleavage system protein H; Is also involved in protein lipoylation via its role as an octanoyl/lipoyl carrier protein intermediate; Belongs to the GcvH family.


ensembl_gene_id: N007_14580
symbol: EPZ42659.1
gene_biotype: protein_coding
description:
  Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.


ensembl_gene_id: N007_14590
symbol: EPZ42660.1
gene_biotype: protein_coding
description:
  Transcription attenuation protein MtrB; Tryptophan RNA-binding attenuator protein; binds leader Trp transcript causing transcription termination; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_14600
symbol: menG
gene_biotype: protein_coding
description:
  Ubiquinone/menaquinone biosynthesis methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2).


ensembl_gene_id: N007_14610
symbol: ndk
gene_biotype: protein_coding
description:
  Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.


ensembl_gene_id: N007_14640
symbol: EPZ42670.1
gene_biotype: protein_coding
description:
  Biotin attachment protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_14660
symbol: EPZ42674.1
gene_biotype: protein_coding
description:
  Sodium/hydrogen exchanger; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_14730
symbol: mqo
gene_biotype: protein_coding
description:
  Malate:quinone oxidoreductase; Malate dehydrogenase; catalyzes the oxidation of malate to oxaloacetate; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_14765
symbol: kynB
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation.


ensembl_gene_id: N007_14770
symbol: kynU
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively.


ensembl_gene_id: N007_14775
symbol: kynA
gene_biotype: protein_coding
description:
  Tryptophan 2,3-dioxygenase; Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety.


ensembl_gene_id: N007_14855
symbol: EPZ42556.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the Dps family.


ensembl_gene_id: N007_15010
symbol: EPZ42432.1
gene_biotype: protein_coding
description:
  5-methyltetrahydrofolate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.


ensembl_gene_id: N007_15025
symbol: glyQS
gene_biotype: protein_coding
description:
  glycyl-tRNA synthetase; Catalyzes the attachment of glycine to tRNA(Gly). Belongs to the class-II aminoacyl-tRNA synthetase family.


ensembl_gene_id: N007_15035
symbol: lexA
gene_biotype: protein_coding
description:
  Hypothetical protein; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair.


ensembl_gene_id: N007_15100
symbol: EPZ42364.1
gene_biotype: protein_coding
description:
  Beta-glucosidase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the glycosyl hydrolase 3 family.


ensembl_gene_id: N007_15210
symbol: tyrS
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily.


ensembl_gene_id: N007_15335
symbol: EPZ42272.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the PEP-utilizing enzyme family.


ensembl_gene_id: N007_15340
symbol: EPZ42273.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation/dephosphorylation.


ensembl_gene_id: N007_15345
symbol: EPZ42274.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: N007_15360
symbol: EPZ42277.1
gene_biotype: protein_coding
description:
  Membrane protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_15365
symbol: EPZ42278.1
gene_biotype: protein_coding
description:
  ABC transporter; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_15385
symbol: queF
gene_biotype: protein_coding
description:
  NADPH-dependent 7-cyano-7-deazaguanine reductase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1). Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily.


ensembl_gene_id: N007_15430
symbol: EPZ42290.1
gene_biotype: protein_coding
description:
  Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.


ensembl_gene_id: N007_15450
symbol: EPZ42294.1
gene_biotype: protein_coding
description:
  UTP--glucose-1-phosphate uridylyltransferase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_15600
symbol: crcB
gene_biotype: protein_coding
description:
  Hypothetical protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.


ensembl_gene_id: N007_15645
symbol: EPZ42251.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the sulfur carrier protein TusA family.


ensembl_gene_id: N007_15655
symbol: EPZ42253.1
gene_biotype: protein_coding
description:
  DsrE family protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_15670
symbol: EPZ42256.1
gene_biotype: protein_coding
description:
  DNA damage-inducible protein DinB; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_15700
symbol: EPZ42262.1
gene_biotype: protein_coding
description:
  Cytochrome C553; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: N007_15795
symbol: EPZ42210.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: N007_15805
symbol: EPZ42197.1
gene_biotype: protein_coding
description:
  ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: N007_15815
symbol: cbiA
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.


