# geneInfo

ensembl_gene_id: SAMN02745118_00005
symbol: gyrB
gene_biotype: protein_coding
description:
  DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: SAMN02745118_00007
symbol: cheB
gene_biotype: protein_coding
description:
  Two-component system, chemotaxis family, response regulator CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.


ensembl_gene_id: SAMN02745118_00012
symbol: SJZ30223.1
gene_biotype: protein_coding
description:
  Predicted component of the ribosome quality control (RQC) complex, YloA/Tae2 family, contains fibronectin-binding (FbpA) and DUF814 domains.


ensembl_gene_id: SAMN02745118_00016
symbol: SJZ30244.1
gene_biotype: protein_coding
description:
  Hydrophobic/amphiphilic exporter-1, HAE1 family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: SAMN02745118_00017
symbol: SJZ30248.1
gene_biotype: protein_coding
description:
  RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: SAMN02745118_00024
symbol: coaD
gene_biotype: protein_coding
description:
  Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.


ensembl_gene_id: SAMN02745118_00026
symbol: recG
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.


ensembl_gene_id: SAMN02745118_00037
symbol: SJZ30319.1
gene_biotype: protein_coding
description:
  methylmalonyl-CoA mutase C-terminal domain-containing protein/methyltransferase cognate corrinoid proteins.


ensembl_gene_id: SAMN02745118_00056
symbol: gcvPB
gene_biotype: protein_coding
description:
  Glycine dehydrogenase (decarboxylating) beta subunit; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. C-terminal subunit subfamily.


ensembl_gene_id: SAMN02745118_00057
symbol: gcvPA
gene_biotype: protein_coding
description:
  Glycine dehydrogenase (decarboxylating) alpha subunit; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein.


ensembl_gene_id: SAMN02745118_00058
symbol: gcvH
gene_biotype: protein_coding
description:
  Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.


ensembl_gene_id: SAMN02745118_00091
symbol: ileS
gene_biotype: protein_coding
description:
  Isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily.


ensembl_gene_id: SAMN02745118_00093
symbol: SJZ30618.1
gene_biotype: protein_coding
description:
  Adenosylhomocysteine nucleosidase; Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'- methylthioribose and S-ribosylhomocysteine, respectively. Belongs to the PNP/UDP phosphorylase family. MtnN subfamily.


ensembl_gene_id: SAMN02745118_00097
symbol: proC
gene_biotype: protein_coding
description:
  Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.


ensembl_gene_id: SAMN02745118_00098
symbol: SJZ30659.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.


ensembl_gene_id: SAMN02745118_00102
symbol: pstB
gene_biotype: protein_coding
description:
  Phosphate ABC transporter ATP-binding protein, PhoT family; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.


ensembl_gene_id: SAMN02745118_00104
symbol: SJZ30697.1
gene_biotype: protein_coding
description:
  Phosphate ABC transporter membrane protein 1, PhoT family (TC 3.A.1.7.1); Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: SAMN02745118_00124
symbol: SJZ30809.1
gene_biotype: protein_coding
description:
  Transcriptional regulator, CopG family; Transcriptional regulator; Belongs to the transcriptional regulatory CopG/NikR family.


ensembl_gene_id: SAMN02745118_00127
symbol: ribH
gene_biotype: protein_coding
description:
  6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.


ensembl_gene_id: SAMN02745118_00128
symbol: ribBA
gene_biotype: protein_coding
description:
  3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.


ensembl_gene_id: SAMN02745118_00130
symbol: SJZ30864.1
gene_biotype: protein_coding
description:
  Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.


ensembl_gene_id: SAMN02745118_00133
symbol: rsgA
gene_biotype: protein_coding
description:
  Ribosome biogenesis GTPase; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.


ensembl_gene_id: SAMN02745118_00136
symbol: rlmN
gene_biotype: protein_coding
description:
  23S rRNA m(2)A-2503 methyltransferase; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family.


ensembl_gene_id: SAMN02745118_00137
symbol: SJZ30911.1
gene_biotype: protein_coding
description:
  NusB antitermination factor; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. Belongs to the NusB family.


ensembl_gene_id: SAMN02745118_00141
symbol: fmt
gene_biotype: protein_coding
description:
  methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.


ensembl_gene_id: SAMN02745118_00142
symbol: def
gene_biotype: protein_coding
description:
  Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.


ensembl_gene_id: SAMN02745118_00143
symbol: priA
gene_biotype: protein_coding
description:
  Replication restart DNA helicase PriA; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.


ensembl_gene_id: SAMN02745118_00144
symbol: metK
gene_biotype: protein_coding
description:
  Methionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.


ensembl_gene_id: SAMN02745118_00147
symbol: SJZ30970.1
gene_biotype: protein_coding
description:
  Putative ABC transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: SAMN02745118_00149
symbol: luxS
gene_biotype: protein_coding
description:
  S-ribosylhomocysteine lyase /quorum-sensing autoinducer 2 (AI-2) synthesis protein LuxS; Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5-dihydroxy-2,3-pentadione (DPD). Belongs to the LuxS family.


ensembl_gene_id: SAMN02745118_00150
symbol: SJZ30980.1
gene_biotype: protein_coding
description:
  Phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.


ensembl_gene_id: SAMN02745118_00151
symbol: rpoZ
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.


ensembl_gene_id: SAMN02745118_00156
symbol: hisF
gene_biotype: protein_coding
description:
  Cyclase; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.


ensembl_gene_id: SAMN02745118_00157
symbol: hisA
gene_biotype: protein_coding
description:
  1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase.


ensembl_gene_id: SAMN02745118_00158
symbol: hisH
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase subunit hisH; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.


ensembl_gene_id: SAMN02745118_00160
symbol: hisD
gene_biotype: protein_coding
description:
  Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.


ensembl_gene_id: SAMN02745118_00161
symbol: hisG
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Short subfamily.


ensembl_gene_id: SAMN02745118_00162
symbol: hisS
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase regulatory subunit; Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine.


ensembl_gene_id: SAMN02745118_00164
symbol: ndk
gene_biotype: protein_coding
description:
  Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.


ensembl_gene_id: SAMN02745118_00170
symbol: prsA
gene_biotype: protein_coding
description:
  Foldase protein PrsA; Plays a major role in protein secretion by helping the post- translocational extracellular folding of several secreted proteins.


ensembl_gene_id: SAMN02745118_00183
symbol: recA
gene_biotype: protein_coding
description:
  Recombination protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.


ensembl_gene_id: SAMN02745118_00194
symbol: SJZ31277.1
gene_biotype: protein_coding
description:
  CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: SAMN02745118_00195
symbol: rimO
gene_biotype: protein_coding
description:
  SSU ribosomal protein S12P methylthiotransferase; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.


ensembl_gene_id: SAMN02745118_00210
symbol: SJZ31367.1
gene_biotype: protein_coding
description:
  Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.


ensembl_gene_id: SAMN02745118_00220
symbol: SJZ31421.1
gene_biotype: protein_coding
description:
  Sodium/proline symporter; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.


ensembl_gene_id: SAMN02745118_00224
symbol: argD
gene_biotype: protein_coding
description:
  Acetylornithine aminotransferase apoenzyme; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.


ensembl_gene_id: SAMN02745118_00225
symbol: argB
gene_biotype: protein_coding
description:
  N-acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.


ensembl_gene_id: SAMN02745118_00226
symbol: argJ
gene_biotype: protein_coding
description:
  Glutamate N-acetyltransferase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family.


ensembl_gene_id: SAMN02745118_00227
symbol: argC
gene_biotype: protein_coding
description:
  N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.


ensembl_gene_id: SAMN02745118_00232
symbol: surE
gene_biotype: protein_coding
description:
  5'-nucleotidase /3'-nucleotidase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.


ensembl_gene_id: SAMN02745118_00237
symbol: uppP
gene_biotype: protein_coding
description:
  Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.


ensembl_gene_id: SAMN02745118_00238
symbol: recU
gene_biotype: protein_coding
description:
  Recombination protein U; Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation; Belongs to the RecU family.


ensembl_gene_id: SAMN02745118_00239
symbol: SJZ31529.1
gene_biotype: protein_coding
description:
  RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: SAMN02745118_00242
symbol: SJZ31547.1
gene_biotype: protein_coding
description:
  Nucleoside ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: SAMN02745118_00253
symbol: rnj
gene_biotype: protein_coding
description:
  Ribonuclease J; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay.


ensembl_gene_id: SAMN02745118_00255
symbol: dapA
gene_biotype: protein_coding
description:
  4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).


ensembl_gene_id: SAMN02745118_00257
symbol: asd
gene_biotype: protein_coding
description:
  Aspartate semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.


ensembl_gene_id: SAMN02745118_00260
symbol: dapB
gene_biotype: protein_coding
description:
  Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.


ensembl_gene_id: SAMN02745118_00263
symbol: dut
gene_biotype: protein_coding
description:
  Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family.


ensembl_gene_id: SAMN02745118_00270
symbol: nfo
gene_biotype: protein_coding
description:
  Endonuclease IV; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin.


ensembl_gene_id: SAMN02745118_00271
symbol: pnp
gene_biotype: protein_coding
description:
  Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.


ensembl_gene_id: SAMN02745118_00272
symbol: rpsO
gene_biotype: protein_coding
description:
  SSU ribosomal protein S15P; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.


ensembl_gene_id: SAMN02745118_00275
symbol: rbfA
gene_biotype: protein_coding
description:
  Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.


ensembl_gene_id: SAMN02745118_00276
symbol: infB
gene_biotype: protein_coding
description:
  Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.


ensembl_gene_id: SAMN02745118_00278
symbol: rimP
gene_biotype: protein_coding
description:
  Ribosome maturation factor RimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.


ensembl_gene_id: SAMN02745118_00283
symbol: trpA
gene_biotype: protein_coding
description:
  Tryptophan synthase, alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.


ensembl_gene_id: SAMN02745118_00284
symbol: trpB
gene_biotype: protein_coding
description:
  Tryptophan synthase, beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.


ensembl_gene_id: SAMN02745118_00287
symbol: trpD
gene_biotype: protein_coding
description:
  Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).


ensembl_gene_id: SAMN02745118_00288
symbol: trpE
gene_biotype: protein_coding
description:
  Anthranilate synthase, component I; Part of a heterotetrameric complex that catalyzes the two- step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine-binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concent [...]


ensembl_gene_id: SAMN02745118_00318
symbol: SJZ32382.1
gene_biotype: protein_coding
description:
  Malate/lactate/ureidoglycolate dehydrogenase, LDH2 family; Belongs to the LDH2/MDH2 oxidoreductase family.


ensembl_gene_id: SAMN02745118_00324
symbol: SJZ32420.1
gene_biotype: protein_coding
description:
  tRNA (cytidine/uridine-2'-O-)-methyltransferase; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.


ensembl_gene_id: SAMN02745118_00334
symbol: bioB
gene_biotype: protein_coding
description:
  Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.


ensembl_gene_id: SAMN02745118_00350
symbol: SJZ32731.1
gene_biotype: protein_coding
description:
  Ribose ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: SAMN02745118_00351
symbol: rbsA
gene_biotype: protein_coding
description:
  Ribose ABC transporter ATP-binding protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.


ensembl_gene_id: SAMN02745118_00353
symbol: rbsK
gene_biotype: protein_coding
description:
  Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.


ensembl_gene_id: SAMN02745118_00370
symbol: SJZ33020.1
gene_biotype: protein_coding
description:
  23S rRNA m(5)U-1939 methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.


ensembl_gene_id: SAMN02745118_00376
symbol: gatB
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily.


ensembl_gene_id: SAMN02745118_00377
symbol: gatA
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).


ensembl_gene_id: SAMN02745118_00378
symbol: gatC
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.


ensembl_gene_id: SAMN02745118_00395
symbol: SJZ33387.1
gene_biotype: protein_coding
description:
  Molybdenum cofactor synthesis domain-containing protein; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.


ensembl_gene_id: SAMN02745118_00400
symbol: SJZ33525.1
gene_biotype: protein_coding
description:
  glutaconyl-CoA decarboxylase beta subunit; Tunnel subunit of the primary sodium pump glutaconyl-CoA decarboxylase (GCD).


ensembl_gene_id: SAMN02745118_00410
symbol: ligA
gene_biotype: protein_coding
description:
  DNA ligase (NAD+); DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA.


ensembl_gene_id: SAMN02745118_00413
symbol: tatA
gene_biotype: protein_coding
description:
  Sec-independent protein translocase TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.


ensembl_gene_id: SAMN02745118_00416
symbol: tatA-2
gene_biotype: protein_coding
description:
  Sec-independent protein translocase protein TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.


ensembl_gene_id: SAMN02745118_00422
symbol: SJZ33837.1
gene_biotype: protein_coding
description:
  DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: SAMN02745118_00434
symbol: cysC
gene_biotype: protein_coding
description:
  Bifunctional enzyme CysN/CysC; Catalyzes the synthesis of activated sulfate. Belongs to the APS kinase family.


ensembl_gene_id: SAMN02745118_00439
symbol: metN
gene_biotype: protein_coding
description:
  D-methionine transport system ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.


ensembl_gene_id: SAMN02745118_00444
symbol: SJZ34097.1
gene_biotype: protein_coding
description:
  Molybdopterin adenylyltransferase; May be involved in the biosynthesis of molybdopterin. Belongs to the MoaB/Mog family.


ensembl_gene_id: SAMN02745118_00446
symbol: moaC
gene_biotype: protein_coding
description:
  Cyclic pyranopterin phosphate synthase; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family.


ensembl_gene_id: SAMN02745118_00447
symbol: moaA
gene_biotype: protein_coding
description:
  Cyclic pyranopterin monophosphate synthase subunit MoaA; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.


ensembl_gene_id: SAMN02745118_00448
symbol: SJZ34143.1
gene_biotype: protein_coding
description:
  Putative molybdopterin biosynthesis protein; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.


ensembl_gene_id: SAMN02745118_00449
symbol: SJZ34164.1
gene_biotype: protein_coding
description:
  Molybdopterin molybdochelatase; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.


ensembl_gene_id: SAMN02745118_00455
symbol: groL
gene_biotype: protein_coding
description:
  Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.


ensembl_gene_id: SAMN02745118_00456
symbol: groS
gene_biotype: protein_coding
description:
  Chaperonin GroES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.


ensembl_gene_id: SAMN02745118_00460
symbol: tsaD
gene_biotype: protein_coding
description:
  O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.


ensembl_gene_id: SAMN02745118_00461
symbol: SJZ34315.1
gene_biotype: protein_coding
description:
  Ribosomal-protein-alanine N-acetyltransferase; Acetylates the N-terminal alanine of ribosomal protein S18.


ensembl_gene_id: SAMN02745118_00473
symbol: nnrD
gene_biotype: protein_coding
description:
  NAD(P)H-hydrate epimerase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration.  Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of bot [...]


ensembl_gene_id: SAMN02745118_00474
symbol: acpS
gene_biotype: protein_coding
description:
  Holo-[acyl-carrier-protein] synthase; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family.


ensembl_gene_id: SAMN02745118_00475
symbol: glmS
gene_biotype: protein_coding
description:
  Glucosamine--fructose-6-phosphate aminotransferase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.


ensembl_gene_id: SAMN02745118_00477
symbol: glmM
gene_biotype: protein_coding
description:
  Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.


ensembl_gene_id: SAMN02745118_00481
symbol: leuD
gene_biotype: protein_coding
description:
  3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 2 subfamily.


ensembl_gene_id: SAMN02745118_00482
symbol: leuC
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydratase, large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.


ensembl_gene_id: SAMN02745118_00483
symbol: leuA
gene_biotype: protein_coding
description:
  2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily.


ensembl_gene_id: SAMN02745118_00484
symbol: ilvC
gene_biotype: protein_coding
description:
  Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate.


ensembl_gene_id: SAMN02745118_00510
symbol: rsmH
gene_biotype: protein_coding
description:
  16S rRNA (cytosine1402-N4)-methyltransferase; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.


ensembl_gene_id: SAMN02745118_00513
symbol: murE
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily.


ensembl_gene_id: SAMN02745118_00514
symbol: murF
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.


ensembl_gene_id: SAMN02745118_00515
symbol: mraY
gene_biotype: protein_coding
description:
  Phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.


ensembl_gene_id: SAMN02745118_00516
symbol: murD
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.


ensembl_gene_id: SAMN02745118_00518
symbol: murG
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine-N- acetylmuramylpentapeptide N-acetylglucosamine transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.


ensembl_gene_id: SAMN02745118_00521
symbol: murA
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.


ensembl_gene_id: SAMN02745118_00522
symbol: ddl
gene_biotype: protein_coding
description:
  D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.


ensembl_gene_id: SAMN02745118_00524
symbol: ftsA
gene_biotype: protein_coding
description:
  Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.


ensembl_gene_id: SAMN02745118_00525
symbol: ftsZ
gene_biotype: protein_coding
description:
  Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.


ensembl_gene_id: SAMN02745118_00526
symbol: SJZ35709.1
gene_biotype: protein_coding
description:
  Stage II sporulation protein GA (sporulation sigma-E factor processing peptidase); Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family.


ensembl_gene_id: SAMN02745118_00527
symbol: SJZ35723.1
gene_biotype: protein_coding
description:
  RNA polymerase, sigma 29 subunit, SigE; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: SAMN02745118_00532
symbol: cobT
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB).


ensembl_gene_id: SAMN02745118_00545
symbol: SJZ36093.1
gene_biotype: protein_coding
description:
  Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: SAMN02745118_00557
symbol: leuC-2
gene_biotype: protein_coding
description:
  3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.


ensembl_gene_id: SAMN02745118_00558
symbol: leuD-2
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydratase, small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 2 subfamily.


