# geneInfo

ensembl_gene_id: SAMN04488076_101103
symbol: nadE
gene_biotype: protein_coding
description:
  NH(3)-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.


ensembl_gene_id: SAMN04488076_101108
symbol: SFK55731.1
gene_biotype: protein_coding
description:
  DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: SAMN04488076_101119
symbol: mprF
gene_biotype: protein_coding
description:
  Phosphatidylglycerol lysyltransferase; Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms.


ensembl_gene_id: SAMN04488076_10112
symbol: der
gene_biotype: protein_coding
description:
  GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.


ensembl_gene_id: SAMN04488076_10113
symbol: SFK53843.1
gene_biotype: protein_coding
description:
  DNA-binding protein HU-beta; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.


ensembl_gene_id: SAMN04488076_101142
symbol: SFK56435.1
gene_biotype: protein_coding
description:
  Type I restriction enzyme, R subunit; Subunit R is required for both nuclease and ATPase activities, but not for modification.


ensembl_gene_id: SAMN04488076_101161
symbol: cutC
gene_biotype: protein_coding
description:
  Copper homeostasis protein; Participates in the control of copper homeostasis. Belongs to the CutC family.


ensembl_gene_id: SAMN04488076_101166
symbol: lspA
gene_biotype: protein_coding
description:
  Signal peptidase II; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.


ensembl_gene_id: SAMN04488076_101167
symbol: SFK56906.1
gene_biotype: protein_coding
description:
  23S rRNA pseudouridine1911/1915/1917 synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: SAMN04488076_101169
symbol: pyrR
gene_biotype: protein_coding
description:
  Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant; Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrR subfamily.


ensembl_gene_id: SAMN04488076_10117
symbol: dapB
gene_biotype: protein_coding
description:
  Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.


ensembl_gene_id: SAMN04488076_101170
symbol: pyrK
gene_biotype: protein_coding
description:
  Dihydroorotate dehydrogenase electron transfer subunit; Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD(+).


ensembl_gene_id: SAMN04488076_101171
symbol: pyrD
gene_biotype: protein_coding
description:
  Dihydroorotate dehydrogenase (NAD+) catalytic subunit; Catalyzes the conversion of dihydroorotate to orotate.


ensembl_gene_id: SAMN04488076_101172
symbol: pyrF
gene_biotype: protein_coding
description:
  Orotidine-5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily.


ensembl_gene_id: SAMN04488076_101173
symbol: pyrE
gene_biotype: protein_coding
description:
  Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).


ensembl_gene_id: SAMN04488076_101178
symbol: SFK57093.1
gene_biotype: protein_coding
description:
  NFACT-R_1 domain-containing protein; Predicted component of the ribosome quality control (RQC) complex, YloA/Tae2 family, contains fibronectin-binding (FbpA) and DUF814 domains.


ensembl_gene_id: SAMN04488076_10118
symbol: cca
gene_biotype: protein_coding
description:
  tRNA nucleotidyltransferase (CCA-adding enzyme); Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate.


ensembl_gene_id: SAMN04488076_101180
symbol: SFK57127.1
gene_biotype: protein_coding
description:
  Putative ABC transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: SAMN04488076_101183
symbol: SFK57180.1
gene_biotype: protein_coding
description:
  Diaminopimelate dehydrogenase; Catalyzes the reversible NADPH-dependent reductive amination of L-2-amino-6-oxopimelate, the acyclic form of L- tetrahydrodipicolinate, to generate the meso compound, D,L-2,6- diaminopimelate.


ensembl_gene_id: SAMN04488076_101184
symbol: pyrB
gene_biotype: protein_coding
description:
  Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.


ensembl_gene_id: SAMN04488076_101185
symbol: pyrC
gene_biotype: protein_coding
description:
  Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.


ensembl_gene_id: SAMN04488076_101188
symbol: xpt
gene_biotype: protein_coding
description:
  Xanthine phosphoribosyltransferase; Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis.


ensembl_gene_id: SAMN04488076_101191
symbol: SFK57348.1
gene_biotype: protein_coding
description:
  Phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.


ensembl_gene_id: SAMN04488076_101197
symbol: ilvC
gene_biotype: protein_coding
description:
  Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate.


ensembl_gene_id: SAMN04488076_101198
symbol: ilvA
gene_biotype: protein_coding
description:
  L-threonine ammonia-lyase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA.


ensembl_gene_id: SAMN04488076_101227
symbol: SFK58115.1
gene_biotype: protein_coding
description:
  Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.


ensembl_gene_id: SAMN04488076_101234
symbol: queE
gene_biotype: protein_coding
description:
  7-carboxy-7-deazaguanine synthase; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds.


ensembl_gene_id: SAMN04488076_10125
symbol: nth
gene_biotype: protein_coding
description:
  DNA-(apurinic or apyrimidinic site) lyase; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.


ensembl_gene_id: SAMN04488076_10127
symbol: recU
gene_biotype: protein_coding
description:
  Recombination protein U; Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation; Belongs to the RecU family.


ensembl_gene_id: SAMN04488076_10128
symbol: tig
gene_biotype: protein_coding
description:
  Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.


ensembl_gene_id: SAMN04488076_10129
symbol: clpX
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.


ensembl_gene_id: SAMN04488076_10130
symbol: engB
gene_biotype: protein_coding
description:
  GTP-binding protein; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.


ensembl_gene_id: SAMN04488076_10131
symbol: dnaG
gene_biotype: protein_coding
description:
  DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.


ensembl_gene_id: SAMN04488076_10132
symbol: sigA
gene_biotype: protein_coding
description:
  RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.


ensembl_gene_id: SAMN04488076_10134
symbol: SFK54165.1
gene_biotype: protein_coding
description:
  Dinuclear metal center protein, YbgI/SA1388 family; Belongs to the GTP cyclohydrolase I type 2/NIF3 family.


ensembl_gene_id: SAMN04488076_10135
symbol: pepT
gene_biotype: protein_coding
description:
  Tripeptide aminopeptidase; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family.


ensembl_gene_id: SAMN04488076_10138
symbol: truB
gene_biotype: protein_coding
description:
  tRNA pseudouridine55 synthase; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.


ensembl_gene_id: SAMN04488076_10140
symbol: SFK54283.1
gene_biotype: protein_coding
description:
  Oxygen-independent coproporphyrinogen-3 oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: SAMN04488076_10141
symbol: hrcA
gene_biotype: protein_coding
description:
  Heat-inducible transcription repressor HrcA; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons.


ensembl_gene_id: SAMN04488076_10142
symbol: grpE
gene_biotype: protein_coding
description:
  Molecular chaperone GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP [...]


ensembl_gene_id: SAMN04488076_10144
symbol: dnaJ
gene_biotype: protein_coding
description:
  Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...]


ensembl_gene_id: SAMN04488076_10146
symbol: lepA
gene_biotype: protein_coding
description:
  GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.


ensembl_gene_id: SAMN04488076_10147
symbol: SFK54413.1
gene_biotype: protein_coding
description:
  Peroxiredoxin (alkyl hydroperoxide reductase subunit C); Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.


ensembl_gene_id: SAMN04488076_10151
symbol: thyA
gene_biotype: protein_coding
description:
  Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis.


ensembl_gene_id: SAMN04488076_10152
symbol: SFK54519.1
gene_biotype: protein_coding
description:
  Dihydrofolate reductase; Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis.


ensembl_gene_id: SAMN04488076_10160
symbol: SFK54694.1
gene_biotype: protein_coding
description:
  Ribosome biogenesis GTPase A; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.


ensembl_gene_id: SAMN04488076_10163
symbol: topA
gene_biotype: protein_coding
description:
  DNA topoisomerase-1; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]


ensembl_gene_id: SAMN04488076_10164
symbol: trmFO
gene_biotype: protein_coding
description:
  methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase; Catalyzes the folate-dependent formation of 5-methyl-uridine at position 54 (M-5-U54) in all tRNAs; Belongs to the MnmG family. TrmFO subfamily.


ensembl_gene_id: SAMN04488076_10165
symbol: xerC
gene_biotype: protein_coding
description:
  Integrase/recombinase XerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.


ensembl_gene_id: SAMN04488076_10166
symbol: hslV
gene_biotype: protein_coding
description:
  ATP-dependent HslUV protease, peptidase subunit HslV; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery.


ensembl_gene_id: SAMN04488076_10167
symbol: hslU
gene_biotype: protein_coding
description:
  ATP-dependent HslUV protease ATP-binding subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis.


ensembl_gene_id: SAMN04488076_10168
symbol: codY
gene_biotype: protein_coding
description:
  Transcriptional pleiotropic repressor; DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor; Belongs to the CodY family.


ensembl_gene_id: SAMN04488076_10170
symbol: plsY
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate acyltransferase PlsY; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.


ensembl_gene_id: SAMN04488076_10171
symbol: parE
gene_biotype: protein_coding
description:
  Topoisomerase-4 subunit B; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 2 subfamily.


ensembl_gene_id: SAMN04488076_10172
symbol: parC
gene_biotype: protein_coding
description:
  Topoisomerase-4 subunit A; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase GyrA/ParC subunit family. ParC type 2 subfamily.


ensembl_gene_id: SAMN04488076_10174
symbol: SFK55006.1
gene_biotype: protein_coding
description:
  Pyruvate formate lyase activating enzyme; Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine; Belongs to the organic radical-activating enzymes family.


ensembl_gene_id: SAMN04488076_10189
symbol: ureE
gene_biotype: protein_coding
description:
  Urease accessory protein; Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly. Belongs to the UreE family.


ensembl_gene_id: SAMN04488076_10190
symbol: ureF
gene_biotype: protein_coding
description:
  Urease accessory protein; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.


ensembl_gene_id: SAMN04488076_10191
symbol: ureG
gene_biotype: protein_coding
description:
  Urease accessory protein; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG.


ensembl_gene_id: SAMN04488076_102113
symbol: uppP
gene_biotype: protein_coding
description:
  Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.


ensembl_gene_id: SAMN04488076_102117
symbol: SFK62991.1
gene_biotype: protein_coding
description:
  Starch phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.


ensembl_gene_id: SAMN04488076_102118
symbol: glgA
gene_biotype: protein_coding
description:
  Glycosyl transferases group 1; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position. Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.


ensembl_gene_id: SAMN04488076_102125
symbol: SFK63121.1
gene_biotype: protein_coding
description:
  Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: SAMN04488076_102127
symbol: luxS
gene_biotype: protein_coding
description:
  S-ribosylhomocysteine lyase /quorum-sensing autoinducer 2 (AI-2) synthesis protein LuxS; Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5-dihydroxy-2,3-pentadione (DPD). Belongs to the LuxS family.


ensembl_gene_id: SAMN04488076_102132
symbol: aroC
gene_biotype: protein_coding
description:
  Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.


ensembl_gene_id: SAMN04488076_102133
symbol: aroA
gene_biotype: protein_coding
description:
  3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.


ensembl_gene_id: SAMN04488076_102134
symbol: aroB
gene_biotype: protein_coding
description:
  3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).


ensembl_gene_id: SAMN04488076_102137
symbol: aroE
gene_biotype: protein_coding
description:
  Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).


ensembl_gene_id: SAMN04488076_102138
symbol: aroK
gene_biotype: protein_coding
description:
  Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.


ensembl_gene_id: SAMN04488076_102151
symbol: SFK63547.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation/dephosphorylation.


ensembl_gene_id: SAMN04488076_102183
symbol: gcvPB
gene_biotype: protein_coding
description:
  Glycine dehydrogenase subunit 2; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. C-terminal subunit subfamily.


ensembl_gene_id: SAMN04488076_102184
symbol: gcvPA
gene_biotype: protein_coding
description:
  Glycine dehydrogenase subunit 1; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein.


ensembl_gene_id: SAMN04488076_102185
symbol: gcvH
gene_biotype: protein_coding
description:
  Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.


ensembl_gene_id: SAMN04488076_102187
symbol: SFK64092.1
gene_biotype: protein_coding
description:
  Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.


ensembl_gene_id: SAMN04488076_102204
symbol: fni
gene_biotype: protein_coding
description:
  Isopentenyl-diphosphate delta-isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).


ensembl_gene_id: SAMN04488076_102208
symbol: rpiA
gene_biotype: protein_coding
description:
  Ribose-5-phosphate isomerase; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.


ensembl_gene_id: SAMN04488076_102216
symbol: potA
gene_biotype: protein_coding
description:
  Spermidine/putrescine transport system ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.


ensembl_gene_id: SAMN04488076_102234
symbol: SFK64901.1
gene_biotype: protein_coding
description:
  Ribonucleoside-diphosphate reductase beta chain; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family.


ensembl_gene_id: SAMN04488076_102235
symbol: SFK64920.1
gene_biotype: protein_coding
description:
  Ribonucleoside-diphosphate reductase alpha chain; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.


ensembl_gene_id: SAMN04488076_102238
symbol: ung
gene_biotype: protein_coding
description:
  Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.


ensembl_gene_id: SAMN04488076_10226
symbol: lipA
gene_biotype: protein_coding
description:
  Lipoic acid synthetase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.


ensembl_gene_id: SAMN04488076_10268
symbol: smpB
gene_biotype: protein_coding
description:
  SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...]


ensembl_gene_id: SAMN04488076_10269
symbol: rnr
gene_biotype: protein_coding
description:
  Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.


ensembl_gene_id: SAMN04488076_10271
symbol: SFK62183.1
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.


ensembl_gene_id: SAMN04488076_10272
symbol: SFK62198.1
gene_biotype: protein_coding
description:
  D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: SAMN04488076_10273
symbol: serC
gene_biotype: protein_coding
description:
  Phosphoserine aminotransferase apoenzyme; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine.


ensembl_gene_id: SAMN04488076_10274
symbol: eno
gene_biotype: protein_coding
description:
  Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.


ensembl_gene_id: SAMN04488076_10275
symbol: gpmI
gene_biotype: protein_coding
description:
  Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.


ensembl_gene_id: SAMN04488076_10276
symbol: tpiA
gene_biotype: protein_coding
description:
  Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.


ensembl_gene_id: SAMN04488076_10278
symbol: SFK62317.1
gene_biotype: protein_coding
description:
  Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: SAMN04488076_10282
symbol: clpP
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease, protease subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: SAMN04488076_10285
symbol: murA
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.


ensembl_gene_id: SAMN04488076_10287
symbol: atpC
gene_biotype: protein_coding
description:
  F-type H+-transporting ATPase subunit epsilon; Produces ATP from ADP in the presence of a proton gradient across the membrane.


ensembl_gene_id: SAMN04488076_10288
symbol: atpD
gene_biotype: protein_coding
description:
  ATP synthase F1 subcomplex beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.


ensembl_gene_id: SAMN04488076_10289
symbol: atpG
gene_biotype: protein_coding
description:
  ATP synthase F1 subcomplex gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.


ensembl_gene_id: SAMN04488076_10290
symbol: atpA
gene_biotype: protein_coding
description:
  F-type H+-transporting ATPase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.


ensembl_gene_id: SAMN04488076_10291
symbol: atpH
gene_biotype: protein_coding
description:
  ATP synthase delta (OSCP) subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: SAMN04488076_10292
symbol: atpF
gene_biotype: protein_coding
description:
  F-type H+-transporting ATPase subunit b; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.


ensembl_gene_id: SAMN04488076_10293
symbol: atpE
gene_biotype: protein_coding
description:
  ATP synthase F0 subcomplex C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: SAMN04488076_10294
symbol: atpB
gene_biotype: protein_coding
description:
  F-type H+-transporting ATPase subunit a; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.


ensembl_gene_id: SAMN04488076_10295
symbol: upp
gene_biotype: protein_coding
description:
  Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.


ensembl_gene_id: SAMN04488076_10296
symbol: glyA
gene_biotype: protein_coding
description:
  Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.


ensembl_gene_id: SAMN04488076_10297
symbol: SFK62661.1
gene_biotype: protein_coding
description:
  L-threonylcarbamoyladenylate synthase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.


ensembl_gene_id: SAMN04488076_10298
symbol: prmC
gene_biotype: protein_coding
description:
  Release factor glutamine methyltransferase; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.


ensembl_gene_id: SAMN04488076_10299
symbol: prfA
gene_biotype: protein_coding
description:
  Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.


ensembl_gene_id: SAMN04488076_103103
symbol: zwf
gene_biotype: protein_coding
description:
  Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.


ensembl_gene_id: SAMN04488076_103104
symbol: cshB
gene_biotype: protein_coding
description:
  ATP-dependent RNA helicase CshB; Probable DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures.


ensembl_gene_id: SAMN04488076_103106
symbol: SFK68960.1
gene_biotype: protein_coding
description:
  Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.


ensembl_gene_id: SAMN04488076_103122
symbol: SFK69268.1
gene_biotype: protein_coding
description:
  6-phosphogluconate dehydrogenase (decarboxylating); Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.


ensembl_gene_id: SAMN04488076_103125
symbol: yidC
gene_biotype: protein_coding
description:
  YidC/Oxa1 family membrane protein insertase; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins; Belongs to the OXA1/ALB3/YidC family. Type 2 subfamily.


ensembl_gene_id: SAMN04488076_103131
symbol: SFK69429.1
gene_biotype: protein_coding
description:
  Simple sugar transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: SAMN04488076_103132
symbol: SFK69448.1
gene_biotype: protein_coding
description:
  Nucleoside ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: SAMN04488076_103137
symbol: SFK69524.1
gene_biotype: protein_coding
description:
  CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: SAMN04488076_103139
symbol: recA
gene_biotype: protein_coding
description:
  Recombination protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.


ensembl_gene_id: SAMN04488076_103143
symbol: mutS
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.


ensembl_gene_id: SAMN04488076_103144
symbol: mutL
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.


ensembl_gene_id: SAMN04488076_103147
symbol: ruvA
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase subunit RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.


ensembl_gene_id: SAMN04488076_103148
symbol: ruvB
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase subunit RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.


ensembl_gene_id: SAMN04488076_103149
symbol: queA
gene_biotype: protein_coding
description:
  S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).


ensembl_gene_id: SAMN04488076_103152
symbol: pfkA
gene_biotype: protein_coding
description:
  6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.


ensembl_gene_id: SAMN04488076_103156
symbol: xerD
gene_biotype: protein_coding
description:
  Integrase/recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.


ensembl_gene_id: SAMN04488076_103157
symbol: deoB
gene_biotype: protein_coding
description:
  Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family.


ensembl_gene_id: SAMN04488076_103158
symbol: SFK69898.1
gene_biotype: protein_coding
description:
  Purine-nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.


ensembl_gene_id: SAMN04488076_103159
symbol: lysA
gene_biotype: protein_coding
description:
  Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.


ensembl_gene_id: SAMN04488076_103161
symbol: scpA
gene_biotype: protein_coding
description:
  Condensin subunit ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: SAMN04488076_103162
symbol: scpB
gene_biotype: protein_coding
description:
  Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: SAMN04488076_103167
symbol: SFK70030.1
gene_biotype: protein_coding
description:
  Riboflavin transporter FmnP; Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins; Belongs to the prokaryotic riboflavin transporter (P-RFT) (TC 2.A.87) family.


ensembl_gene_id: SAMN04488076_10320
symbol: SFK67247.1
gene_biotype: protein_coding
description:
  Uncharacterized protein; Cell fate regulator YlbF, YheA/YmcA/DUF963 family (controls sporulation, competence, biofilm development); Belongs to the UPF0342 family.


ensembl_gene_id: SAMN04488076_10323
symbol: coaD
gene_biotype: protein_coding
description:
  Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.


ensembl_gene_id: SAMN04488076_10329
symbol: uvrB
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate  [...]


ensembl_gene_id: SAMN04488076_10330
symbol: rpsO
gene_biotype: protein_coding
description:
  SSU ribosomal protein S15P; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.


ensembl_gene_id: SAMN04488076_10331
symbol: pnp
gene_biotype: protein_coding
description:
  Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.


ensembl_gene_id: SAMN04488076_10334
symbol: SFK67505.1
gene_biotype: protein_coding
description:
  Oxaloacetate decarboxylase, beta subunit; Tunnel subunit of the primary sodium pump glutaconyl-CoA decarboxylase (GCD).


ensembl_gene_id: SAMN04488076_10338
symbol: asd
gene_biotype: protein_coding
description:
  Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.


ensembl_gene_id: SAMN04488076_10339
symbol: rnj
gene_biotype: protein_coding
description:
  Ribonuclease J; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay.


ensembl_gene_id: SAMN04488076_10341
symbol: SFK67638.1
gene_biotype: protein_coding
description:
  Cardiolipin synthase; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol.


ensembl_gene_id: SAMN04488076_10349
symbol: atpA-2
gene_biotype: protein_coding
description:
  V/A-type H+-transporting ATPase subunit A; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.


ensembl_gene_id: SAMN04488076_1035
symbol: def
gene_biotype: protein_coding
description:
  Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.


ensembl_gene_id: SAMN04488076_10350
symbol: atpB-2
gene_biotype: protein_coding
description:
  V/A-type H+-transporting ATPase subunit B; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit.


ensembl_gene_id: SAMN04488076_10351
symbol: atpD-2
gene_biotype: protein_coding
description:
  V/A-type H+-transporting ATPase subunit D; Produces ATP from ADP in the presence of a proton gradient across the membrane.


ensembl_gene_id: SAMN04488076_10353
symbol: rpoZ
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.


ensembl_gene_id: SAMN04488076_10354
symbol: priA
gene_biotype: protein_coding
description:
  Replication restart DNA helicase PriA; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.


ensembl_gene_id: SAMN04488076_10355
symbol: fmt
gene_biotype: protein_coding
description:
  methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.


ensembl_gene_id: SAMN04488076_10356
symbol: SFK67954.1
gene_biotype: protein_coding
description:
  16S rRNA (cytosine967-C5)-methyltransferase; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.


ensembl_gene_id: SAMN04488076_10359
symbol: rsgA
gene_biotype: protein_coding
description:
  Ribosome biogenesis GTPase; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.


ensembl_gene_id: SAMN04488076_10365
symbol: recG
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.


ensembl_gene_id: SAMN04488076_10366
symbol: plsX
gene_biotype: protein_coding
description:
  Phosphate:acyl-[acyl carrier protein] acyltransferase; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.


ensembl_gene_id: SAMN04488076_1037
symbol: pdhA
gene_biotype: protein_coding
description:
  Pyruvate dehydrogenase E1 component alpha subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3).


ensembl_gene_id: SAMN04488076_10373
symbol: rnc
gene_biotype: protein_coding
description:
  Ribonuclease-3; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.


ensembl_gene_id: SAMN04488076_10374
symbol: smc
gene_biotype: protein_coding
description:
  Condensin subunit Smc; Required for chromosome condensation and partitioning. Belongs to the SMC family.


ensembl_gene_id: SAMN04488076_10376
symbol: ftsY
gene_biotype: protein_coding
description:
  Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC).


ensembl_gene_id: SAMN04488076_10377
symbol: SFK68420.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a regulatory protein.


ensembl_gene_id: SAMN04488076_10378
symbol: ffh
gene_biotype: protein_coding
description:
  Signal recognition particle subunit FFH/SRP54 (srp54); Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily.


ensembl_gene_id: SAMN04488076_10381
symbol: rimM
gene_biotype: protein_coding
description:
  16S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.


ensembl_gene_id: SAMN04488076_10382
symbol: trmD
gene_biotype: protein_coding
description:
  tRNA (guanine37-N1)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.


ensembl_gene_id: SAMN04488076_10383
symbol: rplS
gene_biotype: protein_coding
description:
  LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.


ensembl_gene_id: SAMN04488076_10388
symbol: clpB
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease ATP-binding subunit ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.


ensembl_gene_id: SAMN04488076_10393
symbol: tgt
gene_biotype: protein_coding
description:
  Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form t [...]


ensembl_gene_id: SAMN04488076_10396
symbol: SFK68786.1
gene_biotype: protein_coding
description:
  Acetaldehyde dehydrogenase / alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.


ensembl_gene_id: SAMN04488076_10398
symbol: dinB
gene_biotype: protein_coding
description:
  DNA polymerase-4; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.


ensembl_gene_id: SAMN04488076_104100
symbol: accD
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase carboxyl transferase subunit beta; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.


ensembl_gene_id: SAMN04488076_104106
symbol: SFK74868.1
gene_biotype: protein_coding
description:
  Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family.


ensembl_gene_id: SAMN04488076_104119
symbol: SFK75095.1
gene_biotype: protein_coding
description:
  Polysaccharide biosynthesis protein; NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC.


ensembl_gene_id: SAMN04488076_104124
symbol: map
gene_biotype: protein_coding
description:
  Methionyl aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.


ensembl_gene_id: SAMN04488076_10413
symbol: bioB
gene_biotype: protein_coding
description:
  Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.


ensembl_gene_id: SAMN04488076_10414
symbol: bioD
gene_biotype: protein_coding
description:
  Dethiobiotin synthetase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring.


ensembl_gene_id: SAMN04488076_104146
symbol: azoR
gene_biotype: protein_coding
description:
  FMN-dependent NADH-azoreductase; Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family.


ensembl_gene_id: SAMN04488076_10415
symbol: bioA
gene_biotype: protein_coding
description:
  Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. BioA subfamily.


ensembl_gene_id: SAMN04488076_104167
symbol: SFK76017.1
gene_biotype: protein_coding
description:
  Fur family transcriptional regulator, peroxide stress response regulator; Belongs to the Fur family.


ensembl_gene_id: SAMN04488076_104168
symbol: proC
gene_biotype: protein_coding
description:
  Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.


ensembl_gene_id: SAMN04488076_104169
symbol: SFK76060.1
gene_biotype: protein_coding
description:
  Zinc transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family.


ensembl_gene_id: SAMN04488076_1042
symbol: SFK72714.1
gene_biotype: protein_coding
description:
  Cystine transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: SAMN04488076_10422
symbol: SFK73070.1
gene_biotype: protein_coding
description:
  Phosphotransferase system eiib cysteine phosphorylation site; PTS system sucrose-specific IIB component, Glc family (TC 4.A.1.2.12)/PTS system sucrose-specific IIC component, Glc family (TC 4.A.1.2.12).


ensembl_gene_id: SAMN04488076_10423
symbol: SFK73088.1
gene_biotype: protein_coding
description:
  Beta-fructofuranosidase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.


ensembl_gene_id: SAMN04488076_10428
symbol: SFK73212.1
gene_biotype: protein_coding
description:
  PTS system, cellobiose-specific IIC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.


ensembl_gene_id: SAMN04488076_10433
symbol: guaC
gene_biotype: protein_coding
description:
  GMP reductase; Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides; Belongs to the IMPDH/GMPR family. GuaC type 2 subfamily.


ensembl_gene_id: SAMN04488076_105102
symbol: prmA
gene_biotype: protein_coding
description:
  Ribosomal protein L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family.


ensembl_gene_id: SAMN04488076_105103
symbol: SFK79753.1
gene_biotype: protein_coding
description:
  16S rRNA (uracil1498-N3)-methyltransferase; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.


ensembl_gene_id: SAMN04488076_105104
symbol: deoC
gene_biotype: protein_coding
description:
  Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.


ensembl_gene_id: SAMN04488076_105105
symbol: SFK79791.1
gene_biotype: protein_coding
description:
  GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.


ensembl_gene_id: SAMN04488076_105106
symbol: dtd
gene_biotype: protein_coding
description:
  D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family.


ensembl_gene_id: SAMN04488076_105111
symbol: aspS
gene_biotype: protein_coding
description:
  aspartyl-tRNA synthetase; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor end of tRNA(Asp). Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.


ensembl_gene_id: SAMN04488076_105112
symbol: nfo
gene_biotype: protein_coding
description:
  Endonuclease IV; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin.


ensembl_gene_id: SAMN04488076_105119
symbol: ybeY
gene_biotype: protein_coding
description:
  Probable rRNA maturation factor; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.


ensembl_gene_id: SAMN04488076_10512
symbol: SFK77794.1
gene_biotype: protein_coding
description:
  Phosphotransferase system eiib component type 2/3; PTS system lactose-specific IIB component, Lac family (TC 4.A.3.1.1)/PTS system lactose-specific IIC component, Lac family (TC 4.A.3.1.1).


ensembl_gene_id: SAMN04488076_105121
symbol: era
gene_biotype: protein_coding
description:
  GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.


ensembl_gene_id: SAMN04488076_105127
symbol: obg
gene_biotype: protein_coding
description:
  GTP-binding protein; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.


ensembl_gene_id: SAMN04488076_105129
symbol: rnz
gene_biotype: protein_coding
description:
  Ribonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family.


ensembl_gene_id: SAMN04488076_105132
symbol: apt
gene_biotype: protein_coding
description:
  Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.


ensembl_gene_id: SAMN04488076_105133
symbol: lexA
gene_biotype: protein_coding
description:
  Repressor LexA; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair.


ensembl_gene_id: SAMN04488076_105140
symbol: tsf
gene_biotype: protein_coding
description:
  Elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.


ensembl_gene_id: SAMN04488076_105142
symbol: frr
gene_biotype: protein_coding
description:
  Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.


ensembl_gene_id: SAMN04488076_105143
symbol: SFK80489.1
gene_biotype: protein_coding
description:
  Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.


ensembl_gene_id: SAMN04488076_105146
symbol: polC
gene_biotype: protein_coding
description:
  DNA polymerase-3 subunit alpha; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: SAMN04488076_105147
symbol: rimP
gene_biotype: protein_coding
description:
  Ribosome maturation factor RimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.


ensembl_gene_id: SAMN04488076_105151
symbol: infB
gene_biotype: protein_coding
description:
  Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.


ensembl_gene_id: SAMN04488076_105152
symbol: rbfA
gene_biotype: protein_coding
description:
  Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.


ensembl_gene_id: SAMN04488076_105153
symbol: SFK80701.1
gene_biotype: protein_coding
description:
  Monovalent cation:H+ antiporter, CPA1 family; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family.


ensembl_gene_id: SAMN04488076_105155
symbol: katG
gene_biotype: protein_coding
description:
  Catalase-peroxidase; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily.


ensembl_gene_id: SAMN04488076_105168
symbol: corA
gene_biotype: protein_coding
description:
  Magnesium transporter; Mediates influx of magnesium ions. Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.


ensembl_gene_id: SAMN04488076_10517
symbol: SFK77917.1
gene_biotype: protein_coding
description:
  RNA methyltransferase, TrmH family; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: SAMN04488076_105172
symbol: SFK81079.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid:cation transporter, LIVCS family; Component of the transport system for branched-chain amino acids.


ensembl_gene_id: SAMN04488076_10521
symbol: pheS
gene_biotype: protein_coding
description:
  phenylalanyl-tRNA synthetase, alpha subunit; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.


ensembl_gene_id: SAMN04488076_10522
symbol: pheT
gene_biotype: protein_coding
description:
  phenylalanyl-tRNA synthetase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.


ensembl_gene_id: SAMN04488076_10524
symbol: SFK78103.1
gene_biotype: protein_coding
description:
  Cell division protein ZapA, inhibits GTPase activity of FtsZ; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.


ensembl_gene_id: SAMN04488076_10526
symbol: mutS2
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS2; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.


ensembl_gene_id: SAMN04488076_10532
symbol: SFK78291.1
gene_biotype: protein_coding
description:
  Non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.


ensembl_gene_id: SAMN04488076_10556
symbol: efp
gene_biotype: protein_coding
description:
  Elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.


