# geneInfo

ensembl_gene_id: CAL13_00005
symbol: dnaA
gene_biotype: protein_coding
description:
  Chromosomal replication initiation protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.


ensembl_gene_id: CAL13_00010
symbol: ARP88423.1
gene_biotype: protein_coding
description:
  DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of  [...]


ensembl_gene_id: CAL13_00015
symbol: gyrB
gene_biotype: protein_coding
description:
  DNA topoisomerase (ATP-hydrolyzing) subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP [...]


ensembl_gene_id: CAL13_00020
symbol: ARP84789.1
gene_biotype: protein_coding
description:
  Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: CAL13_00025
symbol: ARP84790.1
gene_biotype: protein_coding
description:
  Iron-containing alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_00030
symbol: ARP84791.1
gene_biotype: protein_coding
description:
  Taurine dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_00035
symbol: ARP84792.1
gene_biotype: protein_coding
description:
  ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_00040
symbol: ARP88424.1
gene_biotype: protein_coding
description:
  Alpha-hydroxy-acid oxidizing enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_00045
symbol: ARP84793.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_00050
symbol: ARP84794.1
gene_biotype: protein_coding
description:
  2-keto-4-pentenoate hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_00055
symbol: ARP84795.1
gene_biotype: protein_coding
description:
  NADPH:quinone oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_00065
symbol: ARP84797.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: CAL13_00075
symbol: ARP88425.1
gene_biotype: protein_coding
description:
  Hydroxyacid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_00090
symbol: ARP84801.1
gene_biotype: protein_coding
description:
  Gluconolactonase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_00095
symbol: ARP84802.1
gene_biotype: protein_coding
description:
  Acylphosphatase; Catalyzes the hydrolysis of acylphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_00105
symbol: ARP84804.1
gene_biotype: protein_coding
description:
  phytanoyl-CoA dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_00115
symbol: ARP84806.1
gene_biotype: protein_coding
description:
  2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.


ensembl_gene_id: CAL13_00120
symbol: ARP84807.1
gene_biotype: protein_coding
description:
  Polyketide cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_00125
symbol: ARP84808.1
gene_biotype: protein_coding
description:
  Nucleoside 2-deoxyribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_00130
symbol: ribB
gene_biotype: protein_coding
description:
  3,4-dihydroxy-2-butanone-4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate.


ensembl_gene_id: CAL13_00135
symbol: ARP84810.1
gene_biotype: protein_coding
description:
  SET domain-containing protein-lysine N-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_00140
symbol: ARP84811.1
gene_biotype: protein_coding
description:
  AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_00145
symbol: ARP88426.1
gene_biotype: protein_coding
description:
  Acetolactate synthase, large subunit, biosynthetic type; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_00150
symbol: ARP84812.1
gene_biotype: protein_coding
description:
  Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_00155
symbol: ARP84813.1
gene_biotype: protein_coding
description:
  DNA topoisomerase III; Decatenates replicating daughter chromosomes; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_00165
symbol: gluQ
gene_biotype: protein_coding
description:
  tRNA glutamyl-Q(34) synthetase GluQRS; Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5-dihydroxy-2- cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon; Belongs to the class-I aminoacyl-tRNA synthetase family. GluQ subfamily.


ensembl_gene_id: CAL13_00170
symbol: smg
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Smg family.


ensembl_gene_id: CAL13_00175
symbol: ARP84817.1
gene_biotype: protein_coding
description:
  Alanine racemase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_00180
symbol: argD
gene_biotype: protein_coding
description:
  Acetylornithine transaminase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.


ensembl_gene_id: CAL13_00190
symbol: ARP84820.1
gene_biotype: protein_coding
description:
  3-methylcrotonyl-CoA carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_00195
symbol: ARP84821.1
gene_biotype: protein_coding
description:
  methylcrotonoyl-CoA carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_00200
symbol: ARP84822.1
gene_biotype: protein_coding
description:
  acetyl-CoA acetyltransferase; Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family.


ensembl_gene_id: CAL13_00205
symbol: ARP84823.1
gene_biotype: protein_coding
description:
  acyl-CoA dehydrogenase; Catalyzes the formation of 3-methylbut-2-enoyl CoA from 3-methylbutanoyl CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_00210
symbol: ARP84824.1
gene_biotype: protein_coding
description:
  MerR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_00215
symbol: ARP84825.1
gene_biotype: protein_coding
description:
  Zn-dependent hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_00220
symbol: ARP84826.1
gene_biotype: protein_coding
description:
  Threonine transporter RhtB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_00225
symbol: ARP84827.1
gene_biotype: protein_coding
description:
  Cystathionine beta-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_00230
symbol: ARP84828.1
gene_biotype: protein_coding
description:
  Thiol:disulfide interchange protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_00235
symbol: ARP84829.1
gene_biotype: protein_coding
description:
  Cell division protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_00240
symbol: argS
gene_biotype: protein_coding
description:
  arginine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_00260
symbol: ARP84833.1
gene_biotype: protein_coding
description:
  Amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_00265
symbol: ARP88428.1
gene_biotype: protein_coding
description:
  LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_00275
symbol: ARP84835.1
gene_biotype: protein_coding
description:
  ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_00285
symbol: ARP84837.1
gene_biotype: protein_coding
description:
  ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.


ensembl_gene_id: CAL13_00290
symbol: cpdA
gene_biotype: protein_coding
description:
  Phosphodiesterase; Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes.


ensembl_gene_id: CAL13_00315
symbol: leuA
gene_biotype: protein_coding
description:
  2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 2 subfamily.


ensembl_gene_id: CAL13_00325
symbol: ARP84844.1
gene_biotype: protein_coding
description:
  RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: CAL13_00330
symbol: ARP84845.1
gene_biotype: protein_coding
description:
  Bacterioferritin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_00335
symbol: ARP84846.1
gene_biotype: protein_coding
description:
  EamA family transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_00350
symbol: prfC
gene_biotype: protein_coding
description:
  Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.


ensembl_gene_id: CAL13_00360
symbol: rhlE
gene_biotype: protein_coding
description:
  RNA helicase; DEAD-box RNA helicase involved in ribosome assembly. Has RNA- dependent ATPase activity and unwinds double-stranded RNA.


ensembl_gene_id: CAL13_00370
symbol: ARP84853.1
gene_biotype: protein_coding
description:
  GTPase SAR1; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_00405
symbol: ARP88431.1
gene_biotype: protein_coding
description:
  ClpXP protease specificity-enhancing factor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_00410
symbol: ARP84858.1
gene_biotype: protein_coding
description:
  Glutathione S-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_00415
symbol: ARP84859.1
gene_biotype: protein_coding
description:
  Cytochrome c1; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_00420
symbol: ARP84860.1
gene_biotype: protein_coding
description:
  Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.


ensembl_gene_id: CAL13_00425
symbol: ARP88432.1
gene_biotype: protein_coding
description:
  Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.


ensembl_gene_id: CAL13_00430
symbol: mscL
gene_biotype: protein_coding
description:
  Large-conductance mechanosensitive channel protein; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell.


ensembl_gene_id: CAL13_00435
symbol: ARP84862.1
gene_biotype: protein_coding
description:
  Nif3-like dinuclear metal center hexameric protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_00440
symbol: ARP84863.1
gene_biotype: protein_coding
description:
  2-alkenal reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_00450
symbol: tatC
gene_biotype: protein_coding
description:
  Twin-arginine translocase subunit TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides.


ensembl_gene_id: CAL13_00455
symbol: tatB
gene_biotype: protein_coding
description:
  Twin-arginine translocase subunit TatB; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation.


ensembl_gene_id: CAL13_00460
symbol: tatA
gene_biotype: protein_coding
description:
  Twin-arginine translocase subunit TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.


ensembl_gene_id: CAL13_00465
symbol: ARP84868.1
gene_biotype: protein_coding
description:
  Histidine triad nucleotide-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_00470
symbol: hisE
gene_biotype: protein_coding
description:
  phosphoribosyl-ATP diphosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_00475
symbol: hisI
gene_biotype: protein_coding
description:
  phosphoribosyl-AMP cyclohydrolase; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP.


ensembl_gene_id: CAL13_00480
symbol: hisF
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase subunit HisF; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.


ensembl_gene_id: CAL13_00485
symbol: hisA
gene_biotype: protein_coding
description:
  1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_00490
symbol: hisH
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase subunit HisH; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.


ensembl_gene_id: CAL13_00495
symbol: hisB
gene_biotype: protein_coding
description:
  Imidazoleglycerol-phosphate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_00500
symbol: hisC
gene_biotype: protein_coding
description:
  Histidinol-phosphate transaminase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.


ensembl_gene_id: CAL13_00505
symbol: hisD
gene_biotype: protein_coding
description:
  Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.


ensembl_gene_id: CAL13_00510
symbol: hisG
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Short subfamily.


ensembl_gene_id: CAL13_00515
symbol: murA
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.


ensembl_gene_id: CAL13_00520
symbol: ARP84876.1
gene_biotype: protein_coding
description:
  BolA family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the BolA/IbaG family.


ensembl_gene_id: CAL13_00525
symbol: ARP88436.1
gene_biotype: protein_coding
description:
  Metal-dependent hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_00530
symbol: ARP88437.1
gene_biotype: protein_coding
description:
  ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_00535
symbol: ARP84877.1
gene_biotype: protein_coding
description:
  ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_00545
symbol: ARP84879.1
gene_biotype: protein_coding
description:
  Outer membrane lipid asymmetry maintenance protein MlaD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_00560
symbol: ARP88439.1
gene_biotype: protein_coding
description:
  Chromate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_00570
symbol: gltD
gene_biotype: protein_coding
description:
  Glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_00575
symbol: ARP84883.1
gene_biotype: protein_coding
description:
  Glutamate synthase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_00585
symbol: ARP84885.1
gene_biotype: protein_coding
description:
  S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.


ensembl_gene_id: CAL13_00600
symbol: rpoH
gene_biotype: protein_coding
description:
  RNA polymerase factor sigma-32; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes.


ensembl_gene_id: CAL13_00610
symbol: ARP84890.1
gene_biotype: protein_coding
description:
  Sodium:proton exchanger; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_00625
symbol: ARP84892.1
gene_biotype: protein_coding
description:
  Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_00630
symbol: ARP84893.1
gene_biotype: protein_coding
description:
  C4-dicarboxylate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_00635
symbol: ARP84894.1
gene_biotype: protein_coding
description:
  L-dehydroascorbate transporter large permease subunit; TRAP family transporter; with YiaMO is involved in the uptake of L-dehydroascorbate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_00645
symbol: ARP84896.1
gene_biotype: protein_coding
description:
  Dihydroxy-acid dehydratase; Catalyzes the formation of 3-methyl-2-oxobutanoate from 2,3,-dihydroxy-3-methylbutanoate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the IlvD/Edd family.


ensembl_gene_id: CAL13_00650
symbol: ARP84897.1
gene_biotype: protein_coding
description:
  NUDIX hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_00655
symbol: ARP84898.1
gene_biotype: protein_coding
description:
  Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).


ensembl_gene_id: CAL13_00660
symbol: ARP84899.1
gene_biotype: protein_coding
description:
  Cytochrome c oxidase subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.


ensembl_gene_id: CAL13_00670
symbol: ARP84901.1
gene_biotype: protein_coding
description:
  Cytochrome c oxidase subunit 3; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_00675
symbol: ARP84902.1
gene_biotype: protein_coding
description:
  Twin transmembrane helix small protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_00690
symbol: ARP84905.1
gene_biotype: protein_coding
description:
  Heme A synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_00695
symbol: ctaB
gene_biotype: protein_coding
description:
  Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.


ensembl_gene_id: CAL13_00700
symbol: ARP84906.1
gene_biotype: protein_coding
description:
  SCO family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_00730
symbol: glmU
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain.


ensembl_gene_id: CAL13_00735
symbol: ARP84912.1
gene_biotype: protein_coding
description:
  MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_00740
symbol: ARP84913.1
gene_biotype: protein_coding
description:
  UDP-glucose 6-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_00745
symbol: ARP84914.1
gene_biotype: protein_coding
description:
  Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_00755
symbol: glmS
gene_biotype: protein_coding
description:
  Glutamine--fructose-6-phosphate transaminase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.


ensembl_gene_id: CAL13_00790
symbol: ARP84921.1
gene_biotype: protein_coding
description:
  Carboxyvinyl-carboxyphosphonate phosphorylmutase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_00795
symbol: ARP84922.1
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LeuD family.


ensembl_gene_id: CAL13_00800
symbol: ARP84923.1
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_00805
symbol: ARP84924.1
gene_biotype: protein_coding
description:
  GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_00820
symbol: ARP88444.1
gene_biotype: protein_coding
description:
  AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_00835
symbol: ARP84929.1
gene_biotype: protein_coding
description:
  Ribonuclease activity regulator RraA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_00840
symbol: ARP84930.1
gene_biotype: protein_coding
description:
  LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_00845
symbol: ARP84931.1
gene_biotype: protein_coding
description:
  PsiF repeat family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_00850
symbol: ARP84932.1
gene_biotype: protein_coding
description:
  XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_00855
symbol: ARP84933.1
gene_biotype: protein_coding
description:
  Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_00860
symbol: ARP84934.1
gene_biotype: protein_coding
description:
  Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_00865
symbol: glnQ
gene_biotype: protein_coding
description:
  Similar to ATP-binding component of ABC transporters; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_00870
symbol: ARP84936.1
gene_biotype: protein_coding
description:
  FAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_00875
symbol: ARP88445.1
gene_biotype: protein_coding
description:
  Cyclopropane-fatty-acyl-phospholipid synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_00880
symbol: ARP88446.1
gene_biotype: protein_coding
description:
  FAD-linked oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_00905
symbol: ARP84941.1
gene_biotype: protein_coding
description:
  CoA transferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CoA-transferase III family.


ensembl_gene_id: CAL13_00915
symbol: ARP84943.1
gene_biotype: protein_coding
description:
  Phosphate acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_00920
symbol: ARP84944.1
gene_biotype: protein_coding
description:
  Monoamine oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_00925
symbol: ARP84945.1
gene_biotype: protein_coding
description:
  IclR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_00930
symbol: ARP84946.1
gene_biotype: protein_coding
description:
  Isocitrate dehydrogenase (NADP(+)); Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the monomeric-type IDH family.


ensembl_gene_id: CAL13_00940
symbol: ARP84948.1
gene_biotype: protein_coding
description:
  C4-dicarboxylate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_00945
symbol: recC
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease V subunit gamma; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and re [...]


ensembl_gene_id: CAL13_00950
symbol: ARP84950.1
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease V subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_00955
symbol: ARP84951.1
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease V subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_00960
symbol: ARP88447.1
gene_biotype: protein_coding
description:
  Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_00970
symbol: ARP88448.1
gene_biotype: protein_coding
description:
  LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: CAL13_00980
symbol: ARP84954.1
gene_biotype: protein_coding
description:
  5-oxoprolinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_01000
symbol: ARP84958.1
gene_biotype: protein_coding
description:
  YajQ family cyclic di-GMP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0234 family.


ensembl_gene_id: CAL13_01010
symbol: ARP84960.1
gene_biotype: protein_coding
description:
  Short-chain dehydrogenase/reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: CAL13_01020
symbol: ARP84961.1
gene_biotype: protein_coding
description:
  Sulfate ABC transporter permease subunit CysW; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_01025
symbol: ARP84962.1
gene_biotype: protein_coding
description:
  Sulfate ABC transporter permease subunit CysT; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: CAL13_01030
symbol: ARP84963.1
gene_biotype: protein_coding
description:
  Thiosulfate transporter subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_01035
symbol: ARP84964.1
gene_biotype: protein_coding
description:
  NADH pyrophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_01040
symbol: ARP84965.1
gene_biotype: protein_coding
description:
  Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_01045
symbol: ARP84966.1
gene_biotype: protein_coding
description:
  Phospholipid-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_01050
symbol: gmhA
gene_biotype: protein_coding
description:
  Phosphoheptose isomerase; Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate.


ensembl_gene_id: CAL13_01060
symbol: ARP84969.1
gene_biotype: protein_coding
description:
  16S rRNA (cytidine(1402)-2'-O)-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_01070
symbol: ARP84971.1
gene_biotype: protein_coding
description:
  Septal ring lytic transglycosylase RlpA family lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_01085
symbol: ARP88450.1
gene_biotype: protein_coding
description:
  Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_01090
symbol: hprK
gene_biotype: protein_coding
description:
  HPr kinase/phosphorylase; Catalyzes the ATP- as well as the pyrophosphate-dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK/P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P-Ser-HPr).


ensembl_gene_id: CAL13_01095
symbol: ARP84975.1
gene_biotype: protein_coding
description:
  PTS sugar transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_01100
symbol: ARP84976.1
gene_biotype: protein_coding
description:
  Ribosomal subunit interface protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_01105
symbol: ARP84977.1
gene_biotype: protein_coding
description:
  LPS export ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_01110
symbol: lptA
gene_biotype: protein_coding
description:
  Lipopolysaccharide transport periplasmic protein LptA; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane.


ensembl_gene_id: CAL13_01115
symbol: ARP84978.1
gene_biotype: protein_coding
description:
  LPS export ABC transporter periplasmic protein LptC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_01120
symbol: ARP88452.1
gene_biotype: protein_coding
description:
  Phenylphosphate carboxylase subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_01125
symbol: ARP84979.1
gene_biotype: protein_coding
description:
  D-arabinose 5-phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SIS family. GutQ/KpsF subfamily.


ensembl_gene_id: CAL13_01130
symbol: purT
gene_biotype: protein_coding
description:
  Phosphoribosylglycinamide formyltransferase 2; Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate; Belongs to the PurK/PurT family.


ensembl_gene_id: CAL13_01135
symbol: ARP84981.1
gene_biotype: protein_coding
description:
  Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_01145
symbol: ARP84983.1
gene_biotype: protein_coding
description:
  TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_01150
symbol: ARP84984.1
gene_biotype: protein_coding
description:
  acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_01160
symbol: ARP84986.1
gene_biotype: protein_coding
description:
  3-hydroxyacyl-CoA dehydrogenase; Converts 3-hydroxyadipyl-CoA to beta-ketoadipyl-CoA in phenylacetate degradation; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_01165
symbol: proB
gene_biotype: protein_coding
description:
  Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.


ensembl_gene_id: CAL13_01170
symbol: obg
gene_biotype: protein_coding
description:
  GTPase ObgE; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.


ensembl_gene_id: CAL13_01175
symbol: rpmA
gene_biotype: protein_coding
description:
  50S ribosomal protein L27; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL27 family.


ensembl_gene_id: CAL13_01180
symbol: rplU
gene_biotype: protein_coding
description:
  50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.


ensembl_gene_id: CAL13_01185
symbol: ARP84991.1
gene_biotype: protein_coding
description:
  Octaprenyl diphosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FPP/GGPP synthase family.


ensembl_gene_id: CAL13_01195
symbol: ARP84992.1
gene_biotype: protein_coding
description:
  Trans-aconitate 2-methyltransferase; Catalyzes the S-adenosylmethionine monomethyl esterification of trans-aconitate.


ensembl_gene_id: CAL13_01225
symbol: ARP84996.1
gene_biotype: protein_coding
description:
  Endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_01240
symbol: ARP84999.1
gene_biotype: protein_coding
description:
  3-oxoadipate CoA-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_01255
symbol: queC
gene_biotype: protein_coding
description:
  7-cyano-7-deazaguanine synthase QueC; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Belongs to the QueC family.


ensembl_gene_id: CAL13_01260
symbol: ARP85003.1
gene_biotype: protein_coding
description:
  GNAT family N-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_01265
symbol: ilvD
gene_biotype: protein_coding
description:
  Dihydroxy-acid dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the IlvD/Edd family.


ensembl_gene_id: CAL13_01275
symbol: ARP85005.1
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlgA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_01280
symbol: ARP85006.1
gene_biotype: protein_coding
description:
  5'-3'-deoxyribonucleotidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_01285
symbol: ARP88456.1
gene_biotype: protein_coding
description:
  2'-5' RNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_01290
symbol: ARP88457.1
gene_biotype: protein_coding
description:
  RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_01295
symbol: ARP85007.1
gene_biotype: protein_coding
description:
  Multidrug efflux RND transporter permease subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_01300
symbol: ARP85008.1
gene_biotype: protein_coding
description:
  Efflux transporter periplasmic adaptor subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: CAL13_01320
symbol: ARP85011.1
gene_biotype: protein_coding
description:
  Glycogen phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.


ensembl_gene_id: CAL13_01335
symbol: ARP85014.1
gene_biotype: protein_coding
description:
  DNA repair exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_01415
symbol: ARP85028.1
gene_biotype: protein_coding
description:
  Galactonate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_01420
symbol: ARP85029.1
gene_biotype: protein_coding
description:
  2-dehydro-3-deoxy-6-phosphogalactonate aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_01425
symbol: ARP85030.1
gene_biotype: protein_coding
description:
  2-dehydro-3-deoxygalactonokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_01435
symbol: ARP85032.1
gene_biotype: protein_coding
description:
  N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_01450
symbol: ffh
gene_biotype: protein_coding
description:
  Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual componen [...]


ensembl_gene_id: CAL13_01455
symbol: ARP88460.1
gene_biotype: protein_coding
description:
  Thiamine biosynthesis protein ThiS; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_01460
symbol: ARP85036.1
gene_biotype: protein_coding
description:
  Prolyl aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S33 family.


ensembl_gene_id: CAL13_01465
symbol: trmB
gene_biotype: protein_coding
description:
  tRNA (guanosine(46)-N7)-methyltransferase TrmB; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.


ensembl_gene_id: CAL13_01475
symbol: ARP85038.1
gene_biotype: protein_coding
description:
  Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_01495
symbol: ARP85040.1
gene_biotype: protein_coding
description:
  Thioredoxin reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_01500
symbol: ARP88463.1
gene_biotype: protein_coding
description:
  Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_01505
symbol: ARP85041.1
gene_biotype: protein_coding
description:
  Relaxase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_01510
symbol: ARP85042.1
gene_biotype: protein_coding
description:
  AbrB family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_01515
symbol: ARP85043.1
gene_biotype: protein_coding
description:
  PIN domain nuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_01520
symbol: ARP85044.1
gene_biotype: protein_coding
description:
  DUF3742 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_01525
symbol: ARP85045.1
gene_biotype: protein_coding
description:
  Conjugal transfer protein TraG; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_01535
symbol: ARP85047.1
gene_biotype: protein_coding
description:
  Integrating conjugative element protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_01560
symbol: CAL13_01560
gene_biotype: protein_coding
description:
  IS5/IS1182 family transposase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_01575
symbol: CAL13_01575
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydratase small subunit; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_01580
symbol: ARP85053.1
gene_biotype: protein_coding
description:
  Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_01590
symbol: ARP85055.1
gene_biotype: protein_coding
description:
  Glutathione S-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GST superfamily.


