# geneInfo

ensembl_gene_id: SAMN05444409_0003
symbol: SIN73624.1
gene_biotype: protein_coding
description:
  23S rRNA m(5)U-1939 methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.


ensembl_gene_id: SAMN05444409_0012
symbol: fmt
gene_biotype: protein_coding
description:
  methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.


ensembl_gene_id: SAMN05444409_0020
symbol: SIN73851.1
gene_biotype: protein_coding
description:
  FKBP-type peptidyl-prolyl cis-trans isomerase FkpA/FKBP-type peptidyl-prolyl cis-trans isomerase FklB.


ensembl_gene_id: SAMN05444409_0022
symbol: clpB
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease ATP-binding subunit ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.


ensembl_gene_id: SAMN05444409_0026
symbol: SIN73936.1
gene_biotype: protein_coding
description:
  2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.


ensembl_gene_id: SAMN05444409_0037
symbol: aroQ
gene_biotype: protein_coding
description:
  3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.


ensembl_gene_id: SAMN05444409_0053
symbol: purA
gene_biotype: protein_coding
description:
  Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.


ensembl_gene_id: SAMN05444409_0057
symbol: ruvB
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase subunit RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.


ensembl_gene_id: SAMN05444409_0060
symbol: coaE
gene_biotype: protein_coding
description:
  dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.


ensembl_gene_id: SAMN05444409_0063
symbol: ftsY
gene_biotype: protein_coding
description:
  Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC).


ensembl_gene_id: SAMN05444409_0066
symbol: rpmB
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L28; Manually curated; Belongs to the bacterial ribosomal protein bL28 family.


ensembl_gene_id: SAMN05444409_0071
symbol: tsf
gene_biotype: protein_coding
description:
  Translation elongation factor Ts (EF-Ts); Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.


ensembl_gene_id: SAMN05444409_0074
symbol: trmB
gene_biotype: protein_coding
description:
  tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.


ensembl_gene_id: SAMN05444409_0077
symbol: SIN74698.1
gene_biotype: protein_coding
description:
  Dihydrofolate reductase; Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis.


ensembl_gene_id: SAMN05444409_0078
symbol: recR
gene_biotype: protein_coding
description:
  DNA replication and repair protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.


ensembl_gene_id: SAMN05444409_0086
symbol: dapB
gene_biotype: protein_coding
description:
  Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.


ensembl_gene_id: SAMN05444409_0115
symbol: SIN75249.1
gene_biotype: protein_coding
description:
  Sodium/proton antiporter, CPA1 family; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family.


ensembl_gene_id: SAMN05444409_0125
symbol: rnc
gene_biotype: protein_coding
description:
  RNAse III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.


ensembl_gene_id: SAMN05444409_0126
symbol: SIN75425.1
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.


ensembl_gene_id: SAMN05444409_0144
symbol: ffh
gene_biotype: protein_coding
description:
  Signal recognition particle subunit FFH/SRP54 (srp54); Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily.


ensembl_gene_id: SAMN05444409_0148
symbol: atpB
gene_biotype: protein_coding
description:
  ATP synthase F0 subcomplex A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.


ensembl_gene_id: SAMN05444409_0149
symbol: atpE
gene_biotype: protein_coding
description:
  ATP synthase F0 subcomplex C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: SAMN05444409_0150
symbol: atpF
gene_biotype: protein_coding
description:
  F-type H+-transporting ATPase subunit b; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.


ensembl_gene_id: SAMN05444409_0151
symbol: atpH
gene_biotype: protein_coding
description:
  F-type H+-transporting ATPase subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: SAMN05444409_0152
symbol: atpA
gene_biotype: protein_coding
description:
  F-type H+-transporting ATPase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.


ensembl_gene_id: SAMN05444409_0153
symbol: atpG
gene_biotype: protein_coding
description:
  ATP synthase F1 subcomplex gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.


ensembl_gene_id: SAMN05444409_0158
symbol: dinB
gene_biotype: protein_coding
description:
  DNA polymerase-4; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.


ensembl_gene_id: SAMN05444409_0164
symbol: rplT
gene_biotype: protein_coding
description:
  LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.


ensembl_gene_id: SAMN05444409_0166
symbol: infC
gene_biotype: protein_coding
description:
  Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.


ensembl_gene_id: SAMN05444409_0167
symbol: thrS
gene_biotype: protein_coding
description:
  threonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr).


ensembl_gene_id: SAMN05444409_0170
symbol: leuC
gene_biotype: protein_coding
description:
  3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.


ensembl_gene_id: SAMN05444409_0171
symbol: leuD
gene_biotype: protein_coding
description:
  3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily.


ensembl_gene_id: SAMN05444409_0172
symbol: leuB
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.


ensembl_gene_id: SAMN05444409_0189
symbol: lnt
gene_biotype: protein_coding
description:
  Apolipoprotein N-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily.


ensembl_gene_id: SAMN05444409_0220
symbol: pyrG
gene_biotype: protein_coding
description:
  CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.


ensembl_gene_id: SAMN05444409_0221
symbol: yidC
gene_biotype: protein_coding
description:
  YidC/Oxa1 family membrane protein insertase; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins.


ensembl_gene_id: SAMN05444409_0222
symbol: trmH
gene_biotype: protein_coding
description:
  tRNA (guanosine-2'-O-)-methyltransferase; Catalyzes the 2'-O methylation of guanosine at position 18 in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: SAMN05444409_0225
symbol: SIN76986.1
gene_biotype: protein_coding
description:
  16S rRNA (uracil1498-N3)-methyltransferase; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.


ensembl_gene_id: SAMN05444409_0229
symbol: tsaD
gene_biotype: protein_coding
description:
  N6-L-threonylcarbamoyladenine synthase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.


ensembl_gene_id: SAMN05444409_0237
symbol: radA
gene_biotype: protein_coding
description:
  DNA repair protein RadA/Sms; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.


ensembl_gene_id: SAMN05444409_0244
symbol: ahcY
gene_biotype: protein_coding
description:
  Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.


ensembl_gene_id: SAMN05444409_0254
symbol: SIN77475.1
gene_biotype: protein_coding
description:
  Hydrophobe/amphiphile efflux-1 (HAE1) family protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: SAMN05444409_0255
symbol: SIN77493.1
gene_biotype: protein_coding
description:
  Membrane fusion protein, multidrug efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: SAMN05444409_0257
symbol: SIN77526.1
gene_biotype: protein_coding
description:
  4'-phosphopantetheinyl transferase superfamily protein; Belongs to the P-Pant transferase superfamily.


ensembl_gene_id: SAMN05444409_0263
symbol: murF
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.


ensembl_gene_id: SAMN05444409_0266
symbol: SIN77677.1
gene_biotype: protein_coding
description:
  anhydro-N-acetylmuramic acid kinase; Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the anhydro-N-acetylmuramic acid kinase family.


ensembl_gene_id: SAMN05444409_0274
symbol: SIN77812.1
gene_biotype: protein_coding
description:
  MFS transporter, DHA2 family, multidrug resistance protein; Belongs to the major facilitator superfamily.


ensembl_gene_id: SAMN05444409_0285
symbol: ligA
gene_biotype: protein_coding
description:
  DNA ligase (NAD+); DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA.


ensembl_gene_id: SAMN05444409_0287
symbol: SIN78008.1
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier protein] reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: SAMN05444409_0296
symbol: fabH
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] synthase-3; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.


ensembl_gene_id: SAMN05444409_0322
symbol: obg
gene_biotype: protein_coding
description:
  GTP-binding protein; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.


ensembl_gene_id: SAMN05444409_0323
symbol: adk
gene_biotype: protein_coding
description:
  Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.


ensembl_gene_id: SAMN05444409_0326
symbol: SIN78555.1
gene_biotype: protein_coding
description:
  Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: SAMN05444409_0329
symbol: SIN78602.1
gene_biotype: protein_coding
description:
  Oxygen-independent coproporphyrinogen-3 oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: SAMN05444409_0331
symbol: SIN78632.1
gene_biotype: protein_coding
description:
  DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: SAMN05444409_0353
symbol: nuoN
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family.


ensembl_gene_id: SAMN05444409_0356
symbol: nuoK
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit K; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family.


ensembl_gene_id: SAMN05444409_0357
symbol: SIN78994.1
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit J; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: SAMN05444409_0358
symbol: nuoI
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: SAMN05444409_0359
symbol: nuoH
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit H; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone.


ensembl_gene_id: SAMN05444409_0362
symbol: SIN79070.1
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family.


ensembl_gene_id: SAMN05444409_0364
symbol: nuoD
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family.


ensembl_gene_id: SAMN05444409_0365
symbol: SIN79113.1
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit C; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 30 kDa subunit family.


ensembl_gene_id: SAMN05444409_0367
symbol: nuoB
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit B; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: SAMN05444409_0368
symbol: nuoA
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit A; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family.


ensembl_gene_id: SAMN05444409_0383
symbol: pyrE
gene_biotype: protein_coding
description:
  Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).


ensembl_gene_id: SAMN05444409_0396
symbol: tilS
gene_biotype: protein_coding
description:
  tRNA(Ile)-lysidine synthase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.


ensembl_gene_id: SAMN05444409_0407
symbol: era
gene_biotype: protein_coding
description:
  GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.


ensembl_gene_id: SAMN05444409_0411
symbol: SIN79847.1
gene_biotype: protein_coding
description:
  L-lysine 6-transaminase precursor; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: SAMN05444409_0415
symbol: SIN79897.1
gene_biotype: protein_coding
description:
  2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase; Belongs to the transferase hexapeptide repeat family.


ensembl_gene_id: SAMN05444409_0420
symbol: SIN79968.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.


ensembl_gene_id: SAMN05444409_0422
symbol: SIN79998.1
gene_biotype: protein_coding
description:
  3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).


ensembl_gene_id: SAMN05444409_0429
symbol: recF
gene_biotype: protein_coding
description:
  DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family.


ensembl_gene_id: SAMN05444409_0432
symbol: SIN80135.1
gene_biotype: protein_coding
description:
  Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: SAMN05444409_0450
symbol: SIN80361.1
gene_biotype: protein_coding
description:
  DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains.


ensembl_gene_id: SAMN05444409_0457
symbol: gpmI
gene_biotype: protein_coding
description:
  Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.


ensembl_gene_id: SAMN05444409_0461
symbol: map
gene_biotype: protein_coding
description:
  Methionyl aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.


ensembl_gene_id: SAMN05444409_0466
symbol: SIN80552.1
gene_biotype: protein_coding
description:
  Hydrophobic/amphiphilic exporter-1, HAE1 family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: SAMN05444409_0479
symbol: metG
gene_biotype: protein_coding
description:
  methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.


ensembl_gene_id: SAMN05444409_0493
symbol: ilvE
gene_biotype: protein_coding
description:
  Branched-chain amino acid aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: SAMN05444409_0497
symbol: ilvC
gene_biotype: protein_coding
description:
  Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate.


ensembl_gene_id: SAMN05444409_0500
symbol: ilvA
gene_biotype: protein_coding
description:
  L-threonine ammonia-lyase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA.


ensembl_gene_id: SAMN05444409_0512
symbol: SIN81080.1
gene_biotype: protein_coding
description:
  Putative TIM-barrel protein, nifR3 family; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.


ensembl_gene_id: SAMN05444409_0515
symbol: rlmF
gene_biotype: protein_coding
description:
  23S rRNA m(6)A-1618 methyltransferase; Specifically methylates the adenine in position 1618 of 23S rRNA.


ensembl_gene_id: SAMN05444409_0522
symbol: gyrB
gene_biotype: protein_coding
description:
  DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: SAMN05444409_0528
symbol: lpxD
gene_biotype: protein_coding
description:
  UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily.


ensembl_gene_id: SAMN05444409_0529
symbol: lpxC
gene_biotype: protein_coding
description:
  3-hydroxyacyl-[acyl-carrier-protein] dehydratase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the thioester dehydratase family. FabZ subfamily.


ensembl_gene_id: SAMN05444409_0530
symbol: SIN81306.1
gene_biotype: protein_coding
description:
  acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: SAMN05444409_0531
symbol: efp
gene_biotype: protein_coding
description:
  Translation elongation factor P (EF-P); Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.


ensembl_gene_id: SAMN05444409_0534
symbol: sucD
gene_biotype: protein_coding
description:
  succinyl-CoA synthetase alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.


ensembl_gene_id: SAMN05444409_0536
symbol: recA
gene_biotype: protein_coding
description:
  Recombination protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.


ensembl_gene_id: SAMN05444409_0537
symbol: SIN81386.1
gene_biotype: protein_coding
description:
  Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: SAMN05444409_0538
symbol: pfkA
gene_biotype: protein_coding
description:
  6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.


ensembl_gene_id: SAMN05444409_0539
symbol: mdh
gene_biotype: protein_coding
description:
  Malate dehydrogenase (NAD); Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.


ensembl_gene_id: SAMN05444409_0553
symbol: SIN81587.1
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.


ensembl_gene_id: SAMN05444409_0555
symbol: prmA
gene_biotype: protein_coding
description:
  Ribosomal protein L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family.


ensembl_gene_id: SAMN05444409_0565
symbol: mtgA
gene_biotype: protein_coding
description:
  Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family.


ensembl_gene_id: SAMN05444409_0568
symbol: ychF
gene_biotype: protein_coding
description:
  Hypothetical protein; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.


ensembl_gene_id: SAMN05444409_0577
symbol: SIN81838.1
gene_biotype: protein_coding
description:
  tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family; Belongs to the SUA5 family.


ensembl_gene_id: SAMN05444409_0583
symbol: mscL
gene_biotype: protein_coding
description:
  Large conductance mechanosensitive channel; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell.


ensembl_gene_id: SAMN05444409_0584
symbol: nnrD
gene_biotype: protein_coding
description:
  NAD(P)H-hydrate epimerase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration.  Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of bot [...]


ensembl_gene_id: SAMN05444409_0586
symbol: SIN81937.1
gene_biotype: protein_coding
description:
  Cell division transport system permease protein; Required for cell division and gliding motility. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.


ensembl_gene_id: SAMN05444409_0588
symbol: uppP
gene_biotype: protein_coding
description:
  Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.


ensembl_gene_id: SAMN05444409_0589
symbol: truB
gene_biotype: protein_coding
description:
  tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.


ensembl_gene_id: SAMN05444409_0603
symbol: SIN82160.1
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence.


ensembl_gene_id: SAMN05444409_0619
symbol: menG
gene_biotype: protein_coding
description:
  Demethylmenaquinone methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2).


ensembl_gene_id: SAMN05444409_0621
symbol: SIN82402.1
gene_biotype: protein_coding
description:
  Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.


ensembl_gene_id: SAMN05444409_0624
symbol: SIN82439.1
gene_biotype: protein_coding
description:
  NAD+ synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source.


ensembl_gene_id: SAMN05444409_0634
symbol: SIN82577.1
gene_biotype: protein_coding
description:
  NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: SAMN05444409_0645
symbol: SIN82727.1
gene_biotype: protein_coding
description:
  Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family.


ensembl_gene_id: SAMN05444409_0662
symbol: kduI
gene_biotype: protein_coding
description:
  4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family.


ensembl_gene_id: SAMN05444409_0681
symbol: grpE
gene_biotype: protein_coding
description:
  Molecular chaperone GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP [...]


ensembl_gene_id: SAMN05444409_0682
symbol: dnaJ
gene_biotype: protein_coding
description:
  Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...]


ensembl_gene_id: SAMN05444409_0687
symbol: lgt
gene_biotype: protein_coding
description:
  Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.


ensembl_gene_id: SAMN05444409_0688
symbol: SIN83443.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.


ensembl_gene_id: SAMN05444409_0704
symbol: SIN83709.1
gene_biotype: protein_coding
description:
  RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: SAMN05444409_0716
symbol: SIN83935.1
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate carboxylase, type 1; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle.


ensembl_gene_id: SAMN05444409_0719
symbol: frr
gene_biotype: protein_coding
description:
  Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.


ensembl_gene_id: SAMN05444409_0730
symbol: SIN84210.1
gene_biotype: protein_coding
description:
  2-oxoglutarate dehydrogenase E2 component; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2).


ensembl_gene_id: SAMN05444409_0732
symbol: dnaX
gene_biotype: protein_coding
description:
  DNA polymerase-3 subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: SAMN05444409_0739
symbol: rsgA
gene_biotype: protein_coding
description:
  Ribosome biogenesis GTPase; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.


ensembl_gene_id: SAMN05444409_0742
symbol: proS
gene_biotype: protein_coding
description:
  prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro).


ensembl_gene_id: SAMN05444409_0744
symbol: mntH
gene_biotype: protein_coding
description:
  Manganese transport protein; H(+)-stimulated, divalent metal cation uptake system. Belongs to the NRAMP family.


ensembl_gene_id: SAMN05444409_0746
symbol: tal
gene_biotype: protein_coding
description:
  Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.


ensembl_gene_id: SAMN05444409_0748
symbol: gyrA
gene_biotype: protein_coding
description:
  DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: SAMN05444409_0751
symbol: pnp
gene_biotype: protein_coding
description:
  Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.


ensembl_gene_id: SAMN05444409_0771
symbol: queG
gene_biotype: protein_coding
description:
  Epoxyqueuosine reductase; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr); Belongs to the QueG family.


ensembl_gene_id: SAMN05444409_0775
symbol: alaS
gene_biotype: protein_coding
description:
  alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.


ensembl_gene_id: SAMN05444409_0783
symbol: ku
gene_biotype: protein_coding
description:
  DNA end-binding protein Ku; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.


ensembl_gene_id: SAMN05444409_0820
symbol: pheS
gene_biotype: protein_coding
description:
  phenylalanyl-tRNA synthetase, alpha subunit; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.


ensembl_gene_id: SAMN05444409_0838
symbol: glgB
gene_biotype: protein_coding
description:
  1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.


ensembl_gene_id: SAMN05444409_0859
symbol: rbfA
gene_biotype: protein_coding
description:
  Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.


ensembl_gene_id: SAMN05444409_0868
symbol: tyrS
gene_biotype: protein_coding
description:
  tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily.


ensembl_gene_id: SAMN05444409_0871
symbol: mnmE
gene_biotype: protein_coding
description:
  tRNA modification GTPase; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.


ensembl_gene_id: SAMN05444409_0922
symbol: SIN87878.1
gene_biotype: protein_coding
description:
  Aryl-phospho-beta-D-glucosidase BglC, GH1 family; Belongs to the glycosyl hydrolase 5 (cellulase A) family.


ensembl_gene_id: SAMN05444409_0951
symbol: SIN88446.1
gene_biotype: protein_coding
description:
  D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: SAMN05444409_0983
symbol: rlmN
gene_biotype: protein_coding
description:
  23S rRNA m(2)A-2503 methyltransferase; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family.


ensembl_gene_id: SAMN05444409_0990
symbol: queA
gene_biotype: protein_coding
description:
  S-adenosylmethionine--tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).


ensembl_gene_id: SAMN05444409_0995
symbol: purF
gene_biotype: protein_coding
description:
  Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.


ensembl_gene_id: SAMN05444409_0997
symbol: ndk
gene_biotype: protein_coding
description:
  Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.


ensembl_gene_id: SAMN05444409_1006
symbol: prfB
gene_biotype: protein_coding
description:
  Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.


ensembl_gene_id: SAMN05444409_1048
symbol: pdhA
gene_biotype: protein_coding
description:
  Pyruvate dehydrogenase E1 component alpha subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).


ensembl_gene_id: SAMN05444409_1206
symbol: kdpA
gene_biotype: protein_coding
description:
  K+-transporting ATPase ATPase A chain; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane.


ensembl_gene_id: SAMN05444409_1207
symbol: kdpB
gene_biotype: protein_coding
description:
  K+-transporting ATPase ATPase B chain; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system. Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IA subfamily.


ensembl_gene_id: SAMN05444409_1208
symbol: kdpC
gene_biotype: protein_coding
description:
  K+-transporting ATPase ATPase C chain; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP-binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB/KdpC/ATP ternary complex.


ensembl_gene_id: SAMN05444409_1248
symbol: SIN94121.1
gene_biotype: protein_coding
description:
  NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: SAMN05444409_1266
symbol: SIN94487.1
gene_biotype: protein_coding
description:
  D-alanyl-lipoteichoic acid acyltransferase DltB, MBOAT superfamily; Belongs to the membrane-bound acyltransferase family.


ensembl_gene_id: SAMN05444409_1271
symbol: rsmG
gene_biotype: protein_coding
description:
  16S rRNA (guanine527-N7)-methyltransferase; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.


ensembl_gene_id: SAMN05444409_1298
symbol: rpsR
gene_biotype: protein_coding
description:
  SSU ribosomal protein S18P; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.


ensembl_gene_id: SAMN05444409_1302
symbol: SIN95288.1
gene_biotype: protein_coding
description:
  Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives.


ensembl_gene_id: SAMN05444409_1307
symbol: tpiA
gene_biotype: protein_coding
description:
  Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.


ensembl_gene_id: SAMN05444409_1328
symbol: polA
gene_biotype: protein_coding
description:
  DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.


ensembl_gene_id: SAMN05444409_1338
symbol: lolD
gene_biotype: protein_coding
description:
  Lipoprotein-releasing system ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.


ensembl_gene_id: SAMN05444409_1349
symbol: prfC
gene_biotype: protein_coding
description:
  Bacterial peptide chain release factor 3 (bRF-3); Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.


ensembl_gene_id: SAMN05444409_1365
symbol: SIN96581.1
gene_biotype: protein_coding
description:
  2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.


ensembl_gene_id: SAMN05444409_1377
symbol: atpD
gene_biotype: protein_coding
description:
  F-type H+-transporting ATPase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.


ensembl_gene_id: SAMN05444409_1382
symbol: kdsB
gene_biotype: protein_coding
description:
  3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase); Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria.


ensembl_gene_id: SAMN05444409_1392
symbol: menA
gene_biotype: protein_coding
description:
  1,4-dihydroxy-2-naphthoate prenyltransferase; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily.


ensembl_gene_id: SAMN05444409_1394
symbol: menB
gene_biotype: protein_coding
description:
  1,4-Dihydroxy-2-naphthoyl-CoA synthase; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA); Belongs to the enoyl-CoA hydratase/isomerase family. MenB subfamily.


ensembl_gene_id: SAMN05444409_1399
symbol: SIN97190.1
gene_biotype: protein_coding
description:
  Dinuclear metal center protein, YbgI/SA1388 family; Belongs to the GTP cyclohydrolase I type 2/NIF3 family.


ensembl_gene_id: SAMN05444409_1416
symbol: rnz
gene_biotype: protein_coding
description:
  RNAse Z; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family.


ensembl_gene_id: SAMN05444409_1417
symbol: SIN97544.1
gene_biotype: protein_coding
description:
  XTP/dITP diphosphohydrolase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.


ensembl_gene_id: SAMN05444409_1586
symbol: thiM
gene_biotype: protein_coding
description:
  Hydroxyethylthiazole kinase; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family.


ensembl_gene_id: SAMN05444409_1587
symbol: thiE
gene_biotype: protein_coding
description:
  Thiamine-phosphate diphosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.


ensembl_gene_id: SAMN05444409_1589
symbol: SIO01185.1
gene_biotype: protein_coding
description:
  Thiaminase; Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway; Belongs to the TenA family.


ensembl_gene_id: SAMN05444409_1614
symbol: SIO01741.1
gene_biotype: protein_coding
description:
  Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.


ensembl_gene_id: SAMN05444409_1634
symbol: SIO02180.1
gene_biotype: protein_coding
description:
  MFS transporter, sugar porter (SP) family; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.


ensembl_gene_id: SAMN05444409_1652
symbol: SIO02573.1
gene_biotype: protein_coding
description:
  cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases; Manually curated.


ensembl_gene_id: SAMN05444409_1688
symbol: purU
gene_biotype: protein_coding
description:
  Formyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4).


ensembl_gene_id: SAMN05444409_1718
symbol: serC
gene_biotype: protein_coding
description:
  Phosphoserine aminotransferase apoenzyme; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily.


ensembl_gene_id: SAMN05444409_1725
symbol: SIO04184.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: SAMN05444409_1733
symbol: tatC
gene_biotype: protein_coding
description:
  Sec-independent protein translocase protein TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes.


ensembl_gene_id: SAMN05444409_1735
symbol: tpx
gene_biotype: protein_coding
description:
  Thiol peroxidase (atypical 2-Cys peroxiredoxin); Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Tpx subfamily.


ensembl_gene_id: SAMN05444409_1749
symbol: SIO04752.1
gene_biotype: protein_coding
description:
  Ribosomal large subunit pseudouridine synthase B; Belongs to the pseudouridine synthase RsuA family.


ensembl_gene_id: SAMN05444409_1758
symbol: SIO04955.1
gene_biotype: protein_coding
description:
  Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: SAMN05444409_1775
symbol: trpD
gene_biotype: protein_coding
description:
  Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).


ensembl_gene_id: SAMN05444409_1781
symbol: trpB
gene_biotype: protein_coding
description:
  Tryptophan synthase, beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.


ensembl_gene_id: SAMN05444409_1782
symbol: trpA
gene_biotype: protein_coding
description:
  Tryptophan synthase, alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.


ensembl_gene_id: SAMN05444409_1788
symbol: def
gene_biotype: protein_coding
description:
  Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. Belongs to the polypeptide deformylase family.


ensembl_gene_id: SAMN05444409_1790
symbol: SIO05668.1
gene_biotype: protein_coding
description:
  Cobalt-zinc-cadmium resistance protein CzcA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: SAMN05444409_1791
symbol: SIO05694.1
gene_biotype: protein_coding
description:
  Membrane fusion protein, cobalt-zinc-cadmium efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: SAMN05444409_1806
symbol: lipB
gene_biotype: protein_coding
description:
  Lipoyl(octanoyl) transferase; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate.


ensembl_gene_id: SAMN05444409_1830
symbol: pdxJ
gene_biotype: protein_coding
description:
  Pyridoxine 5'-phosphate synthase; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate.


ensembl_gene_id: SAMN05444409_1834
symbol: ung
gene_biotype: protein_coding
description:
  Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.


ensembl_gene_id: SAMN05444409_1838
symbol: rsmA
gene_biotype: protein_coding
description:
  16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.


ensembl_gene_id: SAMN05444409_1844
symbol: SIO06799.1
gene_biotype: protein_coding
description:
  Por secretion system C-terminal sorting domain-containing protein; Belongs to the peptidase S8 family.


ensembl_gene_id: SAMN05444409_1846
symbol: zwf
gene_biotype: protein_coding
description:
  Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.


ensembl_gene_id: SAMN05444409_1847
symbol: SIO06865.1
gene_biotype: protein_coding
description:
  6-phosphogluconate dehydrogenase (decarboxylating); Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.


ensembl_gene_id: SAMN05444409_1880
symbol: SIO07518.1
gene_biotype: protein_coding
description:
  D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4).


ensembl_gene_id: SAMN05444409_1898
symbol: SIO07917.1
gene_biotype: protein_coding
description:
  Two-component response regulator, YesN/AraC family, consists of REC and AraC-type DNA-binding domains.


ensembl_gene_id: SAMN05444409_1902
symbol: purN
gene_biotype: protein_coding
description:
  Phosphoribosylglycinamide formyltransferase-1; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.


ensembl_gene_id: SAMN05444409_1919
symbol: SIO08353.1
gene_biotype: protein_coding
description:
  Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.


ensembl_gene_id: SAMN05444409_2025
symbol: SIO10494.1
gene_biotype: protein_coding
description:
  Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family.


ensembl_gene_id: SAMN05444409_2135
symbol: SIO12509.1
gene_biotype: protein_coding
description:
  23S rRNA (guanosine2251-2'-O)-methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: SAMN05444409_2141
symbol: rpsO
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.


ensembl_gene_id: SAMN05444409_2143
symbol: thrB
gene_biotype: protein_coding
description:
  Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily.


ensembl_gene_id: SAMN05444409_2164
symbol: clpP
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease, protease subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: SAMN05444409_2165
symbol: dnaG
gene_biotype: protein_coding
description:
  DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Belongs to the DnaG primase family.


ensembl_gene_id: SAMN05444409_2174
symbol: purE
gene_biotype: protein_coding
description:
  5-(carboxyamino)imidazole ribonucleotide mutase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).


ensembl_gene_id: SAMN05444409_2177
symbol: purK
gene_biotype: protein_coding
description:
  5-(carboxyamino)imidazole ribonucleotide synthase; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR).


ensembl_gene_id: SAMN05444409_2197
symbol: SIO13641.1
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.


ensembl_gene_id: SAMN05444409_2204
symbol: SIO13784.1
gene_biotype: protein_coding
description:
  HDIG domain-containing protein; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.


ensembl_gene_id: SAMN05444409_2218
symbol: thyA
gene_biotype: protein_coding
description:
  Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis.


ensembl_gene_id: SAMN05444409_2228
symbol: rplS
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.


ensembl_gene_id: SAMN05444409_2229
symbol: kbl
gene_biotype: protein_coding
description:
  2-amino-3-ketobutyrate coenzyme A ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA.


ensembl_gene_id: SAMN05444409_2232
symbol: priA
gene_biotype: protein_coding
description:
  Replication restart DNA helicase PriA; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.


ensembl_gene_id: SAMN05444409_2237
symbol: SIO14389.1
gene_biotype: protein_coding
description:
  Putative holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.


ensembl_gene_id: SAMN05444409_2238
symbol: def-2
gene_biotype: protein_coding
description:
  Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.


ensembl_gene_id: SAMN05444409_2301
symbol: SIO15704.1
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS2; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity. Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.


ensembl_gene_id: SAMN05444409_2305
symbol: SIO15791.1
gene_biotype: protein_coding
description:
  Aerobic C4-dicarboxylate transport protein; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: SAMN05444409_2306
symbol: SIO15811.1
gene_biotype: protein_coding
description:
  Protein-tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.


ensembl_gene_id: SAMN05444409_2307
symbol: dnaA
gene_biotype: protein_coding
description:
  Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.


ensembl_gene_id: SAMN05444409_2317
symbol: SIO16023.1
gene_biotype: protein_coding
description:
  Carboxylate-amine ligase; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily.


ensembl_gene_id: SAMN05444409_2323
symbol: SIO16156.1
gene_biotype: protein_coding
description:
  Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E.


ensembl_gene_id: SAMN05444409_2346
symbol: SIO16650.1
gene_biotype: protein_coding
description:
  Methylated-DNA--protein-cysteine methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated. Belongs to the MGMT family.


ensembl_gene_id: SAMN05444409_2357
symbol: pyrB
gene_biotype: protein_coding
description:
  Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.


ensembl_gene_id: SAMN05444409_2362
symbol: argB
gene_biotype: protein_coding
description:
  N-acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.


ensembl_gene_id: SAMN05444409_2363
symbol: SIO17011.1
gene_biotype: protein_coding
description:
  Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.


ensembl_gene_id: SAMN05444409_2364
symbol: SIO17033.1
gene_biotype: protein_coding
description:
  Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: SAMN05444409_2365
symbol: argC
gene_biotype: protein_coding
description:
  N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.


ensembl_gene_id: SAMN05444409_2368
symbol: SIO17124.1
gene_biotype: protein_coding
description:
  Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA.


ensembl_gene_id: SAMN05444409_2373
symbol: SIO17233.1
gene_biotype: protein_coding
description:
  RNA polymerase sigma-70 factor, ECF subfamily; Non-canonical start codon; manually curated; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: SAMN05444409_2399
symbol: SIO17823.1
gene_biotype: protein_coding
description:
  Oxygen-independent coproporphyrinogen-3 oxidase; Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: SAMN05444409_2402
symbol: pheT
gene_biotype: protein_coding
description:
  phenylalanyl-tRNA synthetase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.


ensembl_gene_id: SAMN05444409_2403
symbol: SIO17901.1
gene_biotype: protein_coding
description:
  DNA polymerase-3 subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...]


ensembl_gene_id: SAMN05444409_2406
symbol: coaD
gene_biotype: protein_coding
description:
  Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.


ensembl_gene_id: SAMN05444409_2414
symbol: groS
gene_biotype: protein_coding
description:
  Chaperonin GroES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.


ensembl_gene_id: SAMN05444409_2415
symbol: groL
gene_biotype: protein_coding
description:
  Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.


ensembl_gene_id: SAMN05444409_2417
symbol: map-2
gene_biotype: protein_coding
description:
  Methionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.


ensembl_gene_id: SAMN05444409_2418
symbol: rlpA
gene_biotype: protein_coding
description:
  Rare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.