ensembl_gene_id: SAMN02745118_00565
symbol: SJZ36483.1
gene_biotype: protein_coding
description:
  Oxaloacetate decarboxylase, beta subunit; Tunnel subunit of the primary sodium pump glutaconyl-CoA decarboxylase (GCD).


ensembl_gene_id: SAMN02745118_00568
symbol: cbiM
gene_biotype: protein_coding
description:
  Cobalt/nickel transport system permease protein; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import.


ensembl_gene_id: SAMN02745118_00569
symbol: cbiN
gene_biotype: protein_coding
description:
  Cobalt/nickel transport protein; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import; Belongs to the CbiN family.


ensembl_gene_id: SAMN02745118_00571
symbol: SJZ36666.1
gene_biotype: protein_coding
description:
  Cobalt/nickel transport system ATP-binding protein; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.


ensembl_gene_id: SAMN02745118_00583
symbol: glgC
gene_biotype: protein_coding
description:
  Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.


ensembl_gene_id: SAMN02745118_00590
symbol: cbiD
gene_biotype: protein_coding
description:
  Cobalt-precorrin 5B C1-methyltransferase; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A.


ensembl_gene_id: SAMN02745118_00599
symbol: cobQ
gene_biotype: protein_coding
description:
  Adenosylcobyric acid synthase (glutamine-hydrolysing); Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.


ensembl_gene_id: SAMN02745118_00601
symbol: cobD
gene_biotype: protein_coding
description:
  Adenosylcobinamide-phosphate synthase; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.


ensembl_gene_id: SAMN02745118_00602
symbol: cbiA
gene_biotype: protein_coding
description:
  Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.


ensembl_gene_id: SAMN02745118_00604
symbol: cobS
gene_biotype: protein_coding
description:
  Cobalamin-5'-phosphate synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.


ensembl_gene_id: SAMN02745118_00620
symbol: SJZ37619.1
gene_biotype: protein_coding
description:
  ABC-type Fe3+/spermidine/putrescine transport systems, ATPase components; Belongs to the ABC transporter superfamily.


ensembl_gene_id: SAMN02745118_00625
symbol: SJZ37714.1
gene_biotype: protein_coding
description:
  RNA polymerase, sigma subunit, RpsG/SigG; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: SAMN02745118_00636
symbol: SJZ37904.1
gene_biotype: protein_coding
description:
  Glutamate--cysteine ligase; Catalyzes the synthesis of gamma-glutamylcysteine (gamma-GC). Belongs to the glutamate--cysteine ligase type 2 family. EgtA subfamily.


ensembl_gene_id: SAMN02745118_00639
symbol: queE
gene_biotype: protein_coding
description:
  7-carboxy-7-deazaguanine synthase; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds.


ensembl_gene_id: SAMN02745118_00640
symbol: queC
gene_biotype: protein_coding
description:
  preQ(0) biosynthesis protein QueC; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)).


ensembl_gene_id: SAMN02745118_00686
symbol: SJZ38756.1
gene_biotype: protein_coding
description:
  Carbon-monoxide dehydrogenase iron sulfur subunit; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.


ensembl_gene_id: SAMN02745118_00692
symbol: thiI
gene_biotype: protein_coding
description:
  Thiamine biosynthesis protein ThiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS.


ensembl_gene_id: SAMN02745118_00712
symbol: coaE
gene_biotype: protein_coding
description:
  dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.


ensembl_gene_id: SAMN02745118_00714
symbol: mutM
gene_biotype: protein_coding
description:
  DNA-(apurinic or apyrimidinic site) lyase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates.


ensembl_gene_id: SAMN02745118_00715
symbol: SJZ40175.1
gene_biotype: protein_coding
description:
  Cation diffusion facilitator family transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.


ensembl_gene_id: SAMN02745118_00718
symbol: polA
gene_biotype: protein_coding
description:
  DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.


ensembl_gene_id: SAMN02745118_00722
symbol: SJZ40317.1
gene_biotype: protein_coding
description:
  4Fe-4S dicluster domain-containing protein; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.


ensembl_gene_id: SAMN02745118_00724
symbol: topA
gene_biotype: protein_coding
description:
  DNA topoisomerase-1; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]


ensembl_gene_id: SAMN02745118_00725
symbol: SJZ40360.1
gene_biotype: protein_coding
description:
  Diaminopimelate dehydrogenase; Catalyzes the reversible NADPH-dependent reductive amination of L-2-amino-6-oxopimelate, the acyclic form of L- tetrahydrodipicolinate, to generate the meso compound, D,L-2,6- diaminopimelate.


ensembl_gene_id: SAMN02745118_00730
symbol: zwf
gene_biotype: protein_coding
description:
  Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.


ensembl_gene_id: SAMN02745118_00744
symbol: cheD
gene_biotype: protein_coding
description:
  Chemotaxis protein CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.


ensembl_gene_id: SAMN02745118_00761
symbol: smpB
gene_biotype: protein_coding
description:
  SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...]


ensembl_gene_id: SAMN02745118_00762
symbol: rnr
gene_biotype: protein_coding
description:
  RNAse R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.


ensembl_gene_id: SAMN02745118_00766
symbol: hppA
gene_biotype: protein_coding
description:
  K(+)-stimulated pyrophosphate-energized sodium pump; Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na(+) movement across the membrane. Belongs to the H(+)-translocating pyrophosphatase (TC 3.A.10) family. K(+)-stimulated subfamily.


ensembl_gene_id: SAMN02745118_00767
symbol: SJZ41429.1
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.


ensembl_gene_id: SAMN02745118_00768
symbol: eno
gene_biotype: protein_coding
description:
  Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.


ensembl_gene_id: SAMN02745118_00769
symbol: gpmI
gene_biotype: protein_coding
description:
  Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.


ensembl_gene_id: SAMN02745118_00770
symbol: tpiA
gene_biotype: protein_coding
description:
  Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.


ensembl_gene_id: SAMN02745118_00772
symbol: SJZ41583.1
gene_biotype: protein_coding
description:
  Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: SAMN02745118_00776
symbol: SJZ41655.1
gene_biotype: protein_coding
description:
  Conserved hypothetical protein, cofD-related; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family.


ensembl_gene_id: SAMN02745118_00789
symbol: hprK
gene_biotype: protein_coding
description:
  Hpr(Ser) kinase/phosphatase; Catalyzes the ATP- as well as the pyrophosphate-dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK/P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P-Ser-HPr). The two antagonistic activities of HprK/P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable car [...]


ensembl_gene_id: SAMN02745118_00798
symbol: bshC
gene_biotype: protein_coding
description:
  Bacillithiol biosynthesis cysteine-adding enzyme BshC; Involved in bacillithiol (BSH) biosynthesis. May catalyze the last step of the pathway, the addition of cysteine to glucosamine malate (GlcN-Mal) to generate BSH.


ensembl_gene_id: SAMN02745118_00799
symbol: add
gene_biotype: protein_coding
description:
  Adenosine deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenosine and AMP deaminases family. Adenosine deaminase subfamily.


ensembl_gene_id: SAMN02745118_00807
symbol: uvrC
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.


ensembl_gene_id: SAMN02745118_00808
symbol: uvrA
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.


ensembl_gene_id: SAMN02745118_00809
symbol: uvrB
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate  [...]


ensembl_gene_id: SAMN02745118_00816
symbol: SJZ42758.1
gene_biotype: protein_coding
description:
  N-acetylmannosaminyltransferase; Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid.


ensembl_gene_id: SAMN02745118_00820
symbol: prfB
gene_biotype: protein_coding
description:
  Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.


ensembl_gene_id: SAMN02745118_00821
symbol: secA
gene_biotype: protein_coding
description:
  Protein translocase subunit secA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family.


ensembl_gene_id: SAMN02745118_00822
symbol: hpf
gene_biotype: protein_coding
description:
  Putative sigma-54 modulation protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.


ensembl_gene_id: SAMN02745118_00827
symbol: SJZ43232.1
gene_biotype: protein_coding
description:
  Amino acid ABC transporter substrate-binding protein, PAAT family; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: SAMN02745118_00855
symbol: SJZ44075.1
gene_biotype: protein_coding
description:
  Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.


ensembl_gene_id: SAMN02745118_00856
symbol: SJZ44115.1
gene_biotype: protein_coding
description:
  Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.


ensembl_gene_id: SAMN02745118_00857
symbol: csrA
gene_biotype: protein_coding
description:
  Carbon storage regulator, CsrA; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW.


ensembl_gene_id: SAMN02745118_00858
symbol: fliW
gene_biotype: protein_coding
description:
  Flagellar assembly factor FliW; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum.


ensembl_gene_id: SAMN02745118_00890
symbol: SJZ45069.1
gene_biotype: protein_coding
description:
  rfaE bifunctional protein, domain II; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose.


ensembl_gene_id: SAMN02745118_00894
symbol: SJZ45166.1
gene_biotype: protein_coding
description:
  phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).


ensembl_gene_id: SAMN02745118_00926
symbol: SJZ47018.1
gene_biotype: protein_coding
description:
  RNase H-fold protein, predicted Holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family.


ensembl_gene_id: SAMN02745118_00936
symbol: kdsB
gene_biotype: protein_coding
description:
  3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase); Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria.


ensembl_gene_id: SAMN02745118_00937
symbol: lpxK
gene_biotype: protein_coding
description:
  lipid-A-disaccharide kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).


ensembl_gene_id: SAMN02745118_00940
symbol: lpxB
gene_biotype: protein_coding
description:
  lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: SAMN02745118_00942
symbol: lpxA
gene_biotype: protein_coding
description:
  acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: SAMN02745118_00943
symbol: fabZ
gene_biotype: protein_coding
description:
  3-hydroxyacyl-[acyl-carrier-protein] dehydratase; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.


ensembl_gene_id: SAMN02745118_00944
symbol: lpxC
gene_biotype: protein_coding
description:
  UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the LpxC family.


ensembl_gene_id: SAMN02745118_00948
symbol: lpxD
gene_biotype: protein_coding
description:
  UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily.


ensembl_gene_id: SAMN02745118_00956
symbol: flgI
gene_biotype: protein_coding
description:
  Flagellar P-ring protein precursor FlgI; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.


ensembl_gene_id: SAMN02745118_00957
symbol: flgH
gene_biotype: protein_coding
description:
  Flagellar L-ring protein precursor FlgH; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.


ensembl_gene_id: SAMN02745118_00966
symbol: atpC
gene_biotype: protein_coding
description:
  ATP synthase F1 subcomplex epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.


ensembl_gene_id: SAMN02745118_00967
symbol: atpD
gene_biotype: protein_coding
description:
  ATP synthase F1 subcomplex beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.


ensembl_gene_id: SAMN02745118_00968
symbol: atpG
gene_biotype: protein_coding
description:
  ATP synthase F1 subcomplex gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.


ensembl_gene_id: SAMN02745118_00969
symbol: atpA
gene_biotype: protein_coding
description:
  ATP synthase F1 subcomplex alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.


ensembl_gene_id: SAMN02745118_00970
symbol: atpH
gene_biotype: protein_coding
description:
  F-type H+-transporting ATPase subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: SAMN02745118_00971
symbol: atpF
gene_biotype: protein_coding
description:
  F-type H+-transporting ATPase subunit b; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.


ensembl_gene_id: SAMN02745118_00972
symbol: atpE
gene_biotype: protein_coding
description:
  ATP synthase F0 subcomplex C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: SAMN02745118_00973
symbol: atpB
gene_biotype: protein_coding
description:
  ATP synthase F0 subcomplex A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.


ensembl_gene_id: SAMN02745118_00978
symbol: upp
gene_biotype: protein_coding
description:
  Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.


ensembl_gene_id: SAMN02745118_00979
symbol: glyA
gene_biotype: protein_coding
description:
  Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.


ensembl_gene_id: SAMN02745118_00981
symbol: SJZ48300.1
gene_biotype: protein_coding
description:
  Protein-tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.


ensembl_gene_id: SAMN02745118_00982
symbol: SJZ48319.1
gene_biotype: protein_coding
description:
  Translation factor SUA5; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.


ensembl_gene_id: SAMN02745118_00985
symbol: prmC
gene_biotype: protein_coding
description:
  Release factor glutamine methyltransferase; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.


ensembl_gene_id: SAMN02745118_00986
symbol: prfA
gene_biotype: protein_coding
description:
  Bacterial peptide chain release factor 1 (bRF-1); Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.


ensembl_gene_id: SAMN02745118_00989
symbol: rho
gene_biotype: protein_coding
description:
  Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.


ensembl_gene_id: SAMN02745118_00995
symbol: pyrG
gene_biotype: protein_coding
description:
  CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.


ensembl_gene_id: SAMN02745118_01008
symbol: nadE
gene_biotype: protein_coding
description:
  NAD+ synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source; Belongs to the NAD synthetase family.


ensembl_gene_id: SAMN02745118_01016
symbol: SJZ49108.1
gene_biotype: protein_coding
description:
  Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.


ensembl_gene_id: SAMN02745118_01028
symbol: rlmH
gene_biotype: protein_coding
description:
  23S rRNA (pseudouridine1915-N3)-methyltransferase; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.


ensembl_gene_id: SAMN02745118_01032
symbol: hflX
gene_biotype: protein_coding
description:
  GTP-binding protein HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis.


ensembl_gene_id: SAMN02745118_01051
symbol: hslO
gene_biotype: protein_coding
description:
  Molecular chaperone Hsp33; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress.


ensembl_gene_id: SAMN02745118_01054
symbol: pdxS
gene_biotype: protein_coding
description:
  Pyridoxal phosphate synthase yaaD subunit; Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5- phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively. Belongs to the PdxS/SNZ family.


ensembl_gene_id: SAMN02745118_01055
symbol: pdxT
gene_biotype: protein_coding
description:
  Pyridoxal phosphate synthase yaaE subunit; Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS.


ensembl_gene_id: SAMN02745118_01063
symbol: deoC
gene_biotype: protein_coding
description:
  Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.


ensembl_gene_id: SAMN02745118_01066
symbol: SJZ51803.1
gene_biotype: protein_coding
description:
  Monovalent cation:H+ antiporter-2, CPA2 family; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.


ensembl_gene_id: SAMN02745118_01078
symbol: thiG
gene_biotype: protein_coding
description:
  Thiazole-phosphate synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.


ensembl_gene_id: SAMN02745118_01084
symbol: nadA
gene_biotype: protein_coding
description:
  Quinolinate synthetase; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.


ensembl_gene_id: SAMN02745118_01131
symbol: SJZ53889.1
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; Belongs to the MurCDEF family. MurE subfamily.


ensembl_gene_id: SAMN02745118_01135
symbol: thrB
gene_biotype: protein_coding
description:
  Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily.


ensembl_gene_id: SAMN02745118_01139
symbol: ilvE
gene_biotype: protein_coding
description:
  Branched chain amino acid aminotransferase apoenzyme; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: SAMN02745118_01140
symbol: SJZ54118.1
gene_biotype: protein_coding
description:
  DNA-binding protein HU-beta; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.


ensembl_gene_id: SAMN02745118_01141
symbol: SJZ54128.1
gene_biotype: protein_coding
description:
  Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.


ensembl_gene_id: SAMN02745118_01143
symbol: gpsA
gene_biotype: protein_coding
description:
  Glycerol 3-phosphate dehydrogenase (NAD(P)+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: SAMN02745118_01144
symbol: plsY
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate acyltransferase PlsY; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.


ensembl_gene_id: SAMN02745118_01145
symbol: der
gene_biotype: protein_coding
description:
  GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.


ensembl_gene_id: SAMN02745118_01153
symbol: ispH
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.


ensembl_gene_id: SAMN02745118_01157
symbol: SJZ54555.1
gene_biotype: protein_coding
description:
  1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.


ensembl_gene_id: SAMN02745118_01159
symbol: aroA
gene_biotype: protein_coding
description:
  3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.


ensembl_gene_id: SAMN02745118_01162
symbol: hisC
gene_biotype: protein_coding
description:
  Histidinol phosphate aminotransferase apoenzyme; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.


ensembl_gene_id: SAMN02745118_01163
symbol: SJZ54712.1
gene_biotype: protein_coding
description:
  Chorismate mutase; Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis.


ensembl_gene_id: SAMN02745118_01167
symbol: rnc
gene_biotype: protein_coding
description:
  RNAse III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.


ensembl_gene_id: SAMN02745118_01168
symbol: SJZ54856.1
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.


ensembl_gene_id: SAMN02745118_01171
symbol: SJZ54977.1
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: SAMN02745118_01174
symbol: fabH
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] synthase-3; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.


ensembl_gene_id: SAMN02745118_01175
symbol: plsX
gene_biotype: protein_coding
description:
  Phosphate:acyl-[acyl carrier protein] acyltransferase; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.


ensembl_gene_id: SAMN02745118_01179
symbol: ackA
gene_biotype: protein_coding
description:
  Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.


ensembl_gene_id: SAMN02745118_01207
symbol: SJZ56828.1
gene_biotype: protein_coding
description:
  Anaerobic sulfite reductase subunit C; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.


ensembl_gene_id: SAMN02745118_01215
symbol: metXA
gene_biotype: protein_coding
description:
  Homoserine O-acetyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine.


ensembl_gene_id: SAMN02745118_01222
symbol: SJZ57146.1
gene_biotype: protein_coding
description:
  Anaerobic dimethyl sulfoxide reductase subunit A; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: SAMN02745118_01224
symbol: tatC
gene_biotype: protein_coding
description:
  Sec-independent protein translocase protein TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes.


ensembl_gene_id: SAMN02745118_01240
symbol: SJZ57917.1
gene_biotype: protein_coding
description:
  Nitrite/Sulfite reductase ferredoxin-like half domain-containing protein; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.


