# geneInfo

ensembl_gene_id: HMPREF0549_0021
symbol: dgoD
gene_biotype: protein_coding
description:
  Mandelate racemase/muconate lactonizing enzyme, N-terminal domain protein; COG: COG4948; Belongs to the mandelate racemase/muconate lactonizing enzyme family.


ensembl_gene_id: HMPREF0549_0022
symbol: nth
gene_biotype: protein_coding
description:
  Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.


ensembl_gene_id: HMPREF0549_0024
symbol: gabT
gene_biotype: protein_coding
description:
  Putative 4-aminobutyrate transaminase; COG: COG0160; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: HMPREF0549_0039
symbol: EEJ41513.1
gene_biotype: protein_coding
description:
  DNA (cytosine-5-)-methyltransferase; COG: COG0863; Belongs to the N(4)/N(6)-methyltransferase family.


ensembl_gene_id: HMPREF0549_0043
symbol: hmgA
gene_biotype: protein_coding
description:
  hydroxymethylglutaryl-CoA reductase, degradative; COG: COG1257; Belongs to the HMG-CoA reductase family.


ensembl_gene_id: HMPREF0549_0048
symbol: metG
gene_biotype: protein_coding
description:
  methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 2B subfamily.


ensembl_gene_id: HMPREF0549_0050
symbol: rnmV
gene_biotype: protein_coding
description:
  Ribonuclease M5; Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step.


ensembl_gene_id: HMPREF0549_0051
symbol: ksgA
gene_biotype: protein_coding
description:
  Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.


ensembl_gene_id: HMPREF0549_0053
symbol: ispE
gene_biotype: protein_coding
description:
  4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.


ensembl_gene_id: HMPREF0549_0055
symbol: glmU
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain.


ensembl_gene_id: HMPREF0549_0056
symbol: prs
gene_biotype: protein_coding
description:
  Ribose-phosphate diphosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.


ensembl_gene_id: HMPREF0549_0063
symbol: rpoE
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase, delta subunit; Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; Belongs to the RpoE family.


ensembl_gene_id: HMPREF0549_0064
symbol: pyrG
gene_biotype: protein_coding
description:
  CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.


ensembl_gene_id: HMPREF0549_0065
symbol: murA
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.


ensembl_gene_id: HMPREF0549_0071
symbol: yfkJ
gene_biotype: protein_coding
description:
  Low molecular weight phosphotyrosine protein phosphatase; COG: COG0394; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.


ensembl_gene_id: HMPREF0549_0074
symbol: murF
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.


ensembl_gene_id: HMPREF0549_0075
symbol: cshA
gene_biotype: protein_coding
description:
  DEAD/DEAH box helicase; DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA-dependent ATPase activity; Belongs to the DEAD box helicase family. CshA subfamily.


ensembl_gene_id: HMPREF0549_0077
symbol: dltC
gene_biotype: protein_coding
description:
  D-alanine--poly(phosphoribitol) ligase, subunit 2; Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC- carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall.


ensembl_gene_id: HMPREF0549_0078
symbol: EEJ41464.1
gene_biotype: protein_coding
description:
  MBOAT family protein; Could be involved in the transport of activated D-alanine through the membrane.


ensembl_gene_id: HMPREF0549_0079
symbol: dltA
gene_biotype: protein_coding
description:
  D-alanine--poly(phosphoribitol) ligase, subunit 1; Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D- alanyl carrier protein (Dcp) DltC. In an ATP-dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall. Belongs to [...]


ensembl_gene_id: HMPREF0549_0080
symbol: acpS
gene_biotype: protein_coding
description:
  Holo-[acyl-carrier-protein] synthase; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family.


ensembl_gene_id: HMPREF0549_0081
symbol: alr
gene_biotype: protein_coding
description:
  Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.


ensembl_gene_id: HMPREF0549_0082
symbol: EEJ41468.1
gene_biotype: protein_coding
description:
  Putative hydroxymethylpyrimidine transporter CytX; Belongs to the purine-cytosine permease (2.A.39) family.


ensembl_gene_id: HMPREF0549_0085
symbol: pth
gene_biotype: protein_coding
description:
  aminoacyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.


ensembl_gene_id: HMPREF0549_0086
symbol: mfd
gene_biotype: protein_coding
description:
  Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.


ensembl_gene_id: HMPREF0549_0090
symbol: tilS
gene_biotype: protein_coding
description:
  tRNA(Ile)-lysidine synthetase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine.


ensembl_gene_id: HMPREF0549_0091
symbol: hpt
gene_biotype: protein_coding
description:
  Hypoxanthine phosphoribosyltransferase; COG: COG0634; Belongs to the purine/pyrimidine phosphoribosyltransferase family.


ensembl_gene_id: HMPREF0549_0092
symbol: hflB
gene_biotype: protein_coding
description:
  ATP-dependent metallopeptidase HflB; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family.  In the central section; belongs to the AAA ATPase family.


ensembl_gene_id: HMPREF0549_0093
symbol: hslO
gene_biotype: protein_coding
description:
  Chaperonin HslO; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress.


ensembl_gene_id: HMPREF0549_0094
symbol: EEJ41480.1
gene_biotype: protein_coding
description:
  TIM-barrel protein, nifR3 family; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.


ensembl_gene_id: HMPREF0549_0130
symbol: EEJ41415.1
gene_biotype: protein_coding
description:
  Site-specific recombinase, phage integrase family; COG: COG0582; Belongs to the 'phage' integrase family.


ensembl_gene_id: HMPREF0549_0170
symbol: mecA
gene_biotype: protein_coding
description:
  Negative regulator of genetic competence (MecA); Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis.


ensembl_gene_id: HMPREF0549_0175
symbol: ppnK
gene_biotype: protein_coding
description:
  NAD(+)/NADH kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.


ensembl_gene_id: HMPREF0549_0176
symbol: EEJ41300.1
gene_biotype: protein_coding
description:
  Pseudouridine synthase, RluA family; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: HMPREF0549_0180
symbol: EEJ41304.1
gene_biotype: protein_coding
description:
  RNA methyltransferase, TrmH family, group 2; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.


ensembl_gene_id: HMPREF0549_0185
symbol: mraW
gene_biotype: protein_coding
description:
  S-adenosyl-methyltransferase MraW; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.


ensembl_gene_id: HMPREF0549_0188
symbol: mraY
gene_biotype: protein_coding
description:
  phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.


ensembl_gene_id: HMPREF0549_0189
symbol: murD
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.


ensembl_gene_id: HMPREF0549_0190
symbol: murG
gene_biotype: protein_coding
description:
  Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.


ensembl_gene_id: HMPREF0549_0191
symbol: divIB
gene_biotype: protein_coding
description:
  Cell division protein FtsQ; Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex; Belongs to the FtsQ/DivIB family. DivIB subfamily.


ensembl_gene_id: HMPREF0549_0192
symbol: ftsA
gene_biotype: protein_coding
description:
  Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.


ensembl_gene_id: HMPREF0549_0193
symbol: ftsZ
gene_biotype: protein_coding
description:
  Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.


ensembl_gene_id: HMPREF0549_0194
symbol: sepF
gene_biotype: protein_coding
description:
  Hypothetical protein; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA.


ensembl_gene_id: HMPREF0549_0198
symbol: ileS
gene_biotype: protein_coding
description:
  isoleucine--tRNA ligase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily.


ensembl_gene_id: HMPREF0549_0202
symbol: mtnN
gene_biotype: protein_coding
description:
  MTA/SAH nucleosidase; Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'- methylthioribose and S-ribosylhomocysteine, respectively. Belongs to the PNP/UDP phosphorylase family. MtnN subfamily.


ensembl_gene_id: HMPREF0549_0205
symbol: trmU
gene_biotype: protein_coding
description:
  tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.


ensembl_gene_id: HMPREF0549_0208
symbol: recD2
gene_biotype: protein_coding
description:
  Helicase, RecD/TraA family; DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity; Belongs to the RecD family. RecD-like subfamily.


ensembl_gene_id: HMPREF0549_0217
symbol: def
gene_biotype: protein_coding
description:
  Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.


ensembl_gene_id: HMPREF0549_0218
symbol: pdhA
gene_biotype: protein_coding
description:
  Pyruvate dehydrogenase E1 component, alpha subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3).


ensembl_gene_id: HMPREF0549_0228
symbol: coaD
gene_biotype: protein_coding
description:
  Pantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.


ensembl_gene_id: HMPREF0549_0235
symbol: rpsO
gene_biotype: protein_coding
description:
  Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.


ensembl_gene_id: HMPREF0549_0236
symbol: rnj
gene_biotype: protein_coding
description:
  Hypothetical protein; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay.


ensembl_gene_id: HMPREF0549_0238
symbol: tuf
gene_biotype: protein_coding
description:
  Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.


ensembl_gene_id: HMPREF0549_0239
symbol: tig
gene_biotype: protein_coding
description:
  Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.


ensembl_gene_id: HMPREF0549_0240
symbol: clpX
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease, ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.


ensembl_gene_id: HMPREF0549_0241
symbol: ysxC
gene_biotype: protein_coding
description:
  Ribosome biogenesis GTP-binding protein YsxC; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.


ensembl_gene_id: HMPREF0549_0244
symbol: uvrC
gene_biotype: protein_coding
description:
  Excinuclease ABC, C subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.


ensembl_gene_id: HMPREF0549_0245
symbol: cgtA
gene_biotype: protein_coding
description:
  Obg family GTPase CgtA; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.


ensembl_gene_id: HMPREF0549_0246
symbol: rnz
gene_biotype: protein_coding
description:
  Ribonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family.


ensembl_gene_id: HMPREF0549_0247
symbol: EEJ41371.1
gene_biotype: protein_coding
description:
  Oxidoreductase, short chain dehydrogenase/reductase family protein; COG: COG0300; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: HMPREF0549_0249
symbol: apt
gene_biotype: protein_coding
description:
  Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.


ensembl_gene_id: HMPREF0549_0253
symbol: hsdR
gene_biotype: protein_coding
description:
  Type I site-specific deoxyribonuclease, HsdR family; Subunit R is required for both nuclease and ATPase activities, but not for modification.


ensembl_gene_id: HMPREF0549_0270
symbol: lexA
gene_biotype: protein_coding
description:
  Repressor LexA; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair.


ensembl_gene_id: HMPREF0549_0276
symbol: tsf
gene_biotype: protein_coding
description:
  Translation elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.


ensembl_gene_id: HMPREF0549_0278
symbol: frr
gene_biotype: protein_coding
description:
  Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.


ensembl_gene_id: HMPREF0549_0279
symbol: uppS
gene_biotype: protein_coding
description:
  Di-trans,poly-cis-decaprenylcistransferase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.


ensembl_gene_id: HMPREF0549_0282
symbol: proS
gene_biotype: protein_coding
description:
  proline--tRNA ligase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacy [...]


ensembl_gene_id: HMPREF0549_0283
symbol: polC
gene_biotype: protein_coding
description:
  DNA polymerase III, alpha subunit, Gram-positive type; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: HMPREF0549_0284
symbol: rimP
gene_biotype: protein_coding
description:
  Hypothetical protein; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.


ensembl_gene_id: HMPREF0549_0285
symbol: nusA
gene_biotype: protein_coding
description:
  Transcription termination factor NusA; Participates in both transcription termination and antitermination.


ensembl_gene_id: HMPREF0549_0288
symbol: infB
gene_biotype: protein_coding
description:
  Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.


ensembl_gene_id: HMPREF0549_0289
symbol: rbfA
gene_biotype: protein_coding
description:
  Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.


ensembl_gene_id: HMPREF0549_0290
symbol: truB
gene_biotype: protein_coding
description:
  tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.


ensembl_gene_id: HMPREF0549_0293
symbol: hrcA
gene_biotype: protein_coding
description:
  Heat-inducible transcription repressor HrcA; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons.


ensembl_gene_id: HMPREF0549_0294
symbol: grpE
gene_biotype: protein_coding
description:
  Co-chaperone GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-depend [...]


ensembl_gene_id: HMPREF0549_0296
symbol: dnaJ
gene_biotype: protein_coding
description:
  Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...]


ensembl_gene_id: HMPREF0549_0298
symbol: lepA
gene_biotype: protein_coding
description:
  GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.


ensembl_gene_id: HMPREF0549_0310
symbol: fni
gene_biotype: protein_coding
description:
  Isopentenyl-diphosphate delta-isomerase, type 2; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).


ensembl_gene_id: HMPREF0549_0326
symbol: prmA
gene_biotype: protein_coding
description:
  Ribosomal protein L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family.


ensembl_gene_id: HMPREF0549_0327
symbol: EEJ41283.1
gene_biotype: protein_coding
description:
  RNA methyltransferase, RsmE family; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.


ensembl_gene_id: HMPREF0549_0329
symbol: relA
gene_biotype: protein_coding
description:
  RelA/SpoT family protein; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.


ensembl_gene_id: HMPREF0549_0330
symbol: dtd
gene_biotype: protein_coding
description:
  D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family.


ensembl_gene_id: HMPREF0549_0333
symbol: aspS
gene_biotype: protein_coding
description:
  aspartate--tRNA ligase; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor end of tRNA(Asp). Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.


ensembl_gene_id: HMPREF0549_0339
symbol: argG
gene_biotype: protein_coding
description:
  Argininosuccinate synthase; COG: COG0137; Belongs to the argininosuccinate synthase family. Type 1 subfamily.


ensembl_gene_id: HMPREF0549_0343
symbol: ybeY
gene_biotype: protein_coding
description:
  Translation metalloprotein YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.


ensembl_gene_id: HMPREF0549_0345
symbol: era
gene_biotype: protein_coding
description:
  Ribosome biogenesis GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.


ensembl_gene_id: HMPREF0549_0349
symbol: dnaG
gene_biotype: protein_coding
description:
  DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.


ensembl_gene_id: HMPREF0549_0350
symbol: rpoD
gene_biotype: protein_coding
description:
  RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.


ensembl_gene_id: HMPREF0549_0354
symbol: pepT
gene_biotype: protein_coding
description:
  Peptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family.


ensembl_gene_id: HMPREF0549_0364
symbol: scpA
gene_biotype: protein_coding
description:
  ScpA/B protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: HMPREF0549_0365
symbol: scpB
gene_biotype: protein_coding
description:
  Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: HMPREF0549_0367
symbol: EEJ41204.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins; Belongs to the prokaryotic riboflavin transporter (P-RFT) (TC 2.A.87) family.


ensembl_gene_id: HMPREF0549_0373
symbol: der
gene_biotype: protein_coding
description:
  Ribosome biogenesis GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.


ensembl_gene_id: HMPREF0549_0374
symbol: hup
gene_biotype: protein_coding
description:
  DNA-binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.


ensembl_gene_id: HMPREF0549_0377
symbol: cca
gene_biotype: protein_coding
description:
  tRNA nucleotidyltransferase/poly(A) polymerase family protein; Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate.


ensembl_gene_id: HMPREF0549_0379
symbol: thyA
gene_biotype: protein_coding
description:
  Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis.


ensembl_gene_id: HMPREF0549_0380
symbol: folA
gene_biotype: protein_coding
description:
  Dihydrofolate reductase; Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis.


ensembl_gene_id: HMPREF0549_0386
symbol: ylqF
gene_biotype: protein_coding
description:
  Ribosome biogenesis GTP-binding protein YlqF; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.


ensembl_gene_id: HMPREF0549_0389
symbol: topA
gene_biotype: protein_coding
description:
  DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]


ensembl_gene_id: HMPREF0549_0391
symbol: plsY
gene_biotype: protein_coding
description:
  Acyl-phosphate glycerol 3-phosphate acyltransferase; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.


ensembl_gene_id: HMPREF0549_0392
symbol: parE
gene_biotype: protein_coding
description:
  DNA topoisomerase IV, B subunit; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 2 subfamily.


ensembl_gene_id: HMPREF0549_0393
symbol: parC
gene_biotype: protein_coding
description:
  DNA topoisomerase IV, A subunit; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase GyrA/ParC subunit family. ParC type 2 subfamily.


ensembl_gene_id: HMPREF0549_0397
symbol: pdxB
gene_biotype: protein_coding
description:
  4-phosphoerythronate dehydrogenase; COG: COG1052; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: HMPREF0549_0398
symbol: msrA
gene_biotype: protein_coding
description:
  Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.


ensembl_gene_id: HMPREF0549_0401
symbol: tpiA
gene_biotype: protein_coding
description:
  Triose-phosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.


ensembl_gene_id: HMPREF0549_0412
symbol: thiE
gene_biotype: protein_coding
description:
  Thiamine-phosphate diphosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.


ensembl_gene_id: HMPREF0549_0414
symbol: thiM
gene_biotype: protein_coding
description:
  Putative hydroxyethylthiazole kinase; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family.


ensembl_gene_id: HMPREF0549_0416
symbol: EEJ41145.1
gene_biotype: protein_coding
description:
  Transcriptional regulator, LysR family; COG: COG0583; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: HMPREF0549_0419
symbol: manA
gene_biotype: protein_coding
description:
  Mannose-6-phosphate isomerase, class I; COG: COG1482; Belongs to the mannose-6-phosphate isomerase type 1 family.


ensembl_gene_id: HMPREF0549_0428
symbol: thrB
gene_biotype: protein_coding
description:
  Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily.


ensembl_gene_id: HMPREF0549_0432
symbol: brnQ
gene_biotype: protein_coding
description:
  Branched-chain amino acid transport system II carrier protein; Component of the transport system for branched-chain amino acids.


ensembl_gene_id: HMPREF0549_0441
symbol: pdxB-2
gene_biotype: protein_coding
description:
  4-phosphoerythronate dehydrogenase; COG: COG0111; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: HMPREF0549_0471
symbol: EEJ41077.1
gene_biotype: protein_coding
description:
  Drug resistance MFS transporter, drug:H+ antiporter-2 family; COG: COG0477; Belongs to the major facilitator superfamily.


ensembl_gene_id: HMPREF0549_0480
symbol: dxs
gene_biotype: protein_coding
description:
  Putative 1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.


ensembl_gene_id: HMPREF0549_0484
symbol: crcB
gene_biotype: protein_coding
description:
  Putative protein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.


ensembl_gene_id: HMPREF0549_0485
symbol: crcB-2
gene_biotype: protein_coding
description:
  CrcB-like protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.


ensembl_gene_id: HMPREF0549_0503
symbol: lspA
gene_biotype: protein_coding
description:
  Signal peptidase II; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.


ensembl_gene_id: HMPREF0549_0507
symbol: asd
gene_biotype: protein_coding
description:
  Aspartate-semialdehyde dehydrogenase; COG: COG0136; Belongs to the aspartate-semialdehyde dehydrogenase family.


ensembl_gene_id: HMPREF0549_0509
symbol: dapB
gene_biotype: protein_coding
description:
  Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.


ensembl_gene_id: HMPREF0549_0510
symbol: dapA
gene_biotype: protein_coding
description:
  Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).


ensembl_gene_id: HMPREF0549_0511
symbol: EEJ41051.1
gene_biotype: protein_coding
description:
  Amidohydrolase; Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate.


ensembl_gene_id: HMPREF0549_0512
symbol: dapD
gene_biotype: protein_coding
description:
  2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase; Catalyzes the transfer of an acetyl group from acetyl-CoA to tetrahydrodipicolinate.


ensembl_gene_id: HMPREF0549_0513
symbol: lysA
gene_biotype: protein_coding
description:
  Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.


ensembl_gene_id: HMPREF0549_0516
symbol: dapF
gene_biotype: protein_coding
description:
  Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.


ensembl_gene_id: HMPREF0549_0520
symbol: gpsB
gene_biotype: protein_coding
description:
  DivIVA domain protein; Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation.


ensembl_gene_id: HMPREF0549_0522
symbol: recU
gene_biotype: protein_coding
description:
  Recombination protein U; Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation; Belongs to the RecU family.


ensembl_gene_id: HMPREF0549_0534
symbol: rfbD
gene_biotype: protein_coding
description:
  dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.


ensembl_gene_id: HMPREF0549_0580
symbol: EEJ40973.1
gene_biotype: protein_coding
description:
  Putative uroporphyrinogen decarboxylase; COG: COG0407; Belongs to the uroporphyrinogen decarboxylase family.


ensembl_gene_id: HMPREF0549_0627
symbol: spxA
gene_biotype: protein_coding
description:
  Regulatory protein spx; Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development- promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress. Belongs to the ArsC family. Spx subfamily.


ensembl_gene_id: HMPREF0549_0644
symbol: pncB
gene_biotype: protein_coding
description:
  Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family.


ensembl_gene_id: HMPREF0549_0645
symbol: nadE
gene_biotype: protein_coding
description:
  NAD+ synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source; Belongs to the NAD synthetase family.


ensembl_gene_id: HMPREF0549_0650
symbol: gpmA1
gene_biotype: protein_coding
description:
  Phosphoglycerate mutase 1 family; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.


ensembl_gene_id: HMPREF0549_0655
symbol: EEJ40852.1
gene_biotype: protein_coding
description:
  ABC transporter, substrate-binding protein, family 3; COG: COG0834; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: HMPREF0549_0658
symbol: EEJ40855.1
gene_biotype: protein_coding
description:
  LysR substrate binding domain protein; COG: COG0583; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: HMPREF0549_0659
symbol: rpiA
gene_biotype: protein_coding
description:
  Ribose 5-phosphate isomerase A; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.


ensembl_gene_id: HMPREF0549_0661
symbol: dut
gene_biotype: protein_coding
description:
  dUTP diphosphatase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA.


ensembl_gene_id: HMPREF0549_0662
symbol: radA
gene_biotype: protein_coding
description:
  DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.


ensembl_gene_id: HMPREF0549_0664
symbol: fhs
gene_biotype: protein_coding
description:
  Formate--tetrahydrofolate ligase; COG: COG2759; Belongs to the formate--tetrahydrofolate ligase family.


ensembl_gene_id: HMPREF0549_0667
symbol: mrnC
gene_biotype: protein_coding
description:
  RNase3 domain protein; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family.


ensembl_gene_id: HMPREF0549_0668
symbol: EEJ40865.1
gene_biotype: protein_coding
description:
  RNA methyltransferase, TrmH family, group 3; COG: COG0566; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: HMPREF0549_0671
symbol: secE
gene_biotype: protein_coding
description:
  Preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.


ensembl_gene_id: HMPREF0549_0672
symbol: nusG
gene_biotype: protein_coding
description:
  Transcription termination/antitermination factor NusG; Participates in transcription elongation, termination and antitermination.


ensembl_gene_id: HMPREF0549_0673
symbol: rplK
gene_biotype: protein_coding
description:
  Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.


ensembl_gene_id: HMPREF0549_0674
symbol: rplA
gene_biotype: protein_coding
description:
  Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.


ensembl_gene_id: HMPREF0549_0677
symbol: hemH
gene_biotype: protein_coding
description:
  Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.


ensembl_gene_id: HMPREF0549_0678
symbol: rplJ
gene_biotype: protein_coding
description:
  Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.


ensembl_gene_id: HMPREF0549_0679
symbol: rplL
gene_biotype: protein_coding
description:
  Ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.


ensembl_gene_id: HMPREF0549_0681
symbol: mscL
gene_biotype: protein_coding
description:
  Large conductance mechanosensitive channel protein; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell.


ensembl_gene_id: HMPREF0549_0688
symbol: menC
gene_biotype: protein_coding
description:
  O-succinylbenzoate synthase; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB).


ensembl_gene_id: HMPREF0549_0689
symbol: adh2
gene_biotype: protein_coding
description:
  Aldehyde dehydrogenase (NAD) family protein; COG: COG1454; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.


ensembl_gene_id: HMPREF0549_0690
symbol: nrdF
gene_biotype: protein_coding
description:
  Ribonucleoside-diphosphate reductase, beta subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family.


ensembl_gene_id: HMPREF0549_0691
symbol: EEJ40888.1
gene_biotype: protein_coding
description:
  Ribonucleoside-diphosphate reductase, alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.


ensembl_gene_id: HMPREF0549_0693
symbol: tadA
gene_biotype: protein_coding
description:
  Cytidine and deoxycytidylate deaminase zinc-binding region; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: HMPREF0549_0694
symbol: dnaX
gene_biotype: protein_coding
description:
  DNA polymerase III, subunit gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: HMPREF0549_0695
symbol: EEJ40892.1
gene_biotype: protein_coding
description:
  DNA-binding protein, YbaB/EbfC family; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.


ensembl_gene_id: HMPREF0549_0696
symbol: recR
gene_biotype: protein_coding
description:
  Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.


ensembl_gene_id: HMPREF0549_0698
symbol: tmk
gene_biotype: protein_coding
description:
  dTMP kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.


ensembl_gene_id: HMPREF0549_0701
symbol: EEJ40898.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in initiation control of chromosome replication. Belongs to the YabA family.


ensembl_gene_id: HMPREF0549_0702
symbol: rsmI
gene_biotype: protein_coding
description:
  S-adenosylmethionine-dependent methyltransferase, YraL family; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.


ensembl_gene_id: HMPREF0549_0705
symbol: ppk1
gene_biotype: protein_coding
description:
  Polyphosphate kinase 1; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.


ensembl_gene_id: HMPREF0549_0707
symbol: galE
gene_biotype: protein_coding
description:
  UDP-glucose 4-epimerase; COG: COG1087; Belongs to the NAD(P)-dependent epimerase/dehydratase family.


ensembl_gene_id: HMPREF0549_0710
symbol: gcp
gene_biotype: protein_coding
description:
  Putative glycoprotease GCP; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.


ensembl_gene_id: HMPREF0549_0711
symbol: proA
gene_biotype: protein_coding
description:
  Glutamate-5-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.


ensembl_gene_id: HMPREF0549_0712
symbol: proB
gene_biotype: protein_coding
description:
  Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.


ensembl_gene_id: HMPREF0549_0714
symbol: rex
gene_biotype: protein_coding
description:
  CoA binding domain protein; Modulates transcription in response to changes in cellular NADH/NAD(+) redox state.


ensembl_gene_id: HMPREF0549_0715
symbol: groS
gene_biotype: protein_coding
description:
  Chaperonin GroS; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.


ensembl_gene_id: HMPREF0549_0716
symbol: groL
gene_biotype: protein_coding
description:
  Chaperonin GroL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.


ensembl_gene_id: HMPREF0549_0725
symbol: raiA
gene_biotype: protein_coding
description:
  Ribosomal subunit interface protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.


ensembl_gene_id: HMPREF0549_0726
symbol: secA
gene_biotype: protein_coding
description:
  Preprotein translocase, SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane.


ensembl_gene_id: HMPREF0549_0728
symbol: prfB
gene_biotype: protein_coding
description:
  Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.


ensembl_gene_id: HMPREF0549_0731
symbol: hprK
gene_biotype: protein_coding
description:
  HPr(Ser) kinase/phosphatase; Catalyzes the ATP- as well as the pyrophosphate-dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK/P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P-Ser-HPr). The two antagonistic activities of HprK/P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable car [...]


ensembl_gene_id: HMPREF0549_0732
symbol: lgt
gene_biotype: protein_coding
description:
  Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.


ensembl_gene_id: HMPREF0549_0733
symbol: gpsA
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate dehydrogenase [NAD(P)+]; COG: COG0240; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: HMPREF0549_0740
symbol: uvrB
gene_biotype: protein_coding
description:
  Excinuclease ABC, B subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...]


ensembl_gene_id: HMPREF0549_0741
symbol: uvrA
gene_biotype: protein_coding
description:
  Excinuclease ABC, A subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.


ensembl_gene_id: HMPREF0549_0743
symbol: EEJ40814.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family.


ensembl_gene_id: HMPREF0549_0745
symbol: clpP
gene_biotype: protein_coding
description:
  ATP-dependent Clp endopeptidase, proteolytic subunit ClpP; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: HMPREF0549_0747
symbol: gap
gene_biotype: protein_coding
description:
  Glyceraldehyde-3-phosphate dehydrogenase, type I; COG: COG0057; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: HMPREF0549_0750
symbol: eno
gene_biotype: protein_coding
description:
  Phosphopyruvate hydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.


ensembl_gene_id: HMPREF0549_0753
symbol: secG
gene_biotype: protein_coding
description:
  Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.


ensembl_gene_id: HMPREF0549_0755
symbol: rnr
gene_biotype: protein_coding
description:
  Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.


ensembl_gene_id: HMPREF0549_0756
symbol: smpB
gene_biotype: protein_coding
description:
  SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...]


ensembl_gene_id: HMPREF0549_0758
symbol: ung
gene_biotype: protein_coding
description:
  uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.


ensembl_gene_id: HMPREF0549_0766
symbol: dacA
gene_biotype: protein_coding
description:
  TIGR00159 family protein; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria.


ensembl_gene_id: HMPREF0549_0768
symbol: glmM
gene_biotype: protein_coding
description:
  Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.


ensembl_gene_id: HMPREF0549_0769
symbol: glmS
gene_biotype: protein_coding
description:
  Glutamine-fructose-6-phosphate transaminase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.


ensembl_gene_id: HMPREF0549_0783
symbol: argF
gene_biotype: protein_coding
description:
  Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.


ensembl_gene_id: HMPREF0549_0802
symbol: prfA
gene_biotype: protein_coding
description:
  Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.


ensembl_gene_id: HMPREF0549_0803
symbol: prmC
gene_biotype: protein_coding
description:
  protein-(glutamine-N5) methyltransferase, release factor-specific; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.


ensembl_gene_id: HMPREF0549_0804
symbol: EEJ40706.1
gene_biotype: protein_coding
description:
  Sua5/YciO/YrdC/YwlC family protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.


ensembl_gene_id: HMPREF0549_0805
symbol: upp
gene_biotype: protein_coding
description:
  Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.


ensembl_gene_id: HMPREF0549_0806
symbol: ptsP
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate-protein phosphotransferase; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr).


ensembl_gene_id: HMPREF0549_0810
symbol: atpB
gene_biotype: protein_coding
description:
  ATP synthase F0, A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.


ensembl_gene_id: HMPREF0549_0811
symbol: atpE
gene_biotype: protein_coding
description:
  ATP synthase F0, C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: HMPREF0549_0812
symbol: atpF
gene_biotype: protein_coding
description:
  ATP synthase F0, B subunit; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.


ensembl_gene_id: HMPREF0549_0813
symbol: atpH
gene_biotype: protein_coding
description:
  ATP synthase F1, delta subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: HMPREF0549_0814
symbol: atpA
gene_biotype: protein_coding
description:
  ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.


