# geneInfo

ensembl_gene_id: TMS3_0114585
symbol: KFX68721.1
gene_biotype: protein_coding
description:
  leucyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0114590
symbol: KFX68722.1
gene_biotype: protein_coding
description:
  Glyoxalase I; Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.


ensembl_gene_id: TMS3_0114595
symbol: argG
gene_biotype: protein_coding
description:
  Argininosuccinate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the argininosuccinate synthase family. Type 1 subfamily.


ensembl_gene_id: TMS3_0114610
symbol: rnt
gene_biotype: protein_coding
description:
  Ribonuclease T; Trims short 3' overhangs of a variety of RNA species, leaving a one or two nucleotide 3' overhang. Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A). Also appears to be involved in tRNA biosynthesis.


ensembl_gene_id: TMS3_0114625
symbol: KFX68729.1
gene_biotype: protein_coding
description:
  Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.


ensembl_gene_id: TMS3_0114630
symbol: KFX68730.1
gene_biotype: protein_coding
description:
  Glutaredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutaredoxin family. Monothiol subfamily.


ensembl_gene_id: TMS3_0114645
symbol: KFX68733.1
gene_biotype: protein_coding
description:
  Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.


ensembl_gene_id: TMS3_0114650
symbol: KFX68734.1
gene_biotype: protein_coding
description:
  Iron ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.


ensembl_gene_id: TMS3_0114665
symbol: KFX68736.1
gene_biotype: protein_coding
description:
  ATP synthase F0F1 subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0114675
symbol: glpK
gene_biotype: protein_coding
description:
  Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.


ensembl_gene_id: TMS3_0114680
symbol: KFX68739.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily.


ensembl_gene_id: TMS3_0114690
symbol: glpD
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate dehydrogenase; In Escherichia coli this homodimeric enzyme is expressed under aerobic conditions; anaerobic expression is repressed by the arcAB system; converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8; associates with the cytoplasmic membrane; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: TMS3_0114705
symbol: metE
gene_biotype: protein_coding
description:
  5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family.


ensembl_gene_id: TMS3_0114710
symbol: KFX68744.1
gene_biotype: protein_coding
description:
  XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: TMS3_0114735
symbol: KFX68749.1
gene_biotype: protein_coding
description:
  Acriflavin resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: TMS3_0114745
symbol: KFX68751.1
gene_biotype: protein_coding
description:
  Glutathione-dependent formaldehyde-activating protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0114785
symbol: KFX68759.1
gene_biotype: protein_coding
description:
  Glycosyl transferase family 51; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0114810
symbol: KFX68764.1
gene_biotype: protein_coding
description:
  Peroxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0114830
symbol: KFX68768.1
gene_biotype: protein_coding
description:
  Ethanolamine utilization protein EutQ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0114840
symbol: KFX68770.1
gene_biotype: protein_coding
description:
  rubredoxin-NAD(+) reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FAD-dependent oxidoreductase family.


ensembl_gene_id: TMS3_0114870
symbol: KFX68774.1
gene_biotype: protein_coding
description:
  Proline:sodium symporter PutP; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.


ensembl_gene_id: TMS3_0114875
symbol: KFX68775.1
gene_biotype: protein_coding
description:
  Pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: TMS3_0114890
symbol: KFX68778.1
gene_biotype: protein_coding
description:
  Diguanylate phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0114895
symbol: KFX68779.1
gene_biotype: protein_coding
description:
  Ribosomal protein S3AE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0114915
symbol: KFX68781.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: TMS3_0114930
symbol: KFX68783.1
gene_biotype: protein_coding
description:
  Mandelate racemase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the mandelate racemase/muconate lactonizing enzyme family.


ensembl_gene_id: TMS3_0114945
symbol: KFX68786.1
gene_biotype: protein_coding
description:
  Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the methyltransferase superfamily.


ensembl_gene_id: TMS3_0114950
symbol: KFX68787.1
gene_biotype: protein_coding
description:
  Cd(II)/Pb(II)-responsive transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0114980
symbol: KFX68792.1
gene_biotype: protein_coding
description:
  Bilirubin oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0114985
symbol: KFX68793.1
gene_biotype: protein_coding
description:
  Electron transporter SenC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0115015
symbol: KFX68798.1
gene_biotype: protein_coding
description:
  Cytochrome C2; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0115060
symbol: KFX68806.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 4-oxalocrotonate tautomerase family.


ensembl_gene_id: TMS3_0115125
symbol: KFX68818.1
gene_biotype: protein_coding
description:
  Aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0115170
symbol: lon-2
gene_biotype: protein_coding
description:
  Lon protease; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.


ensembl_gene_id: TMS3_0115175
symbol: KFX68828.1
gene_biotype: protein_coding
description:
  Peptidase inhibitor I42; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0115195
symbol: cmoA
gene_biotype: protein_coding
description:
  tRNA methyltransferase; Catalyzes the conversion of S-adenosyl-L-methionine (SAM) to carboxy-S-adenosyl-L-methionine (Cx-SAM).


ensembl_gene_id: TMS3_0115200
symbol: cmoB
gene_biotype: protein_coding
description:
  tRNA methyltransferase; Catalyzes carboxymethyl transfer from carboxy-S-adenosyl-L- methionine (Cx-SAM) to 5-hydroxyuridine (ho5U) to form 5- carboxymethoxyuridine (cmo5U) at position 34 in tRNAs.


ensembl_gene_id: TMS3_0115205
symbol: pdxJ
gene_biotype: protein_coding
description:
  Pyridoxine 5'-phosphate synthase; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate.


ensembl_gene_id: TMS3_0115215
symbol: era
gene_biotype: protein_coding
description:
  GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.


ensembl_gene_id: TMS3_0115220
symbol: rnc
gene_biotype: protein_coding
description:
  Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.


ensembl_gene_id: TMS3_0115230
symbol: KFX68839.1
gene_biotype: protein_coding
description:
  Signal peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S26 family.


ensembl_gene_id: TMS3_0115235
symbol: lepA
gene_biotype: protein_coding
description:
  Elongation factor 4; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.


ensembl_gene_id: TMS3_0115240
symbol: KFX68841.1
gene_biotype: protein_coding
description:
  Serine peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S1C family.


ensembl_gene_id: TMS3_0115250
symbol: KFX68843.1
gene_biotype: protein_coding
description:
  RNA polymerase sigma-H factor AlgU; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0115260
symbol: KFX68845.1
gene_biotype: protein_coding
description:
  RNA polymerase sigma-H factor; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: TMS3_0115280
symbol: KFX68849.1
gene_biotype: protein_coding
description:
  Aminomethyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0115310
symbol: KFX68854.1
gene_biotype: protein_coding
description:
  Tricarboxylic transport membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0115320
symbol: KFX68856.1
gene_biotype: protein_coding
description:
  Tripartite tricarboxylate transporter TctA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0115335
symbol: ung
gene_biotype: protein_coding
description:
  uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.


ensembl_gene_id: TMS3_0115360
symbol: KFX68864.1
gene_biotype: protein_coding
description:
  enoyl-CoA hydratase; Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family.


ensembl_gene_id: TMS3_0115365
symbol: KFX68865.1
gene_biotype: protein_coding
description:
  enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0115370
symbol: KFX68866.1
gene_biotype: protein_coding
description:
  3-hydroxyisobutyrate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HIBADH-related family.


ensembl_gene_id: TMS3_0115375
symbol: KFX68867.1
gene_biotype: protein_coding
description:
  Tryptophan synthase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0115380
symbol: KFX68868.1
gene_biotype: protein_coding
description:
  Periplasmic protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0115395
symbol: KFX68870.1
gene_biotype: protein_coding
description:
  Lipid kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0115405
symbol: KFX68872.1
gene_biotype: protein_coding
description:
  Lauroyl acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0115410
symbol: KFX68873.1
gene_biotype: protein_coding
description:
  Urea carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0115435
symbol: KFX68878.1
gene_biotype: protein_coding
description:
  Pseudouridine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pseudouridine synthase RsuA family.


ensembl_gene_id: TMS3_0115490
symbol: KFX68886.1
gene_biotype: protein_coding
description:
  Catechol 1,2-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0115495
symbol: KFX68887.1
gene_biotype: protein_coding
description:
  Muconolactone delta-isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the muconolactone Delta-isomerase family.


ensembl_gene_id: TMS3_0115500
symbol: KFX68888.1
gene_biotype: protein_coding
description:
  Muconate cycloisomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the mandelate racemase/muconate lactonizing enzyme family.


ensembl_gene_id: TMS3_0115510
symbol: benD
gene_biotype: protein_coding
description:
  1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Catalyzes the degradation of 2-hydro-1,2-dihydroxy benzoate to catechol; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0115515
symbol: KFX68891.1
gene_biotype: protein_coding
description:
  NADH oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0115520
symbol: KFX68892.1
gene_biotype: protein_coding
description:
  Benzene 1,2-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0115550
symbol: KFX68898.1
gene_biotype: protein_coding
description:
  RND transporter MFP subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: TMS3_0115575
symbol: KFX68903.1
gene_biotype: protein_coding
description:
  Ribose-phosphate pyrophosphokinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ribose-phosphate pyrophosphokinase family.


ensembl_gene_id: TMS3_0115580
symbol: KFX68904.1
gene_biotype: protein_coding
description:
  Poly-gamma-glutamate biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0115590
symbol: KFX68906.1
gene_biotype: protein_coding
description:
  Phosphoribosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0115600
symbol: KFX68908.1
gene_biotype: protein_coding
description:
  Acriflavine resistance protein B; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: TMS3_0115605
symbol: KFX68909.1
gene_biotype: protein_coding
description:
  Multidrug transporter; Part of a tripartite efflux system composed of MdtA, MdtB and MdtC which confers resistance against novobiocin and deoxycholate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: TMS3_0115610
symbol: KFX68910.1
gene_biotype: protein_coding
description:
  Secretion protein HlyD; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: TMS3_0115625
symbol: tpx
gene_biotype: protein_coding
description:
  Peroxidase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Tpx subfamily.


ensembl_gene_id: TMS3_0115650
symbol: KFX68918.1
gene_biotype: protein_coding
description:
  Exonuclease III; Removes the damaged DNA at cytosines and guanines by cleaving on the 3' side of the AP site by a beta-elimination reaction; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0115690
symbol: KFX68926.1
gene_biotype: protein_coding
description:
  L-dehydroascorbate transporter large permease subunit; TRAP family transporter; with YiaMO is involved in the uptake of L-dehydroascorbate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0115695
symbol: KFX68927.1
gene_biotype: protein_coding
description:
  Gluconokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0115710
symbol: KFX68930.1
gene_biotype: protein_coding
description:
  3-hydroxy-2-methylbutyryl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: TMS3_0115730
symbol: KFX68934.1
gene_biotype: protein_coding
description:
  Quinohemoprotein amine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0115770
symbol: KFX68942.1
gene_biotype: protein_coding
description:
  Peptidase S8 and S53 subtilisin kexin sedolisin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0115785
symbol: KFX68945.1
gene_biotype: protein_coding
description:
  Peptidase S8; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S8 family.


ensembl_gene_id: TMS3_0115795
symbol: KFX68947.1
gene_biotype: protein_coding
description:
  isovaleryl-CoA dehydrogenase; Catalyzes the formation of 3-methylbut-2-enoyl CoA from 3-methylbutanoyl CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0115800
symbol: KFX68948.1
gene_biotype: protein_coding
description:
  methylcrotonoyl-CoA carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0115805
symbol: KFX68949.1
gene_biotype: protein_coding
description:
  Catalyzes the hydration of gamma-carboxygeranoyl-CoA to 3-hydroxy-gamma-carboxygeranoyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0115815
symbol: KFX68950.1
gene_biotype: protein_coding
description:
  3-methylcrotonyl-CoA carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0115820
symbol: KFX68951.1
gene_biotype: protein_coding
description:
  hydroxymethylglutaryl-CoA lyase; Catalyzes the formation of acetoacetate and acetyl-CoA from 3-hydroxy-3-methylglutaryl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0115830
symbol: KFX68953.1
gene_biotype: protein_coding
description:
  succinyl-CoA:3-ketoacid-CoA transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0115845
symbol: KFX68956.1
gene_biotype: protein_coding
description:
  acetoacetyl-CoA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0115860
symbol: KFX68959.1
gene_biotype: protein_coding
description:
  Chorismate mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0115910
symbol: greB
gene_biotype: protein_coding
description:
  Transcription elongation factor GreB; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length.


ensembl_gene_id: TMS3_0115920
symbol: KFX68971.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family.


ensembl_gene_id: TMS3_0115925
symbol: KFX68972.1
gene_biotype: protein_coding
description:
  Lactonizing lipase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0115930
symbol: lifO
gene_biotype: protein_coding
description:
  Lipase chaperone; May be involved in the folding of the extracellular lipase during its passage through the periplasm; Belongs to the lipase chaperone family.


ensembl_gene_id: TMS3_0115940
symbol: KFX68975.1
gene_biotype: protein_coding
description:
  Glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0115945
symbol: KFX68976.1
gene_biotype: protein_coding
description:
  Preprotein translocase subunit TatD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0115955
symbol: KFX68978.1
gene_biotype: protein_coding
description:
  acyl-CoA thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0115960
symbol: merA
gene_biotype: protein_coding
description:
  Mercuric reductase; Resistance to Hg(2+) in bacteria appears to be governed by a specialized system which includes mercuric reductase. MerA protein is responsible for volatilizing mercury as Hg(0). Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.