ensembl_gene_id: SAMN02745118_01246
symbol: SJZ58100.1
gene_biotype: protein_coding
description:
  Ribonucleoside-diphosphate reductase class II; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen.


ensembl_gene_id: SAMN02745118_01249
symbol: nuoK
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit K; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family.


ensembl_gene_id: SAMN02745118_01252
symbol: nuoN
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family.


ensembl_gene_id: SAMN02745118_01253
symbol: nuoA
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit A; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family.


ensembl_gene_id: SAMN02745118_01254
symbol: nuoB
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit B; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: SAMN02745118_01255
symbol: nuoC
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit C; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family.


ensembl_gene_id: SAMN02745118_01256
symbol: nuoD
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family.


ensembl_gene_id: SAMN02745118_01257
symbol: nuoH
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit H; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone.


ensembl_gene_id: SAMN02745118_01259
symbol: SJZ58477.1
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit J; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: SAMN02745118_01279
symbol: mprF
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms.


ensembl_gene_id: SAMN02745118_01283
symbol: SJZ59273.1
gene_biotype: protein_coding
description:
  Concentrative nucleoside transporter, CNT family; Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family.


ensembl_gene_id: SAMN02745118_01293
symbol: SJZ59607.1
gene_biotype: protein_coding
description:
  Heavy metal efflux pump, CzcA family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: SAMN02745118_01309
symbol: lnt
gene_biotype: protein_coding
description:
  Apolipoprotein N-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily.


ensembl_gene_id: SAMN02745118_01311
symbol: lexA
gene_biotype: protein_coding
description:
  Repressor LexA; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair.


ensembl_gene_id: SAMN02745118_01317
symbol: dinB
gene_biotype: protein_coding
description:
  DNA polymerase-4; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.


ensembl_gene_id: SAMN02745118_01319
symbol: hfq
gene_biotype: protein_coding
description:
  RNA-binding protein Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family.


ensembl_gene_id: SAMN02745118_01325
symbol: miaA
gene_biotype: protein_coding
description:
  tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.


ensembl_gene_id: SAMN02745118_01326
symbol: mutL
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.


ensembl_gene_id: SAMN02745118_01327
symbol: mutS
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.


ensembl_gene_id: SAMN02745118_01328
symbol: SJZ60385.1
gene_biotype: protein_coding
description:
  Cell fate regulator YlbF, YheA/YmcA/DUF963 family (controls sporulation, competence, biofilm development); Belongs to the UPF0342 family.


ensembl_gene_id: SAMN02745118_01329
symbol: miaB
gene_biotype: protein_coding
description:
  tRNA-i(6)A37 thiotransferase enzyme MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.


ensembl_gene_id: SAMN02745118_01341
symbol: deoB
gene_biotype: protein_coding
description:
  Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family.


ensembl_gene_id: SAMN02745118_01342
symbol: SJZ62019.1
gene_biotype: protein_coding
description:
  Purine-nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.


ensembl_gene_id: SAMN02745118_01346
symbol: SJZ62107.1
gene_biotype: protein_coding
description:
  D-Ala-D-Ala carboxypeptidase DacF. Serine peptidase. MEROPS family S11; Belongs to the peptidase S11 family.


ensembl_gene_id: SAMN02745118_01348
symbol: spoIIAB
gene_biotype: protein_coding
description:
  Stage II sporulation protein AB (anti-sigma F factor); Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition.


ensembl_gene_id: SAMN02745118_01349
symbol: SJZ62175.1
gene_biotype: protein_coding
description:
  RNA polymerase, sigma subunit, RpoX/SigF; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: SAMN02745118_01366
symbol: lysA
gene_biotype: protein_coding
description:
  Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.


ensembl_gene_id: SAMN02745118_01372
symbol: trpS
gene_biotype: protein_coding
description:
  tryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: SAMN02745118_01373
symbol: scpA
gene_biotype: protein_coding
description:
  Condensin subunit ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: SAMN02745118_01374
symbol: scpB
gene_biotype: protein_coding
description:
  Condensin subunit ScpB; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: SAMN02745118_01377
symbol: SJZ63068.1
gene_biotype: protein_coding
description:
  D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family.


ensembl_gene_id: SAMN02745118_01379
symbol: SJZ63167.1
gene_biotype: protein_coding
description:
  Ribosomal large subunit pseudouridine synthase B; Belongs to the pseudouridine synthase RsuA family.


ensembl_gene_id: SAMN02745118_01382
symbol: smc
gene_biotype: protein_coding
description:
  Condensin subunit Smc; Required for chromosome condensation and partitioning. Belongs to the SMC family.


ensembl_gene_id: SAMN02745118_01384
symbol: ftsY
gene_biotype: protein_coding
description:
  Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC).


ensembl_gene_id: SAMN02745118_01385
symbol: SJZ63334.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a regulatory protein.


ensembl_gene_id: SAMN02745118_01386
symbol: ffh
gene_biotype: protein_coding
description:
  Signal recognition particle subunit FFH/SRP54 (srp54); Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily.


ensembl_gene_id: SAMN02745118_01389
symbol: rimM
gene_biotype: protein_coding
description:
  16S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.


ensembl_gene_id: SAMN02745118_01390
symbol: trmD
gene_biotype: protein_coding
description:
  tRNA (guanine37-N1)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.


ensembl_gene_id: SAMN02745118_01392
symbol: rplS
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.


ensembl_gene_id: SAMN02745118_01394
symbol: SJZ63641.1
gene_biotype: protein_coding
description:
  Ribosome biogenesis GTPase A; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.


ensembl_gene_id: SAMN02745118_01402
symbol: topA-2
gene_biotype: protein_coding
description:
  DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]


ensembl_gene_id: SAMN02745118_01403
symbol: hslV
gene_biotype: protein_coding
description:
  ATP dependent peptidase CodWX, CodW component. Threonine peptidase. MEROPS family T01B; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery.


ensembl_gene_id: SAMN02745118_01404
symbol: hslU
gene_biotype: protein_coding
description:
  ATP-dependent HslUV protease ATP-binding subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis.


ensembl_gene_id: SAMN02745118_01405
symbol: codY
gene_biotype: protein_coding
description:
  Transcriptional pleiotropic repressor; DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor; Belongs to the CodY family.


ensembl_gene_id: SAMN02745118_01407
symbol: SJZ64000.1
gene_biotype: protein_coding
description:
  Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.


ensembl_gene_id: SAMN02745118_01410
symbol: SJZ64049.1
gene_biotype: protein_coding
description:
  Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.


ensembl_gene_id: SAMN02745118_01423
symbol: SJZ64344.1
gene_biotype: protein_coding
description:
  Flagellar FliL protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.


ensembl_gene_id: SAMN02745118_01427
symbol: fliP
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.


ensembl_gene_id: SAMN02745118_01428
symbol: fliQ
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.


ensembl_gene_id: SAMN02745118_01429
symbol: SJZ64483.1
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family.


ensembl_gene_id: SAMN02745118_01430
symbol: flhB
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family.


ensembl_gene_id: SAMN02745118_01447
symbol: tsf
gene_biotype: protein_coding
description:
  Elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.


ensembl_gene_id: SAMN02745118_01449
symbol: frr
gene_biotype: protein_coding
description:
  Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.


ensembl_gene_id: SAMN02745118_01451
symbol: SJZ64915.1
gene_biotype: protein_coding
description:
  Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.


ensembl_gene_id: SAMN02745118_01454
symbol: dxr
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family.


ensembl_gene_id: SAMN02745118_01458
symbol: ispG
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family.


ensembl_gene_id: SAMN02745118_01459
symbol: proS
gene_biotype: protein_coding
description:
  prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves dea [...]


ensembl_gene_id: SAMN02745118_01462
symbol: polC
gene_biotype: protein_coding
description:
  DNA polymerase-3 subunit alpha; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: SAMN02745118_01474
symbol: hemC
gene_biotype: protein_coding
description:
  Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.


ensembl_gene_id: SAMN02745118_01477
symbol: hemA
gene_biotype: protein_coding
description:
  glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).


ensembl_gene_id: SAMN02745118_01480
symbol: menG
gene_biotype: protein_coding
description:
  Demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2).


ensembl_gene_id: SAMN02745118_01490
symbol: rnfB
gene_biotype: protein_coding
description:
  Electron transport complex, RnfABCDGE type, B subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.


ensembl_gene_id: SAMN02745118_01491
symbol: rnfA
gene_biotype: protein_coding
description:
  Electron transport complex protein RnfA; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.


ensembl_gene_id: SAMN02745118_01492
symbol: rnfE
gene_biotype: protein_coding
description:
  Electron transport complex protein RnfE; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.


ensembl_gene_id: SAMN02745118_01493
symbol: rnfG
gene_biotype: protein_coding
description:
  Electron transport complex protein RnfG; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the RnfG family.


ensembl_gene_id: SAMN02745118_01494
symbol: rnfD
gene_biotype: protein_coding
description:
  Electron transport complex protein RnfD; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family.


ensembl_gene_id: SAMN02745118_01495
symbol: rnfC
gene_biotype: protein_coding
description:
  Electron transport complex protein RnfC; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily.


ensembl_gene_id: SAMN02745118_01504
symbol: SJZ67482.1
gene_biotype: protein_coding
description:
  Dihydrofolate synthase / folylpolyglutamate synthase; Belongs to the folylpolyglutamate synthase family.


ensembl_gene_id: SAMN02745118_01516
symbol: valS
gene_biotype: protein_coding
description:
  valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.


ensembl_gene_id: SAMN02745118_01518
symbol: ubiX
gene_biotype: protein_coding
description:
  4-hydroxy-3-polyprenylbenzoate decarboxylase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.


ensembl_gene_id: SAMN02745118_01520
symbol: mqnC
gene_biotype: protein_coding
description:
  Cyclic dehypoxanthinyl futalosine synthase; Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2).


ensembl_gene_id: SAMN02745118_01521
symbol: mqnA
gene_biotype: protein_coding
description:
  Futalosine synthase; Catalyzes the dehydration of chorismate into 3-[(1- carboxyvinyl)oxy]benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2).


ensembl_gene_id: SAMN02745118_01522
symbol: mqnE
gene_biotype: protein_coding
description:
  De-hypoxanthine futalosine cyclase; Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3-[(1-carboxyvinyl)oxy]benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate.


ensembl_gene_id: SAMN02745118_01526
symbol: engB
gene_biotype: protein_coding
description:
  GTP-binding protein; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.


ensembl_gene_id: SAMN02745118_01527
symbol: lon
gene_biotype: protein_coding
description:
  ATP-dependent proteinase. Serine peptidase. MEROPS family S16; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.


ensembl_gene_id: SAMN02745118_01529
symbol: clpX
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.


ensembl_gene_id: SAMN02745118_01530
symbol: clpP
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease, protease subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: SAMN02745118_01531
symbol: tig
gene_biotype: protein_coding
description:
  Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.


ensembl_gene_id: SAMN02745118_01538
symbol: SJZ68442.1
gene_biotype: protein_coding
description:
  XTP/dITP diphosphohydrolase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.


ensembl_gene_id: SAMN02745118_01539
symbol: rph
gene_biotype: protein_coding
description:
  RNAse PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation.


ensembl_gene_id: SAMN02745118_01551
symbol: glmE
gene_biotype: protein_coding
description:
  Glutamate mutase subunit E; Catalyzes the carbon skeleton rearrangement of L-glutamate to L-threo-3-methylaspartate ((2S,3S)-3-methylaspartate).


ensembl_gene_id: SAMN02745118_01553
symbol: glmS-2
gene_biotype: protein_coding
description:
  Glutamate mutase subunit S; Catalyzes the carbon skeleton rearrangement of L-glutamate to L-threo-3-methylaspartate ((2S,3S)-3-methylaspartate).


ensembl_gene_id: SAMN02745118_01555
symbol: hutG
gene_biotype: protein_coding
description:
  Formiminoglutamase; Catalyzes the conversion of N-formimidoyl-L-glutamate to L- glutamate and formamide; Belongs to the arginase family.


ensembl_gene_id: SAMN02745118_01565
symbol: SJZ69104.1
gene_biotype: protein_coding
description:
  Trimethylamine---corrinoid protein Co-methyltransferase; Belongs to the trimethylamine methyltransferase family.


ensembl_gene_id: SAMN02745118_01624
symbol: SJZ71540.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation/dephosphorylation.


ensembl_gene_id: SAMN02745118_01631
symbol: dnaG
gene_biotype: protein_coding
description:
  DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.


ensembl_gene_id: SAMN02745118_01632
symbol: sigA
gene_biotype: protein_coding
description:
  RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.


ensembl_gene_id: SAMN02745118_01636
symbol: SJZ71800.1
gene_biotype: protein_coding
description:
  Dinuclear metal center protein, YbgI/SA1388 family; Belongs to the GTP cyclohydrolase I type 2/NIF3 family.


ensembl_gene_id: SAMN02745118_01645
symbol: ruvA
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase subunit RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.


ensembl_gene_id: SAMN02745118_01646
symbol: ruvB
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase subunit RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.


ensembl_gene_id: SAMN02745118_01647
symbol: queA
gene_biotype: protein_coding
description:
  S-adenosylmethionine--tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).


ensembl_gene_id: SAMN02745118_01648
symbol: tgt
gene_biotype: protein_coding
description:
  tRNA-guanine transglycosylase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the [...]


ensembl_gene_id: SAMN02745118_01654
symbol: secD
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: SAMN02745118_01655
symbol: secF
gene_biotype: protein_coding
description:
  Protein translocase subunit secF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: SAMN02745118_01660
symbol: apt
gene_biotype: protein_coding
description:
  Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.


ensembl_gene_id: SAMN02745118_01661
symbol: SJZ72449.1
gene_biotype: protein_coding
description:
  GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.


ensembl_gene_id: SAMN02745118_01662
symbol: dtd
gene_biotype: protein_coding
description:
  D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family.


ensembl_gene_id: SAMN02745118_01667
symbol: aspS
gene_biotype: protein_coding
description:
  aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.


ensembl_gene_id: SAMN02745118_01675
symbol: iscS
gene_biotype: protein_coding
description:
  Cysteine desulfurase; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily.


ensembl_gene_id: SAMN02745118_01677
symbol: mnmA
gene_biotype: protein_coding
description:
  tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.


ensembl_gene_id: SAMN02745118_01684
symbol: SJZ74038.1
gene_biotype: protein_coding
description:
  neurotransmitter:Na+ symporter, NSS family; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.


ensembl_gene_id: SAMN02745118_01694
symbol: pth
gene_biotype: protein_coding
description:
  peptidyl-tRNA hydrolase, PTH1 family; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.


ensembl_gene_id: SAMN02745118_01695
symbol: rplY
gene_biotype: protein_coding
description:
  LSU ribosomal protein L25P; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.


ensembl_gene_id: SAMN02745118_01696
symbol: prs
gene_biotype: protein_coding
description:
  Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.


ensembl_gene_id: SAMN02745118_01697
symbol: glmU
gene_biotype: protein_coding
description:
  Glucosamine-1-phosphate N-acetyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain.


ensembl_gene_id: SAMN02745118_01705
symbol: ispE
gene_biotype: protein_coding
description:
  4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.


ensembl_gene_id: SAMN02745118_01735
symbol: rsmA
gene_biotype: protein_coding
description:
  16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.


ensembl_gene_id: SAMN02745118_01736
symbol: tal
gene_biotype: protein_coding
description:
  Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.


ensembl_gene_id: SAMN02745118_01739
symbol: metG
gene_biotype: protein_coding
description:
  methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.


ensembl_gene_id: SAMN02745118_01744
symbol: rsmI
gene_biotype: protein_coding
description:
  16S rRNA (cytidine1402-2'-O)-methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.


ensembl_gene_id: SAMN02745118_01751
symbol: tmk
gene_biotype: protein_coding
description:
  Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.


ensembl_gene_id: SAMN02745118_01756
symbol: guaB
gene_biotype: protein_coding
description:
  IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.


ensembl_gene_id: SAMN02745118_01768
symbol: SJZ77112.1
gene_biotype: protein_coding
description:
  Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.


ensembl_gene_id: SAMN02745118_01832
symbol: gyrA
gene_biotype: protein_coding
description:
  DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: SAMN02745118_01836
symbol: recF
gene_biotype: protein_coding
description:
  DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family.


ensembl_gene_id: SAMN02745118_01838
symbol: SJZ79680.1
gene_biotype: protein_coding
description:
  DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]


ensembl_gene_id: SAMN02745118_01839
symbol: dnaA
gene_biotype: protein_coding
description:
  Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.


ensembl_gene_id: SAMN02745118_01840
symbol: rnpA
gene_biotype: protein_coding
description:
  Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.


ensembl_gene_id: SAMN02745118_01841
symbol: SJZ79781.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.


ensembl_gene_id: SAMN02745118_01844
symbol: mnmE
gene_biotype: protein_coding
description:
  tRNA modification GTPase trmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.


ensembl_gene_id: SAMN02745118_01845
symbol: mnmG
gene_biotype: protein_coding
description:
  tRNA uridine 5-carboxymethylaminomethyl modification enzyme; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.


ensembl_gene_id: SAMN02745118_01847
symbol: rsmG
gene_biotype: protein_coding
description:
  16S rRNA m(7)G-527 methyltransferase; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.


ensembl_gene_id: SAMN02745118_01868
symbol: ychF
gene_biotype: protein_coding
description:
  Hypothetical protein; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.


ensembl_gene_id: SAMN02745118_01871
symbol: rpsR
gene_biotype: protein_coding
description:
  SSU ribosomal protein S18P; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.


ensembl_gene_id: SAMN02745118_01876
symbol: SJZ80940.1
gene_biotype: protein_coding
description:
  Primary replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.