ensembl_gene_id: CAL13_01610
symbol: ARP85059.1
gene_biotype: protein_coding
description:
  Methionine aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_01620
symbol: ARP85061.1
gene_biotype: protein_coding
description:
  Ketosteroid isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_01630
symbol: ARP85062.1
gene_biotype: protein_coding
description:
  IS21 family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_01635
symbol: ARP85063.1
gene_biotype: protein_coding
description:
  ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_01645
symbol: CAL13_01645
gene_biotype: protein_coding
description:
  Hypothetical protein; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_01650
symbol: ARP85065.1
gene_biotype: protein_coding
description:
  Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_01655
symbol: ARP88465.1
gene_biotype: protein_coding
description:
  SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_01665
symbol: ARP85067.1
gene_biotype: protein_coding
description:
  MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_01675
symbol: ARP88466.1
gene_biotype: protein_coding
description:
  Lysine transporter LysE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_01700
symbol: ARP85073.1
gene_biotype: protein_coding
description:
  MerR family DNA-binding transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_01730
symbol: ARP85078.1
gene_biotype: protein_coding
description:
  Disulfide bond formation protein DsbA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_01735
symbol: ARP85079.1
gene_biotype: protein_coding
description:
  Conjugative transfer ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_01740
symbol: ARP85080.1
gene_biotype: protein_coding
description:
  Conjugal transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_01750
symbol: ARP85082.1
gene_biotype: protein_coding
description:
  AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_01770
symbol: ARP85085.1
gene_biotype: protein_coding
description:
  Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_01775
symbol: ARP85086.1
gene_biotype: protein_coding
description:
  PIN domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_01780
symbol: ARP85087.1
gene_biotype: protein_coding
description:
  DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_01790
symbol: CAL13_01790
gene_biotype: protein_coding
description:
  VapC toxin family PIN domain ribonuclease; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_01800
symbol: CAL13_01800
gene_biotype: protein_coding
description:
  IS3 family transposase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_01830
symbol: ARP85095.1
gene_biotype: protein_coding
description:
  Sodium/glutamate symporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_01835
symbol: ARP85096.1
gene_biotype: protein_coding
description:
  Chitinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_01840
symbol: ARP88468.1
gene_biotype: protein_coding
description:
  Chitin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_01845
symbol: ARP85097.1
gene_biotype: protein_coding
description:
  Carbonate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_01875
symbol: ARP85103.1
gene_biotype: protein_coding
description:
  Pilus assembly protein PapC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_01885
symbol: ARP85105.1
gene_biotype: protein_coding
description:
  Pilus assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_01895
symbol: ARP85107.1
gene_biotype: protein_coding
description:
  Diguanylate phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_01910
symbol: CAL13_01910
gene_biotype: protein_coding
description:
  Hypothetical protein; Frameshifted; incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_01940
symbol: ARP85114.1
gene_biotype: protein_coding
description:
  Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_01955
symbol: CAL13_01955
gene_biotype: protein_coding
description:
  Conjugal transfer protein TrbE; Internal stop; incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_01965
symbol: ARP85118.1
gene_biotype: protein_coding
description:
  P-type conjugative transfer protein TrbL; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_01970
symbol: ARP85119.1
gene_biotype: protein_coding
description:
  Conjugal transfer protein TrbF; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_02045
symbol: ARP85131.1
gene_biotype: protein_coding
description:
  DNA topoisomerase III; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_02050
symbol: ARP85132.1
gene_biotype: protein_coding
description:
  Single-stranded DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_02070
symbol: ARP85136.1
gene_biotype: protein_coding
description:
  Addiction module antitoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_02085
symbol: ARP85139.1
gene_biotype: protein_coding
description:
  Coproporphyrinogen III oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_02100
symbol: ARP85142.1
gene_biotype: protein_coding
description:
  Chromosome partitioning protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_02120
symbol: ARP85146.1
gene_biotype: protein_coding
description:
  TIGR04255 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_02150
symbol: ARP85150.1
gene_biotype: protein_coding
description:
  Sulfonate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_02175
symbol: ARP85154.1
gene_biotype: protein_coding
description:
  hydroxymethylglutaryl-CoA lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_02205
symbol: ARP88473.1
gene_biotype: protein_coding
description:
  enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_02210
symbol: ARP85160.1
gene_biotype: protein_coding
description:
  Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_02225
symbol: ARP85163.1
gene_biotype: protein_coding
description:
  Nitronate monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_02240
symbol: ARP85166.1
gene_biotype: protein_coding
description:
  Thiolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_02245
symbol: ARP85167.1
gene_biotype: protein_coding
description:
  TonB-dependent siderophore receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_02250
symbol: ARP85168.1
gene_biotype: protein_coding
description:
  Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_02255
symbol: ARP85169.1
gene_biotype: protein_coding
description:
  RNA polymerase subunit sigma; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: CAL13_02280
symbol: ARP85174.1
gene_biotype: protein_coding
description:
  Amino acid permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_02295
symbol: ARP85177.1
gene_biotype: protein_coding
description:
  Antibiotic biosynthesis monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_02305
symbol: ARP88474.1
gene_biotype: protein_coding
description:
  NADP-dependent succinic semialdehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_02315
symbol: ARP85179.1
gene_biotype: protein_coding
description:
  Transcriptional regulator CynR; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: CAL13_02330
symbol: ARP85181.1
gene_biotype: protein_coding
description:
  Sulfurtransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0176 family.


ensembl_gene_id: CAL13_02335
symbol: ARP85182.1
gene_biotype: protein_coding
description:
  5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase; Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'- methylthioribose and S-ribosylhomocysteine, respectively. Belongs to the PNP/UDP phosphorylase family. MtnN subfamily.


ensembl_gene_id: CAL13_02340
symbol: metG
gene_biotype: protein_coding
description:
  methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.


ensembl_gene_id: CAL13_02350
symbol: ARP85185.1
gene_biotype: protein_coding
description:
  Fe-S-binding ATPase; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.


ensembl_gene_id: CAL13_02375
symbol: ARP85190.1
gene_biotype: protein_coding
description:
  Lysine decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_02380
symbol: ARP85191.1
gene_biotype: protein_coding
description:
  Aminoacetone oxidase family FAD-binding enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_02385
symbol: ARP85192.1
gene_biotype: protein_coding
description:
  ZIP family metal transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_02390
symbol: gcvT
gene_biotype: protein_coding
description:
  Glycine cleavage system protein T; The glycine cleavage system catalyzes the degradation of glycine.


ensembl_gene_id: CAL13_02395
symbol: gcvH
gene_biotype: protein_coding
description:
  Glycine cleavage system protein H; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.


ensembl_gene_id: CAL13_02400
symbol: gcvP
gene_biotype: protein_coding
description:
  Glycine dehydrogenase (aminomethyl-transferring); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.


ensembl_gene_id: CAL13_02415
symbol: ARP85198.1
gene_biotype: protein_coding
description:
  Methylmalonate-semialdehyde dehydrogenase (CoA acylating); Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_02420
symbol: ARP85199.1
gene_biotype: protein_coding
description:
  Aspartate aminotransferase family protein; Catalyzes the formation of pyruvate and beta-alanine from L-alanine and 3-oxopropanoate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: CAL13_02435
symbol: ARP85202.1
gene_biotype: protein_coding
description:
  Dihydrofolate reductase; Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis.


ensembl_gene_id: CAL13_02440
symbol: thyA
gene_biotype: protein_coding
description:
  Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis.


ensembl_gene_id: CAL13_02445
symbol: ARP85204.1
gene_biotype: protein_coding
description:
  Peroxiredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_02450
symbol: coq7
gene_biotype: protein_coding
description:
  Demethoxyubiquinone hydroxylase family protein; Catalyzes the hydroxylation of 2-nonaprenyl-3-methyl-6- methoxy-1,4-benzoquinol during ubiquinone biosynthesis.


ensembl_gene_id: CAL13_02455
symbol: ARP88477.1
gene_biotype: protein_coding
description:
  Vi polysaccharide biosynthesis protein VipA/TviB; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.


ensembl_gene_id: CAL13_02460
symbol: ARP88478.1
gene_biotype: protein_coding
description:
  LPS biosynthesis protein WbpP; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_02465
symbol: ARP85206.1
gene_biotype: protein_coding
description:
  Phosphomannomutase/phosphoglucomutase; Catalyzes the interconversion of alpha-D-mannose 1-phosphate to alpha-D-mannose 6-phosphate and alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_02475
symbol: ARP85207.1
gene_biotype: protein_coding
description:
  Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_02480
symbol: ARP85208.1
gene_biotype: protein_coding
description:
  Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_02485
symbol: ARP85209.1
gene_biotype: protein_coding
description:
  Acid phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_02500
symbol: ARP88480.1
gene_biotype: protein_coding
description:
  C4-dicarboxylate ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_02505
symbol: ARP85212.1
gene_biotype: protein_coding
description:
  NAD-dependent dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_02515
symbol: ARP88481.1
gene_biotype: protein_coding
description:
  Fumarylacetoacetase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_02520
symbol: hmgA
gene_biotype: protein_coding
description:
  Homogentisate 1,2-dioxygenase; Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate.


ensembl_gene_id: CAL13_02530
symbol: mutM
gene_biotype: protein_coding
description:
  DNA-formamidopyrimidine glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates.


ensembl_gene_id: CAL13_02540
symbol: ARP85218.1
gene_biotype: protein_coding
description:
  Outer membrane lipoprotein LolB; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein.


ensembl_gene_id: CAL13_02545
symbol: ispE
gene_biotype: protein_coding
description:
  4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.


ensembl_gene_id: CAL13_02555
symbol: prs
gene_biotype: protein_coding
description:
  Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.


ensembl_gene_id: CAL13_02560
symbol: rplY
gene_biotype: protein_coding
description:
  50S ribosomal protein L25/general stress protein Ctc; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.


ensembl_gene_id: CAL13_02565
symbol: pth
gene_biotype: protein_coding
description:
  aminoacyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.


ensembl_gene_id: CAL13_02570
symbol: ARP85223.1
gene_biotype: protein_coding
description:
  CPBP family intramembrane metalloprotease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_02580
symbol: ychF
gene_biotype: protein_coding
description:
  Redox-regulated ATPase YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.


ensembl_gene_id: CAL13_02595
symbol: ARP85227.1
gene_biotype: protein_coding
description:
  Antibiotic ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_02640
symbol: coaD
gene_biotype: protein_coding
description:
  Pantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.


ensembl_gene_id: CAL13_02645
symbol: ARP85235.1
gene_biotype: protein_coding
description:
  16S rRNA (guanine(966)-N(2))-methyltransferase RsmD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_02650
symbol: ftsY
gene_biotype: protein_coding
description:
  Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components.


ensembl_gene_id: CAL13_02655
symbol: ARP85236.1
gene_biotype: protein_coding
description:
  Phosphinothricin acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_02665
symbol: ribB-2
gene_biotype: protein_coding
description:
  3,4-dihydroxy-2-butanone-4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.


ensembl_gene_id: CAL13_02670
symbol: ribH
gene_biotype: protein_coding
description:
  6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.


ensembl_gene_id: CAL13_02675
symbol: nusB
gene_biotype: protein_coding
description:
  N utilization substance protein B; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.


ensembl_gene_id: CAL13_02680
symbol: thiL
gene_biotype: protein_coding
description:
  Thiamine-phosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family.


ensembl_gene_id: CAL13_02685
symbol: ARP88486.1
gene_biotype: protein_coding
description:
  Phosphatidylglycerophosphatase A; Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG).


ensembl_gene_id: CAL13_02690
symbol: ARP85242.1
gene_biotype: protein_coding
description:
  Damage-inducible protein CinA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CinA family.


ensembl_gene_id: CAL13_02695
symbol: pyrF
gene_biotype: protein_coding
description:
  Orotidine-5'-phosphate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the OMP decarboxylase family. Type 2 subfamily.


ensembl_gene_id: CAL13_02705
symbol: ARP85245.1
gene_biotype: protein_coding
description:
  Diacylglycerol kinase; Recycling of diacylglycerol produced during the turnover of membrane phospholipid.


ensembl_gene_id: CAL13_02715
symbol: ARP85247.1
gene_biotype: protein_coding
description:
  L-idonate 5-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_02725
symbol: ARP85249.1
gene_biotype: protein_coding
description:
  TRAP transporter permease DctQ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_02735
symbol: ARP85251.1
gene_biotype: protein_coding
description:
  NAD(P)-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_02740
symbol: ARP85252.1
gene_biotype: protein_coding
description:
  2-hydroxyhepta-2,4-diene-1,7-dioate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_02750
symbol: ARP88487.1
gene_biotype: protein_coding
description:
  Bifunctional D-altronate/D-mannonate dehydratase; Starvation-sensing protein; maybe involved in homoserine lactone degradation; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_02755
symbol: ARP85254.1
gene_biotype: protein_coding
description:
  Malate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LDH2/MDH2 oxidoreductase family.


ensembl_gene_id: CAL13_02775
symbol: groL
gene_biotype: protein_coding
description:
  Chaperonin GroL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.


ensembl_gene_id: CAL13_02780
symbol: groS
gene_biotype: protein_coding
description:
  Co-chaperone GroES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.


ensembl_gene_id: CAL13_02805
symbol: CAL13_02805
gene_biotype: protein_coding
description:
  Hypothetical protein; Frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_02830
symbol: ARP85267.1
gene_biotype: protein_coding
description:
  Cysteine hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_02840
symbol: ARP85269.1
gene_biotype: protein_coding
description:
  Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_02875
symbol: ARP85276.1
gene_biotype: protein_coding
description:
  Gamma-glutamyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_02895
symbol: ARP85279.1
gene_biotype: protein_coding
description:
  3-phosphoglycerate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: CAL13_02900
symbol: ARP85280.1
gene_biotype: protein_coding
description:
  Cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_02920
symbol: ARP85283.1
gene_biotype: protein_coding
description:
  Receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_02930
symbol: ARP85285.1
gene_biotype: protein_coding
description:
  Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_02935
symbol: ARP85286.1
gene_biotype: protein_coding
description:
  Prevent-host-death protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_02940
symbol: ARP85287.1
gene_biotype: protein_coding
description:
  VapC toxin family PIN domain ribonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_02990
symbol: ARP85295.1
gene_biotype: protein_coding
description:
  Member of the SMR family of proton-dependent drug efflux transporters; quaternary ammonium compound efflux pump; confers resistance to cetylpyridinium, cetyldimethylethyl ammonium and cetrimide cations; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_03000
symbol: ARP88493.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_03025
symbol: ARP85301.1
gene_biotype: protein_coding
description:
  Dihydrodipicolinate synthase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DapA family.


ensembl_gene_id: CAL13_03040
symbol: ARP85304.1
gene_biotype: protein_coding
description:
  NAD(P)-dependent oxidoreductase; Converts glucose to D-glucono-1,5 lactone; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_03045
symbol: ARP85305.1
gene_biotype: protein_coding
description:
  HAD family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_03055
symbol: ARP85307.1
gene_biotype: protein_coding
description:
  Phosphoglycolate phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_03065
symbol: ARP85309.1
gene_biotype: protein_coding
description:
  ATP-dependent endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_03085
symbol: CAL13_03085
gene_biotype: protein_coding
description:
  LysR family transcriptional regulator; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_03090
symbol: ARP85312.1
gene_biotype: protein_coding
description:
  FAD-binding oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_03105
symbol: ARP85314.1
gene_biotype: protein_coding
description:
  2-deoxy-D-gluconate 3-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_03110
symbol: ARP85315.1
gene_biotype: protein_coding
description:
  3-oxoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_03130
symbol: ARP85319.1
gene_biotype: protein_coding
description:
  Microcin ABC transporter ATP-binding protein; With YejAEF is involved in resistance to microcin C; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_03140
symbol: ARP85321.1
gene_biotype: protein_coding
description:
  AMP-dependent synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_03155
symbol: ARP85324.1
gene_biotype: protein_coding
description:
  Twin-arginine translocation pathway signal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_03160
symbol: ARP85325.1
gene_biotype: protein_coding
description:
  Thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_03165
symbol: ARP85326.1
gene_biotype: protein_coding
description:
  Zinc-binding dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_03170
symbol: ARP85327.1
gene_biotype: protein_coding
description:
  Deacylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_03195
symbol: ARP85332.1
gene_biotype: protein_coding
description:
  MBL fold hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_03210
symbol: livF
gene_biotype: protein_coding
description:
  Branched-chain amino acid ABC transporter ATP-binding protein; With LivGHMJ and LivGHMK is part of the high-affinity branched-chain amino acid transport system; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_03235
symbol: ARP88497.1
gene_biotype: protein_coding
description:
  Gamma carboxymuconolactone decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_03240
symbol: ARP85339.1
gene_biotype: protein_coding
description:
  Hydroxyacid oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_03265
symbol: ARP88498.1
gene_biotype: protein_coding
description:
  Thiamine pyrophosphate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_03275
symbol: ARP85345.1
gene_biotype: protein_coding
description:
  NIPSNAP family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_03295
symbol: ARP85349.1
gene_biotype: protein_coding
description:
  Polyamine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.


ensembl_gene_id: CAL13_03305
symbol: ARP85351.1
gene_biotype: protein_coding
description:
  Tricarboxylate-binding receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_03320
symbol: ARP85353.1
gene_biotype: protein_coding
description:
  Alkylhydroperoxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_03340
symbol: ARP88500.1
gene_biotype: protein_coding
description:
  RNA polymerase subunit sigma-24; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family.


ensembl_gene_id: CAL13_03355
symbol: ARP85359.1
gene_biotype: protein_coding
description:
  Aldehyde-activating protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_03360
symbol: ARP85360.1
gene_biotype: protein_coding
description:
  Nuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_03375
symbol: ARP85363.1
gene_biotype: protein_coding
description:
  Glycine/betaine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_03380
symbol: ARP85364.1
gene_biotype: protein_coding
description:
  Choline ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_03385
symbol: ARP88501.1
gene_biotype: protein_coding
description:
  Glycine/betaine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_03390
symbol: ARP85365.1
gene_biotype: protein_coding
description:
  Glycine/betaine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_03410
symbol: ARP85369.1
gene_biotype: protein_coding
description:
  Amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_03425
symbol: ARP85372.1
gene_biotype: protein_coding
description:
  Cysteine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_03430
symbol: ARP85373.1
gene_biotype: protein_coding
description:
  Aspartate aminotransferase; Catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_03485
symbol: ARP88502.1
gene_biotype: protein_coding
description:
  hydroxymethylglutaryl-CoA reductase, degradative; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HMG-CoA reductase family.


ensembl_gene_id: CAL13_03505
symbol: ARP85387.1
gene_biotype: protein_coding
description:
  Glutamine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: CAL13_03525
symbol: ARP85391.1
gene_biotype: protein_coding
description:
  Formimidoylglutamate deiminase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_03530
symbol: ARP85392.1
gene_biotype: protein_coding
description:
  N-formylglutamate deformylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_03535
symbol: ARP85393.1
gene_biotype: protein_coding
description:
  Dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_03545
symbol: ARP85394.1
gene_biotype: protein_coding
description:
  Permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_03570
symbol: ARP85398.1
gene_biotype: protein_coding
description:
  NADH:flavin oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_03590
symbol: ARP85402.1
gene_biotype: protein_coding
description:
  Amino acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_03615
symbol: ARP88505.1
gene_biotype: protein_coding
description:
  MBL fold metallo-hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_03630
symbol: ARP88506.1
gene_biotype: protein_coding
description:
  Redox-sensitive transcriptional activator SoxR; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_03640
symbol: ARP85409.1
gene_biotype: protein_coding
description:
  Drug:proton antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_03655
symbol: ARP85412.1
gene_biotype: protein_coding
description:
  2-methylcitrate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_03665
symbol: ARP85414.1
gene_biotype: protein_coding
description:
  Flavin reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_03670
symbol: ARP85415.1
gene_biotype: protein_coding
description:
  Twin-arginine translocation pathway signal; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_03680
symbol: ARP85417.1
gene_biotype: protein_coding
description:
  2-pyrone-4,6-dicarboxylate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_03690
symbol: ARP85419.1
gene_biotype: protein_coding
description:
  2-oxo-hepta-3-ene-1,7-dioic acid hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_03700
symbol: ARP88508.1
gene_biotype: protein_coding
description:
  Haloacid dehalogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_03705
symbol: ARP85421.1
gene_biotype: protein_coding
description:
  IolC myo-catabolism protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_03730
symbol: ARP85426.1
gene_biotype: protein_coding
description:
  Ectoine/hydroxyectoine ABC transporter substrate-binding protein EhuB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_03750
symbol: ARP85430.1
gene_biotype: protein_coding
description:
  Succinylglutamate desuccinylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_03755
symbol: ARP85431.1
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease III; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_03780
symbol: ARP85434.1
gene_biotype: protein_coding
description:
  Dipeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_03785
symbol: ARP85435.1
gene_biotype: protein_coding
description:
  D-amino-acid oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_03800
symbol: ARP85436.1
gene_biotype: protein_coding
description:
  Sulfite oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_03810
symbol: ARP85438.1
gene_biotype: protein_coding
description:
  RNA signal recognition particle; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_03815
symbol: ARP85439.1
gene_biotype: protein_coding
description:
  Aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_03890
symbol: ARP85451.1
gene_biotype: protein_coding
description:
  Photosystem reaction center subunit H; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_03895
symbol: ARP85452.1
gene_biotype: protein_coding
description:
  Citrate-proton symporter; Is involved in the uptake of citrate and the transport of protons into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_03900
symbol: ARP88516.1
gene_biotype: protein_coding
description:
  Molybdenum ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_03950
symbol: ARP85461.1
gene_biotype: protein_coding
description:
  Alkene reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_03960
symbol: ARP85463.1
gene_biotype: protein_coding
description:
  Glucokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_03970
symbol: CAL13_03970
gene_biotype: protein_coding
description:
  Peptidase M23; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_03975
symbol: ARP85464.1
gene_biotype: protein_coding
description:
  Ribonuclease BN; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_04030
symbol: ARP85475.1
gene_biotype: protein_coding
description:
  Co-chaperone GroES; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_04035
symbol: ARP85476.1
gene_biotype: protein_coding
description:
  Chaperonin GroL; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_04045
symbol: ARP85478.1
gene_biotype: protein_coding
description:
  GGDEF domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_04050
symbol: ARP85479.1
gene_biotype: protein_coding
description:
  Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_04055
symbol: ARP88519.1
gene_biotype: protein_coding
description:
  Cation-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_04065
symbol: ARP88520.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_04070
symbol: ARP85481.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: CAL13_04090
symbol: ARP85484.1
gene_biotype: protein_coding
description:
  Microcystin degradation protein MlrC; Involved in peptidolytic degradation of cyclic heptapeptide hepatotoxin microcystin (MC); Belongs to the peptidase M81 family.


ensembl_gene_id: CAL13_04095
symbol: ARP85485.1
gene_biotype: protein_coding
description:
  Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_04100
symbol: ARP85486.1
gene_biotype: protein_coding
description:
  DUF378 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_04120
symbol: ARP85488.1
gene_biotype: protein_coding
description:
  protein-L-isoaspartate O-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_04125
symbol: ARP85489.1
gene_biotype: protein_coding
description:
  Acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_04130
symbol: ARP85490.1
gene_biotype: protein_coding
description:
  GDSL family lipase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_04135
symbol: ARP85491.1
gene_biotype: protein_coding
description:
  N-carbamoyl-D-amino-acid hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_04145
symbol: ARP88524.1
gene_biotype: protein_coding
description:
  DUF445 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_04155
symbol: ARP85494.1
gene_biotype: protein_coding
description:
  NAD(P)H:quinone oxidoreductase, type IV; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_04170
symbol: ARP85497.1
gene_biotype: protein_coding
description:
  Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_04185
symbol: CAL13_04185
gene_biotype: protein_coding
description:
  Glyoxalase/bleomycin resistance/extradiol dioxygenase family protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_04200
symbol: ARP85502.1
gene_biotype: protein_coding
description:
  Cytochrome; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_04205
symbol: ARP85503.1
gene_biotype: protein_coding
description:
  DNA starvation/stationary phase protection protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Dps family.