ensembl_gene_id: HMPREF0549_0815
symbol: atpG
gene_biotype: protein_coding
description:
  ATP synthase F1, gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.


ensembl_gene_id: HMPREF0549_0816
symbol: atpD
gene_biotype: protein_coding
description:
  ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.


ensembl_gene_id: HMPREF0549_0817
symbol: atpC
gene_biotype: protein_coding
description:
  ATP synthase F1, epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.


ensembl_gene_id: HMPREF0549_0825
symbol: metN
gene_biotype: protein_coding
description:
  ABC transporter, ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.


ensembl_gene_id: HMPREF0549_0829
symbol: ddl
gene_biotype: protein_coding
description:
  D-ala D-ala ligase N-terminal domain protein; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.


ensembl_gene_id: HMPREF0549_0841
symbol: rpsD
gene_biotype: protein_coding
description:
  Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.


ensembl_gene_id: HMPREF0549_0843
symbol: ezrA
gene_biotype: protein_coding
description:
  Septation ring formation regulator EzrA; Negative regulator of FtsZ ring formation; modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization; Belongs to the EzrA family.


ensembl_gene_id: HMPREF0549_0846
symbol: thiI
gene_biotype: protein_coding
description:
  Thiamine biosynthesis/tRNA modification protein ThiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS.


ensembl_gene_id: HMPREF0549_0847
symbol: valS
gene_biotype: protein_coding
description:
  valine--tRNA ligase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.


ensembl_gene_id: HMPREF0549_0864
symbol: pgsA
gene_biotype: protein_coding
description:
  CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; COG: COG0558; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: HMPREF0549_0867
symbol: recA
gene_biotype: protein_coding
description:
  RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.


ensembl_gene_id: HMPREF0549_0868
symbol: ytgF
gene_biotype: protein_coding
description:
  YmdA/YtgF family protein; Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family.


ensembl_gene_id: HMPREF0549_0869
symbol: mutS
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.


ensembl_gene_id: HMPREF0549_0870
symbol: EEJ40772.1
gene_biotype: protein_coding
description:
  ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; COG: COG0323; Belongs to the DNA mismatch repair MutL/HexB family.


ensembl_gene_id: HMPREF0549_0872
symbol: ruvA
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.


ensembl_gene_id: HMPREF0549_0873
symbol: ruvB
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.


ensembl_gene_id: HMPREF0549_0878
symbol: cshB
gene_biotype: protein_coding
description:
  DEAD/DEAH box helicase; Probable DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures.


ensembl_gene_id: HMPREF0549_0879
symbol: alaS
gene_biotype: protein_coding
description:
  alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.


ensembl_gene_id: HMPREF0549_0881
symbol: EEJ40659.1
gene_biotype: protein_coding
description:
  RNAse H domain protein, YqgF family; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.


ensembl_gene_id: HMPREF0549_0884
symbol: mutS2
gene_biotype: protein_coding
description:
  MutS2 family protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.


ensembl_gene_id: HMPREF0549_0888
symbol: rdgB
gene_biotype: protein_coding
description:
  Non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.


ensembl_gene_id: HMPREF0549_0905
symbol: ackA
gene_biotype: protein_coding
description:
  Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.


ensembl_gene_id: HMPREF0549_0908
symbol: EEJ40646.1
gene_biotype: protein_coding
description:
  HAD hydrolase, TIGR01457 family; Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro; Belongs to the HAD-like hydrolase superfamily. NagD family.


ensembl_gene_id: HMPREF0549_0912
symbol: tyrS
gene_biotype: protein_coding
description:
  tyrosine--tRNA ligase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily.


ensembl_gene_id: HMPREF0549_0918
symbol: purN
gene_biotype: protein_coding
description:
  Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.


ensembl_gene_id: HMPREF0549_0920
symbol: purF
gene_biotype: protein_coding
description:
  Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.


ensembl_gene_id: HMPREF0549_0921
symbol: purL
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase II; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to assist  [...]


ensembl_gene_id: HMPREF0549_0922
symbol: purQ
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase I; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to assist i [...]


ensembl_gene_id: HMPREF0549_0923
symbol: purS
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase, purS protein; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought [...]


ensembl_gene_id: HMPREF0549_0924
symbol: purC
gene_biotype: protein_coding
description:
  Phosphoribosylaminoimidazolesuccinocarboxamide synthase; COG: COG0152; Belongs to the SAICAR synthetase family.


ensembl_gene_id: HMPREF0549_0925
symbol: metA
gene_biotype: protein_coding
description:
  Putative homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family.


ensembl_gene_id: HMPREF0549_0931
symbol: purK
gene_biotype: protein_coding
description:
  Phosphoribosylaminoimidazole carboxylase, ATPase subunit; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR).


ensembl_gene_id: HMPREF0549_0932
symbol: purE
gene_biotype: protein_coding
description:
  Phosphoribosylaminoimidazole carboxylase, catalytic subunit; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).


ensembl_gene_id: HMPREF0549_0935
symbol: pyrE
gene_biotype: protein_coding
description:
  Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).


ensembl_gene_id: HMPREF0549_0941
symbol: EEJ40537.1
gene_biotype: protein_coding
description:
  Putative inosine-5'-monophosphate dehydrogenase; Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides.


ensembl_gene_id: HMPREF0549_0942
symbol: deoB
gene_biotype: protein_coding
description:
  Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family.


ensembl_gene_id: HMPREF0549_0946
symbol: ychF
gene_biotype: protein_coding
description:
  GTP-binding protein YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.


ensembl_gene_id: HMPREF0549_0951
symbol: gidB
gene_biotype: protein_coding
description:
  16S rRNA methyltransferase GidB; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.


ensembl_gene_id: HMPREF0549_0964
symbol: serS
gene_biotype: protein_coding
description:
  serine--tRNA ligase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).


ensembl_gene_id: HMPREF0549_0970
symbol: EEJ40566.1
gene_biotype: protein_coding
description:
  ApbE family protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.


ensembl_gene_id: HMPREF0549_0973
symbol: rumA
gene_biotype: protein_coding
description:
  23S rRNA (uracil-5-)-methyltransferase RumA; COG: COG2265; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.


ensembl_gene_id: HMPREF0549_0977
symbol: pyrF
gene_biotype: protein_coding
description:
  Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily.


ensembl_gene_id: HMPREF0549_0978
symbol: pyrR1
gene_biotype: protein_coding
description:
  Phosphoribosyl transferase domain protein; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant; Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrR subfamily.


ensembl_gene_id: HMPREF0549_0980
symbol: purA
gene_biotype: protein_coding
description:
  Adenylosuccinate synthase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.


ensembl_gene_id: HMPREF0549_0981
symbol: guaC
gene_biotype: protein_coding
description:
  GMP reductase; Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides; Belongs to the IMPDH/GMPR family. GuaC type 2 subfamily.


ensembl_gene_id: HMPREF0549_1002
symbol: EEJ40598.1
gene_biotype: protein_coding
description:
  Phospholipase D domain protein; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol.


ensembl_gene_id: HMPREF0549_1005
symbol: EEJ40601.1
gene_biotype: protein_coding
description:
  Toxin-antitoxin system, toxin component, MazF family; Toxic component of a type II toxin-antitoxin (TA) system.


ensembl_gene_id: HMPREF0549_1006
symbol: EEJ40602.1
gene_biotype: protein_coding
description:
  ATPase family associated with various cellular activities (AAA); COG: COG0542; Belongs to the ClpA/ClpB family.


ensembl_gene_id: HMPREF0549_1017
symbol: rlmH
gene_biotype: protein_coding
description:
  rRNA large subunit m3Psi methyltransferase RlmH; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.


ensembl_gene_id: HMPREF0549_1030
symbol: dnaB
gene_biotype: protein_coding
description:
  Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.


ensembl_gene_id: HMPREF0549_1032
symbol: EEJ40513.1
gene_biotype: protein_coding
description:
  DHHA1 domain protein; Has phosphodiesterase (PDE) activity against cyclic-di-AMP (c-di-AMP); Belongs to the GdpP/PdeA phosphodiesterase family.


ensembl_gene_id: HMPREF0549_1033
symbol: rpsR
gene_biotype: protein_coding
description:
  Ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.


ensembl_gene_id: HMPREF0549_1034
symbol: EEJ40515.1
gene_biotype: protein_coding
description:
  Single-strand binding family protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.


ensembl_gene_id: HMPREF0549_1036
symbol: gyrA
gene_biotype: protein_coding
description:
  DNA gyrase, A subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: HMPREF0549_1037
symbol: gyrB
gene_biotype: protein_coding
description:
  DNA gyrase, B subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: HMPREF0549_1038
symbol: recF
gene_biotype: protein_coding
description:
  DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family.


ensembl_gene_id: HMPREF0549_1040
symbol: dnaN
gene_biotype: protein_coding
description:
  DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]


ensembl_gene_id: HMPREF0549_1041
symbol: dnaA
gene_biotype: protein_coding
description:
  Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.


ensembl_gene_id: HMPREF0549_1043
symbol: rnpA
gene_biotype: protein_coding
description:
  Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.


ensembl_gene_id: HMPREF0549_1044
symbol: yidC
gene_biotype: protein_coding
description:
  Membrane protein insertase, YidC/Oxa1 family; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins; Belongs to the OXA1/ALB3/YidC family. Type 2 subfamily.


ensembl_gene_id: HMPREF0549_1045
symbol: fabZ
gene_biotype: protein_coding
description:
  Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.


ensembl_gene_id: HMPREF0549_1047
symbol: fabHA
gene_biotype: protein_coding
description:
  Beta-ketoacyl-acyl-carrier-protein synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.


ensembl_gene_id: HMPREF0549_1051
symbol: fabF
gene_biotype: protein_coding
description:
  Beta-ketoacyl-acyl-carrier-protein synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.


ensembl_gene_id: HMPREF0549_1052
symbol: EEJ40508.1
gene_biotype: protein_coding
description:
  Putative acetyl-CoA carboxylase, biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: HMPREF0549_1054
symbol: accC
gene_biotype: protein_coding
description:
  Putative acetyl-CoA carboxylase, biotin carboxylase subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: HMPREF0549_1055
symbol: accD
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase, carboxyl transferase, beta subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.


ensembl_gene_id: HMPREF0549_1061
symbol: trmE
gene_biotype: protein_coding
description:
  tRNA modification GTPase TrmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.


ensembl_gene_id: HMPREF0549_1062
symbol: gidA
gene_biotype: protein_coding
description:
  tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.


ensembl_gene_id: HMPREF0549_1065
symbol: murE
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan.


ensembl_gene_id: HMPREF0549_1069
symbol: EEJ40485.1
gene_biotype: protein_coding
description:
  Redoxin family protein; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.


ensembl_gene_id: HMPREF0549_1072
symbol: EEJ40488.1
gene_biotype: protein_coding
description:
  Cation diffusion facilitator family transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.


ensembl_gene_id: HMPREF0549_1076
symbol: rbsK
gene_biotype: protein_coding
description:
  Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.


ensembl_gene_id: HMPREF0549_1089
symbol: EEJ40455.1
gene_biotype: protein_coding
description:
  acetyl-CoA C-acetyltransferase; COG: COG0183; Belongs to the thiolase-like superfamily. Thiolase family.


ensembl_gene_id: HMPREF0549_1105
symbol: EEJ40402.1
gene_biotype: protein_coding
description:
  2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.


ensembl_gene_id: HMPREF0549_1110
symbol: pstC
gene_biotype: protein_coding
description:
  Phosphate ABC transporter, permease protein PstC; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: HMPREF0549_1112
symbol: pstB
gene_biotype: protein_coding
description:
  Phosphate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.


ensembl_gene_id: HMPREF0549_1113
symbol: phoU
gene_biotype: protein_coding
description:
  Phosphate transport system regulatory protein PhoU; Plays a role in the regulation of phosphate uptake.


ensembl_gene_id: HMPREF0549_1136
symbol: ldhA
gene_biotype: protein_coding
description:
  D-lactate dehydrogenase; COG: COG1052; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: HMPREF0549_1137
symbol: nnrE
gene_biotype: protein_coding
description:
  YjeF-like protein; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family.


ensembl_gene_id: HMPREF0549_1156
symbol: greA
gene_biotype: protein_coding
description:
  Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.


ensembl_gene_id: HMPREF0549_1163
symbol: galK
gene_biotype: protein_coding
description:
  Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.


ensembl_gene_id: HMPREF0549_1171
symbol: EEJ40384.1
gene_biotype: protein_coding
description:
  Transporter, dicarboxylate/amino acid:cation Na+/H+ symporter family protein; COG: COG1301; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: HMPREF0549_1176
symbol: gnd-2
gene_biotype: protein_coding
description:
  Phosphogluconate dehydrogenase (decarboxylating); Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.


ensembl_gene_id: HMPREF0549_1177
symbol: zwf
gene_biotype: protein_coding
description:
  Glucose-6-phosphate dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.


ensembl_gene_id: HMPREF0549_1234
symbol: metE
gene_biotype: protein_coding
description:
  5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family.


ensembl_gene_id: HMPREF0549_1235
symbol: metF
gene_biotype: protein_coding
description:
  Putative methylenetetrahydrofolate reductase (NAD(P)H); COG: COG0685; Belongs to the methylenetetrahydrofolate reductase family.


ensembl_gene_id: HMPREF0549_1249
symbol: EEJ40282.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid ABC transporter, permease protein; COG: COG4120; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: HMPREF0549_1258
symbol: pip
gene_biotype: protein_coding
description:
  Proline-specific peptidase; Releases the N-terminal proline from various substrates. Belongs to the peptidase S33 family.


ensembl_gene_id: HMPREF0549_1259
symbol: pepX
gene_biotype: protein_coding
description:
  X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain protein; Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline.


ensembl_gene_id: HMPREF0549_1261
symbol: potA
gene_biotype: protein_coding
description:
  Polyamine ABC transporter, ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.


ensembl_gene_id: HMPREF0549_1280
symbol: hflX
gene_biotype: protein_coding
description:
  GTP-binding protein HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.


ensembl_gene_id: HMPREF0549_1298
symbol: glyA
gene_biotype: protein_coding
description:
  Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.


ensembl_gene_id: HMPREF0549_1303
symbol: efp
gene_biotype: protein_coding
description:
  Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.


ensembl_gene_id: HMPREF0549_1330
symbol: ppi
gene_biotype: protein_coding
description:
  Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.


ensembl_gene_id: HMPREF0549_1331
symbol: fumC
gene_biotype: protein_coding
description:
  Fumarate hydratase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.


ensembl_gene_id: HMPREF0549_1344
symbol: mprF
gene_biotype: protein_coding
description:
  Gram-positive signal peptide protein, YSIRK family; Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms.


ensembl_gene_id: HMPREF0549_1373
symbol: rpoB
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: HMPREF0549_1374
symbol: rpoC
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: HMPREF0549_1377
symbol: rpsL
gene_biotype: protein_coding
description:
  Ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.


ensembl_gene_id: HMPREF0549_1378
symbol: rpsG
gene_biotype: protein_coding
description:
  Ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.


ensembl_gene_id: HMPREF0549_1379
symbol: fusA
gene_biotype: protein_coding
description:
  Translation elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 s [...]


ensembl_gene_id: HMPREF0549_1380
symbol: guaD
gene_biotype: protein_coding
description:
  Guanine deaminase; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia; Belongs to the metallo-dependent hydrolases superfamily. ATZ/TRZ family.


ensembl_gene_id: HMPREF0549_1383
symbol: rpsJ
gene_biotype: protein_coding
description:
  Ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.


ensembl_gene_id: HMPREF0549_1384
symbol: rplC
gene_biotype: protein_coding
description:
  50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.


ensembl_gene_id: HMPREF0549_1386
symbol: rplW
gene_biotype: protein_coding
description:
  Ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.


ensembl_gene_id: HMPREF0549_1387
symbol: rplB
gene_biotype: protein_coding
description:
  Ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.


ensembl_gene_id: HMPREF0549_1388
symbol: rpsS
gene_biotype: protein_coding
description:
  Ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.


ensembl_gene_id: HMPREF0549_1389
symbol: rplV
gene_biotype: protein_coding
description:
  Ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.


ensembl_gene_id: HMPREF0549_1390
symbol: rpsC
gene_biotype: protein_coding
description:
  Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.


ensembl_gene_id: HMPREF0549_1391
symbol: rplP
gene_biotype: protein_coding
description:
  Ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.


ensembl_gene_id: HMPREF0549_1393
symbol: rpsQ
gene_biotype: protein_coding
description:
  30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.


ensembl_gene_id: HMPREF0549_1394
symbol: rplN
gene_biotype: protein_coding
description:
  Ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.


ensembl_gene_id: HMPREF0549_1395
symbol: rplX
gene_biotype: protein_coding
description:
  Ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.


ensembl_gene_id: HMPREF0549_1396
symbol: rplE
gene_biotype: protein_coding
description:
  Ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.


ensembl_gene_id: HMPREF0549_1397
symbol: rpsN
gene_biotype: protein_coding
description:
  Ribosomal protein S14p/S29e; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.


ensembl_gene_id: HMPREF0549_1398
symbol: rpsH
gene_biotype: protein_coding
description:
  Ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.


ensembl_gene_id: HMPREF0549_1399
symbol: rplF
gene_biotype: protein_coding
description:
  Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.


ensembl_gene_id: HMPREF0549_1400
symbol: rplR
gene_biotype: protein_coding
description:
  Ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.


ensembl_gene_id: HMPREF0549_1401
symbol: rpsE
gene_biotype: protein_coding
description:
  Ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.


ensembl_gene_id: HMPREF0549_1403
symbol: rplO
gene_biotype: protein_coding
description:
  Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.


ensembl_gene_id: HMPREF0549_1404
symbol: secY
gene_biotype: protein_coding
description:
  Preprotein translocase, SecY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.


ensembl_gene_id: HMPREF0549_1405
symbol: adk
gene_biotype: protein_coding
description:
  Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.


ensembl_gene_id: HMPREF0549_1406
symbol: infA
gene_biotype: protein_coding
description:
  Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.


ensembl_gene_id: HMPREF0549_1408
symbol: rpsM
gene_biotype: protein_coding
description:
  30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.


ensembl_gene_id: HMPREF0549_1409
symbol: rpsK
gene_biotype: protein_coding
description:
  30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.


ensembl_gene_id: HMPREF0549_1410
symbol: rpoA
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: HMPREF0549_1412
symbol: ecfA
gene_biotype: protein_coding
description:
  ABC transporter, ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.


ensembl_gene_id: HMPREF0549_1415
symbol: truA
gene_biotype: protein_coding
description:
  tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.


ensembl_gene_id: HMPREF0549_1416
symbol: rplM
gene_biotype: protein_coding
description:
  Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.


ensembl_gene_id: HMPREF0549_1424
symbol: ligA
gene_biotype: protein_coding
description:
  DNA ligase (NAD+); DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA; Belongs to the NAD-dependent DNA ligase family. LigA subfamily.


ensembl_gene_id: HMPREF0549_1426
symbol: gatC
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.


ensembl_gene_id: HMPREF0549_1427
symbol: gatA
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).


ensembl_gene_id: HMPREF0549_1428
symbol: gatB
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily.


ensembl_gene_id: HMPREF0549_1474
symbol: EEJ40063.1
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 2-epimerase; COG: COG0381; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.


ensembl_gene_id: HMPREF0549_1478
symbol: map
gene_biotype: protein_coding
description:
  Methionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.


ensembl_gene_id: HMPREF0549_1515
symbol: prfC
gene_biotype: protein_coding
description:
  Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.


ensembl_gene_id: HMPREF0549_1537
symbol: proC
gene_biotype: protein_coding
description:
  Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.


ensembl_gene_id: HMPREF0549_1545
symbol: mprF-2
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms.


ensembl_gene_id: HMPREF0549_1558
symbol: purB
gene_biotype: protein_coding
description:
  Adenylosuccinate lyase; COG: COG0015; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.


ensembl_gene_id: HMPREF0549_1574
symbol: menE
gene_biotype: protein_coding
description:
  O-succinylbenzoate-CoA ligase; Converts 2-succinylbenzoate (OSB) to 2-succinylbenzoyl-CoA (OSB-CoA); Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily.


ensembl_gene_id: HMPREF0549_1575
symbol: menB
gene_biotype: protein_coding
description:
  Naphthoate synthase; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA).


ensembl_gene_id: HMPREF0549_1584
symbol: nrdG
gene_biotype: protein_coding
description:
  Anaerobic ribonucleoside-triphosphate reductase activating protein; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine.


ensembl_gene_id: HMPREF0549_1592
symbol: sufS
gene_biotype: protein_coding
description:
  Cysteine desulfurase, SufS subfamily; COG: COG0520; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: HMPREF0549_1597
symbol: EEJ39941.1
gene_biotype: protein_coding
description:
  Hsp20/alpha crystallin family protein; COG: COG0071; Belongs to the small heat shock protein (HSP20) family.


ensembl_gene_id: HMPREF0549_1605
symbol: metK
gene_biotype: protein_coding
description:
  Methionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.


ensembl_gene_id: HMPREF0549_1609
symbol: nnrD
gene_biotype: protein_coding
description:
  YjeF domain protein; Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S-and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration.


ensembl_gene_id: HMPREF0549_1632
symbol: prsA
gene_biotype: protein_coding
description:
  PPIC-type PPIASE domain protein; Plays a major role in protein secretion by helping the post- translocational extracellular folding of several secreted proteins.


ensembl_gene_id: HMPREF0549_1637
symbol: trmB
gene_biotype: protein_coding
description:
  tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.


ensembl_gene_id: HMPREF0549_1641
symbol: EEJ39858.1
gene_biotype: protein_coding
description:
  tRNA binding domain protein; COG: COG0073; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.


ensembl_gene_id: HMPREF0549_1645
symbol: polA
gene_biotype: protein_coding
description:
  DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.


ensembl_gene_id: HMPREF0549_1646
symbol: mutM
gene_biotype: protein_coding
description:
  DNA-formamidopyrimidine glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates.


ensembl_gene_id: HMPREF0549_1647
symbol: coaE
gene_biotype: protein_coding
description:
  dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.


ensembl_gene_id: HMPREF0549_1648
symbol: nrdR
gene_biotype: protein_coding
description:
  Putative transcriptional regulator NrdR; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes.


ensembl_gene_id: HMPREF0549_1651
symbol: infC
gene_biotype: protein_coding
description:
  Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.


ensembl_gene_id: HMPREF0549_1653
symbol: rplT
gene_biotype: protein_coding
description:
  Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.


ensembl_gene_id: HMPREF0549_1657
symbol: nadD-2
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).


ensembl_gene_id: HMPREF0549_1659
symbol: rsfS
gene_biotype: protein_coding
description:
  Iojap-like protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.


ensembl_gene_id: HMPREF0549_1661
symbol: tmcAL
gene_biotype: protein_coding
description:
  Cytidyltransferase-related domain protein; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of elongator tRNA(Met), using acetate and ATP as substrates. First activates an acetate ion to form acetyladenylate (Ac- AMP) and then transfers the acetyl group to tRNA to form ac(4)C34.


ensembl_gene_id: HMPREF0549_1668
symbol: def-2
gene_biotype: protein_coding
description:
  Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins; Belongs to the polypeptide deformylase family.


ensembl_gene_id: HMPREF0549_1671
symbol: EEJ39888.1
gene_biotype: protein_coding
description:
  RNA methyltransferase, TrmH family; COG: COG0566; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: HMPREF0549_1674
symbol: pheS
gene_biotype: protein_coding
description:
  phenylalanine--tRNA ligase, alpha subunit; COG: COG0016; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.


ensembl_gene_id: HMPREF0549_1675
symbol: pheT
gene_biotype: protein_coding
description:
  phenylalanine--tRNA ligase, beta subunit; COG: COG0072; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.


ensembl_gene_id: HMPREF0549_1677
symbol: greA-2
gene_biotype: protein_coding
description:
  Prokaryotic transcription elongation factor, GreA/GreB domain protein; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.


ensembl_gene_id: HMPREF0549_1682
symbol: mthFS
gene_biotype: protein_coding
description:
  5-formyltetrahydrofolate cyclo-ligase; COG: COG0212; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.


ensembl_gene_id: HMPREF0549_1688
symbol: miaA
gene_biotype: protein_coding
description:
  tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.


ensembl_gene_id: HMPREF0549_1690
symbol: gltX
gene_biotype: protein_coding
description:
  glutamate--tRNA ligase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.


ensembl_gene_id: HMPREF0549_1699
symbol: rplU
gene_biotype: protein_coding
description:
  Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.


ensembl_gene_id: HMPREF0549_1705
symbol: nusB
gene_biotype: protein_coding
description:
  Transcription antitermination factor NusB; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.


ensembl_gene_id: HMPREF0549_1706
symbol: folD
gene_biotype: protein_coding
description:
  Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain protein; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.


ensembl_gene_id: HMPREF0549_1707
symbol: xseA
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII, large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.


ensembl_gene_id: HMPREF0549_1708
symbol: xseB
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII, small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.


ensembl_gene_id: HMPREF0549_1715
symbol: rpoZ
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.


ensembl_gene_id: HMPREF0549_1716
symbol: coaBC
gene_biotype: protein_coding
description:
  Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.


ensembl_gene_id: HMPREF0549_1717
symbol: priA
gene_biotype: protein_coding
description:
  Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.


ensembl_gene_id: HMPREF0549_1718
symbol: fmt
gene_biotype: protein_coding
description:
  methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.


ensembl_gene_id: HMPREF0549_1719
symbol: sun
gene_biotype: protein_coding
description:
  Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.


ensembl_gene_id: HMPREF0549_1722
symbol: rsgA
gene_biotype: protein_coding
description:
  Ribosome small subunit-dependent GTPase A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.


ensembl_gene_id: HMPREF0549_1728
symbol: recG
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.


ensembl_gene_id: HMPREF0549_1729
symbol: plsX
gene_biotype: protein_coding
description:
  Fatty acid/phospholipid synthesis protein PlsX; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.


ensembl_gene_id: HMPREF0549_1731
symbol: rnc
gene_biotype: protein_coding
description:
  Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.


ensembl_gene_id: HMPREF0549_1732
symbol: smc
gene_biotype: protein_coding
description:
  Chromosome segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family.


ensembl_gene_id: HMPREF0549_1733
symbol: ftsY
gene_biotype: protein_coding
description:
  Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC).


ensembl_gene_id: HMPREF0549_1734
symbol: EEJ39852.1
gene_biotype: protein_coding
description:
  Helix-turn-helix protein, YlxM/p13 family; Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a regulatory protein.


ensembl_gene_id: HMPREF0549_1735
symbol: ffh
gene_biotype: protein_coding
description:
  Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily.


ensembl_gene_id: HMPREF0549_1742
symbol: rimM
gene_biotype: protein_coding
description:
  16S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.


ensembl_gene_id: HMPREF0549_1743
symbol: trmD
gene_biotype: protein_coding
description:
  tRNA (guanine-N(1)-)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.


ensembl_gene_id: HMPREF0549_1745
symbol: rplS
gene_biotype: protein_coding
description:
  Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.


ensembl_gene_id: HMPREF0549_1817
symbol: pyrB
gene_biotype: protein_coding
description:
  Aspartate carbamoyltransferase; COG: COG0540; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.


ensembl_gene_id: HMPREF0549_1818
symbol: pyrC
gene_biotype: protein_coding
description:
  Amidohydrolase family protein; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.


ensembl_gene_id: HMPREF0549_1824
symbol: ubiE
gene_biotype: protein_coding
description:
  Ubiquinone/menaquinone biosynthesis methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2).


ensembl_gene_id: HMPREF0549_1828
symbol: rpsN-2
gene_biotype: protein_coding
description:
  Ribosomal protein S14p/S29e; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.


ensembl_gene_id: HMPREF0549_1829
symbol: ahpC
gene_biotype: protein_coding
description:
  Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.


ensembl_gene_id: HMPREF0549_1835
symbol: secA2
gene_biotype: protein_coding
description:
  Accessory Sec system translocase SecA2; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane.


ensembl_gene_id: HMPREF0549_1836
symbol: gtfA-2
gene_biotype: protein_coding
description:
  Accessory Sec system glycosylation protein GtfA; Required for polymorphic O-glycosylation of the serine-rich repeat protein in this bacteria. Catalyzes the first step in glycosylation by transferring N-acetylglucosamine from UDP-GlcNAc to serine residues in the substrate protein. Part of the accessory SecA2/SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon.


ensembl_gene_id: HMPREF0549_1837
symbol: gtfB
gene_biotype: protein_coding
description:
  Accessory Sec system glycosyltransferase GtfB; Required for polymorphic O-glycosylation of the serine-rich repeat protein in this bacteria. A stabilizing protein that is part of the accessory SecA2/SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon. The GtfA-GtfB complex adds GlcNAc from UDP-GlcNAc to the substrate protein, attaching the first sugar residue. Stabilizes the glycosylation activity of GtfA. Has no N-acetylglucosaminyl transferase activity on its own.


ensembl_gene_id: HMPREF0549_1846
symbol: dmpI
gene_biotype: protein_coding
description:
  4-oxalocrotonate tautomerase family enzyme; COG: COG1942; Belongs to the 4-oxalocrotonate tautomerase family.


ensembl_gene_id: HMPREF0549_1847
symbol: glpK
gene_biotype: protein_coding
description:
  Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.


ensembl_gene_id: HMPREF0549_1869
symbol: xpt
gene_biotype: protein_coding
description:
  Xanthine phosphoribosyltransferase; Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis.