ensembl_gene_id: SAMN02745118_01878
symbol: purA
gene_biotype: protein_coding
description:
  Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.


ensembl_gene_id: SAMN02745118_01881
symbol: purE
gene_biotype: protein_coding
description:
  5-(carboxyamino)imidazole ribonucleotide mutase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).


ensembl_gene_id: SAMN02745118_01885
symbol: purS
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to assist in  [...]


ensembl_gene_id: SAMN02745118_01886
symbol: purQ
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase subunit I; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to  [...]


ensembl_gene_id: SAMN02745118_01887
symbol: purL
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase subunit II; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to [...]


ensembl_gene_id: SAMN02745118_01888
symbol: purF
gene_biotype: protein_coding
description:
  Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.


ensembl_gene_id: SAMN02745118_01890
symbol: purN
gene_biotype: protein_coding
description:
  Formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.


ensembl_gene_id: SAMN02745118_01892
symbol: trpE-2
gene_biotype: protein_coding
description:
  Aminodeoxychorismate synthase, subunit I; Part of a heterotetrameric complex that catalyzes the two- step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine-binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high c [...]


ensembl_gene_id: SAMN02745118_01894
symbol: ilvE-2
gene_biotype: protein_coding
description:
  Branched-chain amino acid aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: SAMN02745118_01897
symbol: lgt
gene_biotype: protein_coding
description:
  Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.


ensembl_gene_id: SAMN02745118_01898
symbol: rex
gene_biotype: protein_coding
description:
  Redox-sensing transcriptional repressor; Modulates transcription in response to changes in cellular NADH/NAD(+) redox state.


ensembl_gene_id: SAMN02745118_01904
symbol: SJZ81708.1
gene_biotype: protein_coding
description:
  Formate dehydrogenase major subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: SAMN02745118_01905
symbol: fdhD
gene_biotype: protein_coding
description:
  FdhD protein; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.


ensembl_gene_id: SAMN02745118_01918
symbol: SJZ82615.1
gene_biotype: protein_coding
description:
  Type I restriction enzyme, R subunit; Subunit R is required for both nuclease and ATPase activities, but not for modification.


ensembl_gene_id: SAMN02745118_01974
symbol: SJZ83919.1
gene_biotype: protein_coding
description:
  Uncharacterized peroxidase-related enzyme; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.


ensembl_gene_id: SAMN02745118_02000
symbol: SJZ85360.1
gene_biotype: protein_coding
description:
  Two-component system, response regulator, stage 0 sporulation protein A; May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process.


ensembl_gene_id: SAMN02745118_02002
symbol: SJZ85417.1
gene_biotype: protein_coding
description:
  DNA repair protein RecN (Recombination protein N); May be involved in recombinational repair of damaged DNA.


ensembl_gene_id: SAMN02745118_02004
symbol: nadK
gene_biotype: protein_coding
description:
  NAD+ kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.


ensembl_gene_id: SAMN02745118_02006
symbol: dxs
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.


ensembl_gene_id: SAMN02745118_02009
symbol: xseB
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.


ensembl_gene_id: SAMN02745118_02010
symbol: xseA
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.


ensembl_gene_id: SAMN02745118_02011
symbol: folD
gene_biotype: protein_coding
description:
  Methenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.


ensembl_gene_id: SAMN02745118_02013
symbol: nusB
gene_biotype: protein_coding
description:
  NusB antitermination factor; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.


ensembl_gene_id: SAMN02745118_02017
symbol: SJZ85693.1
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase, biotin carboxylase subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: SAMN02745118_02027
symbol: efp
gene_biotype: protein_coding
description:
  Translation elongation factor P (EF-P); Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.


ensembl_gene_id: SAMN02745118_02029
symbol: aroQ
gene_biotype: protein_coding
description:
  3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.


ensembl_gene_id: SAMN02745118_02030
symbol: aroB
gene_biotype: protein_coding
description:
  3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).


ensembl_gene_id: SAMN02745118_02031
symbol: aroK
gene_biotype: protein_coding
description:
  Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.


ensembl_gene_id: SAMN02745118_02032
symbol: aroC
gene_biotype: protein_coding
description:
  Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.


ensembl_gene_id: SAMN02745118_02044
symbol: SJZ86260.1
gene_biotype: protein_coding
description:
  Leader peptidase (prepilin peptidase) / N-methyltransferase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.


ensembl_gene_id: SAMN02745118_02050
symbol: aroE
gene_biotype: protein_coding
description:
  Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).


ensembl_gene_id: SAMN02745118_02061
symbol: SJZ86652.1
gene_biotype: protein_coding
description:
  Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.


ensembl_gene_id: SAMN02745118_02073
symbol: glpK
gene_biotype: protein_coding
description:
  Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.


ensembl_gene_id: SAMN02745118_02078
symbol: nth
gene_biotype: protein_coding
description:
  DNA-(apurinic or apyrimidinic site) lyase; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.


ensembl_gene_id: SAMN02745118_02105
symbol: SJZ88751.1
gene_biotype: protein_coding
description:
  Putrescine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: SAMN02745118_02121
symbol: SJZ89172.1
gene_biotype: protein_coding
description:
  Molybdopterin molybdotransferase; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.


ensembl_gene_id: SAMN02745118_02132
symbol: SJZ89542.1
gene_biotype: protein_coding
description:
  Tat (twin-arginine translocation) pathway signal sequence; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: SAMN02745118_02136
symbol: SJZ89608.1
gene_biotype: protein_coding
description:
  Metal-binding trascriptional regulator, contains putative Fe-S cluster and ArsR family DNA binding domain.


ensembl_gene_id: SAMN02745118_02152
symbol: SJZ89949.1
gene_biotype: protein_coding
description:
  Thiosulfate reductase / polysulfide reductase chain A; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: SAMN02745118_02160
symbol: cas1
gene_biotype: protein_coding
description:
  CRISP-associated protein Cas1; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.


ensembl_gene_id: SAMN02745118_02161
symbol: cas2
gene_biotype: protein_coding
description:
  CRISPR-associated protein Cas2; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.


ensembl_gene_id: SAMN02745118_02162
symbol: SJZ90870.1
gene_biotype: protein_coding
description:
  CRISPR-associated exonuclease Cas4; CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Belongs to the CRISPR-associated exonuclease Cas4 family.


ensembl_gene_id: SAMN02745118_02178
symbol: tmcAL
gene_biotype: protein_coding
description:
  Predicted nucleotidyltransferase; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of elongator tRNA(Met), using acetate and ATP as substrates. First activates an acetate ion to form acetyladenylate (Ac- AMP) and then transfers the acetyl group to tRNA to form ac(4)C34.


ensembl_gene_id: SAMN02745118_02184
symbol: kdgT
gene_biotype: protein_coding
description:
  2-keto-3-deoxygluconate permease (TC 2.A.10.1.1); The 2-keto-3-deoxygluconate permease transports the degraded pectin products into the bacterial cell, where they serve as carbon and energy sources. This is a hydrogen coupled transport system. Belongs to the KdgT transporter family.


ensembl_gene_id: SAMN02745118_02189
symbol: SJZ91471.1
gene_biotype: protein_coding
description:
  L-threonine synthase; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine.


ensembl_gene_id: SAMN02745118_02202
symbol: ade
gene_biotype: protein_coding
description:
  Adenine deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family.


ensembl_gene_id: SAMN02745118_02217
symbol: SJZ92587.1
gene_biotype: protein_coding
description:
  Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.


ensembl_gene_id: SAMN02745118_02218
symbol: mobA
gene_biotype: protein_coding
description:
  Molybdopterin-guanine dinucleotide biosynthesis protein A; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor.


ensembl_gene_id: SAMN02745118_02221
symbol: napA
gene_biotype: protein_coding
description:
  Nitrate reductase NapA; Catalytic subunit of the nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite.


ensembl_gene_id: SAMN02745118_02228
symbol: SJZ92846.1
gene_biotype: protein_coding
description:
  Septum formation protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.


ensembl_gene_id: SAMN02745118_02234
symbol: minC
gene_biotype: protein_coding
description:
  Septum site-determining protein MinC; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family.


ensembl_gene_id: SAMN02745118_02236
symbol: minE
gene_biotype: protein_coding
description:
  Cell division topological specificity factor MinE; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell.


ensembl_gene_id: SAMN02745118_02237
symbol: rodA
gene_biotype: protein_coding
description:
  Rod shape determining protein RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.


ensembl_gene_id: SAMN02745118_02240
symbol: rplU
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.


ensembl_gene_id: SAMN02745118_02243
symbol: obg
gene_biotype: protein_coding
description:
  GTP-binding protein; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.


ensembl_gene_id: SAMN02745118_02245
symbol: proB
gene_biotype: protein_coding
description:
  Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.


ensembl_gene_id: SAMN02745118_02246
symbol: proA
gene_biotype: protein_coding
description:
  Glutamate-5-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.


ensembl_gene_id: SAMN02745118_02247
symbol: SJZ93107.1
gene_biotype: protein_coding
description:
  Cytochrome c-type biogenesis protein CcmE; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH.


ensembl_gene_id: SAMN02745118_02264
symbol: nadD
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).


ensembl_gene_id: SAMN02745118_02267
symbol: rsfS
gene_biotype: protein_coding
description:
  Ribosome-associated protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.


ensembl_gene_id: SAMN02745118_02281
symbol: thrS
gene_biotype: protein_coding
description:
  threonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr).


ensembl_gene_id: SAMN02745118_02288
symbol: SJZ94324.1
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate--protein phosphotransferase; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr).


ensembl_gene_id: SAMN02745118_02291
symbol: SJZ94481.1
gene_biotype: protein_coding
description:
  PTS system D-glucosamine-specific IIA component, Glc family (TC 4.A.1.1.6)/PTS system D-glucosamine-specific IIB component, Glc family (TC 4.A.1.1.6)/PTS system D-glucosamine-specific IIC component, Glc family (TC 4.A.1.1.6).


ensembl_gene_id: SAMN02745118_02318
symbol: rnfD-2
gene_biotype: protein_coding
description:
  Na+-transporting NADH:ubiquinone oxidoreductase subunit B; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family.


ensembl_gene_id: SAMN02745118_02344
symbol: era
gene_biotype: protein_coding
description:
  GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.


ensembl_gene_id: SAMN02745118_02346
symbol: SJZ96211.1
gene_biotype: protein_coding
description:
  Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: SAMN02745118_02349
symbol: ybeY
gene_biotype: protein_coding
description:
  Probable rRNA maturation factor; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.


ensembl_gene_id: SAMN02745118_02360
symbol: SJZ96464.1
gene_biotype: protein_coding
description:
  16S rRNA (uracil1498-N3)-methyltransferase; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.


ensembl_gene_id: SAMN02745118_02361
symbol: prmA
gene_biotype: protein_coding
description:
  Ribosomal protein L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family.


ensembl_gene_id: SAMN02745118_02362
symbol: dnaJ
gene_biotype: protein_coding
description:
  Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...]


ensembl_gene_id: SAMN02745118_02364
symbol: grpE
gene_biotype: protein_coding
description:
  Molecular chaperone GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP [...]


ensembl_gene_id: SAMN02745118_02365
symbol: hrcA
gene_biotype: protein_coding
description:
  Heat-inducible transcription repressor HrcA; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons.


ensembl_gene_id: SAMN02745118_02366
symbol: SJZ96558.1
gene_biotype: protein_coding
description:
  Oxygen-independent coproporphyrinogen-3 oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: SAMN02745118_02367
symbol: lepA
gene_biotype: protein_coding
description:
  GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.


ensembl_gene_id: SAMN02745118_02369
symbol: gpr
gene_biotype: protein_coding
description:
  Spore protease; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.


ensembl_gene_id: SAMN02745118_02392
symbol: dapF
gene_biotype: protein_coding
description:
  Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.


ensembl_gene_id: SAMN02745118_02394
symbol: pfkA
gene_biotype: protein_coding
description:
  6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.


ensembl_gene_id: SAMN02745118_02395
symbol: accA
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase carboxyltransferase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.


ensembl_gene_id: SAMN02745118_02396
symbol: accD
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase carboxyl transferase subunit beta; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.


ensembl_gene_id: SAMN02745118_02410
symbol: rpsJ
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.


ensembl_gene_id: SAMN02745118_02411
symbol: rplC
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.


ensembl_gene_id: SAMN02745118_02413
symbol: rplW
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.


ensembl_gene_id: SAMN02745118_02414
symbol: rplB
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.


ensembl_gene_id: SAMN02745118_02415
symbol: rpsS
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.


ensembl_gene_id: SAMN02745118_02416
symbol: rplV
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.


ensembl_gene_id: SAMN02745118_02417
symbol: rpsC
gene_biotype: protein_coding
description:
  SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.


ensembl_gene_id: SAMN02745118_02418
symbol: rplP
gene_biotype: protein_coding
description:
  LSU ribosomal protein L16P; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.


ensembl_gene_id: SAMN02745118_02420
symbol: rpsQ
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.


ensembl_gene_id: SAMN02745118_02421
symbol: rplN
gene_biotype: protein_coding
description:
  LSU ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.


ensembl_gene_id: SAMN02745118_02422
symbol: rplX
gene_biotype: protein_coding
description:
  LSU ribosomal protein L24P; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.


ensembl_gene_id: SAMN02745118_02423
symbol: rplE
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.


ensembl_gene_id: SAMN02745118_02425
symbol: rpsH
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.


ensembl_gene_id: SAMN02745118_02426
symbol: rplF
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.


ensembl_gene_id: SAMN02745118_02427
symbol: rplR
gene_biotype: protein_coding
description:
  LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.


ensembl_gene_id: SAMN02745118_02428
symbol: rpsE
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.


ensembl_gene_id: SAMN02745118_02429
symbol: rplO
gene_biotype: protein_coding
description:
  LSU ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.


ensembl_gene_id: SAMN02745118_02430
symbol: secY
gene_biotype: protein_coding
description:
  Protein translocase subunit secY/sec61 alpha; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.


ensembl_gene_id: SAMN02745118_02431
symbol: adk
gene_biotype: protein_coding
description:
  Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.


ensembl_gene_id: SAMN02745118_02432
symbol: map
gene_biotype: protein_coding
description:
  Methionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.


ensembl_gene_id: SAMN02745118_02433
symbol: infA
gene_biotype: protein_coding
description:
  Bacterial translation initiation factor 1 (bIF-1); One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.


ensembl_gene_id: SAMN02745118_02434
symbol: rpsM
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.


ensembl_gene_id: SAMN02745118_02435
symbol: rpsK
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.


ensembl_gene_id: SAMN02745118_02436
symbol: rpsD
gene_biotype: protein_coding
description:
  SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.


ensembl_gene_id: SAMN02745118_02437
symbol: rpoA
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: SAMN02745118_02439
symbol: ecfA
gene_biotype: protein_coding
description:
  Energy-coupling factor transport system ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.


ensembl_gene_id: SAMN02745118_02441
symbol: ecfT
gene_biotype: protein_coding
description:
  Energy-coupling factor transport system permease protein; Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.


ensembl_gene_id: SAMN02745118_02442
symbol: truA
gene_biotype: protein_coding
description:
  tRNA pseudouridine38-40 synthase; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.


ensembl_gene_id: SAMN02745118_02443
symbol: rplM
gene_biotype: protein_coding
description:
  LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.


ensembl_gene_id: SAMN02745118_02447
symbol: SJZ99094.1
gene_biotype: protein_coding
description:
  Uncharacterized protein, PH0010 family/AmmeMemoRadiSam system protein A/AmmeMemoRadiSam system protein B.


ensembl_gene_id: SAMN02745118_02465
symbol: SJZ99829.1
gene_biotype: protein_coding
description:
  D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: SAMN02745118_02512
symbol: radA
gene_biotype: protein_coding
description:
  DNA repair protein RadA/Sms; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.


ensembl_gene_id: SAMN02745118_02513
symbol: disA
gene_biotype: protein_coding
description:
  Diadenylate cyclase; Has also diadenylate cyclase activity, catalyzing the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c-di-AMP acts as a signaling molecule that couples DNA integrity with progression of sporulation. The rise in c-di-AMP level generated by DisA while scanning the chromosome, operates as a positive signal that advances sporulation; upon encountering a lesion, the DisA focus arrests at the damaged site and halts c-di-AMP synthesis.


ensembl_gene_id: SAMN02745118_02516
symbol: ispD
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP).


ensembl_gene_id: SAMN02745118_02517
symbol: ispF
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP).


ensembl_gene_id: SAMN02745118_02519
symbol: gltX
gene_biotype: protein_coding
description:
  Nondiscriminating glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.


ensembl_gene_id: SAMN02745118_02522
symbol: mrnC
gene_biotype: protein_coding
description:
  Ribonuclease-3 family protein; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family.


ensembl_gene_id: SAMN02745118_02523
symbol: thyX
gene_biotype: protein_coding
description:
  Thymidylate synthase (FAD); Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant.


ensembl_gene_id: SAMN02745118_02524
symbol: SKA01624.1
gene_biotype: protein_coding
description:
  23S rRNA (guanosine2251-2'-O)-methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: SAMN02745118_02532
symbol: pyrE
gene_biotype: protein_coding
description:
  Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).


ensembl_gene_id: SAMN02745118_02534
symbol: pyrK
gene_biotype: protein_coding
description:
  Dihydroorotate dehydrogenase electron transfer subunit; Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD(+).


ensembl_gene_id: SAMN02745118_02538
symbol: pyrC
gene_biotype: protein_coding
description:
  Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.


ensembl_gene_id: SAMN02745118_02539
symbol: pyrB
gene_biotype: protein_coding
description:
  Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.