ensembl_gene_id: SAMN04488076_10558
symbol: nusB
gene_biotype: protein_coding
description:
  NusB antitermination factor; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.


ensembl_gene_id: SAMN04488076_10559
symbol: folD
gene_biotype: protein_coding
description:
  Methenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.


ensembl_gene_id: SAMN04488076_1056
symbol: SFK77680.1
gene_biotype: protein_coding
description:
  Ribosomal small subunit pseudouridine synthase A; Belongs to the pseudouridine synthase RsuA family.


ensembl_gene_id: SAMN04488076_10560
symbol: xseA
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.


ensembl_gene_id: SAMN04488076_10561
symbol: xseB
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.


ensembl_gene_id: SAMN04488076_10564
symbol: SFK78976.1
gene_biotype: protein_coding
description:
  DNA repair protein RecN (Recombination protein N); May be involved in recombinational repair of damaged DNA.


ensembl_gene_id: SAMN04488076_10566
symbol: miaA
gene_biotype: protein_coding
description:
  tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.


ensembl_gene_id: SAMN04488076_10567
symbol: hflX
gene_biotype: protein_coding
description:
  GTP-binding protein HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.


ensembl_gene_id: SAMN04488076_10577
symbol: fabH
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] synthase-3; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.


ensembl_gene_id: SAMN04488076_10578
symbol: acpP-2
gene_biotype: protein_coding
description:
  Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.


ensembl_gene_id: SAMN04488076_10581
symbol: SFK79325.1
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: SAMN04488076_10582
symbol: SFK79348.1
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.


ensembl_gene_id: SAMN04488076_10583
symbol: SFK79360.1
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: SAMN04488076_10584
symbol: fabZ
gene_biotype: protein_coding
description:
  3-hydroxyacyl-[acyl-carrier-protein] dehydratase; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.


ensembl_gene_id: SAMN04488076_10585
symbol: SFK79405.1
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase, biotin carboxylase subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: SAMN04488076_10587
symbol: SFK79438.1
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase carboxyl transferase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.


ensembl_gene_id: SAMN04488076_10598
symbol: gpsB
gene_biotype: protein_coding
description:
  DivIVA domain-containing protein; Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation.


ensembl_gene_id: SAMN04488076_106100
symbol: rpsC
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.


ensembl_gene_id: SAMN04488076_106101
symbol: rplV
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.


ensembl_gene_id: SAMN04488076_106102
symbol: rpsS
gene_biotype: protein_coding
description:
  SSU ribosomal protein S19P; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.


ensembl_gene_id: SAMN04488076_106103
symbol: rplB
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.


ensembl_gene_id: SAMN04488076_106104
symbol: rplW
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.


ensembl_gene_id: SAMN04488076_106106
symbol: rplC
gene_biotype: protein_coding
description:
  LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.


ensembl_gene_id: SAMN04488076_106107
symbol: rpsJ
gene_biotype: protein_coding
description:
  SSU ribosomal protein S10P; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.


ensembl_gene_id: SAMN04488076_106110
symbol: tuf
gene_biotype: protein_coding
description:
  Translation elongation factor 1A (EF-1A/EF-Tu); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.


ensembl_gene_id: SAMN04488076_106111
symbol: fusA
gene_biotype: protein_coding
description:
  Elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.


ensembl_gene_id: SAMN04488076_106112
symbol: rpsG
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.


ensembl_gene_id: SAMN04488076_106113
symbol: rpsL
gene_biotype: protein_coding
description:
  SSU ribosomal protein S12P; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.


ensembl_gene_id: SAMN04488076_106115
symbol: SFK84503.1
gene_biotype: protein_coding
description:
  tRNA-U20-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.


ensembl_gene_id: SAMN04488076_106117
symbol: hslO
gene_biotype: protein_coding
description:
  Molecular chaperone Hsp33; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress.


ensembl_gene_id: SAMN04488076_106118
symbol: ftsH
gene_biotype: protein_coding
description:
  Cell division protease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family.  In the central section; belongs to the AAA ATPase family.


ensembl_gene_id: SAMN04488076_106119
symbol: SFK84581.1
gene_biotype: protein_coding
description:
  Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.


ensembl_gene_id: SAMN04488076_106120
symbol: tilS
gene_biotype: protein_coding
description:
  tRNA(Ile)-lysidine synthase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.


ensembl_gene_id: SAMN04488076_106126
symbol: mfd
gene_biotype: protein_coding
description:
  Transcription-repair coupling factor (superfamily II helicase); Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.


ensembl_gene_id: SAMN04488076_106127
symbol: pth
gene_biotype: protein_coding
description:
  peptidyl-tRNA hydrolase, PTH1 family; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.


ensembl_gene_id: SAMN04488076_106128
symbol: ldh
gene_biotype: protein_coding
description:
  L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family.


ensembl_gene_id: SAMN04488076_106129
symbol: prs
gene_biotype: protein_coding
description:
  Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.


ensembl_gene_id: SAMN04488076_106130
symbol: glmU
gene_biotype: protein_coding
description:
  Glucosamine-1-phosphate N-acetyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain.


ensembl_gene_id: SAMN04488076_106135
symbol: ispE
gene_biotype: protein_coding
description:
  4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.


ensembl_gene_id: SAMN04488076_106138
symbol: rsmA
gene_biotype: protein_coding
description:
  16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.


ensembl_gene_id: SAMN04488076_106139
symbol: rnmV
gene_biotype: protein_coding
description:
  RNAse M5; Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step.


ensembl_gene_id: SAMN04488076_106141
symbol: metG
gene_biotype: protein_coding
description:
  methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 2B subfamily.


ensembl_gene_id: SAMN04488076_106145
symbol: tyrS
gene_biotype: protein_coding
description:
  tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily.


ensembl_gene_id: SAMN04488076_106158
symbol: SFK85327.1
gene_biotype: protein_coding
description:
  NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: SAMN04488076_10620
symbol: pdxS
gene_biotype: protein_coding
description:
  Pyridoxal 5'-phosphate synthase pdxS subunit; Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5- phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively. Belongs to the PdxS/SNZ family.


ensembl_gene_id: SAMN04488076_10621
symbol: pdxT
gene_biotype: protein_coding
description:
  Pyridoxal phosphate synthase yaaE subunit; Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS.


ensembl_gene_id: SAMN04488076_10631
symbol: SFK83015.1
gene_biotype: protein_coding
description:
  Amino acid ABC transporter substrate-binding protein, PAAT family; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: SAMN04488076_10637
symbol: SFK83091.1
gene_biotype: protein_coding
description:
  Sodium ion-translocating decarboxylase, beta subunit; Tunnel subunit of the primary sodium pump glutaconyl-CoA decarboxylase (GCD).


ensembl_gene_id: SAMN04488076_10639
symbol: SFK83121.1
gene_biotype: protein_coding
description:
  Sodium pump decarboxylases, gamma subunit; Catalyzes the decarboxylation of oxaloacetate coupled to Na(+) translocation; Belongs to the OadG family.


ensembl_gene_id: SAMN04488076_10643
symbol: SFK83193.1
gene_biotype: protein_coding
description:
  2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.


ensembl_gene_id: SAMN04488076_10650
symbol: dapA
gene_biotype: protein_coding
description:
  4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).


ensembl_gene_id: SAMN04488076_1066
symbol: rplY
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.


ensembl_gene_id: SAMN04488076_10670
symbol: rplM
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.


ensembl_gene_id: SAMN04488076_10676
symbol: truA
gene_biotype: protein_coding
description:
  tRNA pseudouridine38-40 synthase; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.


ensembl_gene_id: SAMN04488076_10677
symbol: ecfT
gene_biotype: protein_coding
description:
  Energy-coupling factor transport system permease protein; Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.


ensembl_gene_id: SAMN04488076_10678
symbol: ecfA
gene_biotype: protein_coding
description:
  Energy-coupling factor transport system ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.


ensembl_gene_id: SAMN04488076_1068
symbol: SFK82643.1
gene_biotype: protein_coding
description:
  Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.


ensembl_gene_id: SAMN04488076_10681
symbol: rpoA
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: SAMN04488076_10682
symbol: rpsK
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.


ensembl_gene_id: SAMN04488076_10683
symbol: rpsM
gene_biotype: protein_coding
description:
  SSU ribosomal protein S13P; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.


ensembl_gene_id: SAMN04488076_10684
symbol: infA
gene_biotype: protein_coding
description:
  Bacterial translation initiation factor 1 (bIF-1); One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.


ensembl_gene_id: SAMN04488076_10685
symbol: adk
gene_biotype: protein_coding
description:
  Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.


ensembl_gene_id: SAMN04488076_10686
symbol: secY
gene_biotype: protein_coding
description:
  Protein translocase subunit secY/sec61 alpha; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.


ensembl_gene_id: SAMN04488076_10687
symbol: rplO
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.


ensembl_gene_id: SAMN04488076_10689
symbol: rpsE
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.


ensembl_gene_id: SAMN04488076_10690
symbol: rplR
gene_biotype: protein_coding
description:
  LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.


ensembl_gene_id: SAMN04488076_10691
symbol: rplF
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.


ensembl_gene_id: SAMN04488076_10692
symbol: rpsH
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.


ensembl_gene_id: SAMN04488076_10693
symbol: rpsZ
gene_biotype: protein_coding
description:
  SSU ribosomal protein S14P; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.


ensembl_gene_id: SAMN04488076_10694
symbol: rplE
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.


ensembl_gene_id: SAMN04488076_10695
symbol: rplX
gene_biotype: protein_coding
description:
  LSU ribosomal protein L24P; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.


ensembl_gene_id: SAMN04488076_10696
symbol: rplN
gene_biotype: protein_coding
description:
  LSU ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.


ensembl_gene_id: SAMN04488076_10697
symbol: rpsQ
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.


ensembl_gene_id: SAMN04488076_10699
symbol: rplP
gene_biotype: protein_coding
description:
  LSU ribosomal protein L16P; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.


ensembl_gene_id: SAMN04488076_107105
symbol: SFK88257.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: SAMN04488076_107106
symbol: SFK88274.1
gene_biotype: protein_coding
description:
  Amino acid/amide ABC transporter membrane protein 1, HAAT family (TC 3.A.1.4.-); Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: SAMN04488076_10720
symbol: kdpC
gene_biotype: protein_coding
description:
  K+-transporting ATPase ATPase C chain; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP-binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB/KdpC/ATP ternary complex.


ensembl_gene_id: SAMN04488076_10721
symbol: kdpB
gene_biotype: protein_coding
description:
  K+-transporting ATPase ATPase B chain; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system. Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IA subfamily.


ensembl_gene_id: SAMN04488076_10722
symbol: kdpA
gene_biotype: protein_coding
description:
  K+-transporting ATPase ATPase A chain; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane.


ensembl_gene_id: SAMN04488076_10775
symbol: SFK87781.1
gene_biotype: protein_coding
description:
  NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: SAMN04488076_10787
symbol: SFK87978.1
gene_biotype: protein_coding
description:
  23S rRNA (uracil1939-C5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.


ensembl_gene_id: SAMN04488076_10790
symbol: gatB
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily.


ensembl_gene_id: SAMN04488076_10791
symbol: gatA
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).


ensembl_gene_id: SAMN04488076_10792
symbol: gatC
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.


ensembl_gene_id: SAMN04488076_10794
symbol: ligA
gene_biotype: protein_coding
description:
  DNA ligase (NAD+); DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA; Belongs to the NAD-dependent DNA ligase family. LigA subfamily.


ensembl_gene_id: SAMN04488076_10798
symbol: purK
gene_biotype: protein_coding
description:
  5-(carboxyamino)imidazole ribonucleotide synthase; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR); Belongs to the PurK/PurT family.


ensembl_gene_id: SAMN04488076_10810
symbol: SFK89244.1
gene_biotype: protein_coding
description:
  DNA polymerase-3 subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...]


ensembl_gene_id: SAMN04488076_10812
symbol: recF
gene_biotype: protein_coding
description:
  DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family.


ensembl_gene_id: SAMN04488076_10813
symbol: gyrB
gene_biotype: protein_coding
description:
  DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: SAMN04488076_10814
symbol: gyrA
gene_biotype: protein_coding
description:
  DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: SAMN04488076_10816
symbol: SFK89334.1
gene_biotype: protein_coding
description:
  Single-strand DNA-binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.


ensembl_gene_id: SAMN04488076_10817
symbol: rpsR
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.


ensembl_gene_id: SAMN04488076_10820
symbol: SFK89390.1
gene_biotype: protein_coding
description:
  c-di-AMP phosphodiesterase, consists of a GGDEF-like and DHH domains; Has phosphodiesterase (PDE) activity against cyclic-di-AMP (c-di-AMP); Belongs to the GdpP/PdeA phosphodiesterase family.


ensembl_gene_id: SAMN04488076_10822
symbol: SFK89417.1
gene_biotype: protein_coding
description:
  Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.


ensembl_gene_id: SAMN04488076_10823
symbol: purA
gene_biotype: protein_coding
description:
  Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.


ensembl_gene_id: SAMN04488076_10829
symbol: ribH
gene_biotype: protein_coding
description:
  6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.


ensembl_gene_id: SAMN04488076_10830
symbol: ribBA
gene_biotype: protein_coding
description:
  3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.


ensembl_gene_id: SAMN04488076_10832
symbol: SFK89537.1
gene_biotype: protein_coding
description:
  Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.


ensembl_gene_id: SAMN04488076_10834
symbol: SFK89550.1
gene_biotype: protein_coding
description:
  Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.


ensembl_gene_id: SAMN04488076_10836
symbol: argC
gene_biotype: protein_coding
description:
  N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.


ensembl_gene_id: SAMN04488076_10837
symbol: argJ
gene_biotype: protein_coding
description:
  Glutamate N-acetyltransferase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family.


ensembl_gene_id: SAMN04488076_10838
symbol: argB
gene_biotype: protein_coding
description:
  N-acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.


ensembl_gene_id: SAMN04488076_10839
symbol: argD
gene_biotype: protein_coding
description:
  Acetylornithine aminotransferase apoenzyme; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.


ensembl_gene_id: SAMN04488076_10847
symbol: SFK89721.1
gene_biotype: protein_coding
description:
  Cation diffusion facilitator family transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.


ensembl_gene_id: SAMN04488076_10850
symbol: kup
gene_biotype: protein_coding
description:
  KUP system potassium uptake protein; Transport of potassium into the cell; Belongs to the HAK/KUP transporter (TC 2.A.72) family.


ensembl_gene_id: SAMN04488076_10853
symbol: dapF
gene_biotype: protein_coding
description:
  Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.


ensembl_gene_id: SAMN04488076_10854
symbol: SFK89824.1
gene_biotype: protein_coding
description:
  LL-diaminopimelate aminotransferase apoenzyme; Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL- diaminopimelate; Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: SAMN04488076_10859
symbol: SFK89910.1
gene_biotype: protein_coding
description:
  Nitrogen regulatory protein P-II family/ammonium transporter (TC 1.A.11); Belongs to the P(II) protein family.


ensembl_gene_id: SAMN04488076_10862
symbol: SFK89958.1
gene_biotype: protein_coding
description:
  Anaerobic ribonucleoside-triphosphate reductase activating protein; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine.


ensembl_gene_id: SAMN04488076_10869
symbol: SFK90084.1
gene_biotype: protein_coding
description:
  dUTP pyrophosphatase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA.


ensembl_gene_id: SAMN04488076_10870
symbol: radA
gene_biotype: protein_coding
description:
  DNA replication and repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.


ensembl_gene_id: SAMN04488076_10872
symbol: gltX
gene_biotype: protein_coding
description:
  Nondiscriminating glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.


ensembl_gene_id: SAMN04488076_10875
symbol: mrnC
gene_biotype: protein_coding
description:
  Ribonuclease-3 family protein; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family.


ensembl_gene_id: SAMN04488076_10876
symbol: SFK90211.1
gene_biotype: protein_coding
description:
  23S rRNA (guanosine2251-2'-O)-methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: SAMN04488076_1088
symbol: rnpA
gene_biotype: protein_coding
description:
  Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.


ensembl_gene_id: SAMN04488076_10889
symbol: secE
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.


ensembl_gene_id: SAMN04488076_1089
symbol: dnaA
gene_biotype: protein_coding
description:
  Chromosomal replication initiator protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.


ensembl_gene_id: SAMN04488076_10890
symbol: nusG
gene_biotype: protein_coding
description:
  Transcription antitermination protein nusG; Participates in transcription elongation, termination and antitermination.


ensembl_gene_id: SAMN04488076_10891
symbol: rplK
gene_biotype: protein_coding
description:
  LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.


ensembl_gene_id: SAMN04488076_10892
symbol: rplA
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.


ensembl_gene_id: SAMN04488076_10894
symbol: rplJ
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.


ensembl_gene_id: SAMN04488076_10895
symbol: rplL
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.


ensembl_gene_id: SAMN04488076_10897
symbol: rpoB
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: SAMN04488076_10910
symbol: thrB
gene_biotype: protein_coding
description:
  Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily.


ensembl_gene_id: SAMN04488076_109104
symbol: rnj-2
gene_biotype: protein_coding
description:
  RNase J1; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay.


ensembl_gene_id: SAMN04488076_10914
symbol: nadD
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).


ensembl_gene_id: SAMN04488076_10916
symbol: rsfS
gene_biotype: protein_coding
description:
  Ribosome-associated protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.


ensembl_gene_id: SAMN04488076_10918
symbol: tmcAL
gene_biotype: protein_coding
description:
  Predicted nucleotidyltransferase; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of elongator tRNA(Met), using acetate and ATP as substrates. First activates an acetate ion to form acetyladenylate (Ac- AMP) and then transfers the acetyl group to tRNA to form ac(4)C34.


ensembl_gene_id: SAMN04488076_10926
symbol: rsmH
gene_biotype: protein_coding
description:
  16S rRNA (cytosine1402-N4)-methyltransferase; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.


ensembl_gene_id: SAMN04488076_10929
symbol: mraY
gene_biotype: protein_coding
description:
  Phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.


ensembl_gene_id: SAMN04488076_10930
symbol: murD
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.


ensembl_gene_id: SAMN04488076_10931
symbol: murG
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine-N- acetylmuramylpentapeptide N-acetylglucosamine transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.


ensembl_gene_id: SAMN04488076_10932
symbol: divIB
gene_biotype: protein_coding
description:
  Cell division protein FtsQ; Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex; Belongs to the FtsQ/DivIB family. DivIB subfamily.


ensembl_gene_id: SAMN04488076_10933
symbol: ftsA
gene_biotype: protein_coding
description:
  Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.


ensembl_gene_id: SAMN04488076_10934
symbol: ftsZ
gene_biotype: protein_coding
description:
  Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.


ensembl_gene_id: SAMN04488076_10935
symbol: SFK92000.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.


ensembl_gene_id: SAMN04488076_10936
symbol: sepF
gene_biotype: protein_coding
description:
  Cell division inhibitor SepF; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA.


ensembl_gene_id: SAMN04488076_10941
symbol: ileS
gene_biotype: protein_coding
description:
  Isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily.


ensembl_gene_id: SAMN04488076_10944
symbol: SFK92124.1
gene_biotype: protein_coding
description:
  Uncharacterized conserved protein YaaN involved in tellurite resistance; Belongs to the TelA family.


ensembl_gene_id: SAMN04488076_10948
symbol: mtnN
gene_biotype: protein_coding
description:
  Adenosylhomocysteine nucleosidase; Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'- methylthioribose and S-ribosylhomocysteine, respectively. Belongs to the PNP/UDP phosphorylase family. MtnN subfamily.


ensembl_gene_id: SAMN04488076_1095
symbol: SFK91442.1
gene_biotype: protein_coding
description:
  Phosphotransferase system, enzyme I, PtsI; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr).


ensembl_gene_id: SAMN04488076_10952
symbol: rpsD
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.


ensembl_gene_id: SAMN04488076_10953
symbol: ezrA
gene_biotype: protein_coding
description:
  Septation ring formation regulator; Negative regulator of FtsZ ring formation; modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization; Belongs to the EzrA family.


ensembl_gene_id: SAMN04488076_10955
symbol: thiI
gene_biotype: protein_coding
description:
  Thiamine biosynthesis protein ThiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS.


ensembl_gene_id: SAMN04488076_10956
symbol: SFK92307.1
gene_biotype: protein_coding
description:
  Thiol peroxidase, atypical 2-Cys peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.


ensembl_gene_id: SAMN04488076_10958
symbol: valS
gene_biotype: protein_coding
description:
  valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.


ensembl_gene_id: SAMN04488076_10959
symbol: SFK92340.1
gene_biotype: protein_coding
description:
  Dihydrofolate synthase / folylpolyglutamate synthase; Belongs to the folylpolyglutamate synthase family.


ensembl_gene_id: SAMN04488076_10960
symbol: SFK92356.1
gene_biotype: protein_coding
description:
  Uncharacterized protein; Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E.


ensembl_gene_id: SAMN04488076_10967
symbol: SFK92460.1
gene_biotype: protein_coding
description:
  Polar amino acid transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: SAMN04488076_10971
symbol: rplU
gene_biotype: protein_coding
description:
  LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.


ensembl_gene_id: SAMN04488076_10975
symbol: ackA
gene_biotype: protein_coding
description:
  Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.


ensembl_gene_id: SAMN04488076_10980
symbol: gshAB
gene_biotype: protein_coding
description:
  Glutamate-cysteine ligase /glutathione synthase; Synthesizes glutathione from L-glutamate and L-cysteine via gamma-L-glutamyl-L-cysteine; In the N-terminal section; belongs to the glutamate--cysteine ligase type 1 family. Type 2 subfamily.


ensembl_gene_id: SAMN04488076_10988
symbol: mnmA
gene_biotype: protein_coding
description:
  tRNA-specific 2-thiouridylase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.


ensembl_gene_id: SAMN04488076_10989
symbol: recD2
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease V alpha subunit; DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity; Belongs to the RecD family. RecD-like subfamily.


ensembl_gene_id: SAMN04488076_10993
symbol: alaS
gene_biotype: protein_coding
description:
  alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.


ensembl_gene_id: SAMN04488076_10994
symbol: SFK92840.1
gene_biotype: protein_coding
description:
  Putative holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.


ensembl_gene_id: SAMN04488076_10996
symbol: mltG
gene_biotype: protein_coding
description:
  UPF0755 protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family.


ensembl_gene_id: SAMN04488076_10998
symbol: greA
gene_biotype: protein_coding
description:
  Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.


ensembl_gene_id: SAMN04488076_11068
symbol: rbsK
gene_biotype: protein_coding
description:
  Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.


ensembl_gene_id: SAMN04488076_11070
symbol: rbsA
gene_biotype: protein_coding
description:
  Ribose transport system ATP-binding protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.


ensembl_gene_id: SAMN04488076_11071
symbol: SFK95061.1
gene_biotype: protein_coding
description:
  Ribose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: SAMN04488076_11112
symbol: metK
gene_biotype: protein_coding
description:
  Methionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.


ensembl_gene_id: SAMN04488076_11129
symbol: SFK96707.1
gene_biotype: protein_coding
description:
  Cysteine desulfurase / selenocysteine lyase; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: SAMN04488076_11171
symbol: SFK97346.1
gene_biotype: protein_coding
description:
  3-deoxy-D-arabinoheptulosonate-7-phosphate synthase; Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino- heptulosonate-7-phosphate (DAHP).


ensembl_gene_id: SAMN04488076_11189
symbol: SFK97583.1
gene_biotype: protein_coding
description:
  Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily.


ensembl_gene_id: SAMN04488076_1119
symbol: SFK96378.1
gene_biotype: protein_coding
description:
  Septum formation protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.


ensembl_gene_id: SAMN04488076_11190
symbol: SFK97593.1
gene_biotype: protein_coding
description:
  2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'-or 3'-nucleotidase, 5'-nucleotidase family; Belongs to the 5'-nucleotidase family.


ensembl_gene_id: SAMN04488076_11192
symbol: SFK97620.1
gene_biotype: protein_coding
description:
  4-nitrophenyl phosphatase; Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro; Belongs to the HAD-like hydrolase superfamily. NagD family.


ensembl_gene_id: SAMN04488076_1121
symbol: metE
gene_biotype: protein_coding
description:
  Methionine synthase (B12-independent); Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family.


ensembl_gene_id: SAMN04488076_1122
symbol: SFK98170.1
gene_biotype: protein_coding
description:
  5,10-methylenetetrahydrofolate reductase (NAD(P)); Belongs to the methylenetetrahydrofolate reductase family.


ensembl_gene_id: SAMN04488076_11220
symbol: SFK98452.1
gene_biotype: protein_coding
description:
  Armadillo-type fold; Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase.


ensembl_gene_id: SAMN04488076_11229
symbol: dbpA
gene_biotype: protein_coding
description:
  Superfamily II DNA and RNA helicase; DEAD-box RNA helicase involved in the assembly of the 50S ribosomal subunit. Has an RNA-dependent ATPase activity, which is specific for 23S rRNA, and a 3' to 5' RNA helicase activity that uses the energy of ATP hydrolysis to destabilize and unwind short rRNA duplexes.


ensembl_gene_id: SAMN04488076_11256
symbol: SFK99108.1
gene_biotype: protein_coding
description:
  Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.


ensembl_gene_id: SAMN04488076_11257
symbol: SFK99124.1
gene_biotype: protein_coding
description:
  Quinolinate synthetase; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.


ensembl_gene_id: SAMN04488076_11276
symbol: rlmN
gene_biotype: protein_coding
description:
  23S rRNA (adenine2503-C2)-methyltransferase; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family.


ensembl_gene_id: SAMN04488076_11328
symbol: rlmH
gene_biotype: protein_coding
description:
  23S rRNA (pseudouridine1915-N3)-methyltransferase; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.


ensembl_gene_id: SAMN04488076_11335
symbol: trpD
gene_biotype: protein_coding
description:
  Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).


ensembl_gene_id: SAMN04488076_11351
symbol: SFL00753.1
gene_biotype: protein_coding
description:
  Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.


ensembl_gene_id: SAMN04488076_11352
symbol: acpS
gene_biotype: protein_coding
description:
  Holo-[acyl-carrier protein] synthase; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family.


ensembl_gene_id: SAMN04488076_11353
symbol: cshA
gene_biotype: protein_coding
description:
  ATP-dependent RNA helicase DeaD; DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA-dependent ATPase activity; Belongs to the DEAD box helicase family. CshA subfamily.


ensembl_gene_id: SAMN04488076_11354
symbol: murF
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.


ensembl_gene_id: SAMN04488076_11362
symbol: rho
gene_biotype: protein_coding
description:
  Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.


ensembl_gene_id: SAMN04488076_11365
symbol: pyrG
gene_biotype: protein_coding
description:
  CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.


ensembl_gene_id: SAMN04488076_11366
symbol: rpoE
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit delta; Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; Belongs to the RpoE family.


ensembl_gene_id: SAMN04488076_11368
symbol: lipL
gene_biotype: protein_coding
description:
  octanoyl-[GcvH]:protein N-octanoyltransferase; Catalyzes the amidotransfer (transamidation) of the octanoyl moiety from octanoyl-GcvH to the lipoyl domain of the E2 subunit of lipoate-dependent enzymes; Belongs to the octanoyltransferase LipL family.


ensembl_gene_id: SAMN04488076_11372
symbol: SFL01059.1
gene_biotype: protein_coding
description:
  S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.


ensembl_gene_id: SAMN04488076_11378
symbol: metN
gene_biotype: protein_coding
description:
  D-methionine transport system ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.


ensembl_gene_id: SAMN04488076_11416
symbol: gpsA
gene_biotype: protein_coding
description:
  Glycerol 3-phosphate dehydrogenase (NAD(P)+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: SAMN04488076_11418
symbol: lgt
gene_biotype: protein_coding
description:
  Phosphatidylglycerol:prolipoprotein diacylglycerol transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.


ensembl_gene_id: SAMN04488076_11419
symbol: hprK
gene_biotype: protein_coding
description:
  Hpr(Ser) kinase/phosphatase; Catalyzes the ATP- as well as the pyrophosphate-dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK/P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P-Ser-HPr). The two antagonistic activities of HprK/P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable car [...]


ensembl_gene_id: SAMN04488076_11423
symbol: uvrA
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.


ensembl_gene_id: SAMN04488076_11426
symbol: pstB
gene_biotype: protein_coding
description:
  Phosphate transport system ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.


ensembl_gene_id: SAMN04488076_11428
symbol: SFL02250.1
gene_biotype: protein_coding
description:
  Phosphate transport system permease protein; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: SAMN04488076_11432
symbol: SFL02319.1
gene_biotype: protein_coding
description:
  Cell division transport system permease protein; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.


ensembl_gene_id: SAMN04488076_11433
symbol: ftsE
gene_biotype: protein_coding
description:
  Cell division transport system ATP-binding protein; Part of the ABC transporter FtsEX involved in cellular division.


ensembl_gene_id: SAMN04488076_11434
symbol: prfB
gene_biotype: protein_coding
description:
  Bacterial peptide chain release factor 2 (bRF-2); Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.


ensembl_gene_id: SAMN04488076_11435
symbol: secA
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane.


ensembl_gene_id: SAMN04488076_11436
symbol: hpf
gene_biotype: protein_coding
description:
  Ribosomal subunit interface protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.


ensembl_gene_id: SAMN04488076_1144
symbol: SFL01891.1
gene_biotype: protein_coding
description:
  Conserved hypothetical protein, cofD-related; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family.


ensembl_gene_id: SAMN04488076_11440
symbol: SFL02440.1
gene_biotype: protein_coding
description:
  2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family.


ensembl_gene_id: SAMN04488076_11441
symbol: murE
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan.


ensembl_gene_id: SAMN04488076_11445
symbol: nadE-2
gene_biotype: protein_coding
description:
  NAD+ synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source; Belongs to the NAD synthetase family.


ensembl_gene_id: SAMN04488076_11446
symbol: SFL02514.1
gene_biotype: protein_coding
description:
  Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family.


ensembl_gene_id: SAMN04488076_11452
symbol: groL
gene_biotype: protein_coding
description:
  Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.


ensembl_gene_id: SAMN04488076_11453
symbol: groS
gene_biotype: protein_coding
description:
  Chaperonin GroES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.


ensembl_gene_id: SAMN04488076_11456
symbol: rex
gene_biotype: protein_coding
description:
  Redox-sensing transcriptional repressor; Modulates transcription in response to changes in cellular NADH/NAD(+) redox state.


ensembl_gene_id: SAMN04488076_11459
symbol: tsaD
gene_biotype: protein_coding
description:
  N6-L-threonylcarbamoyladenine synthase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.


ensembl_gene_id: SAMN04488076_1146
symbol: glpK
gene_biotype: protein_coding
description:
  Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.


ensembl_gene_id: SAMN04488076_11469
symbol: proS
gene_biotype: protein_coding
description:
  prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro).


ensembl_gene_id: SAMN04488076_11471
symbol: fumC
gene_biotype: protein_coding
description:
  Fumarase, class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.


ensembl_gene_id: SAMN04488076_11512
symbol: SFL03752.1
gene_biotype: protein_coding
description:
  Phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: SAMN04488076_11513
symbol: nadK
gene_biotype: protein_coding
description:
  NAD+ kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.