# pathwayInfo

id: CL:1010
description: Mixed, incl. Chromosome segregation, and ParB/Spo0J, HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1010_Mixed,_incl._Chromosome_segregation,_and_ParB/Spo0J,_HTH_domain


id: CL:1012
description: Mixed, incl. Chromosome segregation, and rRNA pseudouridine synthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1012_Mixed,_incl._Chromosome_segregation,_and_rRNA_pseudouridine_synthesis


id: CL:1013
description: Mixed, incl. rRNA pseudouridine synthesis, and ECF transporter, substrate-specific component
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1013_Mixed,_incl._rRNA_pseudouridine_synthesis,_and_ECF_transporter,_substrate-specific_component


id: CL:1026
description: Mixed, incl. Chromosome partition, and Integrase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1026_Mixed,_incl._Chromosome_partition,_and_Integrase_activity


id: CL:1040
description: Mixed, incl. ParB/Spo0J, HTH domain, and TGS-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1040_Mixed,_incl._ParB/Spo0J,_HTH_domain,_and_TGS-like


id: CL:1054
description: Mixed, incl. Sulfur relay system, and GAF domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1054_Mixed,_incl._Sulfur_relay_system,_and_GAF_domain


id: CL:1055
description: Mixed, incl. Purine nucleosidase activity, and Thiamine biosynthesis protein (ThiI)
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1055_Mixed,_incl._Purine_nucleosidase_activity,_and_Thiamine_biosynthesis_protein_(ThiI)


id: CL:1068
description: Sulfur relay system, and GAF domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1068_Sulfur_relay_system,_and_GAF_domain


id: CL:1087
description: Mixed, incl. tRNA threonylcarbamoyladenosine modification, and Bacterial nucleoid
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1087_Mixed,_incl._tRNA_threonylcarbamoyladenosine_modification,_and_Bacterial_nucleoid


id: CL:1089
description: Bacterial nucleoid, and dTTP metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1089_Bacterial_nucleoid,_and_dTTP_metabolic_process


id: CL:1117
description: Mixed, incl. rRNA processing, and Deoxyribonuclease, TatD-related, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1117_Mixed,_incl._rRNA_processing,_and_Deoxyribonuclease,_TatD-related,_conserved_site


id: CL:1120
description: Mixed, incl. Deoxyribonuclease, TatD-related, conserved site, and Isoprene biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1120_Mixed,_incl._Deoxyribonuclease,_TatD-related,_conserved_site,_and_Isoprene_biosynthesis


id: CL:1137
description: Mixed, incl. Microbial metabolism in diverse environments, and Organic acid biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1137_Mixed,_incl._Microbial_metabolism_in_diverse_environments,_and_Organic_acid_biosynthetic_process


id: CL:1138
description: Mixed, incl. Microbial metabolism in diverse environments, and Organic acid biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1138_Mixed,_incl._Microbial_metabolism_in_diverse_environments,_and_Organic_acid_biosynthetic_process


id: CL:1139
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1139_Mixed,_incl._Microbial_metabolism_in_diverse_environments,_and_Amino_sugar_and_nucleotide_sugar_metabolism

description:
  Mixed, incl. Microbial metabolism in diverse environments, and Amino sugar and nucleotide sugar metabolism


id: CL:1140
description: Carbohydrate metabolic process, and NAD(P)-binding domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1140_Carbohydrate_metabolic_process,_and_NAD(P)-binding_domain_superfamily


id: CL:1141
description: Carbohydrate metabolic process, and Periplasmic binding protein-like I
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1141_Carbohydrate_metabolic_process,_and_Periplasmic_binding_protein-like_I


id: CL:1142
description: Carbohydrate metabolic process, and Periplasmic binding protein-like I
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1142_Carbohydrate_metabolic_process,_and_Periplasmic_binding_protein-like_I


id: CL:1143
description: Mixed, incl. Pentose phosphate pathway, and Glycolysis
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1143_Mixed,_incl._Pentose_phosphate_pathway,_and_Glycolysis


id: CL:1144
description: Pentose phosphate pathway, and Glycolysis
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1144_Pentose_phosphate_pathway,_and_Glycolysis


id: CL:1146
description: Glycolytic process, and Short-chain dehydrogenase/reductase, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1146_Glycolytic_process,_and_Short-chain_dehydrogenase/reductase,_conserved_site


id: CL:1147
description: Gluconeogenesis, and Glycolysis
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1147_Gluconeogenesis,_and_Glycolysis


id: CL:1149
description: Glycolysis, and Aldehyde-lyase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1149_Glycolysis,_and_Aldehyde-lyase_activity


id: CL:1170
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1170_3-oxoacyl-[acyl-carrier-protein]_reductase_(NADPH)_activity,_and_Glucose_6-phosphate_metabolic_process

description:
  3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity, and Glucose 6-phosphate metabolic process


id: CL:1188
description: NADPH regeneration, and Carbohydrate kinase, FGGY, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1188_NADPH_regeneration,_and_Carbohydrate_kinase,_FGGY,_N-terminal


id: CL:1199
description: Import across plasma membrane, and Periplasmic binding protein-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1199_Import_across_plasma_membrane,_and_Periplasmic_binding_protein-like_domain


id: CL:1218
description: Galactose metabolism, and O-Antigen nucleotide sugar biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1218_Galactose_metabolism,_and_O-Antigen_nucleotide_sugar_biosynthesis


id: CL:1219
description: O-Antigen nucleotide sugar biosynthesis, and SIS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1219_O-Antigen_nucleotide_sugar_biosynthesis,_and_SIS_domain


id: CL:1220
description: NAD dependent epimerase/dehydratase family, and Uridylyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1220_NAD_dependent_epimerase/dehydratase_family,_and_Uridylyltransferase_activity


id: CL:1231
description: Fructose and mannose metabolism, and SIS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1231_Fructose_and_mannose_metabolism,_and_SIS_domain


id: CL:1240
description: Galactose metabolism, and Periplasmic binding protein-like I
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1240_Galactose_metabolism,_and_Periplasmic_binding_protein-like_I


id: CL:1242
description: Galactosidase activity, and Aldose 1-epimerase
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1242_Galactosidase_activity,_and_Aldose_1-epimerase


id: CL:1259
description: Mixed, incl. SIS domain, and Carbohydrate kinase PfkB
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1259_Mixed,_incl._SIS_domain,_and_Carbohydrate_kinase_PfkB


id: CL:1270
description: Alcohol dehydrogenase-like, N-terminal, and Aldo-keto reductase
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1270_Alcohol_dehydrogenase-like,_N-terminal,_and_Aldo-keto_reductase


id: CL:1272
description: Alcohol dehydrogenase-like, N-terminal, and Iron-type alcohol dehydrogenase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1272_Alcohol_dehydrogenase-like,_N-terminal,_and_Iron-type_alcohol_dehydrogenase-like


id: CL:1274
description: Polyketide synthase, enoylreductase domain, and Iron-type alcohol dehydrogenase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1274_Polyketide_synthase,_enoylreductase_domain,_and_Iron-type_alcohol_dehydrogenase-like


id: CL:1311
description: Mixed, incl. Pyruvate metabolism, and Lipoic acid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1311_Mixed,_incl._Pyruvate_metabolism,_and_Lipoic_acid_metabolism


id: CL:1313
description: Mixed, incl. Lactate dehydrogenase activity, and Fumarate lyase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1313_Mixed,_incl._Lactate_dehydrogenase_activity,_and_Fumarate_lyase_family


id: CL:1314
description: Lactate dehydrogenase activity, and L-lactate dehydrogenase, active site
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1314_Lactate_dehydrogenase_activity,_and_L-lactate_dehydrogenase,_active_site


id: CL:1318
description: L-lactate/malate dehydrogenase, and Aminoacid dehydrogenase-like, N-terminal domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1318_L-lactate/malate_dehydrogenase,_and_Aminoacid_dehydrogenase-like,_N-terminal_domain_superfamily


id: CL:1334
description: Fumarate lyase family, and HI0933-like protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1334_Fumarate_lyase_family,_and_HI0933-like_protein


id: CL:1354
description: Lipoic acid metabolism, and Lipoyl
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1354_Lipoic_acid_metabolism,_and_Lipoyl


id: CL:1355
description: Citrate cycle (TCA cycle), and Pyridine nucleotide-disulphide oxidoreductase, class I
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1355_Citrate_cycle_(TCA_cycle),_and_Pyridine_nucleotide-disulphide_oxidoreductase,_class_I


id: CL:1378
description: Mixed, incl. Fatty acid metabolic process, and Lipoteichoic acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1378_Mixed,_incl._Fatty_acid_metabolic_process,_and_Lipoteichoic_acid_metabolic_process


id: CL:1379
description: Fatty acid metabolic process, and Lipoteichoic acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1379_Fatty_acid_metabolic_process,_and_Lipoteichoic_acid_metabolic_process


id: CL:1380
description: Fatty acid metabolism, and Lipoteichoic acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1380_Fatty_acid_metabolism,_and_Lipoteichoic_acid_metabolic_process


id: CL:1386
description: CoA carboxylase activity, and Thiolase, N-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1386_CoA_carboxylase_activity,_and_Thiolase,_N-terminal_domain


id: CL:1396
description: Biotin metabolism, and Acyl carrier activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1396_Biotin_metabolism,_and_Acyl_carrier_activity


id: CL:1410
description: Lipoteichoic acid metabolic process, and Acyl carrier activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1410_Lipoteichoic_acid_metabolic_process,_and_Acyl_carrier_activity


id: CL:1421
description: Mixed, incl. 3-hydroxyacyl-CoA dehydrogenase, and Thioesterase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1421_Mixed,_incl._3-hydroxyacyl-CoA_dehydrogenase,_and_Thioesterase_domain


id: CL:1423
description: 3-hydroxyacyl-CoA dehydrogenase, and Lipid modification
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1423_3-hydroxyacyl-CoA_dehydrogenase,_and_Lipid_modification


id: CL:1437
description: Taurine and hypotaurine metabolism, and Aminobenzoate degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1437_Taurine_and_hypotaurine_metabolism,_and_Aminobenzoate_degradation


id: CL:1446
description: Mixed, incl. Alpha/beta hydrolase fold, and Deoxynucleoside kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1446_Mixed,_incl._Alpha/beta_hydrolase_fold,_and_Deoxynucleoside_kinase


id: CL:1450
description: Peptidase M16, C-terminal, and NADH dehydrogenase (quinone) activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1450_Peptidase_M16,_C-terminal,_and_NADH_dehydrogenase_(quinone)_activity


id: CL:147
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:147_Structural_constituent_of_ribosome


id: CL:1471
description: Mixed, incl. Response to herbicide, and Sequence-specific DNA binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1471_Mixed,_incl._Response_to_herbicide,_and_Sequence-specific_DNA_binding


id: CL:1473
description: Response to herbicide, and Sequence-specific DNA binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1473_Response_to_herbicide,_and_Sequence-specific_DNA_binding


id: CL:1485
description: Mixed, incl. AAA C-terminal domain, and Purine nucleobase transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1485_Mixed,_incl._AAA_C-terminal_domain,_and_Purine_nucleobase_transport


id: CL:149
description: Large ribosomal subunit, and Large ribosomal subunit rRNA binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:149_Large_ribosomal_subunit,_and_Large_ribosomal_subunit_rRNA_binding


id: CL:1494
description: Mixed, incl. Biosynthesis of amino acids, and Aminopeptidase
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1494_Mixed,_incl._Biosynthesis_of_amino_acids,_and_Aminopeptidase


id: CL:1495
description: Biosynthesis of amino acids, and Aminopeptidase
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1495_Biosynthesis_of_amino_acids,_and_Aminopeptidase


id: CL:1496
description: Biosynthesis of amino acids, and Aminopeptidase
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1496_Biosynthesis_of_amino_acids,_and_Aminopeptidase


id: CL:1499
description: Sulfur amino acid metabolic process, and Pectin lyase fold
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1499_Sulfur_amino_acid_metabolic_process,_and_Pectin_lyase_fold


id: CL:1501
description: Sulfur amino acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1501_Sulfur_amino_acid_metabolic_process


id: CL:1503
description: S-methyltransferase activity, and One-carbon metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1503_S-methyltransferase_activity,_and_One-carbon_metabolic_process


id: CL:1538
description: Diaminopimelate metabolic process, and Peptidase family M20/M25/M40
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1538_Diaminopimelate_metabolic_process,_and_Peptidase_family_M20/M25/M40


id: CL:1539
description: Lysine biosynthesis, and 2-Oxocarboxylic acid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1539_Lysine_biosynthesis,_and_2-Oxocarboxylic_acid_metabolism


id: CL:1560
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1560_N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine_deformylase/Succinyl-diaminopimelate_desuccinylase,_and_Peptidase_family_M20/M25/M40

description:
  N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase/Succinyl-diaminopimelate desuccinylase, and Peptidase family M20/M25/M40


id: CL:1574
description: Aminopeptidase, and Peptidase M24
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1574_Aminopeptidase,_and_Peptidase_M24


id: CL:1578
description: ArgE/DapE/ACY1/CPG2/YscS, conserved site, and Peptidase M24
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1578_ArgE/DapE/ACY1/CPG2/YscS,_conserved_site,_and_Peptidase_M24


id: CL:1598
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1598_Mixed,_incl._Glutamine_synthetase/guanido_kinase,_catalytic_domain,_and_Glutamine_amidotransferase_class-I

description:
  Mixed, incl. Glutamine synthetase/guanido kinase, catalytic domain, and Glutamine amidotransferase class-I


id: CL:1617
description: Arginine metabolic process, and Mtb iron assimilation by chelation
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1617_Arginine_metabolic_process,_and_Mtb_iron_assimilation_by_chelation


id: CL:1633
description: Mtb iron assimilation by chelation, and N-acetylmuramoyl-L-alanine amidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1633_Mtb_iron_assimilation_by_chelation,_and_N-acetylmuramoyl-L-alanine_amidase_activity


id: CL:1644
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1644_Mixed,_incl._Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_disulfide_as_acceptor,_and_Lysyltransferase_activity

description:
  Mixed, incl. Oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor, and Lysyltransferase activity


id: CL:1660
description: S-adenosyl-L-methionine, and Protein alkylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1660_S-adenosyl-L-methionine,_and_Protein_alkylation


id: CL:1670
description: Mixed, incl. Protein alkylation, and PUA-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1670_Mixed,_incl._Protein_alkylation,_and_PUA-like_superfamily


id: CL:1679
description: Mixed, incl. Glycerophospholipid metabolism, and Acid phosphatase homologues
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1679_Mixed,_incl._Glycerophospholipid_metabolism,_and_Acid_phosphatase_homologues


id: CL:1680
description: Mixed, incl. Glycerophospholipid metabolism, and Acid phosphatase homologues
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1680_Mixed,_incl._Glycerophospholipid_metabolism,_and_Acid_phosphatase_homologues


id: CL:1681
description: Glycerophospholipid metabolism, and Acid phosphatase homologues
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1681_Glycerophospholipid_metabolism,_and_Acid_phosphatase_homologues


id: CL:1683
description: Glycerolipid metabolic process, and Phosphatidylglycerophosphatase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1683_Glycerolipid_metabolic_process,_and_Phosphatidylglycerophosphatase_activity


id: CL:1685
description: Phosphatidylglycerophosphatase activity, and Phosphatidylglycerol metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1685_Phosphatidylglycerophosphatase_activity,_and_Phosphatidylglycerol_metabolic_process


id: CL:1715
description: Mixed, incl. Putative adhesin, and Cardiolipin synthase
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1715_Mixed,_incl._Putative_adhesin,_and_Cardiolipin_synthase


id: CL:1724
description: Mixed, incl. Thiamine pyrophosphate, and SNARE associated Golgi protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1724_Mixed,_incl._Thiamine_pyrophosphate,_and_SNARE_associated_Golgi_protein


id: CL:1734
description: Mixed, incl. Ribonuclease J, and Diacylglycerol/lipid kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1734_Mixed,_incl._Ribonuclease_J,_and_Diacylglycerol/lipid_kinase


id: CL:1754
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1754_Mixed,_incl._Terpenoid_backbone_biosynthesis,_and_ABC_transporter_type_1,_transmembrane_domain_superfamily

description:
  Mixed, incl. Terpenoid backbone biosynthesis, and ABC transporter type 1, transmembrane domain superfamily


id: CL:1755
description: Mixed, incl. Terpenoid backbone biosynthesis, and PD-(D/E)XK nuclease superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1755_Mixed,_incl._Terpenoid_backbone_biosynthesis,_and_PD-(D/E)XK_nuclease_superfamily


id: CL:1757
description: Mixed, incl. PD-(D/E)XK nuclease superfamily, and Sulfite exporter TauE/SafE
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1757_Mixed,_incl._PD-(D/E)XK_nuclease_superfamily,_and_Sulfite_exporter_TauE/SafE


id: CL:1794
description: Cytochrome complex, and Type 1 protein exporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1794_Cytochrome_complex,_and_Type_1_protein_exporter


id: CL:1809
description: Mostly uncharacterized, incl. Establishment of competence for transformation, and UspA
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1809_Mostly_uncharacterized,_incl._Establishment_of_competence_for_transformation,_and_UspA


id: CL:1811
description: Mixed, incl. Establishment of competence for transformation, and UspA
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1811_Mixed,_incl._Establishment_of_competence_for_transformation,_and_UspA


id: CL:1812
description: Mixed, incl. UspA, and Glycerolipid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1812_Mixed,_incl._UspA,_and_Glycerolipid_metabolism


id: CL:1813
description: Mixed, incl. UspA, and Sulfatase, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1813_Mixed,_incl._UspA,_and_Sulfatase,_N-terminal


id: CL:1814
description: Mixed, incl. Thioredoxin-like superfamily, and PepSY domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1814_Mixed,_incl._Thioredoxin-like_superfamily,_and_PepSY_domain


id: CL:1816
description: Mixed, incl. ArsC family, and DivIVA family
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1816_Mixed,_incl._ArsC_family,_and_DivIVA_family


id: CL:182
description: Mixed, incl. Ribosomal subunit, and Initiation factor
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:182_Mixed,_incl._Ribosomal_subunit,_and_Initiation_factor


id: CL:1832
description: Mixed, incl. PepSY domain, and Deoxyribonucleoside triphosphate catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1832_Mixed,_incl._PepSY_domain,_and_Deoxyribonucleoside_triphosphate_catabolic_process


id: CL:184
description: Small ribosomal subunit, and K Homology domain, type 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:184_Small_ribosomal_subunit,_and_K_Homology_domain,_type_2


id: CL:1845
description: Mixed, incl. UspA, and Sulfatase, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1845_Mixed,_incl._UspA,_and_Sulfatase,_N-terminal


id: CL:1849
description: Sulfatase, and N-6 DNA Methylase
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1849_Sulfatase,_and_N-6_DNA_Methylase


id: CL:1863
description: YibE/F-like, and Glycosyltransferase subfamily 4-like, N-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1863_YibE/F-like,_and_Glycosyltransferase_subfamily_4-like,_N-terminal_domain


id: CL:1874
description: Mixed, incl. Sporulation, and PepSY domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1874_Mixed,_incl._Sporulation,_and_PepSY_domain


id: CL:1876
description: Mixed, incl. Trigger factor/SurA domain superfamily, and AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1876_Mixed,_incl._Trigger_factor/SurA_domain_superfamily,_and_AAA_domain


id: CL:1888
description: Mixed, incl. RNA (guanine-N7)-methylation, and HesB-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1888_Mixed,_incl._RNA_(guanine-N7)-methylation,_and_HesB-like_domain_superfamily


id: CL:1900
description: Mixed, incl. Establishment of competence for transformation, and Signal peptide processing
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1900_Mixed,_incl._Establishment_of_competence_for_transformation,_and_Signal_peptide_processing


id: CL:1903
description: Prokaryotic N-terminal methylation site, and Secretion
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1903_Prokaryotic_N-terminal_methylation_site,_and_Secretion


id: CL:1914
description: Mixed, incl. Signal peptide processing, and DNA replication initiation
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1914_Mixed,_incl._Signal_peptide_processing,_and_DNA_replication_initiation


id: CL:1935
description: Mixed, incl. Cell inner membrane, and NrdI Flavodoxin like
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1935_Mixed,_incl._Cell_inner_membrane,_and_NrdI_Flavodoxin_like


id: CL:1946
description: Mixed, incl. Alanine, aspartate and glutamate metabolism, and Cation transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1946_Mixed,_incl._Alanine,_aspartate_and_glutamate_metabolism,_and_Cation_transport


id: CL:1947
description: Mixed, incl. Alanine, aspartate and glutamate metabolism, and E1-E2 ATPase
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1947_Mixed,_incl._Alanine,_aspartate_and_glutamate_metabolism,_and_E1-E2_ATPase


id: CL:1948
description: Mixed, incl. E1-E2 ATPase, and Crp-type HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1948_Mixed,_incl._E1-E2_ATPase,_and_Crp-type_HTH_domain


id: CL:1950
description: Mixed, incl. Crp-type HTH domain, and Iron ion homeostasis
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1950_Mixed,_incl._Crp-type_HTH_domain,_and_Iron_ion_homeostasis


id: CL:1971
description: Mixed, incl. Cyanoamino acid metabolism, and Aspartate racemase
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1971_Mixed,_incl._Cyanoamino_acid_metabolism,_and_Aspartate_racemase


id: CL:1973
description: Aspartate racemase, and Asparaginase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1973_Aspartate_racemase,_and_Asparaginase_activity


id: CL:198
description: Ribosomal protein L2, domain 2, and Ribosomal protein S13-like, H2TH
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:198_Ribosomal_protein_L2,_domain_2,_and_Ribosomal_protein_S13-like,_H2TH


id: CL:1990
description: Mixed, incl. NRAMP family, and Ferric-uptake regulator
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1990_Mixed,_incl._NRAMP_family,_and_Ferric-uptake_regulator


id: CL:1992
description: Mixed, incl. Ferric-uptake regulator, and NRAMP family
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1992_Mixed,_incl._Ferric-uptake_regulator,_and_NRAMP_family


id: CL:1995
description: Mixed, incl. Cell adhesion, and Ferric-uptake regulator
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:1995_Mixed,_incl._Cell_adhesion,_and_Ferric-uptake_regulator


id: CL:2020
description: Threonine/Serine exporter, ThrE, and Cation efflux family
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2020_Threonine/Serine_exporter,_ThrE,_and_Cation_efflux_family


id: CL:2029
description: Mixed, incl. MatE, and Helix-turn-helix, HxlR type
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2029_Mixed,_incl._MatE,_and_Helix-turn-helix,_HxlR_type


id: CL:2030
description: Mixed, incl. MatE, and Helix-turn-helix, HxlR type
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2030_Mixed,_incl._MatE,_and_Helix-turn-helix,_HxlR_type


id: CL:2032
description: Mixed, incl. Enzyme binding, and RNA 2-O ribose methyltransferase substrate binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2032_Mixed,_incl._Enzyme_binding,_and_RNA_2-O_ribose_methyltransferase_substrate_binding


id: CL:2054
description: Mixed, incl. HTH ArsR-type DNA-binding domain, and ABC transporter, lipoprotein release, LolD-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2054_Mixed,_incl._HTH_ArsR-type_DNA-binding_domain,_and_ABC_transporter,_lipoprotein_release,_LolD-like


id: CL:2068
description: Mixed, incl. Phosphate ion transport, and Iron-sulfur cluster assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2068_Mixed,_incl._Phosphate_ion_transport,_and_Iron-sulfur_cluster_assembly


id: CL:2069
description: Mixed, incl. Phosphate ion transport, and Peptidase family C69
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2069_Mixed,_incl._Phosphate_ion_transport,_and_Peptidase_family_C69


id: CL:2071
description: Mixed, incl. Lipoprotein, and Alditol phosphate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2071_Mixed,_incl._Lipoprotein,_and_Alditol_phosphate_metabolic_process


id: CL:2098
description: Mixed, incl. Iron-sulfur cluster assembly, and ATP-cone domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2098_Mixed,_incl._Iron-sulfur_cluster_assembly,_and_ATP-cone_domain


id: CL:2101
description: SUF system FeS cluster assembly, SufBD, N-terminal, and Iron ion binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2101_SUF_system_FeS_cluster_assembly,_SufBD,_N-terminal,_and_Iron_ion_binding


id: CL:2120
description: Mixed, incl. Transmembrane, and Organic hydroxy compound biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2120_Mixed,_incl._Transmembrane,_and_Organic_hydroxy_compound_biosynthetic_process


id: CL:2121
description: Mixed, incl. Transmembrane, and DNA binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2121_Mixed,_incl._Transmembrane,_and_DNA_binding


id: CL:2122
description: Mixed, incl. Transmembrane, and Pseudouridine synthase, RluA-like, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2122_Mixed,_incl._Transmembrane,_and_Pseudouridine_synthase,_RluA-like,_conserved_site


id: CL:2123
description: Mixed, incl. beta-Lactam resistance, and Transmembrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2123_Mixed,_incl._beta-Lactam_resistance,_and_Transmembrane


id: CL:2124
description: Mixed, incl. Transmembrane, and Helix-turn-helix XRE-family like proteins
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2124_Mixed,_incl._Transmembrane,_and_Helix-turn-helix_XRE-family_like_proteins


id: CL:2126
description: Mixed, incl. Transmembrane, and Helix-turn-helix XRE-family like proteins
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2126_Mixed,_incl._Transmembrane,_and_Helix-turn-helix_XRE-family_like_proteins


id: CL:2128
description: Mostly uncharacterized, incl. Bacterial membrane protein YfhO, and AzlC protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2128_Mostly_uncharacterized,_incl._Bacterial_membrane_protein_YfhO,_and_AzlC_protein


id: CL:2129
description: Mostly uncharacterized, incl. Bacterial membrane protein YfhO, and Ppx/GppA phosphatase
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2129_Mostly_uncharacterized,_incl._Bacterial_membrane_protein_YfhO,_and_Ppx/GppA_phosphatase


id: CL:2131
description: Mostly uncharacterized, incl. Ppx/GppA phosphatase, and dUTP diphosphatase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2131_Mostly_uncharacterized,_incl._Ppx/GppA_phosphatase,_and_dUTP_diphosphatase_activity


id: CL:2134
description: Mixed, incl. dUTP diphosphatase activity, and Coiled coil
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2134_Mixed,_incl._dUTP_diphosphatase_activity,_and_Coiled_coil


id: CL:2148
description: Mostly uncharacterized, incl. Helix-turn-helix XRE-family like proteins
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2148_Mostly_uncharacterized,_incl._Helix-turn-helix_XRE-family_like_proteins


id: CL:2170
description: Mixed, incl. AzlC protein, and Iron ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2170_Mixed,_incl._AzlC_protein,_and_Iron_ion_transport


id: CL:2189
description: Mixed, incl. CAAX-box protein processing, and beta-Lactam resistance
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2189_Mixed,_incl._CAAX-box_protein_processing,_and_beta-Lactam_resistance


id: CL:2190
description: Mostly uncharacterized, incl. Ubiquinone, and CAAX-box protein processing
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2190_Mostly_uncharacterized,_incl._Ubiquinone,_and_CAAX-box_protein_processing


id: CL:2191
description: Mixed, incl. CAAX-box protein processing, and SGNH hydrolase-type esterase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2191_Mixed,_incl._CAAX-box_protein_processing,_and_SGNH_hydrolase-type_esterase_domain


id: CL:2193
description: Mixed, incl. SGNH hydrolase-type esterase domain, and DNA-binding HTH domain, TetR-type
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2193_Mixed,_incl._SGNH_hydrolase-type_esterase_domain,_and_DNA-binding_HTH_domain,_TetR-type


id: CL:2211
description: Mixed, incl. Ubiquinone, and Tetratricopeptide repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2211_Mixed,_incl._Ubiquinone,_and_Tetratricopeptide_repeat


id: CL:222
description: RNA polymerase, and Sigma-70, region 4
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:222_RNA_polymerase,_and_Sigma-70,_region_4


id: CL:2223
description: Mixed, incl. TTHA1013/TTHA0281-like, and CAAX-box protein processing
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2223_Mixed,_incl._TTHA1013/TTHA0281-like,_and_CAAX-box_protein_processing


id: CL:2244
description: Mixed, incl. Putative adhesin, and Mechanosensitive ion channel activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2244_Mixed,_incl._Putative_adhesin,_and_Mechanosensitive_ion_channel_activity


id: CL:2255
description: Mixed, incl. beta-Lactam resistance, and FAD binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2255_Mixed,_incl._beta-Lactam_resistance,_and_FAD_binding


id: CL:2257
description: Mixed, incl. Beta-lactamase activity, and DHHA1 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2257_Mixed,_incl._Beta-lactamase_activity,_and_DHHA1_domain


id: CL:2280
description: Mixed, incl. Pseudouridine synthase, RluA-like, conserved site, and Response to pH
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2280_Mixed,_incl._Pseudouridine_synthase,_RluA-like,_conserved_site,_and_Response_to_pH


id: CL:2290
description: Mostly uncharacterized, incl. AAA C-terminal domain, and Alkylbase DNA N-glycosylase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2290_Mostly_uncharacterized,_incl._AAA_C-terminal_domain,_and_Alkylbase_DNA_N-glycosylase_activity


id: CL:2293
description: Mixed, incl. Alkylbase DNA N-glycosylase activity, and Porphyrin and chlorophyll metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2293_Mixed,_incl._Alkylbase_DNA_N-glycosylase_activity,_and_Porphyrin_and_chlorophyll_metabolism


id: CL:2318
description: Mixed, incl. ABC transporters, and Thiamine biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2318_Mixed,_incl._ABC_transporters,_and_Thiamine_biosynthetic_process


id: CL:2319
description: Mixed, incl. MetI-like superfamily, and Polyamine transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2319_Mixed,_incl._MetI-like_superfamily,_and_Polyamine_transport


id: CL:2320
description: Mixed, incl. ABC-type transporter activity, and GGDEF domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2320_Mixed,_incl._ABC-type_transporter_activity,_and_GGDEF_domain


id: CL:2322
description: Mixed, incl. GGDEF domain, and Cyclase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2322_Mixed,_incl._GGDEF_domain,_and_Cyclase_activity


id: CL:2339
description: Polyamine transport, and ABC-type polyamine transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2339_Polyamine_transport,_and_ABC-type_polyamine_transporter_activity


id: CL:2351
description: Organic cation transport, and ABC transporter type 1, transmembrane domain MetI-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2351_Organic_cation_transport,_and_ABC_transporter_type_1,_transmembrane_domain_MetI-like


id: CL:2361
description: Mixed, incl. Thiamine biosynthetic process, and ABC transporter, CbiO/EcfA subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2361_Mixed,_incl._Thiamine_biosynthetic_process,_and_ABC_transporter,_CbiO/EcfA_subunit


id: CL:2362
description: Mixed, incl. ABC transporter, CbiO/EcfA subunit, and Cobalt transport protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2362_Mixed,_incl._ABC_transporter,_CbiO/EcfA_subunit,_and_Cobalt_transport_protein


id: CL:2363
description: ABC transporter, CbiO/EcfA subunit, and Cobalt transport protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2363_ABC_transporter,_CbiO/EcfA_subunit,_and_Cobalt_transport_protein