ensembl_gene_id: CAL13_04225
symbol: ARP85507.1
gene_biotype: protein_coding
description:
  Tat pathway signal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_04240
symbol: ARP85510.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: CAL13_04265
symbol: ARP85515.1
gene_biotype: protein_coding
description:
  Hemerythrin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_04290
symbol: ARP85520.1
gene_biotype: protein_coding
description:
  LPS biosynthesis transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_04295
symbol: ARP85521.1
gene_biotype: protein_coding
description:
  LPS biosynthesis glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_04300
symbol: ARP85522.1
gene_biotype: protein_coding
description:
  Glycosyl transferase family 2; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_04305
symbol: ARP85523.1
gene_biotype: protein_coding
description:
  Carbamoyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_04325
symbol: ARP85527.1
gene_biotype: protein_coding
description:
  Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_04345
symbol: ARP85531.1
gene_biotype: protein_coding
description:
  Lytic transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_04355
symbol: ARP85533.1
gene_biotype: protein_coding
description:
  Glutathione-dependent formaldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_04390
symbol: ARP85540.1
gene_biotype: protein_coding
description:
  Nitrate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_04405
symbol: CAL13_04405
gene_biotype: protein_coding
description:
  Hypothetical protein; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: CAL13_04410
symbol: ARP85543.1
gene_biotype: protein_coding
description:
  Mandelate racemase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the mandelate racemase/muconate lactonizing enzyme family.


ensembl_gene_id: CAL13_04420
symbol: ARP85545.1
gene_biotype: protein_coding
description:
  Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_04425
symbol: zwf
gene_biotype: protein_coding
description:
  Glucose-6-phosphate dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.


ensembl_gene_id: CAL13_04430
symbol: ARP88525.1
gene_biotype: protein_coding
description:
  6-phosphogluconate dehydrogenase (decarboxylating); Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_04435
symbol: tal
gene_biotype: protein_coding
description:
  Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the GPI family.


ensembl_gene_id: CAL13_04440
symbol: ARP85548.1
gene_biotype: protein_coding
description:
  Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the transketolase family.


ensembl_gene_id: CAL13_04445
symbol: ARP85549.1
gene_biotype: protein_coding
description:
  Chromosome partitioning protein ParA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_04460
symbol: ARP85551.1
gene_biotype: protein_coding
description:
  Methylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the methyltransferase superfamily.


ensembl_gene_id: CAL13_04470
symbol: ARP85552.1
gene_biotype: protein_coding
description:
  Peptidase A8; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_04475
symbol: ARP88528.1
gene_biotype: protein_coding
description:
  Fatty acid hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_04480
symbol: ARP85553.1
gene_biotype: protein_coding
description:
  Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_04490
symbol: CAL13_04490
gene_biotype: protein_coding
description:
  Chemotaxis protein CheB; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_04510
symbol: ARP85557.1
gene_biotype: protein_coding
description:
  Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: CAL13_04535
symbol: ARP85562.1
gene_biotype: protein_coding
description:
  Type VI secretion system-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_04540
symbol: ARP85563.1
gene_biotype: protein_coding
description:
  EvpB family type VI secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_04550
symbol: ARP85565.1
gene_biotype: protein_coding
description:
  Type VI secretion system lysozyme; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_04555
symbol: ARP85566.1
gene_biotype: protein_coding
description:
  Type VI secretion system protein ImpG; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_04565
symbol: ARP85568.1
gene_biotype: protein_coding
description:
  ClpV1 family T6SS ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_04585
symbol: ARP85572.1
gene_biotype: protein_coding
description:
  Type VI secretion system-associated lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_04610
symbol: ARP85577.1
gene_biotype: protein_coding
description:
  Iron ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_04615
symbol: ARP85578.1
gene_biotype: protein_coding
description:
  Iron-siderophore ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_04620
symbol: cpoB
gene_biotype: protein_coding
description:
  Tol-pal system protein YbgF; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family.


ensembl_gene_id: CAL13_04625
symbol: ARP85580.1
gene_biotype: protein_coding
description:
  Peptidoglycan-associated lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_04630
symbol: tolB
gene_biotype: protein_coding
description:
  Tol-Pal system beta propeller repeat protein TolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.


ensembl_gene_id: CAL13_04635
symbol: ARP85582.1
gene_biotype: protein_coding
description:
  Protein TolA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_04640
symbol: ARP85583.1
gene_biotype: protein_coding
description:
  Protein TolR; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_04645
symbol: tolQ
gene_biotype: protein_coding
description:
  Protein TolQ; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.


ensembl_gene_id: CAL13_04650
symbol: ARP88530.1
gene_biotype: protein_coding
description:
  Tol-pal system-associated acyl-CoA thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_04655
symbol: proS
gene_biotype: protein_coding
description:
  proline--tRNA ligase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacy [...]


ensembl_gene_id: CAL13_04660
symbol: rppH
gene_biotype: protein_coding
description:
  RNA pyrophosphohydrolase; Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage; Belongs to the Nudix hydrolase family. RppH subfamily.


ensembl_gene_id: CAL13_04665
symbol: ARP85587.1
gene_biotype: protein_coding
description:
  DNA-binding response regulator; Transcriptional activator of tricarboxylate transport system genes; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_04670
symbol: ARP88531.1
gene_biotype: protein_coding
description:
  Sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_04675
symbol: ARP88532.1
gene_biotype: protein_coding
description:
  Tripartite tricarboxylate transporter TctB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_04685
symbol: ARP85589.1
gene_biotype: protein_coding
description:
  Glyoxylate/hydroxypyruvate reductase A; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_04705
symbol: ARP85593.1
gene_biotype: protein_coding
description:
  Tricarboxylate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_04715
symbol: ARP85594.1
gene_biotype: protein_coding
description:
  Cell division protein ZapA; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.


ensembl_gene_id: CAL13_04730
symbol: lgt
gene_biotype: protein_coding
description:
  Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.


ensembl_gene_id: CAL13_04745
symbol: ARP88536.1
gene_biotype: protein_coding
description:
  4-hydroxyphenylpyruvate dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_04790
symbol: ARP85599.1
gene_biotype: protein_coding
description:
  Peptidase M20; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_04820
symbol: mraZ
gene_biotype: protein_coding
description:
  Cell division/cell wall cluster transcriptional repressor MraZ; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MraZ family.


ensembl_gene_id: CAL13_04825
symbol: rsmH
gene_biotype: protein_coding
description:
  16S rRNA (cytosine(1402)-N(4))-methyltransferase; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.


ensembl_gene_id: CAL13_04830
symbol: ftsL
gene_biotype: protein_coding
description:
  Cell division protein FtsL; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic.


ensembl_gene_id: CAL13_04835
symbol: ftsI
gene_biotype: protein_coding
description:
  Cell division protein; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum.


ensembl_gene_id: CAL13_04840
symbol: murF
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily.


ensembl_gene_id: CAL13_04845
symbol: mraY
gene_biotype: protein_coding
description:
  phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.


ensembl_gene_id: CAL13_04850
symbol: murD
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.


ensembl_gene_id: CAL13_04855
symbol: ftsW
gene_biotype: protein_coding
description:
  Putative lipid II flippase FtsW; Peptidoglycan polymerase that is essential for cell division. Belongs to the SEDS family. FtsW subfamily.


ensembl_gene_id: CAL13_04860
symbol: murG
gene_biotype: protein_coding
description:
  Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.


ensembl_gene_id: CAL13_04870
symbol: ddl
gene_biotype: protein_coding
description:
  D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.


ensembl_gene_id: CAL13_04875
symbol: ftsQ
gene_biotype: protein_coding
description:
  Cell division protein FtsQ; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly.


ensembl_gene_id: CAL13_04880
symbol: ftsA
gene_biotype: protein_coding
description:
  Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.


ensembl_gene_id: CAL13_04885
symbol: ftsZ
gene_biotype: protein_coding
description:
  Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.


ensembl_gene_id: CAL13_04890
symbol: lpxC
gene_biotype: protein_coding
description:
  UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the LpxC family.


ensembl_gene_id: CAL13_04895
symbol: ARP88540.1
gene_biotype: protein_coding
description:
  Flagellar hook-length control protein FliK; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_04905
symbol: secA
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. Belongs to the SecA family.


ensembl_gene_id: CAL13_04925
symbol: ARP85622.1
gene_biotype: protein_coding
description:
  Acetolactate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TPP enzyme family.


ensembl_gene_id: CAL13_04935
symbol: ARP85624.1
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: CAL13_04945
symbol: ARP88541.1
gene_biotype: protein_coding
description:
  Gamma-glutamylcyclotransferase; Catalyzes the cleavage of glutathione into 5-oxo-L-proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides; Belongs to the gamma-glutamylcyclotransferase family.


ensembl_gene_id: CAL13_04955
symbol: ARP85627.1
gene_biotype: protein_coding
description:
  acyl-CoA thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_04960
symbol: ARP85628.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0324 family.


ensembl_gene_id: CAL13_04970
symbol: ARP85630.1
gene_biotype: protein_coding
description:
  Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_04975
symbol: ARP85631.1
gene_biotype: protein_coding
description:
  Long-chain fatty acid--CoA ligase; Activates fatty acids by binding to coenzyme A; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_04980
symbol: ARP85632.1
gene_biotype: protein_coding
description:
  Inositol monophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the inositol monophosphatase superfamily.


ensembl_gene_id: CAL13_04985
symbol: ARP85633.1
gene_biotype: protein_coding
description:
  FAD-dependent cmnm(5)s(2)U34 oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_04990
symbol: ARP85634.1
gene_biotype: protein_coding
description:
  Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 31 family.


ensembl_gene_id: CAL13_04995
symbol: metN
gene_biotype: protein_coding
description:
  Phosphate ABC transporter ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.


ensembl_gene_id: CAL13_05000
symbol: ARP85636.1
gene_biotype: protein_coding
description:
  DL-methionine transporter permease subunit; Part of the MetNIQ methionine uptake system; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_05005
symbol: ARP85637.1
gene_biotype: protein_coding
description:
  Metal ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the nlpA lipoprotein family.


ensembl_gene_id: CAL13_05050
symbol: ARP85645.1
gene_biotype: protein_coding
description:
  EscD/YscD/HrpQ family type III secretion system inner membrane ring protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_05055
symbol: ARP85646.1
gene_biotype: protein_coding
description:
  EscV/YscV/HrcV family type III secretion system export apparatus protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_05100
symbol: ARP85655.1
gene_biotype: protein_coding
description:
  EscJ/YscJ/HrcJ family type III secretion inner membrane ring protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_05115
symbol: ARP85658.1
gene_biotype: protein_coding
description:
  EscN/YscN/HrcN family type III secretion system ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_05140
symbol: ssaR
gene_biotype: protein_coding
description:
  EscR/YscR/HrcR family type III secretion system export apparatus protein; Part of a set of proteins involved in the infection of eukaryotic cells; in plant pathogens involved in the hypersensitivity response; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_05145
symbol: ARP88542.1
gene_biotype: protein_coding
description:
  EscS/YscS/HrcS family type III secretion system export apparatus protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_05150
symbol: ARP85664.1
gene_biotype: protein_coding
description:
  EscT/YscT/HrcT family type III secretion system export apparatus protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_05160
symbol: ARP85666.1
gene_biotype: protein_coding
description:
  EscC/YscC/HrcC family type III secretion system outer membrane ring protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_05190
symbol: ARP85672.1
gene_biotype: protein_coding
description:
  Sulfatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_05195
symbol: ARP85673.1
gene_biotype: protein_coding
description:
  AsmA family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_05220
symbol: ARP85677.1
gene_biotype: protein_coding
description:
  3-oxoadipate enol-lactonase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_05225
symbol: ARP85678.1
gene_biotype: protein_coding
description:
  UDP-N-acetyl-D-galactosamine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.


ensembl_gene_id: CAL13_05245
symbol: ARP85682.1
gene_biotype: protein_coding
description:
  Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_05255
symbol: ARP88543.1
gene_biotype: protein_coding
description:
  Sugar ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_05270
symbol: ARP88544.1
gene_biotype: protein_coding
description:
  Pectate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_05280
symbol: ARP85687.1
gene_biotype: protein_coding
description:
  4-aminobutyrate--2-oxoglutarate transaminase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: CAL13_05295
symbol: ARP85690.1
gene_biotype: protein_coding
description:
  3-phenylpropionate dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_05300
symbol: ARP88545.1
gene_biotype: protein_coding
description:
  Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_05305
symbol: ARP88546.1
gene_biotype: protein_coding
description:
  (2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_05315
symbol: ARP85692.1
gene_biotype: protein_coding
description:
  D-glycerate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_05320
symbol: ARP85693.1
gene_biotype: protein_coding
description:
  Aromatic ring-hydroxylating dioxygenase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_05330
symbol: ARP85694.1
gene_biotype: protein_coding
description:
  Acetolactate synthase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_05335
symbol: ARP85695.1
gene_biotype: protein_coding
description:
  Aldehyde dehydrogenase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_05345
symbol: ARP88549.1
gene_biotype: protein_coding
description:
  LD-carboxypeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_05360
symbol: CAL13_05360
gene_biotype: protein_coding
description:
  Transcriptional regulator; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_05365
symbol: ARP85697.1
gene_biotype: protein_coding
description:
  Thiol:disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_05375
symbol: ARP88551.1
gene_biotype: protein_coding
description:
  Cysteine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_05380
symbol: ARP85699.1
gene_biotype: protein_coding
description:
  Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: CAL13_05385
symbol: ARP85700.1
gene_biotype: protein_coding
description:
  Polyisoprenoid-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0312 family.


ensembl_gene_id: CAL13_05395
symbol: ARP85702.1
gene_biotype: protein_coding
description:
  NADP(H)-dependent aldo-keto reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_05400
symbol: ARP88552.1
gene_biotype: protein_coding
description:
  Peptidase M16; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase M16 family.


ensembl_gene_id: CAL13_05435
symbol: ARP85707.1
gene_biotype: protein_coding
description:
  NADP-dependent isocitrate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_05450
symbol: ARP85710.1
gene_biotype: protein_coding
description:
  Two-component system response regulator KdpE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_05460
symbol: kdpC
gene_biotype: protein_coding
description:
  Potassium-transporting ATPase subunit C; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP-binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB/KdpC/ATP ternary complex.


ensembl_gene_id: CAL13_05465
symbol: kdpB
gene_biotype: protein_coding
description:
  Potassium-transporting ATPase subunit B; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system. Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IA subfamily.


ensembl_gene_id: CAL13_05470
symbol: kdpA
gene_biotype: protein_coding
description:
  Potassium-transporting ATPase subunit KdpA; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane.


ensembl_gene_id: CAL13_05475
symbol: ARP85715.1
gene_biotype: protein_coding
description:
  Potassium-transporting ATPase subunit F; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_05485
symbol: ARP85716.1
gene_biotype: protein_coding
description:
  Cation acetate symporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.


ensembl_gene_id: CAL13_05490
symbol: ARP85717.1
gene_biotype: protein_coding
description:
  QacE family quaternary ammonium compound efflux SMR transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_05495
symbol: ARP85718.1
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_05500
symbol: ARP85719.1
gene_biotype: protein_coding
description:
  Thioredoxin-disulfide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_05505
symbol: ARP85720.1
gene_biotype: protein_coding
description:
  Cell division protein FtsK; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_05510
symbol: lolA
gene_biotype: protein_coding
description:
  Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).


ensembl_gene_id: CAL13_05515
symbol: ARP85722.1
gene_biotype: protein_coding
description:
  Reactive intermediate/imine deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_05520
symbol: ARP85723.1
gene_biotype: protein_coding
description:
  D-aminoacylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_05525
symbol: ARP85724.1
gene_biotype: protein_coding
description:
  MurR/RpiR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_05530
symbol: ARP88556.1
gene_biotype: protein_coding
description:
  Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.


ensembl_gene_id: CAL13_05535
symbol: dppD
gene_biotype: protein_coding
description:
  DppD and DppF are the ATP-binding components of the ABC dipeptide transport system DppABCDF; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_05540
symbol: ARP85726.1
gene_biotype: protein_coding
description:
  Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_05545
symbol: ARP85727.1
gene_biotype: protein_coding
description:
  Peptide ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_05555
symbol: ARP85729.1
gene_biotype: protein_coding
description:
  Amino acid deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_05560
symbol: ARP85730.1
gene_biotype: protein_coding
description:
  Recombination factor protein RarA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_05565
symbol: serS
gene_biotype: protein_coding
description:
  serine--tRNA ligase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).


ensembl_gene_id: CAL13_05625
symbol: ARP85742.1
gene_biotype: protein_coding
description:
  Cytochrome d ubiquinol oxidase subunit II; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_05630
symbol: ARP85743.1
gene_biotype: protein_coding
description:
  Cytochrome ubiquinol oxidase subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_05640
symbol: ARP85745.1
gene_biotype: protein_coding
description:
  Acetate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_05645
symbol: ARP85746.1
gene_biotype: protein_coding
description:
  Phosphoketolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_05650
symbol: ARP85747.1
gene_biotype: protein_coding
description:
  2-methylaconitate cis-trans isomerase PrpF; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_05670
symbol: ARP85751.1
gene_biotype: protein_coding
description:
  Aldo/keto reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_05695
symbol: ARP85756.1
gene_biotype: protein_coding
description:
  Cytochrome o ubiquinol oxidase subunit IV; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_05700
symbol: ARP85757.1
gene_biotype: protein_coding
description:
  Cytochrome o ubiquinol oxidase subunit III; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_05705
symbol: ARP85758.1
gene_biotype: protein_coding
description:
  Cytochrome o ubiquinol oxidase subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heme-copper respiratory oxidase family.


ensembl_gene_id: CAL13_05710
symbol: ARP85759.1
gene_biotype: protein_coding
description:
  Ubiquinol oxidase subunit II; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_05730
symbol: ARP88557.1
gene_biotype: protein_coding
description:
  Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_05760
symbol: ARP85768.1
gene_biotype: protein_coding
description:
  DNA packaging protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_05765
symbol: ARP85769.1
gene_biotype: protein_coding
description:
  Terminase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_05770
symbol: ARP85770.1
gene_biotype: protein_coding
description:
  TerS protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_05780
symbol: CAL13_05780
gene_biotype: protein_coding
description:
  Hypothetical protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_05785
symbol: ARP85772.1
gene_biotype: protein_coding
description:
  Histone H1; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_05790
symbol: ARP85773.1
gene_biotype: protein_coding
description:
  Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_05795
symbol: ARP85774.1
gene_biotype: protein_coding
description:
  Phage major capsid protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_05805
symbol: ARP85775.1
gene_biotype: protein_coding
description:
  DNA primase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_05850
symbol: ARP85783.1
gene_biotype: protein_coding
description:
  3-hydroxybutyrate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_05855
symbol: ARP85784.1
gene_biotype: protein_coding
description:
  Peroxide stress protein YaaA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0246 family.


ensembl_gene_id: CAL13_05870
symbol: ARP85787.1
gene_biotype: protein_coding
description:
  Acetolactate synthase small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_05875
symbol: ilvC
gene_biotype: protein_coding
description:
  Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate.


ensembl_gene_id: CAL13_05880
symbol: psd
gene_biotype: protein_coding
description:
  Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).


ensembl_gene_id: CAL13_05885
symbol: ARP85790.1
gene_biotype: protein_coding
description:
  CDP-diacylglycerol--serine O-phosphatidyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: CAL13_05895
symbol: rpsO
gene_biotype: protein_coding
description:
  30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.


ensembl_gene_id: CAL13_05900
symbol: pnp
gene_biotype: protein_coding
description:
  Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.


ensembl_gene_id: CAL13_05910
symbol: ARP85793.1
gene_biotype: protein_coding
description:
  Threonine ammonia-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_05925
symbol: mdoD
gene_biotype: protein_coding
description:
  Glucan biosynthesis protein D; Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs).


ensembl_gene_id: CAL13_05955
symbol: ARP85800.1
gene_biotype: protein_coding
description:
  CoA transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_05975
symbol: ARP85804.1
gene_biotype: protein_coding
description:
  Small permease of tripartite tricarboxylate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_05985
symbol: ARP85806.1
gene_biotype: protein_coding
description:
  Serine--glyoxylate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_06015
symbol: ARP85811.1
gene_biotype: protein_coding
description:
  Thiamine pyrophosphate-requiring protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TPP enzyme family.


ensembl_gene_id: CAL13_06020
symbol: ARP85812.1
gene_biotype: protein_coding
description:
  NAD(P)H-quinone oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_06025
symbol: tpiA
gene_biotype: protein_coding
description:
  Triose-phosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.


ensembl_gene_id: CAL13_06030
symbol: ARP85814.1
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.


ensembl_gene_id: CAL13_06065
symbol: aceE
gene_biotype: protein_coding
description:
  Pyruvate dehydrogenase (acetyl-transferring), homodimeric type; E1 component; part of pyruvate dehydrogenase; forms a complex with DlaT and LpdC; frameshifted; internal stop; incomplete; partial on complete genome; missing start and stop; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the major facilitator superfamily.


ensembl_gene_id: CAL13_06075
symbol: ARP85821.1
gene_biotype: protein_coding
description:
  Thiopurine S-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_06105
symbol: ARP85826.1
gene_biotype: protein_coding
description:
  Betaine-aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: CAL13_06130
symbol: ARP85831.1
gene_biotype: protein_coding
description:
  Lactate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LDH2/MDH2 oxidoreductase family.


ensembl_gene_id: CAL13_06155
symbol: nuoA
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit A; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family.


ensembl_gene_id: CAL13_06160
symbol: nuoB
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit B; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: CAL13_06165
symbol: nuoC
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit C; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family.


ensembl_gene_id: CAL13_06170
symbol: nuoD
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family.


ensembl_gene_id: CAL13_06175
symbol: ARP85839.1
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit E; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_06180
symbol: ARP85840.1
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family.


ensembl_gene_id: CAL13_06185
symbol: ARP85841.1
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit G; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family.


ensembl_gene_id: CAL13_06190
symbol: nuoH
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit H; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone.


ensembl_gene_id: CAL13_06195
symbol: nuoI
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: CAL13_06200
symbol: ARP85844.1
gene_biotype: protein_coding
description:
  NADH:ubiquinone oxidoreductase subunit J; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: CAL13_06205
symbol: nuoK
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit K; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family.


ensembl_gene_id: CAL13_06210
symbol: ARP85846.1
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit L; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_06215
symbol: ARP85847.1
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit M; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_06220
symbol: nuoN
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family.


ensembl_gene_id: CAL13_06240
symbol: ARP85852.1
gene_biotype: protein_coding
description:
  Phosphoserine phosphatase SerB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_06245
symbol: mfd
gene_biotype: protein_coding
description:
  Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.


ensembl_gene_id: CAL13_06250
symbol: ispD
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP).


ensembl_gene_id: CAL13_06255
symbol: ispF
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP).


ensembl_gene_id: CAL13_06260
symbol: ahpD
gene_biotype: protein_coding
description:
  Carboxymuconolactone decarboxylase family protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.