ensembl_gene_id: SAMN04488076_11519
symbol: mecA
gene_biotype: protein_coding
description:
  Adapter protein MecA 1/2; Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis.


ensembl_gene_id: SAMN04488076_1152
symbol: prfC
gene_biotype: protein_coding
description:
  Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.


ensembl_gene_id: SAMN04488076_11520
symbol: spxA
gene_biotype: protein_coding
description:
  Regulatory protein spx; Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development- promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress. Belongs to the ArsC family. Spx subfamily.


ensembl_gene_id: SAMN04488076_11521
symbol: trpS
gene_biotype: protein_coding
description:
  tryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: SAMN04488076_11525
symbol: SFL03949.1
gene_biotype: protein_coding
description:
  Flavin containing amine oxidoreductase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.


ensembl_gene_id: SAMN04488076_11527
symbol: rplT
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.


ensembl_gene_id: SAMN04488076_11529
symbol: infC
gene_biotype: protein_coding
description:
  Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.


ensembl_gene_id: SAMN04488076_11532
symbol: SFL04049.1
gene_biotype: protein_coding
description:
  Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.


ensembl_gene_id: SAMN04488076_11533
symbol: SFL04062.1
gene_biotype: protein_coding
description:
  Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives.


ensembl_gene_id: SAMN04488076_11536
symbol: thrS
gene_biotype: protein_coding
description:
  threonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr).


ensembl_gene_id: SAMN04488076_11540
symbol: nrdR
gene_biotype: protein_coding
description:
  Transcriptional repressor NrdR; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family.


ensembl_gene_id: SAMN04488076_11541
symbol: coaE
gene_biotype: protein_coding
description:
  dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.


ensembl_gene_id: SAMN04488076_11542
symbol: mutM
gene_biotype: protein_coding
description:
  DNA-(apurinic or apyrimidinic site) lyase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates.


ensembl_gene_id: SAMN04488076_11543
symbol: polA
gene_biotype: protein_coding
description:
  DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.


ensembl_gene_id: SAMN04488076_11550
symbol: SFL04269.1
gene_biotype: protein_coding
description:
  tRNA-binding protein; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.


ensembl_gene_id: SAMN04488076_11554
symbol: trmB
gene_biotype: protein_coding
description:
  tRNA (guanine-N7-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.


ensembl_gene_id: SAMN04488076_11560
symbol: prsA
gene_biotype: protein_coding
description:
  Foldase protein PrsA; Plays a major role in protein secretion by helping the post- translocational extracellular folding of several secreted proteins.


ensembl_gene_id: SAMN04488076_11564
symbol: SFL04488.1
gene_biotype: protein_coding
description:
  UPF0342 protein Tpal_1480; Cell fate regulator YlbF, YheA/YmcA/DUF963 family (controls sporulation, competence, biofilm development); Belongs to the UPF0342 family.


ensembl_gene_id: SAMN04488076_11569
symbol: SFL04569.1
gene_biotype: protein_coding
description:
  tRNA (cytidine/uridine-2'-O-)-methyltransferase; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.


ensembl_gene_id: SAMN04488076_11573
symbol: panD
gene_biotype: protein_coding
description:
  L-aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.


ensembl_gene_id: SAMN04488076_11574
symbol: panC
gene_biotype: protein_coding
description:
  Pantoate--beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.


ensembl_gene_id: SAMN04488076_11575
symbol: panB
gene_biotype: protein_coding
description:
  Ketopantoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family.


ensembl_gene_id: SAMN04488076_11624
symbol: SFL05690.1
gene_biotype: protein_coding
description:
  [citrate (pro-3S)-lyase] ligase; Acetylation of prosthetic group (2-(5''-phosphoribosyl)-3'- dephosphocoenzyme-A) of the gamma subunit of citrate lyase.


ensembl_gene_id: SAMN04488076_11625
symbol: citD
gene_biotype: protein_coding
description:
  Citrate lyase subunit gamma (acyl carrier protein); Covalent carrier of the coenzyme of citrate lyase.


ensembl_gene_id: SAMN04488076_11636
symbol: queC
gene_biotype: protein_coding
description:
  7-cyano-7-deazaguanine synthase; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)).


ensembl_gene_id: SAMN04488076_11637
symbol: queF
gene_biotype: protein_coding
description:
  7-cyano-7-deazaguanine reductase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1). Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily.


ensembl_gene_id: SAMN04488076_11731
symbol: glmS
gene_biotype: protein_coding
description:
  Glucosamine--fructose-6-phosphate aminotransferase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.


ensembl_gene_id: SAMN04488076_11739
symbol: glmM
gene_biotype: protein_coding
description:
  Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.


ensembl_gene_id: SAMN04488076_11741
symbol: dacA
gene_biotype: protein_coding
description:
  Diadenylate cyclase; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria.


ensembl_gene_id: SAMN04488076_11748
symbol: SFL07785.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.


ensembl_gene_id: SAMN04488076_11754
symbol: metAA
gene_biotype: protein_coding
description:
  Homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family.


ensembl_gene_id: SAMN04488076_1179
symbol: SFL07069.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: SAMN04488076_11817
symbol: sbcD
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease I subunit D; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family.


ensembl_gene_id: SAMN04488076_11821
symbol: SFL08716.1
gene_biotype: protein_coding
description:
  Uncharacterized protein; Haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E.


ensembl_gene_id: SAMN04488076_11825
symbol: leuD
gene_biotype: protein_coding
description:
  3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily.


ensembl_gene_id: SAMN04488076_11826
symbol: leuC
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydratase, large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.


ensembl_gene_id: SAMN04488076_11827
symbol: leuB
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.


ensembl_gene_id: SAMN04488076_11828
symbol: leuA
gene_biotype: protein_coding
description:
  2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily.


ensembl_gene_id: SAMN04488076_11830
symbol: SFL08874.1
gene_biotype: protein_coding
description:
  Putative SOS response-associated peptidase YedK; Belongs to the SOS response-associated peptidase family.


ensembl_gene_id: SAMN04488076_11834
symbol: birA
gene_biotype: protein_coding
description:
  Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.


ensembl_gene_id: SAMN04488076_11841
symbol: SFL09066.1
gene_biotype: protein_coding
description:
  Glucose/ribitol dehydrogenase; 3-oxoacyl-[acyl-carrier protein] reductase/17beta-estradiol 17-dehydrogenase / 3alpha(17beta)-hydroxysteroid dehydrogenase (NAD+).


ensembl_gene_id: SAMN04488076_11845
symbol: SFL09145.1
gene_biotype: protein_coding
description:
  AraC family transcriptional regulator, regulatory protein of adaptative response / methylphosphotriester-DNA alkyltransferase methyltransferase.


ensembl_gene_id: SAMN04488076_11850
symbol: mntH
gene_biotype: protein_coding
description:
  Manganese transport protein; H(+)-stimulated, divalent metal cation uptake system. Belongs to the NRAMP family.


ensembl_gene_id: SAMN04488076_1188
symbol: ppk
gene_biotype: protein_coding
description:
  Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.


ensembl_gene_id: SAMN04488076_12015
symbol: ade
gene_biotype: protein_coding
description:
  Adenine deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family.


ensembl_gene_id: SAMN04488076_12113
symbol: SFL11783.1
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.


ensembl_gene_id: SAMN04488076_12121
symbol: nnrD
gene_biotype: protein_coding
description:
  NAD(P)H-hydrate epimerase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration.  Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of bot [...]


ensembl_gene_id: SAMN04488076_12126
symbol: gpmA
gene_biotype: protein_coding
description:
  2,3-bisphosphoglycerate-dependent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.


ensembl_gene_id: SAMN04488076_12127
symbol: trpA
gene_biotype: protein_coding
description:
  Tryptophan synthase, alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.


ensembl_gene_id: SAMN04488076_12128
symbol: trpB
gene_biotype: protein_coding
description:
  Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.


ensembl_gene_id: SAMN04488076_12219
symbol: nanE
gene_biotype: protein_coding
description:
  N-acylglucosamine-6-phosphate 2-epimerase; Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N- acetylglucosamine-6-phosphate (GlcNAc-6-P).


ensembl_gene_id: SAMN04488076_12221
symbol: sstT
gene_biotype: protein_coding
description:
  Serine/threonine transporter; Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system). Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: SAMN04488076_1226
symbol: SFL12501.1
gene_biotype: protein_coding
description:
  methylated-DNA-[protein]-cysteine S-methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated.


ensembl_gene_id: SAMN04488076_12310
symbol: fliQ
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.


ensembl_gene_id: SAMN04488076_12311
symbol: fliP
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.


ensembl_gene_id: SAMN04488076_12313
symbol: SFL13384.1
gene_biotype: protein_coding
description:
  Flagellar FliL protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.


ensembl_gene_id: SAMN04488076_12322
symbol: SFL13576.1
gene_biotype: protein_coding
description:
  Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.


ensembl_gene_id: SAMN04488076_12325
symbol: SFL13639.1
gene_biotype: protein_coding
description:
  Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.


ensembl_gene_id: SAMN04488076_12328
symbol: SFL13695.1
gene_biotype: protein_coding
description:
  Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.


ensembl_gene_id: SAMN04488076_12330
symbol: SFL13732.1
gene_biotype: protein_coding
description:
  Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.


ensembl_gene_id: SAMN04488076_1237
symbol: flhA
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.


ensembl_gene_id: SAMN04488076_1238
symbol: flhB
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family.


ensembl_gene_id: SAMN04488076_1239
symbol: SFL13302.1
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family.


ensembl_gene_id: SAMN04488076_1241
symbol: ppnP
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions.


ensembl_gene_id: SAMN04488076_12613
symbol: purN
gene_biotype: protein_coding
description:
  Phosphoribosylglycinamide formyltransferase-1; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.


ensembl_gene_id: SAMN04488076_12615
symbol: purF
gene_biotype: protein_coding
description:
  Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.


ensembl_gene_id: SAMN04488076_12616
symbol: purL
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to assist in  [...]


ensembl_gene_id: SAMN04488076_12621
symbol: purK-2
gene_biotype: protein_coding
description:
  5-(carboxyamino)imidazole ribonucleotide synthase; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR).


ensembl_gene_id: SAMN04488076_12622
symbol: purE
gene_biotype: protein_coding
description:
  5-(carboxyamino)imidazole ribonucleotide mutase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).


ensembl_gene_id: SAMN04488076_1264
symbol: thiE
gene_biotype: protein_coding
description:
  Thiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.


ensembl_gene_id: SAMN04488076_1265
symbol: thiM
gene_biotype: protein_coding
description:
  Hydroxyethylthiazole kinase; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family.


ensembl_gene_id: SAMN04488076_1267
symbol: mnmG
gene_biotype: protein_coding
description:
  tRNA uridine 5-carboxymethylaminomethyl modification enzyme; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.


ensembl_gene_id: SAMN04488076_1268
symbol: mnmE
gene_biotype: protein_coding
description:
  tRNA modification GTPase; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.


ensembl_gene_id: SAMN04488076_12716
symbol: nagB
gene_biotype: protein_coding
description:
  Glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion.


ensembl_gene_id: SAMN04488076_12812
symbol: SFL16916.1
gene_biotype: protein_coding
description:
  Guanine deaminase; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia; Belongs to the metallo-dependent hydrolases superfamily. ATZ/TRZ family.


ensembl_gene_id: SAMN04488076_1291
symbol: SFL17152.1
gene_biotype: protein_coding
description:
  Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.


ensembl_gene_id: SAMN04488076_12913
symbol: galK
gene_biotype: protein_coding
description:
  Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.


ensembl_gene_id: SAMN04488076_13011
symbol: allB
gene_biotype: protein_coding
description:
  Allantoinase; Catalyzes the conversion of allantoin (5-ureidohydantoin) to allantoic acid by hydrolytic cleavage of the five-member hydantoin ring; Belongs to the metallo-dependent hydrolases superfamily. Allantoinase family.


ensembl_gene_id: SAMN04488076_1311
symbol: tadA
gene_biotype: protein_coding
description:
  tRNA(adenine34) deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: SAMN04488076_13112
symbol: SFL18270.1
gene_biotype: protein_coding
description:
  Regulator of replication initiation timing; Involved in initiation control of chromosome replication. Belongs to the YabA family.


ensembl_gene_id: SAMN04488076_13115
symbol: rsmI
gene_biotype: protein_coding
description:
  16S rRNA (cytidine1402-2'-O)-methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.


ensembl_gene_id: SAMN04488076_13117
symbol: mscL
gene_biotype: protein_coding
description:
  Large conductance mechanosensitive channel; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell.


ensembl_gene_id: SAMN04488076_13119
symbol: proA
gene_biotype: protein_coding
description:
  Glutamate-5-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.


ensembl_gene_id: SAMN04488076_13120
symbol: proB
gene_biotype: protein_coding
description:
  Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.


ensembl_gene_id: SAMN04488076_13121
symbol: SFL18397.1
gene_biotype: protein_coding
description:
  Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily/HAD-superfamily hydrolase, subfamily IIB.


ensembl_gene_id: SAMN04488076_1314
symbol: dnaX
gene_biotype: protein_coding
description:
  DNA polymerase-3 subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: SAMN04488076_1315
symbol: SFL18161.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.


ensembl_gene_id: SAMN04488076_1316
symbol: recR
gene_biotype: protein_coding
description:
  DNA replication and repair protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.


ensembl_gene_id: SAMN04488076_1318
symbol: tmk
gene_biotype: protein_coding
description:
  dTMP kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.


ensembl_gene_id: SAMN04488076_13210
symbol: ychF
gene_biotype: protein_coding
description:
  Hypothetical protein; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.


ensembl_gene_id: SAMN04488076_13214
symbol: rsmG
gene_biotype: protein_coding
description:
  16S rRNA (guanine527-N7)-methyltransferase; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.


ensembl_gene_id: SAMN04488076_1322
symbol: msrA
gene_biotype: protein_coding
description:
  Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.


ensembl_gene_id: SAMN04488076_1323
symbol: serS
gene_biotype: protein_coding
description:
  seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).


ensembl_gene_id: SAMN04488076_1325
symbol: SFL18661.1
gene_biotype: protein_coding
description:
  D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family.


ensembl_gene_id: SAMN04488076_1328
symbol: guaB
gene_biotype: protein_coding
description:
  IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.


ensembl_gene_id: SAMN04488076_13310
symbol: SFL19233.1
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity.


ensembl_gene_id: SAMN04488076_13311
symbol: hisD
gene_biotype: protein_coding
description:
  Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.


ensembl_gene_id: SAMN04488076_13314
symbol: hisH
gene_biotype: protein_coding
description:
  Glutamine amidotransferase; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.


ensembl_gene_id: SAMN04488076_13315
symbol: hisA
gene_biotype: protein_coding
description:
  1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase.


ensembl_gene_id: SAMN04488076_13316
symbol: hisF
gene_biotype: protein_coding
description:
  Cyclase; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.


ensembl_gene_id: SAMN04488076_1332
symbol: aroD
gene_biotype: protein_coding
description:
  3-dehydroquinate dehydratase; Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis- dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3-dehydroshikimate. Belongs to the type-I 3-dehydroquinase family.


ensembl_gene_id: SAMN04488076_1347
symbol: uvrC
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.


ensembl_gene_id: SAMN04488076_13510
symbol: topB
gene_biotype: protein_coding
description:
  DNA topoisomerase-3; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]


ensembl_gene_id: SAMN04488076_1364
symbol: SFL20151.1
gene_biotype: protein_coding
description:
  Multicopper oxidases signature 2; Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA).


ensembl_gene_id: SAMN04488076_1383
symbol: SFL20727.1
gene_biotype: protein_coding
description:
  Ribonucleoside-diphosphate reductase class II; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen.


ensembl_gene_id: SAMN04488076_1454
symbol: SFL22335.1
gene_biotype: protein_coding
description:
  Peptidyl-prolyl cis-trans isomerase B (cyclophilin B); PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.


ensembl_gene_id: SAMN04488076_1472
symbol: trpE
gene_biotype: protein_coding
description:
  Anthranilate synthase component 1; Part of a heterotetrameric complex that catalyzes the two- step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine-binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentr [...]


# pathwayInfo

id: CL:1017
description: L28p-like, and Large ribosomal subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1017_L28p-like,_and_Large_ribosomal_subunit


id: CL:1042
description: Large ribosomal subunit, and Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1042_Large_ribosomal_subunit,_and_Structural_constituent_of_ribosome


id: CL:1044
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1044_Structural_constituent_of_ribosome


id: CL:1045
description: Mixed, incl. Large ribosomal subunit, and KOW (Kyprides, Ouzounis, Woese) motif.
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1045_Mixed,_incl._Large_ribosomal_subunit,_and_KOW_(Kyprides,_Ouzounis,_Woese)_motif.


id: CL:1056
description: Mixed, incl. Nucleotide-binding alpha-beta plait domain superfamily, and Large ribosomal subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1056_Mixed,_incl._Nucleotide-binding_alpha-beta_plait_domain_superfamily,_and_Large_ribosomal_subunit


id: CL:111
description: Mixed, incl. Conserved carboxylase domain, and Malic oxidoreductase
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:111_Mixed,_incl._Conserved_carboxylase_domain,_and_Malic_oxidoreductase


id: CL:1114
description: Ribosomal small subunit biogenesis, and Initiation factor
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1114_Ribosomal_small_subunit_biogenesis,_and_Initiation_factor


id: CL:1140
description: RNA polymerase, and PLD-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1140_RNA_polymerase,_and_PLD-like_domain


id: CL:1161
description: Translocation, and SRP54-type protein, GTPase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1161_Translocation,_and_SRP54-type_protein,_GTPase_domain


id: CL:1177
description: Signal peptidase, peptidase S26 , and Ribonuclease HII
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1177_Signal_peptidase,_peptidase_S26_,_and_Ribonuclease_HII


id: CL:1191
description: Aminoacyl-tRNA biosynthesis, and Nucleotide excision repair
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1191_Aminoacyl-tRNA_biosynthesis,_and_Nucleotide_excision_repair


id: CL:1198
description: Aminoacyl-tRNA synthetase, class Ia, anticodon-binding, and GMP biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1198_Aminoacyl-tRNA_synthetase,_class_Ia,_anticodon-binding,_and_GMP_biosynthesis


id: CL:1236
description: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1236_glutaminyl-tRNA_synthase_(glutamine-hydrolyzing)_activity


id: CL:1250
description: Mixed, incl. RNA helicase activity, and Pseudouridine synthase, RluC/RluD
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1250_Mixed,_incl._RNA_helicase_activity,_and_Pseudouridine_synthase,_RluC/RluD


id: CL:1252
description: RNA helicase activity, and NUDIX domain
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1252_RNA_helicase_activity,_and_NUDIX_domain


id: CL:1279
description: Mixed, incl. RelA/SpoT, and MnmG, N-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1279_Mixed,_incl._RelA/SpoT,_and_MnmG,_N-terminal_domain


id: CL:128
description: C-acyltransferase activity, and Taurine and hypotaurine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:128_C-acyltransferase_activity,_and_Taurine_and_hypotaurine_metabolism


id: CL:1297
description: tRNA modification, and Radical SAM, alpha/beta horseshoe
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1297_tRNA_modification,_and_Radical_SAM,_alpha/beta_horseshoe


id: CL:1298
description: Mixed, incl. tRNA pseudouridine synthesis, and Methyltransferase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1298_Mixed,_incl._tRNA_pseudouridine_synthesis,_and_Methyltransferase_complex


id: CL:1300
description: tRNA pseudouridine synthesis, and Heme
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1300_tRNA_pseudouridine_synthesis,_and_Heme


id: CL:1321
description: Mixed, incl. NusB family, and PASTA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1321_Mixed,_incl._NusB_family,_and_PASTA_domain


id: CL:1332
description: Mixed, incl. Glycerolipid biosynthetic process, and Response to antibiotic
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1332_Mixed,_incl._Glycerolipid_biosynthetic_process,_and_Response_to_antibiotic


id: CL:1334
description: Mixed, incl. PDZ domain 6, and Cytidylyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1334_Mixed,_incl._PDZ_domain_6,_and_Cytidylyltransferase_activity


id: CL:1346
description: Phosphatidylglycerol metabolic process, and Metalloexopeptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1346_Phosphatidylglycerol_metabolic_process,_and_Metalloexopeptidase_activity


id: CL:1358
description: Oxidative phosphorylation, and Cation/H+ exchanger
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1358_Oxidative_phosphorylation,_and_Cation/H+_exchanger


id: CL:1360
description: Proton-transporting two-sector ATPase complex, and Cation transporter/ATPase, N-terminus
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1360_Proton-transporting_two-sector_ATPase_complex,_and_Cation_transporter/ATPase,_N-terminus


id: CL:1362
description: Proton-transporting two-sector ATPase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1362_Proton-transporting_two-sector_ATPase_complex


id: CL:1382
description: ATPase-coupled ion transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1382_ATPase-coupled_ion_transmembrane_transporter_activity


id: CL:140
description: Branched-chain amino acid biosynthesis, and L-serine biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:140_Branched-chain_amino_acid_biosynthesis,_and_L-serine_biosynthetic_process


id: CL:1402
description: Cation transporter/ATPase, N-terminus, and Cation/H+ exchanger
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1402_Cation_transporter/ATPase,_N-terminus,_and_Cation/H+_exchanger


id: CL:141
description: Valine, leucine and isoleucine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:141_Valine,_leucine_and_isoleucine_biosynthesis


id: CL:1422
description: Catalytic activity, acting on DNA, and DNA replication
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1422_Catalytic_activity,_acting_on_DNA,_and_DNA_replication


id: CL:1423
description: Catalytic activity, acting on DNA, and DNA replication
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1423_Catalytic_activity,_acting_on_DNA,_and_DNA_replication


id: CL:1424
description: Mixed, incl. Homologous recombination, and Chromosome
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1424_Mixed,_incl._Homologous_recombination,_and_Chromosome


id: CL:1425
description: DNA conformation change, and SOS response
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1425_DNA_conformation_change,_and_SOS_response


id: CL:1426
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1426_Mixed,_incl._SOS_response,_and_Topoisomerases,_DnaG-type_primases,_OLD_family_nucleases_and_RecR_proteins

description:
  Mixed, incl. SOS response, and Topoisomerases, DnaG-type primases, OLD family nucleases and RecR proteins


id: CL:1428
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1428_Endodeoxyribonuclease_complex,_and_ATP-dependent_DNA_helicase_RecG/Transcription-repair-coupling_factor

description:
  Endodeoxyribonuclease complex, and ATP-dependent DNA helicase RecG/Transcription-repair-coupling factor


id: CL:1429
description: Mixed, incl. Holliday junction helicase complex, and Sigma-70 region 3
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1429_Mixed,_incl._Holliday_junction_helicase_complex,_and_Sigma-70_region_3


id: CL:144
description: Leucine biosynthesis, and Valine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:144_Leucine_biosynthesis,_and_Valine_metabolic_process


id: CL:1456
description: Mixed, incl. DNA topoisomerase, type IA, and HRDC domain
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1456_Mixed,_incl._DNA_topoisomerase,_type_IA,_and_HRDC_domain


id: CL:1459
description: HRDC domain, and DNA topoisomerase, type IA, zn finger
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1459_HRDC_domain,_and_DNA_topoisomerase,_type_IA,_zn_finger


id: CL:1475
description: DNA topoisomerase, type IIA-like domain superfamily, and DNA replication
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1475_DNA_topoisomerase,_type_IIA-like_domain_superfamily,_and_DNA_replication


id: CL:1477
description: Mixed, incl. DNA topoisomerase, type IIA-like domain superfamily, and AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1477_Mixed,_incl._DNA_topoisomerase,_type_IIA-like_domain_superfamily,_and_AAA_domain


id: CL:1496
description: Mixed, incl. DNA polymerase activity, and Single-stranded DNA-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1496_Mixed,_incl._DNA_polymerase_activity,_and_Single-stranded_DNA-binding_protein


id: CL:1497
description: DNA polymerase activity, and Single-stranded DNA-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1497_DNA_polymerase_activity,_and_Single-stranded_DNA-binding_protein


id: CL:1501
description: DNA polymerase complex, and Helix-hairpin-helix motif
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1501_DNA_polymerase_complex,_and_Helix-hairpin-helix_motif


id: CL:1518
description: DNA-templated DNA replication, and ATP cone domain
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1518_DNA-templated_DNA_replication,_and_ATP_cone_domain


id: CL:1530
description: Mismatch repair, and YheA/YmcA-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1530_Mismatch_repair,_and_YheA/YmcA-like_domain_superfamily


id: CL:1560
description: Isoprene biosynthesis, and rRNA (adenine) methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1560_Isoprene_biosynthesis,_and_rRNA_(adenine)_methyltransferase_activity


id: CL:1570
description: Mixed, incl. Pseudouridine synthase, RsuA/RluB/E/F, and Chromosome segregation
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1570_Mixed,_incl._Pseudouridine_synthase,_RsuA/RluB/E/F,_and_Chromosome_segregation


id: CL:1572
description: Mixed, incl. Pseudouridine synthase, RsuA/RluB/E/F, and Chromosome partition
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1572_Mixed,_incl._Pseudouridine_synthase,_RsuA/RluB/E/F,_and_Chromosome_partition


id: CL:1595
description: Mixed, incl. Stress response, and TRAM domain
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1595_Mixed,_incl._Stress_response,_and_TRAM_domain


id: CL:1596
description: Mixed, incl. Tetrapyrrole methylase, and Peptidoglycan biosynthesis protein, SpoVB-type
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1596_Mixed,_incl._Tetrapyrrole_methylase,_and_Peptidoglycan_biosynthesis_protein,_SpoVB-type


id: CL:1608
description: Mixed, incl. TRAM domain, and Ribonuclease III family
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1608_Mixed,_incl._TRAM_domain,_and_Ribonuclease_III_family


id: CL:1618
description: Nuclease-related domain, and Single-stranded DNA-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1618_Nuclease-related_domain,_and_Single-stranded_DNA-binding_protein


id: CL:1627
description: Lipopolysaccharide metabolic process, and OBG-type guanine nucleotide-binding (G) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1627_Lipopolysaccharide_metabolic_process,_and_OBG-type_guanine_nucleotide-binding_(G)_domain


id: CL:1636
description: Mixed, incl. Horizontal gene transfer, and DNA catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1636_Mixed,_incl._Horizontal_gene_transfer,_and_DNA_catabolic_process


id: CL:1638
description: Mixed, incl. DNA catabolic process, and NusB family
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1638_Mixed,_incl._DNA_catabolic_process,_and_NusB_family


id: CL:1640
description: Mixed, incl. RecF/RecN/SMC N terminal domain, and Glycerophosphodiester phosphodiesterase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1640_Mixed,_incl._RecF/RecN/SMC_N_terminal_domain,_and_Glycerophosphodiester_phosphodiesterase_domain


id: CL:1662
description: Horizontal gene transfer, and DNA replication initiation
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1662_Horizontal_gene_transfer,_and_DNA_replication_initiation


id: CL:1664
description: Establishment of competence for transformation
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1664_Establishment_of_competence_for_transformation


id: CL:167
description: L-serine ammonia-lyase activity, and Threonine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:167_L-serine_ammonia-lyase_activity,_and_Threonine_biosynthesis


id: CL:1676
description: Horizontal gene transfer, and DNA replication initiation
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1676_Horizontal_gene_transfer,_and_DNA_replication_initiation


id: CL:1687
description: Mixed, incl. ADP binding, and glycyl-tRNA aminoacylation
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1687_Mixed,_incl._ADP_binding,_and_glycyl-tRNA_aminoacylation


id: CL:1689
description: Mixed, incl. glycyl-tRNA aminoacylation, and ADP binding
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1689_Mixed,_incl._glycyl-tRNA_aminoacylation,_and_ADP_binding


id: CL:1691
description: Mixed, incl. K Homology domain, type 2, and K homology RNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1691_Mixed,_incl._K_Homology_domain,_type_2,_and_K_homology_RNA-binding_domain


id: CL:1715
description: Mixed, incl. Threonine/Serine exporter, ThrE, and ADP binding
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1715_Mixed,_incl._Threonine/Serine_exporter,_ThrE,_and_ADP_binding


id: CL:1727
description: Mixed, incl. Bacterial nucleoid, and DUF218 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1727_Mixed,_incl._Bacterial_nucleoid,_and_DUF218_domain


id: CL:1728
description: Bacterial nucleoid, and K Homology domain, type 1
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1728_Bacterial_nucleoid,_and_K_Homology_domain,_type_1


id: CL:1737
description: Mixed, incl. DUF218 domain, and Tetrapyrrole methylase
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1737_Mixed,_incl._DUF218_domain,_and_Tetrapyrrole_methylase


id: CL:1747
description: Mixed, incl. Nicotinate and nicotinamide metabolism, and Riboflavin metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1747_Mixed,_incl._Nicotinate_and_nicotinamide_metabolism,_and_Riboflavin_metabolic_process


id: CL:1749
description: Mixed, incl. Nicotinate and nicotinamide metabolism, and NUDIX domain
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1749_Mixed,_incl._Nicotinate_and_nicotinamide_metabolism,_and_NUDIX_domain


id: CL:1750
description: Nicotinamide nucleotide metabolic process, and NUDIX domain
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1750_Nicotinamide_nucleotide_metabolic_process,_and_NUDIX_domain


id: CL:1752
description: Nicotinamide nucleotide metabolic process, and NUDIX hydrolase, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1752_Nicotinamide_nucleotide_metabolic_process,_and_NUDIX_hydrolase,_conserved_site


id: CL:1757
description: Mixed, incl. NAD synthase, and NAD metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1757_Mixed,_incl._NAD_synthase,_and_NAD_metabolic_process


id: CL:1790
description: Mixed, incl. Cytidylyltransferase-like, and Ribosome assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1790_Mixed,_incl._Cytidylyltransferase-like,_and_Ribosome_assembly


id: CL:1794
description: Ribosome assembly, and Regulation of DNA replication
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1794_Ribosome_assembly,_and_Regulation_of_DNA_replication


id: CL:181
description: Mixed, incl. Glycine metabolic process, and Glutamine family amino acid biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:181_Mixed,_incl._Glycine_metabolic_process,_and_Glutamine_family_amino_acid_biosynthetic_process


id: CL:1819
description: Mixed, incl. Riboflavin metabolic process, and Queuosine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1819_Mixed,_incl._Riboflavin_metabolic_process,_and_Queuosine_metabolic_process


id: CL:1828
description: Riboflavin biosynthesis, and ATP synthase subunit alpha, N-terminal domain-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1828_Riboflavin_biosynthesis,_and_ATP_synthase_subunit_alpha,_N-terminal_domain-like_superfamily


id: CL:183
description: Glycine metabolic process, and Tetrahydrofolate interconversion
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:183_Glycine_metabolic_process,_and_Tetrahydrofolate_interconversion


id: CL:1857
description: Queuosine metabolic process, and Tetrahydrofolate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1857_Queuosine_metabolic_process,_and_Tetrahydrofolate_biosynthetic_process


id: CL:1874
description: Tetrahydrofolate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1874_Tetrahydrofolate_biosynthetic_process


id: CL:1884
description: Mixed, incl. Pfam phage integrase family, and Peptidase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1884_Mixed,_incl._Pfam_phage_integrase_family,_and_Peptidase_complex


id: CL:1887
description: Peptidase complex, and DNA integration
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1887_Peptidase_complex,_and_DNA_integration