id: CL:2372
description: Mixed, incl. Cobalt transport protein, and Cation/H+ exchanger
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2372_Mixed,_incl._Cobalt_transport_protein,_and_Cation/H+_exchanger


id: CL:2381
description: Thiamine biosynthetic process, and Lipid catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2381_Thiamine_biosynthetic_process,_and_Lipid_catabolic_process


id: CL:2395
description: ABC transporters, and Signaling
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2395_ABC_transporters,_and_Signaling


id: CL:2396
description: ABC transporters, and Enzyme binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2396_ABC_transporters,_and_Enzyme_binding


id: CL:2397
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2397_Amino_acid_ABC_transporter,_permease_protein,_3-TM_domain,_and_Solute-binding_protein_family_3/N-terminal_domain_of_MltF

description:
  Amino acid ABC transporter, permease protein, 3-TM domain, and Solute-binding protein family 3/N-terminal domain of MltF


id: CL:2398
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2398_Solute-binding_protein_family_3/N-terminal_domain_of_MltF,_and_Amino_acid_ABC_transporter,_permease_protein,_3-TM_domain

description:
  Solute-binding protein family 3/N-terminal domain of MltF, and Amino acid ABC transporter, permease protein, 3-TM domain


id: CL:2399
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2399_Bacterial_periplasmic_substrate-binding_proteins,_and_ABC-type_amino_acid_transport_system,_ATPase_component,_HisP-type

description:
  Bacterial periplasmic substrate-binding proteins, and ABC-type amino acid transport system, ATPase component, HisP-type


id: CL:2401
description: Ligand-gated channel activity, and Amino acid ABC transporter, permease protein, 3-TM domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2401_Ligand-gated_channel_activity,_and_Amino_acid_ABC_transporter,_permease_protein,_3-TM_domain


id: CL:2418
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2418_Bacterial_periplasmic_substrate-binding_proteins,_and_ABC-type_amino_acid_transport_system,_ATPase_component,_HisP-type

description:
  Bacterial periplasmic substrate-binding proteins, and ABC-type amino acid transport system, ATPase component, HisP-type


id: CL:2431
description: Ligand-gated channel activity, and Amino acid ABC transporter, permease protein, 3-TM domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2431_Ligand-gated_channel_activity,_and_Amino_acid_ABC_transporter,_permease_protein,_3-TM_domain


id: CL:2447
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2447_Uroporphyrinogen_decarboxylase_(URO-D),_and_Amino_acid_ABC_transporter,_permease_protein,_3-TM_domain

description:
  Uroporphyrinogen decarboxylase (URO-D), and Amino acid ABC transporter, permease protein, 3-TM domain


id: CL:2456
description: Mixed, incl. ABC3 transporter permease protein domain, and MacB, ATP-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2456_Mixed,_incl._ABC3_transporter_permease_protein_domain,_and_MacB,_ATP-binding_domain


id: CL:2458
description: Mixed, incl. ABC3 transporter permease protein domain, and MacB, ATP-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2458_Mixed,_incl._ABC3_transporter_permease_protein_domain,_and_MacB,_ATP-binding_domain


id: CL:2460
description: FtsX-like permease family, and MacB, ATP-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2460_FtsX-like_permease_family,_and_MacB,_ATP-binding_domain


id: CL:2475
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2475_Mixed,_incl._Carbohydrate_derivative_transmembrane_transporter_activity,_and_MacB,_ATP-binding_domain

description:
  Mixed, incl. Carbohydrate derivative transmembrane transporter activity, and MacB, ATP-binding domain


id: CL:2490
description: ABC-type transporter activity, and ABC transporters
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2490_ABC-type_transporter_activity,_and_ABC_transporters


id: CL:2505
description: Mixed, incl. Signaling, and EAL domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2505_Mixed,_incl._Signaling,_and_EAL_domain


id: CL:2509
description: Phosphorelay signal transduction system, and tRNA 3-trailer cleavage
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2509_Phosphorelay_signal_transduction_system,_and_tRNA_3-trailer_cleavage


id: CL:2511
description: Phosphorelay signal transduction system
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2511_Phosphorelay_signal_transduction_system


id: CL:2514
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2514_OmpR/PhoB-type_DNA-binding_domain,_and_Signal_transduction_histidine_kinase,_dimerisation/phosphoacceptor_domain

description:
  OmpR/PhoB-type DNA-binding domain, and Signal transduction histidine kinase, dimerisation/phosphoacceptor domain


id: CL:2533
description: Mixed, incl. PAS domain, and tRNA 3-trailer cleavage
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2533_Mixed,_incl._PAS_domain,_and_tRNA_3-trailer_cleavage


id: CL:2573
description: Mixed, incl. Calcineurin-like phosphoesterase, and MerR-type HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2573_Mixed,_incl._Calcineurin-like_phosphoesterase,_and_MerR-type_HTH_domain


id: CL:2588
description: Mixed, incl. Methyltransferase domain, and Sodium/solute symporter superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2588_Mixed,_incl._Methyltransferase_domain,_and_Sodium/solute_symporter_superfamily


id: CL:2597
description: Mixed, incl. Riboflavin metabolism, and PAS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2597_Mixed,_incl._Riboflavin_metabolism,_and_PAS_domain


id: CL:2598
description: Mixed, incl. Riboflavin metabolism, and PAS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2598_Mixed,_incl._Riboflavin_metabolism,_and_PAS_domain


id: CL:2600
description: Mixed, incl. Riboflavin metabolism, and Alpha/beta hydrolase fold
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2600_Mixed,_incl._Riboflavin_metabolism,_and_Alpha/beta_hydrolase_fold


id: CL:2601
description: Mixed, incl. Dicarboxylic acid transport, and Toxin-antitoxin system, antidote protein, HigA
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2601_Mixed,_incl._Dicarboxylic_acid_transport,_and_Toxin-antitoxin_system,_antidote_protein,_HigA


id: CL:2612
description: Sucrose-6F-phosphate phosphohydrolase, and Alpha/beta hydrolase fold
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2612_Sucrose-6F-phosphate_phosphohydrolase,_and_Alpha/beta_hydrolase_fold


id: CL:2624
description: Mixed, incl. NADPH-dependent FMN reductase-like, and Bacterial chemotaxis
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2624_Mixed,_incl._NADPH-dependent_FMN_reductase-like,_and_Bacterial_chemotaxis


id: CL:2626
description: NADPH-dependent FMN reductase-like, and TRAM domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2626_NADPH-dependent_FMN_reductase-like,_and_TRAM_domain


id: CL:2644
description: Mixed, incl. Pantothenate metabolic process, and Phosphotransferase system, EIIC
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2644_Mixed,_incl._Pantothenate_metabolic_process,_and_Phosphotransferase_system,_EIIC


id: CL:2662
description: Mixed, incl. Polysaccharide biosynthetic process, and Glycosyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2662_Mixed,_incl._Polysaccharide_biosynthetic_process,_and_Glycosyltransferase_activity


id: CL:2665
description: Polysaccharide biosynthetic process, and Glycosyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2665_Polysaccharide_biosynthetic_process,_and_Glycosyltransferase_activity


id: CL:2666
description: Mixed, incl. Polysaccharide biosynthetic process, and Glycosyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2666_Mixed,_incl._Polysaccharide_biosynthetic_process,_and_Glycosyltransferase_activity


id: CL:2667
description: Mixed, incl. Polysaccharide biosynthetic process, and Glycosyl transferase, family 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2667_Mixed,_incl._Polysaccharide_biosynthetic_process,_and_Glycosyl_transferase,_family_1


id: CL:2668
description: Polysaccharide biosynthetic process, and LytR_cpsA_psr family
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2668_Polysaccharide_biosynthetic_process,_and_LytR_cpsA_psr_family


id: CL:2670
description: Polysaccharide biosynthetic process, and O-Antigen nucleotide sugar biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2670_Polysaccharide_biosynthetic_process,_and_O-Antigen_nucleotide_sugar_biosynthesis


id: CL:2671
description: Polysaccharide biosynthetic process, and Glycosyl transferase family 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2671_Polysaccharide_biosynthetic_process,_and_Glycosyl_transferase_family_2


id: CL:2674
description: Mixed, incl. Bacterial sugar transferase, and Protein tyrosine kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2674_Mixed,_incl._Bacterial_sugar_transferase,_and_Protein_tyrosine_kinase_activity


id: CL:2690
description: Mixed, incl. Bacterial sugar transferase, and Glycosyltransferase Family 4
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2690_Mixed,_incl._Bacterial_sugar_transferase,_and_Glycosyltransferase_Family_4


id: CL:2705
description: Capsule organization, and Solute:cation symporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2705_Capsule_organization,_and_Solute:cation_symporter_activity


id: CL:2715
description: Mixed, incl. Glycosyl transferase, family 1, and Biosynthesis of unsaturated fatty acids
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2715_Mixed,_incl._Glycosyl_transferase,_family_1,_and_Biosynthesis_of_unsaturated_fatty_acids


id: CL:2716
description: Mixed, incl. Xaa-Pro dipeptidyl-peptidase-like domain, and Glycosyltransferase like family 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2716_Mixed,_incl._Xaa-Pro_dipeptidyl-peptidase-like_domain,_and_Glycosyltransferase_like_family_2


id: CL:2729
description: Glycosyl transferase, family 1, and Serine aminopeptidase, S33
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2729_Glycosyl_transferase,_family_1,_and_Serine_aminopeptidase,_S33


id: CL:2741
description: Mixed, incl. Cell wall/choline-binding repeat, and MobA-like NTP transferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2741_Mixed,_incl._Cell_wall/choline-binding_repeat,_and_MobA-like_NTP_transferase


id: CL:2743
description: Mixed, incl. MobA-like NTP transferase, and Cell wall/choline-binding repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2743_Mixed,_incl._MobA-like_NTP_transferase,_and_Cell_wall/choline-binding_repeat


id: CL:2778
description: Mixed, incl. Acyltransferase family, and Mannosylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2778_Mixed,_incl._Acyltransferase_family,_and_Mannosylation


id: CL:2796
description: Mostly uncharacterized, incl. Aminoacyl-tRNA editing domain, and EamA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2796_Mostly_uncharacterized,_incl._Aminoacyl-tRNA_editing_domain,_and_EamA_domain


id: CL:2798
description: Mixed, incl. EamA domain, and Polysaccharide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2798_Mixed,_incl._EamA_domain,_and_Polysaccharide_biosynthetic_process


id: CL:2800
description: Mixed, incl. Abi-like protein, and Transposase sub-family
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2800_Mixed,_incl._Abi-like_protein,_and_Transposase_sub-family


id: CL:2820
description: Mixed, incl. Amine metabolic process, and Glutathione biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2820_Mixed,_incl._Amine_metabolic_process,_and_Glutathione_biosynthesis


id: CL:2836
description: Mixed, incl. DNA methylase, N-6 adenine-specific, conserved site, and Cupredoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2836_Mixed,_incl._DNA_methylase,_N-6_adenine-specific,_conserved_site,_and_Cupredoxin


id: CL:2838
description: Mixed, incl. Cupredoxin, and B3/4 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2838_Mixed,_incl._Cupredoxin,_and_B3/4_domain


id: CL:2861
description: Mixed, incl. Enolase C-terminal domain-like, and Abi-like protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2861_Mixed,_incl._Enolase_C-terminal_domain-like,_and_Abi-like_protein


id: CL:2862
description: Mixed, incl. Enolase C-terminal domain-like, and LysR, substrate-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2862_Mixed,_incl._Enolase_C-terminal_domain-like,_and_LysR,_substrate-binding


id: CL:2877
description: Mixed, incl. Abi-like protein, and Enoyl-(Acyl carrier protein) reductase
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2877_Mixed,_incl._Abi-like_protein,_and_Enoyl-(Acyl_carrier_protein)_reductase


id: CL:2888
description: Mixed, incl. Integral component of membrane, and Transposase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2888_Mixed,_incl._Integral_component_of_membrane,_and_Transposase_activity


id: CL:2889
description: Mixed, incl. Integral component of membrane, and Transposase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2889_Mixed,_incl._Integral_component_of_membrane,_and_Transposase_activity


id: CL:2890
description: Mixed, incl. Glycerolipid metabolism, and Transposase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2890_Mixed,_incl._Glycerolipid_metabolism,_and_Transposase_activity


id: CL:2891
description: Mostly uncharacterized, incl. Transposase activity, and Beta-lactamase-related
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2891_Mostly_uncharacterized,_incl._Transposase_activity,_and_Beta-lactamase-related


id: CL:2892
description: Mixed, incl. Transposase activity, and Beta-lactamase-related
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2892_Mixed,_incl._Transposase_activity,_and_Beta-lactamase-related


id: CL:2894
description: Mixed, incl. Sulfuric ester hydrolase activity, and Toxin-antitoxin complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2894_Mixed,_incl._Sulfuric_ester_hydrolase_activity,_and_Toxin-antitoxin_complex


id: CL:2913
description: Mixed, incl. Beta-lactamase-related, and MarR-type HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2913_Mixed,_incl._Beta-lactamase-related,_and_MarR-type_HTH_domain


id: CL:2929
description: Mixed, incl. Sigma-70, region 4, and Pfam phage integrase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2929_Mixed,_incl._Sigma-70,_region_4,_and_Pfam_phage_integrase_family


id: CL:2931
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2931_Mixed,_incl._Helix-turn-helix_XRE-family_like_proteins,_and_Cationic_antimicrobial_peptide_(CAMP)_resistance

description:
  Mixed, incl. Helix-turn-helix XRE-family like proteins, and Cationic antimicrobial peptide (CAMP) resistance


id: CL:2948
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2948_Mixed,_incl._Alpha/beta_hydrolase_of_unknown_function_(DUF915),_and_Unsaturated_fatty_acid_metabolic_process

description:
  Mixed, incl. Alpha/beta hydrolase of unknown function (DUF915), and Unsaturated fatty acid metabolic process


id: CL:2949
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2949_Mixed,_incl._Alpha/beta_hydrolase_of_unknown_function_(DUF915),_and_Unsaturated_fatty_acid_metabolic_process

description:
  Mixed, incl. Alpha/beta hydrolase of unknown function (DUF915), and Unsaturated fatty acid metabolic process


id: CL:2951
description: Alpha/beta hydrolase of unknown function (DUF915)
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2951_Alpha/beta_hydrolase_of_unknown_function_(DUF915)


id: CL:2972
description: Mixed, incl. Response to pH, and Bile acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2972_Mixed,_incl._Response_to_pH,_and_Bile_acid_metabolic_process


id: CL:2987
description: Mixed, incl. Amino acid/polyamine transporter I, and Recombination-promoting nuclease RpnA
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2987_Mixed,_incl._Amino_acid/polyamine_transporter_I,_and_Recombination-promoting_nuclease_RpnA


id: CL:2988
description: Mixed, incl. Recombination-promoting nuclease RpnA, and External encapsulating structure
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2988_Mixed,_incl._Recombination-promoting_nuclease_RpnA,_and_External_encapsulating_structure


id: CL:2990
description: Mixed, incl. Recombination-promoting nuclease RpnA, and Monobactam biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2990_Mixed,_incl._Recombination-promoting_nuclease_RpnA,_and_Monobactam_biosynthesis


id: CL:2992
description: Recombination-promoting nuclease RpnA, and Monobactam biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:2992_Recombination-promoting_nuclease_RpnA,_and_Monobactam_biosynthesis


id: CL:3010
description: Mixed, incl. L,D-transpeptidase catalytic domain, and Peptidase, metallopeptidase
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:3010_Mixed,_incl._L,D-transpeptidase_catalytic_domain,_and_Peptidase,_metallopeptidase


id: CL:3026
description: Base-excision repair, and Peptidase, metallopeptidase
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:3026_Base-excision_repair,_and_Peptidase,_metallopeptidase


id: CL:3035
description: Mixed, incl. Amino acid/polyamine transporter I, and Autophagy-related protein 22-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:3035_Mixed,_incl._Amino_acid/polyamine_transporter_I,_and_Autophagy-related_protein_22-like


id: CL:3036
description: Amino acid/polyamine transporter I, and Hexosyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:3036_Amino_acid/polyamine_transporter_I,_and_Hexosyltransferase_activity


id: CL:3038
description: Amino acid/polyamine transporter I, and 1,4-alpha-oligoglucan phosphorylase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:3038_Amino_acid/polyamine_transporter_I,_and_1,4-alpha-oligoglucan_phosphorylase_activity


id: CL:3057
description: Autophagy-related protein 22-like, and Type I phosphodiesterase / nucleotide pyrophosphatase
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:3057_Autophagy-related_protein_22-like,_and_Type_I_phosphodiesterase_/_nucleotide_pyrophosphatase


id: CL:3066
description: Mixed, incl. Cell death, and LytTR DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:3066_Mixed,_incl._Cell_death,_and_LytTR_DNA-binding_domain


id: CL:3067
description: Mixed, incl. Cell death, and LytTR DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:3067_Mixed,_incl._Cell_death,_and_LytTR_DNA-binding_domain


id: CL:3068
description: Cell death, and LytTR DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:3068_Cell_death,_and_LytTR_DNA-binding_domain


id: CL:3079
description: Alkaline shock protein Asp23, and Transmembrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:3079_Alkaline_shock_protein_Asp23,_and_Transmembrane


id: CL:3089
description: Transposase activity, and TTHA1013/TTHA0281-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:3089_Transposase_activity,_and_TTHA1013/TTHA0281-like


id: CL:3103
description: Mixed, incl. Transcription regulator HTH, LysR, and Fluoride transmembrane transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:3103_Mixed,_incl._Transcription_regulator_HTH,_LysR,_and_Fluoride_transmembrane_transport


id: CL:3104
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:3104_Mixed,_incl._Transcription_regulator_HTH,_LysR,_and_Transcriptional_regulator_TetR,_C-terminal,_Firmicutes_type

description:
  Mixed, incl. Transcription regulator HTH, LysR, and Transcriptional regulator TetR, C-terminal, Firmicutes type


id: CL:3106
description: Transcription regulator HTH, LysR, and Amidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:3106_Transcription_regulator_HTH,_LysR,_and_Amidase_activity


id: CL:3129
description: Mixed, incl. Fluoride transmembrane transport, and Vicinal oxygen chelate (VOC) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:3129_Mixed,_incl._Fluoride_transmembrane_transport,_and_Vicinal_oxygen_chelate_(VOC)_domain


id: CL:3144
description: Mixed, incl. Major facilitator superfamily domain, and Citrate transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:3144_Mixed,_incl._Major_facilitator_superfamily_domain,_and_Citrate_transporter


id: CL:3145
description: Mixed, incl. Major facilitator superfamily, and Polyphosphate kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:3145_Mixed,_incl._Major_facilitator_superfamily,_and_Polyphosphate_kinase_activity


id: CL:3146
description: Mixed, incl. Tetracycline resistance protein TetA/multidrug resistance protein MdtG, and Cupredoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:3146_Mixed,_incl._Tetracycline_resistance_protein_TetA/multidrug_resistance_protein_MdtG,_and_Cupredoxin


id: CL:3148
description: Mixed, incl. HTH-like domain, and Citrate transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:3148_Mixed,_incl._HTH-like_domain,_and_Citrate_transporter


id: CL:3163
description: Mixed, incl. Cupredoxin, and Nitrogen metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:3163_Mixed,_incl._Cupredoxin,_and_Nitrogen_metabolism


id: CL:3175
description: Mixed, incl. Sugar phosphate transporter, and Zinc-ribbon domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:3175_Mixed,_incl._Sugar_phosphate_transporter,_and_Zinc-ribbon_domain


id: CL:3176
description: Sugar phosphate transporter, and Phosphoesterase MJ0912
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:3176_Sugar_phosphate_transporter,_and_Phosphoesterase_MJ0912


id: CL:3185
description: Mixed, incl. Zinc-ribbon domain, and Sugar transporter, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:3185_Mixed,_incl._Zinc-ribbon_domain,_and_Sugar_transporter,_conserved_site


id: CL:3194
description: Mixed, incl. Major facilitator superfamily domain, and DNA N-glycosylase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:3194_Mixed,_incl._Major_facilitator_superfamily_domain,_and_DNA_N-glycosylase_activity


id: CL:3196
description: Branched-chain amino acid transport, and Response of Mtb to phagocytosis
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:3196_Branched-chain_amino_acid_transport,_and_Response_of_Mtb_to_phagocytosis


id: CL:320
description: Mixed, incl. Prenyltransferase activity, and Ribosomal small subunit biogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:320_Mixed,_incl._Prenyltransferase_activity,_and_Ribosomal_small_subunit_biogenesis


id: CL:3208
description: Mixed, incl. Citrate transporter, and Threonine/Serine exporter, ThrE
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:3208_Mixed,_incl._Citrate_transporter,_and_Threonine/Serine_exporter,_ThrE


id: CL:321
description: Prenyltransferase activity, and Peptidase M50
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:321_Prenyltransferase_activity,_and_Peptidase_M50


id: CL:3219
description: Mixed, incl. DNA metabolic process, and Coiled coil
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:3219_Mixed,_incl._DNA_metabolic_process,_and_Coiled_coil


id: CL:3220
description: Mostly uncharacterized, incl. Coiled coil, and Quorum sensing
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:3220_Mostly_uncharacterized,_incl._Coiled_coil,_and_Quorum_sensing


id: CL:3221
description: Mixed, incl. Quorum sensing, and Coiled coil
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:3221_Mixed,_incl._Quorum_sensing,_and_Coiled_coil


id: CL:3222
description: Mostly uncharacterized, incl. Quorum sensing, and Glycosyl hydrolases family 25
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:3222_Mostly_uncharacterized,_incl._Quorum_sensing,_and_Glycosyl_hydrolases_family_25


id: CL:3224
description: Mostly uncharacterized, incl. Glycosyl hydrolases family 25, and Carbohydrate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:3224_Mostly_uncharacterized,_incl._Glycosyl_hydrolases_family_25,_and_Carbohydrate_transport


id: CL:3225
description: Mixed, incl. Glycosyl hydrolases family 25, and Carbohydrate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:3225_Mixed,_incl._Glycosyl_hydrolases_family_25,_and_Carbohydrate_transport


id: CL:3226
description: Mixed, incl. Carbohydrate transport, and Pectin lyase fold
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:3226_Mixed,_incl._Carbohydrate_transport,_and_Pectin_lyase_fold


id: CL:3228
description: Mixed, incl. Peptidase M23, and Pectin lyase fold
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:3228_Mixed,_incl._Peptidase_M23,_and_Pectin_lyase_fold


id: CL:3248
description: Mixed, incl. Extracellular space, and Phage holin, LL-H family
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:3248_Mixed,_incl._Extracellular_space,_and_Phage_holin,_LL-H_family


id: CL:3258
description: Mostly uncharacterized, incl. HNH nuclease, and Tape measure protein N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:3258_Mostly_uncharacterized,_incl._HNH_nuclease,_and_Tape_measure_protein_N-terminal


id: CL:3260
description: Mixed, incl. HNH nuclease, and Tape measure protein N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:3260_Mixed,_incl._HNH_nuclease,_and_Tape_measure_protein_N-terminal


id: CL:3296
description: Mixed, incl. LPXTG cell wall anchor motif, and Mub B2-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:3296_Mixed,_incl._LPXTG_cell_wall_anchor_motif,_and_Mub_B2-like_domain


id: CL:3298
description: Mixed, incl. LPXTG cell wall anchor motif, and Mub B2-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:3298_Mixed,_incl._LPXTG_cell_wall_anchor_motif,_and_Mub_B2-like_domain


id: CL:330
description: Ribosomal small subunit biogenesis, and tRNA pseudouridine synthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:330_Ribosomal_small_subunit_biogenesis,_and_tRNA_pseudouridine_synthesis


id: CL:3300
description: Mixed, incl. Mub B2-like domain, and LPXTG cell wall anchor motif
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:3300_Mixed,_incl._Mub_B2-like_domain,_and_LPXTG_cell_wall_anchor_motif


id: CL:3312
description: Mixed, incl. Extracellular space, and RNA polymerase sigma factor, region 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:3312_Mixed,_incl._Extracellular_space,_and_RNA_polymerase_sigma_factor,_region_2


id: CL:3331
description: Mostly uncharacterized, incl. Primosome complex, and Double-stranded DNA binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:3331_Mostly_uncharacterized,_incl._Primosome_complex,_and_Double-stranded_DNA_binding


id: CL:3333
description: Mostly uncharacterized, incl. Primosome complex, and Double-stranded DNA binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:3333_Mostly_uncharacterized,_incl._Primosome_complex,_and_Double-stranded_DNA_binding


id: CL:3334
description: Mostly uncharacterized, incl. Primosome complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:3334_Mostly_uncharacterized,_incl._Primosome_complex


id: CL:3345
description: Mixed, incl. Double-stranded DNA binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:3345_Mixed,_incl._Double-stranded_DNA_binding


id: CL:3362
description: Mostly uncharacterized, incl. Fibronectin type III, and Nucleus
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:3362_Mostly_uncharacterized,_incl._Fibronectin_type_III,_and_Nucleus


id: CL:3363
description: Mostly uncharacterized, incl. Fibronectin type III, and Host cell
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:3363_Mostly_uncharacterized,_incl._Fibronectin_type_III,_and_Host_cell


id: CL:3364
description: Mostly uncharacterized, incl. Fibronectin type III, and Host cell
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:3364_Mostly_uncharacterized,_incl._Fibronectin_type_III,_and_Host_cell


id: CL:3366
description: Mixed, incl. Host cell, and NlpC/P60 family
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:3366_Mixed,_incl._Host_cell,_and_NlpC/P60_family


id: CL:3368
description: Mixed, incl. Host cell, and Phage terminase, small subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:3368_Mixed,_incl._Host_cell,_and_Phage_terminase,_small_subunit


id: CL:3390
description: Mixed, incl. Fibronectin type III, and Phage holin, LL-H family
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:3390_Mixed,_incl._Fibronectin_type_III,_and_Phage_holin,_LL-H_family


id: CL:3393
description: Mixed, incl. Fibronectin type III, and Baseplate upper protein, immunoglobulin like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:3393_Mixed,_incl._Fibronectin_type_III,_and_Baseplate_upper_protein,_immunoglobulin_like_domain


id: CL:340
description: Mixed, incl. tRNA (guanine) methyltransferase activity, and Ribosome binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:340_Mixed,_incl._tRNA_(guanine)_methyltransferase_activity,_and_Ribosome_binding


id: CL:3424
description: Mostly uncharacterized, incl. Nucleus, and VRR-NUC domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:3424_Mostly_uncharacterized,_incl._Nucleus,_and_VRR-NUC_domain


id: CL:3426
description: Mostly uncharacterized, incl. Methyltransferase type 11
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:3426_Mostly_uncharacterized,_incl._Methyltransferase_type_11


id: CL:3457
description: Mixed, incl. VRR-NUC domain, and D5 N terminal like
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:3457_Mixed,_incl._VRR-NUC_domain,_and_D5_N_terminal_like


id: CL:3477
description: Mixed, incl. DNA restriction-modification system, and Base excision repair
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:3477_Mixed,_incl._DNA_restriction-modification_system,_and_Base_excision_repair


id: CL:3479
description: Mixed, incl. DNA restriction-modification system, and Base excision repair
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:3479_Mixed,_incl._DNA_restriction-modification_system,_and_Base_excision_repair


id: CL:3480
description: Mixed, incl. DNA restriction-modification system, and Base excision repair
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:3480_Mixed,_incl._DNA_restriction-modification_system,_and_Base_excision_repair


id: CL:3482
description: Mixed, incl. Base excision repair, and HNH nuclease
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:3482_Mixed,_incl._Base_excision_repair,_and_HNH_nuclease


id: CL:3485
description: Mixed, incl. Base excision repair, and HNH nuclease
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:3485_Mixed,_incl._Base_excision_repair,_and_HNH_nuclease


id: CL:3487
description: Base excision repair, and 4-hydroxy-tetrahydrodipicolinate synthase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:3487_Base_excision_repair,_and_4-hydroxy-tetrahydrodipicolinate_synthase_activity


id: CL:3517
description: DNA restriction-modification system
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:3517_DNA_restriction-modification_system


id: CL:3519
description: Type I restriction modification DNA specificity domain, and SWI2/SNF2 ATPase
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:3519_Type_I_restriction_modification_DNA_specificity_domain,_and_SWI2/SNF2_ATPase


id: CL:3538
description: Mixed, incl. Flagellar assembly, and Core-binding (CB) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:3538_Mixed,_incl._Flagellar_assembly,_and_Core-binding_(CB)_domain


id: CL:355
description: Mixed, incl. DEAD/DEAH box helicase domain, and Pseudouridine synthase, RluC/RluD
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:355_Mixed,_incl._DEAD/DEAH_box_helicase_domain,_and_Pseudouridine_synthase,_RluC/RluD


id: CL:3561
description: Mixed, incl. AzlC protein, and HhH-GPD domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:3561_Mixed,_incl._AzlC_protein,_and_HhH-GPD_domain


id: CL:3574
description: Mixed, incl. Type II methyltransferase M.EcoRI-like, and Na+/H+ antiporter family
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:3574_Mixed,_incl._Type_II_methyltransferase_M.EcoRI-like,_and_Na+/H+_antiporter_family


id: CL:358
description: Pseudouridine synthase, RluC/RluD, and Rotamase
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:358_Pseudouridine_synthase,_RluC/RluD,_and_Rotamase


id: CL:3594
description: DNA integration, and Transposition
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:3594_DNA_integration,_and_Transposition


id: CL:3618
description: RNA-directed DNA polymerase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:3618_RNA-directed_DNA_polymerase_activity


id: CL:373
description: RNA helicase activity, and NUDIX domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:373_RNA_helicase_activity,_and_NUDIX_domain


id: CL:390
description: Mixed, incl. Response to heat, and UvrB, interaction domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:390_Mixed,_incl._Response_to_heat,_and_UvrB,_interaction_domain


id: CL:407
description: RelA/SpoT, and CTP metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:407_RelA/SpoT,_and_CTP_metabolic_process


id: CL:425
description: Mixed, incl. Chaperone, and Redox-active center
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:425_Mixed,_incl._Chaperone,_and_Redox-active_center


id: CL:427
description: Chaperone, and Redox-active center
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:427_Chaperone,_and_Redox-active_center