ensembl_gene_id: SAMN02745118_02542
symbol: pyrR
gene_biotype: protein_coding
description:
  Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant; Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrR subfamily.


ensembl_gene_id: SAMN02745118_02546
symbol: SKA02617.1
gene_biotype: protein_coding
description:
  23S rRNA pseudouridine1911/1915/1917 synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: SAMN02745118_02547
symbol: lspA
gene_biotype: protein_coding
description:
  Signal peptidase II; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.


ensembl_gene_id: SAMN02745118_02596
symbol: SKA04397.1
gene_biotype: protein_coding
description:
  RNA polymerase, sigma 27/28 subunit, RpsK/SigK; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: SAMN02745118_02600
symbol: mltG
gene_biotype: protein_coding
description:
  UPF0755 protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family.


ensembl_gene_id: SAMN02745118_02603
symbol: SKA04545.1
gene_biotype: protein_coding
description:
  Putative holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.


ensembl_gene_id: SAMN02745118_02606
symbol: alaS
gene_biotype: protein_coding
description:
  alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.


ensembl_gene_id: SAMN02745118_02611
symbol: tyrS
gene_biotype: protein_coding
description:
  tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 2 subfamily.


ensembl_gene_id: SAMN02745118_02613
symbol: mutS2
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS2; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.


ensembl_gene_id: SAMN02745118_02617
symbol: SKA04840.1
gene_biotype: protein_coding
description:
  Cell division protein ZapA; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.


ensembl_gene_id: SAMN02745118_02637
symbol: recR
gene_biotype: protein_coding
description:
  DNA replication and repair protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.


ensembl_gene_id: SAMN02745118_02638
symbol: SKA05459.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.


ensembl_gene_id: SAMN02745118_02639
symbol: dnaX
gene_biotype: protein_coding
description:
  DNA polymerase-3 subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: SAMN02745118_02642
symbol: tadA
gene_biotype: protein_coding
description:
  tRNA(adenine34) deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: SAMN02745118_02648
symbol: serS
gene_biotype: protein_coding
description:
  seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).


ensembl_gene_id: SAMN02745118_02658
symbol: SKA06075.1
gene_biotype: protein_coding
description:
  Lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.


ensembl_gene_id: SAMN02745118_02698
symbol: panB
gene_biotype: protein_coding
description:
  Ketopantoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family.


ensembl_gene_id: SAMN02745118_02699
symbol: panC
gene_biotype: protein_coding
description:
  Pantothenate synthetase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.


ensembl_gene_id: SAMN02745118_02700
symbol: panD
gene_biotype: protein_coding
description:
  L-aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.


ensembl_gene_id: SAMN02745118_02701
symbol: birA
gene_biotype: protein_coding
description:
  Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.


ensembl_gene_id: SAMN02745118_02703
symbol: coaX
gene_biotype: protein_coding
description:
  Pantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.


ensembl_gene_id: SAMN02745118_02704
symbol: SKA07491.1
gene_biotype: protein_coding
description:
  tRNA-U20-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.


ensembl_gene_id: SAMN02745118_02716
symbol: infC
gene_biotype: protein_coding
description:
  Bacterial translation initiation factor 3 (bIF-3); IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.


ensembl_gene_id: SAMN02745118_02718
symbol: rplT
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.


ensembl_gene_id: SAMN02745118_02730
symbol: SKA08194.1
gene_biotype: protein_coding
description:
  RNA methyltransferase, TrmH family; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: SAMN02745118_02732
symbol: pheS
gene_biotype: protein_coding
description:
  phenylalanyl-tRNA synthetase, alpha subunit; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.


ensembl_gene_id: SAMN02745118_02733
symbol: pheT
gene_biotype: protein_coding
description:
  phenylalanyl-tRNA synthetase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.


ensembl_gene_id: SAMN02745118_02736
symbol: secE
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.


ensembl_gene_id: SAMN02745118_02737
symbol: nusG
gene_biotype: protein_coding
description:
  Transcription antitermination protein nusG; Participates in transcription elongation, termination and antitermination.


ensembl_gene_id: SAMN02745118_02738
symbol: rplK
gene_biotype: protein_coding
description:
  LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.


ensembl_gene_id: SAMN02745118_02739
symbol: rplA
gene_biotype: protein_coding
description:
  LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.


ensembl_gene_id: SAMN02745118_02740
symbol: rplJ
gene_biotype: protein_coding
description:
  LSU ribosomal protein L10P; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.


ensembl_gene_id: SAMN02745118_02741
symbol: rplL
gene_biotype: protein_coding
description:
  LSU ribosomal protein L12P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.


ensembl_gene_id: SAMN02745118_02742
symbol: rpoB
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: SAMN02745118_02744
symbol: rpsL
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.


ensembl_gene_id: SAMN02745118_02745
symbol: rpsG
gene_biotype: protein_coding
description:
  SSU ribosomal protein S7P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.


ensembl_gene_id: SAMN02745118_02746
symbol: fusA
gene_biotype: protein_coding
description:
  Elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.


ensembl_gene_id: SAMN02745118_02751
symbol: SKA08767.1
gene_biotype: protein_coding
description:
  UDP-N-acetyl-D-galactosamine dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.


ensembl_gene_id: SAMN02745118_02776
symbol: selA
gene_biotype: protein_coding
description:
  L-seryl-tRNA(Sec) selenium transferase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis.


ensembl_gene_id: SAMN02745118_02780
symbol: SKA09454.1
gene_biotype: protein_coding
description:
  NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC.


ensembl_gene_id: SAMN02745118_02785
symbol: SKA09525.1
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing); Belongs to the UDP-N-acetylglucosamine 2-epimerase family.


ensembl_gene_id: SAMN02745118_02815
symbol: ftsH
gene_biotype: protein_coding
description:
  Cell division protease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family.  In the central section; belongs to the AAA ATPase family.


ensembl_gene_id: SAMN02745118_02816
symbol: SKA10952.1
gene_biotype: protein_coding
description:
  Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.


ensembl_gene_id: SAMN02745118_02817
symbol: tilS
gene_biotype: protein_coding
description:
  tRNA(Ile)-lysidine synthase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.


ensembl_gene_id: SAMN02745118_02850
symbol: thiE
gene_biotype: protein_coding
description:
  Thiamine-phosphate diphosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.


ensembl_gene_id: SAMN02745118_02851
symbol: thiC
gene_biotype: protein_coding
description:
  Hydroxymethylpyrimidine synthase; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. Belongs to the ThiC family.


# pathwayInfo

id: CL:1011
description: Glycine, serine and threonine metabolism, and Cysteine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1011_Glycine,_serine_and_threonine_metabolism,_and_Cysteine_metabolic_process


id: CL:1012
description: Glycine, serine and threonine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1012_Glycine,_serine_and_threonine_metabolism


id: CL:1016
description: Threonine biosynthesis, and ACT domain
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1016_Threonine_biosynthesis,_and_ACT_domain


id: CL:1028
description: L-serine biosynthetic process, and L-serine ammonia-lyase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1028_L-serine_biosynthetic_process,_and_L-serine_ammonia-lyase_activity


id: CL:1038
description: Cysteine biosynthetic process from serine
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1038_Cysteine_biosynthetic_process_from_serine


id: CL:1052
description: Aromatic amino acid family biosynthetic process, and ADC synthase
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1052_Aromatic_amino_acid_family_biosynthetic_process,_and_ADC_synthase


id: CL:1053
description: Aromatic amino acid family biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1053_Aromatic_amino_acid_family_biosynthetic_process


id: CL:1055
description: Novobiocin biosynthesis, and Chorismate mutase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1055_Novobiocin_biosynthesis,_and_Chorismate_mutase_activity


id: CL:1097
description: Mixed, incl. ADP binding, and glycyl-tRNA aminoacylation
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1097_Mixed,_incl._ADP_binding,_and_glycyl-tRNA_aminoacylation


id: CL:1111
description: glycyl-tRNA aminoacylation, and UBA-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1111_glycyl-tRNA_aminoacylation,_and_UBA-like_superfamily


id: CL:1120
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1120_Mixed,_incl._Isoprenoid_biosynthetic_process,_and_Exonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_5-phosphomonoesters

description:
  Mixed, incl. Isoprenoid biosynthetic process, and Exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5-phosphomonoesters


id: CL:1121
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1121_Mixed,_incl._Isoprenoid_biosynthetic_process,_and_Exonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_5-phosphomonoesters

description:
  Mixed, incl. Isoprenoid biosynthetic process, and Exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5-phosphomonoesters


id: CL:1123
description: Mixed, incl. Isoprene biosynthesis, and Polyprenol metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1123_Mixed,_incl._Isoprene_biosynthesis,_and_Polyprenol_metabolic_process


id: CL:1125
description: Mixed, incl. Polyprenol metabolic process, and AI-2E family transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1125_Mixed,_incl._Polyprenol_metabolic_process,_and_AI-2E_family_transporter


id: CL:1149
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1149_Mixed,_incl._Exonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_5-phosphomonoesters,_and_Polyprenyl_synthetase

description:
  Mixed, incl. Exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5-phosphomonoesters, and Polyprenyl synthetase


id: CL:1150
description: Mixed, incl. DNA catabolic process, and NAD+ kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1150_Mixed,_incl._DNA_catabolic_process,_and_NAD+_kinase_activity


id: CL:1164
description: Ribonuclease J, and Polyprenyl synthetase
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1164_Ribonuclease_J,_and_Polyprenyl_synthetase


id: CL:1176
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1176_Mixed,_incl._RNA_polymerase_sigma_factor,_region_3/4-like,_and_Domain_in_cystathionine_beta-synthase_and_other_proteins.

description:
  Mixed, incl. RNA polymerase sigma factor, region 3/4-like, and Domain in cystathionine beta-synthase and other proteins.


id: CL:1178
description: Mixed, incl. Response to metal ion, and Helix-hairpin-helix motif
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1178_Mixed,_incl._Response_to_metal_ion,_and_Helix-hairpin-helix_motif


id: CL:1192
description: Mixed, incl. MatE, and Ribonuclease III domain
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1192_Mixed,_incl._MatE,_and_Ribonuclease_III_domain


id: CL:1203
description: Mixed, incl. Cell cycle process, and Nucleoside recognition
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1203_Mixed,_incl._Cell_cycle_process,_and_Nucleoside_recognition


id: CL:1204
description: Mixed, incl. Cell cycle process, and Nucleoside recognition
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1204_Mixed,_incl._Cell_cycle_process,_and_Nucleoside_recognition


id: CL:1205
description: Mixed, incl. Chromosome segregation, and DHH family
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1205_Mixed,_incl._Chromosome_segregation,_and_DHH_family


id: CL:1207
description: Chromosome partition, and DHH family
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1207_Chromosome_partition,_and_DHH_family


id: CL:122
description: Mixed, incl. Small ribosomal subunit, and Translation elongation factor EF1B/ribosomal protein S6
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:122_Mixed,_incl._Small_ribosomal_subunit,_and_Translation_elongation_factor_EF1B/ribosomal_protein_S6


id: CL:1226
description: Nucleoside recognition, and Alba-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1226_Nucleoside_recognition,_and_Alba-like_domain_superfamily


id: CL:1237
description: Mixed, incl. GIY-YIG endonuclease, and O-methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1237_Mixed,_incl._GIY-YIG_endonuclease,_and_O-methyltransferase_activity


id: CL:1250
description: Mixed, incl. Regulation of cell shape, and Cell division
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1250_Mixed,_incl._Regulation_of_cell_shape,_and_Cell_division


id: CL:1252
description: Mixed, incl. Regulation of cell shape, and Cationic antimicrobial peptide (CAMP) resistance
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1252_Mixed,_incl._Regulation_of_cell_shape,_and_Cationic_antimicrobial_peptide_(CAMP)_resistance


id: CL:1253
description: Cell cycle, and Regulation of cell shape
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1253_Cell_cycle,_and_Regulation_of_cell_shape


id: CL:1255
description: Cell shape, and Cell division site
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1255_Cell_shape,_and_Cell_division_site


id: CL:1299
description: Regulation of cell cycle, and Regulation of cell shape
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1299_Regulation_of_cell_cycle,_and_Regulation_of_cell_shape


id: CL:1301
description: Mixed, incl. Actin, and Cell cycle protein
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1301_Mixed,_incl._Actin,_and_Cell_cycle_protein


id: CL:1322
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1322_Cationic_antimicrobial_peptide_(CAMP)_resistance,_and_Serine-type_D-Ala-D-Ala_carboxypeptidase_activity

description:
  Cationic antimicrobial peptide (CAMP) resistance, and Serine-type D-Ala-D-Ala carboxypeptidase activity


id: CL:1324
description: Mixed, incl. Ami_3, and Serine-type D-Ala-D-Ala carboxypeptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1324_Mixed,_incl._Ami_3,_and_Serine-type_D-Ala-D-Ala_carboxypeptidase_activity


id: CL:1344
description: Serine-type D-Ala-D-Ala carboxypeptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1344_Serine-type_D-Ala-D-Ala_carboxypeptidase_activity


id: CL:1370
description: Mixed, incl. Phosphate ion transport, and AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1370_Mixed,_incl._Phosphate_ion_transport,_and_AAA_domain


id: CL:1372
description: Mixed, incl. Phosphate ion transport, and Quorum sensing
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1372_Mixed,_incl._Phosphate_ion_transport,_and_Quorum_sensing


id: CL:1374
description: Mixed, incl. NADP oxidoreductase coenzyme F420-dependent, and Thylakoid
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1374_Mixed,_incl._NADP_oxidoreductase_coenzyme_F420-dependent,_and_Thylakoid


id: CL:1405
description: Mixed, incl. Carbohydrate metabolic process, and O-Antigen nucleotide sugar biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1405_Mixed,_incl._Carbohydrate_metabolic_process,_and_O-Antigen_nucleotide_sugar_biosynthesis


id: CL:1406
description: Carbohydrate metabolic process, and O-Antigen nucleotide sugar biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1406_Carbohydrate_metabolic_process,_and_O-Antigen_nucleotide_sugar_biosynthesis


id: CL:1407
description: Carbohydrate metabolic process, and O-Antigen nucleotide sugar biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1407_Carbohydrate_metabolic_process,_and_O-Antigen_nucleotide_sugar_biosynthesis


id: CL:1408
description: Carbohydrate metabolic process, and O-Antigen nucleotide sugar biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1408_Carbohydrate_metabolic_process,_and_O-Antigen_nucleotide_sugar_biosynthesis


id: CL:1409
description: Carbohydrate metabolic process, and O-Antigen nucleotide sugar biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1409_Carbohydrate_metabolic_process,_and_O-Antigen_nucleotide_sugar_biosynthesis


id: CL:1410
description: Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and Polysaccharide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1410_Mixed,_incl._O-Antigen_nucleotide_sugar_biosynthesis,_and_Polysaccharide_biosynthetic_process


id: CL:1411
description: O-Antigen nucleotide sugar biosynthesis, and Polysaccharide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1411_O-Antigen_nucleotide_sugar_biosynthesis,_and_Polysaccharide_biosynthetic_process


id: CL:1412
description: O-Antigen nucleotide sugar biosynthesis, and Nucleotide-diphospho-sugar transferases
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1412_O-Antigen_nucleotide_sugar_biosynthesis,_and_Nucleotide-diphospho-sugar_transferases


id: CL:1413
description: O-Antigen nucleotide sugar biosynthesis, and Nucleotide-diphospho-sugar transferases
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1413_O-Antigen_nucleotide_sugar_biosynthesis,_and_Nucleotide-diphospho-sugar_transferases


id: CL:1416
description: O-Antigen nucleotide sugar biosynthesis, and Nucleotide-diphospho-sugar transferases
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1416_O-Antigen_nucleotide_sugar_biosynthesis,_and_Nucleotide-diphospho-sugar_transferases


id: CL:1418
description: Mixed, incl. Cytidylyltransferase, and RmlD substrate binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1418_Mixed,_incl._Cytidylyltransferase,_and_RmlD_substrate_binding_domain


id: CL:1435
description: Mixed, incl. NAD(P)-binding domain, and Polyketide sugar unit biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1435_Mixed,_incl._NAD(P)-binding_domain,_and_Polyketide_sugar_unit_biosynthesis


id: CL:1455
description: Mixed, incl. Cupin domain, and UDP-glucuronate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1455_Mixed,_incl._Cupin_domain,_and_UDP-glucuronate_metabolic_process


id: CL:147
description: Large ribosomal subunit, and rRNA-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:147_Large_ribosomal_subunit,_and_rRNA-binding


id: CL:1470
description: Mixed, incl. Polysaccharide biosynthesis protein, CapD-like domain, and Bacterial sugar transferase
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1470_Mixed,_incl._Polysaccharide_biosynthesis_protein,_CapD-like_domain,_and_Bacterial_sugar_transferase


id: CL:1485
description: Mixed, incl. Tyrosine kinase, G-rich domain, and Protein tyrosine phosphatase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1485_Mixed,_incl._Tyrosine_kinase,_G-rich_domain,_and_Protein_tyrosine_phosphatase_activity


id: CL:1498
description: Mixed, incl. Glycosyltransferase Family 4, and Protein glycosylation
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1498_Mixed,_incl._Glycosyltransferase_Family_4,_and_Protein_glycosylation


id: CL:1501
description: Mixed, incl. Sulfotransferase family, and Glycosyltransferase Family 4
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1501_Mixed,_incl._Sulfotransferase_family,_and_Glycosyltransferase_Family_4


id: CL:1523
description: Mixed, incl. Starch and sucrose metabolism, and Carbohydrate catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1523_Mixed,_incl._Starch_and_sucrose_metabolism,_and_Carbohydrate_catabolic_process