ensembl_gene_id: CAL13_06265
symbol: ARP85856.1
gene_biotype: protein_coding
description:
  Alkyl hydroperoxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_06275
symbol: ARP85858.1
gene_biotype: protein_coding
description:
  Two-component system response regulator OmpR; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_06285
symbol: ARP85860.1
gene_biotype: protein_coding
description:
  uracil-DNA glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_06290
symbol: ARP88566.1
gene_biotype: protein_coding
description:
  Lysophospholipid transporter LplT; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_06295
symbol: smc
gene_biotype: protein_coding
description:
  Chromosome segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family.


ensembl_gene_id: CAL13_06300
symbol: ARP85861.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. Belongs to the ZipA family.


ensembl_gene_id: CAL13_06305
symbol: ligA
gene_biotype: protein_coding
description:
  DNA ligase (NAD(+)) LigA; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA; Belongs to the NAD-dependent DNA ligase family. LigA subfamily.


ensembl_gene_id: CAL13_06310
symbol: ARP85863.1
gene_biotype: protein_coding
description:
  Peptidylprolyl isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_06320
symbol: ARP85865.1
gene_biotype: protein_coding
description:
  Septation protein A; Involved in cell division; probably involved in intracellular septation; Belongs to the YciB family.


ensembl_gene_id: CAL13_06325
symbol: ARP85866.1
gene_biotype: protein_coding
description:
  Cobalt ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_06330
symbol: ARP85867.1
gene_biotype: protein_coding
description:
  Cobalt ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_06335
symbol: ARP85868.1
gene_biotype: protein_coding
description:
  BioY family transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_06345
symbol: ARP85870.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: CAL13_06350
symbol: ARP88568.1
gene_biotype: protein_coding
description:
  Metal-dependent hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: CAL13_06360
symbol: ARP88569.1
gene_biotype: protein_coding
description:
  Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S51 family.


ensembl_gene_id: CAL13_06365
symbol: ARP85872.1
gene_biotype: protein_coding
description:
  Class II aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_06390
symbol: ARP85876.1
gene_biotype: protein_coding
description:
  Bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aconitase/IPM isomerase family.


ensembl_gene_id: CAL13_06400
symbol: ARP85877.1
gene_biotype: protein_coding
description:
  Mechanosensitive ion channel protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_06420
symbol: ARP88573.1
gene_biotype: protein_coding
description:
  4-carboxymuconolactone decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_06475
symbol: ARP85884.1
gene_biotype: protein_coding
description:
  2-hydroxy-3-oxopropionate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_06500
symbol: CAL13_06500
gene_biotype: protein_coding
description:
  Alpha/beta hydrolase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_06550
symbol: ARP85898.1
gene_biotype: protein_coding
description:
  2-methylcitrate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the citrate synthase family.


ensembl_gene_id: CAL13_06555
symbol: ARP85899.1
gene_biotype: protein_coding
description:
  Methylisocitrate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_06560
symbol: mdh
gene_biotype: protein_coding
description:
  Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family.


ensembl_gene_id: CAL13_06570
symbol: ARP85901.1
gene_biotype: protein_coding
description:
  Succinate dehydrogenase, cytochrome b556 subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_06575
symbol: ARP85902.1
gene_biotype: protein_coding
description:
  Succinate dehydrogenase, hydrophobic membrane anchor protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_06580
symbol: ARP85903.1
gene_biotype: protein_coding
description:
  Succinate dehydrogenase flavoprotein subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.


ensembl_gene_id: CAL13_06585
symbol: sdhB
gene_biotype: protein_coding
description:
  Part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_06590
symbol: ARP85905.1
gene_biotype: protein_coding
description:
  Succinate dehydrogenase assembly factor 2; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_06595
symbol: ARP85906.1
gene_biotype: protein_coding
description:
  Citrate (Si)-synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the citrate synthase family.


ensembl_gene_id: CAL13_06605
symbol: ARP85908.1
gene_biotype: protein_coding
description:
  NADP-dependent malic enzyme; NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_06610
symbol: ARP85909.1
gene_biotype: protein_coding
description:
  2-oxoglutarate dehydrogenase E1 component; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_06615
symbol: ARP85910.1
gene_biotype: protein_coding
description:
  Dihydrolipoamide succinyltransferase; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2).


ensembl_gene_id: CAL13_06620
symbol: ARP85911.1
gene_biotype: protein_coding
description:
  Dihydrolipoyl dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_06625
symbol: ARP85912.1
gene_biotype: protein_coding
description:
  Cell division protein ZapE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_06630
symbol: trpS
gene_biotype: protein_coding
description:
  tryptophan--tRNA ligase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: CAL13_06650
symbol: ARP88576.1
gene_biotype: protein_coding
description:
  RNA-binding transcriptional accessory protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_06655
symbol: ARP88577.1
gene_biotype: protein_coding
description:
  Helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_06660
symbol: bamD
gene_biotype: protein_coding
description:
  Outer membrane protein assembly factor BamD; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.


ensembl_gene_id: CAL13_06665
symbol: ARP85918.1
gene_biotype: protein_coding
description:
  RNA pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: CAL13_06675
symbol: ARP85920.1
gene_biotype: protein_coding
description:
  Class I poly(R)-hydroxyalkanoic acid synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_06680
symbol: ARP85921.1
gene_biotype: protein_coding
description:
  beta-ketoacyl-ACP reductase; Catalyzes the formation of 3-hydroxybutyryl-CoA from acetoacetyl-CoA in polyhydroxyalkanoate synthesis; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: CAL13_06685
symbol: ARP85922.1
gene_biotype: protein_coding
description:
  Polyhydroxyalkanoate synthesis repressor PhaR; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_06695
symbol: ARP88578.1
gene_biotype: protein_coding
description:
  Periplasmic lipoprotein involved in iron transport; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_06700
symbol: ARP85924.1
gene_biotype: protein_coding
description:
  FTR1 family iron permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_06710
symbol: ARP85926.1
gene_biotype: protein_coding
description:
  Phenazine biosynthesis protein PhzC/PhzF; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_06720
symbol: ARP85928.1
gene_biotype: protein_coding
description:
  DUF1328 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_06725
symbol: ARP85929.1
gene_biotype: protein_coding
description:
  Cyanophycin synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MurCDEF family.


ensembl_gene_id: CAL13_06730
symbol: ARP85930.1
gene_biotype: protein_coding
description:
  Cyanophycin synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_06745
symbol: ARP85932.1
gene_biotype: protein_coding
description:
  Mannitol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the mannitol dehydrogenase family.


ensembl_gene_id: CAL13_06780
symbol: ARP85938.1
gene_biotype: protein_coding
description:
  Sulfolactate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LDH2/MDH2 oxidoreductase family.


ensembl_gene_id: CAL13_06795
symbol: ARP85941.1
gene_biotype: protein_coding
description:
  D-galactarate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_06805
symbol: ARP85943.1
gene_biotype: protein_coding
description:
  3-deoxy-7-phosphoheptulonate synthase; Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino- heptulosonate-7-phosphate (DAHP).


ensembl_gene_id: CAL13_06810
symbol: ARP88581.1
gene_biotype: protein_coding
description:
  Aquaporin Z; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_06830
symbol: ARP85947.1
gene_biotype: protein_coding
description:
  NADPH:quinone reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_06835
symbol: ARP85948.1
gene_biotype: protein_coding
description:
  Gluconolaconase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_06860
symbol: ubiG
gene_biotype: protein_coding
description:
  Bifunctional 3-demethylubiquinol 3-O-methyltransferase/2-polyprenyl-6-hydroxyphenol methylase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family.


ensembl_gene_id: CAL13_06875
symbol: gyrA
gene_biotype: protein_coding
description:
  DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: CAL13_06880
symbol: serC
gene_biotype: protein_coding
description:
  Phosphoserine transaminase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily.


ensembl_gene_id: CAL13_06885
symbol: ARP85957.1
gene_biotype: protein_coding
description:
  Chorismate mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_06895
symbol: ARP85959.1
gene_biotype: protein_coding
description:
  Prephenate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_06900
symbol: aroA
gene_biotype: protein_coding
description:
  3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.


ensembl_gene_id: CAL13_06905
symbol: cmk
gene_biotype: protein_coding
description:
  Cytidylate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_06910
symbol: ARP85962.1
gene_biotype: protein_coding
description:
  30S ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence.


ensembl_gene_id: CAL13_06915
symbol: ARP85963.1
gene_biotype: protein_coding
description:
  Integration host factor subunit beta; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family.


ensembl_gene_id: CAL13_06925
symbol: lapB
gene_biotype: protein_coding
description:
  Lipopolysaccharide assembly protein LapB; Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane; Belongs to the LapB family.


ensembl_gene_id: CAL13_06930
symbol: ARP85966.1
gene_biotype: protein_coding
description:
  D-glycero-beta-D-manno-heptose-7-phosphate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_06935
symbol: hldD
gene_biotype: protein_coding
description:
  ADP-glyceromanno-heptose 6-epimerase; Catalyzes the interconversion between ADP-D-glycero-beta-D- manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose; Belongs to the NAD(P)-dependent epimerase/dehydratase family. HldD subfamily.


ensembl_gene_id: CAL13_06945
symbol: ARP85969.1
gene_biotype: protein_coding
description:
  Cysteine synthase B; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cysteine synthase/cystathionine beta- synthase family.


ensembl_gene_id: CAL13_06950
symbol: ARP85970.1
gene_biotype: protein_coding
description:
  Lytic murein transglycosylase B; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_06955
symbol: ARP85971.1
gene_biotype: protein_coding
description:
  Deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_06960
symbol: ARP85972.1
gene_biotype: protein_coding
description:
  Electron transporter RnfB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_06965
symbol: ARP85973.1
gene_biotype: protein_coding
description:
  Electron transfer flavoprotein subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_06975
symbol: ARP85975.1
gene_biotype: protein_coding
description:
  Peroxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_06980
symbol: ARP85976.1
gene_biotype: protein_coding
description:
  Sulfate transporter subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_06995
symbol: cysA
gene_biotype: protein_coding
description:
  Sulfate ABC transporter ATP-binding protein; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system.


ensembl_gene_id: CAL13_07000
symbol: ARP85980.1
gene_biotype: protein_coding
description:
  Phosphoadenosine phosphosulfate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_07005
symbol: ARP85981.1
gene_biotype: protein_coding
description:
  Sulfate adenylyltransferase small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_07010
symbol: ARP85982.1
gene_biotype: protein_coding
description:
  Sulfate adenylyltransferase; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.


ensembl_gene_id: CAL13_07015
symbol: ARP85983.1
gene_biotype: protein_coding
description:
  Radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_07025
symbol: rplS
gene_biotype: protein_coding
description:
  50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.


ensembl_gene_id: CAL13_07030
symbol: ARP85986.1
gene_biotype: protein_coding
description:
  CoA pyrophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_07035
symbol: rsgA
gene_biotype: protein_coding
description:
  Ribosome small subunit-dependent GTPase A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.


ensembl_gene_id: CAL13_07040
symbol: ARP85988.1
gene_biotype: protein_coding
description:
  Peptidase M48; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_07045
symbol: orn
gene_biotype: protein_coding
description:
  Oligoribonuclease; 3'-to-5' exoribonuclease specific for small oligoribonucleotides; Belongs to the oligoribonuclease family.


ensembl_gene_id: CAL13_07050
symbol: ARP88582.1
gene_biotype: protein_coding
description:
  Phenylacetic acid degradation operon negative regulatory protein PaaX; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_07055
symbol: ARP85990.1
gene_biotype: protein_coding
description:
  1,2-phenylacetyl-CoA epoxidase subunit A; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_07060
symbol: ARP85991.1
gene_biotype: protein_coding
description:
  1,2-phenylacetyl-CoA epoxidase subunit B; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_07065
symbol: ARP85992.1
gene_biotype: protein_coding
description:
  phenylacetate-CoA oxygenase subunit PaaI; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_07070
symbol: ARP85993.1
gene_biotype: protein_coding
description:
  phenylacetate-CoA oxygenase subunit PaaJ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_07080
symbol: CAL13_07080
gene_biotype: protein_coding
description:
  Phenylacetic acid degradation protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_07085
symbol: ARP85995.1
gene_biotype: protein_coding
description:
  2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_07090
symbol: ARP85996.1
gene_biotype: protein_coding
description:
  Phenylacetic acid degradation protein PaaD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_07095
symbol: ARP85997.1
gene_biotype: protein_coding
description:
  phenylacetate--CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).


ensembl_gene_id: CAL13_07100
symbol: ARP85998.1
gene_biotype: protein_coding
description:
  MATE family efflux transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_07105
symbol: ARP85999.1
gene_biotype: protein_coding
description:
  Glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_07110
symbol: rpmE2
gene_biotype: protein_coding
description:
  50S ribosomal protein L31; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_07115
symbol: ARP86001.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0758 family.


ensembl_gene_id: CAL13_07125
symbol: ispH
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.


ensembl_gene_id: CAL13_07130
symbol: ARP86004.1
gene_biotype: protein_coding
description:
  Maleylacetoacetate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_07135
symbol: ARP88583.1
gene_biotype: protein_coding
description:
  Galactarate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_07140
symbol: ARP86005.1
gene_biotype: protein_coding
description:
  5-dehydro-4-deoxyglucarate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DapA family.


ensembl_gene_id: CAL13_07185
symbol: ARP86012.1
gene_biotype: protein_coding
description:
  GMC family oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_07190
symbol: ARP86013.1
gene_biotype: protein_coding
description:
  Gluconate 2-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_07195
symbol: ARP86014.1
gene_biotype: protein_coding
description:
  Ompetence-damaged protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CinA family.


ensembl_gene_id: CAL13_07230
symbol: ARP88587.1
gene_biotype: protein_coding
description:
  Amidase; Catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_07250
symbol: CAL13_07250
gene_biotype: protein_coding
description:
  Incomplete; partial on complete genome; missing start and stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_07275
symbol: ARP86025.1
gene_biotype: protein_coding
description:
  Hydroxypyruvate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_07280
symbol: ARP88588.1
gene_biotype: protein_coding
description:
  Enamine deaminase RidA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_07295
symbol: ARP86027.1
gene_biotype: protein_coding
description:
  SMC-Scp complex subunit ScpB; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: CAL13_07300
symbol: ARP88589.1
gene_biotype: protein_coding
description:
  23S rRNA pseudouridylate synthase B; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_07305
symbol: rimP
gene_biotype: protein_coding
description:
  Ribosome maturation factor RimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.


ensembl_gene_id: CAL13_07310
symbol: nusA
gene_biotype: protein_coding
description:
  Transcription termination/antitermination protein NusA; Participates in both transcription termination and antitermination.


ensembl_gene_id: CAL13_07315
symbol: infB
gene_biotype: protein_coding
description:
  Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.


ensembl_gene_id: CAL13_07320
symbol: rbfA
gene_biotype: protein_coding
description:
  Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.


ensembl_gene_id: CAL13_07325
symbol: truB
gene_biotype: protein_coding
description:
  tRNA pseudouridine(55) synthase TruB; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.


ensembl_gene_id: CAL13_07330
symbol: ARP86033.1
gene_biotype: protein_coding
description:
  Translational GTPase TypA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_07335
symbol: ARP86034.1
gene_biotype: protein_coding
description:
  Nitroreductase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_07340
symbol: ureG
gene_biotype: protein_coding
description:
  Urease accessory protein UreG; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG.


ensembl_gene_id: CAL13_07345
symbol: ARP88590.1
gene_biotype: protein_coding
description:
  Urease accessory protein UreF; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_07350
symbol: ureE
gene_biotype: protein_coding
description:
  Urease accessory protein UreE; Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly. Belongs to the UreE family.


ensembl_gene_id: CAL13_07355
symbol: ureC
gene_biotype: protein_coding
description:
  Urease subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_07360
symbol: ureB
gene_biotype: protein_coding
description:
  Urease subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the urease beta subunit family.


ensembl_gene_id: CAL13_07370
symbol: ureA
gene_biotype: protein_coding
description:
  Urease subunit gamma; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the urease gamma subunit family.


ensembl_gene_id: CAL13_07375
symbol: ureD
gene_biotype: protein_coding
description:
  Urease accessory protein; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.


ensembl_gene_id: CAL13_07380
symbol: ARP88591.1
gene_biotype: protein_coding
description:
  Rossman fold protein, TIGR00730 family; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LOG family.


ensembl_gene_id: CAL13_07385
symbol: polA
gene_biotype: protein_coding
description:
  DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.


ensembl_gene_id: CAL13_07395
symbol: ARP86044.1
gene_biotype: protein_coding
description:
  Carboxymethylenebutenolidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_07400
symbol: ARP86045.1
gene_biotype: protein_coding
description:
  Na/Pi cotransporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_07405
symbol: ARP88592.1
gene_biotype: protein_coding
description:
  L-serine ammonia-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the iron-sulfur dependent L-serine dehydratase family.


ensembl_gene_id: CAL13_07410
symbol: htpX
gene_biotype: protein_coding
description:
  Zinc metalloprotease HtpX; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase M48B family.


ensembl_gene_id: CAL13_07420
symbol: ARP86048.1
gene_biotype: protein_coding
description:
  Sulfurtransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_07425
symbol: ARP86049.1
gene_biotype: protein_coding
description:
  Rieske (2Fe-2S) protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_07435
symbol: xseB
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.


ensembl_gene_id: CAL13_07440
symbol: ARP86052.1
gene_biotype: protein_coding
description:
  Geranyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FPP/GGPP synthase family.


ensembl_gene_id: CAL13_07445
symbol: dxs
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.


ensembl_gene_id: CAL13_07460
symbol: priB
gene_biotype: protein_coding
description:
  Primosomal replication protein N; Binds single-stranded DNA at the primosome assembly site (PAS); Belongs to the PriB family.


ensembl_gene_id: CAL13_07465
symbol: rpsR
gene_biotype: protein_coding
description:
  30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.


ensembl_gene_id: CAL13_07480
symbol: ARP86059.1
gene_biotype: protein_coding
description:
  Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily.


ensembl_gene_id: CAL13_07485
symbol: ARP86060.1
gene_biotype: protein_coding
description:
  Bile acid:sodium symporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_07490
symbol: ARP86061.1
gene_biotype: protein_coding
description:
  4-hydroxythreonine-4-phosphate dehydrogenase PdxA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the PdxA family.


ensembl_gene_id: CAL13_07495
symbol: ARP86062.1
gene_biotype: protein_coding
description:
  Ribonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_07510
symbol: ARP86064.1
gene_biotype: protein_coding
description:
  Alanine transaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_07515
symbol: ARP86065.1
gene_biotype: protein_coding
description:
  Homoserine dehydrogenase; Catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_07520
symbol: ARP86066.1
gene_biotype: protein_coding
description:
  Threonine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_07525
symbol: ARP86067.1
gene_biotype: protein_coding
description:
  Nodulation factor ABC transporter ATP-binding protein NodI; Involved in the export of lipooligosaccharides during nodulation; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_07530
symbol: ARP88595.1
gene_biotype: protein_coding
description:
  Nodulation protein NodJ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_07535
symbol: crcB
gene_biotype: protein_coding
description:
  Fluoride ion transporter CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.


ensembl_gene_id: CAL13_07540
symbol: ARP86069.1
gene_biotype: protein_coding
description:
  Amine oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_07545
symbol: ARP86070.1
gene_biotype: protein_coding
description:
  Squalene synthase HpnD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_07550
symbol: ARP86071.1
gene_biotype: protein_coding
description:
  Squalene synthase HpnC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_07555
symbol: ARP86072.1
gene_biotype: protein_coding
description:
  Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.


ensembl_gene_id: CAL13_07565
symbol: radA
gene_biotype: protein_coding
description:
  DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.


ensembl_gene_id: CAL13_07595
symbol: ARP86080.1
gene_biotype: protein_coding
description:
  Hemoglobin-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_07600
symbol: ARP86081.1
gene_biotype: protein_coding
description:
  3-deoxy-D-manno-octulosonic acid kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_07605
symbol: ARP86082.1
gene_biotype: protein_coding
description:
  Polyamine ABC transporter substrate-binding protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.


ensembl_gene_id: CAL13_07610
symbol: potA
gene_biotype: protein_coding
description:
  Polyamine ABC transporter ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.


ensembl_gene_id: CAL13_07615
symbol: ARP86084.1
gene_biotype: protein_coding
description:
  Putrescine ABC transporter permease PotH; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_07620
symbol: ARP86085.1
gene_biotype: protein_coding
description:
  Putrescine ABC transporter permease PotI; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_07625
symbol: ARP86086.1
gene_biotype: protein_coding
description:
  Arsenate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ArsC family.


ensembl_gene_id: CAL13_07630
symbol: ARP86087.1
gene_biotype: protein_coding
description:
  3-methyladenine DNA glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DNA glycosylase MPG family.


ensembl_gene_id: CAL13_07640
symbol: ARP88596.1
gene_biotype: protein_coding
description:
  DNA recombination protein RmuC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_07645
symbol: rpiA
gene_biotype: protein_coding
description:
  Ribose 5-phosphate isomerase A; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.


ensembl_gene_id: CAL13_07650
symbol: ARP86090.1
gene_biotype: protein_coding
description:
  Phosphate transport system regulatory protein PhoU; Plays a role in the regulation of phosphate uptake.


ensembl_gene_id: CAL13_07655
symbol: ARP86091.1
gene_biotype: protein_coding
description:
  Oxidative damage protection protein; Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes.


ensembl_gene_id: CAL13_07660
symbol: argA
gene_biotype: protein_coding
description:
  Amino-acid N-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the acetyltransferase family. ArgA subfamily.


ensembl_gene_id: CAL13_07670
symbol: ARP86094.1
gene_biotype: protein_coding
description:
  ATP-dependent RNA helicase HrpA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_07675
symbol: ARP86095.1
gene_biotype: protein_coding
description:
  Aspartyl beta-hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_07680
symbol: ARP86096.1
gene_biotype: protein_coding
description:
  DNA polymerase III subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_07685
symbol: ARP86097.1
gene_biotype: protein_coding
description:
  Glycosyltransferase family 1 protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_07695
symbol: ARP86099.1
gene_biotype: protein_coding
description:
  LPS biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_07700
symbol: ARP86100.1
gene_biotype: protein_coding
description:
  Transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_07735
symbol: ARP86106.1
gene_biotype: protein_coding
description:
  4-hydroxybenzoate--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_07740
symbol: aroK
gene_biotype: protein_coding
description:
  Transcriptional regulator; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.


ensembl_gene_id: CAL13_07745
symbol: ARP86108.1
gene_biotype: protein_coding
description:
  benzoyl-CoA-dihydrodiol lyase; Cleaves the ring of 2,3-dihydro-2,3-dihydroxybenzoyl-CoA forming 6-hydroxy-3-hexenoyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_07750
symbol: ARP86109.1
gene_biotype: protein_coding
description:
  benzoyl-CoA 2,3-epoxidase subunit BoxB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_07755
symbol: ARP86110.1
gene_biotype: protein_coding
description:
  benzoyl-CoA 2,3-epoxidase subunit BoxA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_07765
symbol: ARP86112.1
gene_biotype: protein_coding
description:
  Amylo-alpha-1,6-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_07770
symbol: ARP86113.1
gene_biotype: protein_coding
description:
  Polysaccharide deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_07775
symbol: ARP86114.1
gene_biotype: protein_coding
description:
  Zinc/iron-chelating domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_07785
symbol: ARP86116.1
gene_biotype: protein_coding
description:
  Heptosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_07790
symbol: msbA
gene_biotype: protein_coding
description:
  Lipid A export permease/ATP-binding protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation.