id: CL:1906
description: Mixed, incl. Cell division, and Hydrolase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1906_Mixed,_incl._Cell_division,_and_Hydrolase_activity


id: CL:1907
description: Mixed, incl. Cell division, and Hydrolase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1907_Mixed,_incl._Cell_division,_and_Hydrolase_activity


id: CL:1908
description: Mixed, incl. Regulation of developmental process, and Cell division
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1908_Mixed,_incl._Regulation_of_developmental_process,_and_Cell_division


id: CL:1909
description: Mixed, incl. Regulation of cell shape, and Cell division
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1909_Mixed,_incl._Regulation_of_cell_shape,_and_Cell_division


id: CL:1910
description: Mixed, incl. Cell division, and Peptidoglycan biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1910_Mixed,_incl._Cell_division,_and_Peptidoglycan_biosynthesis


id: CL:1911
description: Regulation of cell shape, and Reproduction
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1911_Regulation_of_cell_shape,_and_Reproduction


id: CL:1912
description: Regulation of cell shape, and Carboxypeptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1912_Regulation_of_cell_shape,_and_Carboxypeptidase_activity


id: CL:1913
description: Peptidoglycan biosynthesis, and Cell cycle protein
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1913_Peptidoglycan_biosynthesis,_and_Cell_cycle_protein


id: CL:1918
description: Mur ligase, C-terminal, and Glycosyl transferase family 4
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1918_Mur_ligase,_C-terminal,_and_Glycosyl_transferase_family_4


id: CL:1940
description: Penicillin binding, and Cell cycle protein
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1940_Penicillin_binding,_and_Cell_cycle_protein


id: CL:1960
description: Actin, and Regulation of cell shape
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1960_Actin,_and_Regulation_of_cell_shape


id: CL:1969
description: Mixed, incl. Reproduction, and DivIVA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1969_Mixed,_incl._Reproduction,_and_DivIVA_domain


id: CL:197
description: One-carbon metabolism, and dTTP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:197_One-carbon_metabolism,_and_dTTP_biosynthetic_process


id: CL:1983
description: Septum formation initiator, and rRNA (cytosine) methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1983_Septum_formation_initiator,_and_rRNA_(cytosine)_methyltransferase_activity


id: CL:1992
description: Mixed, incl. Lysin motif, and Cationic antimicrobial peptide (CAMP) resistance
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1992_Mixed,_incl._Lysin_motif,_and_Cationic_antimicrobial_peptide_(CAMP)_resistance


id: CL:1993
description: Mixed, incl. Lysin motif, and Cationic antimicrobial peptide (CAMP) resistance
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1993_Mixed,_incl._Lysin_motif,_and_Cationic_antimicrobial_peptide_(CAMP)_resistance


id: CL:1994
description: Mixed, incl. Lysin motif, and Cationic antimicrobial peptide (CAMP) resistance
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1994_Mixed,_incl._Lysin_motif,_and_Cationic_antimicrobial_peptide_(CAMP)_resistance


id: CL:1995
description: Mixed, incl. Polysaccharide deacetylase, and Serine protease
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1995_Mixed,_incl._Polysaccharide_deacetylase,_and_Serine_protease


id: CL:1998
description: Polysaccharide deacetylase, and PDZ domain 6
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:1998_Polysaccharide_deacetylase,_and_PDZ_domain_6


id: CL:2020
description: Mixed, incl. Lysin motif, and Ami_3
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2020_Mixed,_incl._Lysin_motif,_and_Ami_3


id: CL:2043
description: Cell division protein FtsE, ATP-binding, and Peptidase M23
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2043_Cell_division_protein_FtsE,_ATP-binding,_and_Peptidase_M23


id: CL:2053
description: Mixed, incl. GGDEF domain, and Cell aggregation
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2053_Mixed,_incl._GGDEF_domain,_and_Cell_aggregation


id: CL:2066
description: Mixed, incl. Magnesium transporter MgtE, and Asp/Glu racemase
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2066_Mixed,_incl._Magnesium_transporter_MgtE,_and_Asp/Glu_racemase


id: CL:2082
description: LytR_cpsA_psr family, and Ribonuclease J
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2082_LytR_cpsA_psr_family,_and_Ribonuclease_J


id: CL:2084
description: LytR_cpsA_psr family, and Regulation of RNA stability
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2084_LytR_cpsA_psr_family,_and_Regulation_of_RNA_stability


id: CL:2101
description: Mixed, incl. Integral component of membrane, and Thioredoxin-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2101_Mixed,_incl._Integral_component_of_membrane,_and_Thioredoxin-like_superfamily


id: CL:2102
description: Mixed, incl. Thioredoxin-like superfamily, and Integral component of membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2102_Mixed,_incl._Thioredoxin-like_superfamily,_and_Integral_component_of_membrane


id: CL:2103
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2103_Mostly_uncharacterized,_incl._Thioredoxin-like_superfamily,_and_Establishment_of_competence_for_transformation

description:
  Mostly uncharacterized, incl. Thioredoxin-like superfamily, and Establishment of competence for transformation


id: CL:2104
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2104_Mostly_uncharacterized,_incl._Thioredoxin-like_superfamily,_and_Establishment_of_competence_for_transformation

description:
  Mostly uncharacterized, incl. Thioredoxin-like superfamily, and Establishment of competence for transformation


id: CL:2106
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2106_Mostly_uncharacterized,_incl._Establishment_of_competence_for_transformation,_and_Identical_protein_binding

description:
  Mostly uncharacterized, incl. Establishment of competence for transformation, and Identical protein binding


id: CL:2107
description: Mostly uncharacterized, incl. Ribonuclease HII, and Sulfatase, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2107_Mostly_uncharacterized,_incl._Ribonuclease_HII,_and_Sulfatase,_N-terminal


id: CL:2109
description: Mostly uncharacterized, incl. Sulfatase, N-terminal, and DNA methylase, adenine-specific
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2109_Mostly_uncharacterized,_incl._Sulfatase,_N-terminal,_and_DNA_methylase,_adenine-specific


id: CL:211
description: Glutamine family amino acid biosynthetic process, and Carbon-nitrogen hydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:211_Glutamine_family_amino_acid_biosynthetic_process,_and_Carbon-nitrogen_hydrolase


id: CL:2111
description: Mixed, incl. Sulfatase, N-terminal, and DNA methylase, adenine-specific
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2111_Mixed,_incl._Sulfatase,_N-terminal,_and_DNA_methylase,_adenine-specific


id: CL:213
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:213_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_NAD_or_NADP_as_acceptor,_and_Carbon-nitrogen_hydrolase

description:
  Oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor, and Carbon-nitrogen hydrolase


id: CL:2141
description: Mostly uncharacterized, incl. TPR repeat, and Cytidylyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2141_Mostly_uncharacterized,_incl._TPR_repeat,_and_Cytidylyltransferase_activity


id: CL:2143
description: Mixed, incl. TPR repeat, and Cytidylyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2143_Mixed,_incl._TPR_repeat,_and_Cytidylyltransferase_activity


id: CL:2174
description: Mixed, incl. ArsC family, and Thioredoxin-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2174_Mixed,_incl._ArsC_family,_and_Thioredoxin-like_superfamily


id: CL:2188
description: Mixed, incl. CAP superfamily, and Conserved hypothetical protein 95
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2188_Mixed,_incl._CAP_superfamily,_and_Conserved_hypothetical_protein_95


id: CL:2203
description: Mostly uncharacterized, incl. YtxH-like protein, and HIT domain
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2203_Mostly_uncharacterized,_incl._YtxH-like_protein,_and_HIT_domain


id: CL:2204
description: Mixed, incl. YtxH-like protein, and HIT domain
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2204_Mixed,_incl._YtxH-like_protein,_and_HIT_domain


id: CL:2206
description: Mixed, incl. Pyrimidine-containing compound transmembrane transport, and YtxH-like protein
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2206_Mixed,_incl._Pyrimidine-containing_compound_transmembrane_transport,_and_YtxH-like_protein


id: CL:2227
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2227_Mixed,_incl._Protein_dimerization_activity,_and_Signal_transduction_response_regulator,_C-terminal_effector

description:
  Mixed, incl. Protein dimerization activity, and Signal transduction response regulator, C-terminal effector


id: CL:2229
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2229_Mixed,_incl._Protein_dimerization_activity,_and_Signal_transduction_response_regulator,_C-terminal_effector

description:
  Mixed, incl. Protein dimerization activity, and Signal transduction response regulator, C-terminal effector


id: CL:2251
description: Mixed, incl. Bacterial membrane protein YfhO, and mRNA catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2251_Mixed,_incl._Bacterial_membrane_protein_YfhO,_and_mRNA_catabolic_process


id: CL:2252
description: Mixed, incl. mRNA catabolic process, and RecQ zinc-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2252_Mixed,_incl._mRNA_catabolic_process,_and_RecQ_zinc-binding


id: CL:2254
description: Mixed, incl. RecQ zinc-binding, and Helix-turn-helix domain
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2254_Mixed,_incl._RecQ_zinc-binding,_and_Helix-turn-helix_domain


id: CL:2266
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2266_Mixed,_incl._Pyrroline-5-carboxylate_reductase,_catalytic,_N-terminal,_and_Protein_kinase-like_domain_superfamily

description:
  Mixed, incl. Pyrroline-5-carboxylate reductase, catalytic, N-terminal, and Protein kinase-like domain superfamily


id: CL:2275
description: Bacterial membrane protein YfhO, and Glycosyltransferase like family 2
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2275_Bacterial_membrane_protein_YfhO,_and_Glycosyltransferase_like_family_2


id: CL:2285
description: Lipoic acid metabolism, and tRNA 3-trailer cleavage
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2285_Lipoic_acid_metabolism,_and_tRNA_3-trailer_cleavage


id: CL:2303
description: Mixed, incl. CNNM, transmembrane domain, and Calcineurin-like phosphoesterase
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2303_Mixed,_incl._CNNM,_transmembrane_domain,_and_Calcineurin-like_phosphoesterase


id: CL:2304
description: Mixed, incl. CNNM, transmembrane domain, and Domain of unknown function DUF1232
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2304_Mixed,_incl._CNNM,_transmembrane_domain,_and_Domain_of_unknown_function_DUF1232


id: CL:2307
description: Mixed, incl. Aminobenzoate degradation, and Calcineurin-like phosphoesterase
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2307_Mixed,_incl._Aminobenzoate_degradation,_and_Calcineurin-like_phosphoesterase


id: CL:232
description: Mixed, incl. Fatty acid biosynthesis, and NAD(P)-binding domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:232_Mixed,_incl._Fatty_acid_biosynthesis,_and_NAD(P)-binding_domain_superfamily


id: CL:2323
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2323_Mixed,_incl._YqgF/RNase_H-like_domain,_and_HPr(Ser)_kinase/phosphorylase-like,_N-terminal_domain_superfamily

description:
  Mixed, incl. YqgF/RNase H-like domain, and HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily


id: CL:2338
description: Mixed, incl. UDP-N-acetylglucosamine metabolic process, and Peptidase M41
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2338_Mixed,_incl._UDP-N-acetylglucosamine_metabolic_process,_and_Peptidase_M41


id: CL:234
description: Mixed, incl. Short-chain dehydrogenase/reductase SDR, and Alcohol dehydrogenase-like, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:234_Mixed,_incl._Short-chain_dehydrogenase/reductase_SDR,_and_Alcohol_dehydrogenase-like,_C-terminal


id: CL:2340
description: UDP-N-acetylglucosamine metabolic process, and Peptidase M41
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2340_UDP-N-acetylglucosamine_metabolic_process,_and_Peptidase_M41


id: CL:235
description: Short-chain dehydrogenase/reductase SDR, and Alcohol dehydrogenase-like, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:235_Short-chain_dehydrogenase/reductase_SDR,_and_Alcohol_dehydrogenase-like,_C-terminal


id: CL:236
description: Short-chain dehydrogenase/reductase SDR, and D-glucosamine PTS permease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:236_Short-chain_dehydrogenase/reductase_SDR,_and_D-glucosamine_PTS_permease_activity


id: CL:2361
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2361_Mixed,_incl._Glyoxalase/Bleomycin_resistance_protein/Dihydroxybiphenyl_dioxygenase,_and_Nitroreductase

description:
  Mixed, incl. Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase, and Nitroreductase


id: CL:2362
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2362_Mixed,_incl._Glyoxalase/Bleomycin_resistance_protein/Dihydroxybiphenyl_dioxygenase,_and_Nitroreductase

description:
  Mixed, incl. Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase, and Nitroreductase


id: CL:2364
description: Mixed, incl. Vicinal oxygen chelate (VOC) domain, and Nitroreductase
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2364_Mixed,_incl._Vicinal_oxygen_chelate_(VOC)_domain,_and_Nitroreductase


id: CL:2365
description: Mixed, incl. Vicinal oxygen chelate (VOC) domain, and Nitroreductase
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2365_Mixed,_incl._Vicinal_oxygen_chelate_(VOC)_domain,_and_Nitroreductase


id: CL:2367
description: Vicinal oxygen chelate (VOC) domain, and Nitroreductase
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2367_Vicinal_oxygen_chelate_(VOC)_domain,_and_Nitroreductase


id: CL:2369
description: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily, and Dienelactone hydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2369_Glyoxalase/Bleomycin_resistance_protein/Dioxygenase_superfamily,_and_Dienelactone_hydrolase


id: CL:237
description: Short-chain dehydrogenase/reductase SDR, and D-glucosamine PTS permease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:237_Short-chain_dehydrogenase/reductase_SDR,_and_D-glucosamine_PTS_permease_activity


id: CL:2382
description: Nitroreductase, and Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2382_Nitroreductase,_and_Glyoxalase/Bleomycin_resistance_protein/Dioxygenase_superfamily


id: CL:2395
description: Mixed, incl. Monooxygenase, and Aquaporin-like
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2395_Mixed,_incl._Monooxygenase,_and_Aquaporin-like


id: CL:2404
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2404_Mixed,_incl._Prolyl_oligopeptidase_family,_and_Glyoxalase/Bleomycin_resistance_protein/Dioxygenase_superfamily

description:
  Mixed, incl. Prolyl oligopeptidase family, and Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily


id: CL:2416
description: Dioxygenase, and Cyclase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2416_Dioxygenase,_and_Cyclase_activity


id: CL:2427
description: Mostly uncharacterized, incl. tRNA-splicing ligase RtcB, and Alpha/beta hydrolase fold-1
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2427_Mostly_uncharacterized,_incl._tRNA-splicing_ligase_RtcB,_and_Alpha/beta_hydrolase_fold-1


id: CL:2429
description: Mixed, incl. Alpha/beta hydrolase fold-1, and Protein tyrosine phosphatase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2429_Mixed,_incl._Alpha/beta_hydrolase_fold-1,_and_Protein_tyrosine_phosphatase_activity


id: CL:2458
description: Mixed, incl. Phosphotransferase system (PTS), and Pentose phosphate pathway
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2458_Mixed,_incl._Phosphotransferase_system_(PTS),_and_Pentose_phosphate_pathway


id: CL:2459
description: Mixed, incl. Phosphotransferase system (PTS), and Pentose phosphate pathway
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2459_Mixed,_incl._Phosphotransferase_system_(PTS),_and_Pentose_phosphate_pathway


id: CL:2460
description: Mixed, incl. Phosphotransferase system (PTS), and Pentose phosphate pathway
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2460_Mixed,_incl._Phosphotransferase_system_(PTS),_and_Pentose_phosphate_pathway


id: CL:2461
description: Mixed, incl. Pentose phosphate pathway, and Phosphotransferase system
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2461_Mixed,_incl._Pentose_phosphate_pathway,_and_Phosphotransferase_system


id: CL:2462
description: Mixed, incl. Pentose phosphate pathway, and Phosphotransferase system
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2462_Mixed,_incl._Pentose_phosphate_pathway,_and_Phosphotransferase_system


id: CL:2463
description: Generation of precursor metabolites and energy, and Phosphotransferase system
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2463_Generation_of_precursor_metabolites_and_energy,_and_Phosphotransferase_system


id: CL:2464
description: Mixed, incl. Phosphotransferase system, and ROK family
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2464_Mixed,_incl._Phosphotransferase_system,_and_ROK_family


id: CL:2466
description: Phosphotransferase system, and ROK family
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2466_Phosphotransferase_system,_and_ROK_family


id: CL:2469
description: Phosphotransferase system, and ROK family
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2469_Phosphotransferase_system,_and_ROK_family


id: CL:2471
description: Phosphotransferase system, and ROK family
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2471_Phosphotransferase_system,_and_ROK_family


id: CL:2478
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2478_Phosphotransferase_system,_sugar-specific_permease_EIIA_type_1,_and_Monosaccharide_transmembrane_transport

description:
  Phosphotransferase system, sugar-specific permease EIIA type 1, and Monosaccharide transmembrane transport


id: CL:2530
description: Mixed, incl. Phosphoglucosamine mutase activity, and N-acetylglucosamine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2530_Mixed,_incl._Phosphoglucosamine_mutase_activity,_and_N-acetylglucosamine_metabolic_process


id: CL:2543
description: Generation of precursor metabolites and energy
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2543_Generation_of_precursor_metabolites_and_energy


id: CL:2545
description: Glycolytic process, and NADPH regeneration
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2545_Glycolytic_process,_and_NADPH_regeneration


id: CL:2547
description: Glycolysis, and Transketolase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2547_Glycolysis,_and_Transketolase_activity


id: CL:258
description: D-glucosamine PTS permease activity, and Short-chain dehydrogenase/reductase, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:258_D-glucosamine_PTS_permease_activity,_and_Short-chain_dehydrogenase/reductase,_conserved_site


id: CL:2590
description: Ribulose-phosphate 3-epimerase, and Lactose catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2590_Ribulose-phosphate_3-epimerase,_and_Lactose_catabolic_process


id: CL:2605
description: 6-phosphogluconate dehydrogenase, and Carbohydrate kinase, FGGY
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2605_6-phosphogluconate_dehydrogenase,_and_Carbohydrate_kinase,_FGGY


id: CL:2614
description: KDPG/KHG aldolase, and Glucuronate catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2614_KDPG/KHG_aldolase,_and_Glucuronate_catabolic_process


id: CL:2615
description: KDPG/KHG aldolase, and Mannonate dehydratase
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2615_KDPG/KHG_aldolase,_and_Mannonate_dehydratase


id: CL:2624
description: Glucuronate catabolic process, and KDPG/KHG aldolase
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2624_Glucuronate_catabolic_process,_and_KDPG/KHG_aldolase


id: CL:2650
description: Carbohydrate transmembrane transport, and Ascorbate and aldarate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2650_Carbohydrate_transmembrane_transport,_and_Ascorbate_and_aldarate_metabolism


id: CL:2651
description: Carbohydrate transmembrane transport
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2651_Carbohydrate_transmembrane_transport


id: CL:2652
description: Phosphotransferase system, EIIB component, type 2, and PTS system sugar-specific permease component
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2652_Phosphotransferase_system,_EIIB_component,_type_2,_and_PTS_system_sugar-specific_permease_component


id: CL:2653
description: PTS EIIA type-2 domain, and Polyol transmembrane transport
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2653_PTS_EIIA_type-2_domain,_and_Polyol_transmembrane_transport


id: CL:2655
description: PTS EIIA type-2 domain, and Galactitol permease IIC component
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2655_PTS_EIIA_type-2_domain,_and_Galactitol_permease_IIC_component


id: CL:2675
description: Mannitol transmembrane transport, and PTS EIIA type-2 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2675_Mannitol_transmembrane_transport,_and_PTS_EIIA_type-2_domain


id: CL:268
description: Mixed, incl. Envelope, and NAD dependent epimerase/dehydratase family
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:268_Mixed,_incl._Envelope,_and_NAD_dependent_epimerase/dehydratase_family


id: CL:2688
description: Thiamin diphosphate-binding fold, and Ascorbate and aldarate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2688_Thiamin_diphosphate-binding_fold,_and_Ascorbate_and_aldarate_metabolism


id: CL:2697
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2697_Mixed,_incl._PTS_system_sorbose_subfamily_IIB_component,_and_PTS_system_sorbose-specific_iic_component

description:
  Mixed, incl. PTS system sorbose subfamily IIB component, and PTS system sorbose-specific iic component


id: CL:2699
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2699_Mixed,_incl._PTS_system_sorbose-specific_iic_component,_and_PTS_system_mannose/fructose/sorbose_family_IID_component

description:
  Mixed, incl. PTS system sorbose-specific iic component, and PTS system mannose/fructose/sorbose family IID component


id: CL:2720
description: Ascorbate and aldarate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2720_Ascorbate_and_aldarate_metabolism


id: CL:2735
description: Glycosyl hydrolase family 1, and Phosphotransferase system, EIIC component, type 3
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2735_Glycosyl_hydrolase_family_1,_and_Phosphotransferase_system,_EIIC_component,_type_3


id: CL:2738
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2738_Mixed,_incl._Phosphotransferase_system,_EIIC_component,_type_3,_and_PTS_system,_Lactose/Cellobiose_specific_IIA_subunit

description:
  Mixed, incl. Phosphotransferase system, EIIC component, type 3, and PTS system, Lactose/Cellobiose specific IIA subunit


id: CL:2740
description: Phosphotransferase system, EIIC component, type 3, and Glucosidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2740_Phosphotransferase_system,_EIIC_component,_type_3,_and_Glucosidase_activity


id: CL:2776
description: Mixed, incl. DeoR-type HTH domain, and Lactose metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2776_Mixed,_incl._DeoR-type_HTH_domain,_and_Lactose_metabolic_process


id: CL:2779
description: Fructose 1-phosphate kinase, and Ribose/Galactose Isomerase
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2779_Fructose_1-phosphate_kinase,_and_Ribose/Galactose_Isomerase


id: CL:280
description: Alcohol dehydrogenase-like, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:280_Alcohol_dehydrogenase-like,_C-terminal


id: CL:2803
description: Mixed, incl. Periplasmic binding protein-like I, and ABC-type carbohydrate transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2803_Mixed,_incl._Periplasmic_binding_protein-like_I,_and_ABC-type_carbohydrate_transporter_activity


id: CL:2805
description: Transcriptional regulator LacI/GalR-like, sensor domain, and D-ribose metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2805_Transcriptional_regulator_LacI/GalR-like,_sensor_domain,_and_D-ribose_metabolic_process


id: CL:2809
description: D-ribose metabolic process, and Monosaccharide transmembrane transport
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2809_D-ribose_metabolic_process,_and_Monosaccharide_transmembrane_transport


id: CL:2833
description: ABC-type maltose transporter activity, and Bacterial extracellular solute-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2833_ABC-type_maltose_transporter_activity,_and_Bacterial_extracellular_solute-binding_protein


id: CL:2859
description: Starch and sucrose metabolism, and Galactose metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2859_Starch_and_sucrose_metabolism,_and_Galactose_metabolic_process


id: CL:2860
description: Mixed, incl. Glycosyl hydrolase, family 13, catalytic domain, and Galactose metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2860_Mixed,_incl._Glycosyl_hydrolase,_family_13,_catalytic_domain,_and_Galactose_metabolism


id: CL:2861
description: Glycosyl hydrolase, family 13, catalytic domain, and Glycosidase
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2861_Glycosyl_hydrolase,_family_13,_catalytic_domain,_and_Glycosidase


id: CL:2862
description: Glycosyl hydrolase, family 13, catalytic domain, and Hexosyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2862_Glycosyl_hydrolase,_family_13,_catalytic_domain,_and_Hexosyltransferase_activity


id: CL:2864
description: Glycosyl hydrolase, family 13, catalytic domain, and Glucan metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2864_Glycosyl_hydrolase,_family_13,_catalytic_domain,_and_Glucan_metabolic_process


id: CL:2866
description: Glucan metabolic process, and Immunoglobulin-like fold
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2866_Glucan_metabolic_process,_and_Immunoglobulin-like_fold


id: CL:2891
description: Galactose mutarotase-like domain superfamily, and Beta-phosphoglucomutase
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2891_Galactose_mutarotase-like_domain_superfamily,_and_Beta-phosphoglucomutase


id: CL:2902
description: Alpha-galactosidase activity, and Oligo-1,6-glucosidase, domain 2
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2902_Alpha-galactosidase_activity,_and_Oligo-1,6-glucosidase,_domain_2


id: CL:2918
description: Uridylyltransferase activity, and UDP-glucose 4-epimerase
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2918_Uridylyltransferase_activity,_and_UDP-glucose_4-epimerase


id: CL:2933
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2933_Mixed,_incl._Transmembrane_protein_TMEM64,_and_Glycosyltransferase_subfamily_4-like,_N-terminal_domain

description:
  Mixed, incl. Transmembrane protein TMEM64, and Glycosyltransferase subfamily 4-like, N-terminal domain


id: CL:2937
description: Glycosyltransferase subfamily 4-like, N-terminal domain, and Diacylglycerol/lipid kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2937_Glycosyltransferase_subfamily_4-like,_N-terminal_domain,_and_Diacylglycerol/lipid_kinase


id: CL:294
description: Mixed, incl. ANL, N-terminal domain, and Purine-cytosine permease
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:294_Mixed,_incl._ANL,_N-terminal_domain,_and_Purine-cytosine_permease


id: CL:2956
description: Mixed, incl. Glycoside hydrolase family 1, active site, and YtxH-like protein
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2956_Mixed,_incl._Glycoside_hydrolase_family_1,_active_site,_and_YtxH-like_protein


id: CL:2967
description: Mixed, incl. Polyol catabolic process, and Aldo/keto reductase family
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2967_Mixed,_incl._Polyol_catabolic_process,_and_Aldo/keto_reductase_family


id: CL:2968
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2968_Mixed,_incl._Aldo/keto_reductase_family,_and_Alcohol_dehydrogenase,_iron-type/glycerol_dehydrogenase_GldA

description:
  Mixed, incl. Aldo/keto reductase family, and Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA


id: CL:2969
description: Mixed, incl. Aldo/keto reductase family, and Alpha/beta hydrolase fold
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2969_Mixed,_incl._Aldo/keto_reductase_family,_and_Alpha/beta_hydrolase_fold


id: CL:2971
description: Aldo/keto reductase family, and Alpha/beta hydrolase fold
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2971_Aldo/keto_reductase_family,_and_Alpha/beta_hydrolase_fold


id: CL:2972
description: Aldo/keto reductase family, and Alpha/beta hydrolase fold
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2972_Aldo/keto_reductase_family,_and_Alpha/beta_hydrolase_fold


id: CL:2985
description: Aldo/keto reductase, conserved site, and Alcohol dehydrogenase (NAD+) activity
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:2985_Aldo/keto_reductase,_conserved_site,_and_Alcohol_dehydrogenase_(NAD+)_activity


id: CL:3006
description: Mixed, incl. Major intrinsic protein, and Alditol catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3006_Mixed,_incl._Major_intrinsic_protein,_and_Alditol_catabolic_process


id: CL:3007
description: Mixed, incl. Major intrinsic protein, and Carbohydrate kinase, FGGY
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3007_Mixed,_incl._Major_intrinsic_protein,_and_Carbohydrate_kinase,_FGGY


id: CL:3018
description: Glycerol dehydrogenase, and Alditol catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3018_Glycerol_dehydrogenase,_and_Alditol_catabolic_process


id: CL:3028
description: Mixed, incl. Inositol metabolic process, and Xylose isomerase-like, TIM barrel domain
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3028_Mixed,_incl._Inositol_metabolic_process,_and_Xylose_isomerase-like,_TIM_barrel_domain


id: CL:3029
description: Inositol metabolic process, and Xylose isomerase-like, TIM barrel domain
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3029_Inositol_metabolic_process,_and_Xylose_isomerase-like,_TIM_barrel_domain


id: CL:3030
description: Inositol metabolic process, and Xylose isomerase-like, TIM barrel domain
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3030_Inositol_metabolic_process,_and_Xylose_isomerase-like,_TIM_barrel_domain


id: CL:3033
description: Oxidoreductase family, C-terminal alpha/beta domain, and Xylose isomerase-like, TIM barrel domain
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3033_Oxidoreductase_family,_C-terminal_alpha/beta_domain,_and_Xylose_isomerase-like,_TIM_barrel_domain


id: CL:3057
description: Mixed, incl. L,D-transpeptidase catalytic domain, and Galactosidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3057_Mixed,_incl._L,D-transpeptidase_catalytic_domain,_and_Galactosidase_activity


id: CL:3066
description: Mixed, incl. Xylose isomerase-like, TIM barrel domain, and Membrane raft
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3066_Mixed,_incl._Xylose_isomerase-like,_TIM_barrel_domain,_and_Membrane_raft


id: CL:3079
description: Lactose permease-like, and HIT domain
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3079_Lactose_permease-like,_and_HIT_domain


id: CL:308
description: Lipid biosynthesis, and Fatty acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:308_Lipid_biosynthesis,_and_Fatty_acid_metabolic_process


id: CL:3082
description: Lactose permease-like, and Glycoside hydrolase, family 3, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3082_Lactose_permease-like,_and_Glycoside_hydrolase,_family_3,_N-terminal


id: CL:309
description: Lipid biosynthesis, and acetyl-CoA carboxylase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:309_Lipid_biosynthesis,_and_acetyl-CoA_carboxylase_complex


id: CL:3103
description: Mixed, incl. DNA-binding transcription factor activity, and GNAT domain
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3103_Mixed,_incl._DNA-binding_transcription_factor_activity,_and_GNAT_domain


id: CL:3104
description: Mixed, incl. GNAT domain, and DNA binding HTH domain, AraC-type
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3104_Mixed,_incl._GNAT_domain,_and_DNA_binding_HTH_domain,_AraC-type


id: CL:3106
description: Mixed, incl. DNA binding HTH domain, AraC-type, and GNAT domain
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3106_Mixed,_incl._DNA_binding_HTH_domain,_AraC-type,_and_GNAT_domain


id: CL:3107
description: Mixed, incl. DNA binding HTH domain, AraC-type, and UbiC transcription regulator-associated
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3107_Mixed,_incl._DNA_binding_HTH_domain,_AraC-type,_and_UbiC_transcription_regulator-associated


id: CL:3109
description: RmlC-like jelly roll fold, and Acetyltransferase (GNAT) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3109_RmlC-like_jelly_roll_fold,_and_Acetyltransferase_(GNAT)_domain


id: CL:311
description: Fatty acid biosynthesis, and Acyl carrier protein (ACP)
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:311_Fatty_acid_biosynthesis,_and_Acyl_carrier_protein_(ACP)


id: CL:3112
description: AraC-like ligand binding domain, and Acetyltransferase (GNAT) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3112_AraC-like_ligand_binding_domain,_and_Acetyltransferase_(GNAT)_domain


id: CL:313
description: Fatty acid metabolism, and Fatty acid synthase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:313_Fatty_acid_metabolism,_and_Fatty_acid_synthase_activity


id: CL:3138
description: Mixed, incl. tRNA threonylcarbamoyladenosine modification, and Protein acylation
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3138_Mixed,_incl._tRNA_threonylcarbamoyladenosine_modification,_and_Protein_acylation


id: CL:3141
description: tRNA threonylcarbamoyladenosine modification, and Protein acylation
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3141_tRNA_threonylcarbamoyladenosine_modification,_and_Protein_acylation