ensembl_gene_id: SAMN05444409_2419
symbol: rimO
gene_biotype: protein_coding
description:
  SSU ribosomal protein S12P methylthiotransferase; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.


ensembl_gene_id: SAMN05444409_2421
symbol: SIO18260.1
gene_biotype: protein_coding
description:
  dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.


ensembl_gene_id: SAMN05444409_2438
symbol: SIO18625.1
gene_biotype: protein_coding
description:
  NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC.


ensembl_gene_id: SAMN05444409_2476
symbol: SIO28963.1
gene_biotype: protein_coding
description:
  3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.


ensembl_gene_id: SAMN05444409_2481
symbol: guaB
gene_biotype: protein_coding
description:
  Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.


ensembl_gene_id: SAMN05444409_2490
symbol: hemH
gene_biotype: protein_coding
description:
  Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.


ensembl_gene_id: SAMN05444409_2494
symbol: ruvC
gene_biotype: protein_coding
description:
  Holliday junction endonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.


ensembl_gene_id: SAMN05444409_2512
symbol: SIO29481.1
gene_biotype: protein_coding
description:
  Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.


ensembl_gene_id: SAMN05444409_2525
symbol: rplU
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.


ensembl_gene_id: SAMN05444409_2529
symbol: smpB
gene_biotype: protein_coding
description:
  SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...]


ensembl_gene_id: SAMN05444409_2540
symbol: hemA
gene_biotype: protein_coding
description:
  glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).


ensembl_gene_id: SAMN05444409_2541
symbol: SIO29835.1
gene_biotype: protein_coding
description:
  Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.


ensembl_gene_id: SAMN05444409_2543
symbol: hemE
gene_biotype: protein_coding
description:
  Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.


ensembl_gene_id: SAMN05444409_2558
symbol: hflX
gene_biotype: protein_coding
description:
  GTP-binding protein HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.


ensembl_gene_id: SAMN05444409_2577
symbol: SIO30334.1
gene_biotype: protein_coding
description:
  Dihydrofolate synthase / folylpolyglutamate synthase; Belongs to the folylpolyglutamate synthase family.


ensembl_gene_id: SAMN05444409_2584
symbol: pepT
gene_biotype: protein_coding
description:
  Tripeptide aminopeptidase; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family.


ensembl_gene_id: SAMN05444409_2605
symbol: tadA
gene_biotype: protein_coding
description:
  tRNA(adenine34) deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: SAMN05444409_2607
symbol: coaX
gene_biotype: protein_coding
description:
  Type III pantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.


ensembl_gene_id: SAMN05444409_2616
symbol: lepA
gene_biotype: protein_coding
description:
  GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.


ensembl_gene_id: SAMN05444409_2618
symbol: SIO30864.1
gene_biotype: protein_coding
description:
  RNA polymerase Rpb6; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.


ensembl_gene_id: SAMN05444409_2619
symbol: SIO30874.1
gene_biotype: protein_coding
description:
  Phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.


ensembl_gene_id: SAMN05444409_2621
symbol: SIO30895.1
gene_biotype: protein_coding
description:
  DNA repair protein RecN (Recombination protein N); May be involved in recombinational repair of damaged DNA.


ensembl_gene_id: SAMN05444409_2623
symbol: rplY
gene_biotype: protein_coding
description:
  LSU ribosomal protein L25P; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.


ensembl_gene_id: SAMN05444409_2627
symbol: ftsZ
gene_biotype: protein_coding
description:
  Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.


ensembl_gene_id: SAMN05444409_2628
symbol: ftsA
gene_biotype: protein_coding
description:
  Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.


ensembl_gene_id: SAMN05444409_2633
symbol: murG
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine-N- acetylmuramylpentapeptide N-acetylglucosamine transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.


ensembl_gene_id: SAMN05444409_2635
symbol: murD
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.


ensembl_gene_id: SAMN05444409_2636
symbol: mraY
gene_biotype: protein_coding
description:
  Phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.


ensembl_gene_id: SAMN05444409_2637
symbol: murE
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily.


ensembl_gene_id: SAMN05444409_2640
symbol: rsmH
gene_biotype: protein_coding
description:
  16S rRNA (cytosine1402-N4)-methyltransferase; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.


ensembl_gene_id: SAMN05444409_2649
symbol: asd
gene_biotype: protein_coding
description:
  Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.


ensembl_gene_id: SAMN05444409_2650
symbol: SIO31211.1
gene_biotype: protein_coding
description:
  Cation diffusion facilitator family transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.


ensembl_gene_id: SAMN05444409_2665
symbol: rnpA
gene_biotype: protein_coding
description:
  Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.


ensembl_gene_id: SAMN05444409_2671
symbol: prfA
gene_biotype: protein_coding
description:
  Bacterial peptide chain release factor 1 (bRF-1); Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.


ensembl_gene_id: SAMN05444409_2674
symbol: fumC
gene_biotype: protein_coding
description:
  Fumarase, class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.


ensembl_gene_id: SAMN05444409_2681
symbol: SIO31571.1
gene_biotype: protein_coding
description:
  Primary replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.


ensembl_gene_id: SAMN05444409_2689
symbol: engB
gene_biotype: protein_coding
description:
  GTP-binding protein; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.


ensembl_gene_id: SAMN05444409_2691
symbol: SIO31706.1
gene_biotype: protein_coding
description:
  tRNA (cytidine/uridine-2'-O-)-methyltransferase; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.


ensembl_gene_id: SAMN05444409_2695
symbol: metN
gene_biotype: protein_coding
description:
  D-methionine transport system ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.


ensembl_gene_id: SAMN05444409_2700
symbol: accD
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase carboxyl transferase subunit beta; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA.


ensembl_gene_id: SAMN05444409_2701
symbol: SIO31836.1
gene_biotype: protein_coding
description:
  Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family.


ensembl_gene_id: SAMN05444409_2702
symbol: nadK
gene_biotype: protein_coding
description:
  NAD+ kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.


ensembl_gene_id: SAMN05444409_2709
symbol: glyQS
gene_biotype: protein_coding
description:
  glycyl-tRNA synthetase; Catalyzes the attachment of glycine to tRNA(Gly). Belongs to the class-II aminoacyl-tRNA synthetase family.


ensembl_gene_id: SAMN05444409_2714
symbol: pyrD
gene_biotype: protein_coding
description:
  Dihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.


ensembl_gene_id: SAMN05444409_2730
symbol: uvrB
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate  [...]


ensembl_gene_id: SAMN05444409_2739
symbol: menD
gene_biotype: protein_coding
description:
  2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Belongs to the TPP enzyme family. MenD subfamily.


ensembl_gene_id: SAMN05444409_2748
symbol: mnmA
gene_biotype: protein_coding
description:
  tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.


ensembl_gene_id: SAMN05444409_2771
symbol: surE
gene_biotype: protein_coding
description:
  5'-nucleotidase /3'-nucleotidase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.


ensembl_gene_id: SAMN05444409_2774
symbol: lysA
gene_biotype: protein_coding
description:
  Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.


ensembl_gene_id: SAMN05444409_2778
symbol: SIO32824.1
gene_biotype: protein_coding
description:
  Delta-60 repeat domain-containing protein/Por secretion system C-terminal sorting domain-containing protein.


ensembl_gene_id: SAMN05444409_2791
symbol: rnr
gene_biotype: protein_coding
description:
  RNAse R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.


ensembl_gene_id: SAMN05444409_2795
symbol: mnmG
gene_biotype: protein_coding
description:
  tRNA uridine 5-carboxymethylaminomethyl modification enzyme; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.


ensembl_gene_id: SAMN05444409_2797
symbol: ybeY
gene_biotype: protein_coding
description:
  rRNA maturation RNase YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.


ensembl_gene_id: SAMN05444409_2799
symbol: SIO33089.1
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.


ensembl_gene_id: SAMN05444409_2802
symbol: rsmI
gene_biotype: protein_coding
description:
  16S rRNA (cytidine1402-2'-O)-methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.


ensembl_gene_id: SAMN05444409_2804
symbol: SIO33155.1
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: SAMN05444409_2809
symbol: guaC
gene_biotype: protein_coding
description:
  GMP reductase; Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides.


ensembl_gene_id: SAMN05444409_2830
symbol: SIO33484.1
gene_biotype: protein_coding
description:
  Uncharacterized conserved protein YaaN involved in tellurite resistance; Belongs to the TelA family.


ensembl_gene_id: SAMN05444409_2842
symbol: folD
gene_biotype: protein_coding
description:
  Methylenetetrahydrofolate dehydrogenase (NADP+); Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.


ensembl_gene_id: SAMN05444409_2843
symbol: queE
gene_biotype: protein_coding
description:
  Organic radical activating enzyme; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds.


ensembl_gene_id: SAMN05444409_2851
symbol: thiL
gene_biotype: protein_coding
description:
  Thiamine-phosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family.


ensembl_gene_id: SAMN05444409_2863
symbol: mutS
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.


ensembl_gene_id: SAMN05444409_2895
symbol: SIO34268.1
gene_biotype: protein_coding
description:
  Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.


ensembl_gene_id: SAMN05444409_2899
symbol: pth
gene_biotype: protein_coding
description:
  peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.


ensembl_gene_id: SAMN05444409_2901
symbol: mfd
gene_biotype: protein_coding
description:
  Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.


ensembl_gene_id: SAMN05444409_2912
symbol: secA
gene_biotype: protein_coding
description:
  Protein translocase subunit secA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane.


ensembl_gene_id: SAMN05444409_2917
symbol: msrA
gene_biotype: protein_coding
description:
  Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.


ensembl_gene_id: SAMN05444409_2927
symbol: SIO34690.1
gene_biotype: protein_coding
description:
  Septum formation protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.


ensembl_gene_id: SAMN05444409_2935
symbol: mutL
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.


ensembl_gene_id: SAMN05444409_2943
symbol: SIO34864.1
gene_biotype: protein_coding
description:
  Cysteine desulfurase /L-selenocysteine selenide-lyase (L-alanine-forming); Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.


ensembl_gene_id: SAMN05444409_2944
symbol: lon
gene_biotype: protein_coding
description:
  ATP-dependent Lon protease; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.


ensembl_gene_id: SAMN05444409_2945
symbol: SIO34888.1
gene_biotype: protein_coding
description:
  Por secretion system C-terminal sorting domain-containing protein; Belongs to the agmatine deiminase family.


ensembl_gene_id: SAMN05444409_2951
symbol: ftsH
gene_biotype: protein_coding
description:
  Cell division protease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family.  In the central section; belongs to the AAA ATPase family.


ensembl_gene_id: SAMN05444409_2952
symbol: rsfS
gene_biotype: protein_coding
description:
  Ribosome-associated protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.


ensembl_gene_id: SAMN05444409_2953
symbol: SIO34975.1
gene_biotype: protein_coding
description:
  BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase.


ensembl_gene_id: SAMN05444409_2955
symbol: tgt
gene_biotype: protein_coding
description:
  tRNA-guanine transglycosylase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the [...]


ensembl_gene_id: SAMN05444409_2972
symbol: SIO35175.1
gene_biotype: protein_coding
description:
  UDP-N-acetyl-D-galactosamine dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.


ensembl_gene_id: SAMN05444409_2982
symbol: gmd
gene_biotype: protein_coding
description:
  GDPmannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.


ensembl_gene_id: SAMN05444409_2984
symbol: fcl
gene_biotype: protein_coding
description:
  GDP-L-fucose synthase; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction.


ensembl_gene_id: SAMN05444409_2989
symbol: SIO35372.1
gene_biotype: protein_coding
description:
  Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.


ensembl_gene_id: SAMN05444409_2990
symbol: SIO35383.1
gene_biotype: protein_coding
description:
  dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.


ensembl_gene_id: SAMN05444409_2992
symbol: rimP
gene_biotype: protein_coding
description:
  Ribosome maturation factor RimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.


ensembl_gene_id: SAMN05444409_2994
symbol: infB
gene_biotype: protein_coding
description:
  Bacterial translation initiation factor 2 (bIF-2); One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.


ensembl_gene_id: SAMN05444409_3004
symbol: pckA
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate carboxykinase (ATP); Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA.


ensembl_gene_id: SAMN05444409_3009
symbol: rho
gene_biotype: protein_coding
description:
  Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.


ensembl_gene_id: SAMN05444409_3020
symbol: SIO35728.1
gene_biotype: protein_coding
description:
  5-hydroxyisourate hydrolase; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.


ensembl_gene_id: SAMN05444409_3031
symbol: miaB
gene_biotype: protein_coding
description:
  tRNA-i(6)A37 thiotransferase enzyme MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.


ensembl_gene_id: SAMN05444409_3041
symbol: metZ
gene_biotype: protein_coding
description:
  O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide.


ensembl_gene_id: SAMN05444409_3043
symbol: SIO36007.1
gene_biotype: protein_coding
description:
  Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.


ensembl_gene_id: SAMN05444409_3044
symbol: SIO36019.1
gene_biotype: protein_coding
description:
  5,10-methylenetetrahydrofolate reductase (NAD(P)); Belongs to the methylenetetrahydrofolate reductase family.


ensembl_gene_id: SAMN05444409_3046
symbol: hutG
gene_biotype: protein_coding
description:
  Formiminoglutamase; Catalyzes the conversion of N-formimidoyl-L-glutamate to L- glutamate and formamide; Belongs to the arginase family.


ensembl_gene_id: SAMN05444409_3051
symbol: miaA
gene_biotype: protein_coding
description:
  tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.


ensembl_gene_id: SAMN05444409_3054
symbol: xerC
gene_biotype: protein_coding
description:
  Integrase/recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.


ensembl_gene_id: SAMN05444409_3058
symbol: eno
gene_biotype: protein_coding
description:
  Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.


ensembl_gene_id: SAMN05444409_3068
symbol: nadD
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).


ensembl_gene_id: SAMN05444409_3076
symbol: SIO36409.1
gene_biotype: protein_coding
description:
  LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: SAMN05444409_3077
symbol: metK
gene_biotype: protein_coding
description:
  Methionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.


ensembl_gene_id: SAMN05444409_3087
symbol: lspA
gene_biotype: protein_coding
description:
  Signal peptidase II; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.


ensembl_gene_id: SAMN05444409_3091
symbol: ileS
gene_biotype: protein_coding
description:
  Isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 2 subfamily.


ensembl_gene_id: SAMN05444409_3097
symbol: SIO36691.1
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] synthase-1; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.


ensembl_gene_id: SAMN05444409_3098
symbol: acpP-2
gene_biotype: protein_coding
description:
  Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.


ensembl_gene_id: SAMN05444409_3109
symbol: SIO36826.1
gene_biotype: protein_coding
description:
  3-oxoacyl-(acyl-carrier-protein) synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.


ensembl_gene_id: SAMN05444409_3129
symbol: topA
gene_biotype: protein_coding
description:
  DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]


ensembl_gene_id: SAMN05444409_3139
symbol: SIO37212.1
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase.


ensembl_gene_id: SAMN05444409_3143
symbol: SIO37261.1
gene_biotype: protein_coding
description:
  Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.


ensembl_gene_id: SAMN05444409_3148
symbol: SIO37313.1
gene_biotype: protein_coding
description:
  dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.


ensembl_gene_id: SAMN05444409_3152
symbol: aat
gene_biotype: protein_coding
description:
  leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine.


ensembl_gene_id: SAMN05444409_3182
symbol: ribH
gene_biotype: protein_coding
description:
  6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.


ensembl_gene_id: SAMN05444409_3184
symbol: apt
gene_biotype: protein_coding
description:
  Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.


ensembl_gene_id: SAMN05444409_3200
symbol: panB
gene_biotype: protein_coding
description:
  Ketopantoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family.


ensembl_gene_id: SAMN05444409_3235
symbol: icmF
gene_biotype: protein_coding
description:
  methylmalonyl-CoA mutase; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly.


ensembl_gene_id: SAMN05444409_3241
symbol: rpsL
gene_biotype: protein_coding
description:
  SSU ribosomal protein S12P; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.


ensembl_gene_id: SAMN05444409_3242
symbol: rpsG
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.


ensembl_gene_id: SAMN05444409_3243
symbol: fusA
gene_biotype: protein_coding
description:
  Elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.


ensembl_gene_id: SAMN05444409_3244
symbol: rpsJ
gene_biotype: protein_coding
description:
  SSU ribosomal protein S10P; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.


ensembl_gene_id: SAMN05444409_3249
symbol: rplC
gene_biotype: protein_coding
description:
  LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.


ensembl_gene_id: SAMN05444409_3251
symbol: rplW
gene_biotype: protein_coding
description:
  LSU ribosomal protein L23P; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.


ensembl_gene_id: SAMN05444409_3252
symbol: rplB
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.


ensembl_gene_id: SAMN05444409_3253
symbol: rpsS
gene_biotype: protein_coding
description:
  SSU ribosomal protein S19P; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.


ensembl_gene_id: SAMN05444409_3254
symbol: rplV
gene_biotype: protein_coding
description:
  LSU ribosomal protein L22P; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.


ensembl_gene_id: SAMN05444409_3255
symbol: rpsC
gene_biotype: protein_coding
description:
  SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.


ensembl_gene_id: SAMN05444409_3256
symbol: rplP
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.


ensembl_gene_id: SAMN05444409_3258
symbol: rpsQ
gene_biotype: protein_coding
description:
  SSU ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.


ensembl_gene_id: SAMN05444409_3259
symbol: rplN
gene_biotype: protein_coding
description:
  LSU ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.


ensembl_gene_id: SAMN05444409_3260
symbol: rplX
gene_biotype: protein_coding
description:
  LSU ribosomal protein L24P; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.


ensembl_gene_id: SAMN05444409_3261
symbol: rplE
gene_biotype: protein_coding
description:
  LSU ribosomal protein L5P; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.


ensembl_gene_id: SAMN05444409_3262
symbol: rpsN
gene_biotype: protein_coding
description:
  SSU ribosomal protein S14P; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.


ensembl_gene_id: SAMN05444409_3263
symbol: rpsH
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.


ensembl_gene_id: SAMN05444409_3264
symbol: rplF
gene_biotype: protein_coding
description:
  LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.


ensembl_gene_id: SAMN05444409_3265
symbol: rplR
gene_biotype: protein_coding
description:
  LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.


ensembl_gene_id: SAMN05444409_3266
symbol: rpsE
gene_biotype: protein_coding
description:
  SSU ribosomal protein S5P; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.


ensembl_gene_id: SAMN05444409_3268
symbol: rplO
gene_biotype: protein_coding
description:
  LSU ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.


ensembl_gene_id: SAMN05444409_3269
symbol: secY
gene_biotype: protein_coding
description:
  Protein translocase subunit secY/sec61 alpha; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.


ensembl_gene_id: SAMN05444409_3270
symbol: infA
gene_biotype: protein_coding
description:
  Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.


ensembl_gene_id: SAMN05444409_3272
symbol: rpsM
gene_biotype: protein_coding
description:
  SSU ribosomal protein S13P; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.


ensembl_gene_id: SAMN05444409_3273
symbol: rpsK
gene_biotype: protein_coding
description:
  SSU ribosomal protein S11P; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.


ensembl_gene_id: SAMN05444409_3274
symbol: rpsD
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.


ensembl_gene_id: SAMN05444409_3275
symbol: rpoA
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: SAMN05444409_3299
symbol: glyA
gene_biotype: protein_coding
description:
  Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.


ensembl_gene_id: SAMN05444409_3322
symbol: sucC
gene_biotype: protein_coding
description:
  succinyl-CoA synthetase beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.


ensembl_gene_id: SAMN05444409_3350
symbol: SIO39907.1
gene_biotype: protein_coding
description:
  Por secretion system C-terminal sorting domain-containing protein; Belongs to the glycosyl hydrolase 13 family.


ensembl_gene_id: SAMN05444409_3352
symbol: SIO39928.1
gene_biotype: protein_coding
description:
  Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.


ensembl_gene_id: SAMN05444409_3364
symbol: SIO40046.1
gene_biotype: protein_coding
description:
  Purine-nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.


ensembl_gene_id: SAMN05444409_3365
symbol: lpxK
gene_biotype: protein_coding
description:
  lipid-A-disaccharide kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).


ensembl_gene_id: SAMN05444409_3370
symbol: nadA
gene_biotype: protein_coding
description:
  Quinolinate synthetase; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.


ensembl_gene_id: SAMN05444409_3372
symbol: SIO40136.1
gene_biotype: protein_coding
description:
  Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.


ensembl_gene_id: SAMN05444409_3374
symbol: dtd
gene_biotype: protein_coding
description:
  D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family.


ensembl_gene_id: SAMN05444409_3376
symbol: greA
gene_biotype: protein_coding
description:
  Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.


ensembl_gene_id: SAMN05444409_3378
symbol: SIO40209.1
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.


ensembl_gene_id: SAMN05444409_3390
symbol: ruvA
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase subunit RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.


ensembl_gene_id: SAMN05444409_3392
symbol: gcvH
gene_biotype: protein_coding
description:
  Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.


ensembl_gene_id: SAMN05444409_3400
symbol: der
gene_biotype: protein_coding
description:
  GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.


ensembl_gene_id: SAMN05444409_3405
symbol: murA
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.


ensembl_gene_id: SAMN05444409_3415
symbol: proC
gene_biotype: protein_coding
description:
  Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.


ensembl_gene_id: SAMN05444409_3418
symbol: SIO43782.1
gene_biotype: protein_coding
description:
  GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.


ensembl_gene_id: SAMN05444409_3419
symbol: nhaA
gene_biotype: protein_coding
description:
  Sodium/proton antiporter, NhaA family; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family.


ensembl_gene_id: SAMN05444409_3422
symbol: rlmH
gene_biotype: protein_coding
description:
  23S rRNA (pseudouridine1915-N3)-methyltransferase; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.


ensembl_gene_id: SAMN05444409_3424
symbol: tatA
gene_biotype: protein_coding
description:
  Sec-independent protein translocase protein TatB; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.


ensembl_gene_id: SAMN05444409_3427
symbol: secD
gene_biotype: protein_coding
description:
  SecD/SecF fusion protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.


ensembl_gene_id: SAMN05444409_3445
symbol: SIO44098.1
gene_biotype: protein_coding
description:
  Alkylhydroperoxidase AhpD family core domain-containing protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.


ensembl_gene_id: SAMN05444409_3449
symbol: SIO44135.1
gene_biotype: protein_coding
description:
  Kef-type potassium/proton antiporter, CPA2 family; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.


ensembl_gene_id: SAMN05444409_3476
symbol: SIO44426.1
gene_biotype: protein_coding
description:
  RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: SAMN05444409_3479
symbol: SIO44460.1
gene_biotype: protein_coding
description:
  16S rRNA (cytosine967-C5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.


ensembl_gene_id: SAMN05444409_3484
symbol: SIO44516.1
gene_biotype: protein_coding
description:
  Apolipoprotein D and lipocalin family protein; Belongs to the calycin superfamily. Lipocalin family.


ensembl_gene_id: SAMN05444409_3499
symbol: valS
gene_biotype: protein_coding
description:
  valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.


ensembl_gene_id: SAMN05444409_3511
symbol: rpoC
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: SAMN05444409_3516
symbol: rplL
gene_biotype: protein_coding
description:
  LSU ribosomal protein L12P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.


ensembl_gene_id: SAMN05444409_3517
symbol: rplJ
gene_biotype: protein_coding
description:
  LSU ribosomal protein L10P; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.


ensembl_gene_id: SAMN05444409_3518
symbol: rplA
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.


ensembl_gene_id: SAMN05444409_3519
symbol: rplK
gene_biotype: protein_coding
description:
  LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.


ensembl_gene_id: SAMN05444409_3520
symbol: nusG
gene_biotype: protein_coding
description:
  Transcription antitermination protein nusG; Participates in transcription elongation, termination and antitermination.


ensembl_gene_id: SAMN05444409_3521
symbol: secE
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.


ensembl_gene_id: SAMN05444409_3523
symbol: tuf
gene_biotype: protein_coding
description:
  Translation elongation factor 1A (EF-1A/EF-Tu); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.


ensembl_gene_id: SAMN05444409_3532
symbol: SIO44996.1
gene_biotype: protein_coding
description:
  Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.


ensembl_gene_id: SAMN05444409_3535
symbol: SIO45033.1
gene_biotype: protein_coding
description:
  CDP-diacylglycerol---serine O-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: SAMN05444409_3552
symbol: SIO45224.1
gene_biotype: protein_coding
description:
  Sulfate adenylyltransferase subunit 1; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.


ensembl_gene_id: SAMN05444409_3560
symbol: glmS
gene_biotype: protein_coding
description:
  Glutamine--fructose-6-phosphate transaminase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.


ensembl_gene_id: SAMN05444409_3563
symbol: panC
gene_biotype: protein_coding
description:
  Pantothenate synthetase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.


ensembl_gene_id: SAMN05444409_3567
symbol: aroK
gene_biotype: protein_coding
description:
  Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.


ensembl_gene_id: SAMN05444409_3594
symbol: SIO45667.1
gene_biotype: protein_coding
description:
  Na+/H+-dicarboxylate symporter; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: SAMN05444409_3604
symbol: lipA
gene_biotype: protein_coding
description:
  Lipoic acid synthetase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.


ensembl_gene_id: SAMN05444409_3606
symbol: dapF
gene_biotype: protein_coding
description:
  Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.


ensembl_gene_id: SAMN05444409_3607
symbol: mltG
gene_biotype: protein_coding
description:
  UPF0755 protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation.


ensembl_gene_id: SAMN05444409_3616
symbol: fabV
gene_biotype: protein_coding
description:
  Enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+); Involved in the final reduction of the elongation cycle of fatty acid synthesis (FAS II). Catalyzes the reduction of a carbon- carbon double bond in an enoyl moiety that is covalently linked to an acyl carrier protein (ACP); Belongs to the TER reductase family.


ensembl_gene_id: SAMN05444409_3635
symbol: kup
gene_biotype: protein_coding
description:
  KUP system potassium uptake protein; Transport of potassium into the cell; Belongs to the HAK/KUP transporter (TC 2.A.72) family.


ensembl_gene_id: SAMN05444409_3639
symbol: SIO46128.1
gene_biotype: protein_coding
description:
  Acetylornithine/succinyldiaminopimelate/putresci ne aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: SAMN05444409_3643
symbol: hisG
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Long subfamily.


ensembl_gene_id: SAMN05444409_3644
symbol: hisD
gene_biotype: protein_coding
description:
  Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.


ensembl_gene_id: SAMN05444409_3645
symbol: hisC
gene_biotype: protein_coding
description:
  Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.


ensembl_gene_id: SAMN05444409_3646
symbol: hisB
gene_biotype: protein_coding
description:
  Imidazoleglycerol-phosphate dehydratase; In the C-terminal section; belongs to the imidazoleglycerol-phosphate dehydratase family.


ensembl_gene_id: SAMN05444409_3647
symbol: hisH
gene_biotype: protein_coding
description:
  Glutamine amidotransferase; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.


ensembl_gene_id: SAMN05444409_3648
symbol: hisA
gene_biotype: protein_coding
description:
  1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase.


ensembl_gene_id: SAMN05444409_3649
symbol: hisF
gene_biotype: protein_coding
description:
  Cyclase; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.


ensembl_gene_id: SAMN05444409_3652
symbol: pdxH
gene_biotype: protein_coding
description:
  Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP).


ensembl_gene_id: SAMN05444409_3663
symbol: truA
gene_biotype: protein_coding
description:
  tRNA pseudouridine38-40 synthase; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.


ensembl_gene_id: SAMN05444409_3693
symbol: ribB
gene_biotype: protein_coding
description:
  3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.


ensembl_gene_id: SAMN05444409_3700
symbol: azoR
gene_biotype: protein_coding
description:
  FMN-dependent NADH-azoreductase; Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family.


ensembl_gene_id: SAMN05444409_3707
symbol: tatA-2
gene_biotype: protein_coding
description:
  Sec-independent protein translocase protein TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.


ensembl_gene_id: SAMN05444409_3710
symbol: ribA
gene_biotype: protein_coding
description:
  GTP cyclohydrolase II; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family.


ensembl_gene_id: SAMN05444409_3711
symbol: SIO46844.1
gene_biotype: protein_coding
description:
  DNA-binding protein HU-beta; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.


ensembl_gene_id: SAMN05444409_3712
symbol: panD
gene_biotype: protein_coding
description:
  L-aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.


ensembl_gene_id: SAMN05444409_3715
symbol: uvrC
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.


ensembl_gene_id: SAMN05444409_3729
symbol: trmD
gene_biotype: protein_coding
description:
  tRNA (Guanine37-N(1)-) methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.


ensembl_gene_id: SAMN05444409_3734
symbol: rimM
gene_biotype: protein_coding
description:
  16S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.


ensembl_gene_id: SAMN05444409_3797
symbol: recG
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.


ensembl_gene_id: SAMN05444409_3806
symbol: dapA
gene_biotype: protein_coding
description:
  4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).


ensembl_gene_id: SAMN05444409_3827
symbol: SIO47724.1
gene_biotype: protein_coding
description:
  3-deoxy-D-manno-octulosonic-acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family.


ensembl_gene_id: SAMN05444409_3832
symbol: SIO47750.1
gene_biotype: protein_coding
description:
  tRNA1Val (adenine37-N6)-methyltransferase; Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC).


ensembl_gene_id: SAMN05444409_3839
symbol: SIO47793.1
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: SAMN05444409_3840
symbol: SIO47799.1
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase, biotin carboxylase subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: SAMN05444409_3841
symbol: SIO47805.1
gene_biotype: protein_coding
description:
  Ornithine--oxo-acid transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: SAMN05444409_3851
symbol: gltX
gene_biotype: protein_coding
description:
  glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.


ensembl_gene_id: SAMN05444409_3852
symbol: accA
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase carboxyl transferase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.


ensembl_gene_id: SAMN05444409_3855
symbol: rplM
gene_biotype: protein_coding
description:
  LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.


ensembl_gene_id: SAMN05444409_3859
symbol: pncB
gene_biotype: protein_coding
description:
  Nicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family.


ensembl_gene_id: SAMN05444409_3868
symbol: SIO47963.1
gene_biotype: protein_coding
description:
  ATP-binding protein involved in chromosome partitioning; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.


ensembl_gene_id: SAMN05444409_3871
symbol: SIO47983.1
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate dehydrogenase (NAD(P)+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: SAMN05444409_3886
symbol: ppk
gene_biotype: protein_coding
description:
  Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.


ensembl_gene_id: SAMN05444409_3894
symbol: SIO48122.1
gene_biotype: protein_coding
description:
  lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: SAMN05444409_3901
symbol: aspS
gene_biotype: protein_coding
description:
  aspartyl-tRNA synthetase; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor end of tRNA(Asp). Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.


ensembl_gene_id: SAMN05444409_3905
symbol: aroC
gene_biotype: protein_coding
description:
  Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.