id: CL:430
description: Protein folding, and Clp, repeat (R) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:430_Protein_folding,_and_Clp,_repeat_(R)_domain


id: CL:458
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:458_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_NAD(P)_as_acceptor,_and_Thioredoxin_domain

description:
  Oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor, and Thioredoxin domain


id: CL:477
description: Phosphoprotein phosphatase activity, and TPR repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:477_Phosphoprotein_phosphatase_activity,_and_TPR_repeat


id: CL:488
description: Mixed, incl. Ribonuclease III domain, and PIN-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:488_Mixed,_incl._Ribonuclease_III_domain,_and_PIN-like_domain_superfamily


id: CL:501
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:501_Mixed,_incl._glutaminyl-tRNA_synthase_(glutamine-hydrolyzing)_activity,_and_Aspartyl/Asparaginyl-tRNA_synthetase,_class_IIb

description:
  Mixed, incl. glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity, and Aspartyl/Asparaginyl-tRNA synthetase, class IIb


id: CL:503
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:503_glutaminyl-tRNA_synthase_(glutamine-hydrolyzing)_activity,_and_Aspartyl/Asparaginyl-tRNA_synthetase,_class_IIb

description:
  glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity, and Aspartyl/Asparaginyl-tRNA synthetase, class IIb


id: CL:526
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:526_Mixed,_incl._Chromosome_segregation,_and_Circularly_permuted_(CP)-type_guanine_nucleotide-binding_(G)_domain

description:
  Mixed, incl. Chromosome segregation, and Circularly permuted (CP)-type guanine nucleotide-binding (G) domain


id: CL:528
description: Mixed, incl. DNA topoisomerase, type IIA-like domain superfamily, and Alditol metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:528_Mixed,_incl._DNA_topoisomerase,_type_IIA-like_domain_superfamily,_and_Alditol_metabolic_process


id: CL:530
description: Mixed, incl. Alditol metabolic process, and Thiamine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:530_Mixed,_incl._Alditol_metabolic_process,_and_Thiamine_metabolism


id: CL:531
description: Mixed, incl. NusB family, and PASTA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:531_Mixed,_incl._NusB_family,_and_PASTA_domain


id: CL:542
description: Alditol metabolic process, and Enzyme regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:542_Alditol_metabolic_process,_and_Enzyme_regulator_activity


id: CL:563
description: Mixed, incl. SGNH hydrolase-type esterase domain, and RNA-DNA hybrid ribonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:563_Mixed,_incl._SGNH_hydrolase-type_esterase_domain,_and_RNA-DNA_hybrid_ribonuclease_activity


id: CL:575
description: Mixed, incl. glycyl-tRNA aminoacylation, and ARFGAP/RecO-like zinc finger
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:575_Mixed,_incl._glycyl-tRNA_aminoacylation,_and_ARFGAP/RecO-like_zinc_finger


id: CL:578
description: Mixed, incl. K Homology domain, type 2, and ARFGAP/RecO-like zinc finger
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:578_Mixed,_incl._K_Homology_domain,_type_2,_and_ARFGAP/RecO-like_zinc_finger


id: CL:594
description: Mixed, incl. Mismatch repair, and SOS response
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:594_Mixed,_incl._Mismatch_repair,_and_SOS_response


id: CL:595
description: Mixed, incl. Mismatch repair, and SOS response
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:595_Mixed,_incl._Mismatch_repair,_and_SOS_response


id: CL:596
description: Mixed, incl. Mismatch repair, and DNA-templated DNA replication
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:596_Mixed,_incl._Mismatch_repair,_and_DNA-templated_DNA_replication


id: CL:597
description: DNA replication, and Ribonuclease H superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:597_DNA_replication,_and_Ribonuclease_H_superfamily


id: CL:598
description: DNA replication, and Exonuclease, RNase T/DNA polymerase III
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:598_DNA_replication,_and_Exonuclease,_RNase_T/DNA_polymerase_III


id: CL:599
description: DNA replication, and DNA-templated DNA replication
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:599_DNA_replication,_and_DNA-templated_DNA_replication


id: CL:600
description: DNA replication, and Primosome complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:600_DNA_replication,_and_Primosome_complex


id: CL:602
description: DNA-directed DNA polymerase activity, and Exonuclease, RNase T/DNA polymerase III
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:602_DNA-directed_DNA_polymerase_activity,_and_Exonuclease,_RNase_T/DNA_polymerase_III


id: CL:605
description: DNA polymerase complex, and Helix-hairpin-helix motif
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:605_DNA_polymerase_complex,_and_Helix-hairpin-helix_motif


id: CL:62
description: Mixed, incl. Translation, and Protein localization
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:62_Mixed,_incl._Translation,_and_Protein_localization


id: CL:626
description: Primosome complex, and ATP-cone domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:626_Primosome_complex,_and_ATP-cone_domain


id: CL:63
description: Mixed, incl. Translation, and Protein localization
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:63_Mixed,_incl._Translation,_and_Protein_localization


id: CL:637
description: DNA topoisomerase, type IIA-like domain superfamily, and DNA replication initiation
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:637_DNA_topoisomerase,_type_IIA-like_domain_superfamily,_and_DNA_replication_initiation


id: CL:646
description: LexA-like, and Enzyme regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:646_LexA-like,_and_Enzyme_regulator_activity


id: CL:65
description: Translation, and Protein localization
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:65_Translation,_and_Protein_localization


id: CL:656
description: Mixed, incl. UVR domain superfamily, and tRNA 3-trailer cleavage
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:656_Mixed,_incl._UVR_domain_superfamily,_and_tRNA_3-trailer_cleavage


id: CL:666
description: Mixed, incl. Mismatch repair, and Holliday junction helicase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:666_Mixed,_incl._Mismatch_repair,_and_Holliday_junction_helicase_complex


id: CL:668
description: Mismatch repair, and Holliday junction helicase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:668_Mismatch_repair,_and_Holliday_junction_helicase_complex


id: CL:67
description: Translation, and Protein localization
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:67_Translation,_and_Protein_localization


id: CL:68
description: Translation, and Protein transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:68_Translation,_and_Protein_transport


id: CL:680
description: Mixed, incl. RNA capping, and DNA mismatch repair MutS family
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:680_Mixed,_incl._RNA_capping,_and_DNA_mismatch_repair_MutS_family


id: CL:689
description: Excinuclease repair complex, and Positive regulation of RNA metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:689_Excinuclease_repair_complex,_and_Positive_regulation_of_RNA_metabolic_process


id: CL:69
description: Translation, and Protein transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:69_Translation,_and_Protein_transport


id: CL:70
description: Ribonucleoprotein, and Protein transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:70_Ribonucleoprotein,_and_Protein_transport


id: CL:704
description: DNA catabolic process, and Host cell
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:704_DNA_catabolic_process,_and_Host_cell


id: CL:71
description: Ribonucleoprotein, and Protein transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:71_Ribonucleoprotein,_and_Protein_transport


id: CL:717
description: Nucleoside monophosphate biosynthetic process, and Purine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:717_Nucleoside_monophosphate_biosynthetic_process,_and_Purine_metabolism


id: CL:718
description: Mixed, incl. Ribonucleoside monophosphate metabolic process, and Lysin motif
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:718_Mixed,_incl._Ribonucleoside_monophosphate_metabolic_process,_and_Lysin_motif


id: CL:719
description: Ribonucleoside monophosphate metabolic process, and Nucleobase transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:719_Ribonucleoside_monophosphate_metabolic_process,_and_Nucleobase_transport


id: CL:720
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:720_Purine_nucleoside_monophosphate_metabolic_process,_and_Folic_acid-containing_compound_metabolic_process

description:
  Purine nucleoside monophosphate metabolic process, and Folic acid-containing compound metabolic process


id: CL:721
description: Mixed, incl. GMP metabolic process, and Purine nucleobase metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:721_Mixed,_incl._GMP_metabolic_process,_and_Purine_nucleobase_metabolic_process


id: CL:723
description: GMP metabolic process, and Purine nucleobase metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:723_GMP_metabolic_process,_and_Purine_nucleobase_metabolic_process


id: CL:725
description: Mixed, incl. Purine salvage, and GMP reductase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:725_Mixed,_incl._Purine_salvage,_and_GMP_reductase_complex


id: CL:73
description: Ribosome, and Regulation of translation
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:73_Ribosome,_and_Regulation_of_translation


id: CL:751
description: Mixed, incl. Ham1 family, and GMP synthase, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:751_Mixed,_incl._Ham1_family,_and_GMP_synthase,_C-terminal


id: CL:760
description: Purine biosynthesis, and Folic acid-containing compound metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:760_Purine_biosynthesis,_and_Folic_acid-containing_compound_metabolic_process


id: CL:764
description: De novo IMP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:764_De_novo_IMP_biosynthetic_process


id: CL:767
description: De novo IMP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:767_De_novo_IMP_biosynthetic_process


id: CL:77
description: Ribosome, and Regulation of translation
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:77_Ribosome,_and_Regulation_of_translation


id: CL:78
description: Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:78_Ribosome,_and_Translation_regulator_activity


id: CL:788
description: Folic acid-containing compound metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:788_Folic_acid-containing_compound_metabolic_process


id: CL:799
description: UMP metabolic process, and Nucleobase transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:799_UMP_metabolic_process,_and_Nucleobase_transport


id: CL:802
description: De novo UMP biosynthetic process, and Xanthine/uracil permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:802_De_novo_UMP_biosynthetic_process,_and_Xanthine/uracil_permease


id: CL:805
description: De novo UMP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:805_De_novo_UMP_biosynthetic_process


id: CL:848
description: Mixed, incl. RF-1 domain, and Protein alkylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:848_Mixed,_incl._RF-1_domain,_and_Protein_alkylation


id: CL:865
description: Nicotinate and nicotinamide metabolism, and RNA capping
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:865_Nicotinate_and_nicotinamide_metabolism,_and_RNA_capping


id: CL:866
description: Mixed, incl. Pyridine nucleotide biosynthetic process, and Ribosome assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:866_Mixed,_incl._Pyridine_nucleotide_biosynthetic_process,_and_Ribosome_assembly


id: CL:870
description: Ribosome assembly, and NAD biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:870_Ribosome_assembly,_and_NAD_biosynthetic_process


id: CL:885
description: Pyridine nucleotide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:885_Pyridine_nucleotide_biosynthetic_process


id: CL:91
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:91_Structural_constituent_of_ribosome


id: CL:915
description: Mixed, incl. Regulation of cell shape, and Reproduction
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:915_Mixed,_incl._Regulation_of_cell_shape,_and_Reproduction


id: CL:917
description: Regulation of cell shape, and Reproduction
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:917_Regulation_of_cell_shape,_and_Reproduction


id: CL:918
description: Cell cycle, and Carboxypeptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:918_Cell_cycle,_and_Carboxypeptidase_activity


id: CL:919
description: Peptidoglycan synthesis, and Carboxypeptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:919_Peptidoglycan_synthesis,_and_Carboxypeptidase_activity


id: CL:922
description: Mur ligase, C-terminal, and Lipid modification
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:922_Mur_ligase,_C-terminal,_and_Lipid_modification


id: CL:950
description: Reproduction, and Identical protein binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:950_Reproduction,_and_Identical_protein_binding


id: CL:952
description: Reproduction, and Nucleotide-binding alpha-beta plait domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:952_Reproduction,_and_Nucleotide-binding_alpha-beta_plait_domain_superfamily


id: CL:962
description: Cell division site, and rRNA base methylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:962_Cell_division_site,_and_rRNA_base_methylation


id: CL:971
description: Cell shape determining protein MreB, and Regulation of cell shape
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:971_Cell_shape_determining_protein_MreB,_and_Regulation_of_cell_shape


id: CL:990
description: Mixed, incl. Cell cycle protein, and Elongation Factor G, domain II
name:
  Local Network Cluster (STRING).STRING_v12.0_1423814_STRINGid_CL:990_Mixed,_incl._Cell_cycle_protein,_and_Elongation_Factor_G,_domain_II


id: GO:0000716
description: Transcription-coupled nucleotide-excision repair, DNA damage recognition
memo: https://amigo.geneontology.org/amigo/term/GO:0000716
golevel: 7
name:
  GOBP.STRING_v12.0_1423814_STRINGid_GO:0000716_Transcription-coupled_nucleotide-excision_repair,_DNA_damage_recognition


id: GO:0000724
description: Double-strand break repair via homologous recombination
memo: https://amigo.geneontology.org/amigo/term/GO:0000724
golevel: 7
name:
  GOBP.STRING_v12.0_1423814_STRINGid_GO:0000724_Double-strand_break_repair_via_homologous_recombination


id: GO:0001073
description: Transcription antitermination factor activity, DNA binding
memo: https://amigo.geneontology.org/amigo/term/GO:0001073
golevel: 2
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0001073_Transcription_antitermination_factor_activity,_DNA_binding


id: GO:0003871
description: 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003871
golevel: 6
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0003871_5-methyltetrahydropteroyltriglutamate-homocysteine_S-methyltransferase_activity


id: GO:0003906
description: DNA-(apurinic or apyrimidinic site) endonuclease activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003906
golevel: 6
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0003906_DNA-(apurinic_or_apyrimidinic_site)_endonuclease_activity


id: GO:0003917
description: DNA topoisomerase type I (single strand cut, ATP-independent) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003917
golevel: 5
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0003917_DNA_topoisomerase_type_I_(single_strand_cut,_ATP-independent)_activity


id: GO:0003918
description: DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003918
golevel: 3
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0003918_DNA_topoisomerase_type_II_(double_strand_cut,_ATP-hydrolyzing)_activity


id: GO:0003961
description: O-acetylhomoserine aminocarboxypropyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003961
golevel: 4
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0003961_O-acetylhomoserine_aminocarboxypropyltransferase_activity


id: GO:0004018
description: N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004018
golevel: 5
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0004018_N6-(1,2-dicarboxyethyl)AMP_AMP-lyase_(fumarate-forming)_activity


id: GO:0004088
description: Carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004088
golevel: 5
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0004088_Carbamoyl-phosphate_synthase_(glutamine-hydrolyzing)_activity


id: GO:0004316
description: 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004316
golevel: 5
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0004316_3-oxoacyl-[acyl-carrier-protein]_reductase_(NADPH)_activity


id: GO:0004317
description: 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004317
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0004317_3-hydroxypalmitoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0004318
description: Enoyl-[acyl-carrier-protein] reductase (NADH) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004318
golevel: 6
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0004318_Enoyl-[acyl-carrier-protein]_reductase_(NADH)_activity


id: GO:0004360
description: glutamine-fructose-6-phosphate transaminase (isomerizing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004360
golevel: 6
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0004360_glutamine-fructose-6-phosphate_transaminase_(isomerizing)_activity


id: GO:0004471
description: Malate dehydrogenase (decarboxylating) (NAD+) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004471
golevel: 5
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0004471_Malate_dehydrogenase_(decarboxylating)_(NAD+)_activity


id: GO:0004486
description: Methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004486
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0004486_Methylenetetrahydrofolate_dehydrogenase_[NAD(P)+]_activity


id: GO:0004488
description: Methylenetetrahydrofolate dehydrogenase (NADP+) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004488
golevel: 5
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0004488_Methylenetetrahydrofolate_dehydrogenase_(NADP+)_activity


id: GO:0004489
description: Methylenetetrahydrofolate reductase (NAD(P)H) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004489
golevel: 5
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0004489_Methylenetetrahydrofolate_reductase_(NAD(P)H)_activity


id: GO:0004514
description: Nicotinate-nucleotide diphosphorylase (carboxylating) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004514
golevel: 5
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0004514_Nicotinate-nucleotide_diphosphorylase_(carboxylating)_activity


id: GO:0004616
description: Phosphogluconate dehydrogenase (decarboxylating) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004616
golevel: 5
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0004616_Phosphogluconate_dehydrogenase_(decarboxylating)_activity


id: GO:0004639
description: Phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004639
golevel: 5
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0004639_Phosphoribosylaminoimidazolesuccinocarboxamide_synthase_activity


id: GO:0004641
description: Phosphoribosylformylglycinamidine cyclo-ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004641
golevel: 5
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0004641_Phosphoribosylformylglycinamidine_cyclo-ligase_activity


id: GO:0004643
description: Phosphoribosylaminoimidazolecarboxamide formyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004643
golevel: 5
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0004643_Phosphoribosylaminoimidazolecarboxamide_formyltransferase_activity


id: GO:0004715
description: Non-membrane spanning protein tyrosine kinase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004715
golevel: 5
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0004715_Non-membrane_spanning_protein_tyrosine_kinase_activity


id: GO:0004748
description: Ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0004748
golevel: 6
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0004748_Ribonucleoside-diphosphate_reductase_activity,_thioredoxin_disulfide_as_acceptor


id: GO:0005315
description: Inorganic phosphate transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0005315
golevel: 5
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0005315_Inorganic_phosphate_transmembrane_transporter_activity


id: GO:0005350
description: Pyrimidine nucleobase transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0005350
golevel: 4
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0005350_Pyrimidine_nucleobase_transmembrane_transporter_activity


id: GO:0006614
description: SRP-dependent cotranslational protein targeting to membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0006614
golevel: 6
name:
  GOBP.STRING_v12.0_1423814_STRINGid_GO:0006614_SRP-dependent_cotranslational_protein_targeting_to_membrane


id: GO:0008108
description: UDP-glucose:hexose-1-phosphate uridylyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008108
golevel: 6
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0008108_UDP-glucose:hexose-1-phosphate_uridylyltransferase_activity


id: GO:0008444
description: CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008444
golevel: 6
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0008444_CDP-diacylglycerol-glycerol-3-phosphate_3-phosphatidyltransferase_activity


id: GO:0008534
description: Oxidized purine nucleobase lesion DNA N-glycosylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008534
golevel: 6
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0008534_Oxidized_purine_nucleobase_lesion_DNA_N-glycosylase_activity


id: GO:0008659
description: (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008659
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0008659_(3R)-hydroxymyristoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0008693
description: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008693
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0008693_3-hydroxydecanoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0008703
description: 5-amino-6-(5-phosphoribosylamino)uracil reductase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008703
golevel: 5
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0008703_5-amino-6-(5-phosphoribosylamino)uracil_reductase_activity


id: GO:0008757
description: S-adenosylmethionine-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008757
golevel: 5
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0008757_S-adenosylmethionine-dependent_methyltransferase_activity


id: GO:0008760
description: UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008760
golevel: 4
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0008760_UDP-N-acetylglucosamine_1-carboxyvinyltransferase_activity


id: GO:0008764
description: UDP-N-acetylmuramoylalanine-D-glutamate ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008764
golevel: 5
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0008764_UDP-N-acetylmuramoylalanine-D-glutamate_ligase_activity


id: GO:0008766
description: UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008766
golevel: 5
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0008766_UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine_ligase_activity


id: GO:0008825
description: Cyclopropane-fatty-acyl-phospholipid synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008825
golevel: 6
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0008825_Cyclopropane-fatty-acyl-phospholipid_synthase_activity


id: GO:0008835
description: Diaminohydroxyphosphoribosylaminopyrimidine deaminase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008835
golevel: 5
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0008835_Diaminohydroxyphosphoribosylaminopyrimidine_deaminase_activity


id: GO:0008961
description: Phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008961
golevel: 3
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0008961_Phosphatidylglycerol-prolipoprotein_diacylglyceryl_transferase_activity


id: GO:0008963
description: phospho-N-acetylmuramoyl-pentapeptide-transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008963
golevel: 5
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0008963_phospho-N-acetylmuramoyl-pentapeptide-transferase_activity


id: GO:0008965
description: Phosphoenolpyruvate-protein phosphotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008965
golevel: 5
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0008965_Phosphoenolpyruvate-protein_phosphotransferase_activity


id: GO:0008982
description: protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008982
golevel: 4
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0008982_protein-N(PI)-phosphohistidine-sugar_phosphotransferase_activity


id: GO:0009007
description: Site-specific DNA-methyltransferase (adenine-specific) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0009007
golevel: 5
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0009007_Site-specific_DNA-methyltransferase_(adenine-specific)_activity


id: GO:0009130
description: Pyrimidine nucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009130
golevel: 7
name:
  GOBP.STRING_v12.0_1423814_STRINGid_GO:0009130_Pyrimidine_nucleoside_monophosphate_biosynthetic_process


id: GO:0009139
description: Pyrimidine nucleoside diphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009139
golevel: 7
name:
  GOBP.STRING_v12.0_1423814_STRINGid_GO:0009139_Pyrimidine_nucleoside_diphosphate_biosynthetic_process


id: GO:0009148
description: Pyrimidine nucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009148
golevel: 7
name:
  GOBP.STRING_v12.0_1423814_STRINGid_GO:0009148_Pyrimidine_nucleoside_triphosphate_biosynthetic_process


id: GO:0009157
description: Deoxyribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009157
golevel: 7
name:
  GOBP.STRING_v12.0_1423814_STRINGid_GO:0009157_Deoxyribonucleoside_monophosphate_biosynthetic_process


id: GO:0009168
description: Purine ribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009168
golevel: 8
name:
  GOBP.STRING_v12.0_1423814_STRINGid_GO:0009168_Purine_ribonucleoside_monophosphate_biosynthetic_process


id: GO:0009173
description: Pyrimidine ribonucleoside monophosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009173
golevel: 8
name:
  GOBP.STRING_v12.0_1423814_STRINGid_GO:0009173_Pyrimidine_ribonucleoside_monophosphate_metabolic_process


id: GO:0009174
description: Pyrimidine ribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009174
golevel: 8
name:
  GOBP.STRING_v12.0_1423814_STRINGid_GO:0009174_Pyrimidine_ribonucleoside_monophosphate_biosynthetic_process


id: GO:0009176
description: Pyrimidine deoxyribonucleoside monophosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009176
golevel: 8
name:
  GOBP.STRING_v12.0_1423814_STRINGid_GO:0009176_Pyrimidine_deoxyribonucleoside_monophosphate_metabolic_process


id: GO:0009177
description: Pyrimidine deoxyribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009177
golevel: 8
name:
  GOBP.STRING_v12.0_1423814_STRINGid_GO:0009177_Pyrimidine_deoxyribonucleoside_monophosphate_biosynthetic_process


id: GO:0009196
description: Pyrimidine deoxyribonucleoside diphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009196
golevel: 8
name:
  GOBP.STRING_v12.0_1423814_STRINGid_GO:0009196_Pyrimidine_deoxyribonucleoside_diphosphate_metabolic_process


id: GO:0009197
description: Pyrimidine deoxyribonucleoside diphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009197
golevel: 8
name:
  GOBP.STRING_v12.0_1423814_STRINGid_GO:0009197_Pyrimidine_deoxyribonucleoside_diphosphate_biosynthetic_process


id: GO:0009206
description: Purine ribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009206
golevel: 8
name:
  GOBP.STRING_v12.0_1423814_STRINGid_GO:0009206_Purine_ribonucleoside_triphosphate_biosynthetic_process


id: GO:0009208
description: Pyrimidine ribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009208
golevel: 8
name:
  GOBP.STRING_v12.0_1423814_STRINGid_GO:0009208_Pyrimidine_ribonucleoside_triphosphate_metabolic_process


id: GO:0009209
description: Pyrimidine ribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009209
golevel: 8
name:
  GOBP.STRING_v12.0_1423814_STRINGid_GO:0009209_Pyrimidine_ribonucleoside_triphosphate_biosynthetic_process


id: GO:0009211
description: Pyrimidine deoxyribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009211
golevel: 8
name:
  GOBP.STRING_v12.0_1423814_STRINGid_GO:0009211_Pyrimidine_deoxyribonucleoside_triphosphate_metabolic_process


id: GO:0009212
description: Pyrimidine deoxyribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009212
golevel: 8
name:
  GOBP.STRING_v12.0_1423814_STRINGid_GO:0009212_Pyrimidine_deoxyribonucleoside_triphosphate_biosynthetic_process


id: GO:0009213
description: Pyrimidine deoxyribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009213
golevel: 8
name:
  GOBP.STRING_v12.0_1423814_STRINGid_GO:0009213_Pyrimidine_deoxyribonucleoside_triphosphate_catabolic_process


id: GO:0009215
description: Purine deoxyribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009215
golevel: 8
name:
  GOBP.STRING_v12.0_1423814_STRINGid_GO:0009215_Purine_deoxyribonucleoside_triphosphate_metabolic_process


id: GO:0009217
description: Purine deoxyribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009217
golevel: 8
name:
  GOBP.STRING_v12.0_1423814_STRINGid_GO:0009217_Purine_deoxyribonucleoside_triphosphate_catabolic_process


id: GO:0009401
description: Phosphoenolpyruvate-dependent sugar phosphotransferase system
memo: https://amigo.geneontology.org/amigo/term/GO:0009401
golevel: 5
name:
  GOBP.STRING_v12.0_1423814_STRINGid_GO:0009401_Phosphoenolpyruvate-dependent_sugar_phosphotransferase_system


id: GO:0009678
description: Pyrophosphate hydrolysis-driven proton transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0009678
golevel: 5
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0009678_Pyrophosphate_hydrolysis-driven_proton_transmembrane_transporter_activity


id: GO:0010142
description: Farnesyl diphosphate biosynthetic process, mevalonate pathway
memo: https://amigo.geneontology.org/amigo/term/GO:0010142
golevel: 7
name:
  GOBP.STRING_v12.0_1423814_STRINGid_GO:0010142_Farnesyl_diphosphate_biosynthetic_process,_mevalonate_pathway


id: GO:0010557
description: Positive regulation of macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010557
golevel: 7
name:
  GOBP.STRING_v12.0_1423814_STRINGid_GO:0010557_Positive_regulation_of_macromolecule_biosynthetic_process


id: GO:0010558
description: Negative regulation of macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010558
golevel: 7
name:
  GOBP.STRING_v12.0_1423814_STRINGid_GO:0010558_Negative_regulation_of_macromolecule_biosynthetic_process


id: GO:0010604
description: Positive regulation of macromolecule metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010604
golevel: 6
name:
  GOBP.STRING_v12.0_1423814_STRINGid_GO:0010604_Positive_regulation_of_macromolecule_metabolic_process


id: GO:0010605
description: Negative regulation of macromolecule metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010605
golevel: 6
name:
  GOBP.STRING_v12.0_1423814_STRINGid_GO:0010605_Negative_regulation_of_macromolecule_metabolic_process


id: GO:0015318
description: Inorganic molecular entity transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015318
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0015318_Inorganic_molecular_entity_transmembrane_transporter_activity


id: GO:0015415
description: ATPase-coupled phosphate ion transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015415
golevel: 3
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0015415_ATPase-coupled_phosphate_ion_transmembrane_transporter_activity


id: GO:0015453
description: Oxidoreduction-driven active transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015453
golevel: 5
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0015453_Oxidoreduction-driven_active_transmembrane_transporter_activity


id: GO:0015658
description: Branched-chain amino acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015658
golevel: 4
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0015658_Branched-chain_amino_acid_transmembrane_transporter_activity


id: GO:0015932
description: Nucleobase-containing compound transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015932
golevel: 3
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0015932_Nucleobase-containing_compound_transmembrane_transporter_activity


id: GO:0016614
description: Oxidoreductase activity, acting on CH-OH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016614
golevel: 3
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0016614_Oxidoreductase_activity,_acting_on_CH-OH_group_of_donors


id: GO:0016616
description: Oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016616
golevel: 4
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0016616_Oxidoreductase_activity,_acting_on_the_CH-OH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016620
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016620
golevel: 4
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0016620_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016624
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016624
golevel: 4
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0016624_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_disulfide_as_acceptor


id: GO:0016627
description: Oxidoreductase activity, acting on the CH-CH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016627
golevel: 3
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0016627_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors


id: GO:0016628
description: Oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016628
golevel: 4
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0016628_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016635
memo: https://amigo.geneontology.org/amigo/term/GO:0016635
golevel: 4
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0016635_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_quinone_or_related_compound_as_acceptor

description:
  Oxidoreductase activity, acting on the CH-CH group of donors, quinone or related compound as acceptor


id: GO:0016645
description: Oxidoreductase activity, acting on the CH-NH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016645
golevel: 3
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0016645_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors


id: GO:0016646
description: Oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016646
golevel: 4
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0016646_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016655
description: Oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016655
golevel: 4
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0016655_Oxidoreductase_activity,_acting_on_NAD(P)H,_quinone_or_similar_compound_as_acceptor


id: GO:0016657
description: Oxidoreductase activity, acting on NAD(P)H, nitrogenous group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016657
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0016657_Oxidoreductase_activity,_acting_on_NAD(P)H,_nitrogenous_group_as_acceptor


id: GO:0016667
description: Oxidoreductase activity, acting on a sulfur group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016667
golevel: 3
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0016667_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors


id: GO:0016668
description: Oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016668
golevel: 4
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0016668_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_NAD(P)_as_acceptor


id: GO:0016671
description: Oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016671
golevel: 4
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0016671_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_disulfide_as_acceptor


id: GO:0016684
description: Oxidoreductase activity, acting on peroxide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016684
golevel: 3
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0016684_Oxidoreductase_activity,_acting_on_peroxide_as_acceptor


id: GO:0016701
description: Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen
memo: https://amigo.geneontology.org/amigo/term/GO:0016701
golevel: 3
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0016701_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen


id: GO:0016703
memo: https://amigo.geneontology.org/amigo/term/GO:0016703
golevel: 4
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0016703_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen,_incorporation_of_one_atom_of_oxygen_(internal_monooxygenases_or_internal_mixed_function_oxidases)

description:
  Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)


id: GO:0016705
memo: https://amigo.geneontology.org/amigo/term/GO:0016705
golevel: 3
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0016705_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen


id: GO:0016712
memo: https://amigo.geneontology.org/amigo/term/GO:0016712
golevel: 4
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0016712_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen,_reduced_flavin_or_flavoprotein_as_one_donor,_and_incorporation_of_one_atom_of_oxygen