ensembl_gene_id: N007_15830
symbol: EPZ42216.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the precorrin methyltransferase family.


ensembl_gene_id: N007_15840
symbol: cbiD
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A.


ensembl_gene_id: N007_15845
symbol: EPZ42219.1
gene_biotype: protein_coding
description:
  Precorrin-8X methylmutase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_16030
symbol: EPZ42147.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.


ensembl_gene_id: N007_16065
symbol: EPZ42154.1
gene_biotype: protein_coding
description:
  1-(5-phosphoribosyl)-5-amino-4-imidazole- carboxylate carboxylase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_16090
symbol: EPZ42126.1
gene_biotype: protein_coding
description:
  NADPH:quinone reductase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily.


ensembl_gene_id: N007_16105
symbol: sigI
gene_biotype: protein_coding
description:
  Hypothetical protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; Belongs to the sigma-70 factor family. SigI subfamily.


ensembl_gene_id: N007_16110
symbol: ruvB
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.


ensembl_gene_id: N007_16115
symbol: ruvA
gene_biotype: protein_coding
description:
  Hypothetical protein; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.


ensembl_gene_id: N007_16135
symbol: nadE
gene_biotype: protein_coding
description:
  NAD synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source; Belongs to the NAD synthetase family.


ensembl_gene_id: N007_16175
symbol: mutS2
gene_biotype: protein_coding
description:
  Hypothetical protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.


ensembl_gene_id: N007_16190
symbol: EPZ42115.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.


ensembl_gene_id: N007_16195
symbol: pheT
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.


ensembl_gene_id: N007_16200
symbol: pheS
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.


ensembl_gene_id: N007_16220
symbol: aroC
gene_biotype: protein_coding
description:
  Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.


ensembl_gene_id: N007_16225
symbol: aroB
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).


ensembl_gene_id: N007_16230
symbol: EPZ41907.1
gene_biotype: protein_coding
description:
  Chorismate mutase; Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis.


ensembl_gene_id: N007_16235
symbol: trpD
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).


ensembl_gene_id: N007_16240
symbol: trpC
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the TrpC family.


ensembl_gene_id: N007_16245
symbol: trpF
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the TrpF family.


ensembl_gene_id: N007_16250
symbol: trpB
gene_biotype: protein_coding
description:
  Tryptophan synthase subunit beta; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.


ensembl_gene_id: N007_16255
symbol: trpA
gene_biotype: protein_coding
description:
  Hypothetical protein; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.


ensembl_gene_id: N007_16260
symbol: EPZ41913.1
gene_biotype: protein_coding
description:
  3-deoxy-7-phosphoheptulonate synthase; Catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7-phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_16365
symbol: EPZ41847.1
gene_biotype: protein_coding
description:
  FAD-dependent pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_16415
symbol: EPZ41857.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate). Belongs to the alpha-IPM synthase/homocitrate synthase family.


ensembl_gene_id: N007_16425
symbol: EPZ41859.1
gene_biotype: protein_coding
description:
  Metabolite transporter; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_16465
symbol: EPZ41866.1
gene_biotype: protein_coding
description:
  NAD(P)H quinone oxidoreductase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_16470
symbol: cysH-2
gene_biotype: protein_coding
description:
  Hypothetical protein; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.


ensembl_gene_id: N007_16475
symbol: purN
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.


ensembl_gene_id: N007_16500
symbol: uppP-2
gene_biotype: protein_coding
description:
  UDP-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.


ensembl_gene_id: N007_16520
symbol: EPZ41795.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: N007_16535
symbol: macB
gene_biotype: protein_coding
description:
  ABC transporter; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.


ensembl_gene_id: N007_16595
symbol: EPZ41792.1
gene_biotype: protein_coding
description:
  Bactoprenol glucosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: N007_16605
symbol: EPZ41810.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the TPP enzyme family.