# pathwayInfo

id: CL:1000
description: Citrate cycle (TCA cycle), and Proline catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1000_Citrate_cycle_(TCA_cycle),_and_Proline_catabolic_process


id: CL:1001
description: Mixed, incl. Tricarboxylic acid cycle, and Acetate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1001_Mixed,_incl._Tricarboxylic_acid_cycle,_and_Acetate_metabolic_process


id: CL:1004
description: Malate dehydrogenase activity, and Lyase
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1004_Malate_dehydrogenase_activity,_and_Lyase


id: CL:102
description: Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:102_Ribosome,_and_Translation_regulator_activity


id: CL:1025
description: 4Fe-4S dicluster domain, and FAD-dependent oxidoreductase SdhA/FrdA/AprA
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1025_4Fe-4S_dicluster_domain,_and_FAD-dependent_oxidoreductase_SdhA/FrdA/AprA


id: CL:1044
description: Pentose phosphate pathway, and Glycolysis
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1044_Pentose_phosphate_pathway,_and_Glycolysis


id: CL:1045
description: Pentose phosphate pathway, and Glycolysis
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1045_Pentose_phosphate_pathway,_and_Glycolysis


id: CL:1046
description: Glycolysis, and Pentose phosphate pathway
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1046_Glycolysis,_and_Pentose_phosphate_pathway


id: CL:1048
description: Glycolysis, and Transaldolase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1048_Glycolysis,_and_Transaldolase_activity


id: CL:105
description: Ribosome, and Translational elongation
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:105_Ribosome,_and_Translational_elongation


id: CL:1102
description: Alcohol dehydrogenase-like, C-terminal, and Lactone biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1102_Alcohol_dehydrogenase-like,_C-terminal,_and_Lactone_biosynthetic_process


id: CL:1118
description: Valine, leucine and isoleucine degradation, and Phenylalanine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1118_Valine,_leucine_and_isoleucine_degradation,_and_Phenylalanine_metabolism


id: CL:1119
description: Phenylalanine metabolism, and Fatty acid degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1119_Phenylalanine_metabolism,_and_Fatty_acid_degradation


id: CL:112
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:112_Structural_constituent_of_ribosome


id: CL:1121
description: Fatty acid degradation, and Synthesis and degradation of ketone bodies
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1121_Fatty_acid_degradation,_and_Synthesis_and_degradation_of_ketone_bodies


id: CL:1122
description: Lipid oxidation, and Synthesis and degradation of ketone bodies
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1122_Lipid_oxidation,_and_Synthesis_and_degradation_of_ketone_bodies


id: CL:1125
description: 3-hydroxyacyl-CoA dehydrogenase, C-terminal, and Thiolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1125_3-hydroxyacyl-CoA_dehydrogenase,_C-terminal,_and_Thiolase


id: CL:1147
description: Acyl-CoA dehydrogenase, conserved site, and Electron transfer flavoprotein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1147_Acyl-CoA_dehydrogenase,_conserved_site,_and_Electron_transfer_flavoprotein_domain


id: CL:115
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:115_Structural_constituent_of_ribosome


id: CL:117
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:117_Structural_constituent_of_ribosome


id: CL:1170
description: Xenobiotic metabolic process, and MIP18 family-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1170_Xenobiotic_metabolic_process,_and_MIP18_family-like


id: CL:118
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:118_Structural_constituent_of_ribosome


id: CL:1187
description: Methylmalonyl-CoA mutase, and CobW/HypB/UreG, nucleotide-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1187_Methylmalonyl-CoA_mutase,_and_CobW/HypB/UreG,_nucleotide-binding_domain


id: CL:119
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:119_Structural_constituent_of_ribosome


id: CL:1197
description: Cellular amino acid biosynthetic process, and Cysteine and methionine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1197_Cellular_amino_acid_biosynthetic_process,_and_Cysteine_and_methionine_metabolism


id: CL:1198
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1198_Biosynthesis_of_amino_acids,_and_D-isomer_specific_2-hydroxyacid_dehydrogenase,_NAD-binding_domain_conserved_site_1

description:
  Biosynthesis of amino acids, and D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1


id: CL:1199
description: Cysteine and methionine metabolism, and Branched-chain amino acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1199_Cysteine_and_methionine_metabolism,_and_Branched-chain_amino_acid_metabolic_process


id: CL:120
description: rRNA-binding, and Elongation factor Tu domain 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:120_rRNA-binding,_and_Elongation_factor_Tu_domain_2


id: CL:1200
description: Cysteine and methionine metabolism, and Glycine, serine and threonine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1200_Cysteine_and_methionine_metabolism,_and_Glycine,_serine_and_threonine_metabolism


id: CL:1201
description: Glycine, serine and threonine metabolism, and Methionine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1201_Glycine,_serine_and_threonine_metabolism,_and_Methionine_metabolic_process


id: CL:1203
description: Sulfur amino acid metabolic process, and Threonine biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1203_Sulfur_amino_acid_metabolic_process,_and_Threonine_biosynthetic_process


id: CL:1204
description: Threonine biosynthetic process, and Methionine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1204_Threonine_biosynthetic_process,_and_Methionine_metabolic_process


id: CL:1205
description: Methionine metabolic process, and Methionine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1205_Methionine_metabolic_process,_and_Methionine_biosynthesis


id: CL:1227
description: Cysteine biosynthetic process, and Carbon-sulfur lyase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1227_Cysteine_biosynthetic_process,_and_Carbon-sulfur_lyase_activity


id: CL:1239
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1239_Mixed,_incl._Isoleucine_biosynthesis,_and_Aminotransferase,_class-II,_pyridoxal-phosphate_binding_site

description:
  Mixed, incl. Isoleucine biosynthesis, and Aminotransferase, class-II, pyridoxal-phosphate binding site


id: CL:1249
description: Novobiocin biosynthesis, and L-phenylalanine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1249_Novobiocin_biosynthesis,_and_L-phenylalanine_metabolic_process


id: CL:1267
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1267_Valine,_leucine_and_isoleucine_biosynthesis,_and_D-isomer_specific_2-hydroxyacid_dehydrogenase,_catalytic_domain

description:
  Valine, leucine and isoleucine biosynthesis, and D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain


id: CL:1268
description: Valine, leucine and isoleucine biosynthesis, and TPP-binding enzyme, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1268_Valine,_leucine_and_isoleucine_biosynthesis,_and_TPP-binding_enzyme,_conserved_site


id: CL:1270
description: Branched-chain amino acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1270_Branched-chain_amino_acid_metabolic_process


id: CL:1293
description: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain, and L-serine biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1293_D-isomer_specific_2-hydroxyacid_dehydrogenase,_catalytic_domain,_and_L-serine_biosynthetic_process


id: CL:1304
description: Phenylalanine, tyrosine and tryptophan biosynthesis, and Histidine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1304_Phenylalanine,_tyrosine_and_tryptophan_biosynthesis,_and_Histidine_biosynthesis


id: CL:1305
description: Aromatic amino acid biosynthesis, and Anthranilate synthase component I-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1305_Aromatic_amino_acid_biosynthesis,_and_Anthranilate_synthase_component_I-like


id: CL:1353
description: Glutamine family amino acid biosynthetic process, and Lysine biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1353_Glutamine_family_amino_acid_biosynthetic_process,_and_Lysine_biosynthetic_process


id: CL:1355
description: Arginine biosynthetic process, and Bacterial exopeptidase dimerisation domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1355_Arginine_biosynthetic_process,_and_Bacterial_exopeptidase_dimerisation_domain


id: CL:1400
description: Mixed, incl. NADH dehydrogenase activity, and Alpha/Beta hydrolase fold
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1400_Mixed,_incl._NADH_dehydrogenase_activity,_and_Alpha/Beta_hydrolase_fold


id: CL:1401
description: Mixed, incl. NADH dehydrogenase activity, and Nitrogen metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1401_Mixed,_incl._NADH_dehydrogenase_activity,_and_Nitrogen_metabolism


id: CL:1402
description: Mixed, incl. NADH dehydrogenase activity, and Oxidative phosphorylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1402_Mixed,_incl._NADH_dehydrogenase_activity,_and_Oxidative_phosphorylation


id: CL:1403
description: Mixed, incl. NADH dehydrogenase activity, and Oxidative phosphorylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1403_Mixed,_incl._NADH_dehydrogenase_activity,_and_Oxidative_phosphorylation


id: CL:1405
description: Mixed, incl. NADH dehydrogenase (quinone) activity, and NAD(P)H-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1405_Mixed,_incl._NADH_dehydrogenase_(quinone)_activity,_and_NAD(P)H-binding


id: CL:1409
description: NADH dehydrogenase (quinone) activity, and NAD(P)H-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1409_NADH_dehydrogenase_(quinone)_activity,_and_NAD(P)H-binding


id: CL:1413
description: NADH dehydrogenase (quinone) activity, and NAD(P)H-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1413_NADH_dehydrogenase_(quinone)_activity,_and_NAD(P)H-binding


id: CL:1415
description: NADH dehydrogenase (quinone) activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1415_NADH_dehydrogenase_(quinone)_activity


id: CL:1416
description: Quinone, and NADH dehydrogenase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1416_Quinone,_and_NADH_dehydrogenase_complex


id: CL:1430
description: ATP synthesis coupled electron transport, and NADH dehydrogenase (ubiquinone) activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1430_ATP_synthesis_coupled_electron_transport,_and_NADH_dehydrogenase_(ubiquinone)_activity


id: CL:145
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:145_Structural_constituent_of_ribosome


id: CL:1477
description: Mixed, incl. AMP-binding enzyme C-terminal domain, and Phosphopantetheine attachment site
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1477_Mixed,_incl._AMP-binding_enzyme_C-terminal_domain,_and_Phosphopantetheine_attachment_site


id: CL:1493
description: Sulfate transport, and Carbonic anhydrase
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1493_Sulfate_transport,_and_Carbonic_anhydrase


id: CL:1505
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1505_Mixed,_incl._Regulation_of_DNA_recombination,_and_Calcineurin-like_phosphoesterase_domain,_lpxH-type

description:
  Mixed, incl. Regulation of DNA recombination, and Calcineurin-like phosphoesterase domain, lpxH-type


id: CL:1521
description: Mixed, incl. Response to oxidative stress, and Thioredoxin domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1521_Mixed,_incl._Response_to_oxidative_stress,_and_Thioredoxin_domain


id: CL:1522
description: Response to oxidative stress, and Thioredoxin domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1522_Response_to_oxidative_stress,_and_Thioredoxin_domain


id: CL:1523
description: Response to oxidative stress, and Thioredoxin domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1523_Response_to_oxidative_stress,_and_Thioredoxin_domain


id: CL:1524
description: Response to oxidative stress, and AhpC/TSA family
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1524_Response_to_oxidative_stress,_and_AhpC/TSA_family


id: CL:1525
description: Peroxidase activity, and DJ-1/PfpI
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1525_Peroxidase_activity,_and_DJ-1/PfpI


id: CL:1530
description: Hydrogen peroxide, and Peroxiredoxin, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1530_Hydrogen_peroxide,_and_Peroxiredoxin,_C-terminal


id: CL:1554
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1554_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_disulfide_as_acceptor,_and_Thioredoxin,_conserved_site

description:
  Oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor, and Thioredoxin, conserved site


id: CL:1565
description: Mixed, incl. Pyridine nucleotide-disulphide oxidoreductase, and Thioredoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1565_Mixed,_incl._Pyridine_nucleotide-disulphide_oxidoreductase,_and_Thioredoxin


id: CL:1578
description: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant, and TonB, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1578_Alkyl_hydroperoxide_reductase_subunit_C/_Thiol_specific_antioxidant,_and_TonB,_C-terminal


id: CL:1588
description: Mixed, incl. Penicillinase repressor, and Peptidase M56
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1588_Mixed,_incl._Penicillinase_repressor,_and_Peptidase_M56


id: CL:1589
description: P-type ATPase, subfamily IB, and Heavy metal-associated domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1589_P-type_ATPase,_subfamily_IB,_and_Heavy_metal-associated_domain_superfamily


id: CL:1601
description: Penicillinase repressor, and Peptidase M56
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1601_Penicillinase_repressor,_and_Peptidase_M56


id: CL:1616
description: Mixed, incl. Outer membrane protein/outer membrane enzyme PagP, beta-barrel, and Thioredoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1616_Mixed,_incl._Outer_membrane_protein/outer_membrane_enzyme_PagP,_beta-barrel,_and_Thioredoxin


id: CL:1618
description: Mixed, incl. Outer membrane protein beta-barrel domain, and Thioredoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1618_Mixed,_incl._Outer_membrane_protein_beta-barrel_domain,_and_Thioredoxin


id: CL:164
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:164_Structural_constituent_of_ribosome


id: CL:1642
description: Mixed, incl. Fatty acid biosynthesis, and Short-chain dehydrogenase/reductase SDR
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1642_Mixed,_incl._Fatty_acid_biosynthesis,_and_Short-chain_dehydrogenase/reductase_SDR


id: CL:1643
description: Mixed, incl. Fatty acid biosynthesis, and Short-chain dehydrogenase/reductase SDR
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1643_Mixed,_incl._Fatty_acid_biosynthesis,_and_Short-chain_dehydrogenase/reductase_SDR


id: CL:1645
description: Mixed, incl. Fatty acid biosynthesis, and Phosphopantetheine attachment site
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1645_Mixed,_incl._Fatty_acid_biosynthesis,_and_Phosphopantetheine_attachment_site


id: CL:1646
description: Mixed, incl. Fatty acid synthase activity, and Phosphopantetheine attachment site
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1646_Mixed,_incl._Fatty_acid_synthase_activity,_and_Phosphopantetheine_attachment_site


id: CL:1648
description: Mixed, incl. Fatty acid synthase activity, and Phosphopantetheine attachment site
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1648_Mixed,_incl._Fatty_acid_synthase_activity,_and_Phosphopantetheine_attachment_site


id: CL:1650
description: Mixed, incl. Fatty acid synthase activity, and Phosphopantetheine attachment site
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1650_Mixed,_incl._Fatty_acid_synthase_activity,_and_Phosphopantetheine_attachment_site


id: CL:1651
description: Fatty acid synthase activity, and Phosphopantetheine attachment site
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1651_Fatty_acid_synthase_activity,_and_Phosphopantetheine_attachment_site


id: CL:1653
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1653_3-hydroxyacyl-[acyl-carrier-protein]_dehydratase_activity,_and_3-Oxoacyl-[acyl-carrier-protein_(ACP)]_synthase_III

description:
  3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity, and 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III


id: CL:1665
description: Beta-ketoacyl synthase, and Beta-ketoacyl-acyl-carrier-protein synthase III activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1665_Beta-ketoacyl_synthase,_and_Beta-ketoacyl-acyl-carrier-protein_synthase_III_activity


id: CL:167
description: Mixed, incl. Large ribosomal subunit, and L28p-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:167_Mixed,_incl._Large_ribosomal_subunit,_and_L28p-like


id: CL:1675
description: Mixed, incl. ABC-2 transporter, and Flavoprotein-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1675_Mixed,_incl._ABC-2_transporter,_and_Flavoprotein-like_superfamily


id: CL:1692
description: Mixed, incl. Lipoprotein localisation LolA/LolB/LppX, and NodB homology domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1692_Mixed,_incl._Lipoprotein_localisation_LolA/LolB/LppX,_and_NodB_homology_domain


id: CL:1711
description: Fatty acid biosynthesis, and 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1711_Fatty_acid_biosynthesis,_and_3-Oxoacyl-[acyl-carrier-protein_(ACP)]_synthase_III


id: CL:1713
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1713_3-oxoacyl-[acyl-carrier-protein]_synthase_2,_and_3-Oxoacyl-[acyl-carrier-protein_(ACP)]_synthase_III

description:
  3-oxoacyl-[acyl-carrier-protein] synthase 2, and 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III


id: CL:1728
description: acetyl-CoA carboxylase complex, and Biotin
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1728_acetyl-CoA_carboxylase_complex,_and_Biotin


id: CL:1745
description: Mixed, incl. KR domain, and Homeobox-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1745_Mixed,_incl._KR_domain,_and_Homeobox-like_domain_superfamily


id: CL:1746
description: Short-chain dehydrogenase/reductase SDR, and Homeobox-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1746_Short-chain_dehydrogenase/reductase_SDR,_and_Homeobox-like_domain_superfamily


id: CL:1747
description: Mixed, incl. Short-chain dehydrogenase/reductase SDR, and HxlR-like helix-turn-helix
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1747_Mixed,_incl._Short-chain_dehydrogenase/reductase_SDR,_and_HxlR-like_helix-turn-helix


id: CL:1748
description: Mixed, incl. Short-chain dehydrogenase/reductase SDR, and Transcription regulator HTH-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1748_Mixed,_incl._Short-chain_dehydrogenase/reductase_SDR,_and_Transcription_regulator_HTH-like


id: CL:1751
description: KR domain, and Helix_turn_helix, arabinose operon control protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1751_KR_domain,_and_Helix_turn_helix,_arabinose_operon_control_protein


id: CL:1764
description: Mixed, incl. Transcription regulator HTH-like, and Antibiotic biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1764_Mixed,_incl._Transcription_regulator_HTH-like,_and_Antibiotic_biosynthetic_process


id: CL:1773
description: Mixed, incl. NmrA-like family, and Short-chain dehydrogenase/reductase, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1773_Mixed,_incl._NmrA-like_family,_and_Short-chain_dehydrogenase/reductase,_conserved_site


id: CL:1784
description: Mixed, incl. Phenylacetic acid degradation-related domain, and KR domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1784_Mixed,_incl._Phenylacetic_acid_degradation-related_domain,_and_KR_domain


id: CL:1797
description: Mixed, incl. Steroid degradation, and KR domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1797_Mixed,_incl._Steroid_degradation,_and_KR_domain


id: CL:1808
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1808_Mostly_uncharacterized,_incl._CinA,_C-terminal,_and_2-dehydro-3-deoxy-D-gluconate_5-dehydrogenase_activity

description:
  Mostly uncharacterized, incl. CinA, C-terminal, and 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase activity


id: CL:1810
description: Mixed, incl. CinA, C-terminal, and Calcium
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1810_Mixed,_incl._CinA,_C-terminal,_and_Calcium


id: CL:1813
description: Mixed, incl. Calcium, and CinA, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1813_Mixed,_incl._Calcium,_and_CinA,_C-terminal


id: CL:1838
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1838_Mixed,_incl._Protein_of_unknown_function_DUF2490,_and_Transcriptional_regulator_MarR-type,_conserved_site

description:
  Mixed, incl. Protein of unknown function DUF2490, and Transcriptional regulator MarR-type, conserved site


id: CL:1851
description: Mostly uncharacterized, incl. O-methyltransferase, and Bacterial SH3 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1851_Mostly_uncharacterized,_incl._O-methyltransferase,_and_Bacterial_SH3_domain


id: CL:1853
description: Mixed, incl. Cytochrome complex assembly, and Alpha/beta hydrolase fold
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1853_Mixed,_incl._Cytochrome_complex_assembly,_and_Alpha/beta_hydrolase_fold


id: CL:1869
description: Mixed, incl. UvrB, interaction domain, and Carboxylic ester hydrolase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1869_Mixed,_incl._UvrB,_interaction_domain,_and_Carboxylic_ester_hydrolase_activity


id: CL:1880
description: Mixed, incl. Glutathione metabolism, and Phosphoprotein phosphatase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1880_Mixed,_incl._Glutathione_metabolism,_and_Phosphoprotein_phosphatase_activity


id: CL:1881
description: Mixed, incl. Glutathione metabolism, and Esterase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1881_Mixed,_incl._Glutathione_metabolism,_and_Esterase-like


id: CL:1883
description: Glutathione metabolism, and Esterase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1883_Glutathione_metabolism,_and_Esterase-like


id: CL:1886
description: Glutamate-cysteine ligase activity, and GMP synthase (glutamine-hydrolyzing) activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1886_Glutamate-cysteine_ligase_activity,_and_GMP_synthase_(glutamine-hydrolyzing)_activity


id: CL:189
description: Ribosomal protein L2, domain 2, and Ribosomal subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:189_Ribosomal_protein_L2,_domain_2,_and_Ribosomal_subunit


id: CL:1911
description: Mixed, incl. UVR domain, and Peptidase M20
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1911_Mixed,_incl._UVR_domain,_and_Peptidase_M20


id: CL:1923
description: Mixed, incl. Phosphoprotein phosphatase activity, and Putative glucoamylase
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1923_Mixed,_incl._Phosphoprotein_phosphatase_activity,_and_Putative_glucoamylase


id: CL:1925
description: Mixed, incl. Phosphoprotein phosphatase activity, and AI-2E family transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1925_Mixed,_incl._Phosphoprotein_phosphatase_activity,_and_AI-2E_family_transporter


id: CL:1943
description: Mixed, incl. Putative glucoamylase, and Dihydrouridine synthase (Dus)
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1943_Mixed,_incl._Putative_glucoamylase,_and_Dihydrouridine_synthase_(Dus)


id: CL:1953
description: Mixed, incl. Pigment biosynthetic process, and Isoprenoid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1953_Mixed,_incl._Pigment_biosynthetic_process,_and_Isoprenoid_metabolic_process


id: CL:1954
description: Mixed, incl. Pigment biosynthetic process, and Isoprenoid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1954_Mixed,_incl._Pigment_biosynthetic_process,_and_Isoprenoid_metabolic_process


id: CL:1955
description: Mixed, incl. Porphyrin-containing compound biosynthetic process, and Sulfate assimilation
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1955_Mixed,_incl._Porphyrin-containing_compound_biosynthetic_process,_and_Sulfate_assimilation


id: CL:1957
description: Mixed, incl. Sulfate assimilation, and Methionine biosynthesis protein MetW
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1957_Mixed,_incl._Sulfate_assimilation,_and_Methionine_biosynthesis_protein_MetW


id: CL:1958
description: Mixed, incl. Methionine biosynthesis protein MetW, and Methyltransferase type 11
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1958_Mixed,_incl._Methionine_biosynthesis_protein_MetW,_and_Methyltransferase_type_11


id: CL:1972
description: Sulfate assimilation, and DHH family
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1972_Sulfate_assimilation,_and_DHH_family


id: CL:1989
description: Heme biosynthetic process, and Band 7 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1989_Heme_biosynthetic_process,_and_Band_7_domain


id: CL:1991
description: Protoporphyrinogen IX metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:1991_Protoporphyrinogen_IX_metabolic_process


id: CL:2014
description: Mixed, incl. Isoprenoid metabolic process, and Fatty acid hydroxylase
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2014_Mixed,_incl._Isoprenoid_metabolic_process,_and_Fatty_acid_hydroxylase


id: CL:2015
description: Mixed, incl. Isoprenoid metabolic process, and Fatty acid hydroxylase
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2015_Mixed,_incl._Isoprenoid_metabolic_process,_and_Fatty_acid_hydroxylase


id: CL:2016
description: Isoprenoid metabolic process, and Carotenoid biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2016_Isoprenoid_metabolic_process,_and_Carotenoid_biosynthesis


id: CL:2032
description: Isoprenoid biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2032_Isoprenoid_biosynthetic_process


id: CL:2045
description: Mixed, incl. Fatty acid hydroxylase, and YqgF/RNase H-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2045_Mixed,_incl._Fatty_acid_hydroxylase,_and_YqgF/RNase_H-like_domain


id: CL:2058
description: Mixed, incl. TatD related DNase, and SGNH hydrolase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2058_Mixed,_incl._TatD_related_DNase,_and_SGNH_hydrolase_superfamily


id: CL:206
description: Mixed, incl. Small ribosomal subunit, and Ribosomal protein S13-like, H2TH
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:206_Mixed,_incl._Small_ribosomal_subunit,_and_Ribosomal_protein_S13-like,_H2TH


id: CL:2068
description: Mixed, incl. O-methyltransferase, and GIY-YIG endonuclease
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2068_Mixed,_incl._O-methyltransferase,_and_GIY-YIG_endonuclease


id: CL:207
description: Small ribosomal subunit, and Ribosomal protein S13-like, H2TH
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:207_Small_ribosomal_subunit,_and_Ribosomal_protein_S13-like,_H2TH


id: CL:2086
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2086_Mixed,_incl._Phosphorelay_signal_transduction_system,_and_Cyclic_nucleotide-binding_domain_superfamily

description:
  Mixed, incl. Phosphorelay signal transduction system, and Cyclic nucleotide-binding domain superfamily


id: CL:2087
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2087_Mixed,_incl._Phosphorelay_signal_transduction_system,_and_Cyclic_nucleotide-binding_domain_superfamily

description:
  Mixed, incl. Phosphorelay signal transduction system, and Cyclic nucleotide-binding domain superfamily


id: CL:2089
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2089_Mixed,_incl._Phosphorelay_signal_transduction_system,_and_Cyclic_nucleotide-binding_domain_superfamily

description:
  Mixed, incl. Phosphorelay signal transduction system, and Cyclic nucleotide-binding domain superfamily


id: CL:2090
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2090_Mixed,_incl._Phosphorelay_signal_transduction_system,_and_Cyclic_nucleotide-binding_domain_superfamily

description:
[cell repeats an earlier one in this file: 102 characters]


id: CL:2091
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2091_Mixed,_incl._Phosphorelay_signal_transduction_system,_and_Cyclic_nucleotide-binding_domain_superfamily

description:
[cell repeats an earlier one in this file: 102 characters]


id: CL:2092
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2092_Mixed,_incl._Phosphorelay_signal_transduction_system,_and_Cyclic_nucleotide-binding_domain_superfamily

description:
[cell repeats an earlier one in this file: 102 characters]


id: CL:2093
description: Phosphorelay signal transduction system, and Cyclic nucleotide-binding domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2093_Phosphorelay_signal_transduction_system,_and_Cyclic_nucleotide-binding_domain_superfamily


id: CL:2095
description: Phosphorelay signal transduction system, and Helix_turn_helix, Lux Regulon
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2095_Phosphorelay_signal_transduction_system,_and_Helix_turn_helix,_Lux_Regulon


id: CL:2096
description: Phosphorelay signal transduction system, and Helix_turn_helix, Lux Regulon
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2096_Phosphorelay_signal_transduction_system,_and_Helix_turn_helix,_Lux_Regulon


id: CL:2098
description: His Kinase A (phosphoacceptor) domain, and CheY-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2098_His_Kinase_A_(phosphoacceptor)_domain,_and_CheY-like_superfamily


id: CL:2100
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2100_Signal_transduction_histidine_kinase,_dimerisation/phosphoacceptor_domain_superfamily,_and_OmpR/PhoB-type_DNA-binding_domain

description:
  Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily, and OmpR/PhoB-type DNA-binding domain


id: CL:2102
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2102_Signal_transduction_histidine_kinase,_dimerisation/phosphoacceptor_domain_superfamily,_and_OmpR/PhoB-type_DNA-binding_domain

description:
  Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily, and OmpR/PhoB-type DNA-binding domain


id: CL:2105
description: Mixed, incl. Cell surface, and Bacterial chemotaxis
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2105_Mixed,_incl._Cell_surface,_and_Bacterial_chemotaxis


id: CL:2107
description: Cell surface, and PAS-associated, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2107_Cell_surface,_and_PAS-associated,_C-terminal


id: CL:2140
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2140_OmpR/PhoB-type_DNA-binding_domain,_and_Signal_transduction_histidine_kinase-related_protein,_C-terminal

description:
  OmpR/PhoB-type DNA-binding domain, and Signal transduction histidine kinase-related protein, C-terminal


id: CL:2154
description: Two-component regulatory system, and PAS fold
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2154_Two-component_regulatory_system,_and_PAS_fold


id: CL:216
description: Mixed, incl. Protein transport by the Sec complex, and Small ribosomal subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:216_Mixed,_incl._Protein_transport_by_the_Sec_complex,_and_Small_ribosomal_subunit


id: CL:2170
description: Sigma-54 interaction domain, ATP-binding site 2, and Positive regulation of RNA metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2170_Sigma-54_interaction_domain,_ATP-binding_site_2,_and_Positive_regulation_of_RNA_metabolic_process


id: CL:2188
description: Helix_turn_helix, Lux Regulon, and Histidine kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2188_Helix_turn_helix,_Lux_Regulon,_and_Histidine_kinase


id: CL:2211
description: P-type ion transporter activity, and PAS fold
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2211_P-type_ion_transporter_activity,_and_PAS_fold


id: CL:2231
description: Cyclic nucleotide-binding domain superfamily, and Tetratricopeptide repeats
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2231_Cyclic_nucleotide-binding_domain_superfamily,_and_Tetratricopeptide_repeats


id: CL:2232
description: Cyclic nucleotide-binding domain superfamily, and Tetratricopeptide repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2232_Cyclic_nucleotide-binding_domain_superfamily,_and_Tetratricopeptide_repeat


id: CL:2234
description: Cyclic nucleotide-binding domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2234_Cyclic_nucleotide-binding_domain_superfamily


id: CL:2237
description: Mixed, incl. Tetratricopeptide repeat, and Cyclic nucleotide-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2237_Mixed,_incl._Tetratricopeptide_repeat,_and_Cyclic_nucleotide-binding_domain


id: CL:2264
description: Crp-type HTH domain, and Tetratricopeptide repeats
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2264_Crp-type_HTH_domain,_and_Tetratricopeptide_repeats


id: CL:2280
description: Mixed, incl. Protein dimerization activity, and TerB-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2280_Mixed,_incl._Protein_dimerization_activity,_and_TerB-like


id: CL:2281
description: Mixed, incl. Protein dimerization activity, and JmjC domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2281_Mixed,_incl._Protein_dimerization_activity,_and_JmjC_domain


id: CL:2296
description: Mixed, incl. TerB-like, and Protein of unknown function DUF6804
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2296_Mixed,_incl._TerB-like,_and_Protein_of_unknown_function_DUF6804


id: CL:2307
description: Mostly uncharacterized, incl. Cell morphogenesis, and SbsA, Ig-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2307_Mostly_uncharacterized,_incl._Cell_morphogenesis,_and_SbsA,_Ig-like_domain


id: CL:2309
description: Mixed, incl. Helix_turn_helix, Lux Regulon, and Protein dimerization activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2309_Mixed,_incl._Helix_turn_helix,_Lux_Regulon,_and_Protein_dimerization_activity


id: CL:2338
description: Mixed, incl. Phosphorelay signal transduction system
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2338_Mixed,_incl._Phosphorelay_signal_transduction_system


id: CL:2358
description: Mixed, incl. Recombinational repair, and Bacterial ceramide synthase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2358_Mixed,_incl._Recombinational_repair,_and_Bacterial_ceramide_synthase-like


id: CL:2376
description: Mixed, incl. LytTr DNA-binding domain, and Histidine kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2376_Mixed,_incl._LytTr_DNA-binding_domain,_and_Histidine_kinase


id: CL:2377
description: Mixed, incl. LytTr DNA-binding domain, and Histidine kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2377_Mixed,_incl._LytTr_DNA-binding_domain,_and_Histidine_kinase


id: CL:2378
description: LytTr DNA-binding domain, and Histidine kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2378_LytTr_DNA-binding_domain,_and_Histidine_kinase


id: CL:2379
description: LytTr DNA-binding domain, and Histidine kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2379_LytTr_DNA-binding_domain,_and_Histidine_kinase


id: CL:2381
description: LytTr DNA-binding domain, and Histidine kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2381_LytTr_DNA-binding_domain,_and_Histidine_kinase


id: CL:2383
description: Transcriptional regulatory protein LytR-like, and Histidine kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2383_Transcriptional_regulatory_protein_LytR-like,_and_Histidine_kinase


id: CL:2395
description: LytTr DNA-binding domain, and Histidine kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2395_LytTr_DNA-binding_domain,_and_Histidine_kinase


id: CL:2427
description: Mixed, incl. Type II CAAX prenyl endopeptidase Rce1-like, and Histidine kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2427_Mixed,_incl._Type_II_CAAX_prenyl_endopeptidase_Rce1-like,_and_Histidine_kinase


id: CL:2437
description: Mixed, incl. tRNA threonylcarbamoyladenosine modification, and Taurine and hypotaurine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2437_Mixed,_incl._tRNA_threonylcarbamoyladenosine_modification,_and_Taurine_and_hypotaurine_metabolism


id: CL:2438
description: Mixed, incl. Taurine and hypotaurine metabolism, and Phosphotransferase system (PTS)
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2438_Mixed,_incl._Taurine_and_hypotaurine_metabolism,_and_Phosphotransferase_system_(PTS)


id: CL:2447
description: tRNA threonylcarbamoyladenosine modification, and Domain of unknown function (DUF4440)
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2447_tRNA_threonylcarbamoyladenosine_modification,_and_Domain_of_unknown_function_(DUF4440)


id: CL:2456
description: Mixed, incl. Protein serine/threonine kinase activity, and Bacterial chemotaxis
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2456_Mixed,_incl._Protein_serine/threonine_kinase_activity,_and_Bacterial_chemotaxis


id: CL:2484
description: Mixed, incl. Establishment of localization, and GLPGLI family protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2484_Mixed,_incl._Establishment_of_localization,_and_GLPGLI_family_protein


id: CL:2485
description: Mixed, incl. Establishment of localization, and GLPGLI family protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2485_Mixed,_incl._Establishment_of_localization,_and_GLPGLI_family_protein


id: CL:2486
description: Mixed, incl. Macromolecule localization, and Cell envelope
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2486_Mixed,_incl._Macromolecule_localization,_and_Cell_envelope


id: CL:2488
description: Mixed, incl. Macromolecule localization, and Cell envelope
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2488_Mixed,_incl._Macromolecule_localization,_and_Cell_envelope


id: CL:2489
description: Mixed, incl. Envelope, and GLPGLI family protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2489_Mixed,_incl._Envelope,_and_GLPGLI_family_protein


id: CL:2490
description: Mixed, incl. Cell envelope, and GLPGLI family protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2490_Mixed,_incl._Cell_envelope,_and_GLPGLI_family_protein


id: CL:2491
description: Mixed, incl. Cell envelope, and Protein transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2491_Mixed,_incl._Cell_envelope,_and_Protein_transport