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen


id: GO:0016726
description: Oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016726
golevel: 4
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0016726_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_NAD_or_NADP_as_acceptor


id: GO:0016728
description: Oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016728
golevel: 4
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0016728_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_disulfide_as_acceptor


id: GO:0016730
description: Oxidoreductase activity, acting on iron-sulfur proteins as donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016730
golevel: 3
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0016730_Oxidoreductase_activity,_acting_on_iron-sulfur_proteins_as_donors


id: GO:0016731
description: Oxidoreductase activity, acting on iron-sulfur proteins as donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016731
golevel: 4
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0016731_Oxidoreductase_activity,_acting_on_iron-sulfur_proteins_as_donors,_NAD_or_NADP_as_acceptor


id: GO:0016742
description: Hydroxymethyl-, formyl- and related transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0016742
golevel: 4
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0016742_Hydroxymethyl-,_formyl-_and_related_transferase_activity


id: GO:0016747
description: Acyltransferase activity, transferring groups other than amino-acyl groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016747
golevel: 4
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0016747_Acyltransferase_activity,_transferring_groups_other_than_amino-acyl_groups


id: GO:0016765
description: Transferase activity, transferring alkyl or aryl (other than methyl) groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016765
golevel: 3
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0016765_Transferase_activity,_transferring_alkyl_or_aryl_(other_than_methyl)_groups


id: GO:0016772
description: Transferase activity, transferring phosphorus-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016772
golevel: 3
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0016772_Transferase_activity,_transferring_phosphorus-containing_groups


id: GO:0016773
description: Phosphotransferase activity, alcohol group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016773
golevel: 4
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0016773_Phosphotransferase_activity,_alcohol_group_as_acceptor


id: GO:0016774
description: Phosphotransferase activity, carboxyl group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016774
golevel: 4
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0016774_Phosphotransferase_activity,_carboxyl_group_as_acceptor


id: GO:0016775
description: Phosphotransferase activity, nitrogenous group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016775
golevel: 4
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0016775_Phosphotransferase_activity,_nitrogenous_group_as_acceptor


id: GO:0016776
description: Phosphotransferase activity, phosphate group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016776
golevel: 4
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0016776_Phosphotransferase_activity,_phosphate_group_as_acceptor


id: GO:0016780
description: Phosphotransferase activity, for other substituted phosphate groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016780
golevel: 4
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0016780_Phosphotransferase_activity,_for_other_substituted_phosphate_groups


id: GO:0016782
description: Transferase activity, transferring sulphur-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016782
golevel: 3
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0016782_Transferase_activity,_transferring_sulphur-containing_groups


id: GO:0016796
memo: https://amigo.geneontology.org/amigo/term/GO:0016796
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0016796_Exonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_5-phosphomonoesters

description:
  Exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5-phosphomonoesters


id: GO:0016810
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
memo: https://amigo.geneontology.org/amigo/term/GO:0016810
golevel: 3
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0016810_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds


id: GO:0016811
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
memo: https://amigo.geneontology.org/amigo/term/GO:0016811
golevel: 4
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0016811_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_linear_amides


id: GO:0016812
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
memo: https://amigo.geneontology.org/amigo/term/GO:0016812
golevel: 4
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0016812_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_cyclic_amides


id: GO:0016813
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines
memo: https://amigo.geneontology.org/amigo/term/GO:0016813
golevel: 4
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0016813_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_linear_amidines


id: GO:0016814
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines
memo: https://amigo.geneontology.org/amigo/term/GO:0016814
golevel: 4
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0016814_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_cyclic_amidines


id: GO:0016818
description: Hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
memo: https://amigo.geneontology.org/amigo/term/GO:0016818
golevel: 4
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0016818_Hydrolase_activity,_acting_on_acid_anhydrides,_in_phosphorus-containing_anhydrides


id: GO:0016855
description: Racemase and epimerase activity, acting on amino acids and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0016855
golevel: 4
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0016855_Racemase_and_epimerase_activity,_acting_on_amino_acids_and_derivatives


id: GO:0016857
description: Racemase and epimerase activity, acting on carbohydrates and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0016857
golevel: 4
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0016857_Racemase_and_epimerase_activity,_acting_on_carbohydrates_and_derivatives


id: GO:0016861
description: Intramolecular oxidoreductase activity, interconverting aldoses and ketoses
memo: https://amigo.geneontology.org/amigo/term/GO:0016861
golevel: 4
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0016861_Intramolecular_oxidoreductase_activity,_interconverting_aldoses_and_ketoses


id: GO:0016863
description: Intramolecular oxidoreductase activity, transposing C=C bonds
memo: https://amigo.geneontology.org/amigo/term/GO:0016863
golevel: 4
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0016863_Intramolecular_oxidoreductase_activity,_transposing_C=C_bonds


id: GO:0016868
description: Intramolecular transferase activity, phosphotransferases
memo: https://amigo.geneontology.org/amigo/term/GO:0016868
golevel: 4
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0016868_Intramolecular_transferase_activity,_phosphotransferases


id: GO:0016884
description: Carbon-nitrogen ligase activity, with glutamine as amido-N-donor
memo: https://amigo.geneontology.org/amigo/term/GO:0016884
golevel: 4
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0016884_Carbon-nitrogen_ligase_activity,_with_glutamine_as_amido-N-donor


id: GO:0016888
description: Endodeoxyribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016888
golevel: 4
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0016888_Endodeoxyribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016889
description: Endodeoxyribonuclease activity, producing 3-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016889
golevel: 4
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0016889_Endodeoxyribonuclease_activity,_producing_3-phosphomonoesters


id: GO:0016891
description: Endoribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016891
golevel: 4
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0016891_Endoribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016893
memo: https://amigo.geneontology.org/amigo/term/GO:0016893
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0016893_Endonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_5-phosphomonoesters

description:
  Endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5-phosphomonoesters


id: GO:0016894
memo: https://amigo.geneontology.org/amigo/term/GO:0016894
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0016894_Endonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_3-phosphomonoesters

description:
  Endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3-phosphomonoesters


id: GO:0016895
description: Exodeoxyribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016895
golevel: 6
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0016895_Exodeoxyribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016896
description: Exoribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016896
golevel: 6
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0016896_Exoribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016903
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016903
golevel: 3
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0016903_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors


id: GO:0019171
description: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0019171
golevel: 5
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0019171_3-hydroxyacyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0019219
description: Regulation of nucleobase-containing compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0019219
golevel: 6
name:
  GOBP.STRING_v12.0_1423814_STRINGid_GO:0019219_Regulation_of_nucleobase-containing_compound_metabolic_process


id: GO:0019287
description: Isopentenyl diphosphate biosynthetic process, mevalonate pathway
memo: https://amigo.geneontology.org/amigo/term/GO:0019287
golevel: 6
name:
  GOBP.STRING_v12.0_1423814_STRINGid_GO:0019287_Isopentenyl_diphosphate_biosynthetic_process,_mevalonate_pathway


id: GO:0019288
description: Isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
memo: https://amigo.geneontology.org/amigo/term/GO:0019288
golevel: 5
name:
  GOBP.STRING_v12.0_1423814_STRINGid_GO:0019288_Isopentenyl_diphosphate_biosynthetic_process,_methylerythritol_4-phosphate_pathway


id: GO:0019829
description: ATPase-coupled cation transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0019829
golevel: 3
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0019829_ATPase-coupled_cation_transmembrane_transporter_activity


id: GO:0030174
description: Regulation of DNA-templated DNA replication initiation
memo: https://amigo.geneontology.org/amigo/term/GO:0030174
golevel: 9
name:
  GOBP.STRING_v12.0_1423814_STRINGid_GO:0030174_Regulation_of_DNA-templated_DNA_replication_initiation


id: GO:0030435
description: Sporulation resulting in formation of a cellular spore
memo: https://amigo.geneontology.org/amigo/term/GO:0030435
golevel: 3
name:
  GOBP.STRING_v12.0_1423814_STRINGid_GO:0030435_Sporulation_resulting_in_formation_of_a_cellular_spore


id: GO:0031250
description: Anaerobic ribonucleoside-triphosphate reductase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0031250
golevel: 3
name:
  GOCC.STRING_v12.0_1423814_STRINGid_GO:0031250_Anaerobic_ribonucleoside-triphosphate_reductase_complex


id: GO:0031554
description: Regulation of DNA-templated transcription, termination
memo: https://amigo.geneontology.org/amigo/term/GO:0031554
golevel: 6
name:
  GOBP.STRING_v12.0_1423814_STRINGid_GO:0031554_Regulation_of_DNA-templated_transcription,_termination


id: GO:0032105
description: Negative regulation of response to extracellular stimulus
memo: https://amigo.geneontology.org/amigo/term/GO:0032105
name:
  GOBP.STRING_v12.0_1423814_STRINGid_GO:0032105_Negative_regulation_of_response_to_extracellular_stimulus


id: GO:0032297
description: Negative regulation of DNA-templated DNA replication initiation
memo: https://amigo.geneontology.org/amigo/term/GO:0032297
golevel: 10
name:
  GOBP.STRING_v12.0_1423814_STRINGid_GO:0032297_Negative_regulation_of_DNA-templated_DNA_replication_initiation


id: GO:0033177
description: Proton-transporting two-sector ATPase complex, proton-transporting domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033177
golevel: 3
name:
  GOCC.STRING_v12.0_1423814_STRINGid_GO:0033177_Proton-transporting_two-sector_ATPase_complex,_proton-transporting_domain


id: GO:0033178
description: Proton-transporting two-sector ATPase complex, catalytic domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033178
golevel: 3
name:
  GOCC.STRING_v12.0_1423814_STRINGid_GO:0033178_Proton-transporting_two-sector_ATPase_complex,_catalytic_domain


id: GO:0033283
description: ATPase-coupled organic acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033283
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0033283_ATPase-coupled_organic_acid_transmembrane_transporter_activity


id: GO:0033284
description: ATPase-coupled carboxylic acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033284
golevel: 3
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0033284_ATPase-coupled_carboxylic_acid_transmembrane_transporter_activity


id: GO:0033744
description: L-methionine:thioredoxin-disulfide S-oxidoreductase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033744
golevel: 5
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0033744_L-methionine:thioredoxin-disulfide_S-oxidoreductase_activity


id: GO:0033818
description: Beta-ketoacyl-acyl-carrier-protein synthase III activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033818
golevel: 5
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0033818_Beta-ketoacyl-acyl-carrier-protein_synthase_III_activity


id: GO:0034023
description: 5-(carboxyamino)imidazole ribonucleotide mutase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0034023
golevel: 4
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0034023_5-(carboxyamino)imidazole_ribonucleotide_mutase_activity


id: GO:0034036
description: Purine ribonucleoside bisphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034036
golevel: 6
name:
  GOBP.STRING_v12.0_1423814_STRINGid_GO:0034036_Purine_ribonucleoside_bisphosphate_biosynthetic_process


id: GO:0034249
description: Negative regulation of cellular amide metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034249
golevel: 6
name:
  GOBP.STRING_v12.0_1423814_STRINGid_GO:0034249_Negative_regulation_of_cellular_amide_metabolic_process


id: GO:0034250
description: Positive regulation of cellular amide metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034250
golevel: 6
name:
  GOBP.STRING_v12.0_1423814_STRINGid_GO:0034250_Positive_regulation_of_cellular_amide_metabolic_process


id: GO:0034257
description: Nicotinamide riboside transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0034257
golevel: 5
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0034257_Nicotinamide_riboside_transmembrane_transporter_activity


id: GO:0034404
description: Nucleobase-containing small molecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034404
golevel: 5
name:
  GOBP.STRING_v12.0_1423814_STRINGid_GO:0034404_Nucleobase-containing_small_molecule_biosynthetic_process


id: GO:0034639
description: L-amino acid efflux transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0034639
golevel: 4
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0034639_L-amino_acid_efflux_transmembrane_transporter_activity


id: GO:0034656
description: Nucleobase-containing small molecule catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034656
golevel: 5
name:
  GOBP.STRING_v12.0_1423814_STRINGid_GO:0034656_Nucleobase-containing_small_molecule_catabolic_process


id: GO:0035592
description: Establishment of protein localization to extracellular region
memo: https://amigo.geneontology.org/amigo/term/GO:0035592
golevel: 4
name:
  GOBP.STRING_v12.0_1423814_STRINGid_GO:0035592_Establishment_of_protein_localization_to_extracellular_region


id: GO:0036361
description: Racemase activity, acting on amino acids and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0036361
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0036361_Racemase_activity,_acting_on_amino_acids_and_derivatives


id: GO:0042083
description: 5,10-methylenetetrahydrofolate-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0042083
golevel: 5
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0042083_5,10-methylenetetrahydrofolate-dependent_methyltransferase_activity


id: GO:0042084
description: 5-methyltetrahydrofolate-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0042084
golevel: 5
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0042084_5-methyltetrahydrofolate-dependent_methyltransferase_activity


id: GO:0042085
description: 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0042085
golevel: 5
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0042085_5-methyltetrahydropteroyltri-L-glutamate-dependent_methyltransferase_activity


id: GO:0042173
description: Regulation of sporulation resulting in formation of a cellular spore
memo: https://amigo.geneontology.org/amigo/term/GO:0042173
golevel: 5
name:
  GOBP.STRING_v12.0_1423814_STRINGid_GO:0042173_Regulation_of_sporulation_resulting_in_formation_of_a_cellular_spore


id: GO:0042174
description: Negative regulation of sporulation resulting in formation of a cellular spore
memo: https://amigo.geneontology.org/amigo/term/GO:0042174
golevel: 6
name:
  GOBP.STRING_v12.0_1423814_STRINGid_GO:0042174_Negative_regulation_of_sporulation_resulting_in_formation_of_a_cellular_spore


id: GO:0042777
description: Proton motive force-driven plasma membrane ATP synthesis
memo: https://amigo.geneontology.org/amigo/term/GO:0042777
golevel: 9
name:
  GOBP.STRING_v12.0_1423814_STRINGid_GO:0042777_Proton_motive_force-driven_plasma_membrane_ATP_synthesis


id: GO:0043225
description: ATPase-coupled inorganic anion transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0043225
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0043225_ATPase-coupled_inorganic_anion_transmembrane_transporter_activity


id: GO:0043242
description: Negative regulation of protein-containing complex disassembly
memo: https://amigo.geneontology.org/amigo/term/GO:0043242
golevel: 6
name:
  GOBP.STRING_v12.0_1423814_STRINGid_GO:0043242_Negative_regulation_of_protein-containing_complex_disassembly


id: GO:0043365
description: [formate-C-acetyltransferase]-activating enzyme activity
memo: https://amigo.geneontology.org/amigo/term/GO:0043365
golevel: 4
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0043365_[formate-C-acetyltransferase]-activating_enzyme_activity


id: GO:0043772
description: Acyl-phosphate glycerol-3-phosphate acyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0043772
golevel: 5
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0043772_Acyl-phosphate_glycerol-3-phosphate_acyltransferase_activity


id: GO:0043811
description: Phosphate:acyl-[acyl carrier protein] acyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0043811
golevel: 5
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0043811_Phosphate:acyl-[acyl_carrier_protein]_acyltransferase_activity


id: GO:0044419
description: Biological process involved in interspecies interaction between organisms
memo: https://amigo.geneontology.org/amigo/term/GO:0044419
golevel: 1
name:
  GOBP.STRING_v12.0_1423814_STRINGid_GO:0044419_Biological_process_involved_in_interspecies_interaction_between_organisms


id: GO:0044769
description: ATPase activity, coupled to transmembrane movement of ions, rotational mechanism
memo: https://amigo.geneontology.org/amigo/term/GO:0044769
golevel: 4
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0044769_ATPase_activity,_coupled_to_transmembrane_movement_of_ions,_rotational_mechanism


id: GO:0045261
description: Proton-transporting ATP synthase complex, catalytic core F(1)
memo: https://amigo.geneontology.org/amigo/term/GO:0045261
name:
  GOCC.STRING_v12.0_1423814_STRINGid_GO:0045261_Proton-transporting_ATP_synthase_complex,_catalytic_core_F(1)


id: GO:0045263
description: Proton-transporting ATP synthase complex, coupling factor F(o)
memo: https://amigo.geneontology.org/amigo/term/GO:0045263
name:
  GOCC.STRING_v12.0_1423814_STRINGid_GO:0045263_Proton-transporting_ATP_synthase_complex,_coupling_factor_F(o)


id: GO:0045304
description: Regulation of establishment of competence for transformation
memo: https://amigo.geneontology.org/amigo/term/GO:0045304
golevel: 4
name:
  GOBP.STRING_v12.0_1423814_STRINGid_GO:0045304_Regulation_of_establishment_of_competence_for_transformation


id: GO:0045934
description: Negative regulation of nucleobase-containing compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0045934
golevel: 6
name:
  GOBP.STRING_v12.0_1423814_STRINGid_GO:0045934_Negative_regulation_of_nucleobase-containing_compound_metabolic_process


id: GO:0045935
description: Positive regulation of nucleobase-containing compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0045935
name:
  GOBP.STRING_v12.0_1423814_STRINGid_GO:0045935_Positive_regulation_of_nucleobase-containing_compound_metabolic_process


id: GO:0045982
description: Negative regulation of purine nucleobase metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0045982
golevel: 7
name:
  GOBP.STRING_v12.0_1423814_STRINGid_GO:0045982_Negative_regulation_of_purine_nucleobase_metabolic_process


id: GO:0046538
description: 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0046538
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0046538_2,3-bisphosphoglycerate-dependent_phosphoglycerate_mutase_activity


id: GO:0046912
description: Acyltransferase activity, acyl groups converted into alkyl on transfer
memo: https://amigo.geneontology.org/amigo/term/GO:0046912
golevel: 4
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0046912_Acyltransferase_activity,_acyl_groups_converted_into_alkyl_on_transfer


id: GO:0046915
description: Transition metal ion transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0046915
golevel: 6
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0046915_Transition_metal_ion_transmembrane_transporter_activity


id: GO:0046933
description: Proton-transporting ATP synthase activity, rotational mechanism
memo: https://amigo.geneontology.org/amigo/term/GO:0046933
golevel: 3
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0046933_Proton-transporting_ATP_synthase_activity,_rotational_mechanism


id: GO:0046961
description: Proton-transporting ATPase activity, rotational mechanism
memo: https://amigo.geneontology.org/amigo/term/GO:0046961
golevel: 4
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0046961_Proton-transporting_ATPase_activity,_rotational_mechanism


id: GO:0047451
description: 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0047451
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0047451_3-hydroxyoctanoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0047480
description: UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0047480
golevel: 5
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0047480_UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine_ligase_activity


id: GO:0048646
description: Anatomical structure formation involved in morphogenesis
memo: https://amigo.geneontology.org/amigo/term/GO:0048646
golevel: 2
name:
  GOBP.STRING_v12.0_1423814_STRINGid_GO:0048646_Anatomical_structure_formation_involved_in_morphogenesis


id: GO:0050511
description: Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050511
golevel: 6
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0050511_Undecaprenyldiphospho-muramoylpentapeptide_beta-N-acetylglucosaminyltransferase_activity


id: GO:0050515
description: 4-(cytidine 5-diphospho)-2-C-methyl-D-erythritol kinase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050515
golevel: 5
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0050515_4-(cytidine_5-diphospho)-2-C-methyl-D-erythritol_kinase_activity


id: GO:0050566
description: asparaginyl-tRNA synthase (glutamine-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050566
golevel: 5
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0050566_asparaginyl-tRNA_synthase_(glutamine-hydrolyzing)_activity


id: GO:0050567
description: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050567
golevel: 5
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0050567_glutaminyl-tRNA_synthase_(glutamine-hydrolyzing)_activity


id: GO:0051129
description: Negative regulation of cellular component organization
memo: https://amigo.geneontology.org/amigo/term/GO:0051129
golevel: 5
name:
  GOBP.STRING_v12.0_1423814_STRINGid_GO:0051129_Negative_regulation_of_cellular_component_organization


id: GO:0051172
description: Negative regulation of nitrogen compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0051172
name:
  GOBP.STRING_v12.0_1423814_STRINGid_GO:0051172_Negative_regulation_of_nitrogen_compound_metabolic_process


id: GO:0051173
description: Positive regulation of nitrogen compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0051173
name:
  GOBP.STRING_v12.0_1423814_STRINGid_GO:0051173_Positive_regulation_of_nitrogen_compound_metabolic_process


id: GO:0051703
description: Biological process involved in intraspecies interaction between organisms
memo: https://amigo.geneontology.org/amigo/term/GO:0051703
golevel: 1
name:
  GOBP.STRING_v12.0_1423814_STRINGid_GO:0051703_Biological_process_involved_in_intraspecies_interaction_between_organisms


id: GO:0051748
description: UTP-monosaccharide-1-phosphate uridylyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0051748
golevel: 6
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0051748_UTP-monosaccharide-1-phosphate_uridylyltransferase_activity


id: GO:0051991
memo: https://amigo.geneontology.org/amigo/term/GO:0051991
golevel: 6
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0051991_UDP-N-acetyl-D-glucosamine:N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenol_4-beta-N-acetylglucosaminlytransferase_activity

description:
  UDP-N-acetyl-D-glucosamine:N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenol 4-beta-N-acetylglucosaminlytransferase activity


id: GO:0051992
memo: https://amigo.geneontology.org/amigo/term/GO:0051992
golevel: 5
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0051992_UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine:undecaprenyl-phosphate_transferase_activity

description:
  UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine:undecaprenyl-phosphate transferase activity


id: GO:0052908
description: 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0052908
golevel: 7
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0052908_16S_rRNA_(adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase_activity


id: GO:0052929
description: ATP:3-cytidine-cytidine-tRNA adenylyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0052929
golevel: 5
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0052929_ATP:3-cytidine-cytidine-tRNA_adenylyltransferase_activity


id: GO:0055086
description: Nucleobase-containing small molecule metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0055086
golevel: 4
name:
  GOBP.STRING_v12.0_1423814_STRINGid_GO:0055086_Nucleobase-containing_small_molecule_metabolic_process


id: GO:0060567
description: Negative regulation of DNA-templated transcription, termination
memo: https://amigo.geneontology.org/amigo/term/GO:0060567
golevel: 7
name:
  GOBP.STRING_v12.0_1423814_STRINGid_GO:0060567_Negative_regulation_of_DNA-templated_transcription,_termination


id: GO:0061695
description: Transferase complex, transferring phosphorus-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0061695
golevel: 4
name:
  GOCC.STRING_v12.0_1423814_STRINGid_GO:0061695_Transferase_complex,_transferring_phosphorus-containing_groups


id: GO:0062014
description: Negative regulation of small molecule metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0062014
golevel: 6
name:
  GOBP.STRING_v12.0_1423814_STRINGid_GO:0062014_Negative_regulation_of_small_molecule_metabolic_process


id: GO:0070626
memo: https://amigo.geneontology.org/amigo/term/GO:0070626
golevel: 5
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0070626_(S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)_succinate_lyase_(fumarate-forming)_activity

description:
  (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido) succinate lyase (fumarate-forming) activity


id: GO:0070647
description: Protein modification by small protein conjugation or removal
memo: https://amigo.geneontology.org/amigo/term/GO:0070647
golevel: 7
name:
  GOBP.STRING_v12.0_1423814_STRINGid_GO:0070647_Protein_modification_by_small_protein_conjugation_or_removal


id: GO:0071951
description: Conversion of methionyl-tRNA to N-formyl-methionyl-tRNA
memo: https://amigo.geneontology.org/amigo/term/GO:0071951
golevel: 8
name:
  GOBP.STRING_v12.0_1423814_STRINGid_GO:0071951_Conversion_of_methionyl-tRNA_to_N-formyl-methionyl-tRNA


id: GO:0072531
description: Pyrimidine-containing compound transmembrane transport
memo: https://amigo.geneontology.org/amigo/term/GO:0072531
golevel: 3
name:
  GOBP.STRING_v12.0_1423814_STRINGid_GO:0072531_Pyrimidine-containing_compound_transmembrane_transport


id: GO:0072599
description: Establishment of protein localization to endoplasmic reticulum
memo: https://amigo.geneontology.org/amigo/term/GO:0072599
golevel: 5
name:
  GOBP.STRING_v12.0_1423814_STRINGid_GO:0072599_Establishment_of_protein_localization_to_endoplasmic_reticulum


id: GO:0102027
description: S-adenosylmethionine:2-demethylquinol-8 methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0102027
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0102027_S-adenosylmethionine:2-demethylquinol-8_methyltransferase_activity


id: GO:0102094
description: S-adenosylmethionine:2-demethylmenaquinol methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0102094
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0102094_S-adenosylmethionine:2-demethylmenaquinol_methyltransferase_activity


id: GO:0102955
description: S-adenosylmethionine:2-demethylmenaquinol-7 methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0102955
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0102955_S-adenosylmethionine:2-demethylmenaquinol-7_methyltransferase_activity


id: GO:0106074
description: aminoacyl-tRNA metabolism involved in translational fidelity
memo: https://amigo.geneontology.org/amigo/term/GO:0106074
golevel: 4
name:
  GOBP.STRING_v12.0_1423814_STRINGid_GO:0106074_aminoacyl-tRNA_metabolism_involved_in_translational_fidelity


id: GO:0140078
description: Class I DNA-(apurinic or apyrimidinic site) endonuclease activity
memo: https://amigo.geneontology.org/amigo/term/GO:0140078
golevel: 4
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:0140078_Class_I_DNA-(apurinic_or_apyrimidinic_site)_endonuclease_activity


id: GO:1900192
description: Positive regulation of single-species biofilm formation
memo: https://amigo.geneontology.org/amigo/term/GO:1900192
golevel: 5
name:
  GOBP.STRING_v12.0_1423814_STRINGid_GO:1900192_Positive_regulation_of_single-species_biofilm_formation


id: GO:1900231
description: Regulation of single-species biofilm formation on inanimate substrate
memo: https://amigo.geneontology.org/amigo/term/GO:1900231
golevel: 5
name:
  GOBP.STRING_v12.0_1423814_STRINGid_GO:1900231_Regulation_of_single-species_biofilm_formation_on_inanimate_substrate


id: GO:1901505
description: Carbohydrate derivative transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:1901505
golevel: 3
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:1901505_Carbohydrate_derivative_transmembrane_transporter_activity


id: GO:1901618
description: Organic hydroxy compound transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:1901618
name:
  GOMF.STRING_v12.0_1423814_STRINGid_GO:1901618_Organic_hydroxy_compound_transmembrane_transporter_activity


id: GO:1902011
description: Poly(ribitol phosphate) teichoic acid metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:1902011
name:
  GOBP.STRING_v12.0_1423814_STRINGid_GO:1902011_Poly(ribitol_phosphate)_teichoic_acid_metabolic_process


id: GO:1902012
description: Poly(ribitol phosphate) teichoic acid biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:1902012
golevel: 6
name:
  GOBP.STRING_v12.0_1423814_STRINGid_GO:1902012_Poly(ribitol_phosphate)_teichoic_acid_biosynthetic_process


id: GO:1903507
description: Negative regulation of nucleic acid-templated transcription
memo: https://amigo.geneontology.org/amigo/term/GO:1903507
name:
  GOBP.STRING_v12.0_1423814_STRINGid_GO:1903507_Negative_regulation_of_nucleic_acid-templated_transcription


id: GO:1903508
description: Positive regulation of nucleic acid-templated transcription
memo: https://amigo.geneontology.org/amigo/term/GO:1903508
name:
  GOBP.STRING_v12.0_1423814_STRINGid_GO:1903508_Positive_regulation_of_nucleic_acid-templated_transcription


id: GO:2000112
description: Regulation of cellular macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:2000112
name:
  GOBP.STRING_v12.0_1423814_STRINGid_GO:2000112_Regulation_of_cellular_macromolecule_biosynthetic_process


id: GO:2000113
description: Negative regulation of cellular macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:2000113
name:
  GOBP.STRING_v12.0_1423814_STRINGid_GO:2000113_Negative_regulation_of_cellular_macromolecule_biosynthetic_process


id: GOCC:0000015
description: Phosphopyruvate hydratase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000015
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0000015_Phosphopyruvate_hydratase_complex


id: GOCC:0000118
description: Histone deacetylase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000118
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0000118_Histone_deacetylase_complex


id: GOCC:0000159
description: Protein phosphatase type 2A complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000159
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0000159_Protein_phosphatase_type_2A_complex


id: GOCC:0000228
description: Nuclear chromosome
memo: https://amigo.geneontology.org/amigo/term/GO:0000228
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0000228_Nuclear_chromosome


id: GOCC:0000324
description: Fungal-type vacuole
memo: https://amigo.geneontology.org/amigo/term/GO:0000324
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0000324_Fungal-type_vacuole


id: GOCC:0000329
description: Fungal-type vacuole membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0000329
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0000329_Fungal-type_vacuole_membrane


id: GOCC:0000408
description: EKC/KEOPS complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000408
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0000408_EKC/KEOPS_complex


id: GOCC:0000428
description: DNA-directed RNA polymerase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000428
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0000428_DNA-directed_RNA_polymerase_complex


id: GOCC:0000502
description: Proteasome complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000502
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0000502_Proteasome_complex


id: GOCC:0000775
description: Chromosome, centromeric region
memo: https://amigo.geneontology.org/amigo/term/GO:0000775
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0000775_Chromosome,_centromeric_region


id: GOCC:0000779
description: Condensed chromosome, centromeric region
memo: https://amigo.geneontology.org/amigo/term/GO:0000779
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0000779_Condensed_chromosome,_centromeric_region


id: GOCC:0000781
description: Chromosome, telomeric region
memo: https://amigo.geneontology.org/amigo/term/GO:0000781
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0000781_Chromosome,_telomeric_region


id: GOCC:0000793
description: Condensed chromosome
memo: https://amigo.geneontology.org/amigo/term/GO:0000793
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0000793_Condensed_chromosome


id: GOCC:0000930
description: Gamma-tubulin complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000930
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0000930_Gamma-tubulin_complex


id: GOCC:0000931
description: Gamma-tubulin large complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000931
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0000931_Gamma-tubulin_large_complex


id: GOCC:0002189
description: Ribose phosphate diphosphokinase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0002189
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0002189_Ribose_phosphate_diphosphokinase_complex


id: GOCC:0005576
description: Extracellular region
memo: https://amigo.geneontology.org/amigo/term/GO:0005576
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0005576_Extracellular_region


id: GOCC:0005604
description: Basement membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0005604
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0005604_Basement_membrane


id: GOCC:0005615
description: Extracellular space
memo: https://amigo.geneontology.org/amigo/term/GO:0005615
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0005615_Extracellular_space


id: GOCC:0005727
description: Extrachromosomal circular DNA
memo: https://amigo.geneontology.org/amigo/term/GO:0005727
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0005727_Extrachromosomal_circular_DNA