id: CL:1524
description: Mixed, incl. Carbohydrate catabolic process, and Carbohydrate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1524_Mixed,_incl._Carbohydrate_catabolic_process,_and_Carbohydrate_transport


id: CL:1525
description: Glycolysis / Gluconeogenesis, and Phosphotransferase system (PTS)
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1525_Glycolysis_/_Gluconeogenesis,_and_Phosphotransferase_system_(PTS)


id: CL:1526
description: Glycolytic process, and Phosphotransferase system
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1526_Glycolytic_process,_and_Phosphotransferase_system


id: CL:1529
description: Glycolysis, and Aldehyde-lyase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1529_Glycolysis,_and_Aldehyde-lyase_activity


id: CL:1532
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1532_Glycolysis,_and_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_NAD_or_NADP_as_acceptor

description:
  Glycolysis, and Oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor


id: CL:1563
description: Mixed, incl. Alpha-D-phosphohexomutase, C-terminal, and Amino sugar metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1563_Mixed,_incl._Alpha-D-phosphohexomutase,_C-terminal,_and_Amino_sugar_metabolic_process


id: CL:1578
description: Mixed, incl. Periplasmic binding protein-like I, and GroES-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1578_Mixed,_incl._Periplasmic_binding_protein-like_I,_and_GroES-like_superfamily


id: CL:1581
description: Carbohydrate binding, and Carbohydrate kinase PfkB
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1581_Carbohydrate_binding,_and_Carbohydrate_kinase_PfkB


id: CL:1597
description: Starch and sucrose metabolism, and Protein of unknown function DUF4912
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1597_Starch_and_sucrose_metabolism,_and_Protein_of_unknown_function_DUF4912


id: CL:1600
description: Glycogen biosynthesis, and Glycoside hydrolase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1600_Glycogen_biosynthesis,_and_Glycoside_hydrolase_superfamily


id: CL:1616
description: Alpha-glucan metabolic process, and Protein of unknown function DUF4912
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1616_Alpha-glucan_metabolic_process,_and_Protein_of_unknown_function_DUF4912


id: CL:1628
description: Mixed, incl. Regulation of carbohydrate metabolic process, and Creatinase, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1628_Mixed,_incl._Regulation_of_carbohydrate_metabolic_process,_and_Creatinase,_N-terminal


id: CL:1643
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1643_Mixed,_incl._Exopolysaccharide_biosynthesis_polyprenyl_glycosylphosphotransferase,_and_O-Antigen_ligase

description:
  Mixed, incl. Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase, and O-Antigen ligase


id: CL:1652
description: Mixed, incl. Metalloenzyme superfamily, and Lysyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1652_Mixed,_incl._Metalloenzyme_superfamily,_and_Lysyltransferase_activity


id: CL:1663
description: Mixed, incl. TPR repeat, and DNA polymerase alpha chain like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1663_Mixed,_incl._TPR_repeat,_and_DNA_polymerase_alpha_chain_like_domain


id: CL:1665
description: Tetratricopeptide repeat, and SurA N-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1665_Tetratricopeptide_repeat,_and_SurA_N-terminal_domain


id: CL:1678
description: Mixed, incl. Regulation of catabolic process, and Regulation of sporulation
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1678_Mixed,_incl._Regulation_of_catabolic_process,_and_Regulation_of_sporulation


id: CL:1690
description: Mixed, incl. Pyridine nucleotide biosynthetic process, and Pantothenate and CoA biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1690_Mixed,_incl._Pyridine_nucleotide_biosynthetic_process,_and_Pantothenate_and_CoA_biosynthesis


id: CL:1691
description: Mixed, incl. Pyridine nucleotide biosynthetic process, and Pantothenate and CoA biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1691_Mixed,_incl._Pyridine_nucleotide_biosynthetic_process,_and_Pantothenate_and_CoA_biosynthesis


id: CL:1692
description: Mixed, incl. Pyridine nucleotide biosynthetic process, and Phosphatidylglycerol metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1692_Mixed,_incl._Pyridine_nucleotide_biosynthetic_process,_and_Phosphatidylglycerol_metabolic_process


id: CL:1695
description: Pyridine nucleotide biosynthetic process, and Phosphatidylglycerol metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1695_Pyridine_nucleotide_biosynthetic_process,_and_Phosphatidylglycerol_metabolic_process


id: CL:1696
description: Phosphatidylglycerol metabolic process, and Methylthiotransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1696_Phosphatidylglycerol_metabolic_process,_and_Methylthiotransferase


id: CL:1723
description: Mixed, incl. Pantothenate biosynthesis, and Quinolinate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1723_Mixed,_incl._Pantothenate_biosynthesis,_and_Quinolinate_metabolic_process


id: CL:1725
description: Mixed, incl. Quinolinate metabolic process, and Fumarate reductase flavoprotein C-term
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1725_Mixed,_incl._Quinolinate_metabolic_process,_and_Fumarate_reductase_flavoprotein_C-term


id: CL:1739
description: Pantothenate biosynthesis, and Coenzyme A biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1739_Pantothenate_biosynthesis,_and_Coenzyme_A_biosynthesis


id: CL:1750
description: Mixed, incl. PmbA/TldA metallopeptidase domain 1, and Coenzyme A biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1750_Mixed,_incl._PmbA/TldA_metallopeptidase_domain_1,_and_Coenzyme_A_biosynthesis


id: CL:1751
description: Mixed, incl. PmbA/TldA metallopeptidase domain 1, and NAD+ kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1751_Mixed,_incl._PmbA/TldA_metallopeptidase_domain_1,_and_NAD+_kinase_activity


id: CL:1753
description: Mixed, incl. NAD+ kinase activity, and Zinc finger, FPG/IleRS-type
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1753_Mixed,_incl._NAD+_kinase_activity,_and_Zinc_finger,_FPG/IleRS-type


id: CL:1774
description: Alditol metabolic process, and ATP-dependent DNA helicase RecG/Transcription-repair-coupling factor
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1774_Alditol_metabolic_process,_and_ATP-dependent_DNA_helicase_RecG/Transcription-repair-coupling_factor


id: CL:1795
description: Mixed, incl. Electron transport chain, and Pyruvate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1795_Mixed,_incl._Electron_transport_chain,_and_Pyruvate_metabolism


id: CL:1796
description: Mixed, incl. Pyruvate metabolism, and Branched-chain amino acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1796_Mixed,_incl._Pyruvate_metabolism,_and_Branched-chain_amino_acid_metabolic_process


id: CL:1797
description: Mixed, incl. Pyruvate metabolism, and Branched-chain amino acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1797_Mixed,_incl._Pyruvate_metabolism,_and_Branched-chain_amino_acid_metabolic_process


id: CL:1798
description: Mixed, incl. Pyruvate metabolism, and Branched-chain amino acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1798_Mixed,_incl._Pyruvate_metabolism,_and_Branched-chain_amino_acid_metabolic_process


id: CL:1799
description: Mixed, incl. Branched-chain amino acid metabolic process, and Citrate cycle (TCA cycle)
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1799_Mixed,_incl._Branched-chain_amino_acid_metabolic_process,_and_Citrate_cycle_(TCA_cycle)


id: CL:1800
description: Branched-chain amino acid metabolic process, and Citrate cycle (TCA cycle)
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1800_Branched-chain_amino_acid_metabolic_process,_and_Citrate_cycle_(TCA_cycle)


id: CL:1801
description: Branched-chain amino acid metabolic process, and Citrate cycle (TCA cycle)
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1801_Branched-chain_amino_acid_metabolic_process,_and_Citrate_cycle_(TCA_cycle)


id: CL:1804
description: Branched-chain amino acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1804_Branched-chain_amino_acid_metabolic_process


id: CL:1806
description: Branched-chain amino acid biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1806_Branched-chain_amino_acid_biosynthesis


id: CL:1861
description: Taurine and hypotaurine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1861_Taurine_and_hypotaurine_metabolism


id: CL:1876
description: Mixed, incl. FAD-linked oxidase, C-terminal, and LUD domain
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1876_Mixed,_incl._FAD-linked_oxidase,_C-terminal,_and_LUD_domain


id: CL:1878
description: LUD domain, and Vanillyl-alcohol oxidase, C-terminal subdomain 2
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1878_LUD_domain,_and_Vanillyl-alcohol_oxidase,_C-terminal_subdomain_2


id: CL:1903
description: Fatty acid metabolism, and Biotin-binding site
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1903_Fatty_acid_metabolism,_and_Biotin-binding_site


id: CL:1906
description: Fatty acid synthase activity, and Dioxygenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1906_Fatty_acid_synthase_activity,_and_Dioxygenase_activity


id: CL:1920
description: CoA carboxylase activity, and Biotin-binding site
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1920_CoA_carboxylase_activity,_and_Biotin-binding_site


id: CL:1940
description: Mixed, incl. Malic enzyme, conserved site, and Inosine triphosphate pyrophosphatase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1940_Mixed,_incl._Malic_enzyme,_conserved_site,_and_Inosine_triphosphate_pyrophosphatase-like


id: CL:1956
description: Mixed, incl. succinate-CoA ligase complex, and Purine catabolism PurC-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1956_Mixed,_incl._succinate-CoA_ligase_complex,_and_Purine_catabolism_PurC-like_domain


id: CL:1960
description: succinate-CoA ligase complex, and Putative cyclase
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1960_succinate-CoA_ligase_complex,_and_Putative_cyclase


id: CL:1975
description: Electron transport chain, and Ubiquinone
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1975_Electron_transport_chain,_and_Ubiquinone


id: CL:1976
description: Oxidative phosphorylation, and Band 7 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1976_Oxidative_phosphorylation,_and_Band_7_domain


id: CL:1977
description: Oxidative phosphorylation, and Domain of unknown function DUF362
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1977_Oxidative_phosphorylation,_and_Domain_of_unknown_function_DUF362


id: CL:1979
description: NADH dehydrogenase activity, and Thioredoxin-like [2Fe-2S] ferredoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1979_NADH_dehydrogenase_activity,_and_Thioredoxin-like_[2Fe-2S]_ferredoxin


id: CL:1981
description: Quinone binding, and Respirasome
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1981_Quinone_binding,_and_Respirasome


id: CL:1985
description: Quinone, and Proton-conducting membrane transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:1985_Quinone,_and_Proton-conducting_membrane_transporter


id: CL:199
description: Mixed, incl. Rotamase, and UBA-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:199_Mixed,_incl._Rotamase,_and_UBA-like_superfamily


id: CL:2020
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2020_Thioredoxin-like_[2Fe-2S]_ferredoxin,_and_NADH-ubiquinone_oxidoreductase-G_iron-sulfur_binding_region

description:
  Thioredoxin-like [2Fe-2S] ferredoxin, and NADH-ubiquinone oxidoreductase-G iron-sulfur binding region


id: CL:2022
description: Thioredoxin-like [2Fe-2S] ferredoxin, and Iron hydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2022_Thioredoxin-like_[2Fe-2S]_ferredoxin,_and_Iron_hydrogenase


id: CL:2024
description: Iron hydrogenase, subset, and Respirasome
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2024_Iron_hydrogenase,_subset,_and_Respirasome


id: CL:2059
description: Mixed, incl. DRTGG, and DNA polymerase alpha chain like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2059_Mixed,_incl._DRTGG,_and_DNA_polymerase_alpha_chain_like_domain


id: CL:2073
description: Band 7 domain, and Peptidase M16, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2073_Band_7_domain,_and_Peptidase_M16,_C-terminal


id: CL:2087
description: Ubiquinone, and Electron transport
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2087_Ubiquinone,_and_Electron_transport


id: CL:2116
description: Mixed, incl. Sulfur metabolism, and Multiheme cytochrome superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2116_Mixed,_incl._Sulfur_metabolism,_and_Multiheme_cytochrome_superfamily


id: CL:2117
description: Sulfur metabolism, and Sulfur relay system
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2117_Sulfur_metabolism,_and_Sulfur_relay_system


id: CL:2119
description: Sulfate assimilation, and Nitrite/sulphite reductase 4Fe-4S domain
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2119_Sulfate_assimilation,_and_Nitrite/sulphite_reductase_4Fe-4S_domain


id: CL:2136
description: Hydrogen sulfide metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2136_Hydrogen_sulfide_metabolic_process


id: CL:2151
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2151_Mixed,_incl._Nitrite_and_sulphite_reductase_4Fe-4S_domain_containing_protein,_and_Oxidoreductase_FAD-binding_domain

description:
  Mixed, incl. Nitrite and sulphite reductase 4Fe-4S domain containing protein, and Oxidoreductase FAD-binding domain


id: CL:2173
description: Sulfur relay system, and AMP-binding enzyme
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2173_Sulfur_relay_system,_and_AMP-binding_enzyme


id: CL:2178
description: Rhodanese-like domain, and ThiF/MoeB/HesA family
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2178_Rhodanese-like_domain,_and_ThiF/MoeB/HesA_family


id: CL:2188
description: Iron-sulfur cluster assembly, and RNA adenylyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2188_Iron-sulfur_cluster_assembly,_and_RNA_adenylyltransferase_activity


id: CL:2206
description: Putative TM nitroreductase, and AMP-binding enzyme
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2206_Putative_TM_nitroreductase,_and_AMP-binding_enzyme


id: CL:2219
description: Mixed, incl. Multiheme cytochrome superfamily, and Molydopterin dinucleotide binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2219_Mixed,_incl._Multiheme_cytochrome_superfamily,_and_Molydopterin_dinucleotide_binding_domain


id: CL:2221
description: Multiheme cytochrome superfamily, and Molydopterin dinucleotide binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2221_Multiheme_cytochrome_superfamily,_and_Molydopterin_dinucleotide_binding_domain


id: CL:2224
description: Multiheme cytochrome superfamily, and NHL repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2224_Multiheme_cytochrome_superfamily,_and_NHL_repeat


id: CL:2226
description: Tetrahaem cytochrome domain, and Formate dehydrogenase (NAD+) activity
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2226_Tetrahaem_cytochrome_domain,_and_Formate_dehydrogenase_(NAD+)_activity


id: CL:225
description: Ribosomal small subunit biogenesis, and Initiation factor
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:225_Ribosomal_small_subunit_biogenesis,_and_Initiation_factor


id: CL:2254
description: Molydopterin dinucleotide binding domain, and 4Fe-4S dicluster domain
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2254_Molydopterin_dinucleotide_binding_domain,_and_4Fe-4S_dicluster_domain


id: CL:2289
description: Mixed, incl. Lactate oxidation, and Alpha-helical ferredoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2289_Mixed,_incl._Lactate_oxidation,_and_Alpha-helical_ferredoxin


id: CL:2292
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2292_Mixed,_incl._Lactate_oxidation,_and_H(2):CoB-CoM_heterodisulfide,ferredoxin_reductase_subunit_A-like

description:
  Mixed, incl. Lactate oxidation, and H(2):CoB-CoM heterodisulfide,ferredoxin reductase subunit A-like


id: CL:2294
description: F420-non-reducing hydrogenase iron-sulfur subunit D, and Lactate oxidation
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2294_F420-non-reducing_hydrogenase_iron-sulfur_subunit_D,_and_Lactate_oxidation


id: CL:2308
description: Lactate oxidation, and Alpha-helical ferredoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2308_Lactate_oxidation,_and_Alpha-helical_ferredoxin


id: CL:2333
description: Mixed, incl. Protein FixC-like, and Organelle envelope
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2333_Mixed,_incl._Protein_FixC-like,_and_Organelle_envelope


id: CL:2335
description: Protein FixC-like, and Organelle envelope
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2335_Protein_FixC-like,_and_Organelle_envelope


id: CL:2357
description: Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2357_Alcohol_dehydrogenase,_iron-type/glycerol_dehydrogenase_GldA


id: CL:2369
description: Mixed, incl. Rubredoxin-like domain, and Peptidase M42, domain 2
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2369_Mixed,_incl._Rubredoxin-like_domain,_and_Peptidase_M42,_domain_2


id: CL:2370
description: Mixed, incl. Rubredoxin-like domain, and Cellular metal ion homeostasis
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2370_Mixed,_incl._Rubredoxin-like_domain,_and_Cellular_metal_ion_homeostasis


id: CL:2373
description: Rubredoxin-like domain, and Flavodoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2373_Rubredoxin-like_domain,_and_Flavodoxin


id: CL:2393
description: Mixed, incl. Peptidase M42, domain 2, and Cellular response to heat
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2393_Mixed,_incl._Peptidase_M42,_domain_2,_and_Cellular_response_to_heat


id: CL:2408
description: Mixed, incl. Tripeptidase activity, and Amine-lyase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2408_Mixed,_incl._Tripeptidase_activity,_and_Amine-lyase_activity


id: CL:2409
description: Mixed, incl. Tripeptidase activity, and DUF34/NIF3 superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2409_Mixed,_incl._Tripeptidase_activity,_and_DUF34/NIF3_superfamily


id: CL:2411
description: Mixed, incl. DUF34/NIF3 superfamily, and Zinc finger, DksA/TraR C4-type
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2411_Mixed,_incl._DUF34/NIF3_superfamily,_and_Zinc_finger,_DksA/TraR_C4-type


id: CL:2425
description: Mixed, incl. Tripeptidase activity, and ComB-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2425_Mixed,_incl._Tripeptidase_activity,_and_ComB-like_superfamily


id: CL:2439
description: Amine-lyase activity, and Aminotransferase, class I/classII
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2439_Amine-lyase_activity,_and_Aminotransferase,_class_I/classII


id: CL:2450
description: Mixed, incl. tRNA threonylcarbamoyladenosine modification, and Arc-type ribbon-helix-helix
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2450_Mixed,_incl._tRNA_threonylcarbamoyladenosine_modification,_and_Arc-type_ribbon-helix-helix