ensembl_gene_id: CAL13_07800
symbol: ARP86119.1
gene_biotype: protein_coding
description:
  Ribonuclease E/G; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_07830
symbol: dctA
gene_biotype: protein_coding
description:
  C4-dicarboxylate transporter DctA; Responsible for the transport of dicarboxylates such as succinate, fumarate, and malate across the membrane. Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: CAL13_07880
symbol: ARP86129.1
gene_biotype: protein_coding
description:
  Aspartate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_07895
symbol: bioB
gene_biotype: protein_coding
description:
  Biotin synthase BioB; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.


ensembl_gene_id: CAL13_07900
symbol: ARP86133.1
gene_biotype: protein_coding
description:
  Adenosylmethionine--8-amino-7-oxononanoate transaminase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: CAL13_07905
symbol: bioF
gene_biotype: protein_coding
description:
  8-amino-7-oxononanoate synthase; Catalyzes the decarboxylative condensation of pimeloyl-[acyl- carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide.


ensembl_gene_id: CAL13_07910
symbol: bioD
gene_biotype: protein_coding
description:
  Dethiobiotin synthase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring.


ensembl_gene_id: CAL13_07920
symbol: ARP86137.1
gene_biotype: protein_coding
description:
  Septum formation inhibitor Maf; Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_07925
symbol: rlmH
gene_biotype: protein_coding
description:
  23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.


ensembl_gene_id: CAL13_07930
symbol: rsfS
gene_biotype: protein_coding
description:
  Ribosome silencing factor; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.


ensembl_gene_id: CAL13_07935
symbol: ARP88600.1
gene_biotype: protein_coding
description:
  Nicotinate (nicotinamide) nucleotide adenylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_07940
symbol: hemF
gene_biotype: protein_coding
description:
  Coproporphyrinogen III oxidase; Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen- IX.


ensembl_gene_id: CAL13_07945
symbol: purD
gene_biotype: protein_coding
description:
  Phosphoribosylamine--glycine ligase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GARS family.


ensembl_gene_id: CAL13_07950
symbol: ARP86141.1
gene_biotype: protein_coding
description:
  YebC/PmpR family DNA-binding transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_07960
symbol: ARP86143.1
gene_biotype: protein_coding
description:
  Aspartate aminotransferase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_07965
symbol: ARP86144.1
gene_biotype: protein_coding
description:
  Tartrate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_07975
symbol: emrB
gene_biotype: protein_coding
description:
  Multidrug MFS transporte; with EmrA is involved in resistance to hydrophobic antibiotics such as nalidixic acid; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the major facilitator superfamily.


ensembl_gene_id: CAL13_07980
symbol: ARP86146.1
gene_biotype: protein_coding
description:
  EmrA/EmrK family multidrug efflux transporter periplasmic adaptor subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_08000
symbol: ARP86150.1
gene_biotype: protein_coding
description:
  Quinone oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_08005
symbol: ARP86151.1
gene_biotype: protein_coding
description:
  YgdI/YgdR family lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_08010
symbol: fbp
gene_biotype: protein_coding
description:
  Fructose-bisphosphatase class I; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FBPase class 1 family.


ensembl_gene_id: CAL13_08035
symbol: ARP86157.1
gene_biotype: protein_coding
description:
  Metalloprotease TldD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_08045
symbol: ARP86159.1
gene_biotype: protein_coding
description:
  2-hydroxy-acid oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_08055
symbol: ARP86161.1
gene_biotype: protein_coding
description:
  Glycolate oxidase subunit GlcE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_08060
symbol: ARP86162.1
gene_biotype: protein_coding
description:
  Glycolate oxidase iron-sulfur subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_08065
symbol: ARP86163.1
gene_biotype: protein_coding
description:
  NAD synthetase; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family.


ensembl_gene_id: CAL13_08070
symbol: ARP86164.1
gene_biotype: protein_coding
description:
  NAD(P)(+) transhydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_08075
symbol: ARP86165.1
gene_biotype: protein_coding
description:
  NAD(P) transhydrogenase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_08080
symbol: mnmA
gene_biotype: protein_coding
description:
  tRNA 2-thiouridine(34) synthase MnmA; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.


ensembl_gene_id: CAL13_08095
symbol: ARP88602.1
gene_biotype: protein_coding
description:
  Adenylosuccinate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.


ensembl_gene_id: CAL13_08115
symbol: ARP86171.1
gene_biotype: protein_coding
description:
  Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_08145
symbol: ARP86176.1
gene_biotype: protein_coding
description:
  L-histidine N(alpha)-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_08165
symbol: ARP86180.1
gene_biotype: protein_coding
description:
  Cardiolipin synthase B; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_08180
symbol: ARP86183.1
gene_biotype: protein_coding
description:
  RNA polymerase factor sigma-54; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: CAL13_08190
symbol: ARP86185.1
gene_biotype: protein_coding
description:
  Sigma-54-dependent Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_08200
symbol: ARP86187.1
gene_biotype: protein_coding
description:
  Protease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_08215
symbol: ARP86189.1
gene_biotype: protein_coding
description:
  Arsenical efflux pump membrane protein ArsB; Involved in arsenical resistance. Thought to form the channel of an arsenite pump; Belongs to the ArsB family.


ensembl_gene_id: CAL13_08235
symbol: ARP86192.1
gene_biotype: protein_coding
description:
  D-serine ammonia-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_08245
symbol: rnr
gene_biotype: protein_coding
description:
  Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.


ensembl_gene_id: CAL13_08250
symbol: rlmB
gene_biotype: protein_coding
description:
  23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB; Specifically methylates the ribose of guanosine 2251 in 23S rRNA.


ensembl_gene_id: CAL13_08260
symbol: ARP86195.1
gene_biotype: protein_coding
description:
  Fe2+-dependent dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_08265
symbol: ARP86196.1
gene_biotype: protein_coding
description:
  DNA-binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.


ensembl_gene_id: CAL13_08280
symbol: ARP86197.1
gene_biotype: protein_coding
description:
  Carboxymuconolactone decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_08295
symbol: ARP86199.1
gene_biotype: protein_coding
description:
  CoA ester lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_08305
symbol: ARP88607.1
gene_biotype: protein_coding
description:
  Energy transducer TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.


ensembl_gene_id: CAL13_08310
symbol: ARP86201.1
gene_biotype: protein_coding
description:
  Flagellar motor protein MotA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_08315
symbol: ARP86202.1
gene_biotype: protein_coding
description:
  Biopolymer transporter ExbD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_08320
symbol: ARP86203.1
gene_biotype: protein_coding
description:
  DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_08330
symbol: trkD
gene_biotype: protein_coding
description:
  Potassium transporter Kup; Transport of potassium into the cell; Belongs to the HAK/KUP transporter (TC 2.A.72) family.


ensembl_gene_id: CAL13_08335
symbol: argG
gene_biotype: protein_coding
description:
  Argininosuccinate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the argininosuccinate synthase family. Type 2 subfamily.


ensembl_gene_id: CAL13_08350
symbol: ARP86208.1
gene_biotype: protein_coding
description:
  Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.


ensembl_gene_id: CAL13_08360
symbol: ARP86210.1
gene_biotype: protein_coding
description:
  Hydroxyacid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: CAL13_08385
symbol: ARP86215.1
gene_biotype: protein_coding
description:
  2-dehydro-3-deoxyglucarate aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HpcH/HpaI aldolase family.


ensembl_gene_id: CAL13_08395
symbol: ARP86217.1
gene_biotype: protein_coding
description:
  Iron dicitrate transport regulator FecR; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_08400
symbol: murJ
gene_biotype: protein_coding
description:
  Murein biosynthesis integral membrane protein MurJ; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.


ensembl_gene_id: CAL13_08405
symbol: ARP86219.1
gene_biotype: protein_coding
description:
  3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: CAL13_08410
symbol: adk
gene_biotype: protein_coding
description:
  Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.


ensembl_gene_id: CAL13_08415
symbol: kdsB
gene_biotype: protein_coding
description:
  3-deoxy-manno-octulosonate cytidylyltransferase; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria.


ensembl_gene_id: CAL13_08420
symbol: ARP88609.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0434 family.


ensembl_gene_id: CAL13_08425
symbol: lpxK
gene_biotype: protein_coding
description:
  Tetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).


ensembl_gene_id: CAL13_08440
symbol: ARP86225.1
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_08445
symbol: ARP86226.1
gene_biotype: protein_coding
description:
  Superoxide dismutase [Fe]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.


ensembl_gene_id: CAL13_08450
symbol: ARP86227.1
gene_biotype: protein_coding
description:
  Chloride channel protein EriC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_08455
symbol: ARP88610.1
gene_biotype: protein_coding
description:
  3-oxoadipyl-CoA thiolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family.


ensembl_gene_id: CAL13_08470
symbol: clpS
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease adapter ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.


ensembl_gene_id: CAL13_08475
symbol: ARP88612.1
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease ATP-binding subunit ClpA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ClpA/ClpB family.


ensembl_gene_id: CAL13_08480
symbol: ARP86230.1
gene_biotype: protein_coding
description:
  Paraquat-inducible membrane protein A; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_08485
symbol: ARP86231.1
gene_biotype: protein_coding
description:
  Paraquat-inducible protein B; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_08495
symbol: putA
gene_biotype: protein_coding
description:
  Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: CAL13_08500
symbol: ARP86234.1
gene_biotype: protein_coding
description:
  Branched chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_08510
symbol: ARP86236.1
gene_biotype: protein_coding
description:
  ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: CAL13_08525
symbol: ARP88613.1
gene_biotype: protein_coding
description:
  Manganese transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_08530
symbol: ARP86239.1
gene_biotype: protein_coding
description:
  OsmC family peroxiredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_08540
symbol: ARP86241.1
gene_biotype: protein_coding
description:
  Aldehyde oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_08550
symbol: dut
gene_biotype: protein_coding
description:
  Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family.


ensembl_gene_id: CAL13_08570
symbol: ARP86247.1
gene_biotype: protein_coding
description:
  Phosphopantothenate synthase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.


ensembl_gene_id: CAL13_08575
symbol: lspA
gene_biotype: protein_coding
description:
  Signal peptidase II; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.


ensembl_gene_id: CAL13_08580
symbol: ileS
gene_biotype: protein_coding
description:
  isoleucine--tRNA ligase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily.


ensembl_gene_id: CAL13_08585
symbol: ARP86250.1
gene_biotype: protein_coding
description:
  Riboflavin biosynthesis protein RibF; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ribF family.


ensembl_gene_id: CAL13_08590
symbol: purN
gene_biotype: protein_coding
description:
  Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.


ensembl_gene_id: CAL13_08595
symbol: ARP86251.1
gene_biotype: protein_coding
description:
  rRNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.


ensembl_gene_id: CAL13_08605
symbol: ARP88615.1
gene_biotype: protein_coding
description:
  acyl-CoA desaturase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_08610
symbol: ARP86253.1
gene_biotype: protein_coding
description:
  DNA helicase II; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_08620
symbol: prmB
gene_biotype: protein_coding
description:
  50S ribosomal protein L3 N(5)-glutamine methyltransferase; Specifically methylates the 50S ribosomal protein L3 on a specific glutamine residue; Belongs to the protein N5-glutamine methyltransferase family. PrmB subfamily.


ensembl_gene_id: CAL13_08625
symbol: dapE
gene_biotype: protein_coding
description:
  Succinyl-diaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily.


ensembl_gene_id: CAL13_08630
symbol: dapD
gene_biotype: protein_coding
description:
  2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the transferase hexapeptide repeat family.


ensembl_gene_id: CAL13_08635
symbol: ARP86257.1
gene_biotype: protein_coding
description:
  Succinyldiaminopimelate transaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_08770
symbol: ARP86282.1
gene_biotype: protein_coding
description:
  Recombinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_08780
symbol: ARP88619.1
gene_biotype: protein_coding
description:
  DNA replication protein DnaC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_08810
symbol: CAL13_08810
gene_biotype: protein_coding
description:
  HNH endonuclease; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_08820
symbol: ARP86288.1
gene_biotype: protein_coding
description:
  Phage portal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_08825
symbol: ARP86289.1
gene_biotype: protein_coding
description:
  Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_08850
symbol: ARP86294.1
gene_biotype: protein_coding
description:
  Phage head-tail adapter protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_08920
symbol: CAL13_08920
gene_biotype: protein_coding
description:
  Hypothetical protein; Incomplete; partial on complete genome; missing start and stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_08935
symbol: ARP86308.1
gene_biotype: protein_coding
description:
  Lysozyme; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_08950
symbol: ARP88623.1
gene_biotype: protein_coding
description:
  TIGR00645 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_08955
symbol: tig
gene_biotype: protein_coding
description:
  Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.


ensembl_gene_id: CAL13_08960
symbol: clpP
gene_biotype: protein_coding
description:
  ATP-dependent Clp endopeptidase, proteolytic subunit ClpP; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: CAL13_08965
symbol: clpX
gene_biotype: protein_coding
description:
  ATP-dependent protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.


ensembl_gene_id: CAL13_08970
symbol: lon
gene_biotype: protein_coding
description:
  Endopeptidase La; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.


ensembl_gene_id: CAL13_08975
symbol: lexA
gene_biotype: protein_coding
description:
  Repressor LexA; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair.


ensembl_gene_id: CAL13_08980
symbol: ARP86316.1
gene_biotype: protein_coding
description:
  Aromatic amino acid aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_08985
symbol: uvrB
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate  [...]


ensembl_gene_id: CAL13_08990
symbol: ARP86318.1
gene_biotype: protein_coding
description:
  Protein tyrosine phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.


ensembl_gene_id: CAL13_08995
symbol: ARP86319.1
gene_biotype: protein_coding
description:
  Fe-S cluster assembly transcriptional regulator IscR; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_09000
symbol: iscS
gene_biotype: protein_coding
description:
  IscS subfamily cysteine desulfurase; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins.


ensembl_gene_id: CAL13_09005
symbol: ARP86321.1
gene_biotype: protein_coding
description:
  Fe-S cluster assembly scaffold IscU; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters.


ensembl_gene_id: CAL13_09010
symbol: ARP86322.1
gene_biotype: protein_coding
description:
  Iron-sulfur cluster assembly protein IscA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HesB/IscA family.


ensembl_gene_id: CAL13_09015
symbol: hscB
gene_biotype: protein_coding
description:
  Fe-S protein assembly co-chaperone HscB; Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA; Belongs to the HscB family.


ensembl_gene_id: CAL13_09020
symbol: hscA
gene_biotype: protein_coding
description:
  Fe-S protein assembly chaperone HscA; Chaperone involved in the maturation of iron-sulfur cluster- containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB.


ensembl_gene_id: CAL13_09025
symbol: ARP86325.1
gene_biotype: protein_coding
description:
  ISC system 2Fe-2S type ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_09030
symbol: ARP86326.1
gene_biotype: protein_coding
description:
  Fe-S assembly protein IscX; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_09035
symbol: ARP86327.1
gene_biotype: protein_coding
description:
  Methylglyoxal synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_09040
symbol: lysS
gene_biotype: protein_coding
description:
  lysine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II aminoacyl-tRNA synthetase family.


ensembl_gene_id: CAL13_09055
symbol: CAL13_09055
gene_biotype: protein_coding
description:
  Peptide chain release factor 2; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_09060
symbol: ARP86331.1
gene_biotype: protein_coding
description:
  single-stranded-DNA-specific exonuclease RecJ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_09070
symbol: ARP86333.1
gene_biotype: protein_coding
description:
  Lipoprotein-releasing system transmembrane subunit LolC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_09075
symbol: lolD
gene_biotype: protein_coding
description:
  Lipoprotein-releasing system ATP-binding protein LolD; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.


ensembl_gene_id: CAL13_09090
symbol: ARP86337.1
gene_biotype: protein_coding
description:
  DNA internalization-related competence protein ComEC/Rec2; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_09100
symbol: ARP86338.1
gene_biotype: protein_coding
description:
  Phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_09105
symbol: greB
gene_biotype: protein_coding
description:
  Transcription elongation factor GreB; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length.


ensembl_gene_id: CAL13_09110
symbol: purL
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate.


ensembl_gene_id: CAL13_09130
symbol: fusA
gene_biotype: protein_coding
description:
  Elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.


ensembl_gene_id: CAL13_09135
symbol: guaB
gene_biotype: protein_coding
description:
  IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.


ensembl_gene_id: CAL13_09150
symbol: ARP86347.1
gene_biotype: protein_coding
description:
  LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_09160
symbol: ARP86349.1
gene_biotype: protein_coding
description:
  Replication protein RepA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_09180
symbol: ARP86353.1
gene_biotype: protein_coding
description:
  P-type conjugative transfer protein TrbJ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_09195
symbol: ARP86356.1
gene_biotype: protein_coding
description:
  CopG family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_09210
symbol: ARP86359.1
gene_biotype: protein_coding
description:
  Chromosome partitioning protein ParB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_09215
symbol: ARP86360.1
gene_biotype: protein_coding
description:
  Lactate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_09220
symbol: ARP86361.1
gene_biotype: protein_coding
description:
  DEAD/DEAH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_09235
symbol: CAL13_09235
gene_biotype: protein_coding
description:
  IS3 family transposase; Frameshifted; incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_09240
symbol: ARP86364.1
gene_biotype: protein_coding
description:
  DNA (cytosine-5-)-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_09245
symbol: ARP86365.1
gene_biotype: protein_coding
description:
  Restriction endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_09250
symbol: ARP88626.1
gene_biotype: protein_coding
description:
  Very short patch repair endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_09260
symbol: CAL13_09260
gene_biotype: protein_coding
description:
  Hypothetical protein; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_09280
symbol: ARP88627.1
gene_biotype: protein_coding
description:
  Aromatic alcohol reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_09310
symbol: ARP86374.1
gene_biotype: protein_coding
description:
  NmrA family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_09325
symbol: ARP86377.1
gene_biotype: protein_coding
description:
  Alkylhydroperoxidase; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.


ensembl_gene_id: CAL13_09340
symbol: ARP86379.1
gene_biotype: protein_coding
description:
  Molybdopterin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_09375
symbol: ARP86384.1
gene_biotype: protein_coding
description:
  UDP-glucose--sterol glucosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_09380
symbol: ARP86385.1
gene_biotype: protein_coding
description:
  Type 1 glutamine amidotransferase domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_09385
symbol: ARP86386.1
gene_biotype: protein_coding
description:
  Sodium-independent anion transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_09410
symbol: ARP86391.1
gene_biotype: protein_coding
description:
  Superoxide dismutase; SodA; manganese binding; only present under aerobic conditions; destroys free radicals; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_09415
symbol: msrA
gene_biotype: protein_coding
description:
  Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.


ensembl_gene_id: CAL13_09420
symbol: msrB
gene_biotype: protein_coding
description:
  Peptide-methionine (R)-S-oxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_09465
symbol: ARP86400.1
gene_biotype: protein_coding
description:
  ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.


ensembl_gene_id: CAL13_09520
symbol: ARP86410.1
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_09530
symbol: ARP86412.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_09540
symbol: ARP86414.1
gene_biotype: protein_coding
description:
  Amino acid-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_09550
symbol: ARP86416.1
gene_biotype: protein_coding
description:
  3-hydroxyacyl-CoA dehydrogenase; Converts (S)-3-hydroxyactk-CoA to 3-oxoayl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_09555
symbol: ARP86417.1
gene_biotype: protein_coding
description:
  3-keto-5-aminohexanoate cleavage protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_09570
symbol: ARP86420.1
gene_biotype: protein_coding
description:
  Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_09580
symbol: ARP86421.1
gene_biotype: protein_coding
description:
  Shikimate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_09585
symbol: ARP86422.1
gene_biotype: protein_coding
description:
  Choline dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_09605
symbol: ARP86425.1
gene_biotype: protein_coding
description:
  Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_09610
symbol: ARP86426.1
gene_biotype: protein_coding
description:
  Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_09630
symbol: ARP86430.1
gene_biotype: protein_coding
description:
  Fusaric acid resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_09640
symbol: ARP86432.1
gene_biotype: protein_coding
description:
  Malto-oligosyltrehalose synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_09645
symbol: ARP86433.1
gene_biotype: protein_coding
description:
  4-alpha-glucanotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_09650
symbol: ARP86434.1
gene_biotype: protein_coding
description:
  Malto-oligosyltrehalose trehalohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_09655
symbol: ARP86435.1
gene_biotype: protein_coding
description:
  Glycogen debranching enzyme GlgX; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 13 family.


ensembl_gene_id: CAL13_09660
symbol: glgB
gene_biotype: protein_coding
description:
  1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.


ensembl_gene_id: CAL13_09665
symbol: ARP86437.1
gene_biotype: protein_coding
description:
  Maltose alpha-D-glucosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_09670
symbol: glgE
gene_biotype: protein_coding
description:
  Hypothetical protein; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB.


ensembl_gene_id: CAL13_09680
symbol: ARP88636.1
gene_biotype: protein_coding
description:
  DNA ligase-associated DEXH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_09685
symbol: ARP86440.1
gene_biotype: protein_coding
description:
  ATP-dependent DNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_09695
symbol: ARP86442.1
gene_biotype: protein_coding
description:
  acyl-CoA--6-aminopenicillanic acid acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_09720
symbol: ARP86447.1
gene_biotype: protein_coding
description:
  Mercuric reductase; Enables the enzymatic reduction of mercuric ions to elemental mercury; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_09725
symbol: ARP88637.1
gene_biotype: protein_coding
description:
  DUF2975 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_09730
symbol: ARP86448.1
gene_biotype: protein_coding
description:
  Cro/Cl family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_09735
symbol: ARP86449.1
gene_biotype: protein_coding
description:
  6-carboxytetrahydropterin synthase QueD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_09740
symbol: queE
gene_biotype: protein_coding
description:
  7-carboxy-7-deazaguanine synthase; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds.


ensembl_gene_id: CAL13_09745
symbol: ARP88638.1
gene_biotype: protein_coding
description:
  Guanine permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_09750
symbol: tsaD
gene_biotype: protein_coding
description:
  tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.


ensembl_gene_id: CAL13_09755
symbol: plsY
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate acyltransferase; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.


ensembl_gene_id: CAL13_09760
symbol: surE
gene_biotype: protein_coding
description:
  5'/3'-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.


ensembl_gene_id: CAL13_09765
symbol: pcm
gene_biotype: protein_coding
description:
  protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins.


ensembl_gene_id: CAL13_09775
symbol: ARP86455.1
gene_biotype: protein_coding
description:
  3'-5' exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_09790
symbol: rlmD
gene_biotype: protein_coding
description:
  23S rRNA (uracil(1939)-C(5))-methyltransferase; Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. RlmD subfamily.


ensembl_gene_id: CAL13_09795
symbol: argH
gene_biotype: protein_coding
description:
  Argininosuccinate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_09800
symbol: nadE
gene_biotype: protein_coding
description:
  NAD+ synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.


ensembl_gene_id: CAL13_09805
symbol: ARP86461.1
gene_biotype: protein_coding
description:
  Transcriptional regulator; Indirectly regulates nitrogen metabolism; at high nitrogen levels P-II prevents the phosphorylation of NR-I, the transcriptional activator of the glutamine synthetase gene (glnA); at low nitrogen levels P-II is uridylylated to form PII-UMP and interacts with an adenylyltransferase (GlnE) that activates GlnA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_09810
symbol: ARP86462.1
gene_biotype: protein_coding
description:
  4a-hydroxytetrahydrobiopterin dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_09840
symbol: ARP86468.1
gene_biotype: protein_coding
description:
  With GsiBCD is involved in glutathione import; GsiA contains 2 ATP-binding domains; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.