id: GOCC:0005740
description: Mitochondrial envelope
memo: https://amigo.geneontology.org/amigo/term/GO:0005740
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0005740_Mitochondrial_envelope


id: GOCC:0005743
description: Mitochondrial inner membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0005743
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0005743_Mitochondrial_inner_membrane


id: GOCC:0005746
description: Mitochondrial respirasome
memo: https://amigo.geneontology.org/amigo/term/GO:0005746
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0005746_Mitochondrial_respirasome


id: GOCC:0005747
description: Mitochondrial respiratory chain complex I
memo: https://amigo.geneontology.org/amigo/term/GO:0005747
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0005747_Mitochondrial_respiratory_chain_complex_I


id: GOCC:0005759
description: Mitochondrial matrix
memo: https://amigo.geneontology.org/amigo/term/GO:0005759
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0005759_Mitochondrial_matrix


id: GOCC:0005774
description: Vacuolar membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0005774
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0005774_Vacuolar_membrane


id: GOCC:0005778
description: Peroxisomal membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0005778
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0005778_Peroxisomal_membrane


id: GOCC:0005783
description: Endoplasmic reticulum
memo: https://amigo.geneontology.org/amigo/term/GO:0005783
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0005783_Endoplasmic_reticulum


id: GOCC:0005788
description: Endoplasmic reticulum lumen
memo: https://amigo.geneontology.org/amigo/term/GO:0005788
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0005788_Endoplasmic_reticulum_lumen


id: GOCC:0005789
description: Endoplasmic reticulum membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0005789
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0005789_Endoplasmic_reticulum_membrane


id: GOCC:0005798
description: Golgi-associated vesicle
memo: https://amigo.geneontology.org/amigo/term/GO:0005798
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0005798_Golgi-associated_vesicle


id: GOCC:0005815
description: Microtubule organizing center
memo: https://amigo.geneontology.org/amigo/term/GO:0005815
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0005815_Microtubule_organizing_center


id: GOCC:0005835
description: Fatty acid synthase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005835
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0005835_Fatty_acid_synthase_complex


id: GOCC:0005885
description: Arp2/3 protein complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005885
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0005885_Arp2/3_protein_complex


id: GOCC:0005887
description: Integral component of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0005887
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0005887_Integral_component_of_plasma_membrane


id: GOCC:0005911
description: Cell-cell junction
memo: https://amigo.geneontology.org/amigo/term/GO:0005911
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0005911_Cell-cell_junction


id: GOCC:0005951
description: Carbamoyl-phosphate synthase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005951
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0005951_Carbamoyl-phosphate_synthase_complex


id: GOCC:0005960
description: Glycine cleavage complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005960
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0005960_Glycine_cleavage_complex


id: GOCC:0005963
description: Magnesium-dependent protein serine/threonine phosphatase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005963
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0005963_Magnesium-dependent_protein_serine/threonine_phosphatase_complex


id: GOCC:0005971
description: Ribonucleoside-diphosphate reductase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005971
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0005971_Ribonucleoside-diphosphate_reductase_complex


id: GOCC:0008076
description: Voltage-gated potassium channel complex
memo: https://amigo.geneontology.org/amigo/term/GO:0008076
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0008076_Voltage-gated_potassium_channel_complex


id: GOCC:0008287
description: Protein serine/threonine phosphatase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0008287
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0008287_Protein_serine/threonine_phosphatase_complex


id: GOCC:0009279
description: Cell outer membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0009279
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0009279_Cell_outer_membrane


id: GOCC:0009288
description: Bacterial-type flagellum
memo: https://amigo.geneontology.org/amigo/term/GO:0009288
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0009288_Bacterial-type_flagellum


id: GOCC:0009317
description: acetyl-CoA carboxylase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009317
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0009317_acetyl-CoA_carboxylase_complex


id: GOCC:0009318
description: Exodeoxyribonuclease VII complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009318
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0009318_Exodeoxyribonuclease_VII_complex


id: GOCC:0009321
description: Alkyl hydroperoxide reductase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009321
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0009321_Alkyl_hydroperoxide_reductase_complex


id: GOCC:0009326
description: Formate dehydrogenase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009326
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0009326_Formate_dehydrogenase_complex


id: GOCC:0009328
description: phenylalanine-tRNA ligase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009328
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0009328_phenylalanine-tRNA_ligase_complex


id: GOCC:0009330
description: DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009330
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0009330_DNA_topoisomerase_type_II_(double_strand_cut,_ATP-hydrolyzing)_complex


id: GOCC:0009331
description: glycerol-3-phosphate dehydrogenase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009331
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0009331_glycerol-3-phosphate_dehydrogenase_complex


id: GOCC:0009338
description: Exodeoxyribonuclease V complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009338
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0009338_Exodeoxyribonuclease_V_complex


id: GOCC:0009341
description: Beta-galactosidase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009341
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0009341_Beta-galactosidase_complex


id: GOCC:0009345
description: glycine-tRNA ligase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009345
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0009345_glycine-tRNA_ligase_complex


id: GOCC:0009347
description: Aspartate carbamoyltransferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009347
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0009347_Aspartate_carbamoyltransferase_complex


id: GOCC:0009358
description: Polyphosphate kinase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009358
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0009358_Polyphosphate_kinase_complex


id: GOCC:0009360
description: DNA polymerase III complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009360
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0009360_DNA_polymerase_III_complex


id: GOCC:0009366
description: Enterobactin synthetase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009366
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0009366_Enterobactin_synthetase_complex


id: GOCC:0009376
description: HslUV protease complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009376
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0009376_HslUV_protease_complex


id: GOCC:0009379
description: Holliday junction helicase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009379
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0009379_Holliday_junction_helicase_complex


id: GOCC:0009380
description: Excinuclease repair complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009380
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0009380_Excinuclease_repair_complex


id: GOCC:0009505
description: Plant-type cell wall
memo: https://amigo.geneontology.org/amigo/term/GO:0009505
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0009505_Plant-type_cell_wall


id: GOCC:0009538
description: Photosystem I reaction center
memo: https://amigo.geneontology.org/amigo/term/GO:0009538
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0009538_Photosystem_I_reaction_center


id: GOCC:0009570
description: Chloroplast stroma
memo: https://amigo.geneontology.org/amigo/term/GO:0009570
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0009570_Chloroplast_stroma


id: GOCC:0009898
description: Cytoplasmic side of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0009898
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0009898_Cytoplasmic_side_of_plasma_membrane


id: GOCC:0012505
description: Endomembrane system
memo: https://amigo.geneontology.org/amigo/term/GO:0012505
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0012505_Endomembrane_system


id: GOCC:0012507
description: ER to Golgi transport vesicle membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0012507
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0012507_ER_to_Golgi_transport_vesicle_membrane


id: GOCC:0015627
description: Type II protein secretion system complex
memo: https://amigo.geneontology.org/amigo/term/GO:0015627
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0015627_Type_II_protein_secretion_system_complex


id: GOCC:0015629
description: Actin cytoskeleton
memo: https://amigo.geneontology.org/amigo/term/GO:0015629
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0015629_Actin_cytoskeleton


id: GOCC:0015630
description: Microtubule cytoskeleton
memo: https://amigo.geneontology.org/amigo/term/GO:0015630
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0015630_Microtubule_cytoskeleton


id: GOCC:0015934
description: Large ribosomal subunit
memo: https://amigo.geneontology.org/amigo/term/GO:0015934
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0015934_Large_ribosomal_subunit


id: GOCC:0015935
description: Small ribosomal subunit
memo: https://amigo.geneontology.org/amigo/term/GO:0015935
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0015935_Small_ribosomal_subunit


id: GOCC:0016021
description: Integral component of membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0016021
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0016021_Integral_component_of_membrane


id: GOCC:0016465
description: Chaperonin ATPase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0016465
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0016465_Chaperonin_ATPase_complex


id: GOCC:0016469
description: Proton-transporting two-sector ATPase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0016469
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0016469_Proton-transporting_two-sector_ATPase_complex


id: GOCC:0017101
description: aminoacyl-tRNA synthetase multienzyme complex
memo: https://amigo.geneontology.org/amigo/term/GO:0017101
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0017101_aminoacyl-tRNA_synthetase_multienzyme_complex


id: GOCC:0017122
description: Protein N-acetylglucosaminyltransferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0017122
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0017122_Protein_N-acetylglucosaminyltransferase_complex


id: GOCC:0018995
description: Host cellular component
memo: https://amigo.geneontology.org/amigo/term/GO:0018995
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0018995_Host_cellular_component


id: GOCC:0019866
description: Organelle inner membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0019866
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0019866_Organelle_inner_membrane


id: GOCC:0019897
description: Extrinsic component of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0019897
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0019897_Extrinsic_component_of_plasma_membrane


id: GOCC:0019898
description: Extrinsic component of membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0019898
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0019898_Extrinsic_component_of_membrane


id: GOCC:0022625
description: Cytosolic large ribosomal subunit
memo: https://amigo.geneontology.org/amigo/term/GO:0022625
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0022625_Cytosolic_large_ribosomal_subunit


id: GOCC:0022626
description: Cytosolic ribosome
memo: https://amigo.geneontology.org/amigo/term/GO:0022626
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0022626_Cytosolic_ribosome


id: GOCC:0022627
description: Cytosolic small ribosomal subunit
memo: https://amigo.geneontology.org/amigo/term/GO:0022627
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0022627_Cytosolic_small_ribosomal_subunit


id: GOCC:0030075
description: Bacterial thylakoid
memo: https://amigo.geneontology.org/amigo/term/GO:0030075
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0030075_Bacterial_thylakoid


id: GOCC:0030127
description: COPII vesicle coat
memo: https://amigo.geneontology.org/amigo/term/GO:0030127
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0030127_COPII_vesicle_coat


id: GOCC:0030133
description: Transport vesicle
memo: https://amigo.geneontology.org/amigo/term/GO:0030133
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0030133_Transport_vesicle


id: GOCC:0030134
description: COPII-coated ER to Golgi transport vesicle
memo: https://amigo.geneontology.org/amigo/term/GO:0030134
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0030134_COPII-coated_ER_to_Golgi_transport_vesicle


id: GOCC:0030288
description: Outer membrane-bounded periplasmic space
memo: https://amigo.geneontology.org/amigo/term/GO:0030288
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0030288_Outer_membrane-bounded_periplasmic_space


id: GOCC:0030312
description: External encapsulating structure
memo: https://amigo.geneontology.org/amigo/term/GO:0030312
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0030312_External_encapsulating_structure


id: GOCC:0030658
description: Transport vesicle membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0030658
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0030658_Transport_vesicle_membrane


id: GOCC:0030659
description: Cytoplasmic vesicle membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0030659
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0030659_Cytoplasmic_vesicle_membrane


id: GOCC:0030660
description: Golgi-associated vesicle membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0030660
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0030660_Golgi-associated_vesicle_membrane


id: GOCC:0030662
description: Coated vesicle membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0030662
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0030662_Coated_vesicle_membrane


id: GOCC:0030677
description: Ribonuclease P complex
memo: https://amigo.geneontology.org/amigo/term/GO:0030677
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0030677_Ribonuclease_P_complex


id: GOCC:0030880
description: RNA polymerase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0030880
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0030880_RNA_polymerase_complex


id: GOCC:0030956
description: glutamyl-tRNA(Gln) amidotransferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0030956
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0030956_glutamyl-tRNA(Gln)_amidotransferase_complex


id: GOCC:0030964
description: NADH dehydrogenase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0030964
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0030964_NADH_dehydrogenase_complex


id: GOCC:0031012
description: Extracellular matrix
memo: https://amigo.geneontology.org/amigo/term/GO:0031012
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0031012_Extracellular_matrix


id: GOCC:0031090
description: Organelle membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031090
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0031090_Organelle_membrane


id: GOCC:0031224
description: Intrinsic component of membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031224
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0031224_Intrinsic_component_of_membrane


id: GOCC:0031225
description: Anchored component of membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031225
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0031225_Anchored_component_of_membrane


id: GOCC:0031226
description: Intrinsic component of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031226
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0031226_Intrinsic_component_of_plasma_membrane


id: GOCC:0031250
description: Anaerobic ribonucleoside-triphosphate reductase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0031250
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0031250_Anaerobic_ribonucleoside-triphosphate_reductase_complex


id: GOCC:0031300
description: Intrinsic component of organelle membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031300
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0031300_Intrinsic_component_of_organelle_membrane


id: GOCC:0031301
description: Integral component of organelle membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031301
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0031301_Integral_component_of_organelle_membrane


id: GOCC:0031304
description: Intrinsic component of mitochondrial inner membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031304
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0031304_Intrinsic_component_of_mitochondrial_inner_membrane


id: GOCC:0031305
description: Integral component of mitochondrial inner membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031305
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0031305_Integral_component_of_mitochondrial_inner_membrane


id: GOCC:0031410
description: Cytoplasmic vesicle
memo: https://amigo.geneontology.org/amigo/term/GO:0031410
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0031410_Cytoplasmic_vesicle


id: GOCC:0031469
description: Polyhedral organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0031469
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0031469_Polyhedral_organelle


id: GOCC:0031515
description: tRNA (m1A) methyltransferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0031515
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0031515_tRNA_(m1A)_methyltransferase_complex


id: GOCC:0031522
description: Cell envelope Sec protein transport complex
memo: https://amigo.geneontology.org/amigo/term/GO:0031522
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0031522_Cell_envelope_Sec_protein_transport_complex


id: GOCC:0031597
description: Cytosolic proteasome complex
memo: https://amigo.geneontology.org/amigo/term/GO:0031597
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0031597_Cytosolic_proteasome_complex


id: GOCC:0031903
description: Microbody membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031903
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0031903_Microbody_membrane


id: GOCC:0031966
description: Mitochondrial membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031966
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0031966_Mitochondrial_membrane


id: GOCC:0031967
description: Organelle envelope
memo: https://amigo.geneontology.org/amigo/term/GO:0031967
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0031967_Organelle_envelope


id: GOCC:0031974
description: Membrane-enclosed lumen
memo: https://amigo.geneontology.org/amigo/term/GO:0031974
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0031974_Membrane-enclosed_lumen


id: GOCC:0031984
description: Organelle subcompartment
memo: https://amigo.geneontology.org/amigo/term/GO:0031984
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0031984_Organelle_subcompartment


id: GOCC:0032153
description: Cell division site
memo: https://amigo.geneontology.org/amigo/term/GO:0032153
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0032153_Cell_division_site


id: GOCC:0032156
description: Septin cytoskeleton
memo: https://amigo.geneontology.org/amigo/term/GO:0032156
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0032156_Septin_cytoskeleton


id: GOCC:0032299
description: Ribonuclease H2 complex
memo: https://amigo.geneontology.org/amigo/term/GO:0032299
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0032299_Ribonuclease_H2_complex


id: GOCC:0032300
description: Mismatch repair complex
memo: https://amigo.geneontology.org/amigo/term/GO:0032300
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0032300_Mismatch_repair_complex


id: GOCC:0032592
description: Integral component of mitochondrial membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0032592
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0032592_Integral_component_of_mitochondrial_membrane


id: GOCC:0032991
description: Protein-containing complex
memo: https://amigo.geneontology.org/amigo/term/GO:0032991
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0032991_Protein-containing_complex


id: GOCC:0032993
description: protein-DNA complex
memo: https://amigo.geneontology.org/amigo/term/GO:0032993
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0032993_protein-DNA_complex


id: GOCC:0033176
description: Proton-transporting V-type ATPase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0033176
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0033176_Proton-transporting_V-type_ATPase_complex


id: GOCC:0033177
description: Proton-transporting two-sector ATPase complex, proton-transporting domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033177
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0033177_Proton-transporting_two-sector_ATPase_complex,_proton-transporting_domain


id: GOCC:0033178
description: Proton-transporting two-sector ATPase complex, catalytic domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033178
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0033178_Proton-transporting_two-sector_ATPase_complex,_catalytic_domain


id: GOCC:0033179
description: Proton-transporting V-type ATPase, V0 domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033179
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0033179_Proton-transporting_V-type_ATPase,_V0_domain


id: GOCC:0033202
description: DNA helicase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0033202
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0033202_DNA_helicase_complex


id: GOCC:0034357
description: Photosynthetic membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0034357
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0034357_Photosynthetic_membrane


id: GOCC:0034702
description: Ion channel complex
memo: https://amigo.geneontology.org/amigo/term/GO:0034702
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0034702_Ion_channel_complex


id: GOCC:0034703
description: Cation channel complex
memo: https://amigo.geneontology.org/amigo/term/GO:0034703
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0034703_Cation_channel_complex


id: GOCC:0034705
description: Potassium channel complex
memo: https://amigo.geneontology.org/amigo/term/GO:0034705
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0034705_Potassium_channel_complex


id: GOCC:0034707
description: Chloride channel complex
memo: https://amigo.geneontology.org/amigo/term/GO:0034707
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0034707_Chloride_channel_complex


id: GOCC:0034708
description: Methyltransferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0034708
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0034708_Methyltransferase_complex


id: GOCC:0035770
description: Ribonucleoprotein granule
memo: https://amigo.geneontology.org/amigo/term/GO:0035770
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0035770_Ribonucleoprotein_granule


id: GOCC:0035861
description: Site of double-strand break
memo: https://amigo.geneontology.org/amigo/term/GO:0035861
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0035861_Site_of_double-strand_break


id: GOCC:0036464
description: Cytoplasmic ribonucleoprotein granule
memo: https://amigo.geneontology.org/amigo/term/GO:0036464
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0036464_Cytoplasmic_ribonucleoprotein_granule


id: GOCC:0036477
description: Somatodendritic compartment
memo: https://amigo.geneontology.org/amigo/term/GO:0036477
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0036477_Somatodendritic_compartment


id: GOCC:0042175
description: Nuclear outer membrane-endoplasmic reticulum membrane network
memo: https://amigo.geneontology.org/amigo/term/GO:0042175
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0042175_Nuclear_outer_membrane-endoplasmic_reticulum_membrane_network


id: GOCC:0042575
description: DNA polymerase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0042575
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0042575_DNA_polymerase_complex


id: GOCC:0042597
description: Periplasmic space
memo: https://amigo.geneontology.org/amigo/term/GO:0042597
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0042597_Periplasmic_space


id: GOCC:0043005
description: Neuron projection
memo: https://amigo.geneontology.org/amigo/term/GO:0043005
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0043005_Neuron_projection


id: GOCC:0043025
description: Neuronal cell body
memo: https://amigo.geneontology.org/amigo/term/GO:0043025
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0043025_Neuronal_cell_body


id: GOCC:0043190
description: ATP-binding cassette (ABC) transporter complex
memo: https://amigo.geneontology.org/amigo/term/GO:0043190
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0043190_ATP-binding_cassette_(ABC)_transporter_complex


id: GOCC:0043227
description: Membrane-bounded organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0043227
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0043227_Membrane-bounded_organelle


id: GOCC:0043228
description: Non-membrane-bounded organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0043228
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0043228_Non-membrane-bounded_organelle


id: GOCC:0043229
description: Intracellular organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0043229
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0043229_Intracellular_organelle


id: GOCC:0043230
description: Extracellular organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0043230
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0043230_Extracellular_organelle


id: GOCC:0043231
description: Intracellular membrane-bounded organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0043231
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0043231_Intracellular_membrane-bounded_organelle


id: GOCC:0043232
description: Intracellular non-membrane-bounded organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0043232
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0043232_Intracellular_non-membrane-bounded_organelle


id: GOCC:0043527
description: tRNA methyltransferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0043527
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0043527_tRNA_methyltransferase_complex


id: GOCC:0043590
description: Bacterial nucleoid
memo: https://amigo.geneontology.org/amigo/term/GO:0043590
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0043590_Bacterial_nucleoid


id: GOCC:0044391
description: Ribosomal subunit
memo: https://amigo.geneontology.org/amigo/term/GO:0044391
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0044391_Ribosomal_subunit


id: GOCC:0044815
description: DNA packaging complex
memo: https://amigo.geneontology.org/amigo/term/GO:0044815
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0044815_DNA_packaging_complex


id: GOCC:0045239
description: Tricarboxylic acid cycle enzyme complex
memo: https://amigo.geneontology.org/amigo/term/GO:0045239
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0045239_Tricarboxylic_acid_cycle_enzyme_complex


id: GOCC:0045254
description: Pyruvate dehydrogenase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0045254
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0045254_Pyruvate_dehydrogenase_complex


id: GOCC:0045259
description: Proton-transporting ATP synthase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0045259
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0045259_Proton-transporting_ATP_synthase_complex


id: GOCC:0045261
description: Proton-transporting ATP synthase complex, catalytic core F(1)
memo: https://amigo.geneontology.org/amigo/term/GO:0045261
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0045261_Proton-transporting_ATP_synthase_complex,_catalytic_core_F(1)


id: GOCC:0045263
description: Proton-transporting ATP synthase complex, coupling factor F(o)
memo: https://amigo.geneontology.org/amigo/term/GO:0045263
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0045263_Proton-transporting_ATP_synthase_complex,_coupling_factor_F(o)


id: GOCC:0045271
description: Respiratory chain complex I
memo: https://amigo.geneontology.org/amigo/term/GO:0045271
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0045271_Respiratory_chain_complex_I


id: GOCC:0046658
description: Anchored component of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0046658
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0046658_Anchored_component_of_plasma_membrane


id: GOCC:0046821
description: Extrachromosomal DNA
memo: https://amigo.geneontology.org/amigo/term/GO:0046821
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0046821_Extrachromosomal_DNA


id: GOCC:0048471
description: Perinuclear region of cytoplasm
memo: https://amigo.geneontology.org/amigo/term/GO:0048471
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0048471_Perinuclear_region_of_cytoplasm


id: GOCC:0048476
description: Holliday junction resolvase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0048476
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0048476_Holliday_junction_resolvase_complex


id: GOCC:0048500
description: Signal recognition particle
memo: https://amigo.geneontology.org/amigo/term/GO:0048500
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0048500_Signal_recognition_particle


id: GOCC:0061695
description: Transferase complex, transferring phosphorus-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0061695
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0061695_Transferase_complex,_transferring_phosphorus-containing_groups


id: GOCC:0062023
description: Collagen-containing extracellular matrix
memo: https://amigo.geneontology.org/amigo/term/GO:0062023
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0062023_Collagen-containing_extracellular_matrix


id: GOCC:0065010
description: Extracellular membrane-bounded organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0065010
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0065010_Extracellular_membrane-bounded_organelle


id: GOCC:0070013
description: Intracellular organelle lumen
memo: https://amigo.geneontology.org/amigo/term/GO:0070013
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0070013_Intracellular_organelle_lumen


id: GOCC:0070062
description: Extracellular exosome
memo: https://amigo.geneontology.org/amigo/term/GO:0070062
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0070062_Extracellular_exosome


id: GOCC:0070069
description: Cytochrome complex
memo: https://amigo.geneontology.org/amigo/term/GO:0070069
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0070069_Cytochrome_complex


id: GOCC:0070161
description: Anchoring junction
memo: https://amigo.geneontology.org/amigo/term/GO:0070161
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0070161_Anchoring_junction


id: GOCC:0070603
description: SWI/SNF superfamily-type complex
memo: https://amigo.geneontology.org/amigo/term/GO:0070603
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0070603_SWI/SNF_superfamily-type_complex


id: GOCC:0071513
description: Phosphopantothenoylcysteine decarboxylase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0071513
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0071513_Phosphopantothenoylcysteine_decarboxylase_complex


id: GOCC:0090734
description: Site of DNA damage
memo: https://amigo.geneontology.org/amigo/term/GO:0090734
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0090734_Site_of_DNA_damage


id: GOCC:0097346
description: INO80-type complex
memo: https://amigo.geneontology.org/amigo/term/GO:0097346
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0097346_INO80-type_complex


id: GOCC:0097708
description: Intracellular vesicle
memo: https://amigo.geneontology.org/amigo/term/GO:0097708
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0097708_Intracellular_vesicle


id: GOCC:0098533
description: ATPase dependent transmembrane transport complex
memo: https://amigo.geneontology.org/amigo/term/GO:0098533
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0098533_ATPase_dependent_transmembrane_transport_complex


id: GOCC:0098562
description: Cytoplasmic side of membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0098562
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0098562_Cytoplasmic_side_of_membrane


id: GOCC:0098573
description: Intrinsic component of mitochondrial membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0098573
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0098573_Intrinsic_component_of_mitochondrial_membrane


id: GOCC:0098588
description: Bounding membrane of organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0098588
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0098588_Bounding_membrane_of_organelle


id: GOCC:0098687
description: Chromosomal region
memo: https://amigo.geneontology.org/amigo/term/GO:0098687
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0098687_Chromosomal_region


id: GOCC:0098796
description: Membrane protein complex
memo: https://amigo.geneontology.org/amigo/term/GO:0098796
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0098796_Membrane_protein_complex


id: GOCC:0098797
description: Plasma membrane protein complex
memo: https://amigo.geneontology.org/amigo/term/GO:0098797
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0098797_Plasma_membrane_protein_complex


id: GOCC:0098798
description: Mitochondrial protein complex
memo: https://amigo.geneontology.org/amigo/term/GO:0098798
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0098798_Mitochondrial_protein_complex


id: GOCC:0098800
description: Inner mitochondrial membrane protein complex
memo: https://amigo.geneontology.org/amigo/term/GO:0098800
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0098800_Inner_mitochondrial_membrane_protein_complex


id: GOCC:0098803
description: Respiratory chain complex
memo: https://amigo.geneontology.org/amigo/term/GO:0098803
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0098803_Respiratory_chain_complex


id: GOCC:0098827
description: Endoplasmic reticulum subcompartment
memo: https://amigo.geneontology.org/amigo/term/GO:0098827
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0098827_Endoplasmic_reticulum_subcompartment


id: GOCC:0098852
description: Lytic vacuole membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0098852
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0098852_Lytic_vacuole_membrane


id: GOCC:0099023
description: Vesicle tethering complex
memo: https://amigo.geneontology.org/amigo/term/GO:0099023
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0099023_Vesicle_tethering_complex


id: GOCC:0099080
description: Supramolecular complex
memo: https://amigo.geneontology.org/amigo/term/GO:0099080
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0099080_Supramolecular_complex


id: GOCC:0101031
description: Chaperone complex
memo: https://amigo.geneontology.org/amigo/term/GO:0101031
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0101031_Chaperone_complex


id: GOCC:0110165
description: Cellular anatomical entity
memo: https://amigo.geneontology.org/amigo/term/GO:0110165
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0110165_Cellular_anatomical_entity


id: GOCC:0120025
description: Plasma membrane bounded cell projection
memo: https://amigo.geneontology.org/amigo/term/GO:0120025
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:0120025_Plasma_membrane_bounded_cell_projection


id: GOCC:1902494
description: Catalytic complex
memo: https://amigo.geneontology.org/amigo/term/GO:1902494
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:1902494_Catalytic_complex


id: GOCC:1902495
description: Transmembrane transporter complex
memo: https://amigo.geneontology.org/amigo/term/GO:1902495
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:1902495_Transmembrane_transporter_complex


id: GOCC:1902555
description: Endoribonuclease complex
memo: https://amigo.geneontology.org/amigo/term/GO:1902555
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:1902555_Endoribonuclease_complex


id: GOCC:1902560
description: GMP reductase complex
memo: https://amigo.geneontology.org/amigo/term/GO:1902560
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:1902560_GMP_reductase_complex


id: GOCC:1903293
description: Phosphatase complex
memo: https://amigo.geneontology.org/amigo/term/GO:1903293
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:1903293_Phosphatase_complex


id: GOCC:1903561
description: Extracellular vesicle
memo: https://amigo.geneontology.org/amigo/term/GO:1903561
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:1903561_Extracellular_vesicle


id: GOCC:1905347
description: Endodeoxyribonuclease complex
memo: https://amigo.geneontology.org/amigo/term/GO:1905347
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:1905347_Endodeoxyribonuclease_complex


id: GOCC:1905348
description: Endonuclease complex
memo: https://amigo.geneontology.org/amigo/term/GO:1905348
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:1905348_Endonuclease_complex


id: GOCC:1905368
description: Peptidase complex
memo: https://amigo.geneontology.org/amigo/term/GO:1905368
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:1905368_Peptidase_complex


id: GOCC:1905369
description: Endopeptidase complex
memo: https://amigo.geneontology.org/amigo/term/GO:1905369
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:1905369_Endopeptidase_complex


id: GOCC:1990077
description: Primosome complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990077
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:1990077_Primosome_complex


id: GOCC:1990204
description: Oxidoreductase complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990204
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:1990204_Oxidoreductase_complex


id: GOCC:1990220
description: GroEL-GroES complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990220
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:1990220_GroEL-GroES_complex


id: GOCC:1990221
description: L-cysteine desulfurase complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990221
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:1990221_L-cysteine_desulfurase_complex


id: GOCC:1990228
description: Sulfurtransferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990228
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:1990228_Sulfurtransferase_complex


id: GOCC:1990229
description: Iron-sulfur cluster assembly complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990229
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:1990229_Iron-sulfur_cluster_assembly_complex


id: GOCC:1990234
description: Transferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990234
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:1990234_Transferase_complex


id: GOCC:1990330
description: IscS-IscU complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990330
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:1990330_IscS-IscU_complex


id: GOCC:1990351
description: Transporter complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990351
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:1990351_Transporter_complex


id: GOCC:1990391
description: DNA repair complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990391
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:1990391_DNA_repair_complex


id: GOCC:1990904
description: Ribonucleoprotein complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990904
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1423814_STRINGid_GOCC:1990904_Ribonucleoprotein_complex


id: IPR000032
description: Phosphocarrier protein HPr-like
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000032
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000032_Phosphocarrier_protein_HPr-like


id: IPR000037
description: SsrA-binding protein
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000037
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000037_SsrA-binding_protein


id: IPR000055
description: Type I restriction modification DNA specificity domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000055
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000055_Type_I_restriction_modification_DNA_specificity_domain


id: IPR000056
description: Ribulose-phosphate 3-epimerase-like
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000056
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000056_Ribulose-phosphate_3-epimerase-like


id: IPR000060
description: BCCT transporter family
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000060
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000060_BCCT_transporter_family


id: IPR000064
description: Endopeptidase, NLPC/P60 domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000064
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000064_Endopeptidase,_NLPC/P60_domain