ensembl_gene_id: N007_16640
symbol: EPZ41817.1
gene_biotype: protein_coding
description:
  PTS beta-glucoside transporter subunit IIBC; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_16695
symbol: serC
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine.


ensembl_gene_id: N007_16700
symbol: EPZ41628.1
gene_biotype: protein_coding
description:
  3-phosphoglycerate dehydrogenase; Catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: N007_16705
symbol: EPZ41629.1
gene_biotype: protein_coding
description:
  Aspartate kinase; Catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the aspartokinase family.


ensembl_gene_id: N007_16710
symbol: argH
gene_biotype: protein_coding
description:
  Argininosuccinate lyase; Catalyzes the formation of arginine from (N-L-arginino)succinate; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_16715
symbol: argG
gene_biotype: protein_coding
description:
  Argininosuccinate synthase; Catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the argininosuccinate synthase family. Type 1 subfamily.


ensembl_gene_id: N007_16720
symbol: EPZ41632.1
gene_biotype: protein_coding
description:
  Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.


ensembl_gene_id: N007_16725
symbol: EPZ41633.1
gene_biotype: protein_coding
description:
  Glutamate synthase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_16730
symbol: EPZ41634.1
gene_biotype: protein_coding
description:
  Acetyltransferase; Catalyzes the formation of N-acetyl-L-glutamate from acetyl-CoA and L-glutamate; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the acetyltransferase family.


ensembl_gene_id: N007_16745
symbol: argC
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.


ensembl_gene_id: N007_16795
symbol: EPZ41647.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the UbiD family.


ensembl_gene_id: N007_16850
symbol: purK
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR).


ensembl_gene_id: N007_16855
symbol: purE
gene_biotype: protein_coding
description:
  N5-carboxyaminoimidazole ribonucleotide mutase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).


ensembl_gene_id: N007_16860
symbol: EPZ41576.1
gene_biotype: protein_coding
description:
  Fructose-bisphosphate aldolase; Catalyzes the formation of glycerone phosphate and D-glyceraldehyde 3-phosphate from D-fructose 1,6-bisphosphate; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_16865
symbol: EPZ41577.1
gene_biotype: protein_coding
description:
  6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.


ensembl_gene_id: N007_16870
symbol: ppc
gene_biotype: protein_coding
description:
  Hypothetical protein; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle; Belongs to the PEPCase type 1 family.


ensembl_gene_id: N007_16880
symbol: EPZ41580.1
gene_biotype: protein_coding
description:
  Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ABC transporter superfamily.


ensembl_gene_id: N007_16890
symbol: EPZ41582.1
gene_biotype: protein_coding
description:
  NAD-dependent malic enzyme; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_16905
symbol: EPZ41585.1
gene_biotype: protein_coding
description:
  Dihydrolipoamide succinyltransferase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_16935
symbol: EPZ41591.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the mannose-6-phosphate isomerase type 1 family.


ensembl_gene_id: N007_16950
symbol: EPZ41594.1
gene_biotype: protein_coding
description:
  Dehydrogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_17085
symbol: polC
gene_biotype: protein_coding
description:
  Hypothetical protein; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: N007_17090
symbol: hprK-2
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the ATP- as well as the pyrophosphate-dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK/P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P-Ser-HPr). The two antagonistic activities of HprK/P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sou [...]


ensembl_gene_id: N007_17100
symbol: purT
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate; Belongs to the PurK/PurT family.


ensembl_gene_id: N007_17200
symbol: mltG
gene_biotype: protein_coding
description:
  Hypothetical protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation.


ensembl_gene_id: N007_17205
symbol: EPZ41199.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.


ensembl_gene_id: N007_17210
symbol: EPZ41200.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the UPF0297 family.


ensembl_gene_id: N007_17215
symbol: alaS
gene_biotype: protein_coding
description:
  alanyl-tRNA synthase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.