ensembl_gene_id: TMS3_0115970
symbol: merP
gene_biotype: protein_coding
description:
  Mercury transporter; Involved in mercury resistance. Acts as a mercury scavenger that specifically binds to a mercuric ion in the periplasm and probably passes it to the cytoplasmic mercuric reductase MerA via the mercuric transport protein MerT.


ensembl_gene_id: TMS3_0115975
symbol: KFX68982.1
gene_biotype: protein_coding
description:
  Mercuric transport protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0115985
symbol: KFX68984.1
gene_biotype: protein_coding
description:
  Transglutaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0116015
symbol: selU
gene_biotype: protein_coding
description:
  tRNA 2-selenouridine synthase; Involved in the post-transcriptional modification of the uridine at the wobble position (U34) of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Catalyzes the conversion of 2-thiouridine (S2U-RNA) to 2- selenouridine (Se2U-RNA). Acts in a two-step process involving geranylation of 2-thiouridine (S2U) to S-geranyl-2-thiouridine (geS2U) and subsequent selenation of the latter derivative to 2-selenouridine (Se2U) in the tRNA chain.


ensembl_gene_id: TMS3_0116085
symbol: KFX69003.1
gene_biotype: protein_coding
description:
  Phosphohistidine phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0116095
symbol: gpsA
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: TMS3_0116110
symbol: fabA
gene_biotype: protein_coding
description:
  3-hydroxydecanoyl-ACP dehydratase; Necessary for the introduction of cis unsaturation into fatty acids. Catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to E- (2)-decenoyl-ACP and then its isomerization to Z-(3)-decenoyl-ACP. Can catalyze the dehydratase reaction for beta-hydroxyacyl-ACPs with saturated chain lengths up to 16:0, being most active on intermediate chain length.


ensembl_gene_id: TMS3_0116115
symbol: KFX69009.1
gene_biotype: protein_coding
description:
  FabB, beta-Ketoacyl-ACP synthase I, KASI; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.


ensembl_gene_id: TMS3_0116145
symbol: KFX69015.1
gene_biotype: protein_coding
description:
  5-oxo-L-prolinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0116150
symbol: KFX69016.1
gene_biotype: protein_coding
description:
  Dienelactone hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0116200
symbol: KFX69026.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid transporter; Component of the transport system for branched-chain amino acids.


ensembl_gene_id: TMS3_0116205
symbol: KFX69027.1
gene_biotype: protein_coding
description:
  FAD-binding molybdopterin dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0116210
symbol: KFX69028.1
gene_biotype: protein_coding
description:
  Xanthine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0116220
symbol: KFX69029.1
gene_biotype: protein_coding
description:
  Molybdenum cofactor sulfurylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0116225
symbol: KFX69030.1
gene_biotype: protein_coding
description:
  Guanine deaminase; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia; Belongs to the metallo-dependent hydrolases superfamily. ATZ/TRZ family.


ensembl_gene_id: TMS3_0116250
symbol: KFX69035.1
gene_biotype: protein_coding
description:
  Amino acid transporter LysE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0116265
symbol: KFX69037.1
gene_biotype: protein_coding
description:
  Allantoinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0116270
symbol: KFX69038.1
gene_biotype: protein_coding
description:
  OHCU decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0116275
symbol: alc
gene_biotype: protein_coding
description:
  Allantoicase; Catalyzes the formation of S-ureidoglycolate and urea from allantoate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the allantoicase family.


ensembl_gene_id: TMS3_0116280
symbol: allA
gene_biotype: protein_coding
description:
  Ureidoglycolate hydrolase; Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source.


ensembl_gene_id: TMS3_0116295
symbol: KFX69043.1
gene_biotype: protein_coding
description:
  Xanthine permease XanP; High-affinity transporter for xanthine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0116300
symbol: KFX69044.1
gene_biotype: protein_coding
description:
  Nucleoside-binding outer membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0116345
symbol: KFX69052.1
gene_biotype: protein_coding
description:
  UTP--glucose-1-phosphate uridylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0116390
symbol: KFX69057.1
gene_biotype: protein_coding
description:
  Resolvase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0116395
symbol: KFX69058.1
gene_biotype: protein_coding
description:
  Restriction endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0116420
symbol: KFX69061.1
gene_biotype: protein_coding
description:
  CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: TMS3_0116425
symbol: uvrC
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.


ensembl_gene_id: TMS3_0116465
symbol: potA-3
gene_biotype: protein_coding
description:
  Spermidine/putrescine ABC transporter ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.


ensembl_gene_id: TMS3_0116475
symbol: KFX69070.1
gene_biotype: protein_coding
description:
  Polyamine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0116500
symbol: KFX69073.1
gene_biotype: protein_coding
description:
  Cobalamin synthesis protein P47K; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0116510
symbol: KFX69075.1
gene_biotype: protein_coding
description:
  Arginine uptake transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0116525
symbol: KFX69078.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TPP enzyme family.


ensembl_gene_id: TMS3_0116540
symbol: KFX69079.1
gene_biotype: protein_coding
description:
  Membrane protein; Binds to the HflBKC complex which modulates FtsH activity; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the BI1 family.


ensembl_gene_id: TMS3_0116550
symbol: KFX69081.1
gene_biotype: protein_coding
description:
  Sulfur relay protein TusC; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DsrF/TusC family.


ensembl_gene_id: TMS3_0116555
symbol: KFX69082.1
gene_biotype: protein_coding
description:
  Sulfur relay protein DsrH; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0116570
symbol: KFX69085.1
gene_biotype: protein_coding
description:
  Glutathionyl-hydroquinone reductase YqjG; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0116575
symbol: cysG
gene_biotype: protein_coding
description:
  Sirohydrochlorin ferrochelatase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme. Belongs to the precorrin methyltransferase family.  In the N-terminal section; belongs to the precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase family.


ensembl_gene_id: TMS3_0116580
symbol: serS
gene_biotype: protein_coding
description:
  seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).


ensembl_gene_id: TMS3_0116585
symbol: crcB
gene_biotype: protein_coding
description:
  Camphor resistance protein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.


ensembl_gene_id: TMS3_0116590
symbol: KFX69089.1
gene_biotype: protein_coding
description:
  Recombination factor protein RarA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0116600
symbol: KFX69091.1
gene_biotype: protein_coding
description:
  Cell division protein FtsK; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0116605
symbol: KFX69092.1
gene_biotype: protein_coding
description:
  Thioredoxin reductase; Catalyzes the transfer of electrons from NADPH to thioredoxin; FAD/NAD(P) binding; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0116610
symbol: aat
gene_biotype: protein_coding
description:
  leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine.


ensembl_gene_id: TMS3_0116615
symbol: bpt
gene_biotype: protein_coding
description:
  arginyl-tRNA-protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily.


ensembl_gene_id: TMS3_0116620
symbol: infA
gene_biotype: protein_coding
description:
  Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.


ensembl_gene_id: TMS3_0116625
symbol: clpA
gene_biotype: protein_coding
description:
  Clp protease ClpX; ATPase and specificity subunit of the ClpA-ClpP ATP dependent serine protease; directs protease to specific substrates; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ClpA/ClpB family.


ensembl_gene_id: TMS3_0116630
symbol: clpS
gene_biotype: protein_coding
description:
  Clp protease ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.


ensembl_gene_id: TMS3_0116650
symbol: KFX69101.1
gene_biotype: protein_coding
description:
  Converts isocitrate to alpha ketoglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0116655
symbol: KFX69102.1
gene_biotype: protein_coding
description:
  Isocitrate dehydrogenase; NADP-specific, catalyzes the formation of 2-oxoglutarate from isocitrate or oxalosuccinate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the monomeric-type IDH family.


ensembl_gene_id: TMS3_0116660
symbol: nudJ
gene_biotype: protein_coding
description:
  NUDIX hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Nudix hydrolase family. NudJ subfamily.


ensembl_gene_id: TMS3_0116665
symbol: mnmA
gene_biotype: protein_coding
description:
  tRNA 2-thiouridylase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.


ensembl_gene_id: TMS3_0116680
symbol: KFX69107.1
gene_biotype: protein_coding
description:
  Adenylosuccinate lyase; Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.


ensembl_gene_id: TMS3_0116695
symbol: KFX69110.1
gene_biotype: protein_coding
description:
  Histone acetyltransferase HPA2; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0116700
symbol: KFX69111.1
gene_biotype: protein_coding
description:
  Secretin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0116705
symbol: KFX69112.1
gene_biotype: protein_coding
description:
  Isocitrate lyase; Catalyzes the first step in the glyoxalate cycle, which converts lipids to carbohydrates; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0116710
symbol: KFX69113.1
gene_biotype: protein_coding
description:
  Tat pathway signal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0116715
symbol: nuoA
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit A; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family.


ensembl_gene_id: TMS3_0116720
symbol: nuoB
gene_biotype: protein_coding
description:
  NADH dehydrogenase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: TMS3_0116725
symbol: nuoC
gene_biotype: protein_coding
description:
  NADH:ubiquinone oxidoreductase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the C-terminal section; belongs to the complex I 49 kDa subunit family.


ensembl_gene_id: TMS3_0116730
symbol: KFX69117.1
gene_biotype: protein_coding
description:
  NADH dehydrogenase; Catalyzes the transfer of electrons from NADH to quinone; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0116735
symbol: KFX69118.1
gene_biotype: protein_coding
description:
  NADH dehydrogenase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family.


ensembl_gene_id: TMS3_0116740
symbol: KFX69119.1
gene_biotype: protein_coding
description:
  NADH dehydrogenase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family.


ensembl_gene_id: TMS3_0116745
symbol: nuoH
gene_biotype: protein_coding
description:
  NADH:ubiquinone oxidoreductase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone.


ensembl_gene_id: TMS3_0116755
symbol: KFX69122.1
gene_biotype: protein_coding
description:
  NADH dehydrogenase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: TMS3_0116760
symbol: nuoK
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit K; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family.


ensembl_gene_id: TMS3_0116765
symbol: KFX69124.1
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit L; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0116770
symbol: KFX69125.1
gene_biotype: protein_coding
description:
  NADH:ubiquinone oxidoreductase subunit M; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0116775
symbol: nuoN
gene_biotype: protein_coding
description:
  NADH:ubiquinone oxidoreductase subunit N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family.


ensembl_gene_id: TMS3_0116830
symbol: KFX69135.1
gene_biotype: protein_coding
description:
  Transmembrane anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0116840
symbol: KFX69137.1
gene_biotype: protein_coding
description:
  3-oxoacyl-ACP synthase; Catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0116895
symbol: KFX69146.1
gene_biotype: protein_coding
description:
  Cytochrome C peroxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0116945
symbol: KFX69151.1
gene_biotype: protein_coding
description:
  Multidrug transporter MATE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0116955
symbol: KFX69153.1
gene_biotype: protein_coding
description:
  Flagellar motor protein MotA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0116975
symbol: sucD
gene_biotype: protein_coding
description:
  succinyl-CoA synthetase subunit alpha; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.


ensembl_gene_id: TMS3_0116980
symbol: sucC
gene_biotype: protein_coding
description:
  succinyl-CoA synthetase subunit beta; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.


ensembl_gene_id: TMS3_0116985
symbol: KFX69157.1
gene_biotype: protein_coding
description:
  E3 component of 2-oxoglutarate dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0116990
symbol: KFX69158.1
gene_biotype: protein_coding
description:
  Dihydrolipoamide succinyltransferase; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2).


ensembl_gene_id: TMS3_0116995
symbol: KFX69159.1
gene_biotype: protein_coding
description:
  2-oxoglutarate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0117000
symbol: sdhB
gene_biotype: protein_coding
description:
  Part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0117005
symbol: sdhA
gene_biotype: protein_coding
description:
  Part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.


ensembl_gene_id: TMS3_0117015
symbol: KFX69163.1
gene_biotype: protein_coding
description:
  Succinate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0117020
symbol: gltA
gene_biotype: protein_coding
description:
  Type II enzyme; in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate; allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation; forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A; functions in TCA cycle, glyoxylate cycle and respiration; enzyme from Helicobacter pylori is not inhibited by NADH; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the citrate synthase family.


ensembl_gene_id: TMS3_0117040
symbol: KFX69168.1
gene_biotype: protein_coding
description:
  Exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0117045
symbol: ppnP
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions.


ensembl_gene_id: TMS3_0117070
symbol: KFX69174.1
gene_biotype: protein_coding
description:
  ATP-NAD kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0117080
symbol: pdxB
gene_biotype: protein_coding
description:
  Erythronate-4-phosphate dehydrogenase; Catalyzes the oxidation of erythronate-4-phosphate to 3- hydroxy-2-oxo-4-phosphonooxybutanoate.


ensembl_gene_id: TMS3_0117100
symbol: tusA
gene_biotype: protein_coding
description:
  Sulfurtransferase; Sulfur carrier protein which probably makes part of a sulfur- relay system; Belongs to the sulfur carrier protein TusA family.


ensembl_gene_id: TMS3_0117110
symbol: rlmM
gene_biotype: protein_coding
description:
  23S rRNA methyltransferase; Catalyzes the 2'-O-methylation at nucleotide C2498 in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily.