id: CL:2451
description: Mixed, incl. Arc-type ribbon-helix-helix, and Protein phosphopantetheinylation
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2451_Mixed,_incl._Arc-type_ribbon-helix-helix,_and_Protein_phosphopantetheinylation


id: CL:2465
description: tRNA threonylcarbamoyladenosine modification, and PDZ domain 6
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2465_tRNA_threonylcarbamoyladenosine_modification,_and_PDZ_domain_6


id: CL:2482
description: Mixed, incl. Vitamin biosynthetic process, and Ubiquinone and other terpenoid-quinone biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2482_Mixed,_incl._Vitamin_biosynthetic_process,_and_Ubiquinone_and_other_terpenoid-quinone_biosynthesis


id: CL:2483
description: Mixed, incl. Thiamine biosynthetic process, and Ubiquinone and other terpenoid-quinone biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2483_Mixed,_incl._Thiamine_biosynthetic_process,_and_Ubiquinone_and_other_terpenoid-quinone_biosynthesis


id: CL:2484
description: Mixed, incl. Thiamine biosynthetic process, and Biotin and thiamin synthesis-associated domain
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2484_Mixed,_incl._Thiamine_biosynthetic_process,_and_Biotin_and_thiamin_synthesis-associated_domain


id: CL:2485
description: Thiamine biosynthetic process, and Biotin and thiamin synthesis-associated domain
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2485_Thiamine_biosynthetic_process,_and_Biotin_and_thiamin_synthesis-associated_domain


id: CL:2487
description: Thiamine biosynthetic process, and ThiH/NocL/HydG-like
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2487_Thiamine_biosynthetic_process,_and_ThiH/NocL/HydG-like


id: CL:2489
description: ThiC/Bza, core domain, and Thiamine biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2489_ThiC/Bza,_core_domain,_and_Thiamine_biosynthetic_process


id: CL:2509
description: Biotin and thiamin synthesis-associated domain, and Cysteine desulfurase, SufS
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2509_Biotin_and_thiamin_synthesis-associated_domain,_and_Cysteine_desulfurase,_SufS


id: CL:2520
description: Menaquinone biosynthesis, and Ubiquinone metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2520_Menaquinone_biosynthesis,_and_Ubiquinone_metabolic_process


id: CL:2534
description: Mixed, incl. Biotin metabolic process, and Methyltransferase type 11
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2534_Mixed,_incl._Biotin_metabolic_process,_and_Methyltransferase_type_11


id: CL:2536
description: Biotin metabolic process, and Armadillo-like helical
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2536_Biotin_metabolic_process,_and_Armadillo-like_helical


id: CL:2557
description: Mixed, incl. YheO-like, and RidA family
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2557_Mixed,_incl._YheO-like,_and_RidA_family


id: CL:2577
description: Mixed, incl. Signal, and Liposaccharide metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2577_Mixed,_incl._Signal,_and_Liposaccharide_metabolic_process


id: CL:2578
description: Mixed, incl. Liposaccharide metabolic process, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2578_Mixed,_incl._Liposaccharide_metabolic_process,_and_Signal


id: CL:2579
description: Mixed, incl. Liposaccharide metabolic process, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2579_Mixed,_incl._Liposaccharide_metabolic_process,_and_Signal


id: CL:2580
description: Mixed, incl. Liposaccharide metabolic process, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2580_Mixed,_incl._Liposaccharide_metabolic_process,_and_Signal


id: CL:2581
description: Mixed, incl. Liposaccharide metabolic process, and Membrane organization
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2581_Mixed,_incl._Liposaccharide_metabolic_process,_and_Membrane_organization


id: CL:2583
description: Mixed, incl. Liposaccharide metabolic process, and Membrane organization
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2583_Mixed,_incl._Liposaccharide_metabolic_process,_and_Membrane_organization


id: CL:2585
description: Mixed, incl. Liposaccharide metabolic process, and Membrane organization
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2585_Mixed,_incl._Liposaccharide_metabolic_process,_and_Membrane_organization


id: CL:2587
description: Liposaccharide metabolic process, and Lipopolysaccharide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2587_Liposaccharide_metabolic_process,_and_Lipopolysaccharide_transport


id: CL:2588
description: Glycolipid metabolic process, and Lipopolysaccharide biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2588_Glycolipid_metabolic_process,_and_Lipopolysaccharide_biosynthesis


id: CL:2613
description: Lipopolysaccharide transport, and Permease LptG/LptF-related
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2613_Lipopolysaccharide_transport,_and_Permease_LptG/LptF-related


id: CL:2626
description: Mixed, incl. Membrane organization, and S-layer homology domain
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2626_Mixed,_incl._Membrane_organization,_and_S-layer_homology_domain


id: CL:2628
description: Protein insertion into membrane, and SpoIVB peptidase S55
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2628_Protein_insertion_into_membrane,_and_SpoIVB_peptidase_S55


id: CL:2650
description: Mixed, incl. TonB, C-terminal, and Cell outer membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2650_Mixed,_incl._TonB,_C-terminal,_and_Cell_outer_membrane


id: CL:2669
description: Mixed, incl. beta-Lactam resistance, and FtsX-like permease family
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2669_Mixed,_incl._beta-Lactam_resistance,_and_FtsX-like_permease_family


id: CL:2671
description: Mixed, incl. FtsX-like permease family, and ABC transporter, lipoprotein release, LolD-like
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2671_Mixed,_incl._FtsX-like_permease_family,_and_ABC_transporter,_lipoprotein_release,_LolD-like


id: CL:2688
description: Mixed, incl. Patched family, and RND efflux pump, membrane fusion protein
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2688_Mixed,_incl._Patched_family,_and_RND_efflux_pump,_membrane_fusion_protein


id: CL:2705
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2705_Mixed,_incl._Nitrogen_regulatory_protein_PII/ATP_phosphoribosyltransferase,_C-terminal,_and_Cell_wall_biogenesis/degradation

description:
  Mixed, incl. Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal, and Cell wall biogenesis/degradation


id: CL:2720
description: Mixed, incl. Sigma-70, region 4, and Peptidase M48
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2720_Mixed,_incl._Sigma-70,_region_4,_and_Peptidase_M48


id: CL:2722
description: Mixed, incl. Lysyltransferase activity, and Glycosyl transferase 4-like
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2722_Mixed,_incl._Lysyltransferase_activity,_and_Glycosyl_transferase_4-like


id: CL:2744
description: Mixed, incl. Domain of unknown function DUF1540, and NolW-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2744_Mixed,_incl._Domain_of_unknown_function_DUF1540,_and_NolW-like_superfamily


id: CL:275
description: Mixed, incl. RNA polymerase, and Chromatin remodeling
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:275_Mixed,_incl._RNA_polymerase,_and_Chromatin_remodeling


id: CL:2759
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2759_Mostly_uncharacterized,_incl._Lon_protease_(S16)_C-terminal_proteolytic_domain,_and_Lipid_degradation

description:
  Mostly uncharacterized, incl. Lon protease (S16) C-terminal proteolytic domain, and Lipid degradation


id: CL:2760
description: Mixed, incl. S1 domain, and SipL, SPOCS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2760_Mixed,_incl._S1_domain,_and_SipL,_SPOCS_domain


id: CL:2771
description: Mixed, incl. Lon protease (S16) C-terminal proteolytic domain, and Lipid degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2771_Mixed,_incl._Lon_protease_(S16)_C-terminal_proteolytic_domain,_and_Lipid_degradation


id: CL:2780
description: Mixed, incl. Cellular modified amino acid biosynthetic process, and MarR-type HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2780_Mixed,_incl._Cellular_modified_amino_acid_biosynthetic_process,_and_MarR-type_HTH_domain


id: CL:2781
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2781_Mixed,_incl._Cellular_modified_amino_acid_biosynthetic_process,_and_Ferrous_iron_transmembrane_transporter_activity

description:
  Mixed, incl. Cellular modified amino acid biosynthetic process, and Ferrous iron transmembrane transporter activity


id: CL:2782
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2782_Mixed,_incl._Pteridine-containing_compound_biosynthetic_process,_and_Ferrous_iron_transmembrane_transporter_activity

description:
  Mixed, incl. Pteridine-containing compound biosynthetic process, and Ferrous iron transmembrane transporter activity


id: CL:2783
description: Mixed, incl. Pteridine-containing compound biosynthetic process, and Nucleoside recognition
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2783_Mixed,_incl._Pteridine-containing_compound_biosynthetic_process,_and_Nucleoside_recognition


id: CL:2787
description: Pteridine-containing compound biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2787_Pteridine-containing_compound_biosynthetic_process


id: CL:2799
description: Nucleoside recognition, and Ferrous iron transporter FeoA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2799_Nucleoside_recognition,_and_Ferrous_iron_transporter_FeoA_domain


id: CL:280
description: RNA polymerase, and Helicase/UvrB, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:280_RNA_polymerase,_and_Helicase/UvrB,_N-terminal


id: CL:2810
description: Ferrous iron transmembrane transporter activity, and Ferrous iron transporter FeoA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2810_Ferrous_iron_transmembrane_transporter_activity,_and_Ferrous_iron_transporter_FeoA_domain


id: CL:2819
description: Mixed, incl. Queuosine biosynthesis, and Glutamate-cysteine ligase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2819_Mixed,_incl._Queuosine_biosynthesis,_and_Glutamate-cysteine_ligase_activity


id: CL:2820
description: Mixed, incl. PPC domain, and Domain of unknown function DUF1232
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2820_Mixed,_incl._PPC_domain,_and_Domain_of_unknown_function_DUF1232


id: CL:2829
description: Queuosine biosynthesis, and Glutamate-cysteine ligase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2829_Queuosine_biosynthesis,_and_Glutamate-cysteine_ligase_activity


id: CL:2838
description: Mixed, incl. MarR-type HTH domain, and Xenobiotic transport
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2838_Mixed,_incl._MarR-type_HTH_domain,_and_Xenobiotic_transport


id: CL:2840
description: Mixed, incl. MarR-type HTH domain, and Xenobiotic transport
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2840_Mixed,_incl._MarR-type_HTH_domain,_and_Xenobiotic_transport


id: CL:2842
description: MarR-type HTH domain, and Xenobiotic transport
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2842_MarR-type_HTH_domain,_and_Xenobiotic_transport


id: CL:2856
description: Mixed, incl. Uracil metabolic process, and UDP-N-acetylglucosamine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2856_Mixed,_incl._Uracil_metabolic_process,_and_UDP-N-acetylglucosamine_metabolic_process


id: CL:2872
description: Mixed, incl. Zinc/iron permease, and Protein of unknown function DUF1657
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2872_Mixed,_incl._Zinc/iron_permease,_and_Protein_of_unknown_function_DUF1657


id: CL:2887
description: Mixed, incl. ABC transporters, and Porphyrin and chlorophyll metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2887_Mixed,_incl._ABC_transporters,_and_Porphyrin_and_chlorophyll_metabolism


id: CL:2888
description: Mixed, incl. ABC transporters, and Folate biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2888_Mixed,_incl._ABC_transporters,_and_Folate_biosynthesis


id: CL:2889
description: ABC transporters, and MetI-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2889_ABC_transporters,_and_MetI-like_superfamily


id: CL:2890
description: Mixed, incl. MetI-like superfamily, and Polyamine transport
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2890_Mixed,_incl._MetI-like_superfamily,_and_Polyamine_transport


id: CL:2891
description: Mixed, incl. ABC-type polyamine transporter activity, and MetI-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2891_Mixed,_incl._ABC-type_polyamine_transporter_activity,_and_MetI-like_superfamily


id: CL:2894
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2894_Mixed,_incl._ABC-type_polyamine_transporter_activity,_and_Bacterial_extracellular_solute-binding_protein

description:
  Mixed, incl. ABC-type polyamine transporter activity, and Bacterial extracellular solute-binding protein


id: CL:2914
description: Sulfate transport, and Molybdate ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2914_Sulfate_transport,_and_Molybdate_ion_transport


id: CL:2930
description: Aliphatic sulfonates-binding protein, and Sulfur metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2930_Aliphatic_sulfonates-binding_protein,_and_Sulfur_metabolism


id: CL:2932
description: Aliphatic sulfonates-binding protein, and MetI-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2932_Aliphatic_sulfonates-binding_protein,_and_MetI-like_superfamily


id: CL:2952
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2952_Mixed,_incl._ABC_transporter-like,_ATP-binding_domain,_and_Nickel_cation_transmembrane_transporter_activity

description:
  Mixed, incl. ABC transporter-like, ATP-binding domain, and Nickel cation transmembrane transporter activity


id: CL:2953
description: Mixed, incl. Nickel cation transmembrane transporter activity, and Peptide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2953_Mixed,_incl._Nickel_cation_transmembrane_transporter_activity,_and_Peptide_transport


id: CL:2954
description: Nickel cation transmembrane transporter activity, and Peptide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2954_Nickel_cation_transmembrane_transporter_activity,_and_Peptide_transport


id: CL:2955
description: Nickel cation transmembrane transporter activity, and Peptide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2955_Nickel_cation_transmembrane_transporter_activity,_and_Peptide_transport


id: CL:2964
description: Nickel cation transmembrane transporter activity, and Peptide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2964_Nickel_cation_transmembrane_transporter_activity,_and_Peptide_transport


id: CL:2974
description: Mixed, incl. Type 1 protein exporter, and CAAX-box protein processing
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2974_Mixed,_incl._Type_1_protein_exporter,_and_CAAX-box_protein_processing


id: CL:2985
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:2985_Ligand-gated_channel_activity,_and_ABC-type_amino_acid_transport_system,_ATPase_component,_HisP-type

description:
  Ligand-gated channel activity, and ABC-type amino acid transport system, ATPase component, HisP-type


id: CL:3006
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3006_Mixed,_incl._Folate_biosynthesis,_and_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_NAD_or_NADP_as_acceptor

description:
  Mixed, incl. Folate biosynthesis, and Oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor


id: CL:3007
description: Mixed, incl. Molybdenum cofactor biosynthesis, and Molybdenum ion binding
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3007_Mixed,_incl._Molybdenum_cofactor_biosynthesis,_and_Molybdenum_ion_binding


id: CL:3008
description: Mixed, incl. Molybdenum cofactor biosynthesis, and NlpA lipoprotein
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3008_Mixed,_incl._Molybdenum_cofactor_biosynthesis,_and_NlpA_lipoprotein


id: CL:3010
description: Molybdenum cofactor biosynthesis, and Toxin catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3010_Molybdenum_cofactor_biosynthesis,_and_Toxin_catabolic_process


id: CL:3012
description: Molybdenum cofactor biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3012_Molybdenum_cofactor_biosynthesis


id: CL:3036
description: Mixed, incl. NlpA lipoprotein, and Amino-acid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3036_Mixed,_incl._NlpA_lipoprotein,_and_Amino-acid_transport


id: CL:305
description: Aminoacyl-tRNA synthetase, and glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:305_Aminoacyl-tRNA_synthetase,_and_glutaminyl-tRNA_synthase_(glutamine-hydrolyzing)_activity


id: CL:3051
description: Mixed, incl. Bacterial extracellular solute-binding protein, and Molybdate ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3051_Mixed,_incl._Bacterial_extracellular_solute-binding_protein,_and_Molybdate_ion_transport


id: CL:3064
description: Alkaloid metabolic process, and Hypoxanthine catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3064_Alkaloid_metabolic_process,_and_Hypoxanthine_catabolic_process


id: CL:3065
description: Alkaloid metabolic process, and 5-methylthioadenosine deaminase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3065_Alkaloid_metabolic_process,_and_5-methylthioadenosine_deaminase_activity


id: CL:3067
description: [2Fe-2S]-binding, and Alkaloid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3067_[2Fe-2S]-binding,_and_Alkaloid_metabolic_process


id: CL:3088
description: Hypoxanthine catabolic process, and Molybdopterin molybdotransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3088_Hypoxanthine_catabolic_process,_and_Molybdopterin_molybdotransferase_activity


id: CL:309
description: Aminoacyl-tRNA synthetase, class Ia, anticodon-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:309_Aminoacyl-tRNA_synthetase,_class_Ia,_anticodon-binding


id: CL:3097
description: Mixed, incl. Tetrapyrrole metabolic process, and ABC transporter, CbiO/EcfA subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3097_Mixed,_incl._Tetrapyrrole_metabolic_process,_and_ABC_transporter,_CbiO/EcfA_subunit


id: CL:3098
description: Mixed, incl. Tetrapyrrole metabolic process, and ABC transporter, CbiO/EcfA subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3098_Mixed,_incl._Tetrapyrrole_metabolic_process,_and_ABC_transporter,_CbiO/EcfA_subunit


id: CL:3099
description: Tetrapyrrole metabolic process, and ABC transporter, CbiO/EcfA subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3099_Tetrapyrrole_metabolic_process,_and_ABC_transporter,_CbiO/EcfA_subunit


id: CL:3100
description: Porphyrin and chlorophyll metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3100_Porphyrin_and_chlorophyll_metabolism


id: CL:3101
description: Cobalamin metabolic process, and Siroheme metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3101_Cobalamin_metabolic_process,_and_Siroheme_metabolic_process


id: CL:3105
description: Tetrapyrrole methylase, subdomain 2, and Met-10+ like-protein
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3105_Tetrapyrrole_methylase,_subdomain_2,_and_Met-10+_like-protein


id: CL:3127
description: Mixed, incl. Cobalamin transport, and Guanylyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3127_Mixed,_incl._Cobalamin_transport,_and_Guanylyltransferase_activity


id: CL:3145
description: Porphyrin biosynthesis, and AsnC-type HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3145_Porphyrin_biosynthesis,_and_AsnC-type_HTH_domain