ensembl_gene_id: N007_17245
symbol: EPZ41207.1
gene_biotype: protein_coding
description:
  Rrf2 family transcriptional regulator; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_17250
symbol: aspS
gene_biotype: protein_coding
description:
  aspartyl-tRNA synthase; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor end of tRNA(Asp). Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.


ensembl_gene_id: N007_17280
symbol: EPZ41214.1
gene_biotype: protein_coding
description:
  Gamma-aminobutyrate permease; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_17335
symbol: thiG
gene_biotype: protein_coding
description:
  Thiazole synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.


ensembl_gene_id: N007_17350
symbol: thiE
gene_biotype: protein_coding
description:
  Hypothetical protein; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.


ensembl_gene_id: N007_17560
symbol: pcp
gene_biotype: protein_coding
description:
  Hypothetical protein; Removes 5-oxoproline from various penultimate amino acid residues except L-proline; Belongs to the peptidase C15 family.


ensembl_gene_id: N007_17595
symbol: map-2
gene_biotype: protein_coding
description:
  Hypothetical protein; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.


ensembl_gene_id: N007_17650
symbol: EPZ41051.1
gene_biotype: protein_coding
description:
  FMN reductase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_17700
symbol: EPZ40962.1
gene_biotype: protein_coding
description:
  Adenylosuccinate lyase; Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.


ensembl_gene_id: N007_17705
symbol: purC
gene_biotype: protein_coding
description:
  Phosphoribosylaminoimidazole-succinocarboxamide synthase; Phage-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SAICAR synthetase family.


ensembl_gene_id: N007_17710
symbol: purS
gene_biotype: protein_coding
description:
  Hypothetical protein; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the am [...]


ensembl_gene_id: N007_17720
symbol: purL
gene_biotype: protein_coding
description:
  Phosphoribosylglycinamide synthetase; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the tr [...]


ensembl_gene_id: N007_17725
symbol: purF
gene_biotype: protein_coding
description:
  Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.


ensembl_gene_id: N007_17730
symbol: purM
gene_biotype: protein_coding
description:
  Phosphoribosylaminoimidazole synthetase; Phage-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: N007_17735
symbol: purH
gene_biotype: protein_coding
description:
  IMP cyclohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: N007_17740
symbol: purD
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the GARS family.


ensembl_gene_id: N007_17795
symbol: EPZ40819.1
gene_biotype: protein_coding
description:
  Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: N007_17845
symbol: EPZ40682.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the glutamate synthase family.


ensembl_gene_id: N007_18040
symbol: EPZ53147.1
gene_biotype: protein_coding
description:
  FAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_18050
symbol: tdk
gene_biotype: protein_coding
description:
  Thymidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: N007_18160
symbol: EPZ53124.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the D-glutamate cyclase family.


ensembl_gene_id: N007_18225
symbol: EPZ53104.1
gene_biotype: protein_coding
description:
  Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: N007_18345
symbol: ldh
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family.


ensembl_gene_id: N007_18395
symbol: EPZ53042.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes quinol oxidation with the concomitant reduction of oxygen to water. Subunit II transfers the electrons from a quinol to the binuclear center of the catalytic subunit I.


ensembl_gene_id: N007_18415
symbol: EPZ53046.1
gene_biotype: protein_coding
description:
  ABC transporter permease; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_18470
symbol: hfq
gene_biotype: protein_coding
description:
  RNA-binding protein Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family.


ensembl_gene_id: N007_18475
symbol: miaA
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.


ensembl_gene_id: N007_18485
symbol: mutL
gene_biotype: protein_coding
description:
  Hypothetical protein; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.


ensembl_gene_id: N007_18490
symbol: mutS
gene_biotype: protein_coding
description:
  Hypothetical protein; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.


ensembl_gene_id: N007_18500
symbol: miaB
gene_biotype: protein_coding
description:
  (dimethylallyl)adenosine tRNA methylthiotransferase; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.


ensembl_gene_id: N007_18570
symbol: EPZ53069.1
gene_biotype: protein_coding
description:
  Stage V sporulation protein S; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_18590
symbol: recA
gene_biotype: protein_coding
description:
  Recombinase RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.