ensembl_gene_id: TMS3_0117125
symbol: algL-2
gene_biotype: protein_coding
description:
  poly(beta-D-mannuronate) lyase; Depolymerizes alginate by cleaving the beta-1,4 glycosidic bond: may enhance the production of alginate by controlling the length of the polymer chain during export; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0117175
symbol: KFX69194.1
gene_biotype: protein_coding
description:
  Cbb3-type cytochrome c oxidase subunit I; CcoN; FixN; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heme-copper respiratory oxidase family.


ensembl_gene_id: TMS3_0117180
symbol: KFX69195.1
gene_biotype: protein_coding
description:
  Cbb3-type cytochrome c oxidase subunit II; CcoO; FixO; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0117185
symbol: KFX69196.1
gene_biotype: protein_coding
description:
  Cytochrome oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0117225
symbol: KFX69204.1
gene_biotype: protein_coding
description:
  Carbonate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0117230
symbol: KFX69205.1
gene_biotype: protein_coding
description:
  Cytochrome oxidase maturation protein Cbb3; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0117235
symbol: KFX69206.1
gene_biotype: protein_coding
description:
  Cytochrome biogenesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0117240
symbol: KFX69207.1
gene_biotype: protein_coding
description:
  Coproporphyrinogen III oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: TMS3_0117245
symbol: KFX69208.1
gene_biotype: protein_coding
description:
  Transcriptional regulator; Global transcription factor that controls the expression of over 100 target genes in response to anoxia; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0117250
symbol: apt
gene_biotype: protein_coding
description:
  Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.


ensembl_gene_id: TMS3_0117270
symbol: KFX69213.1
gene_biotype: protein_coding
description:
  Response regulator receiver protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0117310
symbol: recR
gene_biotype: protein_coding
description:
  Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.


ensembl_gene_id: TMS3_0117315
symbol: KFX69220.1
gene_biotype: protein_coding
description:
  Nucleoid-associated protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.


ensembl_gene_id: TMS3_0117320
symbol: dnaX
gene_biotype: protein_coding
description:
  DNA polymerase III subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: TMS3_0117345
symbol: KFX69224.1
gene_biotype: protein_coding
description:
  ArsC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.


ensembl_gene_id: TMS3_0117350
symbol: KFX69225.1
gene_biotype: protein_coding
description:
  Arsenic transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0117355
symbol: KFX69226.1
gene_biotype: protein_coding
description:
  Dipicolinate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial histone-like protein family.


ensembl_gene_id: TMS3_0117360
symbol: KFX69227.1
gene_biotype: protein_coding
description:
  Tfp pilus assembly protein PilF; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0117365
symbol: KFX69228.1
gene_biotype: protein_coding
description:
  Type II secretion system protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0117370
symbol: KFX69229.1
gene_biotype: protein_coding
description:
  Secretion system protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0117375
symbol: KFX69230.1
gene_biotype: protein_coding
description:
  Pilus assembly protein CpaF; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0117390
symbol: KFX69233.1
gene_biotype: protein_coding
description:
  Pilus assembly protein TadG; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0117395
symbol: KFX69234.1
gene_biotype: protein_coding
description:
  Pilus assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0117405
symbol: KFX69236.1
gene_biotype: protein_coding
description:
  Pilus assembly protein CpaC; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial secretin family.


ensembl_gene_id: TMS3_0117410
symbol: KFX69237.1
gene_biotype: protein_coding
description:
  Pilus assembly protein CpaB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0117435
symbol: ligA
gene_biotype: protein_coding
description:
  NAD-dependent DNA ligase LigA; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA; Belongs to the NAD-dependent DNA ligase family. LigA subfamily.


ensembl_gene_id: TMS3_0117440
symbol: zipA
gene_biotype: protein_coding
description:
  Cell division protein ZipA; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins.


ensembl_gene_id: TMS3_0117445
symbol: smc
gene_biotype: protein_coding
description:
  Chromosome segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family.


ensembl_gene_id: TMS3_0117455
symbol: KFX69246.1
gene_biotype: protein_coding
description:
  Alkane 1-monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0117470
symbol: phhA
gene_biotype: protein_coding
description:
  Phenylalanine 4-hydroxylase; phenylalanine 4-hydroxylase; catalyzes the formation of 4a-hydroxytetrahydrobiopterin and tyrosine from phenylalanine and tetrahydrobiopterin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0117475
symbol: phhB
gene_biotype: protein_coding
description:
  4-alpha-hydroxytetrahydrobiopterin dehydratase activity; catalyzes the formation of (6R)-6-(L-erythro-1,2-dihydroxypropyl)-7, 8-dihydro-6H-pterin from (6R)-6-(L-erythro-1,2-dihydroxypropyl)-5,6,7, 8-tetrahydro-4a-hydroxypterin; functions in recycling tetrahydrobiopterin (BH4) in phenylalanine hydroxylase reaction; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0117495
symbol: KFX69254.1
gene_biotype: protein_coding
description:
  Glucosylglycerol-phosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0117540
symbol: KFX69263.1
gene_biotype: protein_coding
description:
  ATP-dependent Zn protease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0117545
symbol: KFX69264.1
gene_biotype: protein_coding
description:
  Phosphatidylglycerophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0117555
symbol: KFX69266.1
gene_biotype: protein_coding
description:
  Keto-deoxy-phosphogluconate aldolase; Catalyzes the formation of pyruvate and glyoxylate from 4-hydroxy-2-oxoglutarate; or pyruvate and D-glyceraldehyde 3-phosphate from 2-dehydro-3-deoxy-D-glyconate 6-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0117570
symbol: KFX69269.1
gene_biotype: protein_coding
description:
  Transcriptional regulator; Represses the expression of the zwf, eda, glp and gap; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0117595
symbol: KFX69273.1
gene_biotype: protein_coding
description:
  Pyruvate kinase; Catalyzes the formation of phosphoenolpyruvate from pyruvate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0117610
symbol: KFX69276.1
gene_biotype: protein_coding
description:
  Sugar ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.


ensembl_gene_id: TMS3_0117640
symbol: glk
gene_biotype: protein_coding
description:
  Glucokinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial glucokinase family.


ensembl_gene_id: TMS3_0117645
symbol: edd
gene_biotype: protein_coding
description:
  Phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family.


ensembl_gene_id: TMS3_0117665
symbol: KFX69287.1
gene_biotype: protein_coding
description:
  MFS sugar transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0117675
symbol: KFX69289.1
gene_biotype: protein_coding
description:
  Class I peptide chain release factor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0117700
symbol: KFX69293.1
gene_biotype: protein_coding
description:
  Maleylacetoacetate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0117715
symbol: KFX69296.1
gene_biotype: protein_coding
description:
  4-hydroxyphenylpyruvate dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0117740
symbol: KFX69300.1
gene_biotype: protein_coding
description:
  Curli production assembly/transport protein CsgG; Involved in the stability of the curlin proteins during assembly; involved in the secretion of the major curlin subunit CsgA across the outer membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0117745
symbol: KFX69301.1
gene_biotype: protein_coding
description:
  Curli production assembly protein CsgF; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0117750
symbol: KFX69302.1
gene_biotype: protein_coding
description:
  Curli production assembly protein CsgE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0117780
symbol: KFX69306.1
gene_biotype: protein_coding
description:
  Peptidase M50; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0117785
symbol: KFX69307.1
gene_biotype: protein_coding
description:
  Aspartyl beta-hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0117805
symbol: KFX69311.1
gene_biotype: protein_coding
description:
  Tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0117815
symbol: KFX69312.1
gene_biotype: protein_coding
description:
  Sulfotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0117845
symbol: KFX69317.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0176 family.


ensembl_gene_id: TMS3_0117850
symbol: KFX69318.1
gene_biotype: protein_coding
description:
  BolA family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the BolA/IbaG family.


ensembl_gene_id: TMS3_0117865
symbol: KFX68521.1
gene_biotype: protein_coding
description:
  Glyoxylate carboligase; Catalyzes the formation of 2-hydroxy-3-oxopropanoate (tartronate semialdehyde) from two molecules of glyoxylate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0117880
symbol: moaA
gene_biotype: protein_coding
description:
  Molybdenum cofactor biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.


ensembl_gene_id: TMS3_0117890
symbol: KFX68526.1
gene_biotype: protein_coding
description:
  Guanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0117930
symbol: KFX68532.1
gene_biotype: protein_coding
description:
  Carboxypeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0117975
symbol: KFX68537.1
gene_biotype: protein_coding
description:
  Protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0117980
symbol: KFX68538.1
gene_biotype: protein_coding
description:
  Type VI secretion protein VasK; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0117990
symbol: KFX68540.1
gene_biotype: protein_coding
description:
  Type VI secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0118045
symbol: KFX68551.1
gene_biotype: protein_coding
description:
  ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ClpA/ClpB family.


ensembl_gene_id: TMS3_0118090
symbol: KFX68560.1
gene_biotype: protein_coding
description:
  Type VI secretion protein ImpA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0118100
symbol: KFX68562.1
gene_biotype: protein_coding
description:
  ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: TMS3_0118105
symbol: KFX68563.1
gene_biotype: protein_coding
description:
  Histidine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0118140
symbol: KFX68570.1
gene_biotype: protein_coding
description:
  Histidine utilization repressor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0118160
symbol: KFX68573.1
gene_biotype: protein_coding
description:
  Catalyzes the deimination of N-formimino-L-glutamate to ammonia and N-formyl-L-glutamate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0118170
symbol: hutH
gene_biotype: protein_coding
description:
  Catalyzes the degradation of histidine to urocanate and ammmonia; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0118180
symbol: KFX68577.1
gene_biotype: protein_coding
description:
  phytanoyl-CoA dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0118190
symbol: hutI
gene_biotype: protein_coding
description:
  Imidazolonepropionase; Catalyzing the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate, the third step in the histidine degradation pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0118195
symbol: KFX68579.1
gene_biotype: protein_coding
description:
  N-formylglutamate amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0118205
symbol: KFX68581.1
gene_biotype: protein_coding
description:
  General secretion pathway protein GspG; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0118250
symbol: KFX68588.1
gene_biotype: protein_coding
description:
  General secretion pathway protein GspE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0118265
symbol: KFX68591.1
gene_biotype: protein_coding
description:
  Pilus assembly protein PilO; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0118285
symbol: KFX68594.1
gene_biotype: protein_coding
description:
  Type II secretion system protein G; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0118290
symbol: KFX68595.1
gene_biotype: protein_coding
description:
  Type II secretory pathway, pseudopilin PulG; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0118350
symbol: KFX68606.1
gene_biotype: protein_coding
description:
  Thiamine permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the purine-cytosine permease (2.A.39) family.


ensembl_gene_id: TMS3_0118360
symbol: KFX68608.1
gene_biotype: protein_coding
description:
  glutamyl-tRNA amidotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0118385
symbol: KFX68613.1
gene_biotype: protein_coding
description:
  Catalyzes the thiolytic cleavage of beta-ketoadipyl-CoA to succinate and acetyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family.


ensembl_gene_id: TMS3_0118390
symbol: KFX68614.1
gene_biotype: protein_coding
description:
  3-oxoadipate:succinyl-CoA transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0118425
symbol: KFX68221.1
gene_biotype: protein_coding
description:
  Short-chain fatty acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0118430
symbol: KFX68222.1
gene_biotype: protein_coding
description:
  RNA signal recognition particle 4.5S RNA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0118460
symbol: KFX68228.1
gene_biotype: protein_coding
description:
  Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: TMS3_0118480
symbol: KFX68232.1
gene_biotype: protein_coding
description:
  Flavodoxin; An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0118500
symbol: KFX68236.1
gene_biotype: protein_coding
description:
  Dihydrofolate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0118505
symbol: folE
gene_biotype: protein_coding
description:
  GTP cyclohydrolase; Involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0118510
symbol: folX
gene_biotype: protein_coding
description:
  D-erythro-7,8-dihydroneopterin triphosphate epimerase; Catalyzes the formation of dihydromonapterin triphosphate from dihydroneopterin triphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0118515
symbol: KFX68239.1
gene_biotype: protein_coding
description:
  Cell division protein DedD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0118520
symbol: KFX68240.1
gene_biotype: protein_coding
description:
  HopJ type III effector protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0118535
symbol: cysZ
gene_biotype: protein_coding
description:
  Cysteine biosynthesis protein CysZ; High affinity, high specificity proton-dependent sulfate transporter, which mediates sulfate uptake. Provides the sulfur source for the cysteine synthesis pathway; Belongs to the CysZ family.


ensembl_gene_id: TMS3_0118540
symbol: KFX68244.1
gene_biotype: protein_coding
description:
  4-hydroxy-2-oxovalerate aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HpcH/HpaI aldolase family.


ensembl_gene_id: TMS3_0118545
symbol: KFX68245.1
gene_biotype: protein_coding
description:
  TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0118550
symbol: KFX68246.1
gene_biotype: protein_coding
description:
  Carboxylate--amine ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0118555
symbol: KFX68247.1
gene_biotype: protein_coding
description:
  Siderophore biosynthesis protein, IucA/IucC family; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0118565
symbol: KFX68249.1
gene_biotype: protein_coding
description:
  Iron transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0118570
symbol: KFX68250.1
gene_biotype: protein_coding
description:
  Diaminopimelate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Orn/Lys/Arg decarboxylase class-II family.


ensembl_gene_id: TMS3_0118575
symbol: KFX68251.1
gene_biotype: protein_coding
description:
  1,2-oxophytodienoate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0118585
symbol: KFX68253.1
gene_biotype: protein_coding
description:
  Glutathione peroxidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutathione peroxidase family.