id: CL:315
description: Fatty acid synthase activity, and Acyl carrier protein (ACP)
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:315_Fatty_acid_synthase_activity,_and_Acyl_carrier_protein_(ACP)


id: CL:3173
description: Mixed, incl. LysR, substrate-binding, and AhpD-like
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3173_Mixed,_incl._LysR,_substrate-binding,_and_AhpD-like


id: CL:3174
description: Mixed, incl. AhpD-like, and Selenocompound metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3174_Mixed,_incl._AhpD-like,_and_Selenocompound_metabolism


id: CL:3175
description: Mixed, incl. AhpD-like, and Pectin lyase fold
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3175_Mixed,_incl._AhpD-like,_and_Pectin_lyase_fold


id: CL:3188
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3188_Mixed,_incl._Phosphoglycerate/bisphosphoglycerate_mutase,_active_site,_and_Lactone_catabolic_process

description:
  Mixed, incl. Phosphoglycerate/bisphosphoglycerate mutase, active site, and Lactone catabolic process


id: CL:3199
description: LysR, substrate-binding, and Furfural degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3199_LysR,_substrate-binding,_and_Furfural_degradation


id: CL:3225
description: Organic hydroxy compound biosynthetic process, and RsgA GTPase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3225_Organic_hydroxy_compound_biosynthetic_process,_and_RsgA_GTPase_domain


id: CL:3227
description: Thiamine metabolic process, and RsgA GTPase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3227_Thiamine_metabolic_process,_and_RsgA_GTPase_domain


id: CL:3253
description: Mixed, incl. Polysaccharide biosynthetic process, and Trimeric LpxA-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3253_Mixed,_incl._Polysaccharide_biosynthetic_process,_and_Trimeric_LpxA-like_superfamily


id: CL:3254
description: Polysaccharide biosynthetic process, and Glycosyl transferases group 1
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3254_Polysaccharide_biosynthetic_process,_and_Glycosyl_transferases_group_1


id: CL:3255
description: Polysaccharide biosynthetic process, and Trimeric LpxA-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3255_Polysaccharide_biosynthetic_process,_and_Trimeric_LpxA-like_superfamily


id: CL:3257
description: Polysaccharide biosynthetic process, and Sialic acid O-acyltransferase NeuD-like
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3257_Polysaccharide_biosynthetic_process,_and_Sialic_acid_O-acyltransferase_NeuD-like


id: CL:3258
description: Polysaccharide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3258_Polysaccharide_biosynthetic_process


id: CL:3259
description: Polysaccharide biosynthetic process, and Sialic acid O-acyltransferase NeuD-like
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3259_Polysaccharide_biosynthetic_process,_and_Sialic_acid_O-acyltransferase_NeuD-like


id: CL:3273
description: Capsule organization, and Tyrosine kinase, G-rich domain
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3273_Capsule_organization,_and_Tyrosine_kinase,_G-rich_domain


id: CL:3285
description: Lipopolysaccharide biosynthesis, and Polysaccharide biosynthesis protein
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3285_Lipopolysaccharide_biosynthesis,_and_Polysaccharide_biosynthesis_protein


id: CL:3302
description: Mixed, incl. Glycosyltransferase Family 4, and Polysaccharide biosynthesis protein
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3302_Mixed,_incl._Glycosyltransferase_Family_4,_and_Polysaccharide_biosynthesis_protein


id: CL:3316
description: Glycoprotein metabolic process, and Lipopolysaccharide biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3316_Glycoprotein_metabolic_process,_and_Lipopolysaccharide_biosynthesis


id: CL:3331
description: Mixed, incl. Carbonate dehydratase activity, and Proteoglycan metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3331_Mixed,_incl._Carbonate_dehydratase_activity,_and_Proteoglycan_metabolic_process


id: CL:3343
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3343_Mixed,_incl._Sulphur_relay,_DsrE/F-like,_and_Phosphoglycerate/bisphosphoglycerate_mutase,_active_site

description:
  Mixed, incl. Sulphur relay, DsrE/F-like, and Phosphoglycerate/bisphosphoglycerate mutase, active site


id: CL:3357
description: Mixed, incl. Poly-gamma-glutamate hydrolase, and Capsule organization
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3357_Mixed,_incl._Poly-gamma-glutamate_hydrolase,_and_Capsule_organization


id: CL:3359
description: Mixed, incl. NodB homology domain, and Aspartic-type peptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3359_Mixed,_incl._NodB_homology_domain,_and_Aspartic-type_peptidase_activity


id: CL:3372
description: Poly-gamma-glutamate hydrolase, and Capsule organization
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3372_Poly-gamma-glutamate_hydrolase,_and_Capsule_organization


id: CL:3382
description: Mixed, incl. Peptidase U32, and Protein alkylation
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3382_Mixed,_incl._Peptidase_U32,_and_Protein_alkylation


id: CL:3384
description: Mixed, incl. Protein alkylation, and PUA-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3384_Mixed,_incl._Protein_alkylation,_and_PUA-like_superfamily


id: CL:3396
description: Peptidase U32, and O-methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3396_Peptidase_U32,_and_O-methyltransferase_activity


id: CL:3405
description: Mixed, incl. Phosphorelay signal transduction system, and Flagellar assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3405_Mixed,_incl._Phosphorelay_signal_transduction_system,_and_Flagellar_assembly


id: CL:3406
description: Phosphorelay signal transduction system, and Flagellar assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3406_Phosphorelay_signal_transduction_system,_and_Flagellar_assembly


id: CL:3407
description: Flagellar assembly, and TadE-like protein
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3407_Flagellar_assembly,_and_TadE-like_protein


id: CL:3412
description: Cell motility, and Bacterial-type flagellum organization
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3412_Cell_motility,_and_Bacterial-type_flagellum_organization


id: CL:3415
description: Bacterial-type flagellum basal body, and Bacterial-type flagellum assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3415_Bacterial-type_flagellum_basal_body,_and_Bacterial-type_flagellum_assembly


id: CL:3416
description: Cytoskeletal motor activity, and Flagella basal body rod protein
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3416_Cytoskeletal_motor_activity,_and_Flagella_basal_body_rod_protein


id: CL:3419
description: Cytoskeletal motor activity, and Secreted
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3419_Cytoskeletal_motor_activity,_and_Secreted


id: CL:3440
description: Bacterial flagellum biogenesis, and Bacterial flagellum
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3440_Bacterial_flagellum_biogenesis,_and_Bacterial_flagellum


id: CL:347
description: Phospholipid metabolism, and 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:347_Phospholipid_metabolism,_and_3-Oxoacyl-[acyl-carrier-protein_(ACP)]_synthase_III


id: CL:3481
description: Mixed, incl. TadE-like protein, and Type II secretion system (T2SS), protein F
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3481_Mixed,_incl._TadE-like_protein,_and_Type_II_secretion_system_(T2SS),_protein_F


id: CL:3485
description: Type II secretion system (T2SS), protein F, and Type II/IV secretion system protein
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3485_Type_II_secretion_system_(T2SS),_protein_F,_and_Type_II/IV_secretion_system_protein


id: CL:3502
description: Phosphorelay signal transduction system, and P-type ion transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3502_Phosphorelay_signal_transduction_system,_and_P-type_ion_transporter_activity


id: CL:3504
description: Phosphorelay signal transduction system, and P-type ion transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3504_Phosphorelay_signal_transduction_system,_and_P-type_ion_transporter_activity


id: CL:3505
description: Phosphorelay signal transduction system
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3505_Phosphorelay_signal_transduction_system


id: CL:3506
description: Phosphorelay signal transduction system
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3506_Phosphorelay_signal_transduction_system


id: CL:3509
description: Two-component regulatory system, and PAS domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3509_Two-component_regulatory_system,_and_PAS_domain_superfamily


id: CL:3512
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3512_HAMP_(Histidine_kinases,_Adenylyl_cyclases,_Methyl_binding_proteins,_Phosphatases)_domain,_and_Signal_transduction_response_regulator,_C-terminal_effector

description:
  HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain, and Signal transduction response regulator, C-terminal effector


id: CL:3546
description: Mixed, incl. Symport, and PAS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3546_Mixed,_incl._Symport,_and_PAS_domain


id: CL:3556
description: Mixed, incl. PAS domain, and Regulation of single-species biofilm formation
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3556_Mixed,_incl._PAS_domain,_and_Regulation_of_single-species_biofilm_formation


id: CL:356
description: Mixed, incl. Phosphopantetheine, and NmrA-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:356_Mixed,_incl._Phosphopantetheine,_and_NmrA-like_domain


id: CL:3569
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3569_P-type_ion_transporter_activity,_and_Domain_present_in_phytochromes_and_cGMP-specific_phosphodiesterases.

description:
  P-type ion transporter activity, and Domain present in phytochromes and cGMP-specific phosphodiesterases.


id: CL:357
description: Phosphopantetheine, and ANL, N-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:357_Phosphopantetheine,_and_ANL,_N-terminal_domain


id: CL:3591
description: Mixed, incl. Phosphate ion transport, and Nitrogen regulatory PII-like, alpha/beta
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3591_Mixed,_incl._Phosphate_ion_transport,_and_Nitrogen_regulatory_PII-like,_alpha/beta


id: CL:3593
description: Phosphate ion transport, and Polyphosphate kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3593_Phosphate_ion_transport,_and_Polyphosphate_kinase_activity


id: CL:3615
description: Nitrogen regulatory PII-like, alpha/beta, and Mechanosensitive ion channel MscS
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3615_Nitrogen_regulatory_PII-like,_alpha/beta,_and_Mechanosensitive_ion_channel_MscS


id: CL:3617
description: Nitrogen regulatory PII-like, alpha/beta
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3617_Nitrogen_regulatory_PII-like,_alpha/beta


id: CL:3636
description: Mixed, incl. Peptidase M42, and VanZ-like
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3636_Mixed,_incl._Peptidase_M42,_and_VanZ-like


id: CL:3645
description: ABC transporters, and Nickel cation binding
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3645_ABC_transporters,_and_Nickel_cation_binding


id: CL:3648
description: ABC transporters, and Nickel cation binding
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3648_ABC_transporters,_and_Nickel_cation_binding


id: CL:3651
description: Amino acid transport, and Ligand-gated channel activity
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3651_Amino_acid_transport,_and_Ligand-gated_channel_activity


id: CL:3652
description: Amino acid transport, and Ligand-gated channel activity
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3652_Amino_acid_transport,_and_Ligand-gated_channel_activity


id: CL:3653
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3653_Amino_acid_ABC_transporter,_permease_protein,_3-TM_domain,_and_Bacterial_periplasmic_substrate-binding_proteins

description:
  Amino acid ABC transporter, permease protein, 3-TM domain, and Bacterial periplasmic substrate-binding proteins


id: CL:3654
description: Amino acid transport, and Ligand-gated channel activity
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3654_Amino_acid_transport,_and_Ligand-gated_channel_activity


id: CL:3655
description: Ligand-gated channel activity, and Amino acid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3655_Ligand-gated_channel_activity,_and_Amino_acid_transport


id: CL:3657
description: Ligand-gated channel activity, and ABC-type amino acid transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3657_Ligand-gated_channel_activity,_and_ABC-type_amino_acid_transporter_activity


id: CL:3659
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3659_Solute-binding_protein_family_3,_conserved_site,_and_Amino_acid_ABC_transporter,_permease_protein,_3-TM_domain

description:
  Solute-binding protein family 3, conserved site, and Amino acid ABC transporter, permease protein, 3-TM domain


id: CL:3661
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3661_Solute-binding_protein_family_3,_conserved_site,_and_Amino_acid_ABC_transporter,_permease_protein,_3-TM_domain

description:
  Solute-binding protein family 3, conserved site, and Amino acid ABC transporter, permease protein, 3-TM domain


id: CL:368
description: NmrA-like domain, and Peptidase M16, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:368_NmrA-like_domain,_and_Peptidase_M16,_C-terminal


id: CL:3695
description: Amino acid ABC transporter, permease protein, 3-TM domain, and Cell envelope
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3695_Amino_acid_ABC_transporter,_permease_protein,_3-TM_domain,_and_Cell_envelope


id: CL:3697
description: Amino acid ABC transporter, permease protein, 3-TM domain, and Cell envelope
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3697_Amino_acid_ABC_transporter,_permease_protein,_3-TM_domain,_and_Cell_envelope


id: CL:3720
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3720_Uroporphyrinogen_decarboxylase_(URO-D),_and_Amino_acid_ABC_transporter,_permease_protein,_3-TM_domain

description:
  Uroporphyrinogen decarboxylase (URO-D), and Amino acid ABC transporter, permease protein, 3-TM domain


id: CL:3729
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3729_Uroporphyrinogen_decarboxylase_(URO-D),_and_Amino_acid_ABC_transporter,_permease_protein,_3-TM_domain

description:
  Uroporphyrinogen decarboxylase (URO-D), and Amino acid ABC transporter, permease protein, 3-TM domain


id: CL:3742
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3742_ABC-type_amino_acid_transport_system,_ATPase_component,_HisP-type,_and_ABC_transporter_membrane_protein_permease_protein_ArtM/GltK/GlnP/TcyL/YhdX-like

description:
  ABC-type amino acid transport system, ATPase component, HisP-type, and ABC transporter membrane protein permease protein ArtM/GltK/GlnP/TcyL/YhdX-like


id: CL:3755
description: Mixed, incl. Branched-chain amino acid transport, and Acetoin metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3755_Mixed,_incl._Branched-chain_amino_acid_transport,_and_Acetoin_metabolic_process


id: CL:3758
description: Branched-chain amino acid transport, and ABC transporter, BtuC-like
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3758_Branched-chain_amino_acid_transport,_and_ABC_transporter,_BtuC-like


id: CL:3774
description: ABC transporter-like, conserved site, and Solute-binding protein family 5
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3774_ABC_transporter-like,_conserved_site,_and_Solute-binding_protein_family_5


id: CL:3775
description: Mixed, incl. ABC transporter-like, conserved site, and Solute-binding protein family 5
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3775_Mixed,_incl._ABC_transporter-like,_conserved_site,_and_Solute-binding_protein_family_5


id: CL:3776
description: Mixed, incl. ABC transporter-like, conserved site, and Solute-binding protein family 5
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3776_Mixed,_incl._ABC_transporter-like,_conserved_site,_and_Solute-binding_protein_family_5


id: CL:3777
description: Mixed, incl. MacB, ATP-binding domain, and Peptide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3777_Mixed,_incl._MacB,_ATP-binding_domain,_and_Peptide_transport


id: CL:3780
description: Peptide transport, and Nickel cation transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3780_Peptide_transport,_and_Nickel_cation_transmembrane_transporter_activity


id: CL:3782
description: Peptide transport, and Nickel cation transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3782_Peptide_transport,_and_Nickel_cation_transmembrane_transporter_activity


id: CL:3792
description: Peptide transport, and Nickel cation transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3792_Peptide_transport,_and_Nickel_cation_transmembrane_transporter_activity


id: CL:3805
description: MacB, ATP-binding domain, and Membrane component of ABC transporter, predicted
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3805_MacB,_ATP-binding_domain,_and_Membrane_component_of_ABC_transporter,_predicted


id: CL:3823
description: Mixed, incl. ABC-2 type transporter, and Domain of unknown function DUF4162
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3823_Mixed,_incl._ABC-2_type_transporter,_and_Domain_of_unknown_function_DUF4162


id: CL:3839
description: Polyamine transport, and ABC-type polyamine transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3839_Polyamine_transport,_and_ABC-type_polyamine_transporter_activity


id: CL:3870
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3870_ABC-type_glycine_betaine_transport_system,_substrate-binding_domain,_and_Binding-protein-dependent_transport_system_inner_membrane_component

description:
  ABC-type glycine betaine transport system, substrate-binding domain, and Binding-protein-dependent transport system inner membrane component


id: CL:3888
description: Mixed, incl. Nickel cation binding, and ECF transporter, substrate-specific component
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3888_Mixed,_incl._Nickel_cation_binding,_and_ECF_transporter,_substrate-specific_component


id: CL:3889
description: Mixed, incl. Nickel cation binding, and ECF transporter, substrate-specific component
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3889_Mixed,_incl._Nickel_cation_binding,_and_ECF_transporter,_substrate-specific_component


id: CL:3892
description: Mixed, incl. ABC transporter, CbiO/EcfA subunit, and ECF transporter, substrate-specific component
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3892_Mixed,_incl._ABC_transporter,_CbiO/EcfA_subunit,_and_ECF_transporter,_substrate-specific_component


id: CL:3895
description: BioY protein, and ABC transporter, CbiO/EcfA subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3895_BioY_protein,_and_ABC_transporter,_CbiO/EcfA_subunit


id: CL:3906
description: ABC transporter, CbiO/EcfA subunit, and Cobalt transport protein
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3906_ABC_transporter,_CbiO/EcfA_subunit,_and_Cobalt_transport_protein


id: CL:3922
description: Nickel cation binding, and Transition metal ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3922_Nickel_cation_binding,_and_Transition_metal_ion_transport


id: CL:3945
description: Mixed, incl. Cardiolipin synthase N-terminal, and Domain of unknown function DUF4162
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3945_Mixed,_incl._Cardiolipin_synthase_N-terminal,_and_Domain_of_unknown_function_DUF4162


id: CL:396
description: Mixed, incl. Sodium transport, and Biotin-binding site
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:396_Mixed,_incl._Sodium_transport,_and_Biotin-binding_site


id: CL:3966
description: Mixed, incl. Cation transport, and Ferrous iron transporter FeoA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3966_Mixed,_incl._Cation_transport,_and_Ferrous_iron_transporter_FeoA_domain


id: CL:3967
description: Mixed, incl. Cation transport, and Ferrous iron transporter FeoA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3967_Mixed,_incl._Cation_transport,_and_Ferrous_iron_transporter_FeoA_domain


id: CL:3969
description: Mixed, incl. Cation transport, and Ferrous iron transporter FeoA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3969_Mixed,_incl._Cation_transport,_and_Ferrous_iron_transporter_FeoA_domain


id: CL:3970
description: Mixed, incl. Cation transport, and Cupredoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3970_Mixed,_incl._Cation_transport,_and_Cupredoxin


id: CL:3972
description: Mixed, incl. P-type ATPase, subfamily IB, and Cupredoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3972_Mixed,_incl._P-type_ATPase,_subfamily_IB,_and_Cupredoxin


id: CL:3974
description: Mixed, incl. Heavy-metal-associated domain, and Cupredoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3974_Mixed,_incl._Heavy-metal-associated_domain,_and_Cupredoxin


id: CL:3977
description: Heavy-metal-associated domain, and P-type ATPase, subfamily IB
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:3977_Heavy-metal-associated_domain,_and_P-type_ATPase,_subfamily_IB


id: CL:398
description: Sodium transport, and Biotin-binding site
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:398_Sodium_transport,_and_Biotin-binding_site


id: CL:4014
description: Mixed, incl. Adhesin B, and NRAMP family
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4014_Mixed,_incl._Adhesin_B,_and_NRAMP_family


id: CL:4017
description: Adhesin B, and ABC transporter, BtuC-like
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4017_Adhesin_B,_and_ABC_transporter,_BtuC-like


id: CL:4040
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4040_Nucleoside_recognition,_and_This_entry_represents_the_core_domain_of_the_ferrous_iron_(Fe2+)_transport_protein_FeoA_found_in_bacteria._This_domain_also_occurs_at_the_C-terminus_in_related_proteins._The_transporter_Feo_is_composed_of_three_proteins:_FeoA_a_small,_soluble_...

description:
  Nucleoside recognition, and This entry represents the core domain of the ferrous iron (Fe2+) transport protein FeoA found in bacteria. This domain also occurs at the C-terminus in related proteins. The transporter Feo is composed of three proteins: FeoA a small, soluble ...


id: CL:4055
description: Mixed, incl. Isoprenylcysteine carboxyl methyltransferase, and Ornithine decarboxylase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4055_Mixed,_incl._Isoprenylcysteine_carboxyl_methyltransferase,_and_Ornithine_decarboxylase_activity


id: CL:4056
description: Mixed, incl. Ornithine decarboxylase activity, and Cyclic nucleotide-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4056_Mixed,_incl._Ornithine_decarboxylase_activity,_and_Cyclic_nucleotide-binding_domain


id: CL:4065
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4065_Isoprenylcysteine_carboxyl_methyltransferase,_and_Tetracycline_resistance_protein_TetA/multidrug_resistance_protein_MdtG

description:
  Isoprenylcysteine carboxyl methyltransferase, and Tetracycline resistance protein TetA/multidrug resistance protein MdtG


id: CL:4074
description: Mixed, incl. Dienelactone hydrolase, and Sulfite exporter TauE/SafE
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4074_Mixed,_incl._Dienelactone_hydrolase,_and_Sulfite_exporter_TauE/SafE


id: CL:4085
description: Mixed, incl. Transmembrane helix, and Response to stimulus
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4085_Mixed,_incl._Transmembrane_helix,_and_Response_to_stimulus


id: CL:4086
description: Mixed, incl. Transmembrane helix, and Response to stress
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4086_Mixed,_incl._Transmembrane_helix,_and_Response_to_stress


id: CL:4087
description: Mixed, incl. Transmembrane helix, and Response to stress
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4087_Mixed,_incl._Transmembrane_helix,_and_Response_to_stress


id: CL:4088
description: Mixed, incl. Transmembrane helix, and Cellular response to DNA damage stimulus
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4088_Mixed,_incl._Transmembrane_helix,_and_Cellular_response_to_DNA_damage_stimulus


id: CL:4089
description: Mixed, incl. Transmembrane helix, and Porphyrin and chlorophyll metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4089_Mixed,_incl._Transmembrane_helix,_and_Porphyrin_and_chlorophyll_metabolism


id: CL:4091
description: Mostly uncharacterized, incl. Porphyrin and chlorophyll metabolism, and Phosphotransbutyrylase
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4091_Mostly_uncharacterized,_incl._Porphyrin_and_chlorophyll_metabolism,_and_Phosphotransbutyrylase


id: CL:4093
description: Mostly uncharacterized, incl. Pigment metabolic process, and Radical SAM
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4093_Mostly_uncharacterized,_incl._Pigment_metabolic_process,_and_Radical_SAM


id: CL:4094
description: Mostly uncharacterized, incl. Prolycopene isomerase-like, and Six-bladed beta-propeller, TolB-like
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4094_Mostly_uncharacterized,_incl._Prolycopene_isomerase-like,_and_Six-bladed_beta-propeller,_TolB-like


id: CL:4096
description: Mixed, incl. Prolycopene isomerase-like, and Peptidase S26A, signal peptidase I, serine active site
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4096_Mixed,_incl._Prolycopene_isomerase-like,_and_Peptidase_S26A,_signal_peptidase_I,_serine_active_site


id: CL:4098
description: Prolycopene isomerase-like, and Response to toxic substance
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4098_Prolycopene_isomerase-like,_and_Response_to_toxic_substance


id: CL:4120
description: Mixed, incl. Six-bladed beta-propeller, TolB-like, and Phosphotransbutyrylase
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4120_Mixed,_incl._Six-bladed_beta-propeller,_TolB-like,_and_Phosphotransbutyrylase


id: CL:4122
description: Mixed, incl. Six-bladed beta-propeller, TolB-like, and Extrinsic component of membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4122_Mixed,_incl._Six-bladed_beta-propeller,_TolB-like,_and_Extrinsic_component_of_membrane


id: CL:4143
description: Mixed, incl. Putative TM nitroreductase, and Ketone biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4143_Mixed,_incl._Putative_TM_nitroreductase,_and_Ketone_biosynthetic_process


id: CL:4170
description: Mixed, incl. Phosphotransbutyrylase, and ATPase, BadF/BadG/BcrA/BcrD type
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4170_Mixed,_incl._Phosphotransbutyrylase,_and_ATPase,_BadF/BadG/BcrA/BcrD_type


id: CL:419
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:419_Mixed,_incl._Glyoxylate_metabolic_process,_and_D-isomer_specific_2-hydroxyacid_dehydrogenase,_NAD-binding_domain_conserved_site

description:
  Mixed, incl. Glyoxylate metabolic process, and D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site


id: CL:4193
description: Mostly uncharacterized, incl. ATPase, AAA-type, core, and Sigma factor
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4193_Mostly_uncharacterized,_incl._ATPase,_AAA-type,_core,_and_Sigma_factor


id: CL:4195
description: Mostly uncharacterized, incl. Sigma factor, and Positive regulation of cellular process
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4195_Mostly_uncharacterized,_incl._Sigma_factor,_and_Positive_regulation_of_cellular_process


id: CL:4196
description: Mixed, incl. Positive regulation of cellular process, and Outer membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4196_Mixed,_incl._Positive_regulation_of_cellular_process,_and_Outer_membrane


id: CL:4198
description: Mixed, incl. Outer membrane, and Domain of unknown function DUF1232
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4198_Mixed,_incl._Outer_membrane,_and_Domain_of_unknown_function_DUF1232


id: CL:4214
description: Mixed, incl. Alpha/beta hydrolase fold, and Uncharacterized protein YczE/YyaS-like
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4214_Mixed,_incl._Alpha/beta_hydrolase_fold,_and_Uncharacterized_protein_YczE/YyaS-like


id: CL:4225
description: Mixed, incl. Sigma factor, and Negative regulation of RNA metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4225_Mixed,_incl._Sigma_factor,_and_Negative_regulation_of_RNA_metabolic_process


id: CL:4243
description: Mixed, incl. ATPase, AAA-type, core, and DNA biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4243_Mixed,_incl._ATPase,_AAA-type,_core,_and_DNA_biosynthetic_process


id: CL:4244
description: Mixed, incl. Double-strand break repair, and TPR repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4244_Mixed,_incl._Double-strand_break_repair,_and_TPR_repeat


id: CL:4246
description: Mixed, incl. TPR repeat, and UmuC domain
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4246_Mixed,_incl._TPR_repeat,_and_UmuC_domain


id: CL:4271
description: Mixed, incl. MgsA AAA+ ATPase C terminal, and Major facilitator superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4271_Mixed,_incl._MgsA_AAA+_ATPase_C_terminal,_and_Major_facilitator_superfamily


id: CL:4280
description: Mixed, incl. Pentapeptide repeat, and beta-Lactam resistance
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4280_Mixed,_incl._Pentapeptide_repeat,_and_beta-Lactam_resistance


id: CL:4282
description: Mixed, incl. Pentapeptide repeat, and MarR family
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4282_Mixed,_incl._Pentapeptide_repeat,_and_MarR_family


id: CL:4284
description: Mixed, incl. GIY-YIG catalytic domain, and MerR transcriptional regulator
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4284_Mixed,_incl._GIY-YIG_catalytic_domain,_and_MerR_transcriptional_regulator


id: CL:4298
description: Mixed, incl. Calcium ion binding, and Beta-lactamase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4298_Mixed,_incl._Calcium_ion_binding,_and_Beta-lactamase_activity


id: CL:4318
description: Mixed, incl. GyrI-like small molecule binding domain, and OsmC/Ohr family
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4318_Mixed,_incl._GyrI-like_small_molecule_binding_domain,_and_OsmC/Ohr_family


id: CL:4327
description: Mixed, incl. Protein repair, and Armadillo-like helical
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4327_Mixed,_incl._Protein_repair,_and_Armadillo-like_helical


id: CL:4328
description: Mixed, incl. Armadillo-like helical, and Alpha/beta hydrolase fold
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4328_Mixed,_incl._Armadillo-like_helical,_and_Alpha/beta_hydrolase_fold


id: CL:4337
description: Mixed, incl. Protein repair, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4337_Mixed,_incl._Protein_repair,_and_Signal


id: CL:434
description: Mixed, incl. Nucleoside monophosphate metabolic process, and Amino-acid biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:434_Mixed,_incl._Nucleoside_monophosphate_metabolic_process,_and_Amino-acid_biosynthesis


id: CL:4348
description: Mixed, incl. Cell death, and Stringent response
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4348_Mixed,_incl._Cell_death,_and_Stringent_response


id: CL:435
description: Amino-acid biosynthesis, and Phenylalanine, tyrosine and tryptophan biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:435_Amino-acid_biosynthesis,_and_Phenylalanine,_tyrosine_and_tryptophan_biosynthesis


id: CL:436
description: Phenylalanine, tyrosine and tryptophan biosynthesis, and Histidine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:436_Phenylalanine,_tyrosine_and_tryptophan_biosynthesis,_and_Histidine_metabolic_process


id: CL:4366
description: Mixed, incl. Chloride transport, and Sulfatase, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4366_Mixed,_incl._Chloride_transport,_and_Sulfatase,_N-terminal


id: CL:438
description: Phenylalanine, tyrosine and tryptophan biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:438_Phenylalanine,_tyrosine_and_tryptophan_biosynthesis


id: CL:4384
description: Mixed, incl. Major facilitator superfamily, and NADPH-dependent FMN reductase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4384_Mixed,_incl._Major_facilitator_superfamily,_and_NADPH-dependent_FMN_reductase-like


id: CL:4385
description: Mixed, incl. NADPH-dependent FMN reductase-like, and ApbE family
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4385_Mixed,_incl._NADPH-dependent_FMN_reductase-like,_and_ApbE_family


id: CL:4386
description: Mixed, incl. Prenyltransferase activity, and ApbE family
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4386_Mixed,_incl._Prenyltransferase_activity,_and_ApbE_family


id: CL:4388
description: Mixed, incl. Prenyltransferase activity, and NAD metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4388_Mixed,_incl._Prenyltransferase_activity,_and_NAD_metabolic_process


id: CL:4391
description: Prenyltransferase activity, and NAD metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4391_Prenyltransferase_activity,_and_NAD_metabolic_process


id: CL:4416
description: Mixed, incl. Membrane transport protein, and FMN-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4416_Mixed,_incl._Membrane_transport_protein,_and_FMN-binding


id: CL:4418
description: Membrane transport protein, and FMN-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4418_Membrane_transport_protein,_and_FMN-binding


id: CL:4435
description: Mixed, incl. NADPH-dependent FMN reductase-like, and Bacterial chemotaxis
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4435_Mixed,_incl._NADPH-dependent_FMN_reductase-like,_and_Bacterial_chemotaxis


id: CL:4436
description: Mixed, incl. NADPH-dependent FMN reductase, and Nitronate monooxygenase
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4436_Mixed,_incl._NADPH-dependent_FMN_reductase,_and_Nitronate_monooxygenase


id: CL:4439
description: Mixed, incl. Acid phosphatase homologues, and Nucleus
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4439_Mixed,_incl._Acid_phosphatase_homologues,_and_Nucleus


id: CL:4462
description: Mixed, incl. PAS domain, and ApbE family
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4462_Mixed,_incl._PAS_domain,_and_ApbE_family


id: CL:4478
description: Mixed, incl. Major facilitator superfamily, and Amidohydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4478_Mixed,_incl._Major_facilitator_superfamily,_and_Amidohydrolase


id: CL:4479
description: Mixed, incl. Major facilitator superfamily, and Amidohydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4479_Mixed,_incl._Major_facilitator_superfamily,_and_Amidohydrolase


id: CL:4480
description: Mixed, incl. Major facilitator superfamily, and Lactose transport
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4480_Mixed,_incl._Major_facilitator_superfamily,_and_Lactose_transport