ensembl_gene_id: N007_18635
symbol: EPZ53017.1
gene_biotype: protein_coding
description:
  Hisitidine kinase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_18655
symbol: EPZ53021.1
gene_biotype: protein_coding
description:
  2,5-diketo-D-gluconic acid reductase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_18740
symbol: EPZ53005.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the PdxA family.


ensembl_gene_id: N007_18805
symbol: iolB
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in the isomerization of 5-deoxy-glucuronate (5DG) to 5-dehydro-2-deoxy-D-gluconate (DKG or 2-deoxy-5-keto-D-gluconate).


ensembl_gene_id: N007_18810
symbol: iolC
gene_biotype: protein_coding
description:
  5-dehydro-2-deoxygluconokinase; Catalyzes the phosphorylation of 5-dehydro-2-deoxy-D- gluconate (2-deoxy-5-keto-D-gluconate or DKG) to 6-phospho-5-dehydro-2- deoxy-D-gluconate (DKGP).


ensembl_gene_id: N007_18815
symbol: iolD
gene_biotype: protein_coding
description:
  3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; Involved in the cleavage of the C1-C2 bond of 3D-(3,5/4)- trihydroxycyclohexane-1,2-dione (THcHDO) to yield 5-deoxy-glucuronate (5DG).


ensembl_gene_id: N007_18820
symbol: iolE
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the dehydration of inosose (2-keto-myo-inositol, 2KMI or 2,4,6/3,5-pentahydroxycyclohexanone) to 3D-(3,5/4)- trihydroxycyclohexane-1,2-dione (D-2,3-diketo-4-deoxy-epi-inositol).


ensembl_gene_id: N007_18825
symbol: iolG
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in the oxidation of myo-inositol (MI) and D-chiro- inositol (DCI) to 2-keto-myo-inositol (2KMI or 2-inosose) and 1-keto-D- chiro-inositol (1KDCI), respectively.


ensembl_gene_id: N007_18920
symbol: tpx
gene_biotype: protein_coding
description:
  Lipid hydroperoxide peroxidase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.


ensembl_gene_id: N007_18930
symbol: ureA
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the urease beta subunit family.


ensembl_gene_id: N007_18935
symbol: ureC
gene_biotype: protein_coding
description:
  Urease subunit alpha; Ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_18940
symbol: ureE
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly. Belongs to the UreE family.


ensembl_gene_id: N007_18945
symbol: ureF
gene_biotype: protein_coding
description:
  Hypothetical protein; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.


ensembl_gene_id: N007_18980
symbol: hemL-2
gene_biotype: protein_coding
description:
  Glutamate-1-semialdehyde aminotransferase; Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_18985
symbol: EPZ52952.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the glutathione peroxidase family.


ensembl_gene_id: N007_19070
symbol: EPZ52894.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the catalase family.


ensembl_gene_id: N007_19200
symbol: EPZ52882.1
gene_biotype: protein_coding
description:
  Inorganic phosphate transporter; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_19325
symbol: ppaC
gene_biotype: protein_coding
description:
  Pyrophosphatase; Catalyzes the hydrolysis of pyrophosphate to phosphate; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_19490
symbol: EPZ52819.1
gene_biotype: protein_coding
description:
  Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: N007_19500
symbol: gabD
gene_biotype: protein_coding
description:
  Succinate-semialdehyde dehdyrogenase; Catalyzes the formation of succinate from succinate semialdehyde; NADP dependent; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_19535
symbol: EPZ52828.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).


ensembl_gene_id: N007_19560
symbol: paaA
gene_biotype: protein_coding
description:
  phenylacetate-CoA oxygenase subunit PaaA; With PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_19625
symbol: EPZ52768.1
gene_biotype: protein_coding
description:
  Pyruvate dehydrogenase; Catalyzes the formation of acetate from pyruvate; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the TPP enzyme family.