id: CL:2492
description: Mixed, incl. Cell envelope, and Glycerophospholipid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2492_Mixed,_incl._Cell_envelope,_and_Glycerophospholipid_metabolism


id: CL:2493
description: Mixed, incl. Cell envelope, and Glycerophospholipid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2493_Mixed,_incl._Cell_envelope,_and_Glycerophospholipid_metabolism


id: CL:2494
description: Mixed, incl. Cell envelope, and PD-(D/E)XK endonuclease-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2494_Mixed,_incl._Cell_envelope,_and_PD-(D/E)XK_endonuclease-like_domain_superfamily


id: CL:2497
description: Mixed, incl. Porin activity, and Macromolecule localization
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2497_Mixed,_incl._Porin_activity,_and_Macromolecule_localization


id: CL:2499
description: Mixed, incl. Cell envelope, and PD-(D/E)XK endonuclease-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2499_Mixed,_incl._Cell_envelope,_and_PD-(D/E)XK_endonuclease-like_domain_superfamily


id: CL:2501
description: Mixed, incl. Cell envelope, and PD-(D/E)XK endonuclease-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2501_Mixed,_incl._Cell_envelope,_and_PD-(D/E)XK_endonuclease-like_domain_superfamily


id: CL:2503
description: Mostly uncharacterized, incl. Porin activity, and Secretion
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2503_Mostly_uncharacterized,_incl._Porin_activity,_and_Secretion


id: CL:2505
description: Mixed, incl. Porin activity, and META domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2505_Mixed,_incl._Porin_activity,_and_META_domain


id: CL:2507
description: Mixed, incl. Porin activity, and LysM domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2507_Mixed,_incl._Porin_activity,_and_LysM_domain


id: CL:2509
description: Mixed, incl. LysM domain, and Protein of unknown function DUF6263
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2509_Mixed,_incl._LysM_domain,_and_Protein_of_unknown_function_DUF6263


id: CL:2530
description: Mixed, incl. Domain of unknown function (DUF3817), and RuvA domain 2-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2530_Mixed,_incl._Domain_of_unknown_function_(DUF3817),_and_RuvA_domain_2-like


id: CL:2607
description: Mixed, incl. Phosphate acyltransferases, and Isoprenoid biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2607_Mixed,_incl._Phosphate_acyltransferases,_and_Isoprenoid_biosynthetic_process


id: CL:2611
description: Mixed, incl. Isoprenoid biosynthetic process, and Amino acid transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2611_Mixed,_incl._Isoprenoid_biosynthetic_process,_and_Amino_acid_transmembrane_transporter_activity


id: CL:2613
description: Isoprenoid biosynthetic process, and Heme metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2613_Isoprenoid_biosynthetic_process,_and_Heme_metabolic_process


id: CL:2623
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2623_Mixed,_incl._Amino_acid_transmembrane_transporter_activity,_and_Aminotransferase-like,_PLP-dependent_enzymes

description:
  Mixed, incl. Amino acid transmembrane transporter activity, and Aminotransferase-like, PLP-dependent enzymes


id: CL:2638
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2638_Mixed,_incl._TonB-dependent_receptor,_conserved_site,_and_Deoxyribonucleoside_monophosphate_catabolic_process

description:
  Mixed, incl. TonB-dependent receptor, conserved site, and Deoxyribonucleoside monophosphate catabolic process


id: CL:2647
description: Mixed, incl. Biopolymer transport protein ExbD/TolR, and TonB, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2647_Mixed,_incl._Biopolymer_transport_protein_ExbD/TolR,_and_TonB,_C-terminal


id: CL:2651
description: Mixed, incl. Biopolymer transport protein ExbD/TolR, and Phosphate ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2651_Mixed,_incl._Biopolymer_transport_protein_ExbD/TolR,_and_Phosphate_ion_transport


id: CL:2668
description: GLPGLI family protein, and Lipoprotein metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2668_GLPGLI_family_protein,_and_Lipoprotein_metabolic_process


id: CL:2687
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2687_Mostly_uncharacterized,_incl._TRAM_domain,_and_6-O-methylguanine_DNA_methyltransferase,_DNA_binding_domain

description:
  Mostly uncharacterized, incl. TRAM domain, and 6-O-methylguanine DNA methyltransferase, DNA binding domain


id: CL:2689
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2689_Mixed,_incl._RNA_polymerase_binding,_and_Phosphatidic_acid_phosphatase_type_2/haloperoxidase_superfamily

description:
  Mixed, incl. RNA polymerase binding, and Phosphatidic acid phosphatase type 2/haloperoxidase superfamily


id: CL:2711
description: Lipoprotein transport, and MacB-like periplasmic core domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2711_Lipoprotein_transport,_and_MacB-like_periplasmic_core_domain


id: CL:2732
description: Mostly uncharacterized, incl. Protein stabilization, and C-type lectin fold
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2732_Mostly_uncharacterized,_incl._Protein_stabilization,_and_C-type_lectin_fold


id: CL:2735
description: Mixed, incl. Protein stabilization, and C-type lectin fold
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2735_Mixed,_incl._Protein_stabilization,_and_C-type_lectin_fold


id: CL:2738
description: Mixed, incl. C-type lectin fold, and Peptidoglycan glycosyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2738_Mixed,_incl._C-type_lectin_fold,_and_Peptidoglycan_glycosyltransferase_activity


id: CL:2741
description: Mixed, incl. C-type lectin fold, and Tetratricopeptide-like helical domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2741_Mixed,_incl._C-type_lectin_fold,_and_Tetratricopeptide-like_helical_domain_superfamily


id: CL:2781
description: Mixed, incl. MPN domain, and L,D-transpeptidase catalytic domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2781_Mixed,_incl._MPN_domain,_and_L,D-transpeptidase_catalytic_domain


id: CL:2795
description: Mixed, incl. Urocanate hydratase activity, and Lipopolysaccharide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2795_Mixed,_incl._Urocanate_hydratase_activity,_and_Lipopolysaccharide_transport


id: CL:2809
description: Mostly uncharacterized, incl. Membrane assembly, and DNA modification
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2809_Mostly_uncharacterized,_incl._Membrane_assembly,_and_DNA_modification


id: CL:2810
description: Mostly uncharacterized, incl. Membrane assembly, and DNA modification
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2810_Mostly_uncharacterized,_incl._Membrane_assembly,_and_DNA_modification


id: CL:2811
description: Mixed, incl. Membrane assembly, and DNA modification
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2811_Mixed,_incl._Membrane_assembly,_and_DNA_modification


id: CL:2812
description: Mostly uncharacterized, incl. DNA modification, and Serine-type endopeptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2812_Mostly_uncharacterized,_incl._DNA_modification,_and_Serine-type_endopeptidase_activity


id: CL:2814
description: Mostly uncharacterized, incl. GH3 family, and Signal peptide processing
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2814_Mostly_uncharacterized,_incl._GH3_family,_and_Signal_peptide_processing


id: CL:2818
description: Mixed, incl. Signal peptide processing, and Protein of unknown function DUF2723
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2818_Mixed,_incl._Signal_peptide_processing,_and_Protein_of_unknown_function_DUF2723


id: CL:2833
description: Mixed, incl. GH3 family, and Uroporphyrinogen-III synthase
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2833_Mixed,_incl._GH3_family,_and_Uroporphyrinogen-III_synthase


id: CL:2857
description: Membrane assembly, and PDZ domain 6
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2857_Membrane_assembly,_and_PDZ_domain_6


id: CL:2876
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2876_Mixed,_incl._Ion_channel,_and_Nitrogen_regulatory_protein_PII/ATP_phosphoribosyltransferase,_C-terminal

description:
  Mixed, incl. Ion channel, and Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal


id: CL:2885
description: Mixed, incl. TerB-like, and Sulfur metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2885_Mixed,_incl._TerB-like,_and_Sulfur_metabolism


id: CL:2894
description: Mixed, incl. Protein of unknown function DUF1573, and Transcription antitermination
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2894_Mixed,_incl._Protein_of_unknown_function_DUF1573,_and_Transcription_antitermination


id: CL:2906
description: Mixed, incl. Redoxin, and Glycosyl transferase family 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2906_Mixed,_incl._Redoxin,_and_Glycosyl_transferase_family_2


id: CL:2916
description: Mixed, incl. TAT protein transport complex, and Glycosyl hydrolase family 92
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2916_Mixed,_incl._TAT_protein_transport_complex,_and_Glycosyl_hydrolase_family_92


id: CL:2918
description: Mixed, incl. Glycosyl hydrolase family 92, and Polysaccharide biosynthesis protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2918_Mixed,_incl._Glycosyl_hydrolase_family_92,_and_Polysaccharide_biosynthesis_protein


id: CL:2934
description: Mixed, incl. Glycosyl transferase, family 9, and Bacterial exopeptidase dimerisation domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2934_Mixed,_incl._Glycosyl_transferase,_family_9,_and_Bacterial_exopeptidase_dimerisation_domain


id: CL:2944
description: Mixed, incl. TRAM domain, and Peptidase family S41
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2944_Mixed,_incl._TRAM_domain,_and_Peptidase_family_S41


id: CL:2962
description: Mixed, incl. Enoyl-(Acyl carrier protein) reductase, and Acid-thiol ligase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2962_Mixed,_incl._Enoyl-(Acyl_carrier_protein)_reductase,_and_Acid-thiol_ligase_activity


id: CL:2963
description: Mixed, incl. Acid-thiol ligase activity, and NUDIX hydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2963_Mixed,_incl._Acid-thiol_ligase_activity,_and_NUDIX_hydrolase


id: CL:2966
description: Mixed, incl. NUDIX hydrolase, and Acid-thiol ligase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2966_Mixed,_incl._NUDIX_hydrolase,_and_Acid-thiol_ligase_activity


id: CL:298
description: Protein-transporting ATPase activity, and Protein carrier chaperone
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:298_Protein-transporting_ATPase_activity,_and_Protein_carrier_chaperone


id: CL:2985
description: Enoyl-(Acyl carrier protein) reductase, and FAD binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:2985_Enoyl-(Acyl_carrier_protein)_reductase,_and_FAD_binding_domain


id: CL:3002
description: Mixed, incl. Regulation of cell shape, and Cell cycle
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3002_Mixed,_incl._Regulation_of_cell_shape,_and_Cell_cycle


id: CL:3003
description: Mixed, incl. Regulation of cell shape, and Cell cycle
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3003_Mixed,_incl._Regulation_of_cell_shape,_and_Cell_cycle


id: CL:3004
description: Mixed, incl. Regulation of cell shape, and Cell cycle
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3004_Mixed,_incl._Regulation_of_cell_shape,_and_Cell_cycle


id: CL:3005
description: Regulation of cell shape, and Cell cycle
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3005_Regulation_of_cell_shape,_and_Cell_cycle


id: CL:3007
description: Regulation of cell shape, and Penicillin-binding protein, dimerisation domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3007_Regulation_of_cell_shape,_and_Penicillin-binding_protein,_dimerisation_domain_superfamily


id: CL:3009
description: Cell cycle, and D-Alanine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3009_Cell_cycle,_and_D-Alanine_metabolism


id: CL:3014
description: Mur ligase, C-terminal, and Glycosyl transferase family 4
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3014_Mur_ligase,_C-terminal,_and_Glycosyl_transferase_family_4


id: CL:3046
description: Peptidoglycan glycosyltransferase activity, and Antibiotic resistance
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3046_Peptidoglycan_glycosyltransferase_activity,_and_Antibiotic_resistance


id: CL:3063
description: Mixed, incl. Cell gliding, and Chromosome partition
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3063_Mixed,_incl._Cell_gliding,_and_Chromosome_partition


id: CL:3076
description: Mixed, incl. Oxygen-insensitive NAD(P)H nitroreductase NfsB-like, and Folate biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3076_Mixed,_incl._Oxygen-insensitive_NAD(P)H_nitroreductase_NfsB-like,_and_Folate_biosynthesis


id: CL:3088
description: Mixed, incl. PASTA domain, and Coproporphyrinogen oxidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3088_Mixed,_incl._PASTA_domain,_and_Coproporphyrinogen_oxidase_activity


id: CL:3105
description: Mixed, incl. Cell gliding, and Transglycosylase
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3105_Mixed,_incl._Cell_gliding,_and_Transglycosylase


id: CL:3126
description: Mixed, incl. Lipopolysaccharide biosynthesis, and Permease LptG/LptF-related
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3126_Mixed,_incl._Lipopolysaccharide_biosynthesis,_and_Permease_LptG/LptF-related


id: CL:3127
description: Mixed, incl. Lipid A biosynthesis, and Lipopolysaccharide biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3127_Mixed,_incl._Lipid_A_biosynthesis,_and_Lipopolysaccharide_biosynthesis


id: CL:3129
description: Lipid A biosynthesis, and Lipopolysaccharide biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3129_Lipid_A_biosynthesis,_and_Lipopolysaccharide_biosynthesis


id: CL:314
description: Ribosomal small subunit biogenesis, and tRNA pseudouridine synthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:314_Ribosomal_small_subunit_biogenesis,_and_tRNA_pseudouridine_synthesis


id: CL:3161
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3161_Mixed,_incl._Extrinsic_component_of_plasma_membrane,_and_Hedgehog_signalling/DD-peptidase_zinc-binding_domain_superfamily

description:
  Mixed, incl. Extrinsic component of plasma membrane, and Hedgehog signalling/DD-peptidase zinc-binding domain superfamily


id: CL:3186
description: Mixed, incl. Signal, and Polysaccharide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3186_Mixed,_incl._Signal,_and_Polysaccharide_biosynthetic_process


id: CL:3187
description: Mixed, incl. Signal, and Polysaccharide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3187_Mixed,_incl._Signal,_and_Polysaccharide_biosynthetic_process


id: CL:3188
description: Mixed, incl. Signal, and Polysaccharide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3188_Mixed,_incl._Signal,_and_Polysaccharide_biosynthetic_process


id: CL:3189
description: Mixed, incl. Signal, and VanZ-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3189_Mixed,_incl._Signal,_and_VanZ-like


id: CL:3190
description: Mixed, incl. Envelope, and Cellular carbohydrate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3190_Mixed,_incl._Envelope,_and_Cellular_carbohydrate_biosynthetic_process


id: CL:3191
description: Mixed, incl. Envelope, and VanZ-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3191_Mixed,_incl._Envelope,_and_VanZ-like


id: CL:3192
description: Mostly uncharacterized, incl. Carboxypeptidase-like, regulatory domain superfamily, and VanZ-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3192_Mostly_uncharacterized,_incl._Carboxypeptidase-like,_regulatory_domain_superfamily,_and_VanZ-like


id: CL:3193
description: Mostly uncharacterized, incl. Carboxypeptidase-like, regulatory domain superfamily, and VanZ-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3193_Mostly_uncharacterized,_incl._Carboxypeptidase-like,_regulatory_domain_superfamily,_and_VanZ-like


id: CL:3194
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3194_Mostly_uncharacterized,_incl._Glycosyl_hydrolase,_five-bladed_beta-propellor_domain_superfamily,_and_Carboxypeptidase-like,_regulatory_domain_superfamily

description:
  Mostly uncharacterized, incl. Glycosyl hydrolase, five-bladed beta-propellor domain superfamily, and Carboxypeptidase-like, regulatory domain superfamily


id: CL:3195
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3195_Mostly_uncharacterized,_incl._Glycosyl_hydrolase,_five-bladed_beta-propellor_domain_superfamily,_and_Domain_of_unknown_function_DUF4960

description:
  Mostly uncharacterized, incl. Glycosyl hydrolase, five-bladed beta-propellor domain superfamily, and Domain of unknown function DUF4960


id: CL:3196
description: Mixed, incl. EpsG family, and VanZ-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3196_Mixed,_incl._EpsG_family,_and_VanZ-like


id: CL:3198
description: Mostly uncharacterized, incl. Carbohydrate binding domain, and Domain of unknown function DUF4960
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3198_Mostly_uncharacterized,_incl._Carbohydrate_binding_domain,_and_Domain_of_unknown_function_DUF4960


id: CL:3199
description: Mixed, incl. VanZ-like, and Catalase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3199_Mixed,_incl._VanZ-like,_and_Catalase_superfamily


id: CL:3211
description: Mixed, incl. Carbohydrate binding domain, and Domain of unknown function DUF4960
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3211_Mixed,_incl._Carbohydrate_binding_domain,_and_Domain_of_unknown_function_DUF4960


id: CL:3234
description: Mixed, incl. Glycosyl hydrolases family 32, and Domain of unknown function DUF4960
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3234_Mixed,_incl._Glycosyl_hydrolases_family_32,_and_Domain_of_unknown_function_DUF4960


id: CL:3246
description: Mostly uncharacterized, incl. Capsule organization, and Tetrapyrrole methylase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3246_Mostly_uncharacterized,_incl._Capsule_organization,_and_Tetrapyrrole_methylase_superfamily


id: CL:3248
description: Mixed, incl. Capsule organization, and Immunoglobulin-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3248_Mixed,_incl._Capsule_organization,_and_Immunoglobulin-like_domain_superfamily


id: CL:3267
description: Mixed, incl. Sulfur compound catabolic process, and Domain of unknown function DUF4349
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3267_Mixed,_incl._Sulfur_compound_catabolic_process,_and_Domain_of_unknown_function_DUF4349


id: CL:3270
description: Mixed, incl. Sulfur compound catabolic process, and Domain of unknown function DUF4349
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3270_Mixed,_incl._Sulfur_compound_catabolic_process,_and_Domain_of_unknown_function_DUF4349


id: CL:3287
description: Mixed, incl. Regulation of protein transport, and PKD domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3287_Mixed,_incl._Regulation_of_protein_transport,_and_PKD_domain_superfamily


id: CL:3305
description: Mostly uncharacterized, incl. Predicted HD phosphohydrolase, and Calcineurin-like phosphoesterase
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3305_Mostly_uncharacterized,_incl._Predicted_HD_phosphohydrolase,_and_Calcineurin-like_phosphoesterase


id: CL:3307
description: Mixed, incl. Predicted HD phosphohydrolase, and Calcineurin-like phosphoesterase
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3307_Mixed,_incl._Predicted_HD_phosphohydrolase,_and_Calcineurin-like_phosphoesterase


id: CL:3319
description: Mixed, incl. ABC transporter-like, conserved site, and ABC-type transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3319_Mixed,_incl._ABC_transporter-like,_conserved_site,_and_ABC-type_transporter_activity


id: CL:3328
description: Mixed, incl. Sulfatase, and Acid phosphatase homologues
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3328_Mixed,_incl._Sulfatase,_and_Acid_phosphatase_homologues


id: CL:3337
description: Mostly uncharacterized, incl. Two-component regulatory system, and Redoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3337_Mostly_uncharacterized,_incl._Two-component_regulatory_system,_and_Redoxin


id: CL:3339
description: Mixed, incl. Two-component regulatory system, and Polyol catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3339_Mixed,_incl._Two-component_regulatory_system,_and_Polyol_catabolic_process


id: CL:3340
description: Mixed, incl. Two-component regulatory system, and Protein of unknown function DUF1275
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3340_Mixed,_incl._Two-component_regulatory_system,_and_Protein_of_unknown_function_DUF1275


id: CL:335
description: Aminoacyl-tRNA synthetase, class I, conserved site, and tRNA synthetases class I (M)
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:335_Aminoacyl-tRNA_synthetase,_class_I,_conserved_site,_and_tRNA_synthetases_class_I_(M)


id: CL:3351
description: Mixed, incl. Polyol catabolic process, and Di-haem cytochrome c peroxidase
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3351_Mixed,_incl._Polyol_catabolic_process,_and_Di-haem_cytochrome_c_peroxidase


id: CL:3366
description: Mixed, incl. Redoxin, and Ribonucleotide reductase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3366_Mixed,_incl._Redoxin,_and_Ribonucleotide_reductase-like


id: CL:3381
description: Mixed, incl. AI-2E family transporter, and Glycosyl transferase, family 9
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3381_Mixed,_incl._AI-2E_family_transporter,_and_Glycosyl_transferase,_family_9


id: CL:3391
description: Mixed, incl. MFS/sugar transport protein, and Sigma-70, region 4
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3391_Mixed,_incl._MFS/sugar_transport_protein,_and_Sigma-70,_region_4


id: CL:3402
description: Mixed, incl. Protein of unknown function DUF4252, and Protein of unknown function DUF2752
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3402_Mixed,_incl._Protein_of_unknown_function_DUF4252,_and_Protein_of_unknown_function_DUF2752


id: CL:3404
description: Mixed, incl. Protein of unknown function DUF4252, and Sigma-70, region 4
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3404_Mixed,_incl._Protein_of_unknown_function_DUF4252,_and_Sigma-70,_region_4


id: CL:3428
description: Mixed, incl. RNA 3-end processing, and Endonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3428_Mixed,_incl._RNA_3-end_processing,_and_Endonuclease_activity


id: CL:3443
description: Mixed, incl. DinB/YfiT-like putative metalloenzymes, and Barstar-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3443_Mixed,_incl._DinB/YfiT-like_putative_metalloenzymes,_and_Barstar-like_superfamily


id: CL:3444
description: Mixed, incl. DNA damage-inducible protein DinB, and Phosphoribosyl-ATP pyrophosphohydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3444_Mixed,_incl._DNA_damage-inducible_protein_DinB,_and_Phosphoribosyl-ATP_pyrophosphohydrolase


id: CL:3457
description: Mixed, incl. Barstar-like superfamily, and Protein of unknown function (DUF664)
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3457_Mixed,_incl._Barstar-like_superfamily,_and_Protein_of_unknown_function_(DUF664)


id: CL:3469
description: Mixed, incl. Von Willebrand factor, type A, and Tetratricopeptide repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3469_Mixed,_incl._Von_Willebrand_factor,_type_A,_and_Tetratricopeptide_repeat


id: CL:3471
description: Von Willebrand factor, type A, and Tetratricopeptide repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3471_Von_Willebrand_factor,_type_A,_and_Tetratricopeptide_repeat


id: CL:3493
description: Glycerophospholipid metabolism, and Antibiotic resistance
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3493_Glycerophospholipid_metabolism,_and_Antibiotic_resistance


id: CL:3495
description: Mixed, incl. Phospholipid metabolism, and NAD+ kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3495_Mixed,_incl._Phospholipid_metabolism,_and_NAD+_kinase_activity


id: CL:3526
description: Mixed, incl. Menaquinone biosynthesis, and Ubiquinone and other terpenoid-quinone biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3526_Mixed,_incl._Menaquinone_biosynthesis,_and_Ubiquinone_and_other_terpenoid-quinone_biosynthesis


id: CL:3527
description: Mixed, incl. Menaquinone biosynthesis, and Enolase-like, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3527_Mixed,_incl._Menaquinone_biosynthesis,_and_Enolase-like,_N-terminal


id: CL:3529
description: Menaquinone biosynthesis, and ADC synthase
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3529_Menaquinone_biosynthesis,_and_ADC_synthase


id: CL:354
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:354_Class_I_and_II_aminoacyl-tRNA_synthetase,_tRNA-binding_arm,_and_Threonyl/alanyl_tRNA_synthetase,_SAD

description:
  Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm, and Threonyl/alanyl tRNA synthetase, SAD


id: CL:3541
description: Mixed, incl. Lactone catabolic process, and Glycosyl transferase family 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3541_Mixed,_incl._Lactone_catabolic_process,_and_Glycosyl_transferase_family_2


id: CL:3551
description: Mixed, incl. Positive regulation of RNA metabolic process, and Phosphate acyltransferases
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3551_Mixed,_incl._Positive_regulation_of_RNA_metabolic_process,_and_Phosphate_acyltransferases


id: CL:3564
description: Mostly uncharacterized, incl. Asparagine synthase, and Nucleoside recognition
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3564_Mostly_uncharacterized,_incl._Asparagine_synthase,_and_Nucleoside_recognition


id: CL:3565
description: Mostly uncharacterized, incl. Nucleoside recognition, and Ferrous iron transporter FeoA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3565_Mostly_uncharacterized,_incl._Nucleoside_recognition,_and_Ferrous_iron_transporter_FeoA_domain


id: CL:3568
description: Mixed, incl. Nucleoside recognition, and Ferrous iron transporter FeoA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3568_Mixed,_incl._Nucleoside_recognition,_and_Ferrous_iron_transporter_FeoA_domain


id: CL:3588
description: Mixed, incl. Asparagine synthase, and Polysaccharide biosynthesis protein, C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3588_Mixed,_incl._Asparagine_synthase,_and_Polysaccharide_biosynthesis_protein,_C-terminal_domain


id: CL:3602
description: Mixed, incl. AAA domain, and Lactone biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3602_Mixed,_incl._AAA_domain,_and_Lactone_biosynthetic_process


id: CL:3614
description: Mixed, incl. Heme binding, and Metal cluster binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3614_Mixed,_incl._Heme_binding,_and_Metal_cluster_binding


id: CL:3615
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3615_Mostly_uncharacterized,_incl._Protein_of_unknown_function_DUF6702,_and_Regulation_of_biological_quality

description:
  Mostly uncharacterized, incl. Protein of unknown function DUF6702, and Regulation of biological quality


id: CL:3616
description: Mostly uncharacterized, incl. Protein of unknown function DUF6702, and LOG family
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3616_Mostly_uncharacterized,_incl._Protein_of_unknown_function_DUF6702,_and_LOG_family


id: CL:3618
description: Mixed, incl. Protein of unknown function DUF6702, and LOG family
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3618_Mixed,_incl._Protein_of_unknown_function_DUF6702,_and_LOG_family


id: CL:3635
description: Mixed, incl. Protein of unknown function DUF1569, and Protein of unknown function DUF2723
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3635_Mixed,_incl._Protein_of_unknown_function_DUF1569,_and_Protein_of_unknown_function_DUF2723


id: CL:3651
description: Mostly uncharacterized, incl. Peroxiredoxin-like 1, and Methyltransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3651_Mostly_uncharacterized,_incl._Peroxiredoxin-like_1,_and_Methyltransferase_domain


id: CL:3653
description: Mixed, incl. Methyltransferase domain, and Enzyme binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3653_Mixed,_incl._Methyltransferase_domain,_and_Enzyme_binding


id: CL:3667
description: Mixed, incl. Peroxiredoxin-like 1, and Deacetylase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3667_Mixed,_incl._Peroxiredoxin-like_1,_and_Deacetylase_activity


id: CL:3680
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3680_Mixed,_incl._Cytochrome_c-like_domain_superfamily,_and_4Fe-4S_ferredoxin-type,_iron-sulphur_binding_domain

description:
  Mixed, incl. Cytochrome c-like domain superfamily, and 4Fe-4S ferredoxin-type, iron-sulphur binding domain


id: CL:3681
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3681_Mixed,_incl._Cytochrome_c-like_domain_superfamily,_and_4Fe-4S_ferredoxin-type,_iron-sulphur_binding_domain

description:
  Mixed, incl. Cytochrome c-like domain superfamily, and 4Fe-4S ferredoxin-type, iron-sulphur binding domain


id: CL:3684
description: Mixed, incl. Cytochrome c-like domain, and 4Fe-4S ferredoxin-type, iron-sulphur binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3684_Mixed,_incl._Cytochrome_c-like_domain,_and_4Fe-4S_ferredoxin-type,_iron-sulphur_binding_domain


id: CL:3686
description: Mixed, incl. Cytochrome c-like domain, and 4Fe-4S binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3686_Mixed,_incl._Cytochrome_c-like_domain,_and_4Fe-4S_binding_domain


id: CL:3689
description: Respiratory chain, and N-terminal domain of cytochrome oxidase-cbb3, FixP
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3689_Respiratory_chain,_and_N-terminal_domain_of_cytochrome_oxidase-cbb3,_FixP


id: CL:3709
description: Mixed, incl. Aspartate decarboxylase-like domain superfamily, and Plant-pathogen interaction
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3709_Mixed,_incl._Aspartate_decarboxylase-like_domain_superfamily,_and_Plant-pathogen_interaction


id: CL:3728
description: Mixed, incl. DCC1-like thiol-disulfide oxidoreductase family, and Haem-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3728_Mixed,_incl._DCC1-like_thiol-disulfide_oxidoreductase_family,_and_Haem-binding_domain


id: CL:3743
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3743_Mixed,_incl._Secretion_system_C-terminal_sorting_domain,_and_Tetratricopeptide-like_helical_domain_superfamily

description:
  Mixed, incl. Secretion system C-terminal sorting domain, and Tetratricopeptide-like helical domain superfamily


id: CL:3744
description: Mixed, incl. Secretion system C-terminal sorting domain, and DNA binding HTH domain, AraC-type
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3744_Mixed,_incl._Secretion_system_C-terminal_sorting_domain,_and_DNA_binding_HTH_domain,_AraC-type


id: CL:3745
description: Mixed, incl. Secretion system C-terminal sorting domain, and DNA binding HTH domain, AraC-type
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3745_Mixed,_incl._Secretion_system_C-terminal_sorting_domain,_and_DNA_binding_HTH_domain,_AraC-type


id: CL:3746
description: Secretion system C-terminal sorting domain, and DNA binding HTH domain, AraC-type
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3746_Secretion_system_C-terminal_sorting_domain,_and_DNA_binding_HTH_domain,_AraC-type


id: CL:3747
description: Secretion system C-terminal sorting domain, and DNA binding HTH domain, AraC-type
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3747_Secretion_system_C-terminal_sorting_domain,_and_DNA_binding_HTH_domain,_AraC-type


id: CL:3748
description: Secretion system C-terminal sorting domain, and DNA binding HTH domain, AraC-type
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3748_Secretion_system_C-terminal_sorting_domain,_and_DNA_binding_HTH_domain,_AraC-type


id: CL:3750
description: Secretion system C-terminal sorting domain, and CHU_C Type IX secretion signal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3750_Secretion_system_C-terminal_sorting_domain,_and_CHU_C_Type_IX_secretion_signal_domain


id: CL:3752
description: Secretion system C-terminal sorting domain, and CHU_C Type IX secretion signal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3752_Secretion_system_C-terminal_sorting_domain,_and_CHU_C_Type_IX_secretion_signal_domain


id: CL:3753
description: Secretion system C-terminal sorting domain, and Gingipain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3753_Secretion_system_C-terminal_sorting_domain,_and_Gingipain


id: CL:3755
description: Secretion system C-terminal sorting domain, and Gingipain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3755_Secretion_system_C-terminal_sorting_domain,_and_Gingipain


id: CL:3757
description: Secretion system C-terminal sorting domain, and Gingipain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3757_Secretion_system_C-terminal_sorting_domain,_and_Gingipain


id: CL:3758
description: Secretion system C-terminal sorting domain, and Gingipain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3758_Secretion_system_C-terminal_sorting_domain,_and_Gingipain


id: CL:3760
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3760_Concanavalin_A-like_lectin/glucanase_domain_superfamily,_and_Secretion_system_C-terminal_sorting_domain

description:
  Concanavalin A-like lectin/glucanase domain superfamily, and Secretion system C-terminal sorting domain


id: CL:3761
description: Secretion system C-terminal sorting domain, and Gingipain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3761_Secretion_system_C-terminal_sorting_domain,_and_Gingipain


id: CL:3764
description: Mixed, incl. Gingipain, and PA14/GLEYA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3764_Mixed,_incl._Gingipain,_and_PA14/GLEYA_domain


id: CL:377
description: RNA helicase activity, and Ribosomal protein S1-like RNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:377_RNA_helicase_activity,_and_Ribosomal_protein_S1-like_RNA-binding_domain


id: CL:378
description: Mixed, incl. Carbohydrate kinase, and Exoribonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:378_Mixed,_incl._Carbohydrate_kinase,_and_Exoribonuclease_activity


id: CL:3780
description: Mixed, incl. CHU_C Type IX secretion signal domain, and Immunoglobulin-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3780_Mixed,_incl._CHU_C_Type_IX_secretion_signal_domain,_and_Immunoglobulin-like_domain


id: CL:3793
description: Mixed, incl. HYR domain, and GEVED domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3793_Mixed,_incl._HYR_domain,_and_GEVED_domain


id: CL:3820
description: Mixed, incl. Cleaved adhesin, and Parallel beta-helix repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3820_Mixed,_incl._Cleaved_adhesin,_and_Parallel_beta-helix_repeat


id: CL:3853
description: Mixed, incl. Delta-60 repeat, and Cellulase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3853_Mixed,_incl._Delta-60_repeat,_and_Cellulase_activity