id: CL:4482
description: Major facilitator superfamily, and Nitronate monooxygenase
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4482_Major_facilitator_superfamily,_and_Nitronate_monooxygenase


id: CL:4521
description: Mixed, incl. Amidohydrolase, and Fusaric acid resistance protein-like
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4521_Mixed,_incl._Amidohydrolase,_and_Fusaric_acid_resistance_protein-like


id: CL:4522
description: Mixed, incl. AI-2E family transporter, and Biological process involved in symbiotic interaction
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4522_Mixed,_incl._AI-2E_family_transporter,_and_Biological_process_involved_in_symbiotic_interaction


id: CL:4531
description: Amidohydrolase, and Fusaric acid resistance protein-like
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4531_Amidohydrolase,_and_Fusaric_acid_resistance_protein-like


id: CL:4540
description: Mixed, incl. Chromate transport, and FeS cluster biogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4540_Mixed,_incl._Chromate_transport,_and_FeS_cluster_biogenesis


id: CL:4555
description: Mixed, incl. Glycerol metabolic process, and Bacterial PH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4555_Mixed,_incl._Glycerol_metabolic_process,_and_Bacterial_PH_domain


id: CL:4557
description: Mixed, incl. DegV, and Alkaline shock protein Asp23
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4557_Mixed,_incl._DegV,_and_Alkaline_shock_protein_Asp23


id: CL:4559
description: Mixed, incl. DegV, and Alkaline shock protein Asp23
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4559_Mixed,_incl._DegV,_and_Alkaline_shock_protein_Asp23


id: CL:4596
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4596_Mostly_uncharacterized,_incl._Ubiquinone_and_other_terpenoid-quinone_biosynthesis,_and_Gcn5-related_N-acetyltransferase

description:
  Mostly uncharacterized, incl. Ubiquinone and other terpenoid-quinone biosynthesis, and Gcn5-related N-acetyltransferase


id: CL:4597
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4597_Mostly_uncharacterized,_incl._Glyoxalase/Bleomycin_resistance_protein/Dihydroxybiphenyl_dioxygenase,_and_Gcn5-related_N-acetyltransferase

description:
  Mostly uncharacterized, incl. Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase, and Gcn5-related N-acetyltransferase


id: CL:4598
description: Mixed, incl. PhnB-like, and Gcn5-related N-acetyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4598_Mixed,_incl._PhnB-like,_and_Gcn5-related_N-acetyltransferase


id: CL:4599
description: Mixed, incl. Gcn5-related N-acetyltransferase, and Divergent 4Fe-4S mono-cluster
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4599_Mixed,_incl._Gcn5-related_N-acetyltransferase,_and_Divergent_4Fe-4S_mono-cluster


id: CL:4601
description: Gcn5-related N-acetyltransferase, and Divergent 4Fe-4S mono-cluster
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4601_Gcn5-related_N-acetyltransferase,_and_Divergent_4Fe-4S_mono-cluster


id: CL:461
description: Tryptophan biosynthesis, and ADC synthase
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:461_Tryptophan_biosynthesis,_and_ADC_synthase


id: CL:4615
description: Mixed, incl. Oligopeptidase F, and Heparin metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4615_Mixed,_incl._Oligopeptidase_F,_and_Heparin_metabolic_process


id: CL:4628
description: PhnB-like, and DNA N-glycosylase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4628_PhnB-like,_and_DNA_N-glycosylase_activity


id: CL:4644
description: Mixed, incl. Protein/nucleic acid deglycase DJ-1, and Photosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4644_Mixed,_incl._Protein/nucleic_acid_deglycase_DJ-1,_and_Photosynthesis


id: CL:4646
description: Mixed, incl. Photosynthesis, and Toxin metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4646_Mixed,_incl._Photosynthesis,_and_Toxin_metabolic_process


id: CL:4662
description: Mixed, incl. Bacterial PH domain, and Integrase, SAM-like, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4662_Mixed,_incl._Bacterial_PH_domain,_and_Integrase,_SAM-like,_N-terminal


id: CL:4679
description: Mixed, incl. CoA hydrolase activity, and Regulation of transport
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4679_Mixed,_incl._CoA_hydrolase_activity,_and_Regulation_of_transport


id: CL:4695
description: Mixed, incl. EamA domain, and Flavoprotein-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4695_Mixed,_incl._EamA_domain,_and_Flavoprotein-like_superfamily


id: CL:4697
description: Mixed, incl. EamA domain, and OsmC/Ohr family
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4697_Mixed,_incl._EamA_domain,_and_OsmC/Ohr_family


id: CL:4699
description: EamA domain, and Single-stranded DNA binding
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4699_EamA_domain,_and_Single-stranded_DNA_binding


id: CL:4719
description: Mixed, incl. Flavodoxin/nitric oxide synthase, and ATPase, BadF/BadG/BcrA/BcrD type
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4719_Mixed,_incl._Flavodoxin/nitric_oxide_synthase,_and_ATPase,_BadF/BadG/BcrA/BcrD_type


id: CL:4733
description: Mixed, incl. MamQ/LemA, and Heme
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4733_Mixed,_incl._MamQ/LemA,_and_Heme


id: CL:4749
description: Mixed, incl. Membrane-bounded organelle, and Cellular response to stimulus
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4749_Mixed,_incl._Membrane-bounded_organelle,_and_Cellular_response_to_stimulus


id: CL:4768
description: Mixed, incl. Carboxylic acid transport, and GntR, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4768_Mixed,_incl._Carboxylic_acid_transport,_and_GntR,_C-terminal


id: CL:4769
description: Mixed, incl. GntR, C-terminal, and Citrate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4769_Mixed,_incl._GntR,_C-terminal,_and_Citrate_transport


id: CL:4770
description: Mixed, incl. Prosthetic group metabolic process, and Oxo-acid-lyase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4770_Mixed,_incl._Prosthetic_group_metabolic_process,_and_Oxo-acid-lyase_activity


id: CL:4773
description: Mixed, incl. Oxo-acid-lyase activity, and Prosthetic group metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4773_Mixed,_incl._Oxo-acid-lyase_activity,_and_Prosthetic_group_metabolic_process


id: CL:4791
description: Mixed, incl. GntR, C-terminal, and Citrate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4791_Mixed,_incl._GntR,_C-terminal,_and_Citrate_transport


id: CL:4801
description: Mixed, incl. RidA, conserved site, and Dicarboxylic acid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4801_Mixed,_incl._RidA,_conserved_site,_and_Dicarboxylic_acid_transport


id: CL:4813
description: Mixed, incl. Peptidase M3A/M3B, and Peptidase M42
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4813_Mixed,_incl._Peptidase_M3A/M3B,_and_Peptidase_M42


id: CL:4814
description: Mixed, incl. Peptidase M42, and CBS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4814_Mixed,_incl._Peptidase_M42,_and_CBS_domain


id: CL:4825
description: Peptidase M3A/M3B, and Sodium:dicarboxylate symporter
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4825_Peptidase_M3A/M3B,_and_Sodium:dicarboxylate_symporter


id: CL:4835
description: Mixed, incl. FAD-binding 8, and Cytochrome b5-like heme/steroid binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4835_Mixed,_incl._FAD-binding_8,_and_Cytochrome_b5-like_heme/steroid_binding_domain


id: CL:4836
description: Mixed, incl. FAD-binding 8, and Cytochrome b5-like heme/steroid binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4836_Mixed,_incl._FAD-binding_8,_and_Cytochrome_b5-like_heme/steroid_binding_domain


id: CL:4838
description: Mixed, incl. FAD-binding 8, and Cytochrome b5-like heme/steroid binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4838_Mixed,_incl._FAD-binding_8,_and_Cytochrome_b5-like_heme/steroid_binding_domain


id: CL:4852
description: Mixed, incl. FAD-binding 8, and Peptidase C39-like
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4852_Mixed,_incl._FAD-binding_8,_and_Peptidase_C39-like


id: CL:4871
description: Mixed, incl. DNA/RNA non-specific endonuclease, and Pfam phage integrase family
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4871_Mixed,_incl._DNA/RNA_non-specific_endonuclease,_and_Pfam_phage_integrase_family


id: CL:4882
description: Mostly uncharacterized, incl. Toxin-antitoxin complex, and DNA restriction-modification system
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4882_Mostly_uncharacterized,_incl._Toxin-antitoxin_complex,_and_DNA_restriction-modification_system


id: CL:4883
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4883_Mixed,_incl._DNA_restriction-modification_system,_and_Toll/interleukin-1_receptor_homology_(TIR)_domain_superfamily

description:
  Mixed, incl. DNA restriction-modification system, and Toll/interleukin-1 receptor homology (TIR) domain superfamily


id: CL:4884
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4884_Mixed,_incl._DNA_restriction-modification_system,_and_Type_I_restriction_modification_DNA_specificity_domain

description:
  Mixed, incl. DNA restriction-modification system, and Type I restriction modification DNA specificity domain


id: CL:4888
description: DNA restriction-modification system, and Type I restriction modification DNA specificity domain
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4888_DNA_restriction-modification_system,_and_Type_I_restriction_modification_DNA_specificity_domain


id: CL:4905
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4905_Mixed,_incl._Toll/interleukin-1_receptor_homology_(TIR)_domain_superfamily,_and_Bacterial-type_flagellum_organization

description:
  Mixed, incl. Toll/interleukin-1 receptor homology (TIR) domain superfamily, and Bacterial-type flagellum organization


id: CL:4916
description: Mixed, incl. Toxin-antitoxin complex, and Peptidase C26
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4916_Mixed,_incl._Toxin-antitoxin_complex,_and_Peptidase_C26


id: CL:4919
description: Mixed, incl. MazG nucleotide pyrophosphohydrolase domain, and GIY-YIG endonuclease
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4919_Mixed,_incl._MazG_nucleotide_pyrophosphohydrolase_domain,_and_GIY-YIG_endonuclease


id: CL:4934
description: Mixed, incl. Tetracyclin repressor-like, C-terminal domain superfamily, and Regulation of growth
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4934_Mixed,_incl._Tetracyclin_repressor-like,_C-terminal_domain_superfamily,_and_Regulation_of_growth


id: CL:4947
description: ABC transporter substrate binding protein, and Peptidase family S66
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4947_ABC_transporter_substrate_binding_protein,_and_Peptidase_family_S66


id: CL:4962
description: Mixed, incl. Transposition, DNA-mediated, and DNA integration
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4962_Mixed,_incl._Transposition,_DNA-mediated,_and_DNA_integration


id: CL:4963
description: Mixed, incl. DNA integration, and DDE transposase sub-family
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4963_Mixed,_incl._DNA_integration,_and_DDE_transposase_sub-family


id: CL:4964
description: Mixed, incl. DNA integration, and DDE transposase sub-family
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4964_Mixed,_incl._DNA_integration,_and_DDE_transposase_sub-family


id: CL:4966
description: DDE transposase sub-family, and IstB-like ATP-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4966_DDE_transposase_sub-family,_and_IstB-like_ATP-binding_protein


id: CL:4986
description: Mixed, incl. HTH-like domain, and Trp repressor/replication initiator
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:4986_Mixed,_incl._HTH-like_domain,_and_Trp_repressor/replication_initiator


id: CL:5004
description: Mixed, incl. Resolvase, N terminal domain, and MPN domain
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:5004_Mixed,_incl._Resolvase,_N_terminal_domain,_and_MPN_domain


id: CL:5006
description: Mixed, incl. Resolvase, N terminal domain, and DNA primase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:5006_Mixed,_incl._Resolvase,_N_terminal_domain,_and_DNA_primase_activity


id: CL:5018
description: Mixed, incl. MPN domain, and Protein of unknown function DUF960
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:5018_Mixed,_incl._MPN_domain,_and_Protein_of_unknown_function_DUF960


id: CL:5034
description: DDE transposase sub-family, and Transposase domain (DUF772)
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:5034_DDE_transposase_sub-family,_and_Transposase_domain_(DUF772)


id: CL:5038
description: Transposase DDE domain, and Transposase InsH, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:5038_Transposase_DDE_domain,_and_Transposase_InsH,_N-terminal


id: CL:504
description: Arginine metabolic process, and Diaminopimelate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:504_Arginine_metabolic_process,_and_Diaminopimelate_metabolic_process


id: CL:5054
description: Mixed, incl. Transposase domain (DUF772), and DEAD/DEAH box helicase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:5054_Mixed,_incl._Transposase_domain_(DUF772),_and_DEAD/DEAH_box_helicase_domain


id: CL:506
description: Arginine metabolic process, and Lysine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:506_Arginine_metabolic_process,_and_Lysine_biosynthesis


id: CL:5067
description: Mixed, incl. tRNA-splicing ligase RtcB, and DNA methylation on adenine
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:5067_Mixed,_incl._tRNA-splicing_ligase_RtcB,_and_DNA_methylation_on_adenine


id: CL:5081
description: Mostly uncharacterized, incl. Chromosome, and Helix-turn-helix XRE-family like proteins
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:5081_Mostly_uncharacterized,_incl._Chromosome,_and_Helix-turn-helix_XRE-family_like_proteins


id: CL:5082
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:5082_Mostly_uncharacterized,_incl._protein-DNA_complex,_and_PD-(D/E)XK_endonuclease-like_domain_superfamily

description:
  Mostly uncharacterized, incl. protein-DNA complex, and PD-(D/E)XK endonuclease-like domain superfamily


id: CL:5083
description: Mostly uncharacterized, incl. Xylene degradation, and Modulation of process of another organism
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:5083_Mostly_uncharacterized,_incl._Xylene_degradation,_and_Modulation_of_process_of_another_organism


id: CL:5084
description: Mostly uncharacterized, incl. Xylene degradation, and Acyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:5084_Mostly_uncharacterized,_incl._Xylene_degradation,_and_Acyltransferase_activity


id: CL:5100
description: Mixed, incl. Xylene degradation, and Acyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:5100_Mixed,_incl._Xylene_degradation,_and_Acyltransferase_activity


id: CL:5112
description: Mixed, incl. Modulation of process of another organism, and Transposase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:5112_Mixed,_incl._Modulation_of_process_of_another_organism,_and_Transposase_activity


id: CL:5124
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:5124_Mostly_uncharacterized,_incl._PD-(D/E)XK_endonuclease-like_domain_superfamily,_and_DnaD-like_domain_superfamily

description:
  Mostly uncharacterized, incl. PD-(D/E)XK endonuclease-like domain superfamily, and DnaD-like domain superfamily


id: CL:5126
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:5126_Mostly_uncharacterized,_incl._PD-(D/E)XK_endonuclease-like_domain_superfamily,_and_DnaD-like_domain_superfamily

description:
  Mostly uncharacterized, incl. PD-(D/E)XK endonuclease-like domain superfamily, and DnaD-like domain superfamily


id: CL:5128
description: Mixed, incl. DnaD-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:5128_Mixed,_incl._DnaD-like_domain_superfamily


id: CL:5142
description: Mixed, incl. Helix-turn-helix XRE-family like proteins
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:5142_Mixed,_incl._Helix-turn-helix_XRE-family_like_proteins


id: CL:5161
description: Mostly uncharacterized, incl. Helix-turn-helix domain, and Nuclease-related domain
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:5161_Mostly_uncharacterized,_incl._Helix-turn-helix_domain,_and_Nuclease-related_domain


id: CL:5163
description: Mixed, incl. Helix-turn-helix domain, and Helix-turn-helix XRE-family like proteins
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:5163_Mixed,_incl._Helix-turn-helix_domain,_and_Helix-turn-helix_XRE-family_like_proteins


id: CL:5193
description: Transposase, putative, helix-turn-helix domain, and DDE transposase sub-family
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:5193_Transposase,_putative,_helix-turn-helix_domain,_and_DDE_transposase_sub-family


id: CL:5195
description: Transposase, putative, helix-turn-helix domain
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:5195_Transposase,_putative,_helix-turn-helix_domain


id: CL:5224
description: Helix-turn-helix domain, and Transposase IS605, OrfB, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:5224_Helix-turn-helix_domain,_and_Transposase_IS605,_OrfB,_C-terminal


id: CL:5244
description: Probable transposase, IS891/IS1136/IS1341, and One carbon pool by folate
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:5244_Probable_transposase,_IS891/IS1136/IS1341,_and_One_carbon_pool_by_folate


id: CL:5247
description: Transposase IS605, OrfB, C-terminal, and One carbon pool by folate
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:5247_Transposase_IS605,_OrfB,_C-terminal,_and_One_carbon_pool_by_folate


id: CL:5271
description: Mixed, incl. ATPase regulator activity, and Family of unknown function DUF5670
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:5271_Mixed,_incl._ATPase_regulator_activity,_and_Family_of_unknown_function_DUF5670


id: CL:5287
description: HxlR-like helix-turn-helix, and Protein of unknown function DUF960
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:5287_HxlR-like_helix-turn-helix,_and_Protein_of_unknown_function_DUF960


id: CL:532
description: Monobactam biosynthesis, and Lysine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:532_Monobactam_biosynthesis,_and_Lysine_biosynthesis


id: CL:554
description: Mixed, incl. Asparagine metabolic process, and Asp/Glu racemase
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:554_Mixed,_incl._Asparagine_metabolic_process,_and_Asp/Glu_racemase


id: CL:568
description: Nucleoside monophosphate metabolic process, and Pyrimidine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:568_Nucleoside_monophosphate_metabolic_process,_and_Pyrimidine_metabolism


id: CL:569
description: Ribonucleoside monophosphate metabolic process, and Permease family
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:569_Ribonucleoside_monophosphate_metabolic_process,_and_Permease_family


id: CL:570
description: Purine nucleoside monophosphate metabolic process, and Permease family
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:570_Purine_nucleoside_monophosphate_metabolic_process,_and_Permease_family


id: CL:599
description: Mixed, incl. Purine salvage, and IMP dehydrogenase/GMP reductase
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:599_Mixed,_incl._Purine_salvage,_and_IMP_dehydrogenase/GMP_reductase


id: CL:602
description: IMP dehydrogenase/GMP reductase, and De novo AMP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:602_IMP_dehydrogenase/GMP_reductase,_and_De_novo_AMP_biosynthetic_process


id: CL:646
description: Pyrimidine metabolism, and Metalloenzyme
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:646_Pyrimidine_metabolism,_and_Metalloenzyme


id: CL:648
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:648_Mixed,_incl._Pyrimidine_nucleoside_triphosphate_metabolic_process,_and_Pyrimidine_nucleoside_metabolic_process

description:
  Mixed, incl. Pyrimidine nucleoside triphosphate metabolic process, and Pyrimidine nucleoside metabolic process


id: CL:651
description: Pyrimidine nucleoside metabolic process, and Purine-nucleoside phosphorylase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:651_Pyrimidine_nucleoside_metabolic_process,_and_Purine-nucleoside_phosphorylase_activity


id: CL:664
description: 2-deoxyribonucleotide biosynthetic process, and DNA synthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:664_2-deoxyribonucleotide_biosynthetic_process,_and_DNA_synthesis


id: CL:677
description: Ribonucleoside-diphosphate reductase complex, and Disulfide oxidoreductase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:677_Ribonucleoside-diphosphate_reductase_complex,_and_Disulfide_oxidoreductase_activity


id: CL:689
description: Mixed, incl. Pantothenate biosynthesis, and Biotin biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:689_Mixed,_incl._Pantothenate_biosynthesis,_and_Biotin_biosynthesis


id: CL:69
description: Organic acid metabolic process, and Oxidoreductase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:69_Organic_acid_metabolic_process,_and_Oxidoreductase_activity


id: CL:692
description: Biotin biosynthesis, and Methyltransferase domain 25
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:692_Biotin_biosynthesis,_and_Methyltransferase_domain_25


id: CL:70
description: Mixed, incl. Organic acid metabolic process, and NAD(P)-binding domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:70_Mixed,_incl._Organic_acid_metabolic_process,_and_NAD(P)-binding_domain_superfamily


id: CL:707
description: Pantothenate biosynthesis, and Coenzyme A biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:707_Pantothenate_biosynthesis,_and_Coenzyme_A_biosynthetic_process


id: CL:71
description: Organic acid metabolic process, and NAD(P)-binding domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:71_Organic_acid_metabolic_process,_and_NAD(P)-binding_domain_superfamily


id: CL:718
description: Mixed, incl. Sulfur compound metabolic process, and Protein folding
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:718_Mixed,_incl._Sulfur_compound_metabolic_process,_and_Protein_folding


id: CL:719
description: Mixed, incl. Protein folding, and Thioredoxin-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:719_Mixed,_incl._Protein_folding,_and_Thioredoxin-like_superfamily


id: CL:72
description: Mixed, incl. Organic acid metabolic process, and Short-chain dehydrogenase/reductase SDR
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:72_Mixed,_incl._Organic_acid_metabolic_process,_and_Short-chain_dehydrogenase/reductase_SDR


id: CL:720
description: Mixed, incl. Protein folding, and Thioredoxin-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:720_Mixed,_incl._Protein_folding,_and_Thioredoxin-like_superfamily


id: CL:721
description: Mixed, incl. Protein folding, and Thioredoxin-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:721_Mixed,_incl._Protein_folding,_and_Thioredoxin-like_superfamily


id: CL:723
description: Protein folding, and ClpA/B, conserved site 2
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:723_Protein_folding,_and_ClpA/B,_conserved_site_2


id: CL:726
description: Protein folding, and Adaptive Immune System
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:726_Protein_folding,_and_Adaptive_Immune_System


id: CL:728
description: Protein folding chaperone, and Stress response
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:728_Protein_folding_chaperone,_and_Stress_response


id: CL:73
description: Pyruvate metabolism, and Alpha-amino acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:73_Pyruvate_metabolism,_and_Alpha-amino_acid_metabolic_process


id: CL:74
description: Pyruvate metabolism, and Branched-chain amino acid biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:74_Pyruvate_metabolism,_and_Branched-chain_amino_acid_biosynthesis


id: CL:75
description: Citrate cycle (TCA cycle), and Pyruvate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:75_Citrate_cycle_(TCA_cycle),_and_Pyruvate_metabolism


id: CL:757
description: Thioredoxin domain, and Response to oxidative stress
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:757_Thioredoxin_domain,_and_Response_to_oxidative_stress


id: CL:76
description: Citrate cycle (TCA cycle), and Malic oxidoreductase
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:76_Citrate_cycle_(TCA_cycle),_and_Malic_oxidoreductase


id: CL:760
description: Pyridine nucleotide-disulphide oxidoreductase, class-II, active site, and Thioredoxin domain
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:760_Pyridine_nucleotide-disulphide_oxidoreductase,_class-II,_active_site,_and_Thioredoxin_domain


id: CL:77
description: Citrate cycle (TCA cycle), and Carbon utilization
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:77_Citrate_cycle_(TCA_cycle),_and_Carbon_utilization


id: CL:775
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:775_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_disulfide_as_acceptor,_and_Arachidonic_acid_metabolism

description:
  Oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor, and Arachidonic acid metabolism


id: CL:784
description: Mixed, incl. Rhodanese Homology Domain, and Iron-sulfur cluster assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:784_Mixed,_incl._Rhodanese_Homology_Domain,_and_Iron-sulfur_cluster_assembly


id: CL:785
description: Mixed, incl. Rhodanese Homology Domain, and Iron-sulfur cluster assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:785_Mixed,_incl._Rhodanese_Homology_Domain,_and_Iron-sulfur_cluster_assembly


id: CL:786
description: Mixed, incl. Rhodanese Homology Domain, and Cysteine desulfurase
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:786_Mixed,_incl._Rhodanese_Homology_Domain,_and_Cysteine_desulfurase


id: CL:787
description: Mixed, incl. Rhodanese Homology Domain, and Cysteine desulfurase
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:787_Mixed,_incl._Rhodanese_Homology_Domain,_and_Cysteine_desulfurase


id: CL:788
description: Mixed, incl. FAD/NAD-linked reductase, dimerisation domain superfamily, and FAD binding
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:788_Mixed,_incl._FAD/NAD-linked_reductase,_dimerisation_domain_superfamily,_and_FAD_binding


id: CL:79
description: Aerobic respiration, and Oxidoreductase activity, acting on the aldehyde or oxo group of donors
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:79_Aerobic_respiration,_and_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors


id: CL:799
description: Cysteine desulfurase, and THUMP domain
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:799_Cysteine_desulfurase,_and_THUMP_domain


id: CL:808
description: Rhodanese Homology Domain, and Transcription regulator AsnC-like
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:808_Rhodanese_Homology_Domain,_and_Transcription_regulator_AsnC-like


id: CL:81
description: succinate-CoA ligase complex, and Carbon utilization
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:81_succinate-CoA_ligase_complex,_and_Carbon_utilization


id: CL:819
description: Iron-sulfur cluster assembly, and Cysteine desulfurase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:819_Iron-sulfur_cluster_assembly,_and_Cysteine_desulfurase_activity


id: CL:831
description: tRNA wobble uridine modification, and Cysteine desulfurase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:831_tRNA_wobble_uridine_modification,_and_Cysteine_desulfurase_activity


id: CL:841
description: Response to arsenic-containing substance, and HTH ArsR-type DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:841_Response_to_arsenic-containing_substance,_and_HTH_ArsR-type_DNA-binding_domain


id: CL:855
description: Sulfur amino acid metabolic process, and NlpA lipoprotein
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:855_Sulfur_amino_acid_metabolic_process,_and_NlpA_lipoprotein


id: CL:857
description: Sulfur amino acid biosynthetic process, and S-adenosylmethionine synthetase
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:857_Sulfur_amino_acid_biosynthetic_process,_and_S-adenosylmethionine_synthetase


id: CL:860
description: S-methyltransferase activity, and FAD-linked oxidoreductase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:860_S-methyltransferase_activity,_and_FAD-linked_oxidoreductase-like


id: CL:876
description: Homoserine metabolic process, and Cysteine synthase
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:876_Homoserine_metabolic_process,_and_Cysteine_synthase


id: CL:898
description: NlpA lipoprotein, and Methionine transport
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:898_NlpA_lipoprotein,_and_Methionine_transport


id: CL:918
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:918_Mixed,_incl._Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_linear_amidines,_and_Purine-cytosine_permease

description:
  Mixed, incl. Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines, and Purine-cytosine permease


id: CL:947
description: Peptide metabolic process, and RNA metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:947_Peptide_metabolic_process,_and_RNA_metabolic_process


id: CL:948
description: Peptide metabolic process, and Protein localization
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:948_Peptide_metabolic_process,_and_Protein_localization


id: CL:955
description: Mixed, incl. Ribosome, and Protein export
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:955_Mixed,_incl._Ribosome,_and_Protein_export


id: CL:957
description: Ribosome, and Regulation of translation
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:957_Ribosome,_and_Regulation_of_translation


id: CL:958
description: Ribosome, and Regulation of translation
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:958_Ribosome,_and_Regulation_of_translation


id: CL:961
description: Ribosome, and Regulation of translation
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:961_Ribosome,_and_Regulation_of_translation


id: CL:966
description: Ribosome, and Regulation of translation
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:966_Ribosome,_and_Regulation_of_translation


id: CL:973
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:973_Structural_constituent_of_ribosome


id: CL:975
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:975_Structural_constituent_of_ribosome


id: CL:977
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:977_Structural_constituent_of_ribosome


id: CL:979
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:979_Structural_constituent_of_ribosome


id: CL:981
description: Small ribosomal subunit, and Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_140314_STRINGid_CL:981_Small_ribosomal_subunit,_and_Structural_constituent_of_ribosome


id: GO:0000701
description: Purine-specific mismatch base pair DNA N-glycosylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0000701
golevel: 6
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0000701_Purine-specific_mismatch_base_pair_DNA_N-glycosylase_activity


id: GO:0000716
description: Transcription-coupled nucleotide-excision repair, DNA damage recognition
memo: https://amigo.geneontology.org/amigo/term/GO:0000716
golevel: 7
name:
  GOBP.STRING_v12.0_140314_STRINGid_GO:0000716_Transcription-coupled_nucleotide-excision_repair,_DNA_damage_recognition


id: GO:0000724
description: Double-strand break repair via homologous recombination
memo: https://amigo.geneontology.org/amigo/term/GO:0000724
golevel: 7
name:
  GOBP.STRING_v12.0_140314_STRINGid_GO:0000724_Double-strand_break_repair_via_homologous_recombination


id: GO:0001073
description: Transcription antitermination factor activity, DNA binding
memo: https://amigo.geneontology.org/amigo/term/GO:0001073
golevel: 2
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0001073_Transcription_antitermination_factor_activity,_DNA_binding


id: GO:0003848
description: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003848
golevel: 5
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0003848_2-amino-4-hydroxy-6-hydroxymethyldihydropteridine_diphosphokinase_activity


id: GO:0003864
description: 3-methyl-2-oxobutanoate hydroxymethyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003864
golevel: 5
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0003864_3-methyl-2-oxobutanoate_hydroxymethyltransferase_activity


id: GO:0003871
description: 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003871
golevel: 6
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0003871_5-methyltetrahydropteroyltriglutamate-homocysteine_S-methyltransferase_activity


id: GO:0003906
description: DNA-(apurinic or apyrimidinic site) endonuclease activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003906
golevel: 6
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0003906_DNA-(apurinic_or_apyrimidinic_site)_endonuclease_activity


id: GO:0003908
description: methylated-DNA-[protein]-cysteine S-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003908
golevel: 4
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0003908_methylated-DNA-[protein]-cysteine_S-methyltransferase_activity


id: GO:0003917
description: DNA topoisomerase type I (single strand cut, ATP-independent) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003917
golevel: 5
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0003917_DNA_topoisomerase_type_I_(single_strand_cut,_ATP-independent)_activity


id: GO:0003918
description: DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003918
golevel: 3
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0003918_DNA_topoisomerase_type_II_(double_strand_cut,_ATP-hydrolyzing)_activity


id: GO:0003949
memo: https://amigo.geneontology.org/amigo/term/GO:0003949
golevel: 5
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0003949_1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide_isomerase_activity

description:
  1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity


id: GO:0003961
description: O-acetylhomoserine aminocarboxypropyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003961
golevel: 4
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0003961_O-acetylhomoserine_aminocarboxypropyltransferase_activity


id: GO:0003992
description: N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003992
golevel: 5
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0003992_N2-acetyl-L-ornithine:2-oxoglutarate_5-aminotransferase_activity


id: GO:0004015
description: adenosylmethionine-8-amino-7-oxononanoate transaminase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004015
golevel: 5
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0004015_adenosylmethionine-8-amino-7-oxononanoate_transaminase_activity


id: GO:0004018
description: N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004018
golevel: 5
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0004018_N6-(1,2-dicarboxyethyl)AMP_AMP-lyase_(fumarate-forming)_activity


id: GO:0004088
description: Carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004088
golevel: 5
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0004088_Carbamoyl-phosphate_synthase_(glutamine-hydrolyzing)_activity


id: GO:0004317
description: 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004317
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0004317_3-hydroxypalmitoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0004360
description: glutamine-fructose-6-phosphate transaminase (isomerizing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004360
golevel: 6
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0004360_glutamine-fructose-6-phosphate_transaminase_(isomerizing)_activity


id: GO:0004486
description: Methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004486
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0004486_Methylenetetrahydrofolate_dehydrogenase_[NAD(P)+]_activity