ensembl_gene_id: N007_19660
symbol: EPZ52760.1
gene_biotype: protein_coding
description:
  Integrase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the 'phage' integrase family.


ensembl_gene_id: N007_19665
symbol: fdhD
gene_biotype: protein_coding
description:
  Hypothetical protein; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.


ensembl_gene_id: N007_19720
symbol: EPZ52746.1
gene_biotype: protein_coding
description:
  IclR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_19740
symbol: EPZ52750.1
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease III; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_19825
symbol: dapF
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.


ensembl_gene_id: N007_19855
symbol: EPZ52726.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro; Belongs to the HAD-like hydrolase superfamily. NagD family.


ensembl_gene_id: N007_19860
symbol: nrdR
gene_biotype: protein_coding
description:
  ATPase; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family.


ensembl_gene_id: N007_19865
symbol: EPZ52728.1
gene_biotype: protein_coding
description:
  Ribonucleoside-diphosphate reductase; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen.


ensembl_gene_id: N007_19910
symbol: EPZ52652.1
gene_biotype: protein_coding
description:
  Choline ABC transporter permease; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_19925
symbol: EPZ52655.1
gene_biotype: protein_coding
description:
  acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_19930
symbol: EPZ52656.1
gene_biotype: protein_coding
description:
  AMP-dependent synthetase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_19940
symbol: EPZ52658.1
gene_biotype: protein_coding
description:
  3-ketoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_20025
symbol: mtnK
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate.


ensembl_gene_id: N007_20230
symbol: EPZ52606.1
gene_biotype: protein_coding
description:
  Agmatinase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the arginase family.


ensembl_gene_id: N007_20235
symbol: speE
gene_biotype: protein_coding
description:
  Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.


ensembl_gene_id: N007_20260
symbol: lepA
gene_biotype: protein_coding
description:
  GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.


ensembl_gene_id: N007_20265
symbol: EPZ52579.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: N007_20270
symbol: hrcA
gene_biotype: protein_coding
description:
  Hypothetical protein; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons.


ensembl_gene_id: N007_20275
symbol: grpE
gene_biotype: protein_coding
description:
  Hypothetical protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dep [...]


ensembl_gene_id: N007_20285
symbol: dnaJ
gene_biotype: protein_coding
description:
  Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...]


ensembl_gene_id: N007_20290
symbol: prmA
gene_biotype: protein_coding
description:
  Hypothetical protein; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family.


ensembl_gene_id: N007_20295
symbol: EPZ52585.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.


ensembl_gene_id: N007_20315
symbol: rpsU
gene_biotype: protein_coding
description:
  30S ribosomal protein S21; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the bacterial ribosomal protein bS21 family.


ensembl_gene_id: N007_20335
symbol: EPZ52576.1
gene_biotype: protein_coding
description:
  Phosphate starvation protein PhoH; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: N007_20340
symbol: EPZ52593.1
gene_biotype: protein_coding
description:
  7TM receptor with intracellular metal dependent phosphohydrolase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_20345
symbol: ybeY
gene_biotype: protein_coding
description:
  Hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.


ensembl_gene_id: N007_20355
symbol: era
gene_biotype: protein_coding
description:
  GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.


ensembl_gene_id: N007_20375
symbol: dnaG
gene_biotype: protein_coding
description:
  Hypothetical protein; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.


ensembl_gene_id: N007_20380
symbol: sigA
gene_biotype: protein_coding
description:
  RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.


ensembl_gene_id: N007_20395
symbol: EPZ52604.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the GTP cyclohydrolase I type 2/NIF3 family.


ensembl_gene_id: N007_20435
symbol: pduC
gene_biotype: protein_coding
description:
  Propanediol dehydratase large subunit; With pduED catalyzes the formation of propionaldehyde from 1,2-propanediol; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_20445
symbol: EPZ52563.1
gene_biotype: protein_coding
description:
  NADH dehydrogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_20450
symbol: EPZ52564.1
gene_biotype: protein_coding
description:
  Alkyl hydroperoxide reductase subunit C; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.