id: CL:3855
description: Mixed, incl. Cellulase activity, and Collagen
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3855_Mixed,_incl._Cellulase_activity,_and_Collagen


id: CL:387
description: RNA helicase, DEAD-box type, Q motif, and K Homology domain, type 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:387_RNA_helicase,_DEAD-box_type,_Q_motif,_and_K_Homology_domain,_type_1


id: CL:3871
description: Mixed, incl. Delta-60 repeat, and CUB domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3871_Mixed,_incl._Delta-60_repeat,_and_CUB_domain


id: CL:3883
description: Mixed, incl. PDZ domain 6, and ER-Phagosome pathway
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3883_Mixed,_incl._PDZ_domain_6,_and_ER-Phagosome_pathway


id: CL:3904
description: Mixed, incl. HmuY protein, and SbsA, Ig-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3904_Mixed,_incl._HmuY_protein,_and_SbsA,_Ig-like_domain


id: CL:3922
description: Mixed, incl. Helix_turn_helix, arabinose operon control protein, and FG-GAP repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3922_Mixed,_incl._Helix_turn_helix,_arabinose_operon_control_protein,_and_FG-GAP_repeat


id: CL:3923
description: Mixed, incl. Tetratricopeptide repeat, and FG-GAP repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3923_Mixed,_incl._Tetratricopeptide_repeat,_and_FG-GAP_repeat


id: CL:3926
description: Mixed, incl. Tyrosinase activity, and Tetratricopeptide repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3926_Mixed,_incl._Tyrosinase_activity,_and_Tetratricopeptide_repeat


id: CL:3928
description: Mixed, incl. Tyrosinase activity, and Tetratricopeptide repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3928_Mixed,_incl._Tyrosinase_activity,_and_Tetratricopeptide_repeat


id: CL:3929
description: Mixed, incl. Tetratricopeptide repeat, and Gingipain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3929_Mixed,_incl._Tetratricopeptide_repeat,_and_Gingipain


id: CL:3930
description: Mixed, incl. Gingipain, and Cyclase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3930_Mixed,_incl._Gingipain,_and_Cyclase_activity


id: CL:3941
description: Mixed, incl. Bacterial regulatory proteins, luxR family, and FG-GAP repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3941_Mixed,_incl._Bacterial_regulatory_proteins,_luxR_family,_and_FG-GAP_repeat


id: CL:3952
description: Mixed, incl. Tyrosinase activity, and Bacterial-type flagellum organization
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3952_Mixed,_incl._Tyrosinase_activity,_and_Bacterial-type_flagellum_organization


id: CL:3977
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3977_Mixed,_incl._Protein_of_unknown_function_DUF1569,_and_NADH:flavin_oxidoreductase_/_NADH_oxidase_family

description:
  Mixed, incl. Protein of unknown function DUF1569, and NADH:flavin oxidoreductase / NADH oxidase family


id: CL:3986
description: Helix_turn_helix, arabinose operon control protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3986_Helix_turn_helix,_arabinose_operon_control_protein


id: CL:3988
description: Helix_turn_helix, arabinose operon control protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:3988_Helix_turn_helix,_arabinose_operon_control_protein


id: CL:4006
description: Collagen, and Cellulase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4006_Collagen,_and_Cellulase_activity


id: CL:4022
description: Mixed, incl. ANK repeat, and Evasion of host immune response
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4022_Mixed,_incl._ANK_repeat,_and_Evasion_of_host_immune_response


id: CL:4033
description: Mostly uncharacterized, incl. Defense response to virus, and Restriction endonuclease type II-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4033_Mostly_uncharacterized,_incl._Defense_response_to_virus,_and_Restriction_endonuclease_type_II-like


id: CL:4034
description: Mostly uncharacterized, incl. Restriction endonuclease type II-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4034_Mostly_uncharacterized,_incl._Restriction_endonuclease_type_II-like


id: CL:404
description: Mixed, incl. SpoU rRNA Methylase family, and RNA pseudouridylate synthase
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:404_Mixed,_incl._SpoU_rRNA_Methylase_family,_and_RNA_pseudouridylate_synthase


id: CL:4045
description: Mixed, incl. Defense response to virus, and Listeria monocytogenes entry into host cells
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4045_Mixed,_incl._Defense_response_to_virus,_and_Listeria_monocytogenes_entry_into_host_cells


id: CL:4055
description: Mixed, incl. Alpha-galactosidase activity, and MazG nucleotide pyrophosphohydrolase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4055_Mixed,_incl._Alpha-galactosidase_activity,_and_MazG_nucleotide_pyrophosphohydrolase_domain


id: CL:4065
description: Mixed, incl. Glucan metabolic process, and Starch and sucrose metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4065_Mixed,_incl._Glucan_metabolic_process,_and_Starch_and_sucrose_metabolism


id: CL:4066
description: Mixed, incl. Glucan metabolic process, and Glycosyl hydrolase, family 13, catalytic domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4066_Mixed,_incl._Glucan_metabolic_process,_and_Glycosyl_hydrolase,_family_13,_catalytic_domain


id: CL:4068
description: Mixed, incl. Glucan biosynthetic process, and Starch binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4068_Mixed,_incl._Glucan_biosynthetic_process,_and_Starch_binding


id: CL:4069
description: Mixed, incl. Starch binding, and Glycoside hydrolase 97
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4069_Mixed,_incl._Starch_binding,_and_Glycoside_hydrolase_97


id: CL:407
description: Mixed, incl. 50S ribosomal protein L30e-like, and RNA pseudouridylate synthase
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:407_Mixed,_incl._50S_ribosomal_protein_L30e-like,_and_RNA_pseudouridylate_synthase


id: CL:4070
description: Starch binding, and ATPase-coupled ion transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4070_Starch_binding,_and_ATPase-coupled_ion_transmembrane_transporter_activity


id: CL:4081
description: Glycoside hydrolase 97 , and Alpha-glucan metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4081_Glycoside_hydrolase_97__,_and_Alpha-glucan_metabolic_process


id: CL:4093
description: Glycogen metabolic process, and Calcium
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4093_Glycogen_metabolic_process,_and_Calcium


id: CL:4124
description: Mixed, incl. ELWxxDGT repeat, and PepSY domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4124_Mixed,_incl._ELWxxDGT_repeat,_and_PepSY_domain


id: CL:4142
description: Mixed, incl. Cell outer membrane, and Signal transduction response regulator, C-terminal effector
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4142_Mixed,_incl._Cell_outer_membrane,_and_Signal_transduction_response_regulator,_C-terminal_effector


id: CL:4143
description: Mixed, incl. Cell outer membrane, and Signal transduction response regulator, C-terminal effector
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4143_Mixed,_incl._Cell_outer_membrane,_and_Signal_transduction_response_regulator,_C-terminal_effector


id: CL:4145
description: Mixed, incl. Cell outer membrane, and Signal transduction response regulator, C-terminal effector
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4145_Mixed,_incl._Cell_outer_membrane,_and_Signal_transduction_response_regulator,_C-terminal_effector


id: CL:4146
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4146_Mixed,_incl._TonB-dependent_receptor-like,_beta-barrel_domain_superfamily,_and_SusD-like,_N-terminal

description:
  Mixed, incl. TonB-dependent receptor-like, beta-barrel domain superfamily, and SusD-like, N-terminal


id: CL:4147
description: Mixed, incl. Outer membrane protein beta-barrel family, and SusD-like, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4147_Mixed,_incl._Outer_membrane_protein_beta-barrel_family,_and_SusD-like,_N-terminal


id: CL:4148
description: Mixed, incl. Outer membrane protein beta-barrel family, and SusD-like, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4148_Mixed,_incl._Outer_membrane_protein_beta-barrel_family,_and_SusD-like,_N-terminal


id: CL:4149
description: Mixed, incl. Outer membrane protein beta-barrel family, and Protein of unknown function DUF3667
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4149_Mixed,_incl._Outer_membrane_protein_beta-barrel_family,_and_Protein_of_unknown_function_DUF3667


id: CL:4152
description: Mixed, incl. Protein of unknown function DUF3667, and SusD-like, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4152_Mixed,_incl._Protein_of_unknown_function_DUF3667,_and_SusD-like,_N-terminal


id: CL:4172
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4172_Mixed,_incl._SusD-like,_N-terminal,_and_TonB-dependent_outer_membrane_protein_SusC/RagA,_conserved_site

description:
  Mixed, incl. SusD-like, N-terminal, and TonB-dependent outer membrane protein SusC/RagA, conserved site


id: CL:4174
description: Putative glucoamylase, and Signal transduction response regulator, C-terminal effector
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4174_Putative_glucoamylase,_and_Signal_transduction_response_regulator,_C-terminal_effector


id: CL:4184
description: SusD-like, N-terminal, and Extracellular space
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4184_SusD-like,_N-terminal,_and_Extracellular_space


id: CL:4195
description: Mixed, incl. Domain of unknown function DUF11, and Outer membrane protein beta-barrel domain 3
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4195_Mixed,_incl._Domain_of_unknown_function_DUF11,_and_Outer_membrane_protein_beta-barrel_domain_3


id: CL:4212
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4212_Mostly_uncharacterized,_incl._WD40/YVTN_repeat-like-containing_domain_superfamily,_and_TonB-dependent_receptor-like

description:
  Mostly uncharacterized, incl. WD40/YVTN repeat-like-containing domain superfamily, and TonB-dependent receptor-like


id: CL:4215
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4215_Mostly_uncharacterized,_incl._Di-haem_cytochrome_c_peroxidase,_and_Quinoprotein_amine_dehydrogenase,_beta_chain-like

description:
  Mostly uncharacterized, incl. Di-haem cytochrome c peroxidase, and Quinoprotein amine dehydrogenase, beta chain-like


id: CL:4217
description: Mixed, incl. Quinoprotein amine dehydrogenase, beta chain-like, and Cell envelope organization
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4217_Mixed,_incl._Quinoprotein_amine_dehydrogenase,_beta_chain-like,_and_Cell_envelope_organization


id: CL:424
description: tRNA wobble uridine modification, and RNA (guanine-N7)-methylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:424_tRNA_wobble_uridine_modification,_and_RNA_(guanine-N7)-methylation


id: CL:4242
description: Mixed, incl. Protein of unknown function DUF3078, and NodB homology domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4242_Mixed,_incl._Protein_of_unknown_function_DUF3078,_and_NodB_homology_domain


id: CL:4253
description: Mixed, incl. Extracellular space, and NADP oxidoreductase coenzyme F420-dependent
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4253_Mixed,_incl._Extracellular_space,_and_NADP_oxidoreductase_coenzyme_F420-dependent


id: CL:4271
description: Mixed, incl. Sigma factor antagonist activity, and Histidine phosphatase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4271_Mixed,_incl._Sigma_factor_antagonist_activity,_and_Histidine_phosphatase_superfamily


id: CL:4284
description: Mostly uncharacterized, incl. Barstar-like superfamily, and Protein of unknown function DUF3667
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4284_Mostly_uncharacterized,_incl._Barstar-like_superfamily,_and_Protein_of_unknown_function_DUF3667


id: CL:4287
description: Mixed, incl. Barstar-like superfamily, and Sigma-70, region 4
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4287_Mixed,_incl._Barstar-like_superfamily,_and_Sigma-70,_region_4


id: CL:4302
description: Mixed, incl. Negative regulation of cellular process, and TonB-dependent receptor-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4302_Mixed,_incl._Negative_regulation_of_cellular_process,_and_TonB-dependent_receptor-like


id: CL:4311
description: Mostly uncharacterized, incl. Primosome complex, and Envelope
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4311_Mostly_uncharacterized,_incl._Primosome_complex,_and_Envelope


id: CL:4312
description: Mostly uncharacterized, incl. Envelope, and Phage tail collar domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4312_Mostly_uncharacterized,_incl._Envelope,_and_Phage_tail_collar_domain


id: CL:4313
description: Mostly uncharacterized, incl. Phage tail collar domain, and Primosome complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4313_Mostly_uncharacterized,_incl._Phage_tail_collar_domain,_and_Primosome_complex


id: CL:4314
description: Mostly uncharacterized, incl. Primosome complex, and CarboxypepD_reg-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4314_Mostly_uncharacterized,_incl._Primosome_complex,_and_CarboxypepD_reg-like_domain


id: CL:4315
description: Mostly uncharacterized, incl. Primosome complex, and CarboxypepD_reg-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4315_Mostly_uncharacterized,_incl._Primosome_complex,_and_CarboxypepD_reg-like_domain


id: CL:4316
description: Mostly uncharacterized, incl. CarboxypepD_reg-like domain, and Domain of unknown function DUF3857
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4316_Mostly_uncharacterized,_incl._CarboxypepD_reg-like_domain,_and_Domain_of_unknown_function_DUF3857


id: CL:4317
description: Mixed, incl. Domain of unknown function DUF3857, and CarboxypepD_reg-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4317_Mixed,_incl._Domain_of_unknown_function_DUF3857,_and_CarboxypepD_reg-like_domain


id: CL:4319
description: Mixed, incl. Domain of unknown function DUF3857, and Ferritin
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4319_Mixed,_incl._Domain_of_unknown_function_DUF3857,_and_Ferritin


id: CL:4337
description: Mixed, incl. Protein import, and Outer membrane-bounded periplasmic space
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4337_Mixed,_incl._Protein_import,_and_Outer_membrane-bounded_periplasmic_space


id: CL:4349
description: Mixed, incl. Prolyl oligopeptidase family, and SusD-like, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4349_Mixed,_incl._Prolyl_oligopeptidase_family,_and_SusD-like,_N-terminal


id: CL:4350
description: Mixed, incl. RteC protein, and Prolyl oligopeptidase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4350_Mixed,_incl._RteC_protein,_and_Prolyl_oligopeptidase_family


id: CL:4361
description: Mixed, incl. Prolyl oligopeptidase family, and Transposition
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4361_Mixed,_incl._Prolyl_oligopeptidase_family,_and_Transposition


id: CL:4377
description: Mixed, incl. Primosome complex, and RteC protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4377_Mixed,_incl._Primosome_complex,_and_RteC_protein


id: CL:4380
description: Primosome complex, and RteC protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4380_Primosome_complex,_and_RteC_protein


id: CL:440
description: Mixed, incl. Protein folding, and MerR-type HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:440_Mixed,_incl._Protein_folding,_and_MerR-type_HTH_domain


id: CL:4401
description: Mixed, incl. Dimeric alpha-beta barrel, and ABC transporter-like, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4401_Mixed,_incl._Dimeric_alpha-beta_barrel,_and_ABC_transporter-like,_conserved_site


id: CL:4417
description: Mixed, incl. Phage tail collar domain, and Secretion system C-terminal sorting domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4417_Mixed,_incl._Phage_tail_collar_domain,_and_Secretion_system_C-terminal_sorting_domain


id: CL:442
description: Mixed, incl. Chaperone, and MerR-type HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:442_Mixed,_incl._Chaperone,_and_MerR-type_HTH_domain


id: CL:4431
description: Mixed, incl. Protein of unknown function DUF4153, and Organelle membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4431_Mixed,_incl._Protein_of_unknown_function_DUF4153,_and_Organelle_membrane


id: CL:444
description: Chaperone, and ATP-dependent peptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:444_Chaperone,_and_ATP-dependent_peptidase_activity


id: CL:4446
description: Primosome complex, and Arm, DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4446_Primosome_complex,_and_Arm,_DNA-binding_domain


id: CL:4460
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4460_Mostly_uncharacterized,_incl._Streptothricin_acetyltransferase,_and_Pyridoxal_phosphate_homeostasis_protein

description:
  Mostly uncharacterized, incl. Streptothricin acetyltransferase, and Pyridoxal phosphate homeostasis protein


id: CL:4461
description: Mixed, incl. ELWxxDGT repeat, and EamA-like transporter family
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4461_Mixed,_incl._ELWxxDGT_repeat,_and_EamA-like_transporter_family


id: CL:447
description: Protein folding chaperone, and Chaperone binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:447_Protein_folding_chaperone,_and_Chaperone_binding


id: CL:4476
description: Mixed, incl. Streptothricin acetyltransferase, and Pyridoxal phosphate homeostasis protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4476_Mixed,_incl._Streptothricin_acetyltransferase,_and_Pyridoxal_phosphate_homeostasis_protein


id: CL:4487
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4487_Mixed,_incl._Large_cysteine-rich_periplasmic_protein_OmcB-like,_DUF11_domain,_and_Serine-type_endopeptidase_activity

description:
  Mixed, incl. Large cysteine-rich periplasmic protein OmcB-like, DUF11 domain, and Serine-type endopeptidase activity


id: CL:4498
description: Mixed, incl. UPF0759 superfamily, and Siderophore transmembrane transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4498_Mixed,_incl._UPF0759_superfamily,_and_Siderophore_transmembrane_transport


id: CL:4499
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4499_Mixed,_incl._Siderophore_transmembrane_transport,_and_Valyl-tRNA_synthetase,_tRNA-binding_arm_superfamily

description:
  Mixed, incl. Siderophore transmembrane transport, and Valyl-tRNA synthetase, tRNA-binding arm superfamily


id: CL:4510
description: Mixed, incl. UPF0759 superfamily, and Carbon-nitrogen hydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4510_Mixed,_incl._UPF0759_superfamily,_and_Carbon-nitrogen_hydrolase


id: CL:4521
description: Mostly uncharacterized, incl. Ami_2, and Acetylxylan esterase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4521_Mostly_uncharacterized,_incl._Ami_2,_and_Acetylxylan_esterase_activity


id: CL:4523
description: Mixed, incl. Acetylxylan esterase activity, and SGNH hydrolase-type esterase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4523_Mixed,_incl._Acetylxylan_esterase_activity,_and_SGNH_hydrolase-type_esterase_domain


id: CL:4546
description: Mostly uncharacterized, incl. HDIG domain, and DUF218 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4546_Mostly_uncharacterized,_incl._HDIG_domain,_and_DUF218_domain


id: CL:4548
description: Mixed, incl. DUF218 domain, and Protein export
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4548_Mixed,_incl._DUF218_domain,_and_Protein_export


id: CL:4568
description: Mixed, incl. Nucleotide-diphospho-sugar transferases, and O-Antigen nucleotide sugar biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4568_Mixed,_incl._Nucleotide-diphospho-sugar_transferases,_and_O-Antigen_nucleotide_sugar_biosynthesis


id: CL:4569
description: Mixed, incl. Nucleotide-diphospho-sugar transferases, and O-Antigen nucleotide sugar biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4569_Mixed,_incl._Nucleotide-diphospho-sugar_transferases,_and_O-Antigen_nucleotide_sugar_biosynthesis


id: CL:4570
description: Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and Nucleotide-diphospho-sugar transferases
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4570_Mixed,_incl._O-Antigen_nucleotide_sugar_biosynthesis,_and_Nucleotide-diphospho-sugar_transferases


id: CL:4571
description: Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and Nucleotide-diphospho-sugar transferases
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4571_Mixed,_incl._O-Antigen_nucleotide_sugar_biosynthesis,_and_Nucleotide-diphospho-sugar_transferases


id: CL:4572
description: Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and Glycosyl transferase, family 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4572_Mixed,_incl._O-Antigen_nucleotide_sugar_biosynthesis,_and_Glycosyl_transferase,_family_1


id: CL:4573
description: Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and Polysaccharide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4573_Mixed,_incl._O-Antigen_nucleotide_sugar_biosynthesis,_and_Polysaccharide_biosynthetic_process


id: CL:4574
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4574_Mixed,_incl._Polysaccharide_biosynthetic_process,_and_Glycosyltransferase_subfamily_4-like,_N-terminal_domain

description:
  Mixed, incl. Polysaccharide biosynthetic process, and Glycosyltransferase subfamily 4-like, N-terminal domain


id: CL:4576
description: Polysaccharide biosynthetic process, and Polysaccharide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4576_Polysaccharide_biosynthetic_process,_and_Polysaccharide_transport


id: CL:4577
description: Mixed, incl. Peptidyl-tyrosine modification, and Polysaccharide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4577_Mixed,_incl._Peptidyl-tyrosine_modification,_and_Polysaccharide_transport


id: CL:4578
description: Mixed, incl. Peptidyl-tyrosine modification, and Polysaccharide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4578_Mixed,_incl._Peptidyl-tyrosine_modification,_and_Polysaccharide_transport


id: CL:4581
description: Peptidyl-tyrosine modification, and Polysaccharide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4581_Peptidyl-tyrosine_modification,_and_Polysaccharide_transport


id: CL:4605
description: WxcM-like, C-terminal , and Polysaccharide biosynthesis protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4605_WxcM-like,_C-terminal_,_and_Polysaccharide_biosynthesis_protein


id: CL:4616
description: Mixed, incl. Cytidyltransferase-like domain, and Glycosyltransferase Family 4
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4616_Mixed,_incl._Cytidyltransferase-like_domain,_and_Glycosyltransferase_Family_4


id: CL:462
description: Clp ATPase, C-terminal, and ATP-dependent peptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:462_Clp_ATPase,_C-terminal,_and_ATP-dependent_peptidase_activity


id: CL:4627
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4627_Mixed,_incl._Glycosyltransferase_subfamily_4-like,_N-terminal_domain,_and_Glycosyltransferase_like_family_2

description:
  Mixed, incl. Glycosyltransferase subfamily 4-like, N-terminal domain, and Glycosyltransferase like family 2


id: CL:4629
description: Glycosyltransferase subfamily 4-like, N-terminal domain, and Glycosyl transferase, family 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4629_Glycosyltransferase_subfamily_4-like,_N-terminal_domain,_and_Glycosyl_transferase,_family_1


id: CL:4641
description: Mixed, incl. Polysaccharide biosynthesis protein, and Polysaccharide biosynthesis protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4641_Mixed,_incl._Polysaccharide_biosynthesis_protein,_and_Polysaccharide_biosynthesis_protein


id: CL:4655
description: Mixed, incl. Nucleotide-sugar metabolic process, and Steroid biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4655_Mixed,_incl._Nucleotide-sugar_metabolic_process,_and_Steroid_biosynthetic_process


id: CL:4657
description: Polyketide sugar unit biosynthesis, and UDP binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4657_Polyketide_sugar_unit_biosynthesis,_and_UDP_binding_domain


id: CL:4675
description: NADP+ binding, and FAD/NAD(P)-binding domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4675_NADP+_binding,_and_FAD/NAD(P)-binding_domain_superfamily


id: CL:4688
description: Mixed, incl. Nucleotidyl transferase domain, and Alpha-D-phosphohexomutase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4688_Mixed,_incl._Nucleotidyl_transferase_domain,_and_Alpha-D-phosphohexomutase_superfamily


id: CL:4689
description: Nucleotidyl transferase domain, and Alpha-D-phosphohexomutase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4689_Nucleotidyl_transferase_domain,_and_Alpha-D-phosphohexomutase_superfamily


id: CL:4698
description: Glycosyltransferase like family 2, and Glycosyltransferase Family 4
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4698_Glycosyltransferase_like_family_2,_and_Glycosyltransferase_Family_4


id: CL:4708
description: Mixed, incl. Glycosyltransferase like family 2, and Glycosyl transferase, family 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4708_Mixed,_incl._Glycosyltransferase_like_family_2,_and_Glycosyl_transferase,_family_1


id: CL:4711
description: Glycosyltransferase like family 2, and Glycosyl transferase, family 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4711_Glycosyltransferase_like_family_2,_and_Glycosyl_transferase,_family_1


id: CL:4712
description: Galactoside O-acetyltransferase LacA-like, and Glycosyl transferase, family 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4712_Galactoside_O-acetyltransferase_LacA-like,_and_Glycosyl_transferase,_family_1


id: CL:4721
description: Glycosyltransferase like family 2, and Hexapeptide repeat of succinyl-transferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4721_Glycosyltransferase_like_family_2,_and_Hexapeptide_repeat_of_succinyl-transferase


id: CL:4736
description: Mixed, incl. PglD, N-terminal, and DegT/DnrJ/EryC1/StrS aminotransferase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4736_Mixed,_incl._PglD,_N-terminal,_and_DegT/DnrJ/EryC1/StrS_aminotransferase_family


id: CL:4750
description: Mixed, incl. Other types of O-glycan biosynthesis, and Tetratricopeptide repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4750_Mixed,_incl._Other_types_of_O-glycan_biosynthesis,_and_Tetratricopeptide_repeat


id: CL:4761
description: Mixed, incl. NlpC/P60 family, and NodB homology domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4761_Mixed,_incl._NlpC/P60_family,_and_NodB_homology_domain


id: CL:4776
description: Mixed, incl. Galactose metabolic process, and Inositol phosphate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4776_Mixed,_incl._Galactose_metabolic_process,_and_Inositol_phosphate_metabolism


id: CL:4777
description: Mixed, incl. Inositol phosphate metabolism, and ANK repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4777_Mixed,_incl._Inositol_phosphate_metabolism,_and_ANK_repeat


id: CL:4779
description: Mixed, incl. ANK repeat, and DNA methylation on adenine
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4779_Mixed,_incl._ANK_repeat,_and_DNA_methylation_on_adenine


id: CL:4798
description: Galactose metabolic process, and Aldose 1-epimerase
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4798_Galactose_metabolic_process,_and_Aldose_1-epimerase


id: CL:4811
description: Mixed, incl. TerD domain, and Von Willebrand factor, type A
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4811_Mixed,_incl._TerD_domain,_and_Von_Willebrand_factor,_type_A


id: CL:4814
description: Mixed, incl. TerD domain, and Tellurite resistance, TerY
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4814_Mixed,_incl._TerD_domain,_and_Tellurite_resistance,_TerY


id: CL:4816
description: TerD domain, and Tellurite resistance, TerY
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4816_TerD_domain,_and_Tellurite_resistance,_TerY


id: CL:4818
description: Von Willebrand factor, type A, and Protein dephosphorylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4818_Von_Willebrand_factor,_type_A,_and_Protein_dephosphorylation


id: CL:484
description: Response to reactive oxygen species, and Thioredoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:484_Response_to_reactive_oxygen_species,_and_Thioredoxin


id: CL:4857
description: Mixed, incl. EamA domain, and Dimeric alpha-beta barrel
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4857_Mixed,_incl._EamA_domain,_and_Dimeric_alpha-beta_barrel


id: CL:4859
description: EamA-like transporter family, and Helix_turn_helix gluconate operon transcriptional repressor
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4859_EamA-like_transporter_family,_and_Helix_turn_helix_gluconate_operon_transcriptional_repressor


id: CL:4874
description: Mixed, incl. Nicastrin, and YCII-related
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4874_Mixed,_incl._Nicastrin,_and_YCII-related


id: CL:4887
description: Mixed, incl. Thiamine metabolic process, and YARHG domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4887_Mixed,_incl._Thiamine_metabolic_process,_and_YARHG_domain


id: CL:4889
description: Mixed, incl. YARHG domain, and Predicted membrane protein (DUF2306)
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4889_Mixed,_incl._YARHG_domain,_and_Predicted_membrane_protein_(DUF2306)


id: CL:4917
description: Mixed, incl. beta-Lactam resistance, and Transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4917_Mixed,_incl._beta-Lactam_resistance,_and_Transport


id: CL:4918
description: Mixed, incl. beta-Lactam resistance, and Transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4918_Mixed,_incl._beta-Lactam_resistance,_and_Transport


id: CL:4919
description: Mostly uncharacterized, incl. Secretion, and Bacterial secretion system
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4919_Mostly_uncharacterized,_incl._Secretion,_and_Bacterial_secretion_system


id: CL:4920
description: Mostly uncharacterized, incl. Secretion, and Bacterial secretion system
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4920_Mostly_uncharacterized,_incl._Secretion,_and_Bacterial_secretion_system


id: CL:4921
description: Mostly uncharacterized, incl. Secretion, and DNA integration
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4921_Mostly_uncharacterized,_incl._Secretion,_and_DNA_integration


id: CL:4922
description: Mostly uncharacterized, incl. Secretion, and DNA integration
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4922_Mostly_uncharacterized,_incl._Secretion,_and_DNA_integration


id: CL:4923
description: Mostly uncharacterized, incl. Secretion, and Type VI secretion system TssO
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4923_Mostly_uncharacterized,_incl._Secretion,_and_Type_VI_secretion_system_TssO


id: CL:4925
description: Mixed, incl. Secretion, and Hemolysin coregulated protein (Hcp) TssD
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4925_Mixed,_incl._Secretion,_and_Hemolysin_coregulated_protein_(Hcp)_TssD


id: CL:4927
description: Mixed, incl. Secretion, and Hemolysin coregulated protein (Hcp) TssD
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4927_Mixed,_incl._Secretion,_and_Hemolysin_coregulated_protein_(Hcp)_TssD


id: CL:4931
description: Hemolysin coregulated protein (Hcp) TssD, and Secretion
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4931_Hemolysin_coregulated_protein_(Hcp)_TssD,_and_Secretion


id: CL:4933
description: Mixed, incl. Hemolysin coregulated protein (Hcp) TssD, and PKD domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4933_Mixed,_incl._Hemolysin_coregulated_protein_(Hcp)_TssD,_and_PKD_domain


id: CL:4975
description: Mixed, incl. Type VI secretion system TssO, and Von Willebrand factor (vWF) type A domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4975_Mixed,_incl._Type_VI_secretion_system_TssO,_and_Von_Willebrand_factor_(vWF)_type_A_domain


id: CL:4988
description: Mixed, incl. Sodium/solute symporter, and Domain of unknown function DUF6438
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:4988_Mixed,_incl._Sodium/solute_symporter,_and_Domain_of_unknown_function_DUF6438


id: CL:5003
description: Mixed, incl. Protein of unknown function DUF4280, and Porin activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5003_Mixed,_incl._Protein_of_unknown_function_DUF4280,_and_Porin_activity


id: CL:5014
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5014_Mixed,_incl._Biological_process_involved_in_interspecies_interaction_between_organisms,_and_Purine_metabolism

description:
  Mixed, incl. Biological process involved in interspecies interaction between organisms, and Purine metabolism


id: CL:5016
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5016_Mostly_uncharacterized,_incl._Biological_process_involved_in_interspecies_interaction_between_organisms,_and_Leucine-rich_repeat_domain_superfamily

description:
  Mostly uncharacterized, incl. Biological process involved in interspecies interaction between organisms, and Leucine-rich repeat domain superfamily


id: CL:5018
description: Mostly uncharacterized, incl. Viral process, and Endonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5018_Mostly_uncharacterized,_incl._Viral_process,_and_Endonuclease_activity


id: CL:5055
description: Mixed, incl. SH3-like domain, bacterial-type, and tryptophan-tRNA ligase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5055_Mixed,_incl._SH3-like_domain,_bacterial-type,_and_tryptophan-tRNA_ligase_activity


id: CL:5069
description: Mostly uncharacterized, incl. Aspartic peptidase domain superfamily, and Transposase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5069_Mostly_uncharacterized,_incl._Aspartic_peptidase_domain_superfamily,_and_Transposase_activity


id: CL:507
description: Histone-like DNA-binding protein, and LacI-type HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:507_Histone-like_DNA-binding_protein,_and_LacI-type_HTH_domain


id: CL:5070
description: Mixed, incl. Aspartic peptidase domain superfamily, and Transposase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5070_Mixed,_incl._Aspartic_peptidase_domain_superfamily,_and_Transposase_activity


id: CL:5072
description: Mixed, incl. Serine aminopeptidase, S33, and Protein of unknown function DUF4870
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5072_Mixed,_incl._Serine_aminopeptidase,_S33,_and_Protein_of_unknown_function_DUF4870


id: CL:5088
description: Mixed, incl. Transposase activity, and Aspartyl protease
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5088_Mixed,_incl._Transposase_activity,_and_Aspartyl_protease


id: CL:5097
description: Mixed, incl. Glycosyltransferase RgtA/B/C/D-like, and Predicted membrane protein (DUF2306)
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5097_Mixed,_incl._Glycosyltransferase_RgtA/B/C/D-like,_and_Predicted_membrane_protein_(DUF2306)


id: CL:5110
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5110_Mixed,_incl._Outer_membrane_efflux_protein,_and_RND_efflux_pump,_membrane_fusion_protein,_barrel-sandwich_domain

description:
  Mixed, incl. Outer membrane efflux protein, and RND efflux pump, membrane fusion protein, barrel-sandwich domain


id: CL:5111
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5111_Mixed,_incl._Outer_membrane_efflux_protein,_and_RND_efflux_pump,_membrane_fusion_protein,_barrel-sandwich_domain