ensembl_gene_id: TMS3_0118595
symbol: KFX68255.1
gene_biotype: protein_coding
description:
  Pressure-regulated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0118600
symbol: ackA
gene_biotype: protein_coding
description:
  Propionate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.


ensembl_gene_id: TMS3_0118605
symbol: KFX68257.1
gene_biotype: protein_coding
description:
  Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.


ensembl_gene_id: TMS3_0118650
symbol: KFX68266.1
gene_biotype: protein_coding
description:
  Long-chain fatty acid--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0118665
symbol: KFX68269.1
gene_biotype: protein_coding
description:
  Glycerate dehydrogenase; Catalyzes the reduction of hydroxypyruvate to form D-glycerate, using NADH as an electron donor; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: TMS3_0118670
symbol: rsmC
gene_biotype: protein_coding
description:
  16S rRNA methyltransferase; Specifically methylates the guanine in position 1207 of 16S rRNA in the 30S particle; Belongs to the methyltransferase superfamily. RsmC family.


ensembl_gene_id: TMS3_0118690
symbol: KFX68274.1
gene_biotype: protein_coding
description:
  Peptidase M48; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0118710
symbol: KFX68278.1
gene_biotype: protein_coding
description:
  LITAF-like zinc ribbon domain containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0118735
symbol: mqo
gene_biotype: protein_coding
description:
  Malate:quinone oxidoreductase; Malate dehydrogenase; catalyzes the oxidation of malate to oxaloacetate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0118760
symbol: KFX68287.1
gene_biotype: protein_coding
description:
  enoyl-CoA hydratase; Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0118775
symbol: KFX68290.1
gene_biotype: protein_coding
description:
  Fumarate hydratase; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.


ensembl_gene_id: TMS3_0118780
symbol: KFX68291.1
gene_biotype: protein_coding
description:
  Cardiolipin synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the phospholipase D family. Cardiolipin synthase subfamily.


ensembl_gene_id: TMS3_0118805
symbol: KFX68296.1
gene_biotype: protein_coding
description:
  Isopropylmalate/homocitrate/citramalate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0118810
symbol: KFX68297.1
gene_biotype: protein_coding
description:
  Thermostable hemolysin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0118815
symbol: KFX68298.1
gene_biotype: protein_coding
description:
  Long-chain acyl-CoA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0118830
symbol: KFX68301.1
gene_biotype: protein_coding
description:
  Tetratricopeptide repeat protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0118865
symbol: KFX68307.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the mandelate racemase/muconate lactonizing enzyme family.


ensembl_gene_id: TMS3_0118870
symbol: KFX68308.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the BCCT transporter (TC 2.A.15) family.


ensembl_gene_id: TMS3_0118905
symbol: KFX68312.1
gene_biotype: protein_coding
description:
  S-transferase; YghU; B2989; one of eight putative glutathione transferase proteins from E. coli; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0118920
symbol: KFX68315.1
gene_biotype: protein_coding
description:
  Carboxymuconolactone decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0118930
symbol: KFX68317.1
gene_biotype: protein_coding
description:
  Arylsulfate sulfotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0118935
symbol: KFX68318.1
gene_biotype: protein_coding
description:
  Glutamine amidotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0118945
symbol: KFX68320.1
gene_biotype: protein_coding
description:
  Amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0118960
symbol: KFX68323.1
gene_biotype: protein_coding
description:
  Hemolysin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0118985
symbol: KFX68328.1
gene_biotype: protein_coding
description:
  NADH:flavin oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0119025
symbol: argP
gene_biotype: protein_coding
description:
  LysR family transcriptional regulator; Controls the transcription of genes involved in arginine and lysine metabolism; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: TMS3_0119040
symbol: KFX68339.1
gene_biotype: protein_coding
description:
  Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.


ensembl_gene_id: TMS3_0119055
symbol: KFX68342.1
gene_biotype: protein_coding
description:
  LemA family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0119065
symbol: KFX68344.1
gene_biotype: protein_coding
description:
  Thiol oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0119070
symbol: KFX68345.1
gene_biotype: protein_coding
description:
  Imelysin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0119100
symbol: groEL
gene_biotype: protein_coding
description:
  Molecular chaperone GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.


ensembl_gene_id: TMS3_0119105
symbol: groS
gene_biotype: protein_coding
description:
  Molecular chaperone GroES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.


ensembl_gene_id: TMS3_0119110
symbol: KFX68352.1
gene_biotype: protein_coding
description:
  Exclusion suppressor FxsA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0119115
symbol: KFX68353.1
gene_biotype: protein_coding
description:
  Heme iron utilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0119125
symbol: KFX68355.1
gene_biotype: protein_coding
description:
  Peptide chain release factor RF-3; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0119130
symbol: KFX68356.1
gene_biotype: protein_coding
description:
  DNA base-flipping protein YbaZ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0119140
symbol: KFX68358.1
gene_biotype: protein_coding
description:
  InaA protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0119150
symbol: KFX68360.1
gene_biotype: protein_coding
description:
  Nucleotide-binding protein; Nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ; the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0234 family.


ensembl_gene_id: TMS3_0119170
symbol: KFX68364.1
gene_biotype: protein_coding
description:
  ATP--cobalamin adenosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Cob(I)alamin adenosyltransferase family.


ensembl_gene_id: TMS3_0119230
symbol: argJ
gene_biotype: protein_coding
description:
  Ornithine acetyltransferase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family.


ensembl_gene_id: TMS3_0119235
symbol: secA
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. Belongs to the SecA family.


ensembl_gene_id: TMS3_0119245
symbol: KFX68378.1
gene_biotype: protein_coding
description:
  Zn-ribbon-containing, possibly RNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0119250
symbol: lpxC
gene_biotype: protein_coding
description:
  UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the LpxC family.


ensembl_gene_id: TMS3_0119255
symbol: ftsZ
gene_biotype: protein_coding
description:
  Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.


ensembl_gene_id: TMS3_0119260
symbol: ftsA
gene_biotype: protein_coding
description:
  Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.


ensembl_gene_id: TMS3_0119265
symbol: ftsQ
gene_biotype: protein_coding
description:
  Cell division protein FtsQ; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly.


ensembl_gene_id: TMS3_0119270
symbol: ddl
gene_biotype: protein_coding
description:
  D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.


ensembl_gene_id: TMS3_0119280
symbol: murG
gene_biotype: protein_coding
description:
  UDP-diphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.


ensembl_gene_id: TMS3_0119285
symbol: ftsW
gene_biotype: protein_coding
description:
  Cell division protein FtsW; Peptidoglycan polymerase that is essential for cell division. Belongs to the SEDS family. FtsW subfamily.


ensembl_gene_id: TMS3_0119290
symbol: murD
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.


ensembl_gene_id: TMS3_0119295
symbol: mraY
gene_biotype: protein_coding
description:
  phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.


ensembl_gene_id: TMS3_0119300
symbol: murF
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.


ensembl_gene_id: TMS3_0119305
symbol: murE
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily.


ensembl_gene_id: TMS3_0119310
symbol: ftsI
gene_biotype: protein_coding
description:
  Cell division protein; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum.


ensembl_gene_id: TMS3_0119315
symbol: ftsL
gene_biotype: protein_coding
description:
  Cell division protein FtsL; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic.


ensembl_gene_id: TMS3_0119320
symbol: rsmH
gene_biotype: protein_coding
description:
  16S rRNA methyltransferase; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.


ensembl_gene_id: TMS3_0119325
symbol: mraZ
gene_biotype: protein_coding
description:
  Cell division protein MraZ; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MraZ family.


ensembl_gene_id: TMS3_0119330
symbol: rsmI
gene_biotype: protein_coding
description:
  Methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.


ensembl_gene_id: TMS3_0119340
symbol: KFX68397.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0102 family.


ensembl_gene_id: TMS3_0119345
symbol: gmhA
gene_biotype: protein_coding
description:
  DnaA initiator-associating protein DiaA; Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate.


ensembl_gene_id: TMS3_0119360
symbol: KFX68401.1
gene_biotype: protein_coding
description:
  Stringent starvation protein A; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0119370
symbol: KFX68403.1
gene_biotype: protein_coding
description:
  Cytochrome B; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.


ensembl_gene_id: TMS3_0119375
symbol: KFX68404.1
gene_biotype: protein_coding
description:
  Ubiquinol-cytochrome C reductase; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.


ensembl_gene_id: TMS3_0119380
symbol: rpsI
gene_biotype: protein_coding
description:
  30S ribosomal protein S9; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS9 family.


ensembl_gene_id: TMS3_0119385
symbol: rplM
gene_biotype: protein_coding
description:
  50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.


ensembl_gene_id: TMS3_0119410
symbol: trpS
gene_biotype: protein_coding
description:
  tryptophan--tRNA ligase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: TMS3_0119420
symbol: KFX68413.1
gene_biotype: protein_coding
description:
  Cytochrome D ubiquinol oxidase subunit III; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0119425
symbol: cysN
gene_biotype: protein_coding
description:
  Adenylylsulfate kinase; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.


ensembl_gene_id: TMS3_0119430
symbol: cysD
gene_biotype: protein_coding
description:
  Sulfate adenylyltransferase subunit 2; With CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0119440
symbol: KFX68417.1
gene_biotype: protein_coding
description:
  2-alkenal reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0119450
symbol: KFX68419.1
gene_biotype: protein_coding
description:
  Nickel ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0119455
symbol: hisC
gene_biotype: protein_coding
description:
  Histidinol-phosphate aminotransferase; Catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.


ensembl_gene_id: TMS3_0119465
symbol: hisG
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase catalytic subunit; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Short subfamily.


ensembl_gene_id: TMS3_0119470
symbol: murA
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.


ensembl_gene_id: TMS3_0119480
symbol: KFX68425.1
gene_biotype: protein_coding
description:
  Anti-sigma factor antagonist; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0119485
symbol: KFX68426.1
gene_biotype: protein_coding
description:
  Toluene tolerance protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0119490
symbol: KFX68427.1
gene_biotype: protein_coding
description:
  Organic solvent ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0119500
symbol: KFX68429.1
gene_biotype: protein_coding
description:
  ABC transporter maintaining outer membrane lipid asymmetry; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0119505
symbol: KFX68430.1
gene_biotype: protein_coding
description:
  D-arabinose 5-phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0119510
symbol: KFX68431.1
gene_biotype: protein_coding
description:
  3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8- phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate; Belongs to the KdsC family.


ensembl_gene_id: TMS3_0119515
symbol: lptC
gene_biotype: protein_coding
description:
  Lipopolysaccharide ABC transporter permease; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. Facilitates the transfer of LPS from the inner membrane to the periplasmic protein LptA. Could be a docking site for LptA.


ensembl_gene_id: TMS3_0119520
symbol: lptA
gene_biotype: protein_coding
description:
  Organic solvent tolerance protein OstA; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm.


ensembl_gene_id: TMS3_0119525
symbol: KFX68434.1
gene_biotype: protein_coding
description:
  Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0119530
symbol: KFX68435.1
gene_biotype: protein_coding
description:
  RNA polymerase factor sigma-54; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: TMS3_0119535
symbol: KFX68436.1
gene_biotype: protein_coding
description:
  Ribosome hibernation promoting factor HPF; YhbH; resting ribosome-binding protein involved in ribosome stabilization and preservation in stationary phase; binds specifically 100S ribosomes (an inactive ribosome product of a 70S ribosome dimerization); seems to be involved in modulation of the sigma(54) (RpoN) activity for quorum sensing; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0119540
symbol: KFX68437.1
gene_biotype: protein_coding
description:
  PTS fructose transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0119550
symbol: KFX68439.1
gene_biotype: protein_coding
description:
  Phosphocarrier protein HPr; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0119555
symbol: pmbA
gene_biotype: protein_coding
description:
  Peptidase PmbA; Protease involved in proteolytic processing of the antibiotic Microcin B17 and in sensitivity to the DNA gyrase inhibitor LetD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0119560
symbol: KFX68441.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0307 family.


ensembl_gene_id: TMS3_0119565
symbol: tldD
gene_biotype: protein_coding
description:
  Protease TldD; Responsible for the proteolytic maturation of the E. coli pMccB17 plasmid-encoded microcin B17, an exported protein that targets the essential topoisomerase II DNA gyrase; degrades the E. coli plasmid F-encoded CcdA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0119580
symbol: KFX68445.1
gene_biotype: protein_coding
description:
  Involved in the processing of the 5'end of 16S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0119585
symbol: KFX68446.1
gene_biotype: protein_coding
description:
  Septum formation protein Maf; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.


ensembl_gene_id: TMS3_0119590
symbol: KFX68447.1
gene_biotype: protein_coding
description:
  Rod shape-determining protein MreD; Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins. Belongs to the MreD family.


ensembl_gene_id: TMS3_0119600
symbol: KFX68449.1
gene_biotype: protein_coding
description:
  Rod shape-determining protein MreB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0119605
symbol: gatC
gene_biotype: protein_coding
description:
  glutamyl-tRNA amidotransferase; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.


ensembl_gene_id: TMS3_0119610
symbol: gatA
gene_biotype: protein_coding
description:
  glutamyl-tRNA amidotransferase; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).


ensembl_gene_id: TMS3_0119615
symbol: gatB
gene_biotype: protein_coding
description:
  glutamyl-tRNA amidotransferase; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily.