ensembl_gene_id: N007_20500
symbol: EPZ52574.1
gene_biotype: protein_coding
description:
  GNAT family acetyltransferase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_20535
symbol: pstB
gene_biotype: protein_coding
description:
  Phosphate ABC transporter ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.


ensembl_gene_id: N007_20570
symbol: EPZ52500.1
gene_biotype: protein_coding
description:
  Phosphate ABC transporter permease; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_20575
symbol: EPZ52501.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: N007_20580
symbol: EPZ52502.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the PstS family.


ensembl_gene_id: N007_20590
symbol: menH
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes a proton abstraction reaction that results in 2,5- elimination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC) and the formation of 2-succinyl-6- hydroxy-2,4-cyclohexadiene-1-carboxylate (SHCHC).


ensembl_gene_id: N007_20595
symbol: menD
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Belongs to the TPP enzyme family. MenD subfamily.


ensembl_gene_id: N007_20605
symbol: menE
gene_biotype: protein_coding
description:
  Hypothetical protein; Converts 2-succinylbenzoate (OSB) to 2-succinylbenzoyl-CoA (OSB-CoA); Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily.


ensembl_gene_id: N007_20610
symbol: menB
gene_biotype: protein_coding
description:
  Dihydroxynaphthoic acid synthetase; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA).


ensembl_gene_id: N007_20615
symbol: menA
gene_biotype: protein_coding
description:
  Hypothetical protein; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily.


ensembl_gene_id: N007_20645
symbol: EPZ51659.1
gene_biotype: protein_coding
description:
  Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_20660
symbol: EPZ51662.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.


ensembl_gene_id: N007_20830
symbol: EPZ51617.1
gene_biotype: protein_coding
description:
  ATP-dependent Lon protease; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_20875
symbol: EPZ50913.1
gene_biotype: protein_coding
description:
  Ammonia channel protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_20880
symbol: EPZ50914.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the glutamine synthetase family.


ensembl_gene_id: N007_20950
symbol: EPZ50909.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: N007_20960
symbol: serS
gene_biotype: protein_coding
description:
  seryl-tRNA synthase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).


ensembl_gene_id: N007_20965
symbol: pdxT
gene_biotype: protein_coding
description:
  Glutamine amidotransferase; Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS.


ensembl_gene_id: N007_20970
symbol: pdxS
gene_biotype: protein_coding
description:
  Pyridoxal biosynthesis protein; Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5- phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively. Belongs to the PdxS/SNZ family.


ensembl_gene_id: N007_20975
symbol: guaB
gene_biotype: protein_coding
description:
  Inosine 5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.


ensembl_gene_id: N007_21010
symbol: EPZ50872.1
gene_biotype: protein_coding
description:
  Glutamine synthetase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_21025
symbol: hflX
gene_biotype: protein_coding
description:
  Hypothetical protein; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.


ensembl_gene_id: N007_21225
symbol: EPZ49191.1
gene_biotype: protein_coding
description:
  Thymidylate kinase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_21305
symbol: EPZ49182.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the UPF0145 family.


ensembl_gene_id: N007_21335
symbol: xylA
gene_biotype: protein_coding
description:
  Xylose isomerase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the xylose isomerase family.


ensembl_gene_id: N007_21340
symbol: xpt
gene_biotype: protein_coding
description:
  Hypothetical protein; Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis.


ensembl_gene_id: N007_21440
symbol: EPZ48831.1
gene_biotype: protein_coding
description:
  RNA-directed DNA polymerase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: N007_21475
symbol: fosB
gene_biotype: protein_coding
description:
  Fosmidomycin resistance protein; Metallothiol transferase which confers resistance to fosfomycin by catalyzing the addition of a thiol cofactor to fosfomycin. L-cysteine is probably the physiological thiol donor. Belongs to the fosfomycin resistance protein family. FosB subfamily.


ensembl_gene_id: N007_21580
symbol: EPZ47967.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily.