description:
  Mixed, incl. Outer membrane efflux protein, and RND efflux pump, membrane fusion protein, barrel-sandwich domain


id: CL:5113
description: Mixed, incl. Outer membrane efflux protein, and RND efflux pump, membrane fusion protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5113_Mixed,_incl._Outer_membrane_efflux_protein,_and_RND_efflux_pump,_membrane_fusion_protein


id: CL:5115
description: Outer membrane efflux protein, and MMPL family
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5115_Outer_membrane_efflux_protein,_and_MMPL_family


id: CL:5117
description: Palmitate, and Hydrophobe/amphiphile efflux-1 HAE1
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5117_Palmitate,_and_Hydrophobe/amphiphile_efflux-1_HAE1


id: CL:5133
description: Outer membrane efflux protein, and Sterol-sensing domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5133_Outer_membrane_efflux_protein,_and_Sterol-sensing_domain


id: CL:5150
description: MacB-like periplasmic core domain, and MacB, ATP-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5150_MacB-like_periplasmic_core_domain,_and_MacB,_ATP-binding_domain


id: CL:5151
description: MacB, ATP-binding domain, and MacB-like periplasmic core domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5151_MacB,_ATP-binding_domain,_and_MacB-like_periplasmic_core_domain


id: CL:516
description: Catalytic activity, acting on DNA, and Nucleoid
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:516_Catalytic_activity,_acting_on_DNA,_and_Nucleoid


id: CL:5160
description: FtsX-like permease family, and MacB, ATP-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5160_FtsX-like_permease_family,_and_MacB,_ATP-binding_domain


id: CL:517
description: Catalytic activity, acting on DNA, and Bacterial nucleoid
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:517_Catalytic_activity,_acting_on_DNA,_and_Bacterial_nucleoid


id: CL:5179
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5179_Mixed,_incl._Barrel-sandwich_domain_of_CusB_or_HlyD_membrane-fusion,_and_Prevention_of_phagosomal-lysosomal_fusion

description:
  Mixed, incl. Barrel-sandwich domain of CusB or HlyD membrane-fusion, and Prevention of phagosomal-lysosomal fusion


id: CL:518
description: DNA replication, and ATP-dependent activity, acting on DNA
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:518_DNA_replication,_and_ATP-dependent_activity,_acting_on_DNA


id: CL:5181
description: Mixed, incl. Cation efflux system protein CusB, domain 1, and AraC-like ligand binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5181_Mixed,_incl._Cation_efflux_system_protein_CusB,_domain_1,_and_AraC-like_ligand_binding_domain


id: CL:5196
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5196_Mixed,_incl._Barrel-sandwich_domain_of_CusB_or_HlyD_membrane-fusion,_and_Tetracyclin_repressor-like,_C-terminal_domain_superfamily

description:
  Mixed, incl. Barrel-sandwich domain of CusB or HlyD membrane-fusion, and Tetracyclin repressor-like, C-terminal domain superfamily


id: CL:520
description: Helicase activity, and RNA-DNA hybrid ribonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:520_Helicase_activity,_and_RNA-DNA_hybrid_ribonuclease_activity


id: CL:5206
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5206_Mixed,_incl._X-Pro_dipeptidyl-peptidase_C-terminal_non-catalytic_domain,_and_Type_1_protein_exporter

description:
  Mixed, incl. X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain, and Type 1 protein exporter


id: CL:5208
description: Mixed, incl. Type 1 protein exporter, and Thioredoxin-like fold
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5208_Mixed,_incl._Type_1_protein_exporter,_and_Thioredoxin-like_fold


id: CL:522
description: Mixed, incl. Bacterial nucleoid, and DNA topoisomerase, type IA
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:522_Mixed,_incl._Bacterial_nucleoid,_and_DNA_topoisomerase,_type_IA


id: CL:5225
description: Mixed, incl. Chloride channel, core, and Sigma factor activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5225_Mixed,_incl._Chloride_channel,_core,_and_Sigma_factor_activity


id: CL:524
description: Mixed, incl. HRDC domain, and DNA helicase, UvrD/REP type
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:524_Mixed,_incl._HRDC_domain,_and_DNA_helicase,_UvrD/REP_type


id: CL:5240
description: Mostly uncharacterized, incl. Rare lipoprotein A, and Chromosome partition
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5240_Mostly_uncharacterized,_incl._Rare_lipoprotein_A,_and_Chromosome_partition


id: CL:5241
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5241_Mostly_uncharacterized,_incl._Ig-like_domain_CHU_C_associated,_and_Putative_MetA-pathway_of_phenol_degradation

description:
  Mostly uncharacterized, incl. Ig-like domain CHU_C associated, and Putative MetA-pathway of phenol degradation


id: CL:5243
description: Mixed, incl. Putative MetA-pathway of phenol degradation, and Parallel beta-helix repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5243_Mixed,_incl._Putative_MetA-pathway_of_phenol_degradation,_and_Parallel_beta-helix_repeat


id: CL:5257
description: Mixed, incl. Ig-like domain CHU_C associated, and Sequence-specific DNA binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5257_Mixed,_incl._Ig-like_domain_CHU_C_associated,_and_Sequence-specific_DNA_binding


id: CL:5270
description: Mixed, incl. Rare lipoprotein A, and Chromosome partition
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5270_Mixed,_incl._Rare_lipoprotein_A,_and_Chromosome_partition


id: CL:5283
description: Mixed, incl. Carbohydrate metabolic process, and Pentose and glucuronate interconversions
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5283_Mixed,_incl._Carbohydrate_metabolic_process,_and_Pentose_and_glucuronate_interconversions


id: CL:5284
description: Mixed, incl. Glycosidase, and Pentose and glucuronate interconversions
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5284_Mixed,_incl._Glycosidase,_and_Pentose_and_glucuronate_interconversions


id: CL:5286
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5286_Mixed,_incl._Pentose_and_glucuronate_interconversions,_and_Hydrolase_activity,_hydrolyzing_O-glycosyl_compounds

description:
  Mixed, incl. Pentose and glucuronate interconversions, and Hydrolase activity, hydrolyzing O-glycosyl compounds


id: CL:5287
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5287_Mixed,_incl._Pentose_and_glucuronate_interconversions,_and_Hydrolase_activity,_hydrolyzing_O-glycosyl_compounds

description:
  Mixed, incl. Pentose and glucuronate interconversions, and Hydrolase activity, hydrolyzing O-glycosyl compounds


id: CL:5288
description: Mixed, incl. Glycosidase, and Pentose and glucuronate interconversions
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5288_Mixed,_incl._Glycosidase,_and_Pentose_and_glucuronate_interconversions


id: CL:5289
description: Mixed, incl. Glycoside hydrolase, family 43, and Xylan degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5289_Mixed,_incl._Glycoside_hydrolase,_family_43,_and_Xylan_degradation


id: CL:5291
description: Mixed, incl. Glycoside hydrolase, family 43, and Xylan degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5291_Mixed,_incl._Glycoside_hydrolase,_family_43,_and_Xylan_degradation


id: CL:5293
description: Mixed, incl. Glycoside hydrolase, family 43, and Glycosyl hydrolase family 115
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5293_Mixed,_incl._Glycoside_hydrolase,_family_43,_and_Glycosyl_hydrolase_family_115


id: CL:5294
description: Mixed, incl. Xylanase activity, and Sialate O-acetylesterase
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5294_Mixed,_incl._Xylanase_activity,_and_Sialate_O-acetylesterase


id: CL:5307
description: Glycoside hydrolase, family 43, and Glycosyl hydrolase family 115
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5307_Glycoside_hydrolase,_family_43,_and_Glycosyl_hydrolase_family_115


id: CL:5321
description: Xylan catabolic process, and Sialate O-acetylesterase
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5321_Xylan_catabolic_process,_and_Sialate_O-acetylesterase


id: CL:5332
description: Arabinose metabolic process, and Class II aldolase/adducin N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5332_Arabinose_metabolic_process,_and_Class_II_aldolase/adducin_N-terminal


id: CL:5347
description: Pectin lyase fold, and Six-hairpin glycosidase-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5347_Pectin_lyase_fold,_and_Six-hairpin_glycosidase-like_superfamily


id: CL:5350
description: Pectin lyase fold, and Rhamnogalacturonan acetylesterase RhgT-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5350_Pectin_lyase_fold,_and_Rhamnogalacturonan_acetylesterase_RhgT-like


id: CL:5351
description: Mixed, incl. Pectate lyase superfamily protein, and Aspartyl esterase
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5351_Mixed,_incl._Pectate_lyase_superfamily_protein,_and_Aspartyl_esterase


id: CL:5362
description: Mixed, incl. Aspartyl esterase, and Pectate lyase superfamily protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5362_Mixed,_incl._Aspartyl_esterase,_and_Pectate_lyase_superfamily_protein


id: CL:5379
description: Mixed, incl. Glycosyl hydrolases family 2, sugar binding domain, and Glycosyl Hydrolase Family 88
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5379_Mixed,_incl._Glycosyl_hydrolases_family_2,_sugar_binding_domain,_and_Glycosyl_Hydrolase_Family_88


id: CL:5397
description: Mixed, incl. Pentose and glucuronate interconversions, and KDPG/KHG aldolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5397_Mixed,_incl._Pentose_and_glucuronate_interconversions,_and_KDPG/KHG_aldolase


id: CL:5398
description: Mixed, incl. Glucuronate catabolic process, and KDPG/KHG aldolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5398_Mixed,_incl._Glucuronate_catabolic_process,_and_KDPG/KHG_aldolase


id: CL:5401
description: Mixed, incl. KDPG/KHG aldolase, and Polyol catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5401_Mixed,_incl._KDPG/KHG_aldolase,_and_Polyol_catabolic_process


id: CL:5421
description: Mixed, incl. Glucuronate catabolic process, and KDPG/KHG aldolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5421_Mixed,_incl._Glucuronate_catabolic_process,_and_KDPG/KHG_aldolase


id: CL:5422
description: Mixed, incl. Glucuronate catabolic process, and KDPG/KHG aldolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5422_Mixed,_incl._Glucuronate_catabolic_process,_and_KDPG/KHG_aldolase


id: CL:5435
description: Mixed, incl. Carbohydrate kinase, FGGY, and AraR-like, winged helix DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5435_Mixed,_incl._Carbohydrate_kinase,_FGGY,_and_AraR-like,_winged_helix_DNA-binding_domain


id: CL:5445
description: Mixed, incl. Kelch-type beta propeller, and Protein of unknown function DUF4270
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5445_Mixed,_incl._Kelch-type_beta_propeller,_and_Protein_of_unknown_function_DUF4270


id: CL:5447
description: Mixed, incl. Class II aldolase/adducin N-terminal, and Carbohydrate kinase, FGGY, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5447_Mixed,_incl._Class_II_aldolase/adducin_N-terminal,_and_Carbohydrate_kinase,_FGGY,_N-terminal


id: CL:5472
description: Glycoside hydrolase family 3 C-terminal domain, and Glycoside hydrolase, family 5
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5472_Glycoside_hydrolase_family_3_C-terminal_domain,_and_Glycoside_hydrolase,_family_5


id: CL:5474
description: Glycoside hydrolase family 3 C-terminal domain, and Glycoside hydrolase, family 5
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5474_Glycoside_hydrolase_family_3_C-terminal_domain,_and_Glycoside_hydrolase,_family_5


id: CL:5475
description: Fibronectin type III-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5475_Fibronectin_type_III-like_domain


id: CL:5486
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5486_Glycosyl_hydrolase_family_3_C-terminal_domain,_and_Hydrolase_activity,_hydrolyzing_N-glycosyl_compounds

description:
  Glycosyl hydrolase family 3 C-terminal domain, and Hydrolase activity, hydrolyzing N-glycosyl compounds


id: CL:5503
description: Mixed, incl. Quorum sensing, and Potassium ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5503_Mixed,_incl._Quorum_sensing,_and_Potassium_ion_transport


id: CL:5504
description: Mixed, incl. Rhs repeat-associated core, and Potassium ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5504_Mixed,_incl._Rhs_repeat-associated_core,_and_Potassium_ion_transport


id: CL:5505
description: Mixed, incl. Rhs repeat-associated core, and Protein of unknown function DUF5977
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5505_Mixed,_incl._Rhs_repeat-associated_core,_and_Protein_of_unknown_function_DUF5977


id: CL:5507
description: Mixed, incl. Rhs repeat-associated core, and Protein of unknown function DUF5977
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5507_Mixed,_incl._Rhs_repeat-associated_core,_and_Protein_of_unknown_function_DUF5977


id: CL:5510
description: Rhs repeat-associated core, and Protein of unknown function DUF5977
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5510_Rhs_repeat-associated_core,_and_Protein_of_unknown_function_DUF5977


id: CL:5525
description: Mixed, incl. Lamin tail domain superfamily, and Tetratricopeptide-like helical domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5525_Mixed,_incl._Lamin_tail_domain_superfamily,_and_Tetratricopeptide-like_helical_domain_superfamily


id: CL:5537
description: Mostly uncharacterized, incl. Calcium ion binding, and Beta-glucuronidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5537_Mostly_uncharacterized,_incl._Calcium_ion_binding,_and_Beta-glucuronidase_activity


id: CL:5540
description: Mixed, incl. Calcium ion binding, and Beta-glucuronidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5540_Mixed,_incl._Calcium_ion_binding,_and_Beta-glucuronidase_activity


id: CL:556
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:556_DNA_polymerase_III_complex,_and_Exonuclease_domain_in_DNA-polymerase_alpha_and_epsilon_chain,_ribonuclease_T_and_other_exonucleases

description:
  DNA polymerase III complex, and Exonuclease domain in DNA-polymerase alpha and epsilon chain, ribonuclease T and other exonucleases


id: CL:5562
description: Mixed, incl. Flavodoxin-like fold, and Peptidase M3A/M3B
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5562_Mixed,_incl._Flavodoxin-like_fold,_and_Peptidase_M3A/M3B


id: CL:5563
description: Mixed, incl. Transcription regulator HTH, LysR, and Monooxygenase
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5563_Mixed,_incl._Transcription_regulator_HTH,_LysR,_and_Monooxygenase


id: CL:5574
description: Glutathione-regulated potassium-efflux system ancillary protein KefG/KefF, and Peptidase M3A/M3B
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5574_Glutathione-regulated_potassium-efflux_system_ancillary_protein_KefG/KefF,_and_Peptidase_M3A/M3B


id: CL:5583
description: Mostly uncharacterized, incl. DoxX-like family, and Armadillo-type fold
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5583_Mostly_uncharacterized,_incl._DoxX-like_family,_and_Armadillo-type_fold


id: CL:5584
description: Mostly uncharacterized, incl. Armadillo-type fold, and Acetyltransferase (GNAT) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5584_Mostly_uncharacterized,_incl._Armadillo-type_fold,_and_Acetyltransferase_(GNAT)_domain


id: CL:5586
description: Mixed, incl. Cyclic nucleotide-monophosphate binding domain, and KR domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5586_Mixed,_incl._Cyclic_nucleotide-monophosphate_binding_domain,_and_KR_domain


id: CL:5600
description: Mixed, incl. Acetyltransferase (GNAT) domain, and SnoaL-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5600_Mixed,_incl._Acetyltransferase_(GNAT)_domain,_and_SnoaL-like_domain


id: CL:5612
description: Mixed, incl. DoxX-like family, and Haem-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5612_Mixed,_incl._DoxX-like_family,_and_Haem-binding_domain


id: CL:5630
description: Mixed, incl. Oxidoreductase activity, and Glyoxalase/fosfomycin resistance/dioxygenase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5630_Mixed,_incl._Oxidoreductase_activity,_and_Glyoxalase/fosfomycin_resistance/dioxygenase_domain


id: CL:5631
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5631_Mixed,_incl._Microbial_metabolism_in_diverse_environments,_and_Glyoxalase/fosfomycin_resistance/dioxygenase_domain

description:
  Mixed, incl. Microbial metabolism in diverse environments, and Glyoxalase/fosfomycin resistance/dioxygenase domain


id: CL:5632
description: Mixed, incl. Alpha/Beta hydrolase fold, and RmlC-like jelly roll fold
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5632_Mixed,_incl._Alpha/Beta_hydrolase_fold,_and_RmlC-like_jelly_roll_fold


id: CL:5633
description: Mixed, incl. Aldo/keto reductase family, and RmlC-like cupin domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5633_Mixed,_incl._Aldo/keto_reductase_family,_and_RmlC-like_cupin_domain_superfamily


id: CL:5634
description: Mixed, incl. Aldo/keto reductase family, and Degradation of aromatic compounds
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5634_Mixed,_incl._Aldo/keto_reductase_family,_and_Degradation_of_aromatic_compounds


id: CL:5635
description: Mixed, incl. Phospholipase/Carboxylesterase, and AhpD-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5635_Mixed,_incl._Phospholipase/Carboxylesterase,_and_AhpD-like


id: CL:5637
description: AhpD-like, and Xaa-Pro dipeptidyl-peptidase-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5637_AhpD-like,_and_Xaa-Pro_dipeptidyl-peptidase-like_domain


id: CL:5650
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5650_Mixed,_incl._Glyoxalase/fosfomycin_resistance/dioxygenase_domain,_and_Phospholipase/Carboxylesterase

description:
  Mixed, incl. Glyoxalase/fosfomycin resistance/dioxygenase domain, and Phospholipase/Carboxylesterase


id: CL:5663
description: Mixed, incl. DoxX, and Toluene degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5663_Mixed,_incl._DoxX,_and_Toluene_degradation


id: CL:5679
description: Mixed, incl. Transposase activity, and DSBA-like thioredoxin domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5679_Mixed,_incl._Transposase_activity,_and_DSBA-like_thioredoxin_domain


id: CL:5681
description: Mixed, incl. Protein of unknown function DUF1275, and Peroxiredoxin, AhpC-type
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5681_Mixed,_incl._Protein_of_unknown_function_DUF1275,_and_Peroxiredoxin,_AhpC-type


id: CL:5699
description: Mostly uncharacterized, incl. Domain of unknown function DUF2383, and Histidine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5699_Mostly_uncharacterized,_incl._Domain_of_unknown_function_DUF2383,_and_Histidine_metabolism


id: CL:5700
description: Mostly uncharacterized, incl. Domain of unknown function DUF2383, and MetI-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5700_Mostly_uncharacterized,_incl._Domain_of_unknown_function_DUF2383,_and_MetI-like_superfamily


id: CL:5702
description: Mostly uncharacterized, incl. MetI-like superfamily, and C-type lectin fold
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5702_Mostly_uncharacterized,_incl._MetI-like_superfamily,_and_C-type_lectin_fold


id: CL:5704
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5704_Mixed,_incl._Repeats_in_polycystic_kidney_disease_1_(PKD1)_and_other_proteins,_and_Transcription_regulator_HTH-like

description:
  Mixed, incl. Repeats in polycystic kidney disease 1 (PKD1) and other proteins, and Transcription regulator HTH-like


id: CL:5714
description: Mixed, incl. MetI-like superfamily, and C-type lectin fold
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5714_Mixed,_incl._MetI-like_superfamily,_and_C-type_lectin_fold


id: CL:5732
description: Mixed, incl. Surface antigen D15-like, and CarboxypepD_reg-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5732_Mixed,_incl._Surface_antigen_D15-like,_and_CarboxypepD_reg-like_domain


id: CL:5751
description: Mixed, incl. Nitrotoluene degradation, and Glyoxalase/fosfomycin resistance/dioxygenase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5751_Mixed,_incl._Nitrotoluene_degradation,_and_Glyoxalase/fosfomycin_resistance/dioxygenase_domain


id: CL:5752
description: Mixed, incl. Nitrotoluene degradation, and Glyoxalase/fosfomycin resistance/dioxygenase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5752_Mixed,_incl._Nitrotoluene_degradation,_and_Glyoxalase/fosfomycin_resistance/dioxygenase_domain


id: CL:5753
description: Mixed, incl. Nitrotoluene degradation, and Helix-turn-helix domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5753_Mixed,_incl._Nitrotoluene_degradation,_and_Helix-turn-helix_domain


id: CL:5754
description: Mixed, incl. Nitrotoluene degradation, and AF2212/PG0164-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5754_Mixed,_incl._Nitrotoluene_degradation,_and_AF2212/PG0164-like_superfamily


id: CL:5756
description: Mixed, incl. NADH:flavin oxidoreductase / NADH oxidase family, and Naphthalene degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5756_Mixed,_incl._NADH:flavin_oxidoreductase_/_NADH_oxidase_family,_and_Naphthalene_degradation


id: CL:5776
description: Mixed, incl. Quinolinate metabolic process, and Cation/H+ exchanger, CPA1 family, bacteria
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5776_Mixed,_incl._Quinolinate_metabolic_process,_and_Cation/H+_exchanger,_CPA1_family,_bacteria


id: CL:5791
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5791_Mixed,_incl._Styrene_degradation,_and_Glyoxalase/Bleomycin_resistance_protein/Dioxygenase_superfamily

description:
  Mixed, incl. Styrene degradation, and Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily


id: CL:5803
description: Mixed, incl. DinB-like domain, and Unfolded protein binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5803_Mixed,_incl._DinB-like_domain,_and_Unfolded_protein_binding


id: CL:581
description: Mixed, incl. SOS response, and UvrABC system subunit A
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:581_Mixed,_incl._SOS_response,_and_UvrABC_system_subunit_A


id: CL:5812
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5812_Mostly_uncharacterized,_incl._Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen,_incorporation_of_two_atoms_of_oxygen,_and_Biosynthesis_of_various_secondary_metabolites_-_part_2

description:
  Mostly uncharacterized, incl. Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen, and Biosynthesis of various secondary metabolites - part 2


id: CL:5813
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5813_Mostly_uncharacterized,_incl._Biosynthesis_of_various_secondary_metabolites_-_part_2,_and_General_stress_protein,_FMN-binding_split_barrel_domain

description:
  Mostly uncharacterized, incl. Biosynthesis of various secondary metabolites - part 2, and General stress protein, FMN-binding split barrel domain


id: CL:5814
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5814_Mostly_uncharacterized,_incl._Biosynthesis_of_various_secondary_metabolites_-_part_2,_and_General_stress_protein,_FMN-binding_split_barrel_domain

description:
  Mostly uncharacterized, incl. Biosynthesis of various secondary metabolites - part 2, and General stress protein, FMN-binding split barrel domain


id: CL:5815
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5815_Mixed,_incl._Biosynthesis_of_various_secondary_metabolites_-_part_2,_and_General_stress_protein,_FMN-binding_split_barrel_domain

description:
  Mixed, incl. Biosynthesis of various secondary metabolites - part 2, and General stress protein, FMN-binding split barrel domain


id: CL:5817
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5817_Mixed,_incl._Biosynthesis_of_various_secondary_metabolites_-_part_2,_and_General_stress_protein,_FMN-binding_split_barrel_domain

description:
  Mixed, incl. Biosynthesis of various secondary metabolites - part 2, and General stress protein, FMN-binding split barrel domain


id: CL:5831
description: Mixed, incl. Gcn5-related N-acetyltransferase, and NADPH-dependent FMN reductase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5831_Mixed,_incl._Gcn5-related_N-acetyltransferase,_and_NADPH-dependent_FMN_reductase-like


id: CL:5840
description: Mixed, incl. DJ-1/PfpI, and Integration host factor (IHF)-like DNA-binding domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5840_Mixed,_incl._DJ-1/PfpI,_and_Integration_host_factor_(IHF)-like_DNA-binding_domain_superfamily


id: CL:5856
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5856_Mixed,_incl._Transcription_regulators_MarR/SlyA-like,_and_Twin-arginine_translocation_pathway,_signal_sequence

description:
  Mixed, incl. Transcription regulators MarR/SlyA-like, and Twin-arginine translocation pathway, signal sequence


id: CL:5870
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5870_Mixed,_incl._Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen,_incorporation_of_two_atoms_of_oxygen,_and_Methyltransferase_domain

description:
  Mixed, incl. Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen, and Methyltransferase domain


id: CL:5871
description: Mixed, incl. Uracil DNA N-glycosylase activity, and Protein of unknown function DUF6597
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5871_Mixed,_incl._Uracil_DNA_N-glycosylase_activity,_and_Protein_of_unknown_function_DUF6597


id: CL:5873
description: Mixed, incl. Protein of unknown function DUF6597, and YceI-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5873_Mixed,_incl._Protein_of_unknown_function_DUF6597,_and_YceI-like_domain


id: CL:5890
description: Pirin, and Methyltransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5890_Pirin,_and_Methyltransferase_domain


id: CL:5899
description: Mostly uncharacterized, incl. Periplasmic binding protein, and GxxExxY protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5899_Mostly_uncharacterized,_incl._Periplasmic_binding_protein,_and_GxxExxY_protein


id: CL:5902
description: Mixed, incl. Periplasmic binding protein, and GxxExxY protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5902_Mixed,_incl._Periplasmic_binding_protein,_and_GxxExxY_protein


id: CL:5905
description: Mixed, incl. FecCD transport family, and Periplasmic binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5905_Mixed,_incl._FecCD_transport_family,_and_Periplasmic_binding_protein


id: CL:5938
description: Mixed, incl. MotA/TolQ/ExbB proton channel
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5938_Mixed,_incl._MotA/TolQ/ExbB_proton_channel


id: CL:5955
description: Mixed, incl. HDIG domain, and Cytokinetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5955_Mixed,_incl._HDIG_domain,_and_Cytokinetic_process


id: CL:5973
description: Mostly uncharacterized, incl. Polyphosphate kinase activity, and Ion channel activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5973_Mostly_uncharacterized,_incl._Polyphosphate_kinase_activity,_and_Ion_channel_activity


id: CL:5974
description: Mostly uncharacterized, incl. Polyphosphate kinase activity, and Cysteine-type peptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5974_Mostly_uncharacterized,_incl._Polyphosphate_kinase_activity,_and_Cysteine-type_peptidase_activity


id: CL:5975
description: Mostly uncharacterized, incl. Phosphate ion transport, and Sugar (and other) transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5975_Mostly_uncharacterized,_incl._Phosphate_ion_transport,_and_Sugar_(and_other)_transporter


id: CL:5976
description: Mixed, incl. Sugar (and other) transporter, and Protein of unknown function DUF2975
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5976_Mixed,_incl._Sugar_(and_other)_transporter,_and_Protein_of_unknown_function_DUF2975


id: CL:5987
description: Mixed, incl. Phosphate ion transport, and Cation channel activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5987_Mixed,_incl._Phosphate_ion_transport,_and_Cation_channel_activity


id: CL:5998
description: Mixed, incl. Polyphosphate kinase activity, and Cysteine-type peptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:5998_Mixed,_incl._Polyphosphate_kinase_activity,_and_Cysteine-type_peptidase_activity


id: CL:6000
description: Mixed, incl. Polyphosphate kinase activity, and Glycosyl hydrolase family 92
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6000_Mixed,_incl._Polyphosphate_kinase_activity,_and_Glycosyl_hydrolase_family_92


id: CL:6012
description: Mixed, incl. Serine aminopeptidase, S33, and Protein of unknown function DUF1573
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6012_Mixed,_incl._Serine_aminopeptidase,_S33,_and_Protein_of_unknown_function_DUF1573


id: CL:6022
description: Mixed, incl. Bestrophin-like, and Helicase HerA-like C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6022_Mixed,_incl._Bestrophin-like,_and_Helicase_HerA-like_C-terminal


id: CL:6034
description: Mixed, incl. Sigma-70 region 2 , and Ferritin-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6034_Mixed,_incl._Sigma-70_region_2_,_and_Ferritin-like_domain


id: CL:6035
description: Mixed, incl. Sigma-70 region 2 , and Ferritin-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6035_Mixed,_incl._Sigma-70_region_2_,_and_Ferritin-like_domain


id: CL:6036
description: Sigma-70 region 2 , and Ferritin-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6036_Sigma-70_region_2_,_and_Ferritin-like_domain


id: CL:6037
description: Sigma-70, region 4, and Sigma-70, region 4
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6037_Sigma-70,_region_4,_and_Sigma-70,_region_4


id: CL:6048
description: Ferritin-like domain, and Sigma factor antagonist activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6048_Ferritin-like_domain,_and_Sigma_factor_antagonist_activity


id: CL:6058
description: Mixed, incl. Steroid hydroxylase activity, and DCC1-like thiol-disulfide oxidoreductase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6058_Mixed,_incl._Steroid_hydroxylase_activity,_and_DCC1-like_thiol-disulfide_oxidoreductase_family


id: CL:606
description: DNA-directed DNA polymerase, and LexA-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:606_DNA-directed_DNA_polymerase,_and_LexA-like


id: CL:6074
description: Mixed, incl. Exoribonuclease activity, and Six-bladed beta-propeller, TolB-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6074_Mixed,_incl._Exoribonuclease_activity,_and_Six-bladed_beta-propeller,_TolB-like


id: CL:6083
description: Mixed, incl. Base excision repair, and Non-homologous end-joining
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6083_Mixed,_incl._Base_excision_repair,_and_Non-homologous_end-joining


id: CL:6084
description: Mixed, incl. Base excision repair, and Non-homologous end-joining
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6084_Mixed,_incl._Base_excision_repair,_and_Non-homologous_end-joining


id: CL:6085
description: Mixed, incl. Base excision repair, and Non-homologous end-joining
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6085_Mixed,_incl._Base_excision_repair,_and_Non-homologous_end-joining


id: CL:6086
description: Mixed, incl. Base excision repair, and Non-homologous end-joining
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6086_Mixed,_incl._Base_excision_repair,_and_Non-homologous_end-joining


id: CL:6088
description: Mixed, incl. Non-homologous end-joining, and Nucleus
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6088_Mixed,_incl._Non-homologous_end-joining,_and_Nucleus


id: CL:6090
description: Non-homologous end-joining, and Nuclear lumen
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6090_Non-homologous_end-joining,_and_Nuclear_lumen


id: CL:6102
description: Mixed, incl. Endomembrane system, and DNA ligase (ATP) activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6102_Mixed,_incl._Endomembrane_system,_and_DNA_ligase_(ATP)_activity


id: CL:6121
description: Base-excision repair, and Exodeoxyribonuclease III activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6121_Base-excision_repair,_and_Exodeoxyribonuclease_III_activity


id: CL:6137
description: Mixed, incl. BRCT domain, and Phospholipid methyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6137_Mixed,_incl._BRCT_domain,_and_Phospholipid_methyltransferase


id: CL:6147
description: Mixed, incl. Nitronate monooxygenase
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6147_Mixed,_incl._Nitronate_monooxygenase


id: CL:6159
description: Mixed, incl. Methionine transport, and BRCT domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6159_Mixed,_incl._Methionine_transport,_and_BRCT_domain


id: CL:6161
description: Mixed, incl. BRCT domain, and Methionine transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6161_Mixed,_incl._BRCT_domain,_and_Methionine_transport


id: CL:6180
description: Mostly uncharacterized, incl. ArsC family, and NIL domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6180_Mostly_uncharacterized,_incl._ArsC_family,_and_NIL_domain


id: CL:6181
description: Mostly uncharacterized, incl. ArsC family, and NIL domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6181_Mostly_uncharacterized,_incl._ArsC_family,_and_NIL_domain


id: CL:6183
description: Mixed, incl. NIL domain, and YdhG-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6183_Mixed,_incl._NIL_domain,_and_YdhG-like_domain


id: CL:6200
description: Mixed, incl. Cleaved adhesin, and Cytosolic acyl coenzyme A thioester hydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6200_Mixed,_incl._Cleaved_adhesin,_and_Cytosolic_acyl_coenzyme_A_thioester_hydrolase


id: CL:6214
description: Mixed, incl. Ion channel, and Bacterial chemotaxis
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6214_Mixed,_incl._Ion_channel,_and_Bacterial_chemotaxis


id: CL:622
description: Mixed, incl. Protein deacylation, and NadR/Ttd14, AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:622_Mixed,_incl._Protein_deacylation,_and_NadR/Ttd14,_AAA_domain


id: CL:6223
description: Mixed, incl. Iron-sulfur cluster assembly, and Endonuclease/Exonuclease/phosphatase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6223_Mixed,_incl._Iron-sulfur_cluster_assembly,_and_Endonuclease/Exonuclease/phosphatase_family


id: CL:6225
description: Mixed, incl. Iron-sulfur cluster assembly, and Cysteine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6225_Mixed,_incl._Iron-sulfur_cluster_assembly,_and_Cysteine_metabolic_process