id: GO:0004488
description: Methylenetetrahydrofolate dehydrogenase (NADP+) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004488
golevel: 5
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0004488_Methylenetetrahydrofolate_dehydrogenase_(NADP+)_activity


id: GO:0004514
description: Nicotinate-nucleotide diphosphorylase (carboxylating) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004514
golevel: 5
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0004514_Nicotinate-nucleotide_diphosphorylase_(carboxylating)_activity


id: GO:0004616
description: Phosphogluconate dehydrogenase (decarboxylating) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004616
golevel: 5
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0004616_Phosphogluconate_dehydrogenase_(decarboxylating)_activity


id: GO:0004639
description: Phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004639
golevel: 5
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0004639_Phosphoribosylaminoimidazolesuccinocarboxamide_synthase_activity


id: GO:0004641
description: Phosphoribosylformylglycinamidine cyclo-ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004641
golevel: 5
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0004641_Phosphoribosylformylglycinamidine_cyclo-ligase_activity


id: GO:0004643
description: Phosphoribosylaminoimidazolecarboxamide formyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004643
golevel: 5
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0004643_Phosphoribosylaminoimidazolecarboxamide_formyltransferase_activity


id: GO:0004648
description: O-phospho-L-serine:2-oxoglutarate aminotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004648
golevel: 5
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0004648_O-phospho-L-serine:2-oxoglutarate_aminotransferase_activity


id: GO:0004748
description: Ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0004748
golevel: 6
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0004748_Ribonucleoside-diphosphate_reductase_activity,_thioredoxin_disulfide_as_acceptor


id: GO:0005350
description: Pyrimidine nucleobase transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0005350
golevel: 4
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0005350_Pyrimidine_nucleobase_transmembrane_transporter_activity


id: GO:0006490
description: Oligosaccharide-lipid intermediate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0006490
name:
  GOBP.STRING_v12.0_140314_STRINGid_GO:0006490_Oligosaccharide-lipid_intermediate_biosynthetic_process


id: GO:0006614
description: SRP-dependent cotranslational protein targeting to membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0006614
golevel: 6
name:
  GOBP.STRING_v12.0_140314_STRINGid_GO:0006614_SRP-dependent_cotranslational_protein_targeting_to_membrane


id: GO:0006620
description: Post-translational protein targeting to endoplasmic reticulum membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0006620
golevel: 6
name:
  GOBP.STRING_v12.0_140314_STRINGid_GO:0006620_Post-translational_protein_targeting_to_endoplasmic_reticulum_membrane


id: GO:0007157
description: Heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules
memo: https://amigo.geneontology.org/amigo/term/GO:0007157
golevel: 4
name:
  GOBP.STRING_v12.0_140314_STRINGid_GO:0007157_Heterophilic_cell-cell_adhesion_via_plasma_membrane_cell_adhesion_molecules


id: GO:0008108
description: UDP-glucose:hexose-1-phosphate uridylyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008108
golevel: 6
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0008108_UDP-glucose:hexose-1-phosphate_uridylyltransferase_activity


id: GO:0008263
description: Pyrimidine-specific mismatch base pair DNA N-glycosylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008263
golevel: 6
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0008263_Pyrimidine-specific_mismatch_base_pair_DNA_N-glycosylase_activity


id: GO:0008444
description: CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008444
golevel: 6
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0008444_CDP-diacylglycerol-glycerol-3-phosphate_3-phosphatidyltransferase_activity


id: GO:0008534
description: Oxidized purine nucleobase lesion DNA N-glycosylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008534
golevel: 6
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0008534_Oxidized_purine_nucleobase_lesion_DNA_N-glycosylase_activity


id: GO:0008657
description: DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) inhibitor activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008657
golevel: 4
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0008657_DNA_topoisomerase_type_II_(double_strand_cut,_ATP-hydrolyzing)_inhibitor_activity


id: GO:0008659
description: (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008659
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0008659_(3R)-hydroxymyristoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0008693
description: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008693
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0008693_3-hydroxydecanoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0008703
description: 5-amino-6-(5-phosphoribosylamino)uracil reductase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008703
golevel: 5
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0008703_5-amino-6-(5-phosphoribosylamino)uracil_reductase_activity


id: GO:0008757
description: S-adenosylmethionine-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008757
golevel: 5
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0008757_S-adenosylmethionine-dependent_methyltransferase_activity


id: GO:0008760
description: UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008760
golevel: 4
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0008760_UDP-N-acetylglucosamine_1-carboxyvinyltransferase_activity


id: GO:0008764
description: UDP-N-acetylmuramoylalanine-D-glutamate ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008764
golevel: 5
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0008764_UDP-N-acetylmuramoylalanine-D-glutamate_ligase_activity


id: GO:0008766
description: UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008766
golevel: 5
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0008766_UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine_ligase_activity


id: GO:0008817
description: cob(I)yrinic acid a,c-diamide adenosyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008817
golevel: 4
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0008817_cob(I)yrinic_acid_a,c-diamide_adenosyltransferase_activity


id: GO:0008835
description: Diaminohydroxyphosphoribosylaminopyrimidine deaminase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008835
golevel: 5
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0008835_Diaminohydroxyphosphoribosylaminopyrimidine_deaminase_activity


id: GO:0008961
description: Phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008961
golevel: 3
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0008961_Phosphatidylglycerol-prolipoprotein_diacylglyceryl_transferase_activity


id: GO:0008963
description: phospho-N-acetylmuramoyl-pentapeptide-transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008963
golevel: 5
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0008963_phospho-N-acetylmuramoyl-pentapeptide-transferase_activity


id: GO:0008965
description: Phosphoenolpyruvate-protein phosphotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008965
golevel: 5
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0008965_Phosphoenolpyruvate-protein_phosphotransferase_activity


id: GO:0008982
description: protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008982
golevel: 4
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0008982_protein-N(PI)-phosphohistidine-sugar_phosphotransferase_activity


id: GO:0009007
description: Site-specific DNA-methyltransferase (adenine-specific) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0009007
golevel: 5
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0009007_Site-specific_DNA-methyltransferase_(adenine-specific)_activity


id: GO:0009095
description: Aromatic amino acid family biosynthetic process, prephenate pathway
memo: https://amigo.geneontology.org/amigo/term/GO:0009095
golevel: 7
name:
  GOBP.STRING_v12.0_140314_STRINGid_GO:0009095_Aromatic_amino_acid_family_biosynthetic_process,_prephenate_pathway


id: GO:0009130
description: Pyrimidine nucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009130
golevel: 7
name:
  GOBP.STRING_v12.0_140314_STRINGid_GO:0009130_Pyrimidine_nucleoside_monophosphate_biosynthetic_process


id: GO:0009148
description: Pyrimidine nucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009148
golevel: 7
name:
  GOBP.STRING_v12.0_140314_STRINGid_GO:0009148_Pyrimidine_nucleoside_triphosphate_biosynthetic_process


id: GO:0009168
description: Purine ribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009168
golevel: 8
name:
  GOBP.STRING_v12.0_140314_STRINGid_GO:0009168_Purine_ribonucleoside_monophosphate_biosynthetic_process


id: GO:0009173
description: Pyrimidine ribonucleoside monophosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009173
golevel: 8
name:
  GOBP.STRING_v12.0_140314_STRINGid_GO:0009173_Pyrimidine_ribonucleoside_monophosphate_metabolic_process


id: GO:0009174
description: Pyrimidine ribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009174
golevel: 8
name:
  GOBP.STRING_v12.0_140314_STRINGid_GO:0009174_Pyrimidine_ribonucleoside_monophosphate_biosynthetic_process


id: GO:0009176
description: Pyrimidine deoxyribonucleoside monophosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009176
golevel: 8
name:
  GOBP.STRING_v12.0_140314_STRINGid_GO:0009176_Pyrimidine_deoxyribonucleoside_monophosphate_metabolic_process


id: GO:0009177
description: Pyrimidine deoxyribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009177
golevel: 8
name:
  GOBP.STRING_v12.0_140314_STRINGid_GO:0009177_Pyrimidine_deoxyribonucleoside_monophosphate_biosynthetic_process


id: GO:0009196
description: Pyrimidine deoxyribonucleoside diphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009196
golevel: 8
name:
  GOBP.STRING_v12.0_140314_STRINGid_GO:0009196_Pyrimidine_deoxyribonucleoside_diphosphate_metabolic_process


id: GO:0009197
description: Pyrimidine deoxyribonucleoside diphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009197
golevel: 8
name:
  GOBP.STRING_v12.0_140314_STRINGid_GO:0009197_Pyrimidine_deoxyribonucleoside_diphosphate_biosynthetic_process


id: GO:0009206
description: Purine ribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009206
golevel: 8
name:
  GOBP.STRING_v12.0_140314_STRINGid_GO:0009206_Purine_ribonucleoside_triphosphate_biosynthetic_process


id: GO:0009208
description: Pyrimidine ribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009208
golevel: 8
name:
  GOBP.STRING_v12.0_140314_STRINGid_GO:0009208_Pyrimidine_ribonucleoside_triphosphate_metabolic_process


id: GO:0009209
description: Pyrimidine ribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009209
golevel: 8
name:
  GOBP.STRING_v12.0_140314_STRINGid_GO:0009209_Pyrimidine_ribonucleoside_triphosphate_biosynthetic_process


id: GO:0009210
description: Pyrimidine ribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009210
golevel: 8
name:
  GOBP.STRING_v12.0_140314_STRINGid_GO:0009210_Pyrimidine_ribonucleoside_triphosphate_catabolic_process


id: GO:0009211
description: Pyrimidine deoxyribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009211
golevel: 8
name:
  GOBP.STRING_v12.0_140314_STRINGid_GO:0009211_Pyrimidine_deoxyribonucleoside_triphosphate_metabolic_process


id: GO:0009212
description: Pyrimidine deoxyribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009212
golevel: 8
name:
  GOBP.STRING_v12.0_140314_STRINGid_GO:0009212_Pyrimidine_deoxyribonucleoside_triphosphate_biosynthetic_process


id: GO:0009213
description: Pyrimidine deoxyribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009213
golevel: 8
name:
  GOBP.STRING_v12.0_140314_STRINGid_GO:0009213_Pyrimidine_deoxyribonucleoside_triphosphate_catabolic_process


id: GO:0009215
description: Purine deoxyribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009215
golevel: 8
name:
  GOBP.STRING_v12.0_140314_STRINGid_GO:0009215_Purine_deoxyribonucleoside_triphosphate_metabolic_process


id: GO:0009217
description: Purine deoxyribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009217
golevel: 8
name:
  GOBP.STRING_v12.0_140314_STRINGid_GO:0009217_Purine_deoxyribonucleoside_triphosphate_catabolic_process


id: GO:0009401
description: Phosphoenolpyruvate-dependent sugar phosphotransferase system
memo: https://amigo.geneontology.org/amigo/term/GO:0009401
golevel: 5
name:
  GOBP.STRING_v12.0_140314_STRINGid_GO:0009401_Phosphoenolpyruvate-dependent_sugar_phosphotransferase_system


id: GO:0009678
description: Pyrophosphate hydrolysis-driven proton transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0009678
golevel: 5
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0009678_Pyrophosphate_hydrolysis-driven_proton_transmembrane_transporter_activity


id: GO:0010142
description: Farnesyl diphosphate biosynthetic process, mevalonate pathway
memo: https://amigo.geneontology.org/amigo/term/GO:0010142
golevel: 7
name:
  GOBP.STRING_v12.0_140314_STRINGid_GO:0010142_Farnesyl_diphosphate_biosynthetic_process,_mevalonate_pathway


id: GO:0010557
description: Positive regulation of macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010557
golevel: 7
name:
  GOBP.STRING_v12.0_140314_STRINGid_GO:0010557_Positive_regulation_of_macromolecule_biosynthetic_process


id: GO:0010558
description: Negative regulation of macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010558
golevel: 7
name:
  GOBP.STRING_v12.0_140314_STRINGid_GO:0010558_Negative_regulation_of_macromolecule_biosynthetic_process


id: GO:0015318
description: Inorganic molecular entity transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015318
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0015318_Inorganic_molecular_entity_transmembrane_transporter_activity


id: GO:0015415
description: ATPase-coupled phosphate ion transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015415
golevel: 3
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0015415_ATPase-coupled_phosphate_ion_transmembrane_transporter_activity


id: GO:0015446
description: ATPase-coupled arsenite transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015446
golevel: 3
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0015446_ATPase-coupled_arsenite_transmembrane_transporter_activity


id: GO:0015451
description: Decarboxylation-driven active transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015451
golevel: 5
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0015451_Decarboxylation-driven_active_transmembrane_transporter_activity


id: GO:0015658
description: Branched-chain amino acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015658
golevel: 4
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0015658_Branched-chain_amino_acid_transmembrane_transporter_activity


id: GO:0016614
description: Oxidoreductase activity, acting on CH-OH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016614
golevel: 3
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0016614_Oxidoreductase_activity,_acting_on_CH-OH_group_of_donors


id: GO:0016616
description: Oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016616
golevel: 4
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0016616_Oxidoreductase_activity,_acting_on_the_CH-OH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016620
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016620
golevel: 4
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0016620_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016624
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016624
golevel: 4
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0016624_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_disulfide_as_acceptor


id: GO:0016627
description: Oxidoreductase activity, acting on the CH-CH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016627
golevel: 3
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0016627_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors


id: GO:0016628
description: Oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016628
golevel: 4
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0016628_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016634
description: Oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016634
golevel: 4
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0016634_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_oxygen_as_acceptor


id: GO:0016635
memo: https://amigo.geneontology.org/amigo/term/GO:0016635
golevel: 4
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0016635_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_quinone_or_related_compound_as_acceptor

description:
  Oxidoreductase activity, acting on the CH-CH group of donors, quinone or related compound as acceptor


id: GO:0016638
description: Oxidoreductase activity, acting on the CH-NH2 group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016638
golevel: 3
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0016638_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors


id: GO:0016639
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016639
golevel: 4
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0016639_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016641
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016641
golevel: 4
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0016641_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_oxygen_as_acceptor


id: GO:0016642
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016642
golevel: 4
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0016642_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_disulfide_as_acceptor


id: GO:0016645
description: Oxidoreductase activity, acting on the CH-NH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016645
golevel: 3
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0016645_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors


id: GO:0016646
description: Oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016646
golevel: 4
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0016646_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016652
description: Oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016652
golevel: 4
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0016652_Oxidoreductase_activity,_acting_on_NAD(P)H,_NAD(P)_as_acceptor


id: GO:0016655
description: Oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016655
golevel: 4
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0016655_Oxidoreductase_activity,_acting_on_NAD(P)H,_quinone_or_similar_compound_as_acceptor


id: GO:0016657
description: Oxidoreductase activity, acting on NAD(P)H, nitrogenous group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016657
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0016657_Oxidoreductase_activity,_acting_on_NAD(P)H,_nitrogenous_group_as_acceptor


id: GO:0016661
description: Oxidoreductase activity, acting on other nitrogenous compounds as donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016661
golevel: 3
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0016661_Oxidoreductase_activity,_acting_on_other_nitrogenous_compounds_as_donors


id: GO:0016667
description: Oxidoreductase activity, acting on a sulfur group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016667
golevel: 3
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0016667_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors


id: GO:0016668
description: Oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016668
golevel: 4
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0016668_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_NAD(P)_as_acceptor


id: GO:0016671
description: Oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016671
golevel: 4
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0016671_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_disulfide_as_acceptor


id: GO:0016684
description: Oxidoreductase activity, acting on peroxide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016684
golevel: 3
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0016684_Oxidoreductase_activity,_acting_on_peroxide_as_acceptor


id: GO:0016701
description: Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen
memo: https://amigo.geneontology.org/amigo/term/GO:0016701
golevel: 3
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0016701_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen


id: GO:0016703
memo: https://amigo.geneontology.org/amigo/term/GO:0016703
golevel: 4
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0016703_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen,_incorporation_of_one_atom_of_oxygen_(internal_monooxygenases_or_internal_mixed_function_oxidases)

description:
  Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)


id: GO:0016705
memo: https://amigo.geneontology.org/amigo/term/GO:0016705
golevel: 3
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0016705_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen


id: GO:0016721
description: Oxidoreductase activity, acting on superoxide radicals as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016721
golevel: 3
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0016721_Oxidoreductase_activity,_acting_on_superoxide_radicals_as_acceptor


id: GO:0016726
description: Oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016726
golevel: 4
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0016726_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_NAD_or_NADP_as_acceptor


id: GO:0016728
description: Oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016728
golevel: 4
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0016728_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_disulfide_as_acceptor


id: GO:0016730
description: Oxidoreductase activity, acting on iron-sulfur proteins as donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016730
golevel: 3
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0016730_Oxidoreductase_activity,_acting_on_iron-sulfur_proteins_as_donors


id: GO:0016731
description: Oxidoreductase activity, acting on iron-sulfur proteins as donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016731
golevel: 4
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0016731_Oxidoreductase_activity,_acting_on_iron-sulfur_proteins_as_donors,_NAD_or_NADP_as_acceptor


id: GO:0016742
description: Hydroxymethyl-, formyl- and related transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0016742
golevel: 4
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0016742_Hydroxymethyl-,_formyl-_and_related_transferase_activity


id: GO:0016747
description: Acyltransferase activity, transferring groups other than amino-acyl groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016747
golevel: 4
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0016747_Acyltransferase_activity,_transferring_groups_other_than_amino-acyl_groups


id: GO:0016765
description: Transferase activity, transferring alkyl or aryl (other than methyl) groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016765
golevel: 3
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0016765_Transferase_activity,_transferring_alkyl_or_aryl_(other_than_methyl)_groups


id: GO:0016772
description: Transferase activity, transferring phosphorus-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016772
golevel: 3
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0016772_Transferase_activity,_transferring_phosphorus-containing_groups


id: GO:0016774
description: Phosphotransferase activity, carboxyl group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016774
golevel: 4
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0016774_Phosphotransferase_activity,_carboxyl_group_as_acceptor


id: GO:0016775
description: Phosphotransferase activity, nitrogenous group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016775
golevel: 4
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0016775_Phosphotransferase_activity,_nitrogenous_group_as_acceptor


id: GO:0016776
description: Phosphotransferase activity, phosphate group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016776
golevel: 4
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0016776_Phosphotransferase_activity,_phosphate_group_as_acceptor


id: GO:0016780
description: Phosphotransferase activity, for other substituted phosphate groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016780
golevel: 4
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0016780_Phosphotransferase_activity,_for_other_substituted_phosphate_groups


id: GO:0016782
description: Transferase activity, transferring sulphur-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016782
golevel: 3
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0016782_Transferase_activity,_transferring_sulphur-containing_groups


id: GO:0016796
memo: https://amigo.geneontology.org/amigo/term/GO:0016796
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0016796_Exonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_5-phosphomonoesters

description:
  Exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5-phosphomonoesters


id: GO:0016810
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
memo: https://amigo.geneontology.org/amigo/term/GO:0016810
golevel: 3
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0016810_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds


id: GO:0016811
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
memo: https://amigo.geneontology.org/amigo/term/GO:0016811
golevel: 4
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0016811_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_linear_amides


id: GO:0016812
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
memo: https://amigo.geneontology.org/amigo/term/GO:0016812
golevel: 4
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0016812_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_cyclic_amides


id: GO:0016813
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines
memo: https://amigo.geneontology.org/amigo/term/GO:0016813
golevel: 4
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0016813_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_linear_amidines


id: GO:0016814
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines
memo: https://amigo.geneontology.org/amigo/term/GO:0016814
golevel: 4
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0016814_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_cyclic_amidines


id: GO:0016818
description: Hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
memo: https://amigo.geneontology.org/amigo/term/GO:0016818
golevel: 4
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0016818_Hydrolase_activity,_acting_on_acid_anhydrides,_in_phosphorus-containing_anhydrides


id: GO:0016825
description: Hydrolase activity, acting on acid phosphorus-nitrogen bonds
memo: https://amigo.geneontology.org/amigo/term/GO:0016825
golevel: 3
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0016825_Hydrolase_activity,_acting_on_acid_phosphorus-nitrogen_bonds


id: GO:0016837
description: Carbon-oxygen lyase activity, acting on polysaccharides
memo: https://amigo.geneontology.org/amigo/term/GO:0016837
golevel: 4
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0016837_Carbon-oxygen_lyase_activity,_acting_on_polysaccharides


id: GO:0016855
description: Racemase and epimerase activity, acting on amino acids and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0016855
golevel: 4
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0016855_Racemase_and_epimerase_activity,_acting_on_amino_acids_and_derivatives


id: GO:0016857
description: Racemase and epimerase activity, acting on carbohydrates and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0016857
golevel: 4
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0016857_Racemase_and_epimerase_activity,_acting_on_carbohydrates_and_derivatives


id: GO:0016861
description: Intramolecular oxidoreductase activity, interconverting aldoses and ketoses
memo: https://amigo.geneontology.org/amigo/term/GO:0016861
golevel: 4
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0016861_Intramolecular_oxidoreductase_activity,_interconverting_aldoses_and_ketoses


id: GO:0016863
description: Intramolecular oxidoreductase activity, transposing C=C bonds
memo: https://amigo.geneontology.org/amigo/term/GO:0016863
golevel: 4
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0016863_Intramolecular_oxidoreductase_activity,_transposing_C=C_bonds


id: GO:0016868
description: Intramolecular transferase activity, phosphotransferases
memo: https://amigo.geneontology.org/amigo/term/GO:0016868
golevel: 4
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0016868_Intramolecular_transferase_activity,_phosphotransferases


id: GO:0016884
description: Carbon-nitrogen ligase activity, with glutamine as amido-N-donor
memo: https://amigo.geneontology.org/amigo/term/GO:0016884
golevel: 4
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0016884_Carbon-nitrogen_ligase_activity,_with_glutamine_as_amido-N-donor


id: GO:0016888
description: Endodeoxyribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016888
golevel: 4
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0016888_Endodeoxyribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016889
description: Endodeoxyribonuclease activity, producing 3-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016889
golevel: 4
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0016889_Endodeoxyribonuclease_activity,_producing_3-phosphomonoesters


id: GO:0016891
description: Endoribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016891
golevel: 4
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0016891_Endoribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016893
memo: https://amigo.geneontology.org/amigo/term/GO:0016893
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0016893_Endonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_5-phosphomonoesters

description:
  Endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5-phosphomonoesters


id: GO:0016894
memo: https://amigo.geneontology.org/amigo/term/GO:0016894
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0016894_Endonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_3-phosphomonoesters

description:
  Endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3-phosphomonoesters


id: GO:0016895
description: Exodeoxyribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016895
golevel: 6
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0016895_Exodeoxyribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016896
description: Exoribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016896
golevel: 6
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0016896_Exoribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016903
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016903
golevel: 3
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0016903_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors


id: GO:0019171
description: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0019171
golevel: 5
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0019171_3-hydroxyacyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0019219
description: Regulation of nucleobase-containing compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0019219
golevel: 6
name:
  GOBP.STRING_v12.0_140314_STRINGid_GO:0019219_Regulation_of_nucleobase-containing_compound_metabolic_process


id: GO:0019279
description: L-methionine biosynthetic process from L-homoserine via cystathionine
memo: https://amigo.geneontology.org/amigo/term/GO:0019279
golevel: 6
name:
  GOBP.STRING_v12.0_140314_STRINGid_GO:0019279_L-methionine_biosynthetic_process_from_L-homoserine_via_cystathionine


id: GO:0019281
description: L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
memo: https://amigo.geneontology.org/amigo/term/GO:0019281
golevel: 7
name:
  GOBP.STRING_v12.0_140314_STRINGid_GO:0019281_L-methionine_biosynthetic_process_from_homoserine_via_O-succinyl-L-homoserine_and_cystathionine


id: GO:0019287
description: Isopentenyl diphosphate biosynthetic process, mevalonate pathway
memo: https://amigo.geneontology.org/amigo/term/GO:0019287
golevel: 6
name:
  GOBP.STRING_v12.0_140314_STRINGid_GO:0019287_Isopentenyl_diphosphate_biosynthetic_process,_mevalonate_pathway


id: GO:0019829
description: ATPase-coupled cation transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0019829
golevel: 3
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0019829_ATPase-coupled_cation_transmembrane_transporter_activity


id: GO:0022869
description: protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0022869
golevel: 5
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0022869_protein-N(PI)-phosphohistidine-lactose_phosphotransferase_system_transporter_activity


id: GO:0022872
memo: https://amigo.geneontology.org/amigo/term/GO:0022872
golevel: 5
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0022872_protein-N(PI)-phosphohistidine-mannitol_phosphotransferase_system_transmembrane_transporter_activity

description:
  protein-N(PI)-phosphohistidine-mannitol phosphotransferase system transmembrane transporter activity


id: GO:0022877
description: protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0022877
golevel: 5
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0022877_protein-N(PI)-phosphohistidine-fructose_phosphotransferase_system_transporter_activity


id: GO:0030613
description: Oxidoreductase activity, acting on phosphorus or arsenic in donors
memo: https://amigo.geneontology.org/amigo/term/GO:0030613
golevel: 3
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0030613_Oxidoreductase_activity,_acting_on_phosphorus_or_arsenic_in_donors


id: GO:0030614
description: Oxidoreductase activity, acting on phosphorus or arsenic in donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0030614
golevel: 4
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0030614_Oxidoreductase_activity,_acting_on_phosphorus_or_arsenic_in_donors,_disulfide_as_acceptor


id: GO:0030698
description: 5,10-methylenetetrahydrofolate-dependent tRNA (m5U54) methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0030698
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0030698_5,10-methylenetetrahydrofolate-dependent_tRNA_(m5U54)_methyltransferase_activity


id: GO:0031233
description: Intrinsic component of external side of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031233
name:
  GOCC.STRING_v12.0_140314_STRINGid_GO:0031233_Intrinsic_component_of_external_side_of_plasma_membrane


id: GO:0031235
description: Intrinsic component of the cytoplasmic side of the plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031235
name:
  GOCC.STRING_v12.0_140314_STRINGid_GO:0031235_Intrinsic_component_of_the_cytoplasmic_side_of_the_plasma_membrane


id: GO:0031250
description: Anaerobic ribonucleoside-triphosphate reductase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0031250
golevel: 3
name:
  GOCC.STRING_v12.0_140314_STRINGid_GO:0031250_Anaerobic_ribonucleoside-triphosphate_reductase_complex


id: GO:0032105
description: Negative regulation of response to extracellular stimulus
memo: https://amigo.geneontology.org/amigo/term/GO:0032105
name:
  GOBP.STRING_v12.0_140314_STRINGid_GO:0032105_Negative_regulation_of_response_to_extracellular_stimulus


id: GO:0032297
description: Negative regulation of DNA-templated DNA replication initiation
memo: https://amigo.geneontology.org/amigo/term/GO:0032297
golevel: 10
name:
  GOBP.STRING_v12.0_140314_STRINGid_GO:0032297_Negative_regulation_of_DNA-templated_DNA_replication_initiation


id: GO:0032414
description: Positive regulation of ion transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0032414
golevel: 4
name:
  GOBP.STRING_v12.0_140314_STRINGid_GO:0032414_Positive_regulation_of_ion_transmembrane_transporter_activity


id: GO:0033177
description: Proton-transporting two-sector ATPase complex, proton-transporting domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033177
golevel: 3
name:
  GOCC.STRING_v12.0_140314_STRINGid_GO:0033177_Proton-transporting_two-sector_ATPase_complex,_proton-transporting_domain


id: GO:0033178
description: Proton-transporting two-sector ATPase complex, catalytic domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033178
golevel: 3
name:
  GOCC.STRING_v12.0_140314_STRINGid_GO:0033178_Proton-transporting_two-sector_ATPase_complex,_catalytic_domain


id: GO:0033283
description: ATPase-coupled organic acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033283
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0033283_ATPase-coupled_organic_acid_transmembrane_transporter_activity


id: GO:0033284
description: ATPase-coupled carboxylic acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033284
golevel: 3
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0033284_ATPase-coupled_carboxylic_acid_transmembrane_transporter_activity


id: GO:0033668
description: Negative regulation by symbiont of host apoptotic process
memo: https://amigo.geneontology.org/amigo/term/GO:0033668
golevel: 5
name:
  GOBP.STRING_v12.0_140314_STRINGid_GO:0033668_Negative_regulation_by_symbiont_of_host_apoptotic_process


id: GO:0033744
description: L-methionine:thioredoxin-disulfide S-oxidoreductase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033744
golevel: 5
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0033744_L-methionine:thioredoxin-disulfide_S-oxidoreductase_activity


id: GO:0033818
description: Beta-ketoacyl-acyl-carrier-protein synthase III activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033818
golevel: 5
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0033818_Beta-ketoacyl-acyl-carrier-protein_synthase_III_activity


id: GO:0034023
description: 5-(carboxyamino)imidazole ribonucleotide mutase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0034023
golevel: 4
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0034023_5-(carboxyamino)imidazole_ribonucleotide_mutase_activity


id: GO:0034028
description: 5-(carboxyamino)imidazole ribonucleotide synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0034028
golevel: 4
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0034028_5-(carboxyamino)imidazole_ribonucleotide_synthase_activity


id: GO:0034036
description: Purine ribonucleoside bisphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034036
golevel: 6
name:
  GOBP.STRING_v12.0_140314_STRINGid_GO:0034036_Purine_ribonucleoside_bisphosphate_biosynthetic_process


id: GO:0034249
description: Negative regulation of cellular amide metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034249
golevel: 6
name:
  GOBP.STRING_v12.0_140314_STRINGid_GO:0034249_Negative_regulation_of_cellular_amide_metabolic_process


id: GO:0034250
description: Positive regulation of cellular amide metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034250
golevel: 6
name:
  GOBP.STRING_v12.0_140314_STRINGid_GO:0034250_Positive_regulation_of_cellular_amide_metabolic_process


id: GO:0034404
description: Nucleobase-containing small molecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034404
golevel: 5
name:
  GOBP.STRING_v12.0_140314_STRINGid_GO:0034404_Nucleobase-containing_small_molecule_biosynthetic_process


id: GO:0035592
description: Establishment of protein localization to extracellular region
memo: https://amigo.geneontology.org/amigo/term/GO:0035592
golevel: 4
name:
  GOBP.STRING_v12.0_140314_STRINGid_GO:0035592_Establishment_of_protein_localization_to_extracellular_region


id: GO:0035998
description: 7,8-dihydroneopterin 3-triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0035998
name:
  GOBP.STRING_v12.0_140314_STRINGid_GO:0035998_7,8-dihydroneopterin_3-triphosphate_biosynthetic_process


id: GO:0036361
description: Racemase activity, acting on amino acids and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0036361
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0036361_Racemase_activity,_acting_on_amino_acids_and_derivatives


id: GO:0036381
description: Pyridoxal 5-phosphate synthase (glutamine hydrolysing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0036381
golevel: 5
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0036381_Pyridoxal_5-phosphate_synthase_(glutamine_hydrolysing)_activity


id: GO:0042083
description: 5,10-methylenetetrahydrofolate-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0042083
golevel: 5
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0042083_5,10-methylenetetrahydrofolate-dependent_methyltransferase_activity


id: GO:0042084
description: 5-methyltetrahydrofolate-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0042084
golevel: 5
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0042084_5-methyltetrahydrofolate-dependent_methyltransferase_activity