ensembl_gene_id: CAL13_09855
symbol: ARP86471.1
gene_biotype: protein_coding
description:
  Chorismate--pyruvate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_09860
symbol: ARP86472.1
gene_biotype: protein_coding
description:
  Pseudouridylate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pseudouridine synthase RsuA family.


ensembl_gene_id: CAL13_09865
symbol: ARP88640.1
gene_biotype: protein_coding
description:
  Pyruvate dehydrogenase (acetyl-transferring), homodimeric type; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).


ensembl_gene_id: CAL13_09880
symbol: ARP86475.1
gene_biotype: protein_coding
description:
  Hydrophobe/amphiphile efflux-1 family RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_09890
symbol: rlmJ
gene_biotype: protein_coding
description:
  23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ; Specifically methylates the adenine in position 2030 of 23S rRNA.


ensembl_gene_id: CAL13_09895
symbol: ARP88641.1
gene_biotype: protein_coding
description:
  Glycerophosphodiester phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_09905
symbol: ARP86479.1
gene_biotype: protein_coding
description:
  Arylesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_09935
symbol: ARP86485.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-glutamate cyclase family.


ensembl_gene_id: CAL13_09945
symbol: ARP86487.1
gene_biotype: protein_coding
description:
  Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: CAL13_09965
symbol: ARP88642.1
gene_biotype: protein_coding
description:
  Glutamate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.


ensembl_gene_id: CAL13_09975
symbol: ARP86491.1
gene_biotype: protein_coding
description:
  Lipoate--protein ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_09980
symbol: ARP86492.1
gene_biotype: protein_coding
description:
  Biotin--protein ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_10000
symbol: ARP86496.1
gene_biotype: protein_coding
description:
  Glutathione peroxidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutathione peroxidase family.


ensembl_gene_id: CAL13_10010
symbol: ARP86498.1
gene_biotype: protein_coding
description:
  Carnitine dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CoA-transferase III family.


ensembl_gene_id: CAL13_10015
symbol: ARP86499.1
gene_biotype: protein_coding
description:
  Arsenate reductase (glutaredoxin); Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_10035
symbol: ARP86502.1
gene_biotype: protein_coding
description:
  Arginase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the arginase family.


ensembl_gene_id: CAL13_10040
symbol: ARP86503.1
gene_biotype: protein_coding
description:
  Glutathione-regulated potassium-efflux system ancillary protein KefF; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_10045
symbol: ARP86504.1
gene_biotype: protein_coding
description:
  Glutathione-regulated potassium-efflux system protein KefC; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.


ensembl_gene_id: CAL13_10050
symbol: ugpC
gene_biotype: protein_coding
description:
  Sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC; Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family.


ensembl_gene_id: CAL13_10055
symbol: ugpE
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate transporter; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.


ensembl_gene_id: CAL13_10060
symbol: ARP86507.1
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate transporter permease; With UgpEC is involved in the uptake of glycerol-3-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_10065
symbol: ARP86508.1
gene_biotype: protein_coding
description:
  Sn-glycerol-3-phosphate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_10070
symbol: proC
gene_biotype: protein_coding
description:
  Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.


ensembl_gene_id: CAL13_10075
symbol: ARP86510.1
gene_biotype: protein_coding
description:
  Folate-binding protein YgfZ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_10080
symbol: mltG
gene_biotype: protein_coding
description:
  Aminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation.


ensembl_gene_id: CAL13_10085
symbol: tmk
gene_biotype: protein_coding
description:
  dTMP kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.


ensembl_gene_id: CAL13_10090
symbol: ARP86513.1
gene_biotype: protein_coding
description:
  DNA polymerase III subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_10120
symbol: ARP86519.1
gene_biotype: protein_coding
description:
  Glutamine ABC transporter substrate-binding protein GlnH; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: CAL13_10125
symbol: ARP86520.1
gene_biotype: protein_coding
description:
  Glutamine ABC transporter permease GlnP; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_10135
symbol: ARP86522.1
gene_biotype: protein_coding
description:
  Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.


ensembl_gene_id: CAL13_10140
symbol: rpoZ
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.


ensembl_gene_id: CAL13_10150
symbol: ARP86525.1
gene_biotype: protein_coding
description:
  3-oxoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: CAL13_10155
symbol: ARP86526.1
gene_biotype: protein_coding
description:
  NlpC/P60 family protein 2; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_10160
symbol: ARP86527.1
gene_biotype: protein_coding
description:
  TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_10195
symbol: ARP86534.1
gene_biotype: protein_coding
description:
  DUF58 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_10205
symbol: ARP88645.1
gene_biotype: protein_coding
description:
  YicC family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_10210
symbol: rph
gene_biotype: protein_coding
description:
  Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation.


ensembl_gene_id: CAL13_10215
symbol: ARP86537.1
gene_biotype: protein_coding
description:
  Methyl-accepting chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_10230
symbol: ARP86540.1
gene_biotype: protein_coding
description:
  Non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.


ensembl_gene_id: CAL13_10235
symbol: ARP86541.1
gene_biotype: protein_coding
description:
  YggW family oxidoreductase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: CAL13_10240
symbol: ARP86542.1
gene_biotype: protein_coding
description:
  Type I glutamate--ammonia ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_10245
symbol: ARP86543.1
gene_biotype: protein_coding
description:
  PAS domain-containing sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_10250
symbol: ntrC
gene_biotype: protein_coding
description:
  Nitrogen regulation protein NR(I); Member of the two-component regulatory system NtrB/NtrC, which controls expression of the nitrogen-regulated (ntr) genes in response to nitrogen limitation. Phosphorylated NtrC binds directly to DNA and stimulates the formation of open promoter-sigma54-RNA polymerase complexes.


ensembl_gene_id: CAL13_10260
symbol: ARP86546.1
gene_biotype: protein_coding
description:
  Quercetin 2,3-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pirin family.


ensembl_gene_id: CAL13_10265
symbol: ARP88646.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pirin family.


ensembl_gene_id: CAL13_10285
symbol: ARP86550.1
gene_biotype: protein_coding
description:
  Carnitine dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_10330
symbol: ARP86559.1
gene_biotype: protein_coding
description:
  acyl-CoA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_10340
symbol: ARP86560.1
gene_biotype: protein_coding
description:
  LLM class flavin-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_10365
symbol: ARP86565.1
gene_biotype: protein_coding
description:
  Iron ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_10370
symbol: ARP86566.1
gene_biotype: protein_coding
description:
  ferredoxin--NADP(+) reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_10400
symbol: recG
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.


ensembl_gene_id: CAL13_10415
symbol: ARP86574.1
gene_biotype: protein_coding
description:
  DNA starvation/stationary phase protection protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_10425
symbol: ARP86575.1
gene_biotype: protein_coding
description:
  Leucine ABC transporter subunit substrate-binding protein LivK; With LivFGHM is involved in the high affinity leucine transport; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_10430
symbol: amn
gene_biotype: protein_coding
description:
  AMP nucleosidase; Catalyzes the hydrolysis of the N-glycosidic bond of AMP to form adenine and ribose 5-phosphate. Involved in regulation of AMP concentrations.


ensembl_gene_id: CAL13_10435
symbol: ARP86577.1
gene_biotype: protein_coding
description:
  Aconitase subunit 2; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_10440
symbol: ARP86578.1
gene_biotype: protein_coding
description:
  Aconitase subunit 1; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_10460
symbol: ARP86582.1
gene_biotype: protein_coding
description:
  Chloride channel protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_10485
symbol: ARP86587.1
gene_biotype: protein_coding
description:
  Rhamnonate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the mandelate racemase/muconate lactonizing enzyme family.


ensembl_gene_id: CAL13_10500
symbol: ARP86589.1
gene_biotype: protein_coding
description:
  Mandelate racemase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_10545
symbol: ARP86597.1
gene_biotype: protein_coding
description:
  beta-ketoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_10550
symbol: ARP86598.1
gene_biotype: protein_coding
description:
  PAS domain S-box protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_10570
symbol: ARP86602.1
gene_biotype: protein_coding
description:
  Phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_10605
symbol: ARP86609.1
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_10625
symbol: ARP86611.1
gene_biotype: protein_coding
description:
  CMD domain protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_10630
symbol: ARP88653.1
gene_biotype: protein_coding
description:
  palmitoyl-CoA hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_10640
symbol: ARP86613.1
gene_biotype: protein_coding
description:
  Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_10645
symbol: ARP86614.1
gene_biotype: protein_coding
description:
  Methionine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_10690
symbol: ARP86621.1
gene_biotype: protein_coding
description:
  2,5-didehydrogluconate reductase B; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_10705
symbol: ARP86624.1
gene_biotype: protein_coding
description:
  Thiamine biosynthesis protein ApbE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_10795
symbol: ARP86641.1
gene_biotype: protein_coding
description:
  glcG protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_10830
symbol: ARP86647.1
gene_biotype: protein_coding
description:
  Nucleotidyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_10885
symbol: ARP86656.1
gene_biotype: protein_coding
description:
  Protein-tyrosine-phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_10890
symbol: ARP86657.1
gene_biotype: protein_coding
description:
  Arsenical resistance protein ArsH; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_10905
symbol: ARP88658.1
gene_biotype: protein_coding
description:
  Autotransporter outer membrane beta-barrel domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_10920
symbol: ARP86662.1
gene_biotype: protein_coding
description:
  itaconyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_10935
symbol: ARP86665.1
gene_biotype: protein_coding
description:
  pimeloyl-CoA dehydrogenase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_10975
symbol: ARP86673.1
gene_biotype: protein_coding
description:
  3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_10980
symbol: ARP86674.1
gene_biotype: protein_coding
description:
  3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_11030
symbol: ARP88659.1
gene_biotype: protein_coding
description:
  DUF188 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0178 family.


ensembl_gene_id: CAL13_11040
symbol: ARP86685.1
gene_biotype: protein_coding
description:
  alpha-L-glutamate ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_11085
symbol: ARP86693.1
gene_biotype: protein_coding
description:
  Cell envelope protein SmpA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_11120
symbol: ARP86700.1
gene_biotype: protein_coding
description:
  6-phosphogluconate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_11125
symbol: ARP86701.1
gene_biotype: protein_coding
description:
  3-phosphoglycerate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_11140
symbol: ARP86704.1
gene_biotype: protein_coding
description:
  Chemotaxis protein MotA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_11150
symbol: ARP86706.1
gene_biotype: protein_coding
description:
  Dihydrodipicolinate synthase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_11160
symbol: ARP86708.1
gene_biotype: protein_coding
description:
  With DhaL and DhaM forms dihydroxyacetone kinase, which is responsible for phosphorylating dihydroxyacetone; DhaK is the dihydroxyacetone binding subunit of the dihydroxyacetone kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_11230
symbol: ARP86719.1
gene_biotype: protein_coding
description:
  DNA ligase D; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_11235
symbol: ku
gene_biotype: protein_coding
description:
  Ku protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.


ensembl_gene_id: CAL13_11240
symbol: ARP88665.1
gene_biotype: protein_coding
description:
  2OG-Fe(II) oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_11245
symbol: ARP86720.1
gene_biotype: protein_coding
description:
  VOC family virulence protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_11250
symbol: ARP86721.1
gene_biotype: protein_coding
description:
  Two-component system sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_11255
symbol: ARP86722.1
gene_biotype: protein_coding
description:
  Peptidase S9 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_11330
symbol: ARP88669.1
gene_biotype: protein_coding
description:
  Sir2 family NAD-dependent protein deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_11350
symbol: ARP86735.1
gene_biotype: protein_coding
description:
  UDP-galactopyranose mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_11355
symbol: ARP86736.1
gene_biotype: protein_coding
description:
  Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_11385
symbol: ARP86741.1
gene_biotype: protein_coding
description:
  bugT protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_11395
symbol: ARP86743.1
gene_biotype: protein_coding
description:
  4-oxalomesaconate hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_11400
symbol: ARP86744.1
gene_biotype: protein_coding
description:
  Peptidylprolyl isomerase; Rotamase C; accelerates isomerization of the peptidyl prolyl bond; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_11425
symbol: ARP86748.1
gene_biotype: protein_coding
description:
  Metallophosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_11455
symbol: ARP86754.1
gene_biotype: protein_coding
description:
  4-oxalocrotonate tautomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_11465
symbol: ARP86756.1
gene_biotype: protein_coding
description:
  3-deoxy-D-arabino-heptulosonate 7-phosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_11480
symbol: CAL13_11480
gene_biotype: protein_coding
description:
  Deoxyribodipyrimidine photolyase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_11485
symbol: ARP86759.1
gene_biotype: protein_coding
description:
  Multidrug ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_11490
symbol: ARP86760.1
gene_biotype: protein_coding
description:
  EmrB/QacA family drug resistance transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the major facilitator superfamily.


ensembl_gene_id: CAL13_11525
symbol: ARP86767.1
gene_biotype: protein_coding
description:
  SDR family oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_11555
symbol: ARP86770.1
gene_biotype: protein_coding
description:
  Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_11570
symbol: ARP86773.1
gene_biotype: protein_coding
description:
  ABC transporter substrate-binding protein; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.


ensembl_gene_id: CAL13_11580
symbol: ARP86775.1
gene_biotype: protein_coding
description:
  Ferredoxin reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_11585
symbol: ARP86776.1
gene_biotype: protein_coding
description:
  Biphenyl 2,3-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_11590
symbol: ARP86777.1
gene_biotype: protein_coding
description:
  Ring-hydroxylating dioxygenase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_11595
symbol: ARP86778.1
gene_biotype: protein_coding
description:
  N-carbamoylsarcosine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_11600
symbol: ARP86779.1
gene_biotype: protein_coding
description:
  2,5-dihydroxypyridine 5,6-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_11610
symbol: maiA
gene_biotype: protein_coding
description:
  Asp/Glu racemase; Catalyzes cis-trans isomerization of the C2-C3 double bond in maleate to yield fumarate.


ensembl_gene_id: CAL13_11625
symbol: ARP86784.1
gene_biotype: protein_coding
description:
  Catalyzes the release of C-terminal glutamate residues from N-acylating moieties; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_11635
symbol: ARP86786.1
gene_biotype: protein_coding
description:
  Ornithine cyclodeaminase; Catalyzes the formation of L-proline from L-ornithine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_11645
symbol: ARP86788.1
gene_biotype: protein_coding
description:
  Translation initiation inhibitor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_11660
symbol: ARP86791.1
gene_biotype: protein_coding
description:
  Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_11675
symbol: ARP86794.1
gene_biotype: protein_coding
description:
  Formate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: CAL13_11680
symbol: ARP88675.1
gene_biotype: protein_coding
description:
  Cytochrome c oxidase subunit II; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_11690
symbol: ARP86796.1
gene_biotype: protein_coding
description:
  Cytochrome C oxidase subunit III; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_11700
symbol: ARP86798.1
gene_biotype: protein_coding
description:
  Sodium:proton antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_11705
symbol: tcuB
gene_biotype: protein_coding
description:
  Tricarballylate utilization protein TcuB; With CitA (TcuA) catalyzes the oxidation of tricarballylate to cis-aconitate; originally thought to be involved in citrate utilization; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_11710
symbol: ARP86799.1
gene_biotype: protein_coding
description:
  FAD-binding dehydrogenase; Catalyzes the oxidation of tricarballylate to cis-aconitate; FAD-dependent; required for the utilization of tricarballylate as a carbon and energy source by S. enterica; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_11760
symbol: ARP86806.1
gene_biotype: protein_coding
description:
  Secondary thiamine-phosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_11770
symbol: ARP86808.1
gene_biotype: protein_coding
description:
  GAF domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_11800
symbol: ARP86813.1
gene_biotype: protein_coding
description:
  ModE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_11810
symbol: modC
gene_biotype: protein_coding
description:
  Molybdenum ABC transporter ATP-binding protein; Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Molybdate importer (TC 3.A.1.8) family.


ensembl_gene_id: CAL13_11815
symbol: ARP86816.1
gene_biotype: protein_coding
description:
  Molybdenum ABC transporter permease subunit; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: CAL13_11820
symbol: ARP86817.1
gene_biotype: protein_coding
description:
  Molybdate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_11830
symbol: nnrE
gene_biotype: protein_coding
description:
  Bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration.  Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific [...]


ensembl_gene_id: CAL13_11840
symbol: ARP86820.1
gene_biotype: protein_coding
description:
  Phosphatidylinositol kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_11855
symbol: ARP86823.1
gene_biotype: protein_coding
description:
  Selenoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_11875
symbol: lldD
gene_biotype: protein_coding
description:
  Alpha-hydroxy-acid oxidizing enzyme; Flavin mononucleotide-dependent dehydrogenase; functions in aerobic respiration and also has a role in anaerobic nitrate respiration; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_11880
symbol: ARP86828.1
gene_biotype: protein_coding
description:
  RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: CAL13_11895
symbol: ARP86831.1
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_11900
symbol: ARP88682.1
gene_biotype: protein_coding
description:
  Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_11905
symbol: gabD
gene_biotype: protein_coding
description:
  Succinate-semialdehyde dehydrogenase (NADP(+)); Catalyzes the formation of succinate from succinate semialdehyde; NADP dependent; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_11925
symbol: ARP86836.1
gene_biotype: protein_coding
description:
  Cytosine deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_11950
symbol: ARP86840.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0261 family.


ensembl_gene_id: CAL13_11960
symbol: ARP88684.1
gene_biotype: protein_coding
description:
  Flotillin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_11965
symbol: ARP86842.1
gene_biotype: protein_coding
description:
  MxaD family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_11975
symbol: ARP86844.1
gene_biotype: protein_coding
description:
  NAD(P)H dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_12020
symbol: ARP86853.1
gene_biotype: protein_coding
description:
  4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_12035
symbol: fur
gene_biotype: protein_coding
description:
  Transcriptional repressor; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Fur family.


ensembl_gene_id: CAL13_12040
symbol: ARP86857.1
gene_biotype: protein_coding
description:
  AI-2E family transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_12050
symbol: ARP86859.1
gene_biotype: protein_coding
description:
  Carbonate dehydratase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.


ensembl_gene_id: CAL13_12055
symbol: ARP86860.1
gene_biotype: protein_coding
description:
  Alpha-ketoglutarate-dependent dioxygenase AlkB; Oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA lesions; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_12060
symbol: xerD
gene_biotype: protein_coding
description:
  Site-specific tyrosine recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.


ensembl_gene_id: CAL13_12070
symbol: ARP86862.1
gene_biotype: protein_coding
description:
  Serine/threonine protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_12075
symbol: ARP86863.1
gene_biotype: protein_coding
description:
  Nitrate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_12080
symbol: ARP88686.1
gene_biotype: protein_coding
description:
  Sulfonate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_12115
symbol: ARP86869.1
gene_biotype: protein_coding
description:
  Iron export ABC transporter permease subunit FetB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_12130
symbol: CAL13_12130
gene_biotype: protein_coding
description:
  LysR family transcriptional regulator; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_12140
symbol: ARP86872.1
gene_biotype: protein_coding
description:
  Glutamate racemase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_12155
symbol: livG
gene_biotype: protein_coding
description:
  Part of the ABC transporter complexes LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_12160
symbol: livM
gene_biotype: protein_coding
description:
  Part of the ABC transporter complex LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: CAL13_12165
symbol: ARP86877.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid ABC transporter permease LivH; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: CAL13_12180
symbol: ARP86880.1
gene_biotype: protein_coding
description:
  3-hydroxyisobutyrate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HIBADH-related family.


ensembl_gene_id: CAL13_12195
symbol: ARP86883.1
gene_biotype: protein_coding
description:
  RnfH family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_12200
symbol: ARP86884.1
gene_biotype: protein_coding
description:
  Ubiquinone-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_12205
symbol: smpB
gene_biotype: protein_coding
description:
  SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...]


ensembl_gene_id: CAL13_12215
symbol: ARP86887.1
gene_biotype: protein_coding
description:
  Paraslipin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_12220
symbol: ARP86888.1
gene_biotype: protein_coding
description:
  NfeD-like family protein 1; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_12225
symbol: ARP88689.1
gene_biotype: protein_coding
description:
  GMP synthase; Catalyzes the transfer of the ammonia group from glutamine to a new carbon-nitrogen group; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_12235
symbol: ARP86889.1
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family.


ensembl_gene_id: CAL13_12240
symbol: ARP86890.1
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate synthase regulatory protein; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the phosphoenolpyruvate synthase (PEPS) by catalyzing its phosphorylation/dephosphorylation.


ensembl_gene_id: CAL13_12245
symbol: ARP86891.1
gene_biotype: protein_coding
description:
  ArsR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_12260
symbol: ARP86894.1
gene_biotype: protein_coding
description:
  RNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: CAL13_12270
symbol: lpxB
gene_biotype: protein_coding
description:
  lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: CAL13_12275
symbol: lpxA
gene_biotype: protein_coding
description:
  acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: CAL13_12280
symbol: fabZ
gene_biotype: protein_coding
description:
  3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.


ensembl_gene_id: CAL13_12285
symbol: lpxD
gene_biotype: protein_coding
description:
  UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily.


ensembl_gene_id: CAL13_12290
symbol: ARP86900.1
gene_biotype: protein_coding
description:
  Outer membrane protein chaperone; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the skp family.


ensembl_gene_id: CAL13_12295
symbol: bamA
gene_biotype: protein_coding
description:
  Outer membrane protein assembly factor BamA; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.


ensembl_gene_id: CAL13_12300
symbol: ARP86902.1
gene_biotype: protein_coding
description:
  RIP metalloprotease RseP; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_12305
symbol: dxr
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose-5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family.


ensembl_gene_id: CAL13_12310
symbol: ARP86904.1
gene_biotype: protein_coding
description:
  Phosphatidate cytidylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_12315
symbol: ARP86905.1
gene_biotype: protein_coding
description:
  Di-trans,poly-cis-decaprenylcistransferase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.


ensembl_gene_id: CAL13_12320
symbol: frr
gene_biotype: protein_coding
description:
  Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.


ensembl_gene_id: CAL13_12330
symbol: tsf
gene_biotype: protein_coding
description:
  Translation elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.


ensembl_gene_id: CAL13_12335
symbol: rpsB
gene_biotype: protein_coding
description:
  30S ribosomal protein S2; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS2 family.


ensembl_gene_id: CAL13_12340
symbol: map
gene_biotype: protein_coding
description:
  Type I methionyl aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.


ensembl_gene_id: CAL13_12345
symbol: glnD
gene_biotype: protein_coding
description:
  [protein-PII] uridylyltransferase; Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen metabolism.


ensembl_gene_id: CAL13_12350
symbol: ARP88691.1
gene_biotype: protein_coding
description:
  Antibiotic resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_12355
symbol: ARP86912.1
gene_biotype: protein_coding
description:
  Disulfide bond formation protein B; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_12360
symbol: purF
gene_biotype: protein_coding
description:
  Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.


ensembl_gene_id: CAL13_12365
symbol: ARP86914.1
gene_biotype: protein_coding
description:
  Colicin V synthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_12370
symbol: ARP86915.1
gene_biotype: protein_coding
description:
  Sporulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_12375
symbol: ARP86916.1
gene_biotype: protein_coding
description:
  Bifunctional tetrahydrofolate synthase/dihydrofolate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the folylpolyglutamate synthase family.