id: CL:6228
description: Mixed, incl. SUF system FeS cluster assembly, SufBD, and Cysteine desulfurase
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6228_Mixed,_incl._SUF_system_FeS_cluster_assembly,_SufBD,_and_Cysteine_desulfurase


id: CL:6257
description: Mixed, incl. NifU-like domain, and Methylthiotransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6257_Mixed,_incl._NifU-like_domain,_and_Methylthiotransferase


id: CL:6270
description: Mixed, incl. Beta-lactamase/transpeptidase-like, and HTH domain AraC-type, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6270_Mixed,_incl._Beta-lactamase/transpeptidase-like,_and_HTH_domain_AraC-type,_conserved_site


id: CL:6271
description: Mixed, incl. Beta-lactamase/transpeptidase-like, and HTH domain AraC-type, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6271_Mixed,_incl._Beta-lactamase/transpeptidase-like,_and_HTH_domain_AraC-type,_conserved_site


id: CL:6272
description: Mixed, incl. Beta-lactamase, and HTH domain AraC-type, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6272_Mixed,_incl._Beta-lactamase,_and_HTH_domain_AraC-type,_conserved_site


id: CL:6273
description: Mixed, incl. Beta-lactamase, and HTH domain AraC-type, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6273_Mixed,_incl._Beta-lactamase,_and_HTH_domain_AraC-type,_conserved_site


id: CL:6274
description: Mixed, incl. Beta-lactamase, and Protein of unknown function DUF4870
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6274_Mixed,_incl._Beta-lactamase,_and_Protein_of_unknown_function_DUF4870


id: CL:6276
description: Beta-lactamase, and Protein of unknown function DUF4870
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6276_Beta-lactamase,_and_Protein_of_unknown_function_DUF4870


id: CL:6277
description: Beta-lactamase, and Methyladenine glycosylase
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6277_Beta-lactamase,_and_Methyladenine_glycosylase


id: CL:6279
description: Beta-lactamase, and Protein of unknown function DUF4870
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6279_Beta-lactamase,_and_Protein_of_unknown_function_DUF4870


id: CL:6284
description: Tetratricopeptide repeat, and Beta-lactamase
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6284_Tetratricopeptide_repeat,_and_Beta-lactamase


id: CL:6324
description: Mixed, incl. Transcription regulator Rrf2, and Long-chain fatty acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6324_Mixed,_incl._Transcription_regulator_Rrf2,_and_Long-chain_fatty_acid_metabolic_process


id: CL:634
description: DNA topoisomerase, type IIA-like domain superfamily, and Rhomboid family
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:634_DNA_topoisomerase,_type_IIA-like_domain_superfamily,_and_Rhomboid_family


id: CL:6351
description: Mixed, incl. Bestrophin-like, and Aspartyl protease
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6351_Mixed,_incl._Bestrophin-like,_and_Aspartyl_protease


id: CL:6362
description: Mostly uncharacterized, incl. CDP-alcohol phosphatidyltransferase, and Peptidase M13
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6362_Mostly_uncharacterized,_incl._CDP-alcohol_phosphatidyltransferase,_and_Peptidase_M13


id: CL:6365
description: Mixed, incl. CDP-alcohol phosphatidyltransferase, and Transcription regulator HTH-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6365_Mixed,_incl._CDP-alcohol_phosphatidyltransferase,_and_Transcription_regulator_HTH-like


id: CL:6383
description: Mixed, incl. Carboxypeptidase, and Alpha/beta hydrolase fold-1
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6383_Mixed,_incl._Carboxypeptidase,_and_Alpha/beta_hydrolase_fold-1


id: CL:6385
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6385_Mixed,_incl._D-Ala-D-Ala_carboxypeptidase_3_(S13)_family,_and_tRNA_endonuclease-like_domain_superfamily

description:
  Mixed, incl. D-Ala-D-Ala carboxypeptidase 3 (S13) family, and tRNA endonuclease-like domain superfamily


id: CL:6400
description: Mixed, incl. Nucleoside recognition, and UDP-N-acetylglucosamine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6400_Mixed,_incl._Nucleoside_recognition,_and_UDP-N-acetylglucosamine_metabolic_process


id: CL:6413
description: Mixed, incl. Hypervirulence associated protein, TUDOR domain, and Exodeoxyribonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6413_Mixed,_incl._Hypervirulence_associated_protein,_TUDOR_domain,_and_Exodeoxyribonuclease_activity


id: CL:6429
description: Mostly uncharacterized, incl. Antiporter activity, and Phosphatase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6429_Mostly_uncharacterized,_incl._Antiporter_activity,_and_Phosphatase_activity


id: CL:643
description: Nucleotide biosynthetic process, and Folate biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:643_Nucleotide_biosynthetic_process,_and_Folate_biosynthesis


id: CL:6431
description: Mostly uncharacterized, incl. Ferritin, and Cupin-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6431_Mostly_uncharacterized,_incl._Ferritin,_and_Cupin-like_domain


id: CL:6433
description: Mixed, incl. Ferritin, and NadR/Ttd14, AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6433_Mixed,_incl._Ferritin,_and_NadR/Ttd14,_AAA_domain


id: CL:644
description: Nucleoside monophosphate metabolic process, and Pyrimidine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:644_Nucleoside_monophosphate_metabolic_process,_and_Pyrimidine_metabolism


id: CL:645
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:645_Ribonucleoside_monophosphate_metabolic_process,_and_Pyrimidine_nucleoside_triphosphate_metabolic_process

description:
  Ribonucleoside monophosphate metabolic process, and Pyrimidine nucleoside triphosphate metabolic process


id: CL:6459
description: Mixed, incl. Antiporter activity, and Phosphotyrosine protein phosphatase I superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6459_Mixed,_incl._Antiporter_activity,_and_Phosphotyrosine_protein_phosphatase_I_superfamily


id: CL:646
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:646_Ribonucleoside_monophosphate_metabolic_process,_and_Pyrimidine_ribonucleoside_triphosphate_metabolic_process

description:
  Ribonucleoside monophosphate metabolic process, and Pyrimidine ribonucleoside triphosphate metabolic process


id: CL:6460
description: Mixed, incl. Sodium/calcium exchanger protein, and Six-hairpin glycosidase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6460_Mixed,_incl._Sodium/calcium_exchanger_protein,_and_Six-hairpin_glycosidase_superfamily


id: CL:647
description: Ribonucleoside monophosphate metabolic process, and Nucleoside-triphosphate diphosphatase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:647_Ribonucleoside_monophosphate_metabolic_process,_and_Nucleoside-triphosphate_diphosphatase_activity


id: CL:6471
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6471_Mixed,_incl._Sodium_Bile_acid_symporter_family,_and_Phosphotyrosine_protein_phosphatase_I_superfamily

description:
  Mixed, incl. Sodium Bile acid symporter family, and Phosphotyrosine protein phosphatase I superfamily


id: CL:648
description: De novo IMP biosynthetic process, and De novo UMP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:648_De_novo_IMP_biosynthetic_process,_and_De_novo_UMP_biosynthetic_process


id: CL:6480
description: Mostly uncharacterized, incl. Organelle organization, and Bacterial secretion system
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6480_Mostly_uncharacterized,_incl._Organelle_organization,_and_Bacterial_secretion_system


id: CL:6481
description: Mostly uncharacterized, incl. Organelle organization, and Secretion
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6481_Mostly_uncharacterized,_incl._Organelle_organization,_and_Secretion


id: CL:6482
description: Mostly uncharacterized, incl. Organelle organization, and Secretion
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6482_Mostly_uncharacterized,_incl._Organelle_organization,_and_Secretion


id: CL:6484
description: Mostly uncharacterized, incl. Exodeoxyribonuclease V complex, and YWFCY domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6484_Mostly_uncharacterized,_incl._Exodeoxyribonuclease_V_complex,_and_YWFCY_domain


id: CL:6487
description: Mixed, incl. Exodeoxyribonuclease V complex, and YWFCY domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6487_Mixed,_incl._Exodeoxyribonuclease_V_complex,_and_YWFCY_domain


id: CL:6489
description: Mixed, incl. Exodeoxyribonuclease V complex, and YWFCY domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6489_Mixed,_incl._Exodeoxyribonuclease_V_complex,_and_YWFCY_domain


id: CL:649
description: De novo IMP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:649_De_novo_IMP_biosynthetic_process


id: CL:6491
description: Mixed, incl. TraG, P-loop domain, and Conjugative transposon, TraK
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6491_Mixed,_incl._TraG,_P-loop_domain,_and_Conjugative_transposon,_TraK


id: CL:6493
description: Mixed, incl. Conjugative transposon, TraK, and Conjugative transposon, TraN
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6493_Mixed,_incl._Conjugative_transposon,_TraK,_and_Conjugative_transposon,_TraN


id: CL:651
description: De novo IMP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:651_De_novo_IMP_biosynthetic_process


id: CL:6535
description: Mostly uncharacterized, incl. YWFCY domain, and TraG, P-loop domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6535_Mostly_uncharacterized,_incl._YWFCY_domain,_and_TraG,_P-loop_domain


id: CL:6537
description: Mostly uncharacterized, incl. YWFCY domain, and TraG, P-loop domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6537_Mostly_uncharacterized,_incl._YWFCY_domain,_and_TraG,_P-loop_domain


id: CL:6541
description: Mixed, incl. TraG, P-loop domain, and Conjugative transposon, TraK
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6541_Mixed,_incl._TraG,_P-loop_domain,_and_Conjugative_transposon,_TraK


id: CL:6558
description: Mixed, incl. Domain of unknown function (DUF4133)
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6558_Mixed,_incl._Domain_of_unknown_function_(DUF4133)


id: CL:6586
description: Mixed, incl. Horizontal gene transfer, and 23S rRNA-intervening sequence protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6586_Mixed,_incl._Horizontal_gene_transfer,_and_23S_rRNA-intervening_sequence_protein


id: CL:6588
description: Horizontal gene transfer, and Subunit ChlI of Mg-chelatase
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6588_Horizontal_gene_transfer,_and_Subunit_ChlI_of_Mg-chelatase


id: CL:6604
description: Mixed, incl. Phage/plasmid-like protein, and Single-stranded DNA-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6604_Mixed,_incl._Phage/plasmid-like_protein,_and_Single-stranded_DNA-binding_protein


id: CL:6613
description: Mostly uncharacterized, incl. Recombinational repair, and Transposition, DNA-mediated
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6613_Mostly_uncharacterized,_incl._Recombinational_repair,_and_Transposition,_DNA-mediated


id: CL:6616
description: Mixed, incl. Recombinational repair, and Transposition, DNA-mediated
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6616_Mixed,_incl._Recombinational_repair,_and_Transposition,_DNA-mediated


id: CL:6637
description: Mixed, incl. Hypervirulence associated protein, TUDOR domain, and Glucose/Sorbosone dehydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6637_Mixed,_incl._Hypervirulence_associated_protein,_TUDOR_domain,_and_Glucose/Sorbosone_dehydrogenase


id: CL:6653
description: Mixed, incl. POT family, and Amino acid permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6653_Mixed,_incl._POT_family,_and_Amino_acid_permease


id: CL:6654
description: Mixed, incl. POT family, and ATP-dependent DNA helicase RecG/Transcription-repair-coupling factor
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6654_Mixed,_incl._POT_family,_and_ATP-dependent_DNA_helicase_RecG/Transcription-repair-coupling_factor


id: CL:6655
description: Mixed, incl. POT family, and Amino acid permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6655_Mixed,_incl._POT_family,_and_Amino_acid_permease


id: CL:6668
description: Mixed, incl. POT family, and ATP-dependent DNA helicase RecG/Transcription-repair-coupling factor
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6668_Mixed,_incl._POT_family,_and_ATP-dependent_DNA_helicase_RecG/Transcription-repair-coupling_factor


id: CL:6682
description: Mixed, incl. Sodium:dicarboxylate symporter, and Extrinsic component of plasma membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6682_Mixed,_incl._Sodium:dicarboxylate_symporter,_and_Extrinsic_component_of_plasma_membrane


id: CL:6699
description: Mixed, incl. AsnC-type HTH domain, and Protein of unknown function DUF6759
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6699_Mixed,_incl._AsnC-type_HTH_domain,_and_Protein_of_unknown_function_DUF6759


id: CL:6701
description: Mixed, incl. AsnC-type HTH domain, and PUA-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6701_Mixed,_incl._AsnC-type_HTH_domain,_and_PUA-like_superfamily


id: CL:6703
description: Mixed, incl. Protein of unknown function DUF1572, and FAD dependent oxidoreductase
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6703_Mixed,_incl._Protein_of_unknown_function_DUF1572,_and_FAD_dependent_oxidoreductase


id: CL:6715
description: AsnC-type HTH domain, and Transcription regulator HTH, LysR
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6715_AsnC-type_HTH_domain,_and_Transcription_regulator_HTH,_LysR


id: CL:6730
description: Mixed, incl. HIT-like superfamily, and D-amino acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6730_Mixed,_incl._HIT-like_superfamily,_and_D-amino_acid_metabolic_process


id: CL:6751
description: Mostly uncharacterized, incl. Cro/C1-type helix-turn-helix domain, and Queuosine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6751_Mostly_uncharacterized,_incl._Cro/C1-type_helix-turn-helix_domain,_and_Queuosine_biosynthesis


id: CL:6752
description: Mostly uncharacterized, incl. Cro/C1-type helix-turn-helix domain, and HipA-like, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6752_Mostly_uncharacterized,_incl._Cro/C1-type_helix-turn-helix_domain,_and_HipA-like,_C-terminal


id: CL:6753
description: Mostly uncharacterized, incl. RNA repair pathway DNA polymerase beta, and DoxX
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6753_Mostly_uncharacterized,_incl._RNA_repair_pathway_DNA_polymerase_beta,_and_DoxX


id: CL:6754
description: Mostly uncharacterized, incl. DoxX, and RNA ligase
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6754_Mostly_uncharacterized,_incl._DoxX,_and_RNA_ligase


id: CL:6757
description: Mixed, incl. RNA ligase, and Positive regulation of molecular function
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6757_Mixed,_incl._RNA_ligase,_and_Positive_regulation_of_molecular_function


id: CL:6772
description: Mixed, incl. DoxX, and Antioxidant
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6772_Mixed,_incl._DoxX,_and_Antioxidant


id: CL:6782
description: Mixed, incl. RNA repair pathway DNA polymerase beta, and WYL domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6782_Mixed,_incl._RNA_repair_pathway_DNA_polymerase_beta,_and_WYL_domain


id: CL:6784
description: RNA repair pathway DNA polymerase beta, and WYL domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6784_RNA_repair_pathway_DNA_polymerase_beta,_and_WYL_domain


id: CL:6808
description: Mixed, incl. Cro/C1-type helix-turn-helix domain, and HipA-like, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6808_Mixed,_incl._Cro/C1-type_helix-turn-helix_domain,_and_HipA-like,_C-terminal


id: CL:6809
description: Mixed, incl. Domain of unknown function DUF262, and Helicase superfamily 1/2, ATP-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6809_Mixed,_incl._Domain_of_unknown_function_DUF262,_and_Helicase_superfamily_1/2,_ATP-binding_domain


id: CL:681
description: Purine nucleoside monophosphate metabolic process, and Ribonucleotide catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:681_Purine_nucleoside_monophosphate_metabolic_process,_and_Ribonucleotide_catabolic_process


id: CL:6813
description: Mixed, incl. Domain of unknown function DUF262, and DNA alkylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6813_Mixed,_incl._Domain_of_unknown_function_DUF262,_and_DNA_alkylation


id: CL:683
description: GMP biosynthesis, and 5-nucleotidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:683_GMP_biosynthesis,_and_5-nucleotidase_activity


id: CL:6836
description: Cro/C1-type helix-turn-helix domain, and HipA-like, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6836_Cro/C1-type_helix-turn-helix_domain,_and_HipA-like,_C-terminal


id: CL:6839
description: HipA-like, C-terminal, and Cro/C1-type helix-turn-helix domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6839_HipA-like,_C-terminal,_and_Cro/C1-type_helix-turn-helix_domain


id: CL:6859
description: Mixed, incl. Queuosine biosynthesis, and L,D-transpeptidase catalytic domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6859_Mixed,_incl._Queuosine_biosynthesis,_and_L,D-transpeptidase_catalytic_domain


id: CL:6860
description: Mixed, incl. Queuosine biosynthesis, and Sulfite exporter TauE/SafE
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6860_Mixed,_incl._Queuosine_biosynthesis,_and_Sulfite_exporter_TauE/SafE


id: CL:6861
description: Queuosine biosynthesis, and L,D-transpeptidase catalytic domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6861_Queuosine_biosynthesis,_and_L,D-transpeptidase_catalytic_domain


id: CL:6872
description: Mixed, incl. Sulfite exporter TauE/SafE, and Major Facilitator Superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6872_Mixed,_incl._Sulfite_exporter_TauE/SafE,_and_Major_Facilitator_Superfamily


id: CL:6881
description: Mixed, incl. Peptidase S51, and 2-deoxyribonucleotide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6881_Mixed,_incl._Peptidase_S51,_and_2-deoxyribonucleotide_biosynthetic_process


id: CL:6890
description: Mixed, incl. Activator of Hsp90 ATPase homolog 1-like protein, and Histidine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6890_Mixed,_incl._Activator_of_Hsp90_ATPase_homolog_1-like_protein,_and_Histidine_metabolism


id: CL:6891
description: Mixed, incl. Activator of Hsp90 ATPase homolog 1-like protein, and PhnB-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6891_Mixed,_incl._Activator_of_Hsp90_ATPase_homolog_1-like_protein,_and_PhnB-like


id: CL:6892
description: Mixed, incl. Activator of Hsp90 ATPase homolog 1-like protein, and PhnB-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6892_Mixed,_incl._Activator_of_Hsp90_ATPase_homolog_1-like_protein,_and_PhnB-like


id: CL:6893
description: Mixed, incl. Activator of Hsp90 ATPase homolog 1-like protein, and PhnB-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6893_Mixed,_incl._Activator_of_Hsp90_ATPase_homolog_1-like_protein,_and_PhnB-like


id: CL:6895
description: Activator of Hsp90 ATPase homolog 1-like protein, and PhnB-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6895_Activator_of_Hsp90_ATPase_homolog_1-like_protein,_and_PhnB-like


id: CL:6924
description: Mixed, incl. YdhG-like domain, and YCII-related
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6924_Mixed,_incl._YdhG-like_domain,_and_YCII-related


id: CL:6935
description: Mixed, incl. Polyamine metabolic process, and WYL domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6935_Mixed,_incl._Polyamine_metabolic_process,_and_WYL_domain


id: CL:6950
description: Mixed, incl. Histidine metabolism, and Aromatic amino acid lyase
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6950_Mixed,_incl._Histidine_metabolism,_and_Aromatic_amino_acid_lyase


id: CL:6968
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6968_Mixed,_incl._Photosynthesis_system_II_assembly_factor_YCF48,_and_Aromatic_amino_acid_beta-eliminating_lyase/threonine_aldolase

description:
  Mixed, incl. Photosynthesis system II assembly factor YCF48, and Aromatic amino acid beta-eliminating lyase/threonine aldolase


id: CL:6979
description: Mostly uncharacterized, incl. GNAT domain, and Solute:proton antiporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6979_Mostly_uncharacterized,_incl._GNAT_domain,_and_Solute:proton_antiporter_activity


id: CL:6980
description: Mixed, incl. GNAT domain, and AraC-like ligand binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6980_Mixed,_incl._GNAT_domain,_and_AraC-like_ligand_binding_domain


id: CL:6983
description: Mixed, incl. GNAT domain, and Ami_2
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6983_Mixed,_incl._GNAT_domain,_and_Ami_2


id: CL:6985
description: Mixed, incl. META domain, and Peptidase S46
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:6985_Mixed,_incl._META_domain,_and_Peptidase_S46


id: CL:7016
description: Mostly uncharacterized, incl. Polyamine metabolic process, and Regulation of ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:7016_Mostly_uncharacterized,_incl._Polyamine_metabolic_process,_and_Regulation_of_ion_transport


id: CL:7019
description: AraC-like ligand binding domain, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:7019_AraC-like_ligand_binding_domain,_and_Signal


id: CL:702
description: CTP metabolic process, and Ribonucleoside-diphosphate reductase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:702_CTP_metabolic_process,_and_Ribonucleoside-diphosphate_reductase_complex


id: CL:7034
description: Mixed, incl. Polyamine metabolic process, and Regulation of ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:7034_Mixed,_incl._Polyamine_metabolic_process,_and_Regulation_of_ion_transport


id: CL:7047
description: Mixed, incl. Cation/H+ exchanger, CPA1 family, and Domain of unknown function DUF11
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:7047_Mixed,_incl._Cation/H+_exchanger,_CPA1_family,_and_Domain_of_unknown_function_DUF11


id: CL:7049
description: Mixed, incl. Domain of unknown function DUF11, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:7049_Mixed,_incl._Domain_of_unknown_function_DUF11,_and_Signal


id: CL:7067
description: Mixed, incl. Armadillo-type fold, and Cation/H+ exchanger, CPA1 family
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:7067_Mixed,_incl._Armadillo-type_fold,_and_Cation/H+_exchanger,_CPA1_family


id: CL:7082
description: Mixed, incl. HxlR-like helix-turn-helix, and Ubiquitin-protein transferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:7082_Mixed,_incl._HxlR-like_helix-turn-helix,_and_Ubiquitin-protein_transferase_activity


id: CL:7083
description: Mixed, incl. Ubiquitin-protein transferase activity, and TPM domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:7083_Mixed,_incl._Ubiquitin-protein_transferase_activity,_and_TPM_domain


id: CL:7084
description: Mixed, incl. TPM domain, and MamQ/LemA
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:7084_Mixed,_incl._TPM_domain,_and_MamQ/LemA


id: CL:7095
description: Mixed, incl. Ubiquitin-protein transferase activity, and Ketopantoate reductase PanE/ApbA
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:7095_Mixed,_incl._Ubiquitin-protein_transferase_activity,_and_Ketopantoate_reductase_PanE/ApbA


id: CL:711
description: Folic acid-containing compound metabolic process, and dTTP metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:711_Folic_acid-containing_compound_metabolic_process,_and_dTTP_metabolic_process


id: CL:7119
description: Mixed, incl. Small Multidrug Resistance protein, and Antiporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:7119_Mixed,_incl._Small_Multidrug_Resistance_protein,_and_Antiporter_activity


id: CL:7120
description: Mixed, incl. Small Multidrug Resistance protein, and Phosphotransferase system (PTS)
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:7120_Mixed,_incl._Small_Multidrug_Resistance_protein,_and_Phosphotransferase_system_(PTS)


id: CL:7129
description: Mixed, incl. Methyladenine glycosylase, and Small Multidrug Resistance protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:7129_Mixed,_incl._Methyladenine_glycosylase,_and_Small_Multidrug_Resistance_protein


id: CL:7139
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:7139_Mostly_uncharacterized,_incl._Protein_of_unknown_function_DUF421,_and_Domain_of_unknown_function_(DUF4440)

description:
  Mostly uncharacterized, incl. Protein of unknown function DUF421, and Domain of unknown function (DUF4440)


id: CL:7179
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:7179_Mixed,_incl._Tumour_necrosis_factor-like_domain_superfamily,_and_Ribosomal_protein_S1-like_RNA-binding_domain

description:
  Mixed, incl. Tumour necrosis factor-like domain superfamily, and Ribosomal protein S1-like RNA-binding domain


id: CL:7197
description: Mostly uncharacterized, incl. YARHG domain, and Bacterial SH3 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:7197_Mostly_uncharacterized,_incl._YARHG_domain,_and_Bacterial_SH3_domain


id: CL:7211
description: Mixed, incl. YARHG domain, and Bacterial SH3 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:7211_Mixed,_incl._YARHG_domain,_and_Bacterial_SH3_domain


id: CL:722
description: Mixed, incl. UMP salvage, and Phosphorylase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:722_Mixed,_incl._UMP_salvage,_and_Phosphorylase_superfamily


id: CL:724
description: Phosphorylase superfamily, and Deoxynucleoside kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:724_Phosphorylase_superfamily,_and_Deoxynucleoside_kinase_activity


id: CL:738
description: Mixed, incl. 5-Nucleotidase/apyrase, and Peptidase M48
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:738_Mixed,_incl._5-Nucleotidase/apyrase,_and_Peptidase_M48


id: CL:749
description: Mixed, incl. Pyridine nucleotide metabolic process, and Folate biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:749_Mixed,_incl._Pyridine_nucleotide_metabolic_process,_and_Folate_biosynthesis


id: CL:750
description: Pyridine nucleotide metabolic process, and Phosphoglycolate phosphatase-like, domain 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:750_Pyridine_nucleotide_metabolic_process,_and_Phosphoglycolate_phosphatase-like,_domain_2


id: CL:752
description: Nicotinamide nucleotide metabolic process, and Protein deacylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:752_Nicotinamide_nucleotide_metabolic_process,_and_Protein_deacylation


id: CL:754
description: Nicotinamide nucleotide metabolic process, and Protein deacylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:754_Nicotinamide_nucleotide_metabolic_process,_and_Protein_deacylation


id: CL:787
description: Riboflavin metabolic process, and Cellular modified amino acid biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:787_Riboflavin_metabolic_process,_and_Cellular_modified_amino_acid_biosynthetic_process


id: CL:788
description: Riboflavin metabolic process, and Folate biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:788_Riboflavin_metabolic_process,_and_Folate_biosynthesis


id: CL:813
description: Pantothenate metabolic process, and Coenzyme A biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:813_Pantothenate_metabolic_process,_and_Coenzyme_A_biosynthesis


id: CL:824
description: Mixed, incl. Telomere recombination, and NUDIX hydrolase, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:824_Mixed,_incl._Telomere_recombination,_and_NUDIX_hydrolase,_conserved_site


id: CL:833
description: Mixed, incl. Ribosome binding, and Major facilitator superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:833_Mixed,_incl._Ribosome_binding,_and_Major_facilitator_superfamily


id: CL:835
description: Mixed, incl. Peptidase S46, and Putrescine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:835_Mixed,_incl._Peptidase_S46,_and_Putrescine_metabolic_process


id: CL:84
description: Translation, and ATP metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:84_Translation,_and_ATP_metabolic_process


id: CL:85
description: Translation, and ATP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:85_Translation,_and_ATP_biosynthetic_process


id: CL:854
description: Mixed, incl. TatD related DNase, and RNA 5-end processing
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:854_Mixed,_incl._TatD_related_DNase,_and_RNA_5-end_processing


id: CL:868
description: Mixed, incl. Type 1 protein exporter, and Vitamin B6 metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:868_Mixed,_incl._Type_1_protein_exporter,_and_Vitamin_B6_metabolism


id: CL:869
description: Mixed, incl. Type 1 protein exporter, and Rhodanese-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:869_Mixed,_incl._Type_1_protein_exporter,_and_Rhodanese-like_domain


id: CL:87
description: Translation, and ATP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:87_Translation,_and_ATP_biosynthetic_process


id: CL:871
description: Mixed, incl. Type 1 protein exporter, and Rhodanese-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:871_Mixed,_incl._Type_1_protein_exporter,_and_Rhodanese-like_domain


id: CL:872
description: Mixed, incl. Rhodanese-like domain, and Luciferase-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:872_Mixed,_incl._Rhodanese-like_domain,_and_Luciferase-like_domain


id: CL:875
description: Rhodanese-like domain, and tRNA pseudouridine synthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:875_Rhodanese-like_domain,_and_tRNA_pseudouridine_synthesis


id: CL:896
description: Type 1 protein exporter, and Peptidase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:896_Type_1_protein_exporter,_and_Peptidase_complex


id: CL:90
description: Translation, and ATP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:90_Translation,_and_ATP_biosynthetic_process


id: CL:92
description: Translation, and ATP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:92_Translation,_and_ATP_biosynthetic_process


id: CL:925
description: Mixed, incl. LSM domain superfamily, and Long-chain fatty acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:925_Mixed,_incl._LSM_domain_superfamily,_and_Long-chain_fatty_acid_metabolic_process


id: CL:93
description: Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:93_Ribosome,_and_Translation_regulator_activity


id: CL:948
description: Carbon metabolism, and Valine, leucine and isoleucine degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:948_Carbon_metabolism,_and_Valine,_leucine_and_isoleucine_degradation


id: CL:949
description: Carbon metabolism, and Glutamate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:949_Carbon_metabolism,_and_Glutamate_metabolic_process


id: CL:950
description: Carbon metabolism, and Glutamate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:950_Carbon_metabolism,_and_Glutamate_metabolic_process


id: CL:951
description: Citrate cycle (TCA cycle), and Glutamate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:951_Citrate_cycle_(TCA_cycle),_and_Glutamate_metabolic_process


id: CL:952
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:952_Mixed,_incl._Citrate_cycle_(TCA_cycle),_and_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors

description:
  Mixed, incl. Citrate cycle (TCA cycle), and Oxidoreductase activity, acting on the CH-NH2 group of donors


id: CL:954
description: Citrate cycle (TCA cycle), and Glycine catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:954_Citrate_cycle_(TCA_cycle),_and_Glycine_catabolic_process


id: CL:956
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:956_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_disulfide_as_acceptor,_and_e3_binding_domain

description:
  Oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor, and e3 binding domain


id: CL:97
description: Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:97_Ribosome,_and_Translation_regulator_activity


id: CL:989
description: Glutamate biosynthetic process, and Aminoacid dehydrogenase-like, N-terminal domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1416779_STRINGid_CL:989_Glutamate_biosynthetic_process,_and_Aminoacid_dehydrogenase-like,_N-terminal_domain_superfamily


id: GO:0000701
description: Purine-specific mismatch base pair DNA N-glycosylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0000701
golevel: 6
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0000701_Purine-specific_mismatch_base_pair_DNA_N-glycosylase_activity


id: GO:0000716
description: Transcription-coupled nucleotide-excision repair, DNA damage recognition
memo: https://amigo.geneontology.org/amigo/term/GO:0000716
golevel: 7
name:
  GOBP.STRING_v12.0_1416779_STRINGid_GO:0000716_Transcription-coupled_nucleotide-excision_repair,_DNA_damage_recognition


id: GO:0001073
description: Transcription antitermination factor activity, DNA binding
memo: https://amigo.geneontology.org/amigo/term/GO:0001073
golevel: 2
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0001073_Transcription_antitermination_factor_activity,_DNA_binding


id: GO:0003848
description: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003848
golevel: 5
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0003848_2-amino-4-hydroxy-6-hydroxymethyldihydropteridine_diphosphokinase_activity


id: GO:0003864
description: 3-methyl-2-oxobutanoate hydroxymethyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003864
golevel: 5
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0003864_3-methyl-2-oxobutanoate_hydroxymethyltransferase_activity


id: GO:0003906
description: DNA-(apurinic or apyrimidinic site) endonuclease activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003906
golevel: 6
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0003906_DNA-(apurinic_or_apyrimidinic_site)_endonuclease_activity


id: GO:0003917
description: DNA topoisomerase type I (single strand cut, ATP-independent) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003917
golevel: 5
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0003917_DNA_topoisomerase_type_I_(single_strand_cut,_ATP-independent)_activity


id: GO:0003918
description: DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003918
golevel: 3
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0003918_DNA_topoisomerase_type_II_(double_strand_cut,_ATP-hydrolyzing)_activity


id: GO:0003949
memo: https://amigo.geneontology.org/amigo/term/GO:0003949
golevel: 5
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0003949_1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide_isomerase_activity

description:
  1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity


id: GO:0004018
description: N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004018
golevel: 5
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0004018_N6-(1,2-dicarboxyethyl)AMP_AMP-lyase_(fumarate-forming)_activity


id: GO:0004088
description: Carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004088
golevel: 5
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0004088_Carbamoyl-phosphate_synthase_(glutamine-hydrolyzing)_activity


id: GO:0004149
description: Dihydrolipoyllysine-residue succinyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004149
golevel: 3
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0004149_Dihydrolipoyllysine-residue_succinyltransferase_activity


id: GO:0004317
description: 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004317
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0004317_3-hydroxypalmitoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0004318
description: Enoyl-[acyl-carrier-protein] reductase (NADH) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004318
golevel: 6
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0004318_Enoyl-[acyl-carrier-protein]_reductase_(NADH)_activity


id: GO:0004360
description: glutamine-fructose-6-phosphate transaminase (isomerizing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004360
golevel: 6
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0004360_glutamine-fructose-6-phosphate_transaminase_(isomerizing)_activity