id: GO:0042085
description: 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0042085
golevel: 5
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0042085_5-methyltetrahydropteroyltri-L-glutamate-dependent_methyltransferase_activity


id: GO:0042173
description: Regulation of sporulation resulting in formation of a cellular spore
memo: https://amigo.geneontology.org/amigo/term/GO:0042173
golevel: 5
name:
  GOBP.STRING_v12.0_140314_STRINGid_GO:0042173_Regulation_of_sporulation_resulting_in_formation_of_a_cellular_spore


id: GO:0042174
description: Negative regulation of sporulation resulting in formation of a cellular spore
memo: https://amigo.geneontology.org/amigo/term/GO:0042174
golevel: 6
name:
  GOBP.STRING_v12.0_140314_STRINGid_GO:0042174_Negative_regulation_of_sporulation_resulting_in_formation_of_a_cellular_spore


id: GO:0042777
description: Proton motive force-driven plasma membrane ATP synthesis
memo: https://amigo.geneontology.org/amigo/term/GO:0042777
golevel: 9
name:
  GOBP.STRING_v12.0_140314_STRINGid_GO:0042777_Proton_motive_force-driven_plasma_membrane_ATP_synthesis


id: GO:0043225
description: ATPase-coupled inorganic anion transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0043225
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0043225_ATPase-coupled_inorganic_anion_transmembrane_transporter_activity


id: GO:0043242
description: Negative regulation of protein-containing complex disassembly
memo: https://amigo.geneontology.org/amigo/term/GO:0043242
golevel: 6
name:
  GOBP.STRING_v12.0_140314_STRINGid_GO:0043242_Negative_regulation_of_protein-containing_complex_disassembly


id: GO:0043365
description: [formate-C-acetyltransferase]-activating enzyme activity
memo: https://amigo.geneontology.org/amigo/term/GO:0043365
golevel: 4
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0043365_[formate-C-acetyltransferase]-activating_enzyme_activity


id: GO:0043772
description: Acyl-phosphate glycerol-3-phosphate acyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0043772
golevel: 5
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0043772_Acyl-phosphate_glycerol-3-phosphate_acyltransferase_activity


id: GO:0043811
description: Phosphate:acyl-[acyl carrier protein] acyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0043811
golevel: 5
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0043811_Phosphate:acyl-[acyl_carrier_protein]_acyltransferase_activity


id: GO:0044011
description: Single-species biofilm formation on inanimate substrate
memo: https://amigo.geneontology.org/amigo/term/GO:0044011
golevel: 4
name:
  GOBP.STRING_v12.0_140314_STRINGid_GO:0044011_Single-species_biofilm_formation_on_inanimate_substrate


id: GO:0044419
description: Biological process involved in interspecies interaction between organisms
memo: https://amigo.geneontology.org/amigo/term/GO:0044419
golevel: 1
name:
  GOBP.STRING_v12.0_140314_STRINGid_GO:0044419_Biological_process_involved_in_interspecies_interaction_between_organisms


id: GO:0044769
description: ATPase activity, coupled to transmembrane movement of ions, rotational mechanism
memo: https://amigo.geneontology.org/amigo/term/GO:0044769
golevel: 4
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0044769_ATPase_activity,_coupled_to_transmembrane_movement_of_ions,_rotational_mechanism


id: GO:0045156
memo: https://amigo.geneontology.org/amigo/term/GO:0045156
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0045156_Electron_transporter,_transferring_electrons_within_the_cyclic_electron_transport_pathway_of_photosynthesis_activity

description:
  Electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity


id: GO:0045261
description: Proton-transporting ATP synthase complex, catalytic core F(1)
memo: https://amigo.geneontology.org/amigo/term/GO:0045261
name:
  GOCC.STRING_v12.0_140314_STRINGid_GO:0045261_Proton-transporting_ATP_synthase_complex,_catalytic_core_F(1)


id: GO:0045263
description: Proton-transporting ATP synthase complex, coupling factor F(o)
memo: https://amigo.geneontology.org/amigo/term/GO:0045263
name:
  GOCC.STRING_v12.0_140314_STRINGid_GO:0045263_Proton-transporting_ATP_synthase_complex,_coupling_factor_F(o)


id: GO:0045304
description: Regulation of establishment of competence for transformation
memo: https://amigo.geneontology.org/amigo/term/GO:0045304
golevel: 4
name:
  GOBP.STRING_v12.0_140314_STRINGid_GO:0045304_Regulation_of_establishment_of_competence_for_transformation


id: GO:0045934
description: Negative regulation of nucleobase-containing compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0045934
golevel: 6
name:
  GOBP.STRING_v12.0_140314_STRINGid_GO:0045934_Negative_regulation_of_nucleobase-containing_compound_metabolic_process


id: GO:0045935
description: Positive regulation of nucleobase-containing compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0045935
name:
  GOBP.STRING_v12.0_140314_STRINGid_GO:0045935_Positive_regulation_of_nucleobase-containing_compound_metabolic_process


id: GO:0045982
description: Negative regulation of purine nucleobase metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0045982
golevel: 7
name:
  GOBP.STRING_v12.0_140314_STRINGid_GO:0045982_Negative_regulation_of_purine_nucleobase_metabolic_process


id: GO:0046537
description: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0046537
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0046537_2,3-bisphosphoglycerate-independent_phosphoglycerate_mutase_activity


id: GO:0046538
description: 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0046538
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0046538_2,3-bisphosphoglycerate-dependent_phosphoglycerate_mutase_activity


id: GO:0046857
memo: https://amigo.geneontology.org/amigo/term/GO:0046857
golevel: 4
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0046857_Oxidoreductase_activity,_acting_on_other_nitrogenous_compounds_as_donors,_with_NAD_or_NADP_as_acceptor

description:
  Oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor


id: GO:0046912
description: Acyltransferase activity, acyl groups converted into alkyl on transfer
memo: https://amigo.geneontology.org/amigo/term/GO:0046912
golevel: 4
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0046912_Acyltransferase_activity,_acyl_groups_converted_into_alkyl_on_transfer


id: GO:0046915
description: Transition metal ion transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0046915
golevel: 6
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0046915_Transition_metal_ion_transmembrane_transporter_activity


id: GO:0046933
description: Proton-transporting ATP synthase activity, rotational mechanism
memo: https://amigo.geneontology.org/amigo/term/GO:0046933
golevel: 3
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0046933_Proton-transporting_ATP_synthase_activity,_rotational_mechanism


id: GO:0046961
description: Proton-transporting ATPase activity, rotational mechanism
memo: https://amigo.geneontology.org/amigo/term/GO:0046961
golevel: 4
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0046961_Proton-transporting_ATPase_activity,_rotational_mechanism


id: GO:0047151
description: methylenetetrahydrofolate-tRNA-(uracil-5-)-methyltransferase (FADH2-oxidizing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0047151
golevel: 7
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0047151_methylenetetrahydrofolate-tRNA-(uracil-5-)-methyltransferase_(FADH2-oxidizing)_activity


id: GO:0047324
description: Phosphoenolpyruvate-glycerone phosphotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0047324
golevel: 5
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0047324_Phosphoenolpyruvate-glycerone_phosphotransferase_activity


id: GO:0047451
description: 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0047451
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0047451_3-hydroxyoctanoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0047480
description: UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0047480
golevel: 5
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0047480_UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine_ligase_activity


id: GO:0048646
description: Anatomical structure formation involved in morphogenesis
memo: https://amigo.geneontology.org/amigo/term/GO:0048646
golevel: 2
name:
  GOBP.STRING_v12.0_140314_STRINGid_GO:0048646_Anatomical_structure_formation_involved_in_morphogenesis


id: GO:0050511
description: Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050511
golevel: 6
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0050511_Undecaprenyldiphospho-muramoylpentapeptide_beta-N-acetylglucosaminyltransferase_activity


id: GO:0050515
description: 4-(cytidine 5-diphospho)-2-C-methyl-D-erythritol kinase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050515
golevel: 5
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0050515_4-(cytidine_5-diphospho)-2-C-methyl-D-erythritol_kinase_activity


id: GO:0050566
description: asparaginyl-tRNA synthase (glutamine-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050566
golevel: 5
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0050566_asparaginyl-tRNA_synthase_(glutamine-hydrolyzing)_activity


id: GO:0050567
description: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050567
golevel: 5
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0050567_glutaminyl-tRNA_synthase_(glutamine-hydrolyzing)_activity


id: GO:0051075
description: S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0051075
golevel: 3
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0051075_S-adenosylmethionine:tRNA_ribosyltransferase-isomerase_activity


id: GO:0051172
description: Negative regulation of nitrogen compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0051172
name:
  GOBP.STRING_v12.0_140314_STRINGid_GO:0051172_Negative_regulation_of_nitrogen_compound_metabolic_process


id: GO:0051173
description: Positive regulation of nitrogen compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0051173
name:
  GOBP.STRING_v12.0_140314_STRINGid_GO:0051173_Positive_regulation_of_nitrogen_compound_metabolic_process


id: GO:0051703
description: Biological process involved in intraspecies interaction between organisms
memo: https://amigo.geneontology.org/amigo/term/GO:0051703
golevel: 1
name:
  GOBP.STRING_v12.0_140314_STRINGid_GO:0051703_Biological_process_involved_in_intraspecies_interaction_between_organisms


id: GO:0051748
description: UTP-monosaccharide-1-phosphate uridylyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0051748
golevel: 6
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0051748_UTP-monosaccharide-1-phosphate_uridylyltransferase_activity


id: GO:0051991
memo: https://amigo.geneontology.org/amigo/term/GO:0051991
golevel: 6
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0051991_UDP-N-acetyl-D-glucosamine:N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenol_4-beta-N-acetylglucosaminlytransferase_activity

description:
  UDP-N-acetyl-D-glucosamine:N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenol 4-beta-N-acetylglucosaminlytransferase activity


id: GO:0051992
memo: https://amigo.geneontology.org/amigo/term/GO:0051992
golevel: 5
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0051992_UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine:undecaprenyl-phosphate_transferase_activity

description:
  UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine:undecaprenyl-phosphate transferase activity


id: GO:0052041
description: Negative regulation by symbiont of host programmed cell death
memo: https://amigo.geneontology.org/amigo/term/GO:0052041
golevel: 6
name:
  GOBP.STRING_v12.0_140314_STRINGid_GO:0052041_Negative_regulation_by_symbiont_of_host_programmed_cell_death


id: GO:0052908
description: 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0052908
golevel: 7
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0052908_16S_rRNA_(adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase_activity


id: GO:0052929
description: ATP:3-cytidine-cytidine-tRNA adenylyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0052929
golevel: 5
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0052929_ATP:3-cytidine-cytidine-tRNA_adenylyltransferase_activity


id: GO:0055052
description: ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing
memo: https://amigo.geneontology.org/amigo/term/GO:0055052
golevel: 5
name:
  GOCC.STRING_v12.0_140314_STRINGid_GO:0055052_ATP-binding_cassette_(ABC)_transporter_complex,_substrate-binding_subunit-containing


id: GO:0060567
description: Negative regulation of DNA-templated transcription, termination
memo: https://amigo.geneontology.org/amigo/term/GO:0060567
golevel: 7
name:
  GOBP.STRING_v12.0_140314_STRINGid_GO:0060567_Negative_regulation_of_DNA-templated_transcription,_termination


id: GO:0061695
description: Transferase complex, transferring phosphorus-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0061695
golevel: 4
name:
  GOCC.STRING_v12.0_140314_STRINGid_GO:0061695_Transferase_complex,_transferring_phosphorus-containing_groups


id: GO:0062014
description: Negative regulation of small molecule metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0062014
golevel: 6
name:
  GOBP.STRING_v12.0_140314_STRINGid_GO:0062014_Negative_regulation_of_small_molecule_metabolic_process


id: GO:0070626
memo: https://amigo.geneontology.org/amigo/term/GO:0070626
golevel: 5
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0070626_(S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)_succinate_lyase_(fumarate-forming)_activity

description:
  (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido) succinate lyase (fumarate-forming) activity


id: GO:0070647
description: Protein modification by small protein conjugation or removal
memo: https://amigo.geneontology.org/amigo/term/GO:0070647
golevel: 7
name:
  GOBP.STRING_v12.0_140314_STRINGid_GO:0070647_Protein_modification_by_small_protein_conjugation_or_removal


id: GO:0071951
description: Conversion of methionyl-tRNA to N-formyl-methionyl-tRNA
memo: https://amigo.geneontology.org/amigo/term/GO:0071951
golevel: 8
name:
  GOBP.STRING_v12.0_140314_STRINGid_GO:0071951_Conversion_of_methionyl-tRNA_to_N-formyl-methionyl-tRNA


id: GO:0072586
description: DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) regulator activity
memo: https://amigo.geneontology.org/amigo/term/GO:0072586
golevel: 3
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0072586_DNA_topoisomerase_type_II_(double_strand_cut,_ATP-hydrolyzing)_regulator_activity


id: GO:0072599
description: Establishment of protein localization to endoplasmic reticulum
memo: https://amigo.geneontology.org/amigo/term/GO:0072599
golevel: 5
name:
  GOBP.STRING_v12.0_140314_STRINGid_GO:0072599_Establishment_of_protein_localization_to_endoplasmic_reticulum


id: GO:0097588
description: Archaeal or bacterial-type flagellum-dependent cell motility
memo: https://amigo.geneontology.org/amigo/term/GO:0097588
golevel: 4
name:
  GOBP.STRING_v12.0_140314_STRINGid_GO:0097588_Archaeal_or_bacterial-type_flagellum-dependent_cell_motility


id: GO:0098742
description: Cell-cell adhesion via plasma-membrane adhesion molecules
memo: https://amigo.geneontology.org/amigo/term/GO:0098742
name:
  GOBP.STRING_v12.0_140314_STRINGid_GO:0098742_Cell-cell_adhesion_via_plasma-membrane_adhesion_molecules


id: GO:0102027
description: S-adenosylmethionine:2-demethylquinol-8 methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0102027
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0102027_S-adenosylmethionine:2-demethylquinol-8_methyltransferase_activity


id: GO:0102094
description: S-adenosylmethionine:2-demethylmenaquinol methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0102094
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0102094_S-adenosylmethionine:2-demethylmenaquinol_methyltransferase_activity


id: GO:0102552
description: Lipoyl synthase activity (acting on glycine-cleavage complex H protein
memo: https://amigo.geneontology.org/amigo/term/GO:0102552
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0102552_Lipoyl_synthase_activity_(acting_on_glycine-cleavage_complex_H_protein


id: GO:0102553
description: Lipoyl synthase activity (acting on pyruvate dehydrogenase E2 protein)
memo: https://amigo.geneontology.org/amigo/term/GO:0102553
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0102553_Lipoyl_synthase_activity_(acting_on_pyruvate_dehydrogenase_E2_protein)


id: GO:0102752
memo: https://amigo.geneontology.org/amigo/term/GO:0102752
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0102752_1,4-alpha-glucan_branching_enzyme_activity_(using_a_glucosylated_glycogenin_as_primer_for_glycogen_synthesis)

description:
  1,4-alpha-glucan branching enzyme activity (using a glucosylated glycogenin as primer for glycogen synthesis)


id: GO:0102955
description: S-adenosylmethionine:2-demethylmenaquinol-7 methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0102955
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0102955_S-adenosylmethionine:2-demethylmenaquinol-7_methyltransferase_activity


id: GO:0106074
description: aminoacyl-tRNA metabolism involved in translational fidelity
memo: https://amigo.geneontology.org/amigo/term/GO:0106074
golevel: 4
name:
  GOBP.STRING_v12.0_140314_STRINGid_GO:0106074_aminoacyl-tRNA_metabolism_involved_in_translational_fidelity


id: GO:0140078
description: Class I DNA-(apurinic or apyrimidinic site) endonuclease activity
memo: https://amigo.geneontology.org/amigo/term/GO:0140078
golevel: 4
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:0140078_Class_I_DNA-(apurinic_or_apyrimidinic_site)_endonuclease_activity


id: GO:1900192
description: Positive regulation of single-species biofilm formation
memo: https://amigo.geneontology.org/amigo/term/GO:1900192
golevel: 5
name:
  GOBP.STRING_v12.0_140314_STRINGid_GO:1900192_Positive_regulation_of_single-species_biofilm_formation


id: GO:1900231
description: Regulation of single-species biofilm formation on inanimate substrate
memo: https://amigo.geneontology.org/amigo/term/GO:1900231
golevel: 5
name:
  GOBP.STRING_v12.0_140314_STRINGid_GO:1900231_Regulation_of_single-species_biofilm_formation_on_inanimate_substrate


id: GO:1901505
description: Carbohydrate derivative transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:1901505
golevel: 3
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:1901505_Carbohydrate_derivative_transmembrane_transporter_activity


id: GO:1901618
description: Organic hydroxy compound transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:1901618
name:
  GOMF.STRING_v12.0_140314_STRINGid_GO:1901618_Organic_hydroxy_compound_transmembrane_transporter_activity


id: GO:1901800
description: Positive regulation of proteasomal protein catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:1901800
golevel: 8
name:
  GOBP.STRING_v12.0_140314_STRINGid_GO:1901800_Positive_regulation_of_proteasomal_protein_catabolic_process


id: GO:1903050
description: Regulation of proteolysis involved in protein catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:1903050
golevel: 8
name:
  GOBP.STRING_v12.0_140314_STRINGid_GO:1903050_Regulation_of_proteolysis_involved_in_protein_catabolic_process


id: GO:1903052
description: Positive regulation of proteolysis involved in protein catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:1903052
golevel: 9
name:
  GOBP.STRING_v12.0_140314_STRINGid_GO:1903052_Positive_regulation_of_proteolysis_involved_in_protein_catabolic_process


id: GO:1903507
description: Negative regulation of nucleic acid-templated transcription
memo: https://amigo.geneontology.org/amigo/term/GO:1903507
name:
  GOBP.STRING_v12.0_140314_STRINGid_GO:1903507_Negative_regulation_of_nucleic_acid-templated_transcription


id: GO:1903508
description: Positive regulation of nucleic acid-templated transcription
memo: https://amigo.geneontology.org/amigo/term/GO:1903508
name:
  GOBP.STRING_v12.0_140314_STRINGid_GO:1903508_Positive_regulation_of_nucleic_acid-templated_transcription


id: GO:2000112
description: Regulation of cellular macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:2000112
name:
  GOBP.STRING_v12.0_140314_STRINGid_GO:2000112_Regulation_of_cellular_macromolecule_biosynthetic_process


id: GO:2000113
description: Negative regulation of cellular macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:2000113
name:
  GOBP.STRING_v12.0_140314_STRINGid_GO:2000113_Negative_regulation_of_cellular_macromolecule_biosynthetic_process


id: GO:2000371
description: Regulation of DNA topoisomerase (ATP-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:2000371
name:
  GOBP.STRING_v12.0_140314_STRINGid_GO:2000371_Regulation_of_DNA_topoisomerase_(ATP-hydrolyzing)_activity


id: GO:2000372
description: Negative regulation of DNA topoisomerase (ATP-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:2000372
name:
  GOBP.STRING_v12.0_140314_STRINGid_GO:2000372_Negative_regulation_of_DNA_topoisomerase_(ATP-hydrolyzing)_activity


id: GOCC:0000015
description: Phosphopyruvate hydratase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000015
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_140314_STRINGid_GOCC:0000015_Phosphopyruvate_hydratase_complex


id: GOCC:0000118
description: Histone deacetylase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000118
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_140314_STRINGid_GOCC:0000118_Histone_deacetylase_complex


id: GOCC:0000159
description: Protein phosphatase type 2A complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000159
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_140314_STRINGid_GOCC:0000159_Protein_phosphatase_type_2A_complex


id: GOCC:0000172
description: Ribonuclease MRP complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000172
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_140314_STRINGid_GOCC:0000172_Ribonuclease_MRP_complex


id: GOCC:0000221
description: Vacuolar proton-transporting V-type ATPase, V1 domain
memo: https://amigo.geneontology.org/amigo/term/GO:0000221
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_140314_STRINGid_GOCC:0000221_Vacuolar_proton-transporting_V-type_ATPase,_V1_domain


id: GOCC:0000228
description: Nuclear chromosome
memo: https://amigo.geneontology.org/amigo/term/GO:0000228
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_140314_STRINGid_GOCC:0000228_Nuclear_chromosome


id: GOCC:0000325
description: Plant-type vacuole
memo: https://amigo.geneontology.org/amigo/term/GO:0000325
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_140314_STRINGid_GOCC:0000325_Plant-type_vacuole


id: GOCC:0000428
description: DNA-directed RNA polymerase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000428
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_140314_STRINGid_GOCC:0000428_DNA-directed_RNA_polymerase_complex


id: GOCC:0000502
description: Proteasome complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000502
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_140314_STRINGid_GOCC:0000502_Proteasome_complex


id: GOCC:0000781
description: Chromosome, telomeric region
memo: https://amigo.geneontology.org/amigo/term/GO:0000781
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_140314_STRINGid_GOCC:0000781_Chromosome,_telomeric_region


id: GOCC:0000930
description: Gamma-tubulin complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000930
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_140314_STRINGid_GOCC:0000930_Gamma-tubulin_complex


id: GOCC:0000931
description: Gamma-tubulin large complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000931
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_140314_STRINGid_GOCC:0000931_Gamma-tubulin_large_complex


id: GOCC:0002189
description: Ribose phosphate diphosphokinase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0002189
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_140314_STRINGid_GOCC:0002189_Ribose_phosphate_diphosphokinase_complex


id: GOCC:0005576
description: Extracellular region
memo: https://amigo.geneontology.org/amigo/term/GO:0005576
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_140314_STRINGid_GOCC:0005576_Extracellular_region


id: GOCC:0005615
description: Extracellular space
memo: https://amigo.geneontology.org/amigo/term/GO:0005615
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_140314_STRINGid_GOCC:0005615_Extracellular_space


id: GOCC:0005727
description: Extrachromosomal circular DNA
memo: https://amigo.geneontology.org/amigo/term/GO:0005727
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_140314_STRINGid_GOCC:0005727_Extrachromosomal_circular_DNA


id: GOCC:0005732
description: Small nucleolar ribonucleoprotein complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005732
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_140314_STRINGid_GOCC:0005732_Small_nucleolar_ribonucleoprotein_complex


id: GOCC:0005740
description: Mitochondrial envelope
memo: https://amigo.geneontology.org/amigo/term/GO:0005740
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_140314_STRINGid_GOCC:0005740_Mitochondrial_envelope


id: GOCC:0005743
description: Mitochondrial inner membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0005743
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_140314_STRINGid_GOCC:0005743_Mitochondrial_inner_membrane


id: GOCC:0005746
description: Mitochondrial respirasome
memo: https://amigo.geneontology.org/amigo/term/GO:0005746
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_140314_STRINGid_GOCC:0005746_Mitochondrial_respirasome


id: GOCC:0005747
description: Mitochondrial respiratory chain complex I
memo: https://amigo.geneontology.org/amigo/term/GO:0005747
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_140314_STRINGid_GOCC:0005747_Mitochondrial_respiratory_chain_complex_I


id: GOCC:0005759
description: Mitochondrial matrix
memo: https://amigo.geneontology.org/amigo/term/GO:0005759
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_140314_STRINGid_GOCC:0005759_Mitochondrial_matrix


id: GOCC:0005771
description: Multivesicular body
memo: https://amigo.geneontology.org/amigo/term/GO:0005771
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_140314_STRINGid_GOCC:0005771_Multivesicular_body


id: GOCC:0005778
description: Peroxisomal membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0005778
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_140314_STRINGid_GOCC:0005778_Peroxisomal_membrane


id: GOCC:0005783
description: Endoplasmic reticulum
memo: https://amigo.geneontology.org/amigo/term/GO:0005783
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_140314_STRINGid_GOCC:0005783_Endoplasmic_reticulum


id: GOCC:0005788
description: Endoplasmic reticulum lumen
memo: https://amigo.geneontology.org/amigo/term/GO:0005788
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_140314_STRINGid_GOCC:0005788_Endoplasmic_reticulum_lumen


id: GOCC:0005789
description: Endoplasmic reticulum membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0005789
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_140314_STRINGid_GOCC:0005789_Endoplasmic_reticulum_membrane


id: GOCC:0005793
description: Endoplasmic reticulum-Golgi intermediate compartment
memo: https://amigo.geneontology.org/amigo/term/GO:0005793
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_140314_STRINGid_GOCC:0005793_Endoplasmic_reticulum-Golgi_intermediate_compartment


id: GOCC:0005798
description: Golgi-associated vesicle
memo: https://amigo.geneontology.org/amigo/term/GO:0005798
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_140314_STRINGid_GOCC:0005798_Golgi-associated_vesicle


id: GOCC:0005815
description: Microtubule organizing center
memo: https://amigo.geneontology.org/amigo/term/GO:0005815
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_140314_STRINGid_GOCC:0005815_Microtubule_organizing_center


id: GOCC:0005835
description: Fatty acid synthase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005835
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_140314_STRINGid_GOCC:0005835_Fatty_acid_synthase_complex


id: GOCC:0005839
description: Proteasome core complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005839
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_140314_STRINGid_GOCC:0005839_Proteasome_core_complex


id: GOCC:0005882
description: Intermediate filament
memo: https://amigo.geneontology.org/amigo/term/GO:0005882
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_140314_STRINGid_GOCC:0005882_Intermediate_filament


id: GOCC:0005887
description: Integral component of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0005887
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_140314_STRINGid_GOCC:0005887_Integral_component_of_plasma_membrane


id: GOCC:0005911
description: Cell-cell junction
memo: https://amigo.geneontology.org/amigo/term/GO:0005911
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_140314_STRINGid_GOCC:0005911_Cell-cell_junction


id: GOCC:0005945
description: 6-phosphofructokinase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005945
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_140314_STRINGid_GOCC:0005945_6-phosphofructokinase_complex


id: GOCC:0005948
description: Acetolactate synthase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005948
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_140314_STRINGid_GOCC:0005948_Acetolactate_synthase_complex


id: GOCC:0005951
description: Carbamoyl-phosphate synthase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005951
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_140314_STRINGid_GOCC:0005951_Carbamoyl-phosphate_synthase_complex


id: GOCC:0005960
description: Glycine cleavage complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005960
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_140314_STRINGid_GOCC:0005960_Glycine_cleavage_complex


id: GOCC:0005963
description: Magnesium-dependent protein serine/threonine phosphatase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005963
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_140314_STRINGid_GOCC:0005963_Magnesium-dependent_protein_serine/threonine_phosphatase_complex


id: GOCC:0005971
description: Ribonucleoside-diphosphate reductase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005971
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_140314_STRINGid_GOCC:0005971_Ribonucleoside-diphosphate_reductase_complex


id: GOCC:0008076
description: Voltage-gated potassium channel complex
memo: https://amigo.geneontology.org/amigo/term/GO:0008076
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_140314_STRINGid_GOCC:0008076_Voltage-gated_potassium_channel_complex


id: GOCC:0008287
description: Protein serine/threonine phosphatase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0008287
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_140314_STRINGid_GOCC:0008287_Protein_serine/threonine_phosphatase_complex


id: GOCC:0009279
description: Cell outer membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0009279
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_140314_STRINGid_GOCC:0009279_Cell_outer_membrane


id: GOCC:0009288
description: Bacterial-type flagellum
memo: https://amigo.geneontology.org/amigo/term/GO:0009288
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_140314_STRINGid_GOCC:0009288_Bacterial-type_flagellum


id: GOCC:0009316
description: 3-isopropylmalate dehydratase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009316
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_140314_STRINGid_GOCC:0009316_3-isopropylmalate_dehydratase_complex


id: GOCC:0009317
description: acetyl-CoA carboxylase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009317
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_140314_STRINGid_GOCC:0009317_acetyl-CoA_carboxylase_complex


id: GOCC:0009318
description: Exodeoxyribonuclease VII complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009318
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_140314_STRINGid_GOCC:0009318_Exodeoxyribonuclease_VII_complex


id: GOCC:0009321
description: Alkyl hydroperoxide reductase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009321
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_140314_STRINGid_GOCC:0009321_Alkyl_hydroperoxide_reductase_complex


id: GOCC:0009326
description: Formate dehydrogenase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009326
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_140314_STRINGid_GOCC:0009326_Formate_dehydrogenase_complex


id: GOCC:0009328
description: phenylalanine-tRNA ligase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009328
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_140314_STRINGid_GOCC:0009328_phenylalanine-tRNA_ligase_complex


id: GOCC:0009330
description: DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009330
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_140314_STRINGid_GOCC:0009330_DNA_topoisomerase_type_II_(double_strand_cut,_ATP-hydrolyzing)_complex


id: GOCC:0009331
description: glycerol-3-phosphate dehydrogenase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009331
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_140314_STRINGid_GOCC:0009331_glycerol-3-phosphate_dehydrogenase_complex


id: GOCC:0009338
description: Exodeoxyribonuclease V complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009338
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_140314_STRINGid_GOCC:0009338_Exodeoxyribonuclease_V_complex


id: GOCC:0009339
description: Glycolate oxidase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009339
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_140314_STRINGid_GOCC:0009339_Glycolate_oxidase_complex


id: GOCC:0009341
description: Beta-galactosidase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009341
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_140314_STRINGid_GOCC:0009341_Beta-galactosidase_complex


id: GOCC:0009345
description: glycine-tRNA ligase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009345
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_140314_STRINGid_GOCC:0009345_glycine-tRNA_ligase_complex


id: GOCC:0009346
description: Citrate lyase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009346
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_140314_STRINGid_GOCC:0009346_Citrate_lyase_complex


id: GOCC:0009347
description: Aspartate carbamoyltransferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009347
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_140314_STRINGid_GOCC:0009347_Aspartate_carbamoyltransferase_complex


id: GOCC:0009349
description: Riboflavin synthase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009349
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_140314_STRINGid_GOCC:0009349_Riboflavin_synthase_complex


id: GOCC:0009358
description: Polyphosphate kinase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009358
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_140314_STRINGid_GOCC:0009358_Polyphosphate_kinase_complex


id: GOCC:0009360
description: DNA polymerase III complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009360
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_140314_STRINGid_GOCC:0009360_DNA_polymerase_III_complex


id: GOCC:0009361
description: succinate-CoA ligase complex (ADP-forming)
memo: https://amigo.geneontology.org/amigo/term/GO:0009361
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_140314_STRINGid_GOCC:0009361_succinate-CoA_ligase_complex_(ADP-forming)


id: GOCC:0009366
description: Enterobactin synthetase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009366
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_140314_STRINGid_GOCC:0009366_Enterobactin_synthetase_complex


id: GOCC:0009376
description: HslUV protease complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009376
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_140314_STRINGid_GOCC:0009376_HslUV_protease_complex


id: GOCC:0009379
description: Holliday junction helicase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009379
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_140314_STRINGid_GOCC:0009379_Holliday_junction_helicase_complex


id: GOCC:0009380
description: Excinuclease repair complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009380
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_140314_STRINGid_GOCC:0009380_Excinuclease_repair_complex


id: GOCC:0009420
description: Bacterial-type flagellum filament
memo: https://amigo.geneontology.org/amigo/term/GO:0009420
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_140314_STRINGid_GOCC:0009420_Bacterial-type_flagellum_filament