id: IPR000073
description: Alpha/beta hydrolase fold-1
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000073
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000073_Alpha/beta_hydrolase_fold-1


id: IPR000085
description: Bacterial DNA recombination protein RuvA
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000085
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000085_Bacterial_DNA_recombination_protein_RuvA


id: IPR000086
description: NUDIX hydrolase domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000086
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000086_NUDIX_hydrolase_domain


id: IPR000089
description: Biotin/lipoyl attachment
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000089
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000089_Biotin/lipoyl_attachment


id: IPR000092
description: Polyprenyl synthetase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000092
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000092_Polyprenyl_synthetase


id: IPR000093
description: DNA recombination protein RecR
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000093
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000093_DNA_recombination_protein_RecR


id: IPR000109
description: Proton-dependent oligopeptide transporter family
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000109
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000109_Proton-dependent_oligopeptide_transporter_family


id: IPR000111
description: Glycoside hydrolase family 27/36, conserved site
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000111
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000111_Glycoside_hydrolase_family_27/36,_conserved_site


id: IPR000114
description: Ribosomal protein L16
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000114
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000114_Ribosomal_protein_L16


id: IPR000115
description: Phosphoribosylglycinamide synthetase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000115
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000115_Phosphoribosylglycinamide_synthetase


id: IPR000119
description: Histone-like DNA-binding protein
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000119
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000119_Histone-like_DNA-binding_protein


id: IPR000121
description: PEP-utilising enzyme, C-terminal
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000121
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000121_PEP-utilising_enzyme,_C-terminal


id: IPR000123
description: RNA-directed DNA polymerase (reverse transcriptase), msDNA
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000123
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000123_RNA-directed_DNA_polymerase_(reverse_transcriptase),_msDNA


id: IPR000131
description: ATP synthase, F1 complex, gamma subunit
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000131
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000131_ATP_synthase,_F1_complex,_gamma_subunit


id: IPR000158
description: Cell division protein FtsZ
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000158
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000158_Cell_division_protein_FtsZ


id: IPR000169
description: Cysteine peptidase, cysteine active site
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000169
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000169_Cysteine_peptidase,_cysteine_active_site


id: IPR000178
description: Translation initiation factor IF-2, bacterial-like
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000178
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000178_Translation_initiation_factor_IF-2,_bacterial-like


id: IPR000183
description: Ornithine/DAP/Arg decarboxylase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000183
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000183_Ornithine/DAP/Arg_decarboxylase


id: IPR000185
description: Protein translocase subunit SecA
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000185
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000185_Protein_translocase_subunit_SecA


id: IPR000192
description: Aminotransferase class V domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000192
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000192_Aminotransferase_class_V_domain


id: IPR000194
description: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000194
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000194_ATPase,_F1/V1/A1_complex,_alpha/beta_subunit,_nucleotide-binding_domain


id: IPR000206
description: Ribosomal protein L7/L12
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000206
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000206_Ribosomal_protein_L7/L12


id: IPR000212
description: DNA helicase, UvrD/REP type
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000212
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000212_DNA_helicase,_UvrD/REP_type


id: IPR000214
description: Zinc finger, DNA glycosylase/AP lyase-type
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000214
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000214_Zinc_finger,_DNA_glycosylase/AP_lyase-type


id: IPR000218
description: Ribosomal protein L14P
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000218
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000218_Ribosomal_protein_L14P


id: IPR000223
description: Peptidase S26A, signal peptidase I
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000223
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000223_Peptidase_S26A,_signal_peptidase_I


id: IPR000235
description: Ribosomal protein S5/S7
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000235
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000235_Ribosomal_protein_S5/S7


id: IPR000238
description: Ribosome-binding factor A
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000238
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000238_Ribosome-binding_factor_A


id: IPR000241
description: Ribosomal RNA large subunit methyltransferase K/L-like, FLD domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000241
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000241_Ribosomal_RNA_large_subunit_methyltransferase_K/L-like,_FLD_domain


id: IPR000244
description: Ribosomal protein L9
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000244
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000244_Ribosomal_protein_L9


id: IPR000257
description: Uroporphyrinogen decarboxylase (URO-D)
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000257
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000257_Uroporphyrinogen_decarboxylase_(URO-D)


id: IPR000262
description: FMN-dependent dehydrogenase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000262
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000262_FMN-dependent_dehydrogenase


id: IPR000266
description: Ribosomal protein S17/S11
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000266
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000266_Ribosomal_protein_S17/S11


id: IPR000271
description: Ribosomal protein L34
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000271
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000271_Ribosomal_protein_L34


id: IPR000277
description: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000277
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000277_Cys/Met_metabolism,_pyridoxal_phosphate-dependent_enzyme


id: IPR000291
description: D-alanine--D-alanine ligase/VANA/B/C, conserved site
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000291
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000291_D-alanine--D-alanine_ligase/VANA/B/C,_conserved_site


id: IPR000297
description: Peptidyl-prolyl cis-trans isomerase, PpiC-type
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000297
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000297_Peptidyl-prolyl_cis-trans_isomerase,_PpiC-type


id: IPR000304
description: Pyrroline-5-carboxylate reductase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000304
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000304_Pyrroline-5-carboxylate_reductase


id: IPR000305
description: GIY-YIG endonuclease
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000305
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000305_GIY-YIG_endonuclease


id: IPR000307
description: Ribosomal protein S16
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000307
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000307_Ribosomal_protein_S16


id: IPR000326
description: Phosphatidic acid phosphatase type 2/haloperoxidase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000326
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000326_Phosphatidic_acid_phosphatase_type_2/haloperoxidase


id: IPR000352
description: Peptide chain release factor class I
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000352
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000352_Peptide_chain_release_factor_class_I


id: IPR000358
description: Ribonucleotide reductase small subunit family
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000358
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000358_Ribonucleotide_reductase_small_subunit_family


id: IPR000361
description: FeS cluster biogenesis
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000361
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000361_FeS_cluster_biogenesis


id: IPR000362
description: Fumarate lyase family
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000362
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000362_Fumarate_lyase_family


id: IPR000374
description: Phosphatidate cytidylyltransferase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000374
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000374_Phosphatidate_cytidylyltransferase


id: IPR000380
description: DNA topoisomerase, type IA
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000380
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000380_DNA_topoisomerase,_type_IA


id: IPR000383
description: Xaa-Pro dipeptidyl-peptidase-like domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000383
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000383_Xaa-Pro_dipeptidyl-peptidase-like_domain


id: IPR000397
description: Heat shock protein Hsp33
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000397
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000397_Heat_shock_protein_Hsp33


id: IPR000398
description: Thymidylate synthase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000398
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000398_Thymidylate_synthase


id: IPR000417
description: Hydroxyethylthiazole kinase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000417
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000417_Hydroxyethylthiazole_kinase


id: IPR000424
description: Primosome PriB/single-strand DNA-binding
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000424
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000424_Primosome_PriB/single-strand_DNA-binding


id: IPR000425
description: Major intrinsic protein
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000425
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000425_Major_intrinsic_protein


id: IPR000432
description: DNA mismatch repair protein MutS, C-terminal
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000432
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000432_DNA_mismatch_repair_protein_MutS,_C-terminal


id: IPR000438
description: Acetyl-CoA carboxylase carboxyl transferase, beta subunit
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000438
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000438_Acetyl-CoA_carboxylase_carboxyl_transferase,_beta_subunit


id: IPR000445
description: Helix-hairpin-helix motif
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000445
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000445_Helix-hairpin-helix_motif


id: IPR000454
description: ATP synthase, F0 complex, subunit C
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000454
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000454_ATP_synthase,_F0_complex,_subunit_C


id: IPR000456
description: Ribosomal protein L17
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000456
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000456_Ribosomal_protein_L17


id: IPR000462
description: CDP-alcohol phosphatidyltransferase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000462
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000462_CDP-alcohol_phosphatidyltransferase


id: IPR000473
description: Ribosomal protein L36
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000473
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000473_Ribosomal_protein_L36


id: IPR000477
description: Reverse transcriptase domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000477
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000477_Reverse_transcriptase_domain


id: IPR000485
description: AsnC-type HTH domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000485
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000485_AsnC-type_HTH_domain


id: IPR000515
description: ABC transporter type 1, transmembrane domain MetI-like
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000515
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000515_ABC_transporter_type_1,_transmembrane_domain_MetI-like


id: IPR000524
description: Transcription regulator HTH, GntR
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000524
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000524_Transcription_regulator_HTH,_GntR


id: IPR000529
description: Ribosomal protein S6
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000529
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000529_Ribosomal_protein_S6


id: IPR000534
description: Semialdehyde dehydrogenase, NAD-binding
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000534
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000534_Semialdehyde_dehydrogenase,_NAD-binding


id: IPR000537
description: UbiA prenyltransferase family
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000537
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000537_UbiA_prenyltransferase_family


id: IPR000551
description: MerR-type HTH domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000551
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000551_MerR-type_HTH_domain


id: IPR000559
description: Formate-tetrahydrofolate ligase, FTHFS
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000559
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000559_Formate-tetrahydrofolate_ligase,_FTHFS


id: IPR000565
description: DNA topoisomerase, type IIA, subunit B
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000565
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000565_DNA_topoisomerase,_type_IIA,_subunit_B


id: IPR000568
description: ATP synthase, F0 complex, subunit A
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000568
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000568_ATP_synthase,_F0_complex,_subunit_A


id: IPR000577
description: Carbohydrate kinase, FGGY
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000577
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000577_Carbohydrate_kinase,_FGGY


id: IPR000587
description: Creatinase, N-terminal
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000587
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000587_Creatinase,_N-terminal


id: IPR000589
description: Ribosomal protein S15
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000589
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000589_Ribosomal_protein_S15


id: IPR000595
description: Cyclic nucleotide-binding domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000595
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000595_Cyclic_nucleotide-binding_domain


id: IPR000597
description: Ribosomal protein L3
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000597
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000597_Ribosomal_protein_L3


id: IPR000629
description: ATP-dependent RNA helicase DEAD-box, conserved site
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000629
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000629_ATP-dependent_RNA_helicase_DEAD-box,_conserved_site


id: IPR000630
description: Ribosomal protein S8
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000630
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000630_Ribosomal_protein_S8


id: IPR000631
description: ATP/ADP-dependent (S)-NAD(P)H-hydrate dehydratase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000631
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000631_ATP/ADP-dependent_(S)-NAD(P)H-hydrate_dehydratase


id: IPR000634
description: Serine/threonine dehydratase, pyridoxal-phosphate-binding site
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000634
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000634_Serine/threonine_dehydratase,_pyridoxal-phosphate-binding_site


id: IPR000640
description: Elongation factor EFG, domain V-like
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000640
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000640_Elongation_factor_EFG,_domain_V-like


id: IPR000652
description: Triosephosphate isomerase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000652
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000652_Triosephosphate_isomerase


id: IPR000672
description: Tetrahydrofolate dehydrogenase/cyclohydrolase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000672
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000672_Tetrahydrofolate_dehydrogenase/cyclohydrolase


id: IPR000683
description: Gfo/Idh/MocA-like oxidoreductase, N-terminal
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000683
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000683_Gfo/Idh/MocA-like_oxidoreductase,_N-terminal


id: IPR000700
description: PAS-associated, C-terminal
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000700
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000700_PAS-associated,_C-terminal


id: IPR000702
description: Ribosomal protein L6
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000702
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000702_Ribosomal_protein_L6


id: IPR000711
description: ATPase, OSCP/delta subunit
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000711
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000711_ATPase,_OSCP/delta_subunit


id: IPR000713
description: Mur ligase, N-terminal catalytic domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000713
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000713_Mur_ligase,_N-terminal_catalytic_domain


id: IPR000715
description: Glycosyl transferase, family 4
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000715
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000715_Glycosyl_transferase,_family_4


id: IPR000719
description: Protein kinase domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000719
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000719_Protein_kinase_domain


id: IPR000722
description: RNA polymerase, alpha subunit
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000722
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000722_RNA_polymerase,_alpha_subunit


id: IPR000731
description: Sterol-sensing domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000731
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000731_Sterol-sensing_domain


id: IPR000740
description: GrpE nucleotide exchange factor
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000740
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000740_GrpE_nucleotide_exchange_factor


id: IPR000748
description: Pseudouridine synthase, RsuA/RluB/E/F
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000748
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000748_Pseudouridine_synthase,_RsuA/RluB/E/F


id: IPR000754
description: Ribosomal protein S9
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000754
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000754_Ribosomal_protein_S9


id: IPR000760
description: Inositol monophosphatase-like
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000760
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000760_Inositol_monophosphatase-like


id: IPR000766
description: Galactose-1-phosphate uridyl transferase, class II
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000766
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000766_Galactose-1-phosphate_uridyl_transferase,_class_II


id: IPR000788
description: Ribonucleotide reductase large subunit, C-terminal
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000788
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000788_Ribonucleotide_reductase_large_subunit,_C-terminal


id: IPR000793
description: ATP synthase, alpha subunit, C-terminal
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000793
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000793_ATP_synthase,_alpha_subunit,_C-terminal


id: IPR000794
description: Beta-ketoacyl synthase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000794
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000794_Beta-ketoacyl_synthase


id: IPR000795
description: Translational (tr)-type GTP-binding domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000795
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000795_Translational_(tr)-type_GTP-binding_domain


id: IPR000825
description: SUF system FeS cluster assembly, SufBD
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000825
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000825_SUF_system_FeS_cluster_assembly,_SufBD


id: IPR000835
description: MarR-type HTH domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000835
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000835_MarR-type_HTH_domain


id: IPR000836
description: Phosphoribosyltransferase domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000836
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000836_Phosphoribosyltransferase_domain


id: IPR000842
description: Phosphoribosyl pyrophosphate synthetase, conserved site
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000842
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000842_Phosphoribosyl_pyrophosphate_synthetase,_conserved_site


id: IPR000843
description: LacI-type HTH domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000843
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000843_LacI-type_HTH_domain


id: IPR000845
description: Nucleoside phosphorylase domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000845
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000845_Nucleoside_phosphorylase_domain


id: IPR000846
description: Dihydrodipicolinate reductase, N-terminal
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000846
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000846_Dihydrodipicolinate_reductase,_N-terminal


id: IPR000847
description: Transcription regulator HTH, LysR
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000847
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000847_Transcription_regulator_HTH,_LysR


id: IPR000849
description: Sugar phosphate transporter
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000849
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000849_Sugar_phosphate_transporter


id: IPR000850
description: Adenylate kinase/UMP-CMP kinase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000850
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000850_Adenylate_kinase/UMP-CMP_kinase


id: IPR000851
description: Ribosomal protein S5
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000851
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000851_Ribosomal_protein_S5


id: IPR000866
description: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000866
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000866_Alkyl_hydroperoxide_reductase_subunit_C/_Thiol_specific_antioxidant


id: IPR000868
description: Isochorismatase-like
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000868
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000868_Isochorismatase-like


id: IPR000871
description: Beta-lactamase, class-A
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000871
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000871_Beta-lactamase,_class-A


id: IPR000873
description: AMP-dependent synthetase/ligase domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000873
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000873_AMP-dependent_synthetase/ligase_domain


id: IPR000878
description: Tetrapyrrole methylase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000878
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000878_Tetrapyrrole_methylase


id: IPR000890
description: Aliphatic acid kinase, short-chain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000890
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000890_Aliphatic_acid_kinase,_short-chain


id: IPR000897
description: Signal recognition particle, SRP54 subunit, GTPase domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000897
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000897_Signal_recognition_particle,_SRP54_subunit,_GTPase_domain


id: IPR000911
description: Ribosomal protein L11/L12
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000911
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000911_Ribosomal_protein_L11/L12


id: IPR000917
description: Sulfatase, N-terminal
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000917
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000917_Sulfatase,_N-terminal


id: IPR000924
description: Glutamyl/glutaminyl-tRNA synthetase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000924
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000924_Glutamyl/glutaminyl-tRNA_synthetase


id: IPR000943
description: RNA polymerase sigma-70
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000943
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000943_RNA_polymerase_sigma-70


id: IPR000944
description: Transcription regulator Rrf2
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000944
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000944_Transcription_regulator_Rrf2


id: IPR000979
description: Phosphodiesterase MJ0936/Vps29
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000979
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000979_Phosphodiesterase_MJ0936/Vps29


id: IPR000983
description: Bacterial general secretion pathway protein G-type pilin
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000983
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000983_Bacterial_general_secretion_pathway_protein_G-type_pilin


id: IPR000999
description: Ribonuclease III domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000999
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR000999_Ribonuclease_III_domain


id: IPR001001
description: DNA polymerase III, beta sliding clamp
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001001
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001001_DNA_polymerase_III,_beta_sliding_clamp


id: IPR001014
description: Ribosomal protein L23/L25, conserved site
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001014
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001014_Ribosomal_protein_L23/L25,_conserved_site


id: IPR001017
description: Dehydrogenase, E1 component
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001017
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001017_Dehydrogenase,_E1_component


id: IPR001020
description: Phosphotransferase system, HPr histidine phosphorylation site
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001020
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001020_Phosphotransferase_system,_HPr_histidine_phosphorylation_site


id: IPR001048
description: Aspartate/glutamate/uridylate kinase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001048
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001048_Aspartate/glutamate/uridylate_kinase


id: IPR001057
description: Glutamate/acetylglutamate kinase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001057
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001057_Glutamate/acetylglutamate_kinase


id: IPR001059
description: Translation elongation factor P/YeiP, central
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001059
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001059_Translation_elongation_factor_P/YeiP,_central


id: IPR001062
description: Transcription antitermination protein, NusG
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001062
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001062_Transcription_antitermination_protein,_NusG


id: IPR001063
description: Ribosomal protein L22/L17
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001063
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001063_Ribosomal_protein_L22/L17


id: IPR001078
description: 2-oxoacid dehydrogenase acyltransferase, catalytic domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001078
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001078_2-oxoacid_dehydrogenase_acyltransferase,_catalytic_domain


id: IPR001085
description: Serine hydroxymethyltransferase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001085
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001085_Serine_hydroxymethyltransferase


id: IPR001091
description: Restriction/modification DNA-methyltransferase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001091
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001091_Restriction/modification_DNA-methyltransferase


id: IPR001093
description: IMP dehydrogenase/GMP reductase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001093
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001093_IMP_dehydrogenase/GMP_reductase


id: IPR001095
description: Acetyl-CoA carboxylase, alpha subunit
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001095
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001095_Acetyl-CoA_carboxylase,_alpha_subunit


id: IPR001098
description: DNA-directed DNA polymerase, family A, palm domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001098
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001098_DNA-directed_DNA_polymerase,_family_A,_palm_domain


id: IPR001100
description: Pyridine nucleotide-disulphide oxidoreductase, class I
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001100
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001100_Pyridine_nucleotide-disulphide_oxidoreductase,_class_I


id: IPR001114
description: Adenylosuccinate synthetase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001114
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001114_Adenylosuccinate_synthetase


id: IPR001127
description: Phosphotransferase system, sugar-specific permease EIIA type 1
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001127
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001127_Phosphotransferase_system,_sugar-specific_permease_EIIA_type_1


id: IPR001130
description: 3-5 ssDNA/RNA exonuclease TatD-like
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001130
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001130_3-5_ssDNA/RNA_exonuclease_TatD-like


id: IPR001131
description: Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001131
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001131_Peptidase_M24B,_X-Pro_dipeptidase/aminopeptidase_P,_conserved_site


id: IPR001150
description: Glycine radical domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001150
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001150_Glycine_radical_domain


id: IPR001155
description: NADH:flavin oxidoreductase/NADH oxidase, N-terminal
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001155
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001155_NADH:flavin_oxidoreductase/NADH_oxidase,_N-terminal


id: IPR001162
description: UvrC, RNAse H endonuclease domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001162
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001162_UvrC,_RNAse_H_endonuclease_domain


id: IPR001173
description: Glycosyltransferase 2-like
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001173
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001173_Glycosyltransferase_2-like


id: IPR001179
description: FKBP-type peptidyl-prolyl cis-trans isomerase domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001179
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001179_FKBP-type_peptidyl-prolyl_cis-trans_isomerase_domain


id: IPR001182
description: Probable peptidoglycan glycosyltransferase FtsW/RodA
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001182
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001182_Probable_peptidoglycan_glycosyltransferase_FtsW/RodA


id: IPR001185
description: Large-conductance mechanosensitive channel
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001185
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001185_Large-conductance_mechanosensitive_channel


id: IPR001188
description: Spermidine/putrescine-binding periplasmic protein
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001188
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001188_Spermidine/putrescine-binding_periplasmic_protein


id: IPR001196
description: Ribosomal protein L15, conserved site
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001196
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001196_Ribosomal_protein_L15,_conserved_site


id: IPR001199
description: Cytochrome b5-like heme/steroid binding domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001199
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001199_Cytochrome_b5-like_heme/steroid_binding_domain


id: IPR001206
description: Diacylglycerol kinase, catalytic domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001206
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001206_Diacylglycerol_kinase,_catalytic_domain


id: IPR001209
description: Ribosomal protein S14
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001209
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001209_Ribosomal_protein_S14


id: IPR001226
description: Flavodoxin, conserved site
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001226
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001226_Flavodoxin,_conserved_site


id: IPR001227
description: Acyl transferase domain superfamily
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001227
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001227_Acyl_transferase_domain_superfamily


id: IPR001236
description: Lactate/malate dehydrogenase, N-terminal
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001236
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001236_Lactate/malate_dehydrogenase,_N-terminal


id: IPR001241
description: DNA topoisomerase, type IIA
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001241
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001241_DNA_topoisomerase,_type_IIA


id: IPR001248
description: Purine-cytosine permease
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001248
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001248_Purine-cytosine_permease


id: IPR001249
description: Acetyl-CoA biotin carboxyl carrier
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001249
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001249_Acetyl-CoA_biotin_carboxyl_carrier


id: IPR001250
description: Mannose-6-phosphate isomerase, type I
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001250
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001250_Mannose-6-phosphate_isomerase,_type_I


id: IPR001261
description: ArgE/DapE/ACY1/CPG2/YscS, conserved site
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001261
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001261_ArgE/DapE/ACY1/CPG2/YscS,_conserved_site


id: IPR001264
description: Glycosyl transferase, family 51
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001264
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001264_Glycosyl_transferase,_family_51


id: IPR001269
description: tRNA-dihydrouridine synthase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001269
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001269_tRNA-dihydrouridine_synthase


id: IPR001278
description: Arginine-tRNA ligase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001278
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001278_Arginine-tRNA_ligase


id: IPR001279
description: Metallo-beta-lactamase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001279
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001279_Metallo-beta-lactamase


id: IPR001282
description: Glucose-6-phosphate dehydrogenase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001282
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001282_Glucose-6-phosphate_dehydrogenase


id: IPR001288
description: Translation initiation factor 3
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001288
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001288_Translation_initiation_factor_3


id: IPR001295
description: Dihydroorotate dehydrogenase, conserved site
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001295
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001295_Dihydroorotate_dehydrogenase,_conserved_site


id: IPR001296
description: Glycosyl transferase, family 1
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001296
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001296_Glycosyl_transferase,_family_1


id: IPR001305
description: Heat shock protein DnaJ, cysteine-rich domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001305
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001305_Heat_shock_protein_DnaJ,_cysteine-rich_domain


id: IPR001310
description: Histidine triad (HIT) protein
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001310
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001310_Histidine_triad_(HIT)_protein


id: IPR001320
description: Ionotropic glutamate receptor, C-terminal
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001320
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001320_Ionotropic_glutamate_receptor,_C-terminal


id: IPR001328
description: Peptidyl-tRNA hydrolase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001328
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001328_Peptidyl-tRNA_hydrolase


id: IPR001342
description: Homoserine dehydrogenase, catalytic
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001342
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001342_Homoserine_dehydrogenase,_catalytic


id: IPR001345
description: Phosphoglycerate/bisphosphoglycerate mutase, active site
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001345
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001345_Phosphoglycerate/bisphosphoglycerate_mutase,_active_site


id: IPR001351
description: Ribosomal protein S3, C-terminal
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001351
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001351_Ribosomal_protein_S3,_C-terminal


id: IPR001352
description: Ribonuclease HII/HIII
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001352
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001352_Ribonuclease_HII/HIII


id: IPR001367
description: Iron dependent repressor, metal binding and dimerisation domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001367
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001367_Iron_dependent_repressor,_metal_binding_and_dimerisation_domain


id: IPR001383
description: Ribosomal protein L28
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001383
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001383_Ribosomal_protein_L28


id: IPR001387
description: Cro/C1-type helix-turn-helix domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001387
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001387_Cro/C1-type_helix-turn-helix_domain


id: IPR001405
description: Uncharacterised protein family UPF0758
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001405
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001405_Uncharacterised_protein_family_UPF0758


id: IPR001406
description: Pseudouridine synthase I, TruA
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001406
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001406_Pseudouridine_synthase_I,_TruA


id: IPR001412
description: Aminoacyl-tRNA synthetase, class I, conserved site
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001412
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001412_Aminoacyl-tRNA_synthetase,_class_I,_conserved_site


id: IPR001437
description: Transcription elongation factor, GreA/GreB, C-terminal
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001437
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001437_Transcription_elongation_factor,_GreA/GreB,_C-terminal


id: IPR001441
description: Decaprenyl diphosphate synthase-like
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001441
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001441_Decaprenyl_diphosphate_synthase-like


id: IPR001460
description: Penicillin-binding protein, transpeptidase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001460
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001460_Penicillin-binding_protein,_transpeptidase


id: IPR001466
description: Beta-lactamase-related
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001466
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001466_Beta-lactamase-related


id: IPR001469
description: ATP synthase, F1 complex, delta/epsilon subunit
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001469
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001469_ATP_synthase,_F1_complex,_delta/epsilon_subunit


id: IPR001482
description: Type II/IV secretion system protein
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001482
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001482_Type_II/IV_secretion_system_protein


id: IPR001518
description: Argininosuccinate synthase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001518
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001518_Argininosuccinate_synthase


id: IPR001537
description: tRNA/rRNA methyltransferase, SpoU type
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001537
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001537_tRNA/rRNA_methyltransferase,_SpoU_type


id: IPR001555
description: Phosphoribosylglycinamide formyltransferase, active site
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001555
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001555_Phosphoribosylglycinamide_formyltransferase,_active_site


id: IPR001557
description: L-lactate/malate dehydrogenase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001557
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001557_L-lactate/malate_dehydrogenase


id: IPR001564
description: Nucleoside diphosphate kinase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001564
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001564_Nucleoside_diphosphate_kinase


id: IPR001576
description: Phosphoglycerate kinase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001576
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001576_Phosphoglycerate_kinase


id: IPR001584
description: Integrase, catalytic core
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001584
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001584_Integrase,_catalytic_core


id: IPR001604
description: DNA/RNA non-specific endonuclease
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001604
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001604_DNA/RNA_non-specific_endonuclease


id: IPR001608
description: Alanine racemase, N-terminal
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001608
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001608_Alanine_racemase,_N-terminal


id: IPR001626
description: ABC transporter, TroCD-like
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001626
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001626_ABC_transporter,_TroCD-like


id: IPR001636
description: Phosphoribosylaminoimidazole-succinocarboxamide synthase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001636
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001636_Phosphoribosylaminoimidazole-succinocarboxamide_synthase


id: IPR001638
description: Solute-binding protein family 3/N-terminal domain of MltF
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001638
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001638_Solute-binding_protein_family_3/N-terminal_domain_of_MltF


id: IPR001640
description: Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase Lgt
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001640
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001640_Phosphatidylglycerol--prolipoprotein_diacylglyceryl_transferase_Lgt


id: IPR001645
description: Folylpolyglutamate synthetase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001645
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001645_Folylpolyglutamate_synthetase


id: IPR001647
description: DNA-binding HTH domain, TetR-type
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001647
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001647_DNA-binding_HTH_domain,_TetR-type


id: IPR001648
description: Ribosomal protein S18
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001648
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001648_Ribosomal_protein_S18


id: IPR001650
description: Helicase, C-terminal
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001650
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001650_Helicase,_C-terminal


id: IPR001653
description: Diaminopimelate epimerase, DapF
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001653
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001653_Diaminopimelate_epimerase,_DapF


id: IPR001670
description: Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001670
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001670_Alcohol_dehydrogenase,_iron-type/glycerol_dehydrogenase_GldA


id: IPR001672
description: Phosphoglucose isomerase (PGI)
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001672
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001672_Phosphoglucose_isomerase_(PGI)


id: IPR001674
description: GMP synthase, C-terminal
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001674
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001674_GMP_synthase,_C-terminal


id: IPR001678
description: SAM-dependent methyltransferase RsmB/NOP2-type
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001678
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001678_SAM-dependent_methyltransferase_RsmB/NOP2-type


id: IPR001679
description: NAD-dependent DNA ligase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001679
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001679_NAD-dependent_DNA_ligase


id: IPR001684
description: Ribosomal protein L27
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001684
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001684_Ribosomal_protein_L27


id: IPR001705
description: Ribosomal protein L33
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001705
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001705_Ribosomal_protein_L33


id: IPR001706
description: Ribosomal protein L35, non-mitochondrial
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001706
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001706_Ribosomal_protein_L35,_non-mitochondrial


id: IPR001708
description: Membrane insertase YidC/ALB3/OXA1/COX18
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001708
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001708_Membrane_insertase_YidC/ALB3/OXA1/COX18


id: IPR001714
description: Peptidase M24, methionine aminopeptidase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001714
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001714_Peptidase_M24,_methionine_aminopeptidase


id: IPR001736
description: Phospholipase D/Transphosphatidylase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001736
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001736_Phospholipase_D/Transphosphatidylase


id: IPR001737
description: Ribosomal RNA adenine methyltransferase KsgA/Erm
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001737
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001737_Ribosomal_RNA_adenine_methyltransferase_KsgA/Erm


id: IPR001753
description: Enoyl-CoA hydratase/isomerase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001753
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001753_Enoyl-CoA_hydratase/isomerase


id: IPR001754
description: Orotidine 5-phosphate decarboxylase domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001754
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001754_Orotidine_5-phosphate_decarboxylase_domain


id: IPR001761
description: Periplasmic binding protein/LacI sugar binding domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001761
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1423814_STRINGid_IPR001761_Periplasmic_binding_protein/LacI_sugar_binding_domain