ensembl_gene_id: TMS3_0119620
symbol: rlpA
gene_biotype: protein_coding
description:
  Lipoprotein; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.


ensembl_gene_id: TMS3_0119625
symbol: KFX68454.1
gene_biotype: protein_coding
description:
  Sodium:calcium antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0119635
symbol: KFX68456.1
gene_biotype: protein_coding
description:
  Malate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0119650
symbol: KFX68459.1
gene_biotype: protein_coding
description:
  Periplasmic/secreted protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0119665
symbol: KFX68462.1
gene_biotype: protein_coding
description:
  Peptide ABC transporter permease; Transports peptides consisting of two or three amino acids; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0119670
symbol: KFX68463.1
gene_biotype: protein_coding
description:
  Peptide transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0119675
symbol: dppD
gene_biotype: protein_coding
description:
  DppD and DppF are the ATP-binding components of the ABC dipeptide transport system DppABCDF; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0119680
symbol: KFX68465.1
gene_biotype: protein_coding
description:
  Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.


ensembl_gene_id: TMS3_0119705
symbol: KFX68470.1
gene_biotype: protein_coding
description:
  Ligand-gated channel protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0119710
symbol: KFX68471.1
gene_biotype: protein_coding
description:
  Fe(II)-dependent oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0119715
symbol: KFX68472.1
gene_biotype: protein_coding
description:
  Sel1 repeat-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0119745
symbol: KFX68478.1
gene_biotype: protein_coding
description:
  Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0119755
symbol: KFX68480.1
gene_biotype: protein_coding
description:
  Rrf2 family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0119770
symbol: KFX68483.1
gene_biotype: protein_coding
description:
  Aspartate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0119775
symbol: KFX68484.1
gene_biotype: protein_coding
description:
  Decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TPP enzyme family.


ensembl_gene_id: TMS3_0119780
symbol: KFX68485.1
gene_biotype: protein_coding
description:
  acyl-CoA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0119820
symbol: KFX68493.1
gene_biotype: protein_coding
description:
  Ornithine decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Orn/Lys/Arg decarboxylase class-II family.


ensembl_gene_id: TMS3_0119825
symbol: prfC
gene_biotype: protein_coding
description:
  Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.


ensembl_gene_id: TMS3_0119830
symbol: KFX68495.1
gene_biotype: protein_coding
description:
  DNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0119840
symbol: KFX68497.1
gene_biotype: protein_coding
description:
  1-phosphofructokinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the carbohydrate kinase PfkB family.


ensembl_gene_id: TMS3_0119845
symbol: KFX68498.1
gene_biotype: protein_coding
description:
  PTS fructose transporter subunit IIA; Phosphoenolpyruvate (PEP)-dependent, sugar transporting phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; the phosphoenolpyruvate-protein phosphotransferase transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein HPr; HPr transfers the phosphoryl group to subunit A; subunit IIA transfers a phosphoryl group to subunit IIB; subunit IIB transfers the phosphoryl group to the substrate; part of the phosphoenolpyruvat [...]


ensembl_gene_id: TMS3_0119855
symbol: KFX68500.1
gene_biotype: protein_coding
description:
  Hydrolase TatD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0119875
symbol: KFX68503.1
gene_biotype: protein_coding
description:
  N-acetyl-anhydromuranmyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0119880
symbol: KFX68504.1
gene_biotype: protein_coding
description:
  Thymidine phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0119895
symbol: KFX68506.1
gene_biotype: protein_coding
description:
  Methylation; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the N-Me-Phe pilin family.


ensembl_gene_id: TMS3_0119905
symbol: KFX68508.1
gene_biotype: protein_coding
description:
  Type II secretion system protein F; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0119910
symbol: KFX68509.1
gene_biotype: protein_coding
description:
  Methyltransferase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.


ensembl_gene_id: TMS3_0119915
symbol: coaE
gene_biotype: protein_coding
description:
  dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.


ensembl_gene_id: TMS3_0119920
symbol: KFX68511.1
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0119935
symbol: KFX68514.1
gene_biotype: protein_coding
description:
  Molybdenum cofactor sulfurase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0119940
symbol: KFX68515.1
gene_biotype: protein_coding
description:
  50s ribosomal protein l13; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0119945
symbol: KFX68516.1
gene_biotype: protein_coding
description:
  NADH dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0119950
symbol: KFX68517.1
gene_biotype: protein_coding
description:
  Helicase UvrD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0119965
symbol: KFX68520.1
gene_biotype: protein_coding
description:
  Glucosylglycerolphosphate phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0119990
symbol: KFX68167.1
gene_biotype: protein_coding
description:
  Nuclease; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family.


ensembl_gene_id: TMS3_0119995
symbol: KFX68168.1
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0120045
symbol: KFX68174.1
gene_biotype: protein_coding
description:
  Von Willebrand factor A; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0120115
symbol: KFX68188.1
gene_biotype: protein_coding
description:
  DNA repair protein RadC; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0758 family.


ensembl_gene_id: TMS3_0120165
symbol: queE-2
gene_biotype: protein_coding
description:
  7-cyano-7-deazaguanine reductase; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds.


ensembl_gene_id: TMS3_0120220
symbol: KFX68205.1
gene_biotype: protein_coding
description:
  Antirestriction protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0120230
symbol: KFX68207.1
gene_biotype: protein_coding
description:
  RepA replication protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0120240
symbol: KFX68209.1
gene_biotype: protein_coding
description:
  Chromosome partitioning protein ParB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0120265
symbol: KFX68214.1
gene_biotype: protein_coding
description:
  5-aminolevulinate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0120290
symbol: KFX68219.1
gene_biotype: protein_coding
description:
  D-alanyl-D-alanine endopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: TMS3_0120325
symbol: KFX68097.1
gene_biotype: protein_coding
description:
  Hyphothetical protein CP11; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0120355
symbol: KFX68102.1
gene_biotype: protein_coding
description:
  Conjugal transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0120365
symbol: KFX68104.1
gene_biotype: protein_coding
description:
  Single-stranded DNA-binding protein; Binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0120375
symbol: topA
gene_biotype: protein_coding
description:
  DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]


ensembl_gene_id: TMS3_0120410
symbol: KFX68110.1
gene_biotype: protein_coding
description:
  Dihydroneopterin aldolase; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily.


ensembl_gene_id: TMS3_0120445
symbol: KFX68117.1
gene_biotype: protein_coding
description:
  Pilus assembly protein PilL; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0120475
symbol: KFX68123.1
gene_biotype: protein_coding
description:
  Pilus assembly protein PilX; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0120570
symbol: KFX68139.1
gene_biotype: protein_coding
description:
  Methyl-accepting chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0120590
symbol: KFX68143.1
gene_biotype: protein_coding
description:
  dTDP-glucose 4,6-dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0120595
symbol: KFX68144.1
gene_biotype: protein_coding
description:
  Conjugal transfer protein TraG; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0120720
symbol: KFX68158.1
gene_biotype: protein_coding
description:
  Long-chain fatty acid--CoA ligase; Activates fatty acids by binding to coenzyme A; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0120735
symbol: KFX68161.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the rubredoxin family.


ensembl_gene_id: TMS3_0120775
symbol: nadA
gene_biotype: protein_coding
description:
  Quinolinate synthase A; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate; Belongs to the quinolinate synthase A family. Type 1 subfamily.


ensembl_gene_id: TMS3_0120780
symbol: KFX67657.1
gene_biotype: protein_coding
description:
  Peptidase M48; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state.


ensembl_gene_id: TMS3_0120785
symbol: KFX67658.1
gene_biotype: protein_coding
description:
  Response regulator SirA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sulfur carrier protein TusA family.


ensembl_gene_id: TMS3_0120790
symbol: KFX67659.1
gene_biotype: protein_coding
description:
  Permase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0120805
symbol: dapA
gene_biotype: protein_coding
description:
  Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).


ensembl_gene_id: TMS3_0120815
symbol: purC
gene_biotype: protein_coding
description:
  Phosphoribosylaminoimidazole-succinocarboxamide synthase; Catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0120825
symbol: KFX67665.1
gene_biotype: protein_coding
description:
  DNA invertase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0120885
symbol: KFX67675.1
gene_biotype: protein_coding
description:
  Recombinase RmuC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0120915
symbol: KFX67681.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid transport; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0120985
symbol: KFX67692.1
gene_biotype: protein_coding
description:
  NAD(P)H-quinone oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0120990
symbol: KFX67693.1
gene_biotype: protein_coding
description:
  Alkyl hydroperoxide reductase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.


ensembl_gene_id: TMS3_0121005
symbol: KFX67696.1
gene_biotype: protein_coding
description:
  Catalyzes the oxidation of dihydrolipoamide to lipoamide; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0121020
symbol: KFX67698.1
gene_biotype: protein_coding
description:
  4,5-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0121045
symbol: KFX67702.1
gene_biotype: protein_coding
description:
  Spermidine/putrescine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.


ensembl_gene_id: TMS3_0121060
symbol: KFX67705.1
gene_biotype: protein_coding
description:
  Nucleotide pyrophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0121080
symbol: KFX67709.1
gene_biotype: protein_coding
description:
  4'-phosphopantetheinyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the P-Pant transferase superfamily.


ensembl_gene_id: TMS3_0121115
symbol: KFX67716.1
gene_biotype: protein_coding
description:
  Cytochrome C; Electron transfer subunit of the periplasmic nitrate reductase complex NapAB; Belongs to the NapB family.


ensembl_gene_id: TMS3_0121120
symbol: napA
gene_biotype: protein_coding
description:
  Nitrate reductase; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite.


ensembl_gene_id: TMS3_0121125
symbol: napD
gene_biotype: protein_coding
description:
  Glutamate synthase; Chaperone for NapA, the catalytic subunit of the periplasmic nitrate reductase. It binds directly and specifically to the twin- arginine signal peptide of NapA, preventing premature interaction with the Tat translocase and premature export.


ensembl_gene_id: TMS3_0121150
symbol: KFX67723.1
gene_biotype: protein_coding
description:
  AMP-dependent synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0121155
symbol: KFX67724.1
gene_biotype: protein_coding
description:
  Carnitine dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CoA-transferase III family.


ensembl_gene_id: TMS3_0121185
symbol: KFX67730.1
gene_biotype: protein_coding
description:
  sprT; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SprT family.


ensembl_gene_id: TMS3_0121200
symbol: ttcA
gene_biotype: protein_coding
description:
  tRNA 2-thiocytidine biosynthesis protein TtcA; Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine/cysteine desulfurase (IscS) system.


ensembl_gene_id: TMS3_0121210
symbol: KFX67735.1
gene_biotype: protein_coding
description:
  NAD-dependent deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0121215
symbol: KFX67736.1
gene_biotype: protein_coding
description:
  Peptidase P60; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0121245
symbol: KFX67742.1
gene_biotype: protein_coding
description:
  Cobalamin ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0121250
symbol: KFX67743.1
gene_biotype: protein_coding
description:
  Cob(I)yrinic acid a,c-diamide adenosyltransferase; Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids.


ensembl_gene_id: TMS3_0121255
symbol: cobB
gene_biotype: protein_coding
description:
  Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of hydrogenobyrinate, using either L- glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.


ensembl_gene_id: TMS3_0121260
symbol: KFX67745.1
gene_biotype: protein_coding
description:
  cob(II)yrinic acid a,c-diamide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0121265
symbol: cobD
gene_biotype: protein_coding
description:
  Cobalamin biosynthesis protein CobD; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.


ensembl_gene_id: TMS3_0121270
symbol: KFX67747.1
gene_biotype: protein_coding
description:
  Threonine-phosphate decarboxylase; Cobalamin biosynthesis protein; decarboxylates L-threonine-O-3-phosphate to yield (R)-1-amino-2-propanol O-2-phosphate, the precursor for the linkage between the nucleotide loop and the corrin ring in cobalamin; structurally similar to histidinol phosphate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0121275
symbol: cobQ
gene_biotype: protein_coding
description:
  Cobyric acid synthase; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.


ensembl_gene_id: TMS3_0121280
symbol: KFX67749.1
gene_biotype: protein_coding
description:
  Adenosylcobinamide kinase; Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate.


ensembl_gene_id: TMS3_0121285
symbol: cobT
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB).


ensembl_gene_id: TMS3_0121290
symbol: KFX67751.1
gene_biotype: protein_coding
description:
  Alpha-ribazole phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0121295
symbol: cobS
gene_biotype: protein_coding
description:
  Cobalamin synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.


ensembl_gene_id: TMS3_0121310
symbol: KFX67754.1
gene_biotype: protein_coding
description:
  Major pilin protein fimA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0121315
symbol: KFX67755.1
gene_biotype: protein_coding
description:
  Acetylornithine deacetylase; Catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0121350
symbol: KFX67762.1
gene_biotype: protein_coding
description:
  Isomerase YbhH; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0121365
symbol: KFX67764.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aspartate/glutamate racemases family.


ensembl_gene_id: TMS3_0121440
symbol: KFX67775.1
gene_biotype: protein_coding
description:
  Long-chain fatty acid transport protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0121450
symbol: KFX67777.1
gene_biotype: protein_coding
description:
  3-mercaptopyruvate sulfurtransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0121460
symbol: KFX67779.1
gene_biotype: protein_coding
description:
  Divalent cation transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0121465
symbol: KFX67780.1
gene_biotype: protein_coding
description:
  Parallel beta-helix repeat-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0121485
symbol: rnd
gene_biotype: protein_coding
description:
  Ribonuclease D; Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides; Belongs to the RNase D family.