ensembl_gene_id: CAL13_12380
symbol: ARP86917.1
gene_biotype: protein_coding
description:
  Flagellar protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_12390
symbol: ARP86919.1
gene_biotype: protein_coding
description:
  Flagellar export chaperone FliS; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_12395
symbol: ARP86920.1
gene_biotype: protein_coding
description:
  Flagellar protein FliT; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_12405
symbol: ARP86922.1
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlhB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_12410
symbol: ARP86923.1
gene_biotype: protein_coding
description:
  Flagellar brake protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_12420
symbol: ARP86925.1
gene_biotype: protein_coding
description:
  Flagellar hook-basal body complex protein FliE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_12425
symbol: ARP86926.1
gene_biotype: protein_coding
description:
  Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.


ensembl_gene_id: CAL13_12430
symbol: ARP86927.1
gene_biotype: protein_coding
description:
  Flagellar motor switch protein FliG; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_12435
symbol: ARP86928.1
gene_biotype: protein_coding
description:
  Flagellar assembly protein FliH; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_12440
symbol: ARP86929.1
gene_biotype: protein_coding
description:
  Flagellar protein export ATPase FliI; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_12445
symbol: ARP86930.1
gene_biotype: protein_coding
description:
  Flagellar export protein FliJ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_12455
symbol: ARP86932.1
gene_biotype: protein_coding
description:
  Flagellar basal body protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.


ensembl_gene_id: CAL13_12460
symbol: ARP86933.1
gene_biotype: protein_coding
description:
  Flagellar motor switch protein FliM; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_12465
symbol: ARP86934.1
gene_biotype: protein_coding
description:
  Flagellar motor switch protein FliN; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_12470
symbol: ARP86935.1
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliO; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_12475
symbol: fliP
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.


ensembl_gene_id: CAL13_12480
symbol: fliQ
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.


ensembl_gene_id: CAL13_12485
symbol: ARP86938.1
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family.


ensembl_gene_id: CAL13_12510
symbol: CAL13_12510
gene_biotype: protein_coding
description:
  Methyl-accepting chemotaxis protein; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_12520
symbol: ARP88693.1
gene_biotype: protein_coding
description:
  Flagellar hook-associated protein 3; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_12525
symbol: flgK
gene_biotype: protein_coding
description:
  Flagellar hook-associated protein FlgK; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_12530
symbol: ARP86944.1
gene_biotype: protein_coding
description:
  Flagellar assembly peptidoglycan hydrolase FlgJ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_12535
symbol: flgI
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlgI; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.


ensembl_gene_id: CAL13_12540
symbol: flgH
gene_biotype: protein_coding
description:
  Flagellar basal body L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.


ensembl_gene_id: CAL13_12545
symbol: ARP86946.1
gene_biotype: protein_coding
description:
  Flagellar basal-body rod protein FlgG; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the flagella basal body rod proteins family.


ensembl_gene_id: CAL13_12550
symbol: flgF
gene_biotype: protein_coding
description:
  FlgF, with FlgB and C, makes up the proximal portion of the flagellar basal body rod; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_12555
symbol: ARP86948.1
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlgE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_12560
symbol: flgD
gene_biotype: protein_coding
description:
  Flagellar basal body rod modification protein; Required for flagellar hook formation. May act as a scaffolding protein.


ensembl_gene_id: CAL13_12565
symbol: ARP86950.1
gene_biotype: protein_coding
description:
  Flagellar basal body rod protein FlgC; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the flagella basal body rod proteins family.


ensembl_gene_id: CAL13_12570
symbol: ARP86951.1
gene_biotype: protein_coding
description:
  Flagellar basal body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.


ensembl_gene_id: CAL13_12575
symbol: ARP88695.1
gene_biotype: protein_coding
description:
  Flagella basal body P-ring formation protein FlgA; Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P- ring assembly; Belongs to the FlgA family.


ensembl_gene_id: CAL13_12580
symbol: ARP86952.1
gene_biotype: protein_coding
description:
  Flagellar biosynthesis anti-sigma factor FlgM; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_12590
symbol: ARP86954.1
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlhF; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_12595
symbol: flhA
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.


ensembl_gene_id: CAL13_12600
symbol: flhB
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family.


ensembl_gene_id: CAL13_12605
symbol: ARP86957.1
gene_biotype: protein_coding
description:
  Protein phosphatase CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P).


ensembl_gene_id: CAL13_12610
symbol: ARP86958.1
gene_biotype: protein_coding
description:
  Two-component system response regulator; Chemotaxis regulator that, when phosphorylated, interacts with the flagellar motor causing the flagella to spin clockwise which causes the cell to tumble; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_12615
symbol: cheB
gene_biotype: protein_coding
description:
  Chemotaxis response regulator protein-glutamate methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.


ensembl_gene_id: CAL13_12620
symbol: ARP86960.1
gene_biotype: protein_coding
description:
  Chemotaxis protein CheR; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP.


ensembl_gene_id: CAL13_12630
symbol: ARP86961.1
gene_biotype: protein_coding
description:
  Chemotaxis protein CheW; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_12635
symbol: ARP86962.1
gene_biotype: protein_coding
description:
  Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_12645
symbol: motB
gene_biotype: protein_coding
description:
  Flagellar motor protein MotB; With MotA forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_12650
symbol: ARP86965.1
gene_biotype: protein_coding
description:
  Flagellar motor stator protein MotA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_12655
symbol: flhC
gene_biotype: protein_coding
description:
  Transcriptional regulator FlhC; Functions in complex with FlhD as a master transcriptional regulator that regulates transcription of several flagellar and non- flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways; Belongs to the FlhC family.


ensembl_gene_id: CAL13_12660
symbol: flhD
gene_biotype: protein_coding
description:
  Flagellar transcriptional activator FlhD; Functions in complex with FlhC as a master transcriptional regulator that regulates transcription of several flagellar and non- flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways; Belongs to the FlhD family.


ensembl_gene_id: CAL13_12665
symbol: fliA
gene_biotype: protein_coding
description:
  RNA polymerase sigma factor FliA; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes; Belongs to the sigma-70 factor family. FliA subfamily.


ensembl_gene_id: CAL13_12670
symbol: ARP86969.1
gene_biotype: protein_coding
description:
  Flagellin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_12700
symbol: ARP86975.1
gene_biotype: protein_coding
description:
  Dihydrolipoyllysine-residue acetyltransferase; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).


ensembl_gene_id: CAL13_12720
symbol: folD
gene_biotype: protein_coding
description:
  Bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.


ensembl_gene_id: CAL13_12735
symbol: ARP86982.1
gene_biotype: protein_coding
description:
  GlsB/YeaQ/YmgE family stress response membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_12745
symbol: ARP86984.1
gene_biotype: protein_coding
description:
  Glutathione peroxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_12750
symbol: ARP86985.1
gene_biotype: protein_coding
description:
  Heavy metal transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_12755
symbol: ARP88697.1
gene_biotype: protein_coding
description:
  Copper-translocating P-type ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_12760
symbol: ARP86986.1
gene_biotype: protein_coding
description:
  Cu(I)-responsive transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_12765
symbol: ARP86987.1
gene_biotype: protein_coding
description:
  Nitroreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_12770
symbol: ARP86988.1
gene_biotype: protein_coding
description:
  Cd(II)/Pb(II)-responsive transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_12800
symbol: ARP86993.1
gene_biotype: protein_coding
description:
  Transglutaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_12810
symbol: ARP86995.1
gene_biotype: protein_coding
description:
  Helix-turn-helix transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_12815
symbol: ARP86996.1
gene_biotype: protein_coding
description:
  Secretion protein HylD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_12820
symbol: ARP86997.1
gene_biotype: protein_coding
description:
  Type I secretion system permease/ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_12840
symbol: ppc
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle; Belongs to the PEPCase type 1 family.


ensembl_gene_id: CAL13_12855
symbol: ARP88699.1
gene_biotype: protein_coding
description:
  Oxalate/formate MFS antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_12860
symbol: ARP87003.1
gene_biotype: protein_coding
description:
  DUF2513 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_12865
symbol: pckG
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate carboxykinase (GTP); Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle; Belongs to the phosphoenolpyruvate carboxykinase [GTP] family.


ensembl_gene_id: CAL13_12870
symbol: ARP87005.1
gene_biotype: protein_coding
description:
  DeoR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_12900
symbol: ARP87010.1
gene_biotype: protein_coding
description:
  aminoacyl-tRNA hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_12915
symbol: ARP87013.1
gene_biotype: protein_coding
description:
  Thymidylate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_12920
symbol: ARP87014.1
gene_biotype: protein_coding
description:
  ABC-F family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_12940
symbol: tadA
gene_biotype: protein_coding
description:
  tRNA adenosine(34) deaminase TadA; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: CAL13_12960
symbol: CAL13_12960
gene_biotype: protein_coding
description:
  Cell filamentation protein Fic; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_12980
symbol: ARP87020.1
gene_biotype: protein_coding
description:
  Type III effector; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_12990
symbol: CAL13_12990
gene_biotype: protein_coding
description:
  Hypothetical protein; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_13050
symbol: ARP87031.1
gene_biotype: protein_coding
description:
  Amino acid ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_13055
symbol: ARP87032.1
gene_biotype: protein_coding
description:
  Phosphate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_13075
symbol: ARP87036.1
gene_biotype: protein_coding
description:
  Proline hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_13105
symbol: ARP87042.1
gene_biotype: protein_coding
description:
  ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: CAL13_13120
symbol: ARP87045.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0337 (CsbD) family.


ensembl_gene_id: CAL13_13130
symbol: ARP87047.1
gene_biotype: protein_coding
description:
  NADPH-dependent ferric siderophore reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_13135
symbol: ARP87048.1
gene_biotype: protein_coding
description:
  PadR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_13145
symbol: ARP87050.1
gene_biotype: protein_coding
description:
  DNA polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_13150
symbol: dnaE2
gene_biotype: protein_coding
description:
  Error-prone DNA polymerase; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase.


ensembl_gene_id: CAL13_13165
symbol: ARP87053.1
gene_biotype: protein_coding
description:
  D-amino acid dehydrogenase small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_13185
symbol: ARP87056.1
gene_biotype: protein_coding
description:
  1-acyl-sn-glycerol-3-phosphate acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_13190
symbol: ARP87057.1
gene_biotype: protein_coding
description:
  Acyl carrier protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_13225
symbol: ARP88707.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).


ensembl_gene_id: CAL13_13245
symbol: ARP87066.1
gene_biotype: protein_coding
description:
  Beta-ketoacyl-[acyl-carrier-protein] synthase II; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.


ensembl_gene_id: CAL13_13250
symbol: ARP87067.1
gene_biotype: protein_coding
description:
  3-hydroxylacyl-ACP dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_13260
symbol: ARP87069.1
gene_biotype: protein_coding
description:
  beta-ketoacyl-ACP synthase II; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.


ensembl_gene_id: CAL13_13265
symbol: ARP87070.1
gene_biotype: protein_coding
description:
  Excinuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_13270
symbol: ARP87071.1
gene_biotype: protein_coding
description:
  glutamyl-tRNA amidotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_13275
symbol: dinB
gene_biotype: protein_coding
description:
  DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.


ensembl_gene_id: CAL13_13280
symbol: ARP87073.1
gene_biotype: protein_coding
description:
  Phenylacetic acid degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_13290
symbol: ARP88709.1
gene_biotype: protein_coding
description:
  S9 family peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_13305
symbol: ARP87077.1
gene_biotype: protein_coding
description:
  Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_13320
symbol: ARP87080.1
gene_biotype: protein_coding
description:
  Metal ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_13345
symbol: ARP87084.1
gene_biotype: protein_coding
description:
  2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HpcH/HpaI aldolase family.


ensembl_gene_id: CAL13_13365
symbol: ARP88711.1
gene_biotype: protein_coding
description:
  Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_13370
symbol: ARP87088.1
gene_biotype: protein_coding
description:
  Response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_13390
symbol: ihfA
gene_biotype: protein_coding
description:
  Integration host factor subunit alpha; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family.


ensembl_gene_id: CAL13_13395
symbol: pheT
gene_biotype: protein_coding
description:
  phenylalanine--tRNA ligase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.


ensembl_gene_id: CAL13_13400
symbol: pheS
gene_biotype: protein_coding
description:
  phenylalanine--tRNA ligase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.


ensembl_gene_id: CAL13_13405
symbol: rplT
gene_biotype: protein_coding
description:
  50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.


ensembl_gene_id: CAL13_13410
symbol: rpmI
gene_biotype: protein_coding
description:
  50S ribosomal protein L35; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL35 family.


ensembl_gene_id: CAL13_13415
symbol: ARP87095.1
gene_biotype: protein_coding
description:
  Among the AAA+ ATPases, the YifB protease family belongs to the Helix 2 insert clade; unknown function; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_13430
symbol: ARP87098.1
gene_biotype: protein_coding
description:
  Ammonia channel protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_13435
symbol: ARP88713.1
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate--protein phosphotransferase; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr).


ensembl_gene_id: CAL13_13440
symbol: ARP87099.1
gene_biotype: protein_coding
description:
  Phosphocarrier protein HPr; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_13445
symbol: ARP87100.1
gene_biotype: protein_coding
description:
  PTS mannose transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_13450
symbol: gshB
gene_biotype: protein_coding
description:
  Glutathione synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic GSH synthase family.


ensembl_gene_id: CAL13_13455
symbol: infC
gene_biotype: protein_coding
description:
  Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.


ensembl_gene_id: CAL13_13460
symbol: thrS
gene_biotype: protein_coding
description:
  threonine--tRNA ligase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr).


ensembl_gene_id: CAL13_13490
symbol: trpF
gene_biotype: protein_coding
description:
  N-(5'-phosphoribosyl)anthranilate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TrpF family.


ensembl_gene_id: CAL13_13495
symbol: truA
gene_biotype: protein_coding
description:
  tRNA pseudouridine(38-40) synthase TruA; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.


ensembl_gene_id: CAL13_13505
symbol: asd
gene_biotype: protein_coding
description:
  Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.


ensembl_gene_id: CAL13_13510
symbol: leuB
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.


ensembl_gene_id: CAL13_13515
symbol: leuD
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydratase small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily.


ensembl_gene_id: CAL13_13520
symbol: leuC
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydratase large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.


ensembl_gene_id: CAL13_13530
symbol: aroC
gene_biotype: protein_coding
description:
  Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.


ensembl_gene_id: CAL13_13555
symbol: selO
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the transfer of adenosine 5'-monophosphate (AMP) to Ser, Thr or Tyr residues of target proteins (AMPylation). Belongs to the SELO family.


ensembl_gene_id: CAL13_13575
symbol: dusA
gene_biotype: protein_coding
description:
  tRNA dihydrouridine(20/20a) synthase DusA; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs; Belongs to the Dus family. DusA subfamily.


ensembl_gene_id: CAL13_13580
symbol: thrB
gene_biotype: protein_coding
description:
  Homoserine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pseudomonas-type ThrB family.


ensembl_gene_id: CAL13_13600
symbol: ARP88718.1
gene_biotype: protein_coding
description:
  Secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_13605
symbol: ARP87126.1
gene_biotype: protein_coding
description:
  Secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial secretin family.


ensembl_gene_id: CAL13_13610
symbol: ARP87127.1
gene_biotype: protein_coding
description:
  Flp pilus assembly protein CpaB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_13635
symbol: ARP87132.1
gene_biotype: protein_coding
description:
  Entericidin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_13640
symbol: ARP87133.1
gene_biotype: protein_coding
description:
  5-carboxymethyl-2-hydroxymuconate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_13645
symbol: ppa
gene_biotype: protein_coding
description:
  Inorganic pyrophosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.


ensembl_gene_id: CAL13_13650
symbol: ARP87135.1
gene_biotype: protein_coding
description:
  Protoheme IX synthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_13655
symbol: ARP87136.1
gene_biotype: protein_coding
description:
  Heme biosynthesis operon protein HemX; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_13665
symbol: hemC
gene_biotype: protein_coding
description:
  Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.


ensembl_gene_id: CAL13_13690
symbol: sucD
gene_biotype: protein_coding
description:
  succinate--CoA ligase subunit alpha; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.


ensembl_gene_id: CAL13_13695
symbol: sucC
gene_biotype: protein_coding
description:
  succinate--CoA ligase subunit beta; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.


ensembl_gene_id: CAL13_13705
symbol: metE
gene_biotype: protein_coding
description:
  5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family.


ensembl_gene_id: CAL13_13720
symbol: recA
gene_biotype: protein_coding
description:
  Recombinase RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.


ensembl_gene_id: CAL13_13750
symbol: rdgC
gene_biotype: protein_coding
description:
  Recombination-associated protein RdgC; May be involved in recombination; Belongs to the RdgC family.


ensembl_gene_id: CAL13_13760
symbol: ARP87156.1
gene_biotype: protein_coding
description:
  Aspartate carbamoyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.


ensembl_gene_id: CAL13_13820
symbol: ARP87167.1
gene_biotype: protein_coding
description:
  2-aminoadipate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_13830
symbol: ARP87169.1
gene_biotype: protein_coding
description:
  DUF3309 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_13865
symbol: ARP87175.1
gene_biotype: protein_coding
description:
  Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S11 family.


ensembl_gene_id: CAL13_13875
symbol: ARP87177.1
gene_biotype: protein_coding
description:
  Oligopeptide transporter, OPT family; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_13885
symbol: ARP87178.1
gene_biotype: protein_coding
description:
  DUF3606 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_13890
symbol: ARP87179.1
gene_biotype: protein_coding
description:
  Mechanosensitive ion channel protein MscS; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_13915
symbol: ARP87183.1
gene_biotype: protein_coding
description:
  Phosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_13935
symbol: rpoD
gene_biotype: protein_coding
description:
  RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.


ensembl_gene_id: CAL13_13940
symbol: dnaG
gene_biotype: protein_coding
description:
  DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.


ensembl_gene_id: CAL13_13945
symbol: rpsU
gene_biotype: protein_coding
description:
  30S ribosomal protein S21; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bS21 family.


ensembl_gene_id: CAL13_13950
symbol: ARP87188.1
gene_biotype: protein_coding
description:
  Nicotinate phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_13955
symbol: purA
gene_biotype: protein_coding
description:
  Adenylosuccinate synthase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.


ensembl_gene_id: CAL13_13960
symbol: hisZ
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase regulatory subunit; Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine.


ensembl_gene_id: CAL13_13975
symbol: hflX
gene_biotype: protein_coding
description:
  GTPase HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.


ensembl_gene_id: CAL13_13980
symbol: hfq
gene_biotype: protein_coding
description:
  RNA chaperone Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family.


ensembl_gene_id: CAL13_13990
symbol: der
gene_biotype: protein_coding
description:
  Ribosome biogenesis GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.


ensembl_gene_id: CAL13_13995
symbol: bamB
gene_biotype: protein_coding
description:
  Outer membrane protein assembly factor BamB; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.


ensembl_gene_id: CAL13_14005
symbol: hisS
gene_biotype: protein_coding
description:
  histidine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_14010
symbol: ispG
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family.


ensembl_gene_id: CAL13_14020
symbol: rlmN
gene_biotype: protein_coding
description:
  23S rRNA (adenine(2503)-C(2))-methyltransferase; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family.


ensembl_gene_id: CAL13_14025
symbol: ndk
gene_biotype: protein_coding
description:
  Nucleoside-diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.


ensembl_gene_id: CAL13_14030
symbol: valS
gene_biotype: protein_coding
description:
  valine--tRNA ligase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.


ensembl_gene_id: CAL13_14035
symbol: trmD
gene_biotype: protein_coding
description:
  tRNA (guanosine(37)-N1)-methyltransferase TrmD; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.


ensembl_gene_id: CAL13_14040
symbol: ARP88727.1
gene_biotype: protein_coding
description:
  Ribosome maturation factor RimM; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_14045
symbol: rpsP
gene_biotype: protein_coding
description:
  30S ribosomal protein S16; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bS16 family.


ensembl_gene_id: CAL13_14050
symbol: ARP87204.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sulfur carrier protein TusA family.


ensembl_gene_id: CAL13_14055
symbol: alaS
gene_biotype: protein_coding
description:
  alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.


ensembl_gene_id: CAL13_14065
symbol: ARP87206.1
gene_biotype: protein_coding
description:
  Prepilin-type cleavage/methylation domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_14070
symbol: ARP88729.1
gene_biotype: protein_coding
description:
  General secretion pathway protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_14100
symbol: ARP87210.1
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_14110
symbol: ARP87212.1
gene_biotype: protein_coding
description:
  CDP-6-deoxy-delta-3,4-glucoseen reductase; Catalyzes the formation of 3,6-dideoxy-D-glycero-D-glycero-4-hexulose; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_14120
symbol: ARP88732.1
gene_biotype: protein_coding
description:
  MOSC domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_14125
symbol: ARP87214.1
gene_biotype: protein_coding
description:
  Ectoine hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_14130
symbol: ectC
gene_biotype: protein_coding
description:
  L-ectoine synthase; Catalyzes the circularization of gamma-N-acetyl-alpha,gamma- diaminobutyric acid (ADABA) to ectoine (1,4,5,6-tetrahydro-2-methyl-4- pyrimidine carboxylic acid), which is an excellent osmoprotectant.


ensembl_gene_id: CAL13_14135
symbol: ARP87216.1
gene_biotype: protein_coding
description:
  Diaminobutyrate--2-oxoglutarate transaminase; Catalyzes reversively the conversion of L-aspartate beta- semialdehyde (ASA) to L-2,4-diaminobutyrate (DABA) by transamination with L-glutamate; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: CAL13_14140
symbol: ARP87217.1
gene_biotype: protein_coding
description:
  Diaminobutyrate acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_14150
symbol: parC
gene_biotype: protein_coding
description:
  DNA topoisomerase IV subunit A; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase GyrA/ParC subunit family. ParC type 1 subfamily.


ensembl_gene_id: CAL13_14155
symbol: parE
gene_biotype: protein_coding
description:
  DNA topoisomerase IV subunit B; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 1 subfamily.


ensembl_gene_id: CAL13_14160
symbol: ARP87221.1
gene_biotype: protein_coding
description:
  Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thioredoxin family.


ensembl_gene_id: CAL13_14165
symbol: rho
gene_biotype: protein_coding
description:
  Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.


ensembl_gene_id: CAL13_14170
symbol: ARP87223.1
gene_biotype: protein_coding
description:
  TIGR02099 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_14175
symbol: glnE
gene_biotype: protein_coding
description:
  Bifunctional glutamine synthetase adenylyltransferase/deadenyltransferase; Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of [...]


ensembl_gene_id: CAL13_14180
symbol: queH
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr).


ensembl_gene_id: CAL13_14190
symbol: clpB
gene_biotype: protein_coding
description:
  ATP-dependent chaperone ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.


ensembl_gene_id: CAL13_14195
symbol: ARP87227.1
gene_biotype: protein_coding
description:
  Malate synthase A; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the malate synthase family.


ensembl_gene_id: CAL13_14210
symbol: folE
gene_biotype: protein_coding
description:
  GTP cyclohydrolase I FolE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_14215
symbol: ARP88735.1
gene_biotype: protein_coding
description:
  Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 3 family.