id: GO:0004471
description: Malate dehydrogenase (decarboxylating) (NAD+) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004471
golevel: 5
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0004471_Malate_dehydrogenase_(decarboxylating)_(NAD+)_activity


id: GO:0004486
description: Methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004486
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0004486_Methylenetetrahydrofolate_dehydrogenase_[NAD(P)+]_activity


id: GO:0004488
description: Methylenetetrahydrofolate dehydrogenase (NADP+) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004488
golevel: 5
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0004488_Methylenetetrahydrofolate_dehydrogenase_(NADP+)_activity


id: GO:0004489
description: Methylenetetrahydrofolate reductase (NAD(P)H) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004489
golevel: 5
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0004489_Methylenetetrahydrofolate_reductase_(NAD(P)H)_activity


id: GO:0004514
description: Nicotinate-nucleotide diphosphorylase (carboxylating) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004514
golevel: 5
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0004514_Nicotinate-nucleotide_diphosphorylase_(carboxylating)_activity


id: GO:0004582
description: Dolichyl-phosphate beta-D-mannosyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004582
golevel: 6
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0004582_Dolichyl-phosphate_beta-D-mannosyltransferase_activity


id: GO:0004591
description: Oxoglutarate dehydrogenase (succinyl-transferring) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004591
golevel: 5
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0004591_Oxoglutarate_dehydrogenase_(succinyl-transferring)_activity


id: GO:0004604
description: Phosphoadenylyl-sulfate reductase (thioredoxin) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004604
golevel: 5
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0004604_Phosphoadenylyl-sulfate_reductase_(thioredoxin)_activity


id: GO:0004616
description: Phosphogluconate dehydrogenase (decarboxylating) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004616
golevel: 5
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0004616_Phosphogluconate_dehydrogenase_(decarboxylating)_activity


id: GO:0004639
description: Phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004639
golevel: 5
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0004639_Phosphoribosylaminoimidazolesuccinocarboxamide_synthase_activity


id: GO:0004641
description: Phosphoribosylformylglycinamidine cyclo-ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004641
golevel: 5
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0004641_Phosphoribosylformylglycinamidine_cyclo-ligase_activity


id: GO:0004643
description: Phosphoribosylaminoimidazolecarboxamide formyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004643
golevel: 5
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0004643_Phosphoribosylaminoimidazolecarboxamide_formyltransferase_activity


id: GO:0004648
description: O-phospho-L-serine:2-oxoglutarate aminotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004648
golevel: 5
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0004648_O-phospho-L-serine:2-oxoglutarate_aminotransferase_activity


id: GO:0004719
description: protein-L-isoaspartate (D-aspartate) O-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004719
golevel: 5
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0004719_protein-L-isoaspartate_(D-aspartate)_O-methyltransferase_activity


id: GO:0004748
description: Ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0004748
golevel: 6
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0004748_Ribonucleoside-diphosphate_reductase_activity,_thioredoxin_disulfide_as_acceptor


id: GO:0005315
description: Inorganic phosphate transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0005315
golevel: 5
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0005315_Inorganic_phosphate_transmembrane_transporter_activity


id: GO:0006303
description: Double-strand break repair via nonhomologous end joining
memo: https://amigo.geneontology.org/amigo/term/GO:0006303
golevel: 7
name:
  GOBP.STRING_v12.0_1416779_STRINGid_GO:0006303_Double-strand_break_repair_via_nonhomologous_end_joining


id: GO:0006515
description: Protein quality control for misfolded or incompletely synthesized proteins
memo: https://amigo.geneontology.org/amigo/term/GO:0006515
golevel: 7
name:
  GOBP.STRING_v12.0_1416779_STRINGid_GO:0006515_Protein_quality_control_for_misfolded_or_incompletely_synthesized_proteins


id: GO:0006614
description: SRP-dependent cotranslational protein targeting to membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0006614
golevel: 6
name:
  GOBP.STRING_v12.0_1416779_STRINGid_GO:0006614_SRP-dependent_cotranslational_protein_targeting_to_membrane


id: GO:0008028
description: Monocarboxylic acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008028
golevel: 4
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0008028_Monocarboxylic_acid_transmembrane_transporter_activity


id: GO:0008108
description: UDP-glucose:hexose-1-phosphate uridylyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008108
golevel: 6
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0008108_UDP-glucose:hexose-1-phosphate_uridylyltransferase_activity


id: GO:0008263
description: Pyrimidine-specific mismatch base pair DNA N-glycosylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008263
golevel: 6
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0008263_Pyrimidine-specific_mismatch_base_pair_DNA_N-glycosylase_activity


id: GO:0008271
description: Secondary active sulfate transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008271
golevel: 5
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0008271_Secondary_active_sulfate_transmembrane_transporter_activity


id: GO:0008444
description: CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008444
golevel: 6
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0008444_CDP-diacylglycerol-glycerol-3-phosphate_3-phosphatidyltransferase_activity


id: GO:0008534
description: Oxidized purine nucleobase lesion DNA N-glycosylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008534
golevel: 6
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0008534_Oxidized_purine_nucleobase_lesion_DNA_N-glycosylase_activity


id: GO:0008659
description: (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008659
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0008659_(3R)-hydroxymyristoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0008686
description: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008686
golevel: 4
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0008686_3,4-dihydroxy-2-butanone-4-phosphate_synthase_activity


id: GO:0008690
description: 3-deoxy-manno-octulosonate cytidylyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008690
golevel: 6
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0008690_3-deoxy-manno-octulosonate_cytidylyltransferase_activity


id: GO:0008693
description: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008693
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0008693_3-hydroxydecanoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0008697
description: 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008697
golevel: 5
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0008697_4-deoxy-L-threo-5-hexosulose-uronate_ketol-isomerase_activity


id: GO:0008703
description: 5-amino-6-(5-phosphoribosylamino)uracil reductase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008703
golevel: 5
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0008703_5-amino-6-(5-phosphoribosylamino)uracil_reductase_activity


id: GO:0008757
description: S-adenosylmethionine-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008757
golevel: 5
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0008757_S-adenosylmethionine-dependent_methyltransferase_activity


id: GO:0008759
description: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008759
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0008759_UDP-3-O-[3-hydroxymyristoyl]_N-acetylglucosamine_deacetylase_activity


id: GO:0008760
description: UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008760
golevel: 4
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0008760_UDP-N-acetylglucosamine_1-carboxyvinyltransferase_activity


id: GO:0008764
description: UDP-N-acetylmuramoylalanine-D-glutamate ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008764
golevel: 5
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0008764_UDP-N-acetylmuramoylalanine-D-glutamate_ligase_activity


id: GO:0008765
description: UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008765
golevel: 5
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0008765_UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate_ligase_activity


id: GO:0008766
description: UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008766
golevel: 5
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0008766_UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine_ligase_activity


id: GO:0008780
description: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008780
golevel: 6
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0008780_acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine_O-acyltransferase_activity


id: GO:0008817
description: cob(I)yrinic acid a,c-diamide adenosyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008817
golevel: 4
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0008817_cob(I)yrinic_acid_a,c-diamide_adenosyltransferase_activity


id: GO:0008835
description: Diaminohydroxyphosphoribosylaminopyrimidine deaminase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008835
golevel: 5
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0008835_Diaminohydroxyphosphoribosylaminopyrimidine_deaminase_activity


id: GO:0008961
description: Phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008961
golevel: 3
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0008961_Phosphatidylglycerol-prolipoprotein_diacylglyceryl_transferase_activity


id: GO:0008963
description: phospho-N-acetylmuramoyl-pentapeptide-transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008963
golevel: 5
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0008963_phospho-N-acetylmuramoyl-pentapeptide-transferase_activity


id: GO:0009007
description: Site-specific DNA-methyltransferase (adenine-specific) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0009007
golevel: 5
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0009007_Site-specific_DNA-methyltransferase_(adenine-specific)_activity


id: GO:0009095
description: Aromatic amino acid family biosynthetic process, prephenate pathway
memo: https://amigo.geneontology.org/amigo/term/GO:0009095
golevel: 7
name:
  GOBP.STRING_v12.0_1416779_STRINGid_GO:0009095_Aromatic_amino_acid_family_biosynthetic_process,_prephenate_pathway


id: GO:0009130
description: Pyrimidine nucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009130
golevel: 7
name:
  GOBP.STRING_v12.0_1416779_STRINGid_GO:0009130_Pyrimidine_nucleoside_monophosphate_biosynthetic_process


id: GO:0009148
description: Pyrimidine nucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009148
golevel: 7
name:
  GOBP.STRING_v12.0_1416779_STRINGid_GO:0009148_Pyrimidine_nucleoside_triphosphate_biosynthetic_process


id: GO:0009157
description: Deoxyribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009157
golevel: 7
name:
  GOBP.STRING_v12.0_1416779_STRINGid_GO:0009157_Deoxyribonucleoside_monophosphate_biosynthetic_process


id: GO:0009168
description: Purine ribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009168
golevel: 8
name:
  GOBP.STRING_v12.0_1416779_STRINGid_GO:0009168_Purine_ribonucleoside_monophosphate_biosynthetic_process


id: GO:0009173
description: Pyrimidine ribonucleoside monophosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009173
golevel: 8
name:
  GOBP.STRING_v12.0_1416779_STRINGid_GO:0009173_Pyrimidine_ribonucleoside_monophosphate_metabolic_process


id: GO:0009174
description: Pyrimidine ribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009174
golevel: 8
name:
  GOBP.STRING_v12.0_1416779_STRINGid_GO:0009174_Pyrimidine_ribonucleoside_monophosphate_biosynthetic_process


id: GO:0009175
description: Pyrimidine ribonucleoside monophosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009175
golevel: 8
name:
  GOBP.STRING_v12.0_1416779_STRINGid_GO:0009175_Pyrimidine_ribonucleoside_monophosphate_catabolic_process


id: GO:0009176
description: Pyrimidine deoxyribonucleoside monophosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009176
golevel: 8
name:
  GOBP.STRING_v12.0_1416779_STRINGid_GO:0009176_Pyrimidine_deoxyribonucleoside_monophosphate_metabolic_process


id: GO:0009177
description: Pyrimidine deoxyribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009177
golevel: 8
name:
  GOBP.STRING_v12.0_1416779_STRINGid_GO:0009177_Pyrimidine_deoxyribonucleoside_monophosphate_biosynthetic_process


id: GO:0009206
description: Purine ribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009206
golevel: 8
name:
  GOBP.STRING_v12.0_1416779_STRINGid_GO:0009206_Purine_ribonucleoside_triphosphate_biosynthetic_process


id: GO:0009208
description: Pyrimidine ribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009208
golevel: 8
name:
  GOBP.STRING_v12.0_1416779_STRINGid_GO:0009208_Pyrimidine_ribonucleoside_triphosphate_metabolic_process


id: GO:0009209
description: Pyrimidine ribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009209
golevel: 8
name:
  GOBP.STRING_v12.0_1416779_STRINGid_GO:0009209_Pyrimidine_ribonucleoside_triphosphate_biosynthetic_process


id: GO:0009210
description: Pyrimidine ribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009210
golevel: 8
name:
  GOBP.STRING_v12.0_1416779_STRINGid_GO:0009210_Pyrimidine_ribonucleoside_triphosphate_catabolic_process


id: GO:0009211
description: Pyrimidine deoxyribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009211
golevel: 8
name:
  GOBP.STRING_v12.0_1416779_STRINGid_GO:0009211_Pyrimidine_deoxyribonucleoside_triphosphate_metabolic_process


id: GO:0009212
description: Pyrimidine deoxyribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009212
golevel: 8
name:
  GOBP.STRING_v12.0_1416779_STRINGid_GO:0009212_Pyrimidine_deoxyribonucleoside_triphosphate_biosynthetic_process


id: GO:0009213
description: Pyrimidine deoxyribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009213
golevel: 8
name:
  GOBP.STRING_v12.0_1416779_STRINGid_GO:0009213_Pyrimidine_deoxyribonucleoside_triphosphate_catabolic_process


id: GO:0009215
description: Purine deoxyribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009215
golevel: 8
name:
  GOBP.STRING_v12.0_1416779_STRINGid_GO:0009215_Purine_deoxyribonucleoside_triphosphate_metabolic_process


id: GO:0009217
description: Purine deoxyribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009217
golevel: 8
name:
  GOBP.STRING_v12.0_1416779_STRINGid_GO:0009217_Purine_deoxyribonucleoside_triphosphate_catabolic_process


id: GO:0009678
description: Pyrophosphate hydrolysis-driven proton transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0009678
golevel: 5
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0009678_Pyrophosphate_hydrolysis-driven_proton_transmembrane_transporter_activity


id: GO:0010142
description: Farnesyl diphosphate biosynthetic process, mevalonate pathway
memo: https://amigo.geneontology.org/amigo/term/GO:0010142
golevel: 7
name:
  GOBP.STRING_v12.0_1416779_STRINGid_GO:0010142_Farnesyl_diphosphate_biosynthetic_process,_mevalonate_pathway


id: GO:0010557
description: Positive regulation of macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010557
golevel: 7
name:
  GOBP.STRING_v12.0_1416779_STRINGid_GO:0010557_Positive_regulation_of_macromolecule_biosynthetic_process


id: GO:0010558
description: Negative regulation of macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010558
golevel: 7
name:
  GOBP.STRING_v12.0_1416779_STRINGid_GO:0010558_Negative_regulation_of_macromolecule_biosynthetic_process


id: GO:0010604
description: Positive regulation of macromolecule metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010604
golevel: 6
name:
  GOBP.STRING_v12.0_1416779_STRINGid_GO:0010604_Positive_regulation_of_macromolecule_metabolic_process


id: GO:0010605
description: Negative regulation of macromolecule metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010605
golevel: 6
name:
  GOBP.STRING_v12.0_1416779_STRINGid_GO:0010605_Negative_regulation_of_macromolecule_metabolic_process


id: GO:0015318
description: Inorganic molecular entity transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015318
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0015318_Inorganic_molecular_entity_transmembrane_transporter_activity


id: GO:0015453
description: Oxidoreduction-driven active transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015453
golevel: 5
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0015453_Oxidoreduction-driven_active_transmembrane_transporter_activity


id: GO:0015932
description: Nucleobase-containing compound transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015932
golevel: 3
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0015932_Nucleobase-containing_compound_transmembrane_transporter_activity


id: GO:0016614
description: Oxidoreductase activity, acting on CH-OH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016614
golevel: 3
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0016614_Oxidoreductase_activity,_acting_on_CH-OH_group_of_donors


id: GO:0016616
description: Oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016616
golevel: 4
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0016616_Oxidoreductase_activity,_acting_on_the_CH-OH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016620
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016620
golevel: 4
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0016620_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016624
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016624
golevel: 4
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0016624_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_disulfide_as_acceptor


id: GO:0016627
description: Oxidoreductase activity, acting on the CH-CH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016627
golevel: 3
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0016627_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors


id: GO:0016628
description: Oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016628
golevel: 4
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0016628_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016634
description: Oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016634
golevel: 4
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0016634_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_oxygen_as_acceptor


id: GO:0016635
memo: https://amigo.geneontology.org/amigo/term/GO:0016635
golevel: 4
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0016635_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_quinone_or_related_compound_as_acceptor

description:
  Oxidoreductase activity, acting on the CH-CH group of donors, quinone or related compound as acceptor


id: GO:0016638
description: Oxidoreductase activity, acting on the CH-NH2 group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016638
golevel: 3
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0016638_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors


id: GO:0016639
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016639
golevel: 4
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0016639_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016641
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016641
golevel: 4
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0016641_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_oxygen_as_acceptor


id: GO:0016642
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016642
golevel: 4
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0016642_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_disulfide_as_acceptor


id: GO:0016645
description: Oxidoreductase activity, acting on the CH-NH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016645
golevel: 3
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0016645_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors


id: GO:0016646
description: Oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016646
golevel: 4
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0016646_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016652
description: Oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016652
golevel: 4
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0016652_Oxidoreductase_activity,_acting_on_NAD(P)H,_NAD(P)_as_acceptor


id: GO:0016655
description: Oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016655
golevel: 4
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0016655_Oxidoreductase_activity,_acting_on_NAD(P)H,_quinone_or_similar_compound_as_acceptor


id: GO:0016667
description: Oxidoreductase activity, acting on a sulfur group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016667
golevel: 3
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0016667_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors


id: GO:0016668
description: Oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016668
golevel: 4
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0016668_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_NAD(P)_as_acceptor


id: GO:0016671
description: Oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016671
golevel: 4
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0016671_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_disulfide_as_acceptor


id: GO:0016675
description: Oxidoreductase activity, acting on a heme group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016675
golevel: 3
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0016675_Oxidoreductase_activity,_acting_on_a_heme_group_of_donors


id: GO:0016679
description: Oxidoreductase activity, acting on diphenols and related substances as donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016679
golevel: 3
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0016679_Oxidoreductase_activity,_acting_on_diphenols_and_related_substances_as_donors


id: GO:0016684
description: Oxidoreductase activity, acting on peroxide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016684
golevel: 3
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0016684_Oxidoreductase_activity,_acting_on_peroxide_as_acceptor


id: GO:0016701
description: Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen
memo: https://amigo.geneontology.org/amigo/term/GO:0016701
golevel: 3
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0016701_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen


id: GO:0016702
memo: https://amigo.geneontology.org/amigo/term/GO:0016702
golevel: 4
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0016702_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen,_incorporation_of_two_atoms_of_oxygen

description:
  Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen


id: GO:0016703
memo: https://amigo.geneontology.org/amigo/term/GO:0016703
golevel: 4
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0016703_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen,_incorporation_of_one_atom_of_oxygen_(internal_monooxygenases_or_internal_mixed_function_oxidases)

description:
  Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)


id: GO:0016705
memo: https://amigo.geneontology.org/amigo/term/GO:0016705
golevel: 3
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0016705_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen


id: GO:0016709
memo: https://amigo.geneontology.org/amigo/term/GO:0016709
golevel: 4
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0016709_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen,_NAD(P)H_as_one_donor,_and_incorporation_of_one_atom_of_oxygen

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen


id: GO:0016712
memo: https://amigo.geneontology.org/amigo/term/GO:0016712
golevel: 4
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0016712_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen,_reduced_flavin_or_flavoprotein_as_one_donor,_and_incorporation_of_one_atom_of_oxygen

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen


id: GO:0016716
memo: https://amigo.geneontology.org/amigo/term/GO:0016716
golevel: 4
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0016716_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen,_another_compound_as_one_donor,_and_incorporation_of_one_atom_of_oxygen

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, another compound as one donor, and incorporation of one atom of oxygen


id: GO:0016717
memo: https://amigo.geneontology.org/amigo/term/GO:0016717
golevel: 4
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0016717_Oxidoreductase_activity,_acting_on_paired_donors,_with_oxidation_of_a_pair_of_donors_resulting_in_the_reduction_of_molecular_oxygen_to_two_molecules_of_water

description:
  Oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water


id: GO:0016721
description: Oxidoreductase activity, acting on superoxide radicals as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016721
golevel: 3
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0016721_Oxidoreductase_activity,_acting_on_superoxide_radicals_as_acceptor


id: GO:0016726
description: Oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016726
golevel: 4
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0016726_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_NAD_or_NADP_as_acceptor


id: GO:0016728
description: Oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016728
golevel: 4
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0016728_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_disulfide_as_acceptor


id: GO:0016730
description: Oxidoreductase activity, acting on iron-sulfur proteins as donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016730
golevel: 3
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0016730_Oxidoreductase_activity,_acting_on_iron-sulfur_proteins_as_donors


id: GO:0016731
description: Oxidoreductase activity, acting on iron-sulfur proteins as donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016731
golevel: 4
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0016731_Oxidoreductase_activity,_acting_on_iron-sulfur_proteins_as_donors,_NAD_or_NADP_as_acceptor


id: GO:0016742
description: Hydroxymethyl-, formyl- and related transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0016742
golevel: 4
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0016742_Hydroxymethyl-,_formyl-_and_related_transferase_activity


id: GO:0016747
description: Acyltransferase activity, transferring groups other than amino-acyl groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016747
golevel: 4
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0016747_Acyltransferase_activity,_transferring_groups_other_than_amino-acyl_groups


id: GO:0016765
description: Transferase activity, transferring alkyl or aryl (other than methyl) groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016765
golevel: 3
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0016765_Transferase_activity,_transferring_alkyl_or_aryl_(other_than_methyl)_groups


id: GO:0016772
description: Transferase activity, transferring phosphorus-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016772
golevel: 3
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0016772_Transferase_activity,_transferring_phosphorus-containing_groups


id: GO:0016773
description: Phosphotransferase activity, alcohol group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016773
golevel: 4
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0016773_Phosphotransferase_activity,_alcohol_group_as_acceptor


id: GO:0016774
description: Phosphotransferase activity, carboxyl group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016774
golevel: 4
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0016774_Phosphotransferase_activity,_carboxyl_group_as_acceptor


id: GO:0016775
description: Phosphotransferase activity, nitrogenous group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016775
golevel: 4
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0016775_Phosphotransferase_activity,_nitrogenous_group_as_acceptor


id: GO:0016776
description: Phosphotransferase activity, phosphate group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016776
golevel: 4
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0016776_Phosphotransferase_activity,_phosphate_group_as_acceptor


id: GO:0016780
description: Phosphotransferase activity, for other substituted phosphate groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016780
golevel: 4
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0016780_Phosphotransferase_activity,_for_other_substituted_phosphate_groups


id: GO:0016782
description: Transferase activity, transferring sulphur-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016782
golevel: 3
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0016782_Transferase_activity,_transferring_sulphur-containing_groups


id: GO:0016796
memo: https://amigo.geneontology.org/amigo/term/GO:0016796
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0016796_Exonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_5-phosphomonoesters

description:
  Exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5-phosphomonoesters


id: GO:0016810
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
memo: https://amigo.geneontology.org/amigo/term/GO:0016810
golevel: 3
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0016810_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds


id: GO:0016811
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
memo: https://amigo.geneontology.org/amigo/term/GO:0016811
golevel: 4
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0016811_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_linear_amides


id: GO:0016812
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
memo: https://amigo.geneontology.org/amigo/term/GO:0016812
golevel: 4
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0016812_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_cyclic_amides


id: GO:0016813
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines
memo: https://amigo.geneontology.org/amigo/term/GO:0016813
golevel: 4
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0016813_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_linear_amidines


id: GO:0016814
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines
memo: https://amigo.geneontology.org/amigo/term/GO:0016814
golevel: 4
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0016814_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_cyclic_amidines


id: GO:0016818
description: Hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
memo: https://amigo.geneontology.org/amigo/term/GO:0016818
golevel: 4
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0016818_Hydrolase_activity,_acting_on_acid_anhydrides,_in_phosphorus-containing_anhydrides


id: GO:0016825
description: Hydrolase activity, acting on acid phosphorus-nitrogen bonds
memo: https://amigo.geneontology.org/amigo/term/GO:0016825
golevel: 3
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0016825_Hydrolase_activity,_acting_on_acid_phosphorus-nitrogen_bonds


id: GO:0016837
description: Carbon-oxygen lyase activity, acting on polysaccharides
memo: https://amigo.geneontology.org/amigo/term/GO:0016837
golevel: 4
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0016837_Carbon-oxygen_lyase_activity,_acting_on_polysaccharides


id: GO:0016855
description: Racemase and epimerase activity, acting on amino acids and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0016855
golevel: 4
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0016855_Racemase_and_epimerase_activity,_acting_on_amino_acids_and_derivatives


id: GO:0016857
description: Racemase and epimerase activity, acting on carbohydrates and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0016857
golevel: 4
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0016857_Racemase_and_epimerase_activity,_acting_on_carbohydrates_and_derivatives


id: GO:0016861
description: Intramolecular oxidoreductase activity, interconverting aldoses and ketoses
memo: https://amigo.geneontology.org/amigo/term/GO:0016861
golevel: 4
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0016861_Intramolecular_oxidoreductase_activity,_interconverting_aldoses_and_ketoses


id: GO:0016863
description: Intramolecular oxidoreductase activity, transposing C=C bonds
memo: https://amigo.geneontology.org/amigo/term/GO:0016863
golevel: 4
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0016863_Intramolecular_oxidoreductase_activity,_transposing_C=C_bonds


id: GO:0016868
description: Intramolecular transferase activity, phosphotransferases
memo: https://amigo.geneontology.org/amigo/term/GO:0016868
golevel: 4
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0016868_Intramolecular_transferase_activity,_phosphotransferases


id: GO:0016869
description: Intramolecular transferase activity, transferring amino groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016869
golevel: 4
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0016869_Intramolecular_transferase_activity,_transferring_amino_groups


id: GO:0016884
description: Carbon-nitrogen ligase activity, with glutamine as amido-N-donor
memo: https://amigo.geneontology.org/amigo/term/GO:0016884
golevel: 4
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0016884_Carbon-nitrogen_ligase_activity,_with_glutamine_as_amido-N-donor


id: GO:0016888
description: Endodeoxyribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016888
golevel: 4
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0016888_Endodeoxyribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016889
description: Endodeoxyribonuclease activity, producing 3-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016889
golevel: 4
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0016889_Endodeoxyribonuclease_activity,_producing_3-phosphomonoesters


id: GO:0016891
description: Endoribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016891
golevel: 4
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0016891_Endoribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016893
memo: https://amigo.geneontology.org/amigo/term/GO:0016893
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0016893_Endonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_5-phosphomonoesters

description:
  Endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5-phosphomonoesters


id: GO:0016894
memo: https://amigo.geneontology.org/amigo/term/GO:0016894
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0016894_Endonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_3-phosphomonoesters

description:
  Endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3-phosphomonoesters


id: GO:0016895
description: Exodeoxyribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016895
golevel: 6
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0016895_Exodeoxyribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016896
description: Exoribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016896
golevel: 6
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0016896_Exoribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016901
memo: https://amigo.geneontology.org/amigo/term/GO:0016901
golevel: 4
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0016901_Oxidoreductase_activity,_acting_on_the_CH-OH_group_of_donors,_quinone_or_similar_compound_as_acceptor

description:
  Oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor


id: GO:0016903
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016903
golevel: 3
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0016903_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors


id: GO:0018339
description: peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid
memo: https://amigo.geneontology.org/amigo/term/GO:0018339
golevel: 8
name:
  GOBP.STRING_v12.0_1416779_STRINGid_GO:0018339_peptidyl-L-beta-methylthioaspartic_acid_biosynthetic_process_from_peptidyl-aspartic_acid


id: GO:0019171
description: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0019171
golevel: 5
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0019171_3-hydroxyacyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0019219
description: Regulation of nucleobase-containing compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0019219
golevel: 6
name:
  GOBP.STRING_v12.0_1416779_STRINGid_GO:0019219_Regulation_of_nucleobase-containing_compound_metabolic_process


id: GO:0019243
description: Methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione
memo: https://amigo.geneontology.org/amigo/term/GO:0019243
golevel: 7
name:
  GOBP.STRING_v12.0_1416779_STRINGid_GO:0019243_Methylglyoxal_catabolic_process_to_D-lactate_via_S-lactoyl-glutathione


id: GO:0019287
description: Isopentenyl diphosphate biosynthetic process, mevalonate pathway
memo: https://amigo.geneontology.org/amigo/term/GO:0019287
golevel: 6
name:
  GOBP.STRING_v12.0_1416779_STRINGid_GO:0019287_Isopentenyl_diphosphate_biosynthetic_process,_mevalonate_pathway


id: GO:0019379
memo: https://amigo.geneontology.org/amigo/term/GO:0019379
golevel: 5
name:
  GOBP.STRING_v12.0_1416779_STRINGid_GO:0019379_Sulfate_assimilation,_phosphoadenylyl_sulfate_reduction_by_phosphoadenylyl-sulfate_reductase_(thioredoxin)

description:
  Sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)


id: GO:0019556
description: Histidine catabolic process to glutamate and formamide
memo: https://amigo.geneontology.org/amigo/term/GO:0019556
golevel: 5
name:
  GOBP.STRING_v12.0_1416779_STRINGid_GO:0019556_Histidine_catabolic_process_to_glutamate_and_formamide


id: GO:0019829
description: ATPase-coupled cation transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0019829
golevel: 3
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0019829_ATPase-coupled_cation_transmembrane_transporter_activity


id: GO:0030435
description: Sporulation resulting in formation of a cellular spore
memo: https://amigo.geneontology.org/amigo/term/GO:0030435
golevel: 3
name:
  GOBP.STRING_v12.0_1416779_STRINGid_GO:0030435_Sporulation_resulting_in_formation_of_a_cellular_spore


id: GO:0030613
description: Oxidoreductase activity, acting on phosphorus or arsenic in donors
memo: https://amigo.geneontology.org/amigo/term/GO:0030613
golevel: 3
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0030613_Oxidoreductase_activity,_acting_on_phosphorus_or_arsenic_in_donors


id: GO:0030614
description: Oxidoreductase activity, acting on phosphorus or arsenic in donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0030614
golevel: 4
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0030614_Oxidoreductase_activity,_acting_on_phosphorus_or_arsenic_in_donors,_disulfide_as_acceptor


id: GO:0031235
description: Intrinsic component of the cytoplasmic side of the plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031235
name:
  GOCC.STRING_v12.0_1416779_STRINGid_GO:0031235_Intrinsic_component_of_the_cytoplasmic_side_of_the_plasma_membrane


id: GO:0031554
description: Regulation of DNA-templated transcription, termination
memo: https://amigo.geneontology.org/amigo/term/GO:0031554
golevel: 6
name:
  GOBP.STRING_v12.0_1416779_STRINGid_GO:0031554_Regulation_of_DNA-templated_transcription,_termination


id: GO:0032414
description: Positive regulation of ion transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0032414
golevel: 4
name:
  GOBP.STRING_v12.0_1416779_STRINGid_GO:0032414_Positive_regulation_of_ion_transmembrane_transporter_activity


id: GO:0033177
description: Proton-transporting two-sector ATPase complex, proton-transporting domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033177
golevel: 3
name:
  GOCC.STRING_v12.0_1416779_STRINGid_GO:0033177_Proton-transporting_two-sector_ATPase_complex,_proton-transporting_domain


id: GO:0033178
description: Proton-transporting two-sector ATPase complex, catalytic domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033178
golevel: 3
name:
  GOCC.STRING_v12.0_1416779_STRINGid_GO:0033178_Proton-transporting_two-sector_ATPase_complex,_catalytic_domain


id: GO:0033283
description: ATPase-coupled organic acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033283
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0033283_ATPase-coupled_organic_acid_transmembrane_transporter_activity


id: GO:0033284
description: ATPase-coupled carboxylic acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033284
golevel: 3
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0033284_ATPase-coupled_carboxylic_acid_transmembrane_transporter_activity


id: GO:0033467
description: CMP-keto-3-deoxy-D-manno-octulosonic acid metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0033467
name:
  GOBP.STRING_v12.0_1416779_STRINGid_GO:0033467_CMP-keto-3-deoxy-D-manno-octulosonic_acid_metabolic_process


id: GO:0033468
description: CMP-keto-3-deoxy-D-manno-octulosonic acid biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0033468
golevel: 6
name:
  GOBP.STRING_v12.0_1416779_STRINGid_GO:0033468_CMP-keto-3-deoxy-D-manno-octulosonic_acid_biosynthetic_process


id: GO:0033512
description: L-lysine catabolic process to acetyl-CoA via saccharopine
memo: https://amigo.geneontology.org/amigo/term/GO:0033512
golevel: 6
name:
  GOBP.STRING_v12.0_1416779_STRINGid_GO:0033512_L-lysine_catabolic_process_to_acetyl-CoA_via_saccharopine


id: GO:0033695
description: Oxidoreductase activity, acting on CH or CH2 groups, quinone or similar compound as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0033695
golevel: 4
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0033695_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_quinone_or_similar_compound_as_acceptor


id: GO:0033744
description: L-methionine:thioredoxin-disulfide S-oxidoreductase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033744
golevel: 5
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0033744_L-methionine:thioredoxin-disulfide_S-oxidoreductase_activity


id: GO:0033764
description: Steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0033764
golevel: 4
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0033764_Steroid_dehydrogenase_activity,_acting_on_the_CH-OH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0033818
description: Beta-ketoacyl-acyl-carrier-protein synthase III activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033818
golevel: 5
name:
  GOMF.STRING_v12.0_1416779_STRINGid_GO:0033818_Beta-ketoacyl-acyl-carrier-protein_synthase_III_activity