ensembl_gene_id: TMS3_0121490
symbol: KFX67785.1
gene_biotype: protein_coding
description:
  YcgL domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0121495
symbol: KFX67786.1
gene_biotype: protein_coding
description:
  2-hydroxyacid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0121500
symbol: KFX67787.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0260 family.


ensembl_gene_id: TMS3_0121520
symbol: KFX67791.1
gene_biotype: protein_coding
description:
  23S rRNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0121540
symbol: KFX67795.1
gene_biotype: protein_coding
description:
  Peptidase S9; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0121580
symbol: KFX67803.1
gene_biotype: protein_coding
description:
  Ribulose-5-phosphate 3-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0121590
symbol: KFX67805.1
gene_biotype: protein_coding
description:
  Protein involved in outer membrane biogenesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0121615
symbol: KFX67809.1
gene_biotype: protein_coding
description:
  Multidrug DMT transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0121620
symbol: aceK
gene_biotype: protein_coding
description:
  Isocitrate dehydrogenase; Bifunctional enzyme which can phosphorylate or dephosphorylate isocitrate dehydrogenase (IDH) on a specific serine residue. This is a regulatory mechanism which enables bacteria to bypass the Krebs cycle via the glyoxylate shunt in response to the source of carbon. When bacteria are grown on glucose, IDH is fully active and unphosphorylated, but when grown on acetate or ethanol, the activity of IDH declines drastically concomitant with its phosphorylation.


ensembl_gene_id: TMS3_0121635
symbol: KFX67812.1
gene_biotype: protein_coding
description:
  Allantoin permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the purine-cytosine permease (2.A.39) family.


ensembl_gene_id: TMS3_0121650
symbol: KFX67815.1
gene_biotype: protein_coding
description:
  Agmatinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the arginase family.


ensembl_gene_id: TMS3_0121695
symbol: KFX67823.1
gene_biotype: protein_coding
description:
  DTW domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0121700
symbol: KFX67824.1
gene_biotype: protein_coding
description:
  Hemolysin secretion protein D; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0121765
symbol: KFX67837.1
gene_biotype: protein_coding
description:
  EmrB/QacA subfamily drug resistance transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the major facilitator superfamily.


ensembl_gene_id: TMS3_0121775
symbol: KFX67839.1
gene_biotype: protein_coding
description:
  Selenoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0121785
symbol: KFX67841.1
gene_biotype: protein_coding
description:
  tRNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0121800
symbol: KFX67844.1
gene_biotype: protein_coding
description:
  GDP-mannose-dependent alpha-mannosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0121825
symbol: KFX67849.1
gene_biotype: protein_coding
description:
  Potassium transporter TrkH; Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA; Belongs to the TrkH potassium transport family.


ensembl_gene_id: TMS3_0121865
symbol: KFX67857.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Unknown function; YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase, but does not seem to catalyze any of the predicted reactions based on sequence and structure similarity; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0121875
symbol: KFX67859.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SUA5 family.


ensembl_gene_id: TMS3_0121885
symbol: KFX67861.1
gene_biotype: protein_coding
description:
  tryptophan--tRNA ligase; Catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: TMS3_0121890
symbol: KFX67862.1
gene_biotype: protein_coding
description:
  Chromosome segregation protein ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: TMS3_0121895
symbol: KFX67863.1
gene_biotype: protein_coding
description:
  Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: TMS3_0121915
symbol: KFX67867.1
gene_biotype: protein_coding
description:
  Phosphoglycolate phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0121920
symbol: ubiG
gene_biotype: protein_coding
description:
  3-demethylubiquinone-9 3-methyltransferase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family.


ensembl_gene_id: TMS3_0121925
symbol: mtaD
gene_biotype: protein_coding
description:
  N-ethylammeline chlorohydrolase; Catalyzes the deamination of 5-methylthioadenosine and S- adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine. Belongs to the metallo-dependent hydrolases superfamily. MTA/SAH deaminase family.


ensembl_gene_id: TMS3_0121930
symbol: mtnA
gene_biotype: protein_coding
description:
  Methylthioribose-1-phosphate isomerase; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P).


ensembl_gene_id: TMS3_0121935
symbol: gyrA
gene_biotype: protein_coding
description:
  DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: TMS3_0121940
symbol: serC
gene_biotype: protein_coding
description:
  MFS transporter; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily.


ensembl_gene_id: TMS3_0121945
symbol: KFX67873.1
gene_biotype: protein_coding
description:
  Prephenate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0121950
symbol: hisC-2
gene_biotype: protein_coding
description:
  Aspartate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.


ensembl_gene_id: TMS3_0121955
symbol: aroA
gene_biotype: protein_coding
description:
  3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.


ensembl_gene_id: TMS3_0121960
symbol: cmk
gene_biotype: protein_coding
description:
  Cytidylate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0121965
symbol: rpsA
gene_biotype: protein_coding
description:
  30S ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence.


ensembl_gene_id: TMS3_0121970
symbol: ihfB
gene_biotype: protein_coding
description:
  Integration host factor subunit beta; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family.


ensembl_gene_id: TMS3_0122050
symbol: mobA
gene_biotype: protein_coding
description:
  Molybdopterin-guanine dinucleotide biosynthesis protein A; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor; Belongs to the MobA family.


ensembl_gene_id: TMS3_0122055
symbol: KFX67891.1
gene_biotype: protein_coding
description:
  Molybdopterin biosynthesis protein B; May be involved in the biosynthesis of molybdopterin. Belongs to the MoaB/Mog family.


ensembl_gene_id: TMS3_0122060
symbol: KFX67892.1
gene_biotype: protein_coding
description:
  Molybdenum cofactor biosynthesis protein MoaA; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.


ensembl_gene_id: TMS3_0122080
symbol: KFX67896.1
gene_biotype: protein_coding
description:
  Carbohydrate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0122090
symbol: KFX67898.1
gene_biotype: protein_coding
description:
  Lipid kinase; Probably phosphorylates lipids; the in vivo substrate is unknown; Belongs to the diacylglycerol/lipid kinase family. YegS lipid kinase subfamily.


ensembl_gene_id: TMS3_0122115
symbol: KFX67903.1
gene_biotype: protein_coding
description:
  ABC transporter ATPase; Uup; in Escherichia coli this cytoplasmic protein was shown to contain ATPase activity; mutations in this gene affect RecA-independent excision of transposons and affects Mu bacteriophage growth; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0122135
symbol: KFX67907.1
gene_biotype: protein_coding
description:
  F0F1-type ATP synthase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0122140
symbol: fadB
gene_biotype: protein_coding
description:
  Multifunctional fatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family.


ensembl_gene_id: TMS3_0122145
symbol: fadA
gene_biotype: protein_coding
description:
  3-ketoacyl-CoA thiolase; Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed.


ensembl_gene_id: TMS3_0122150
symbol: KFX67910.1
gene_biotype: protein_coding
description:
  TonB box-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0122160
symbol: KFX67912.1
gene_biotype: protein_coding
description:
  PasA protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0122170
symbol: KFX67914.1
gene_biotype: protein_coding
description:
  Cell division inhibitor SulA; Component of the SOS system and an inhibitor of cell division. Accumulation of SulA causes rapid cessation of cell division and the appearance of long, non-septate filaments. In the presence of GTP, binds a polymerization-competent form of FtsZ in a 1:1 ratio, thus inhibiting FtsZ polymerization and therefore preventing it from participating in the assembly of the Z ring. This mechanism prevents the premature segregation of damaged DNA to daughter cells during cell division.


ensembl_gene_id: TMS3_0122175
symbol: lexA
gene_biotype: protein_coding
description:
  LexA family transcriptional regulator; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair.


ensembl_gene_id: TMS3_0122190
symbol: nagZ
gene_biotype: protein_coding
description:
  Beta-hexosaminidase; Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide- linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N- acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides. Belongs to the glycosyl hydrolase 3 family. NagZ subfamily.


ensembl_gene_id: TMS3_0122195
symbol: KFX67919.1
gene_biotype: protein_coding
description:
  5'-methylthioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioinosine (MTI) to hypoxanthine and 5-methylthioribose-1-phosphate. Involved in the breakdown of S-methyl-5'-thioadenosine (MTA), a major by-product of polyamine biosynthesis. Catabolism of (MTA) occurs via deamination to MTI and phosphorolysis to hypoxanthine.


ensembl_gene_id: TMS3_0122205
symbol: mfd
gene_biotype: protein_coding
description:
  Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.


ensembl_gene_id: TMS3_0122210
symbol: KFX67922.1
gene_biotype: protein_coding
description:
  Glyceraldehyde-3-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: TMS3_0122215
symbol: nqrA
gene_biotype: protein_coding
description:
  Na(+)-translocating NADH-quinone reductase subunit A; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol.


ensembl_gene_id: TMS3_0122220
symbol: nqrB
gene_biotype: protein_coding
description:
  Na(+)-translocating NADH-quinone reductase subunit B; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol.


ensembl_gene_id: TMS3_0122225
symbol: nqrC
gene_biotype: protein_coding
description:
  Na(+)-translocating NADH-quinone reductase subunit C; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol.


ensembl_gene_id: TMS3_0122230
symbol: nqrD
gene_biotype: protein_coding
description:
  Na(+)-translocating NADH-quinone reductase subunit D; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol; Belongs to the NqrDE/RnfAE family.


ensembl_gene_id: TMS3_0122235
symbol: nqrE
gene_biotype: protein_coding
description:
  Na(+)-translocating NADH-quinone reductase subunit E; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol; Belongs to the NqrDE/RnfAE family.


ensembl_gene_id: TMS3_0122240
symbol: nqrF
gene_biotype: protein_coding
description:
  Na(+)-translocating NADH-quinone reductase subunit F; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. The first step is catalyzed by NqrF, which accepts electrons from NADH and reduces ubiquinone-1 to ubisemiquinone by a one-electron transfer pathway.


ensembl_gene_id: TMS3_0122245
symbol: KFX67929.1
gene_biotype: protein_coding
description:
  Thiamine biosynthesis protein ApbE; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family.


ensembl_gene_id: TMS3_0122250
symbol: KFX67930.1
gene_biotype: protein_coding
description:
  ApbE family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0122255
symbol: sthA
gene_biotype: protein_coding
description:
  Pyridine nucleotide-disulfide oxidoreductase; Conversion of NADPH, generated by peripheral catabolic pathways, to NADH, which can enter the respiratory chain for energy generation; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.


ensembl_gene_id: TMS3_0122275
symbol: KFX67935.1
gene_biotype: protein_coding
description:
  Cell division protein FtsX; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0122280
symbol: lolD
gene_biotype: protein_coding
description:
  ABC transporter; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner.


ensembl_gene_id: TMS3_0122285
symbol: KFX67937.1
gene_biotype: protein_coding
description:
  Multidrug ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0122295
symbol: KFX67939.1
gene_biotype: protein_coding
description:
  Competence protein ComEC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0122300
symbol: KFX67940.1
gene_biotype: protein_coding
description:
  Biopolymer transporter ExbB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0122305
symbol: KFX67941.1
gene_biotype: protein_coding
description:
  Biopolymer transporter ExbD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0122310
symbol: lpxK
gene_biotype: protein_coding
description:
  Tetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).


ensembl_gene_id: TMS3_0122315
symbol: KFX67943.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0434 family.


ensembl_gene_id: TMS3_0122320
symbol: kdsB
gene_biotype: protein_coding
description:
  3-deoxy-manno-octulosonate cytidylyltransferase; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria.


ensembl_gene_id: TMS3_0122325
symbol: KFX67945.1
gene_biotype: protein_coding
description:
  Protein tyrosine phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.


ensembl_gene_id: TMS3_0122345
symbol: rne
gene_biotype: protein_coding
description:
  Ribonuclease E; Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs. Belongs to the RNase E/G family. RNase E subfamily.


ensembl_gene_id: TMS3_0122350
symbol: KFX67950.1
gene_biotype: protein_coding
description:
  23S rRNA pseudouridylate synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: TMS3_0122360
symbol: KFX67952.1
gene_biotype: protein_coding
description:
  Peptidase S49; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0122365
symbol: KFX67953.1
gene_biotype: protein_coding
description:
  Septum formation inhibitor Maf; Nucleoside triphosphate pyrophosphatase that hydrolyzes 7- methyl-GTP (m(7)GTP). May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids; Belongs to the Maf family. YceF subfamily.


ensembl_gene_id: TMS3_0122375
symbol: rpmF
gene_biotype: protein_coding
description:
  Some L32 proteins have zinc finger motifs consisting of CXXC while others do not; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL32 family.


ensembl_gene_id: TMS3_0122380
symbol: plsX
gene_biotype: protein_coding
description:
  Phosphate acyltransferase; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.


ensembl_gene_id: TMS3_0122385
symbol: KFX67957.1
gene_biotype: protein_coding
description:
  Malonyl CoA-ACP transacylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0122390
symbol: fabG-4
gene_biotype: protein_coding
description:
  3-ketoacyl-ACP reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: TMS3_0122400
symbol: KFX67960.1
gene_biotype: protein_coding
description:
  3-oxoacyl-ACP synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.