ensembl_gene_id: CAL13_14220
symbol: ARP88736.1
gene_biotype: protein_coding
description:
  Calpastatin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_14225
symbol: ARP87230.1
gene_biotype: protein_coding
description:
  ADP-ribose pyrophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_14240
symbol: ARP87231.1
gene_biotype: protein_coding
description:
  Peptidase S16; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_14245
symbol: ARP87232.1
gene_biotype: protein_coding
description:
  Glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_14250
symbol: ARP87233.1
gene_biotype: protein_coding
description:
  Glycogen debranching protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_14260
symbol: ARP87235.1
gene_biotype: protein_coding
description:
  Alpha,alpha-trehalose-phosphate synthase (UDP-forming); Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-alpha-D- glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose- 6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor; Belongs to the glycosyltransferase 20 family.


ensembl_gene_id: CAL13_14280
symbol: ARP87239.1
gene_biotype: protein_coding
description:
  Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S1C family.


ensembl_gene_id: CAL13_14300
symbol: ARP87242.1
gene_biotype: protein_coding
description:
  Heat-shock protein Hsp20; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the small heat shock protein (HSP20) family.


ensembl_gene_id: CAL13_14320
symbol: queF
gene_biotype: protein_coding
description:
  NADPH-dependent 7-cyano-7-deazaguanine reductase QueF; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1).


ensembl_gene_id: CAL13_14325
symbol: ARP87246.1
gene_biotype: protein_coding
description:
  CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: CAL13_14330
symbol: uvrC
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.


ensembl_gene_id: CAL13_14335
symbol: nagZ
gene_biotype: protein_coding
description:
  beta-N-acetylhexosaminidase; Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide- linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N- acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides. Belongs to the glycosyl hydrolase 3 family. NagZ subfamily.


ensembl_gene_id: CAL13_14340
symbol: acpS
gene_biotype: protein_coding
description:
  holo-ACP synthase; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family.


ensembl_gene_id: CAL13_14345
symbol: pdxJ
gene_biotype: protein_coding
description:
  Pyridoxine 5'-phosphate synthase; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate.


ensembl_gene_id: CAL13_14385
symbol: ARP87257.1
gene_biotype: protein_coding
description:
  Catalyzes the formation of malonyl-CoA from malonate and CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_14395
symbol: ARP87259.1
gene_biotype: protein_coding
description:
  malonyl-CoA decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_14405
symbol: ARP87261.1
gene_biotype: protein_coding
description:
  Spermidine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_14410
symbol: ARP87262.1
gene_biotype: protein_coding
description:
  acetyl-CoA acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family.


ensembl_gene_id: CAL13_14415
symbol: ARP87263.1
gene_biotype: protein_coding
description:
  4-oxalocrotonate tautomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 4-oxalocrotonate tautomerase family.


ensembl_gene_id: CAL13_14425
symbol: ARP87265.1
gene_biotype: protein_coding
description:
  Bcr/CflA family drug resistance efflux transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_14430
symbol: rpmB
gene_biotype: protein_coding
description:
  50S ribosomal protein L28; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL28 family.


ensembl_gene_id: CAL13_14435
symbol: rpmG
gene_biotype: protein_coding
description:
  50S ribosomal protein L33; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL33 family.


ensembl_gene_id: CAL13_14445
symbol: ARP87268.1
gene_biotype: protein_coding
description:
  Aldehyde dehydrogenase (NADP(+)); Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_14480
symbol: leuS
gene_biotype: protein_coding
description:
  leucine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: CAL13_14495
symbol: proA
gene_biotype: protein_coding
description:
  Glutamate-5-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.


ensembl_gene_id: CAL13_14505
symbol: ARP87279.1
gene_biotype: protein_coding
description:
  RNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the methyltransferase superfamily.


ensembl_gene_id: CAL13_14525
symbol: ARP87283.1
gene_biotype: protein_coding
description:
  RDD family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_14545
symbol: ARP87287.1
gene_biotype: protein_coding
description:
  UDP-2,3-diacylglucosamine hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_14550
symbol: ARP87288.1
gene_biotype: protein_coding
description:
  AMP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_14555
symbol: ARP87289.1
gene_biotype: protein_coding
description:
  Gamma carbonic anhydrase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_14560
symbol: ARP87290.1
gene_biotype: protein_coding
description:
  Hsp33 family molecular chaperone; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress; Belongs to the HSP33 family.


ensembl_gene_id: CAL13_14570
symbol: ftsB
gene_biotype: protein_coding
description:
  Cell division protein FtsB; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic.


ensembl_gene_id: CAL13_14575
symbol: eno
gene_biotype: protein_coding
description:
  Phosphopyruvate hydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.


ensembl_gene_id: CAL13_14580
symbol: ARP87294.1
gene_biotype: protein_coding
description:
  3-deoxy-8-phosphooctulonate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_14585
symbol: pyrG
gene_biotype: protein_coding
description:
  CTP synthetase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.


ensembl_gene_id: CAL13_14595
symbol: ARP87297.1
gene_biotype: protein_coding
description:
  Xaa-Pro aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_14600
symbol: ARP87298.1
gene_biotype: protein_coding
description:
  Aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_14610
symbol: ARP87300.1
gene_biotype: protein_coding
description:
  Glutathione ABC transporter permease GsiD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_14615
symbol: ARP87301.1
gene_biotype: protein_coding
description:
  Glutathione ABC transporter permease GsiC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_14620
symbol: ARP87302.1
gene_biotype: protein_coding
description:
  Glutathione ABC transporter substrate-binding protein GsiB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_14630
symbol: ARP87303.1
gene_biotype: protein_coding
description:
  Beta-aspartyl-peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_14645
symbol: clsB
gene_biotype: protein_coding
description:
  Cardiolipin synthase B; Catalyzes the phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol.


ensembl_gene_id: CAL13_14655
symbol: ARP87308.1
gene_biotype: protein_coding
description:
  succinyl-CoA--3-ketoacid-CoA transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_14670
symbol: ARP87310.1
gene_biotype: protein_coding
description:
  Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone.


ensembl_gene_id: CAL13_14685
symbol: ARP87313.1
gene_biotype: protein_coding
description:
  Low-specificity L-threonine aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_14695
symbol: acsA
gene_biotype: protein_coding
description:
  acetate--CoA ligase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family.


ensembl_gene_id: CAL13_14700
symbol: ARP87315.1
gene_biotype: protein_coding
description:
  Hydroxyproline-2-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the proline racemase family.


ensembl_gene_id: CAL13_14715
symbol: ARP87318.1
gene_biotype: protein_coding
description:
  propionate--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_14755
symbol: CAL13_14755
gene_biotype: protein_coding
description:
  VapC toxin family PIN domain ribonuclease; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: CAL13_14775
symbol: ARP88749.1
gene_biotype: protein_coding
description:
  LPS export ABC transporter permease LptF; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_14780
symbol: pepA
gene_biotype: protein_coding
description:
  Leucyl aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.


ensembl_gene_id: CAL13_14785
symbol: ARP87328.1
gene_biotype: protein_coding
description:
  DNA polymerase III subunit chi; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_14795
symbol: ARP87330.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the BI1 family.


ensembl_gene_id: CAL13_14815
symbol: era
gene_biotype: protein_coding
description:
  GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.


ensembl_gene_id: CAL13_14820
symbol: rnc
gene_biotype: protein_coding
description:
  Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.


ensembl_gene_id: CAL13_14825
symbol: ARP87335.1
gene_biotype: protein_coding
description:
  Signal peptidase I; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S26 family.


ensembl_gene_id: CAL13_14830
symbol: lepA
gene_biotype: protein_coding
description:
  Elongation factor 4; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.


ensembl_gene_id: CAL13_14835
symbol: ARP87337.1
gene_biotype: protein_coding
description:
  Serine peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S1C family.


ensembl_gene_id: CAL13_14840
symbol: ARP87338.1
gene_biotype: protein_coding
description:
  Siderophore-interacting protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_14850
symbol: ARP87340.1
gene_biotype: protein_coding
description:
  RNA polymerase sigma factor RpoE; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: CAL13_14860
symbol: ARP87342.1
gene_biotype: protein_coding
description:
  Beta-ketoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.


ensembl_gene_id: CAL13_14870
symbol: fabG
gene_biotype: protein_coding
description:
  3-oxoacyl-ACP reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: CAL13_14875
symbol: ARP87345.1
gene_biotype: protein_coding
description:
  [acyl-carrier-protein] S-malonyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_14880
symbol: fabH
gene_biotype: protein_coding
description:
  3-oxoacyl-ACP synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.


ensembl_gene_id: CAL13_14885
symbol: plsX
gene_biotype: protein_coding
description:
  Phosphate acyltransferase; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.


ensembl_gene_id: CAL13_14890
symbol: rpmF
gene_biotype: protein_coding
description:
  50S ribosomal protein L32; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL32 family.


ensembl_gene_id: CAL13_14900
symbol: ARP87350.1
gene_biotype: protein_coding
description:
  Septum formation protein Maf; Nucleoside triphosphate pyrophosphatase that hydrolyzes 7- methyl-GTP (m(7)GTP). May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids; Belongs to the Maf family. YceF subfamily.


ensembl_gene_id: CAL13_14915
symbol: msrQ
gene_biotype: protein_coding
description:
  Sulfoxide reductase heme-binding subunit YedZ; Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalyti [...]


ensembl_gene_id: CAL13_14920
symbol: msrP
gene_biotype: protein_coding
description:
  Mononuclear molybdenum enzyme YedY; Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce bot [...]


ensembl_gene_id: CAL13_14940
symbol: ARP87357.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety; Belongs to the PagL family.


ensembl_gene_id: CAL13_14945
symbol: accD
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase, carboxyltransferase subunit beta; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.


ensembl_gene_id: CAL13_14950
symbol: trpA
gene_biotype: protein_coding
description:
  Tryptophan synthase subunit alpha; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.


ensembl_gene_id: CAL13_14955
symbol: trpB
gene_biotype: protein_coding
description:
  Tryptophan synthase subunit beta; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.


ensembl_gene_id: CAL13_14960
symbol: ARP87361.1
gene_biotype: protein_coding
description:
  Acetylornithine deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_14965
symbol: ARP87362.1
gene_biotype: protein_coding
description:
  GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.


ensembl_gene_id: CAL13_14970
symbol: ARP87363.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MtfA family.


ensembl_gene_id: CAL13_15005
symbol: ARP87369.1
gene_biotype: protein_coding
description:
  Polar amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_15025
symbol: pncB
gene_biotype: protein_coding
description:
  Nicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family.


ensembl_gene_id: CAL13_15030
symbol: ARP87374.1
gene_biotype: protein_coding
description:
  Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.


ensembl_gene_id: CAL13_15040
symbol: ARP87376.1
gene_biotype: protein_coding
description:
  Polyhydroxyalkanoate depolymerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_15050
symbol: nth
gene_biotype: protein_coding
description:
  Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.


ensembl_gene_id: CAL13_15080
symbol: ARP87384.1
gene_biotype: protein_coding
description:
  Peptidase M4 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_15110
symbol: efp
gene_biotype: protein_coding
description:
  Elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.


ensembl_gene_id: CAL13_15140
symbol: ARP87395.1
gene_biotype: protein_coding
description:
  Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_15150
symbol: ARP87397.1
gene_biotype: protein_coding
description:
  Magnesium transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_15185
symbol: ARP87403.1
gene_biotype: protein_coding
description:
  Monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_15195
symbol: ARP87405.1
gene_biotype: protein_coding
description:
  Inositol monophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_15200
symbol: ARP87406.1
gene_biotype: protein_coding
description:
  Serine acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_15205
symbol: cobB
gene_biotype: protein_coding
description:
  NAD-dependent deacetylase; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class II subfamily.


ensembl_gene_id: CAL13_15225
symbol: ARP87411.1
gene_biotype: protein_coding
description:
  acyl-CoA synthetase; Activates fatty acids by binding to coenzyme A; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_15230
symbol: ARP87412.1
gene_biotype: protein_coding
description:
  acetyl-CoA acetyltransferase; Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_15255
symbol: ARP87416.1
gene_biotype: protein_coding
description:
  UDP-glucose 4-epimerase GalE; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NAD(P)-dependent epimerase/dehydratase family.


ensembl_gene_id: CAL13_15265
symbol: ARP87418.1
gene_biotype: protein_coding
description:
  Tyrosine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_15270
symbol: ARP87419.1
gene_biotype: protein_coding
description:
  Multidrug MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_15275
symbol: ARP88756.1
gene_biotype: protein_coding
description:
  Undecaprenyl-phosphate glucose phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_15280
symbol: ARP87420.1
gene_biotype: protein_coding
description:
  GDP-mannose mannosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_15285
symbol: ARP87421.1
gene_biotype: protein_coding
description:
  Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the mannose-6-phosphate isomerase type 2 family.


ensembl_gene_id: CAL13_15290
symbol: gmd
gene_biotype: protein_coding
description:
  GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.


ensembl_gene_id: CAL13_15295
symbol: fcl
gene_biotype: protein_coding
description:
  GDP-fucose synthetase; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction.


ensembl_gene_id: CAL13_15300
symbol: ARP87424.1
gene_biotype: protein_coding
description:
  Polysaccharide biosynthesis family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_15325
symbol: ARP87429.1
gene_biotype: protein_coding
description:
  Colanic acid biosynthesis acetyltransferase WcaF; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_15330
symbol: ARP88757.1
gene_biotype: protein_coding
description:
  Colanic acid biosynthesis glycosyltransferase WcaI; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_15370
symbol: CAL13_15370
gene_biotype: protein_coding
description:
  SDR family oxidoreductase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_15405
symbol: ARP87440.1
gene_biotype: protein_coding
description:
  Succinate dehydrogenase/fumarate reductase flavoprotein subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_15410
symbol: ARP87441.1
gene_biotype: protein_coding
description:
  Fumarate hydrolyase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_15415
symbol: ARP87442.1
gene_biotype: protein_coding
description:
  Fumarate hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_15430
symbol: ARP87445.1
gene_biotype: protein_coding
description:
  Succinate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_15435
symbol: ARP87446.1
gene_biotype: protein_coding
description:
  Succinate dehydrogenase/fumarate reductase iron-sulfur subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.


ensembl_gene_id: CAL13_15450
symbol: ARP87449.1
gene_biotype: protein_coding
description:
  Cytochrome c oxidase subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_15470
symbol: ARP87452.1
gene_biotype: protein_coding
description:
  Aspartate kinase; Catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aspartokinase family.


ensembl_gene_id: CAL13_15475
symbol: ARP87453.1
gene_biotype: protein_coding
description:
  tRNA lysidine(34) synthetase TilS; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_15480
symbol: accA
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase carboxyl transferase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.


ensembl_gene_id: CAL13_15485
symbol: ARP87454.1
gene_biotype: protein_coding
description:
  DNA-3-methyladenine glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_15490
symbol: cysS
gene_biotype: protein_coding
description:
  cysteine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: CAL13_15500
symbol: ARP88762.1
gene_biotype: protein_coding
description:
  Cyclophilin; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.


ensembl_gene_id: CAL13_15505
symbol: lpxH
gene_biotype: protein_coding
description:
  UDP-2,3-diacylglucosamine diphosphatase; Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: CAL13_15510
symbol: uppP
gene_biotype: protein_coding
description:
  Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.


ensembl_gene_id: CAL13_15525
symbol: ARP88763.1
gene_biotype: protein_coding
description:
  RNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_15550
symbol: ARP87463.1
gene_biotype: protein_coding
description:
  NADPH-dependent FMN reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_15560
symbol: ARP88765.1
gene_biotype: protein_coding
description:
  Ku family containing domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_15575
symbol: ARP87466.1
gene_biotype: protein_coding
description:
  Cytochrome D ubiquinol oxidase subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_15590
symbol: mutS
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.


ensembl_gene_id: CAL13_15610
symbol: dapA
gene_biotype: protein_coding
description:
  4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).


ensembl_gene_id: CAL13_15615
symbol: ARP87472.1
gene_biotype: protein_coding
description:
  Site-2 protease family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_15620
symbol: ARP87473.1
gene_biotype: protein_coding
description:
  threonylcarbamoyl-AMP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SUA5 family.


ensembl_gene_id: CAL13_15665
symbol: ARP87482.1
gene_biotype: protein_coding
description:
  O-acetylserine/cysteine exporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_15680
symbol: ARP87484.1
gene_biotype: protein_coding
description:
  Cardiolipin synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_15685
symbol: ARP87485.1
gene_biotype: protein_coding
description:
  Nitrate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_15690
symbol: ARP87486.1
gene_biotype: protein_coding
description:
  Nitrate ABC transporter, permease protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_15700
symbol: ARP87488.1
gene_biotype: protein_coding
description:
  Assimilatory nitrite reductase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_15705
symbol: ARP87489.1
gene_biotype: protein_coding
description:
  Nitrate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.


ensembl_gene_id: CAL13_15710
symbol: ARP87490.1
gene_biotype: protein_coding
description:
  uroporphyrinogen-III C-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_15715
symbol: ARP88769.1
gene_biotype: protein_coding
description:
  DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial histone-like protein family.


ensembl_gene_id: CAL13_15720
symbol: ARP87491.1
gene_biotype: protein_coding
description:
  Sulfite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_15730
symbol: ARP87493.1
gene_biotype: protein_coding
description:
  Calcium:proton antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_15755
symbol: ARP87498.1
gene_biotype: protein_coding
description:
  Hydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_15825
symbol: ARP87509.1
gene_biotype: protein_coding
description:
  General stress protein CsbD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_15830
symbol: ARP87510.1
gene_biotype: protein_coding
description:
  Mn-containing catalase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_15850
symbol: ARP87513.1
gene_biotype: protein_coding
description:
  FAD/NAD(P)-binding oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_15895
symbol: ARP87521.1
gene_biotype: protein_coding
description:
  Phospholipase; Hydrolysis of phosphatidylcholine with phospholipase A2 (EC 3.1.1.4) and phospholipase A1 (EC 3.1.1.32) activities. Belongs to the phospholipase A1 family.


ensembl_gene_id: CAL13_15900
symbol: ARP87522.1
gene_biotype: protein_coding
description:
  MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the major facilitator superfamily.


ensembl_gene_id: CAL13_15920
symbol: ARP87526.1
gene_biotype: protein_coding
description:
  Peptidase M38; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_15925
symbol: ARP87527.1
gene_biotype: protein_coding
description:
  Amino acid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_15985
symbol: ARP87537.1
gene_biotype: protein_coding
description:
  Sodium transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_16030
symbol: ARP87546.1
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_16035
symbol: ARP88775.1
gene_biotype: protein_coding
description:
  Sugar kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_16040
symbol: ARP88776.1
gene_biotype: protein_coding
description:
  Tagatose-bisphosphate aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_16045
symbol: ARP88777.1
gene_biotype: protein_coding
description:
  Nitrite reductase (NAD(P)H); Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.


ensembl_gene_id: CAL13_16050
symbol: ARP88778.1
gene_biotype: protein_coding
description:
  Nitrite reductase (NAD(P)H) small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_16055
symbol: ARP87547.1
gene_biotype: protein_coding
description:
  Antitermination regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_16060
symbol: ARP87548.1
gene_biotype: protein_coding
description:
  Dolichyl-phosphate-mannose--protein mannosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_16080
symbol: pstB
gene_biotype: protein_coding
description:
  Phosphate ABC transporter ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.


ensembl_gene_id: CAL13_16085
symbol: ARP87552.1
gene_biotype: protein_coding
description:
  Phosphate ABC transporter, permease protein PstA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_16090
symbol: ARP87553.1
gene_biotype: protein_coding
description:
  Phosphate ABC transporter permease subunit PstC; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: CAL13_16095
symbol: ARP87554.1
gene_biotype: protein_coding
description:
  Phosphate ABC transporter substrate-binding protein PstS; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family.


ensembl_gene_id: CAL13_16100
symbol: ppk
gene_biotype: protein_coding
description:
  Polyphosphate kinase 1; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.


ensembl_gene_id: CAL13_16105
symbol: ARP87556.1
gene_biotype: protein_coding
description:
  Exopolyphosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_16115
symbol: glmM
gene_biotype: protein_coding
description:
  Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.


ensembl_gene_id: CAL13_16120
symbol: ARP87559.1
gene_biotype: protein_coding
description:
  Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives.


ensembl_gene_id: CAL13_16125
symbol: ftsH
gene_biotype: protein_coding
description:
  Cell division protein FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family.  In the central section; belongs to the AAA ATPase family.


ensembl_gene_id: CAL13_16130
symbol: rlmE
gene_biotype: protein_coding
description:
  rRNA methyltransferase; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit.


ensembl_gene_id: CAL13_16140
symbol: greA
gene_biotype: protein_coding
description:
  Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.


ensembl_gene_id: CAL13_16145
symbol: ARP87564.1
gene_biotype: protein_coding
description:
  Pyrimidine utilization transport protein G; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_16150
symbol: ARP87565.1
gene_biotype: protein_coding
description:
  Histidine phosphatase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the phosphoglycerate mutase family.


ensembl_gene_id: CAL13_16165
symbol: carB
gene_biotype: protein_coding
description:
  Carbamoyl phosphate synthase large subunit; Four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_16170
symbol: carA
gene_biotype: protein_coding
description:
  Carbamoyl-phosphate synthase small subunit; Catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_16185
symbol: ARP87570.1
gene_biotype: protein_coding
description:
  Mannosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_16195
symbol: ARP87572.1
gene_biotype: protein_coding
description:
  formyl-CoA transferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CoA-transferase III family.


ensembl_gene_id: CAL13_16200
symbol: recR
gene_biotype: protein_coding
description:
  Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.


ensembl_gene_id: CAL13_16205
symbol: ARP87574.1
gene_biotype: protein_coding
description:
  YbaB/EbfC family nucleoid-associated protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.


ensembl_gene_id: CAL13_16210
symbol: ARP87575.1
gene_biotype: protein_coding
description:
  DNA polymerase III subunit gamma/tau; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_16270
symbol: ARP87584.1
gene_biotype: protein_coding
description:
  D-alanyl-D-alanine endopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_16280
symbol: ARP87586.1
gene_biotype: protein_coding
description:
  aminoacyl-tRNA deacylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily.


ensembl_gene_id: CAL13_16295
symbol: fumC
gene_biotype: protein_coding
description:
  Fumarate hydratase, class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.


ensembl_gene_id: CAL13_16300
symbol: ARP88781.1
gene_biotype: protein_coding
description:
  tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_16315
symbol: mutL
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.


ensembl_gene_id: CAL13_16320
symbol: miaA
gene_biotype: protein_coding
description:
  tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.


ensembl_gene_id: CAL13_16325
symbol: purM
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine cyclo-ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_16330
symbol: ARP87595.1
gene_biotype: protein_coding
description:
  DnaA regulatory inactivator Hda; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DnaA family.


ensembl_gene_id: CAL13_16340
symbol: pcnB
gene_biotype: protein_coding
description:
  poly(A) polymerase; Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control. Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.


ensembl_gene_id: CAL13_16345
symbol: ARP87598.1
gene_biotype: protein_coding
description:
  2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CAL13_16350
symbol: ARP87599.1
gene_biotype: protein_coding
description:
  Fumarate hydratase; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.


ensembl_gene_id: CAL13_16355
symbol: ARP87600.1
gene_biotype: protein_coding
description:
  enoyl-CoA hydratase; Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family.