ensembl_gene_id: TMS3_0122405
symbol: KFX67961.1
gene_biotype: protein_coding
description:
  4-amino-4-deoxychorismate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0122410
symbol: mltG
gene_biotype: protein_coding
description:
  Aminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation.


ensembl_gene_id: TMS3_0122415
symbol: tmk
gene_biotype: protein_coding
description:
  Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.


ensembl_gene_id: TMS3_0122420
symbol: KFX67964.1
gene_biotype: protein_coding
description:
  DNA polymerase III subunit delta; Catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0122445
symbol: KFX67969.1
gene_biotype: protein_coding
description:
  Radical SAM protein; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.


ensembl_gene_id: TMS3_0122455
symbol: KFX67971.1
gene_biotype: protein_coding
description:
  Proteophosphoglycan precursor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0122465
symbol: KFX67973.1
gene_biotype: protein_coding
description:
  Electron transporter RnfB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0122505
symbol: KFX67981.1
gene_biotype: protein_coding
description:
  Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: TMS3_0122545
symbol: KFX67988.1
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0122550
symbol: KFX67989.1
gene_biotype: protein_coding
description:
  2,4-dienoyl-CoA reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0122555
symbol: KFX67990.1
gene_biotype: protein_coding
description:
  Terpene utilization protein AtuA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0122590
symbol: KFX67996.1
gene_biotype: protein_coding
description:
  Phospho-2-dehydro-3-deoxyheptonate aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0122595
symbol: KFX67997.1
gene_biotype: protein_coding
description:
  Spermidine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0122605
symbol: deaD
gene_biotype: protein_coding
description:
  RNA helicase; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation.


ensembl_gene_id: TMS3_0122610
symbol: KFX68000.1
gene_biotype: protein_coding
description:
  Aromatic ring-opening dioxygenase LigB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0122615
symbol: tpm
gene_biotype: protein_coding
description:
  Thiopurine S-methyltransferase; Catalyzes the S-adenosylmethionine-dependent transmethylation of thiopurine compounds; may be involved in selenium cycling by forming dimethylselenide and/or dimethyldiselenide; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class I-like SAM-binding methyltransferase superfamily. TPMT family.


ensembl_gene_id: TMS3_0122625
symbol: htpX
gene_biotype: protein_coding
description:
  Protease HtpX; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase M48B family.


ensembl_gene_id: TMS3_0122635
symbol: KFX68005.1
gene_biotype: protein_coding
description:
  Aminotransferase; Broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0122640
symbol: msrB
gene_biotype: protein_coding
description:
  Methionine sulfoxide reductase B; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MsrB Met sulfoxide reductase family.


ensembl_gene_id: TMS3_0122665
symbol: KFX68011.1
gene_biotype: protein_coding
description:
  GAF domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0122705
symbol: fadE
gene_biotype: protein_coding
description:
  acyl-CoA dehydrogenase; Functions in fatty acid oxidation; converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0122710
symbol: KFX68016.1
gene_biotype: protein_coding
description:
  Cysteine protease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0122745
symbol: KFX68022.1
gene_biotype: protein_coding
description:
  NADP-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0122815
symbol: KFX68033.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Oxygen-binding protein. May be involved in a storage mechanism or for delivery to oxygen-requiring enzymes. The oxygen- binding site contains two iron atoms; Belongs to the hemerythrin family.


ensembl_gene_id: TMS3_0122825
symbol: KFX68035.1
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0122850
symbol: prmB
gene_biotype: protein_coding
description:
  SAM-dependent methyltransferase; Specifically methylates the 50S ribosomal protein L3 on a specific glutamine residue; Belongs to the protein N5-glutamine methyltransferase family. PrmB subfamily.


ensembl_gene_id: TMS3_0122865
symbol: aroC
gene_biotype: protein_coding
description:
  Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.


ensembl_gene_id: TMS3_0122875
symbol: mtnB
gene_biotype: protein_coding
description:
  Methylthioribulose-1-phosphate dehydratase; Catalyzes the dehydration of methylthioribulose-1-phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P). Belongs to the aldolase class II family. MtnB subfamily.


ensembl_gene_id: TMS3_0122880
symbol: mtnD
gene_biotype: protein_coding
description:
  Acireductone dioxygenase; Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway.


ensembl_gene_id: TMS3_0122885
symbol: mtnC
gene_biotype: protein_coding
description:
  Haloacid dehalogenase; Bifunctional enzyme that catalyzes the enolization of 2,3- diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P) into the intermediate 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate (HK- MTPenyl-1-P), which is then dephosphorylated to form the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene). Belongs to the HAD-like hydrolase superfamily. MasA/MtnC family.


ensembl_gene_id: TMS3_0122895
symbol: KFX68048.1
gene_biotype: protein_coding
description:
  Fructose-2,6-bisphosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0122900
symbol: KFX68049.1
gene_biotype: protein_coding
description:
  Cysteine methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated.


ensembl_gene_id: TMS3_0122905
symbol: KFX68050.1
gene_biotype: protein_coding
description:
  DNA-3-methyladenine glycosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0122910
symbol: speE
gene_biotype: protein_coding
description:
  Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.


ensembl_gene_id: TMS3_0122925
symbol: KFX68054.1
gene_biotype: protein_coding
description:
  Cystathionine beta-synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0122930
symbol: KFX68055.1
gene_biotype: protein_coding
description:
  Cystathionine beta-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0122960
symbol: KFX68060.1
gene_biotype: protein_coding
description:
  4-hydroxyacetophenone monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0122965
symbol: KFX68061.1
gene_biotype: protein_coding
description:
  Proton-motive-force-driven choline transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the BCCT transporter (TC 2.A.15) family.


ensembl_gene_id: TMS3_0122985
symbol: KFX68065.1
gene_biotype: protein_coding
description:
  Superfamily II DNA/RNA helicase, SNF2 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0123015
symbol: KFX68070.1
gene_biotype: protein_coding
description:
  3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0123040
symbol: KFX68073.1
gene_biotype: protein_coding
description:
  Amidotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0123045
symbol: KFX68074.1
gene_biotype: protein_coding
description:
  Acyl-phosphate glycerol 3-phosphate acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.


ensembl_gene_id: TMS3_0123085
symbol: efp
gene_biotype: protein_coding
description:
  Elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.


ensembl_gene_id: TMS3_0123110
symbol: KFX68085.1
gene_biotype: protein_coding
description:
  Phenazine biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0123120
symbol: pyrF
gene_biotype: protein_coding
description:
  Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily.


ensembl_gene_id: TMS3_0123125
symbol: queF
gene_biotype: protein_coding
description:
  NADPH-dependent 7-cyano-7-deazaguanine reductase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1).


ensembl_gene_id: TMS3_0123135
symbol: KFX68090.1
gene_biotype: protein_coding
description:
  Phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0123145
symbol: KFX67473.1
gene_biotype: protein_coding
description:
  Copper resistance protein CopZ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0123155
symbol: KFX67475.1
gene_biotype: protein_coding
description:
  Metal ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0123170
symbol: KFX67478.1
gene_biotype: protein_coding
description:
  palmitoyl-CoA hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0123175
symbol: KFX67479.1
gene_biotype: protein_coding
description:
  SagB-type dehydrogenase domain protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0123185
symbol: KFX67481.1
gene_biotype: protein_coding
description:
  Histone deacetylase superfamily protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0123190
symbol: KFX67482.1
gene_biotype: protein_coding
description:
  NAD(FAD)-utilizing dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0123195
symbol: KFX67483.1
gene_biotype: protein_coding
description:
  Chemotaxis protein CheC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0123205
symbol: KFX67485.1
gene_biotype: protein_coding
description:
  DEAD/DEAH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DEAD box helicase family.


ensembl_gene_id: TMS3_0123215
symbol: KFX67487.1
gene_biotype: protein_coding
description:
  Methanol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0123225
symbol: KFX67489.1
gene_biotype: protein_coding
description:
  Mechanosensitive ion channel protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0123270
symbol: KFX67498.1
gene_biotype: protein_coding
description:
  Bifunctional lytic transglycosylase/amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0123280
symbol: KFX67500.1
gene_biotype: protein_coding
description:
  Polyribonucleotide nucleotidyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0123290
symbol: fieF
gene_biotype: protein_coding
description:
  Ferrous iron transporter; Member of cation diffusion facilitator family; CDF; membrane-bound; induced by both zinc and iron, but does not induce resistance to zinc; can transport zinc(II) in a proton-dependent manner; instead this protein induces iron resistance; forms dimers; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.


ensembl_gene_id: TMS3_0123315
symbol: amn
gene_biotype: protein_coding
description:
  AMP nucleosidase; Catalyzes the hydrolysis of the N-glycosidic bond of AMP to form adenine and ribose 5-phosphate. Involved in regulation of AMP concentrations.


ensembl_gene_id: TMS3_0123335
symbol: KFX67511.1
gene_biotype: protein_coding
description:
  Hydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0123340
symbol: thiE
gene_biotype: protein_coding
description:
  Thiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.


ensembl_gene_id: TMS3_0123345
symbol: hemL
gene_biotype: protein_coding
description:
  Glutamate-1-semialdehyde 2,1-aminomutase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0123365
symbol: miaB
gene_biotype: protein_coding
description:
  (dimethylallyl)adenosine tRNA methylthiotransferase; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.


ensembl_gene_id: TMS3_0123375
symbol: ybeY
gene_biotype: protein_coding
description:
  rRNA maturation factor; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.


ensembl_gene_id: TMS3_0123380
symbol: KFX67519.1
gene_biotype: protein_coding
description:
  Magnesium transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0123385
symbol: lnt
gene_biotype: protein_coding
description:
  Acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily.


ensembl_gene_id: TMS3_0123400
symbol: leuS
gene_biotype: protein_coding
description:
  leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; Derived by automated computational  [...]


ensembl_gene_id: TMS3_0123405
symbol: lptE
gene_biotype: protein_coding
description:
  Lipoprotein; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane.


ensembl_gene_id: TMS3_0123415
symbol: KFX67526.1
gene_biotype: protein_coding
description:
  Lipoyl synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0123420
symbol: KFX67527.1
gene_biotype: protein_coding
description:
  Murein transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0123430
symbol: lipA-2
gene_biotype: protein_coding
description:
  Radical SAM protein; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.


ensembl_gene_id: TMS3_0123435
symbol: lipB
gene_biotype: protein_coding
description:
  Lipoate--protein ligase; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate.


ensembl_gene_id: TMS3_0123440
symbol: KFX67530.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0250 family.


ensembl_gene_id: TMS3_0123445
symbol: KFX67531.1
gene_biotype: protein_coding
description:
  D-alanyl-D-alanine carboxypeptidase; Penicillin-binding protein 5; removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S11 family.


ensembl_gene_id: TMS3_0123460
symbol: mrdB
gene_biotype: protein_coding
description:
  Rod shape-determining protein RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.


ensembl_gene_id: TMS3_0123465
symbol: mrdA
gene_biotype: protein_coding
description:
  Penicillin-binding protein 2; Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily.


ensembl_gene_id: TMS3_0123470
symbol: rlmH
gene_biotype: protein_coding
description:
  50S rRNA methyltransferase; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.


ensembl_gene_id: TMS3_0123475
symbol: rsfS
gene_biotype: protein_coding
description:
  Iojap family protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.


ensembl_gene_id: TMS3_0123480
symbol: nadD
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).


ensembl_gene_id: TMS3_0123485
symbol: proA
gene_biotype: protein_coding
description:
  Gamma-glutamyl phosphate reductase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.


ensembl_gene_id: TMS3_0123490
symbol: KFX67540.1
gene_biotype: protein_coding
description:
  3-methyladenine DNA glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DNA glycosylase MPG family.


ensembl_gene_id: TMS3_0123510
symbol: KFX67544.1
gene_biotype: protein_coding
description:
  Murein hydrolase transporter LrgA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0123515
symbol: KFX67545.1
gene_biotype: protein_coding
description:
  Dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0123520
symbol: KFX67546.1
gene_biotype: protein_coding
description:
  Peptidase C13; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0123525
symbol: KFX67547.1
gene_biotype: protein_coding
description:
  Nucleoside-diphosphate sugar epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0123535
symbol: KFX67549.1
gene_biotype: protein_coding
description:
  Phospholipid methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0123555
symbol: ubiX
gene_biotype: protein_coding
description:
  Aromatic acid decarboxylase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.


ensembl_gene_id: TMS3_0123560
symbol: mpl
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase; Reutilizes the intact tripeptide L-alanyl-gamma-D-glutamyl- meso-diaminopimelate by linking it to UDP-N-acetylmuramate. Belongs to the MurCDEF family. Mpl subfamily.


ensembl_gene_id: TMS3_0123580
symbol: KFX67556.1
gene_biotype: protein_coding
description:
  Ethanolamine ammonia-lyase; With EutC catalyzes the formation of acetaldehyde and ammonia from ethanolamine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0123600
symbol: KFX67559.1
gene_biotype: protein_coding
description:
  Zinc-dependent peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MtfA family.


ensembl_gene_id: TMS3_0123605
symbol: ppa
gene_biotype: protein_coding
description:
  Inorganic pyrophosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.


ensembl_gene_id: TMS3_0123635
symbol: xseB
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.


ensembl_gene_id: TMS3_0123640
symbol: KFX67567.1
gene_biotype: protein_coding
description:
  Geranyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FPP/GGPP synthase family.


ensembl_gene_id: TMS3_0123650
symbol: dxs
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.


ensembl_gene_id: TMS3_0123660
symbol: KFX67570.1
gene_biotype: protein_coding
description:
  Iron-hydroxamate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0123670
symbol: ribA
gene_biotype: protein_coding
description:
  GTP cyclohydrolase; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family.


ensembl_gene_id: TMS3_0123685
symbol: KFX67575.1
gene_biotype: protein_coding
description:
  Phosphatidylglycerophosphatase; Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG).


ensembl_gene_id: TMS3_0123690
symbol: thiL
gene_biotype: protein_coding
description:
  Thiamine monophosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family.


ensembl_gene_id: TMS3_0123695
symbol: nusB
gene_biotype: protein_coding
description:
  Antitermination protein NusB; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.


ensembl_gene_id: TMS3_0123700
symbol: ribH
gene_biotype: protein_coding
description:
  6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin; Belongs to the DMRL synthase family.


ensembl_gene_id: TMS3_0123710
symbol: KFX67580.1
gene_biotype: protein_coding
description:
  Riboflavin synthase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0123715
symbol: KFX67581.1
gene_biotype: protein_coding
description:
  Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.


ensembl_gene_id: TMS3_0123720
symbol: nrdR
gene_biotype: protein_coding
description:
  NrdR family transcriptional regulator; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family.


ensembl_gene_id: TMS3_0123750
symbol: KFX67588.1
gene_biotype: protein_coding
description:
  Methionine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0123770
symbol: KFX67592.1
gene_biotype: protein_coding
description:
  Energy transducer TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.


ensembl_gene_id: TMS3_0123845
symbol: KFX67607.1
gene_biotype: protein_coding
description:
  Single-stranded DNA-binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.


ensembl_gene_id: TMS3_0123855
symbol: uvrA
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.


ensembl_gene_id: TMS3_0123865
symbol: katG
gene_biotype: protein_coding
description:
  Hydroperoxidase; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily.


ensembl_gene_id: TMS3_0123875
symbol: rplQ
gene_biotype: protein_coding
description:
  50S ribosomal protein L17; Is a component of the macrolide binding site in the peptidyl transferase center; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0123880
symbol: rpoA
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: TMS3_0123885
symbol: rpsD
gene_biotype: protein_coding
description:
  30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.


ensembl_gene_id: TMS3_0123890
symbol: rpsK
gene_biotype: protein_coding
description:
  30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.


ensembl_gene_id: TMS3_0123895
symbol: rpsM
gene_biotype: protein_coding
description:
  30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.


ensembl_gene_id: TMS3_0123900
symbol: secY
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.


ensembl_gene_id: TMS3_0123905
symbol: rplO
gene_biotype: protein_coding
description:
  50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.


ensembl_gene_id: TMS3_0123910
symbol: rpmD
gene_biotype: protein_coding
description:
  50S ribosomal protein L30; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0123915
symbol: rpsE
gene_biotype: protein_coding
description:
  30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.


ensembl_gene_id: TMS3_0123920
symbol: rplR
gene_biotype: protein_coding
description:
  50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.


ensembl_gene_id: TMS3_0123925
symbol: rplF
gene_biotype: protein_coding
description:
  50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.


ensembl_gene_id: TMS3_0123930
symbol: rpsH
gene_biotype: protein_coding
description:
  30S ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.


ensembl_gene_id: TMS3_0123935
symbol: rpsN
gene_biotype: protein_coding
description:
  30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.


ensembl_gene_id: TMS3_0123940
symbol: rplE
gene_biotype: protein_coding
description:
  50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.


ensembl_gene_id: TMS3_0123945
symbol: rplX
gene_biotype: protein_coding
description:
  50S ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.


ensembl_gene_id: TMS3_0123950
symbol: rplN
gene_biotype: protein_coding
description:
  50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.


ensembl_gene_id: TMS3_0123955
symbol: rpsQ
gene_biotype: protein_coding
description:
  30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.


ensembl_gene_id: TMS3_0123960
symbol: rpmC
gene_biotype: protein_coding
description:
  50S ribosomal protein L29; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uL29 family.


ensembl_gene_id: TMS3_0123965
symbol: rplP
gene_biotype: protein_coding
description:
  50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.


ensembl_gene_id: TMS3_0123970
symbol: rpsC
gene_biotype: protein_coding
description:
  30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.


ensembl_gene_id: TMS3_0123975
symbol: rplV
gene_biotype: protein_coding
description:
  50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.


ensembl_gene_id: TMS3_0123980
symbol: rpsS
gene_biotype: protein_coding
description:
  30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.


ensembl_gene_id: TMS3_0123985
symbol: rplB
gene_biotype: protein_coding
description:
  50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.


ensembl_gene_id: TMS3_0123990
symbol: rplW
gene_biotype: protein_coding
description:
  50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.


ensembl_gene_id: TMS3_0124000
symbol: rplC
gene_biotype: protein_coding
description:
  50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.


ensembl_gene_id: TMS3_0124005
symbol: rpsJ
gene_biotype: protein_coding
description:
  30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.


ensembl_gene_id: TMS3_0124010
symbol: tuf
gene_biotype: protein_coding
description:
  Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.


ensembl_gene_id: TMS3_0124015
symbol: fusA-2
gene_biotype: protein_coding
description:
  Elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.


ensembl_gene_id: TMS3_0124020
symbol: rpsG
gene_biotype: protein_coding
description:
  30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.


ensembl_gene_id: TMS3_0124025
symbol: rpsL
gene_biotype: protein_coding
description:
  30S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.


ensembl_gene_id: TMS3_0124030
symbol: rpoC
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: TMS3_0124040
symbol: rplL
gene_biotype: protein_coding
description:
  50S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.


ensembl_gene_id: TMS3_0124045
symbol: rplJ
gene_biotype: protein_coding
description:
  50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.


ensembl_gene_id: TMS3_0124050
symbol: rplA
gene_biotype: protein_coding
description:
  50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.


ensembl_gene_id: TMS3_0124055
symbol: rplK
gene_biotype: protein_coding
description:
  50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.


ensembl_gene_id: TMS3_0124060
symbol: nusG
gene_biotype: protein_coding
description:
  Antitermination protein NusG; Participates in transcription elongation, termination and antitermination.


ensembl_gene_id: TMS3_0124065
symbol: secE
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation; Belongs to the SecE/SEC61-gamma family.


ensembl_gene_id: TMS3_0124095
symbol: KFX67653.1
gene_biotype: protein_coding
description:
  Sporulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0124100
symbol: coaX
gene_biotype: protein_coding
description:
  Pantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.


ensembl_gene_id: TMS3_0124105
symbol: birA
gene_biotype: protein_coding
description:
  Biotin--protein ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio-5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon.


ensembl_gene_id: TMS3_0124145
symbol: KFX67416.1
gene_biotype: protein_coding
description:
  Conjugal transfer protein TrbB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0124150
symbol: KFX67417.1
gene_biotype: protein_coding
description:
  Conjugal transfer protein TrbC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0124155
symbol: KFX67418.1
gene_biotype: protein_coding
description:
  Conjugal transfer protein TrbD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0124160
symbol: KFX67419.1
gene_biotype: protein_coding
description:
  Conjugal transfer protein TrbE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0124165
symbol: KFX67420.1
gene_biotype: protein_coding
description:
  Conjugal transfer protein TrbJ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0124175
symbol: KFX67422.1
gene_biotype: protein_coding
description:
  Conjugal transfer protein TrbL; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0124180
symbol: KFX67423.1
gene_biotype: protein_coding
description:
  Conjugal transfer protein TrbF; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0124185
symbol: KFX67424.1
gene_biotype: protein_coding
description:
  Conjugal transfer protein TrbG; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0124190
symbol: KFX67425.1
gene_biotype: protein_coding
description:
  Conjugal transfer protein TrbI; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0124205
symbol: KFX67427.1
gene_biotype: protein_coding
description:
  Zeta toxin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0124250
symbol: ihfA
gene_biotype: protein_coding
description:
  Integration host factor subunit alpha; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family.


ensembl_gene_id: TMS3_0124255
symbol: pheT
gene_biotype: protein_coding
description:
  phenylalanyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.


ensembl_gene_id: TMS3_0124260
symbol: pheS
gene_biotype: protein_coding
description:
  phenylalanyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.


ensembl_gene_id: TMS3_0124265
symbol: rplT
gene_biotype: protein_coding
description:
  50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.


ensembl_gene_id: TMS3_0124270
symbol: rpmI
gene_biotype: protein_coding
description:
  50S ribosomal protein L35; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL35 family.


ensembl_gene_id: TMS3_0124275
symbol: infC
gene_biotype: protein_coding
description:
  Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.


ensembl_gene_id: TMS3_0124280
symbol: thrS
gene_biotype: protein_coding
description:
  threonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr).


ensembl_gene_id: TMS3_0124290
symbol: KFX67440.1
gene_biotype: protein_coding
description:
  Gamma-glutamylputrescine oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0124320
symbol: pqqE
gene_biotype: protein_coding
description:
  Pyrroloquinoline quinone biosynthesis protein PqqE; Catalyzes the cross-linking of a glutamate residue and a tyrosine residue in the PqqA protein as part of the biosynthesis of pyrroloquinoline quinone (PQQ).


ensembl_gene_id: TMS3_0124325
symbol: pqqD
gene_biotype: protein_coding
description:
  Pyrroloquinoline quinone biosynthesis protein PqqD; Functions as a PqqA binding protein and presents PqqA to PqqE, in the pyrroloquinoline quinone (PQQ) biosynthetic pathway.


ensembl_gene_id: TMS3_0124330
symbol: pqqC
gene_biotype: protein_coding
description:
  Pyrroloquinoline quinone biosynthesis protein PqqC; Ring cyclization and eight-electron oxidation of 3a-(2-amino- 2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline-7,9- dicarboxylic-acid to PQQ.


ensembl_gene_id: TMS3_0124335
symbol: pqqB
gene_biotype: protein_coding
description:
  Pyrroloquinoline quinone biosynthesis protein PqqB; May be involved in the transport of PQQ or its precursor to the periplasm; Belongs to the PqqB family.


ensembl_gene_id: TMS3_0124355
symbol: KFX67452.1
gene_biotype: protein_coding
description:
  Ethyl tert-butyl ether degradation protein EthD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0124360
symbol: KFX67453.1
gene_biotype: protein_coding
description:
  Sulfur oxidation protein SoxZ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0124400
symbol: KFX67461.1
gene_biotype: protein_coding
description:
  Multidrug ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0124420
symbol: KFX67465.1
gene_biotype: protein_coding
description:
  GfdT protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0124435
symbol: KFX67467.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase M16 family.


ensembl_gene_id: TMS3_0124440
symbol: dusA
gene_biotype: protein_coding
description:
  tRNA-dihydrouridine synthase A; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs; Belongs to the Dus family. DusA subfamily.


ensembl_gene_id: TMS3_0124445
symbol: tal
gene_biotype: protein_coding
description:
  Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.


ensembl_gene_id: TMS3_0124480
symbol: KFX67351.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: TMS3_0124530
symbol: KFX67356.1
gene_biotype: protein_coding
description:
  Rubredoxin-NAD(+) reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0124680
symbol: KFX67378.1
gene_biotype: protein_coding
description:
  2-hydroxymuconate tautomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 4-oxalocrotonate tautomerase family.


ensembl_gene_id: TMS3_0124685
symbol: KFX67379.1
gene_biotype: protein_coding
description:
  ATP:cob(I)alamin adenosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0124730
symbol: KFX67386.1
gene_biotype: protein_coding
description:
  Benzyl alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0124735
symbol: KFX67387.1
gene_biotype: protein_coding
description:
  Benzaldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: TMS3_0124740
symbol: KFX67388.1
gene_biotype: protein_coding
description:
  Xylene monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0124755
symbol: KFX67391.1
gene_biotype: protein_coding
description:
  Aromatic hydrocarbon degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0124875
symbol: KFX67405.1
gene_biotype: protein_coding
description:
  Metal-chelation protein CHAD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0124885
symbol: KFX67407.1
gene_biotype: protein_coding
description:
  Relaxase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0124890
symbol: KFX67408.1
gene_biotype: protein_coding
description:
  Recombinase XerC; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 'phage' integrase family.


ensembl_gene_id: TMS3_0124970
symbol: KFX67331.1
gene_biotype: protein_coding
description:
  Type 4 fimbriae expression regulatory protein PilR; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0124980
symbol: KFX67333.1
gene_biotype: protein_coding
description:
  MYND finger; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0124985
symbol: nadE
gene_biotype: protein_coding
description:
  NAD synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.


ensembl_gene_id: TMS3_0124990
symbol: bamD
gene_biotype: protein_coding
description:
  DNA transporter; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.


ensembl_gene_id: TMS3_0124995
symbol: KFX67336.1
gene_biotype: protein_coding
description:
  Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: TMS3_0125000
symbol: KFX67337.1
gene_biotype: protein_coding
description:
  Laccase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the multicopper oxidase YfiH/RL5 family.


ensembl_gene_id: TMS3_0125005
symbol: clpB
gene_biotype: protein_coding
description:
  Protein disaggregation chaperone; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.


ensembl_gene_id: TMS3_0125065
symbol: KFX67324.1
gene_biotype: protein_coding
description:
  Pyruvate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0125075
symbol: KFX67319.1
gene_biotype: protein_coding
description:
  Cytochrome Cbb3; Derived by automated computational analysis using gene prediction method: Protein Homology.