id: CL:3165
description: Mixed, incl. Cobalt ion transport, and ABC transporter, CbiO/EcfA subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3165_Mixed,_incl._Cobalt_ion_transport,_and_ABC_transporter,_CbiO/EcfA_subunit


id: CL:3167
description: ABC transporter, CbiO/EcfA subunit, and Amide transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3167_ABC_transporter,_CbiO/EcfA_subunit,_and_Amide_transmembrane_transporter_activity


id: CL:3192
description: Mixed, incl. Peroxidase, and Phosphate transport system permease protein 1
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3192_Mixed,_incl._Peroxidase,_and_Phosphate_transport_system_permease_protein_1


id: CL:320
description: Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm, and tRNA synthetases class I (W and Y)
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:320_Class_I_and_II_aminoacyl-tRNA_synthetase,_tRNA-binding_arm,_and_tRNA_synthetases_class_I_(W_and_Y)


id: CL:3201
description: Mostly uncharacterized, incl. ATPase complex, and rRNA (adenine) methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3201_Mostly_uncharacterized,_incl._ATPase_complex,_and_rRNA_(adenine)_methyltransferase_activity


id: CL:3203
description: Mixed, incl. ATPase complex, and rRNA (adenine) methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3203_Mixed,_incl._ATPase_complex,_and_rRNA_(adenine)_methyltransferase_activity


id: CL:3235
description: Signal transduction, and GGDEF domain
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3235_Signal_transduction,_and_GGDEF_domain


id: CL:3236
description: Signal transduction, and GGDEF domain
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3236_Signal_transduction,_and_GGDEF_domain


id: CL:3238
description: Bacterial chemotaxis, and GGDEF domain
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3238_Bacterial_chemotaxis,_and_GGDEF_domain


id: CL:3243
description: Bacterial chemotaxis, and GGDEF domain
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3243_Bacterial_chemotaxis,_and_GGDEF_domain


id: CL:3248
description: Bacterial chemotaxis, and GGDEF domain
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3248_Bacterial_chemotaxis,_and_GGDEF_domain


id: CL:3249
description: Taxis, and MCP methyltransferase, CheR-type
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3249_Taxis,_and_MCP_methyltransferase,_CheR-type


id: CL:3251
description: Taxis, and MCP methyltransferase, CheR-type
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3251_Taxis,_and_MCP_methyltransferase,_CheR-type


id: CL:3256
description: CheW-like domain, and Chemotaxis methyl-accepting receptor
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3256_CheW-like_domain,_and_Chemotaxis_methyl-accepting_receptor


id: CL:3258
description: CheW-like domain, and MCP methyltransferase, CheR-type
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3258_CheW-like_domain,_and_MCP_methyltransferase,_CheR-type


id: CL:3281
description: CheW-like domain, and CheD-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3281_CheW-like_domain,_and_CheD-like_superfamily


id: CL:3309
description: EAL domain, and Diguanylate cyclase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3309_EAL_domain,_and_Diguanylate_cyclase_activity


id: CL:331
description: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity, and Histidine-tRNA ligase
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:331_glutaminyl-tRNA_synthase_(glutamine-hydrolyzing)_activity,_and_Histidine-tRNA_ligase


id: CL:3350
description: His Kinase A (phosphoacceptor) domain, and DNA binding HTH domain, AraC-type
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3350_His_Kinase_A_(phosphoacceptor)_domain,_and_DNA_binding_HTH_domain,_AraC-type


id: CL:3354
description: His Kinase A (phosphoacceptor) domain, and OmpR/PhoB-type DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3354_His_Kinase_A_(phosphoacceptor)_domain,_and_OmpR/PhoB-type_DNA-binding_domain


id: CL:3356
description: Two-component regulatory system, and PAS fold-4
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3356_Two-component_regulatory_system,_and_PAS_fold-4


id: CL:3388
description: Histidine kinase, and Helix_turn_helix, Lux Regulon
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3388_Histidine_kinase,_and_Helix_turn_helix,_Lux_Regulon


id: CL:340
description: RNA degradation, and GTP binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:340_RNA_degradation,_and_GTP_binding_domain


id: CL:3403
description: Cilium, and Bacterial-type flagellum organization
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3403_Cilium,_and_Bacterial-type_flagellum_organization


id: CL:3410
description: Bacterial-type flagellum-dependent cell motility
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3410_Bacterial-type_flagellum-dependent_cell_motility


id: CL:3411
description: Cytoskeletal motor activity, and Flagellar basal body rod protein, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3411_Cytoskeletal_motor_activity,_and_Flagellar_basal_body_rod_protein,_conserved_site


id: CL:3413
description: Flagellar basal body rod protein, conserved site, and Cytoskeletal motor activity
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3413_Flagellar_basal_body_rod_protein,_conserved_site,_and_Cytoskeletal_motor_activity


id: CL:342
description: Mixed, incl. PNPase/RNase PH domain superfamily, and DbpA RNA binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:342_Mixed,_incl._PNPase/RNase_PH_domain_superfamily,_and_DbpA_RNA_binding_domain


id: CL:3430
description: Cytoskeletal motor activity, and MgtE, N-terminal domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3430_Cytoskeletal_motor_activity,_and_MgtE,_N-terminal_domain_superfamily


id: CL:3440
description: Bacterial-type flagellum assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3440_Bacterial-type_flagellum_assembly


id: CL:3453
description: Bacterial-type flagellum basal body, rod
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3453_Bacterial-type_flagellum_basal_body,_rod


id: CL:3465
description: Secreted, and MotA/TolQ/ExbB proton channel
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3465_Secreted,_and_MotA/TolQ/ExbB_proton_channel


id: CL:3482
description: Mixed, incl. PilZ domain, and ATP binding protein MinD/FleN
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3482_Mixed,_incl._PilZ_domain,_and_ATP_binding_protein_MinD/FleN


id: CL:3513
description: Sigma-54 interaction domain, ATP-binding site 2
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3513_Sigma-54_interaction_domain,_ATP-binding_site_2


id: CL:3527
description: HD-GYP domain, and Diguanylate cyclase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3527_HD-GYP_domain,_and_Diguanylate_cyclase_activity


id: CL:3540
description: Mixed, incl. Regulation of cell death, and Type II secretion system (T2SS), protein F
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3540_Mixed,_incl._Regulation_of_cell_death,_and_Type_II_secretion_system_(T2SS),_protein_F


id: CL:3544
description: Mixed, incl. Type II secretion system (T2SS), protein F, and Type II/IV secretion system protein
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3544_Mixed,_incl._Type_II_secretion_system_(T2SS),_protein_F,_and_Type_II/IV_secretion_system_protein


id: CL:3568
description: Mixed, incl. E1-E2 ATPase, and Crp-type HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3568_Mixed,_incl._E1-E2_ATPase,_and_Crp-type_HTH_domain


id: CL:3569
description: Mixed, incl. E1-E2 ATPase, and Crp-type HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3569_Mixed,_incl._E1-E2_ATPase,_and_Crp-type_HTH_domain


id: CL:357
description: Mixed, incl. rRNA pseudouridine synthesis, and Negative regulation of translation
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:357_Mixed,_incl._rRNA_pseudouridine_synthesis,_and_Negative_regulation_of_translation


id: CL:3570
description: Mixed, incl. E1-E2 ATPase, and Copper ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3570_Mixed,_incl._E1-E2_ATPase,_and_Copper_ion_transport


id: CL:3572
description: Copper ion binding, and Metal-sensitive transcriptional repressor
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3572_Copper_ion_binding,_and_Metal-sensitive_transcriptional_repressor


id: CL:3594
description: Crp-type HTH domain, and Aquaporin-like
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3594_Crp-type_HTH_domain,_and_Aquaporin-like


id: CL:3615
description: Mixed, incl. MerR-type HTH domain, and Coenzyme F420 binding
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3615_Mixed,_incl._MerR-type_HTH_domain,_and_Coenzyme_F420_binding


id: CL:3631
description: Mixed, incl. Protein serine/threonine kinase activity, and SMAD/FHA domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3631_Mixed,_incl._Protein_serine/threonine_kinase_activity,_and_SMAD/FHA_domain_superfamily


id: CL:3633
description: Mixed, incl. SMAD/FHA domain superfamily, and Protein kinase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3633_Mixed,_incl._SMAD/FHA_domain_superfamily,_and_Protein_kinase_domain


id: CL:3635
description: Protein kinase domain, and Protein dephosphorylation
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3635_Protein_kinase_domain,_and_Protein_dephosphorylation


id: CL:3647
description: Mixed, incl. Phage tail baseplate hub (GPD)
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3647_Mixed,_incl._Phage_tail_baseplate_hub_(GPD)


id: CL:3668
description: Mixed, incl. Cache domain, and Cold shock, CspA
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3668_Mixed,_incl._Cache_domain,_and_Cold_shock,_CspA


id: CL:367
description: Mixed, incl. Protein folding, and Serine-type endopeptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:367_Mixed,_incl._Protein_folding,_and_Serine-type_endopeptidase_activity


id: CL:3677
description: Mixed, incl. PilZ domain, and MnmG, N-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3677_Mixed,_incl._PilZ_domain,_and_MnmG,_N-terminal_domain


id: CL:368
description: Mixed, incl. Protein folding, and Thioredoxin domain
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:368_Mixed,_incl._Protein_folding,_and_Thioredoxin_domain


id: CL:369
description: Protein folding, and Protein catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:369_Protein_folding,_and_Protein_catabolic_process


id: CL:3690
description: Mixed, incl. Pilus organization, and Protein secretion
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3690_Mixed,_incl._Pilus_organization,_and_Protein_secretion


id: CL:3692
description: Mixed, incl. Pilus organization, and Protein transport across the cell outer membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3692_Mixed,_incl._Pilus_organization,_and_Protein_transport_across_the_cell_outer_membrane


id: CL:3693
description: Mixed, incl. Pilus organization, and Protein transport across the cell outer membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3693_Mixed,_incl._Pilus_organization,_and_Protein_transport_across_the_cell_outer_membrane


id: CL:3694
description: Type II/IV secretion system protein, and Pilin-like
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3694_Type_II/IV_secretion_system_protein,_and_Pilin-like


id: CL:3703
description: Pilus assembly, and NolW-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3703_Pilus_assembly,_and_NolW-like_superfamily


id: CL:3713
description: Prokaryotic N-terminal methylation site, and O-Antigen ligase
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3713_Prokaryotic_N-terminal_methylation_site,_and_O-Antigen_ligase


id: CL:3724
description: Mixed, incl. Horizontal gene transfer, and DNA replication initiation
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3724_Mixed,_incl._Horizontal_gene_transfer,_and_DNA_replication_initiation


id: CL:3742
description: Mixed, incl. NHL repeat, and tRNA 3-end processing
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3742_Mixed,_incl._NHL_repeat,_and_tRNA_3-end_processing


id: CL:3756
description: Mostly uncharacterized, incl. SpoOB, alpha-helical domain, and Receptor
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3756_Mostly_uncharacterized,_incl._SpoOB,_alpha-helical_domain,_and_Receptor


id: CL:3757
description: Mixed, incl. SpoOB, alpha-helical domain, and Bordetella uptake gene
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3757_Mixed,_incl._SpoOB,_alpha-helical_domain,_and_Bordetella_uptake_gene


id: CL:3758
description: Mixed, incl. Bordetella uptake gene, and Protein of unknown function DUF1468
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3758_Mixed,_incl._Bordetella_uptake_gene,_and_Protein_of_unknown_function_DUF1468


id: CL:3760
description: Mixed, incl. Bordetella uptake gene, and Conserved carboxylase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3760_Mixed,_incl._Bordetella_uptake_gene,_and_Conserved_carboxylase_domain


id: CL:3779
description: Mixed, incl. Bordetella uptake gene, and Cellular amide catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3779_Mixed,_incl._Bordetella_uptake_gene,_and_Cellular_amide_catabolic_process


id: CL:3791
description: Mixed, incl. Quorum sensing, and Pfam phage integrase family
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3791_Mixed,_incl._Quorum_sensing,_and_Pfam_phage_integrase_family


id: CL:3803
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3803_Mixed,_incl._TRAP_C4-dicarboxylate_transport_system_permease_DctM_subunit,_and_C4-dicarboxylate_transport

description:
  Mixed, incl. TRAP C4-dicarboxylate transport system permease DctM subunit, and C4-dicarboxylate transport


id: CL:3823
description: Mixed, incl. Cell differentiation, and Transmembrane helix
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3823_Mixed,_incl._Cell_differentiation,_and_Transmembrane_helix


id: CL:3824
description: Mixed, incl. Cell differentiation, and Transmembrane helix
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3824_Mixed,_incl._Cell_differentiation,_and_Transmembrane_helix


id: CL:3825
description: Cell differentiation, and Transmembrane helix
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3825_Cell_differentiation,_and_Transmembrane_helix


id: CL:3826
description: Mixed, incl. Cell differentiation, and Protein of unknown function DUF421
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3826_Mixed,_incl._Cell_differentiation,_and_Protein_of_unknown_function_DUF421


id: CL:3827
description: Cell differentiation, and Protein of unknown function DUF421
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3827_Cell_differentiation,_and_Protein_of_unknown_function_DUF421


id: CL:3828
description: Cell differentiation, and Protein of unknown function DUF421
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3828_Cell_differentiation,_and_Protein_of_unknown_function_DUF421


id: CL:3829
description: Cell differentiation, and Protein of unknown function DUF421
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3829_Cell_differentiation,_and_Protein_of_unknown_function_DUF421


id: CL:3831
description: Cell differentiation, and Virion
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3831_Cell_differentiation,_and_Virion


id: CL:3841
description: Mixed, incl. Sporulation, and RNA polymerase sigma-70 region 4
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3841_Mixed,_incl._Sporulation,_and_RNA_polymerase_sigma-70_region_4


id: CL:3843
description: Mixed, incl. Sporulation, and RNA polymerase sigma-70 region 4
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3843_Mixed,_incl._Sporulation,_and_RNA_polymerase_sigma-70_region_4


id: CL:3844
description: Mixed, incl. Aspartyl protease, and Sporulation protein YlmC/YmxH
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3844_Mixed,_incl._Aspartyl_protease,_and_Sporulation_protein_YlmC/YmxH


id: CL:3853
description: Mixed, incl. Zymogen, and Activator
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3853_Mixed,_incl._Zymogen,_and_Activator


id: CL:3873
description: Stage III sporulation protein AC/AD family, and Sporulation
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3873_Stage_III_sporulation_protein_AC/AD_family,_and_Sporulation


id: CL:3875
description: Stage III sporulation protein AC/AD family, and Sporulation
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3875_Stage_III_sporulation_protein_AC/AD_family,_and_Sporulation


id: CL:3912
description: Spore germination, and Peptidase HybD-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3912_Spore_germination,_and_Peptidase_HybD-like_domain_superfamily


id: CL:3914
description: Spore germination GerAB, and Spore germination GerAC-like
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3914_Spore_germination_GerAB,_and_Spore_germination_GerAC-like


id: CL:3935
description: Mixed, incl. Spore germination GerAC-like, and Metal-sensitive transcriptional repressor
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3935_Mixed,_incl._Spore_germination_GerAC-like,_and_Metal-sensitive_transcriptional_repressor


id: CL:3955
description: Mixed, incl. Virion, and Protein of unknown function DUF421
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3955_Mixed,_incl._Virion,_and_Protein_of_unknown_function_DUF421


id: CL:3972
description: Mixed, incl. Endospore-forming forespore, and MatE
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3972_Mixed,_incl._Endospore-forming_forespore,_and_MatE


id: CL:3987
description: Mixed, incl. ATPase complex, and Ligase activity, forming nitrogen-metal bonds
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:3987_Mixed,_incl._ATPase_complex,_and_Ligase_activity,_forming_nitrogen-metal_bonds


id: CL:4002
description: Mixed, incl. YIEGIA protein, and Spore germination GerAB
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4002_Mixed,_incl._YIEGIA_protein,_and_Spore_germination_GerAB


id: CL:4015
description: Mostly uncharacterized, incl. ComB-like superfamily, and Immunoglobulin-like fold
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4015_Mostly_uncharacterized,_incl._ComB-like_superfamily,_and_Immunoglobulin-like_fold


id: CL:4017
description: Mixed, incl. Protein of unknown function DUF1657, and MFS transporter superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4017_Mixed,_incl._Protein_of_unknown_function_DUF1657,_and_MFS_transporter_superfamily


id: CL:4035
description: Mixed, incl. Immunoglobulin-like fold, and Flavoprotein
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4035_Mixed,_incl._Immunoglobulin-like_fold,_and_Flavoprotein


id: CL:4049
description: Mostly uncharacterized, incl. Phospholipid metabolism, and Protein of unknown function DUF3189
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4049_Mostly_uncharacterized,_incl._Phospholipid_metabolism,_and_Protein_of_unknown_function_DUF3189


id: CL:4050
description: Mixed, incl. Phospholipid metabolism, and Protein of unknown function DUF3189
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4050_Mixed,_incl._Phospholipid_metabolism,_and_Protein_of_unknown_function_DUF3189


id: CL:4051
description: Mixed, incl. Phospholipid metabolism, and Protein of unknown function DUF3189
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4051_Mixed,_incl._Phospholipid_metabolism,_and_Protein_of_unknown_function_DUF3189


id: CL:4052
description: Mixed, incl. Protein of unknown function DUF3189, and Phospholipid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4052_Mixed,_incl._Protein_of_unknown_function_DUF3189,_and_Phospholipid_metabolism


id: CL:4054
description: Mixed, incl. Protein of unknown function DUF3189, and YIEGIA protein
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4054_Mixed,_incl._Protein_of_unknown_function_DUF3189,_and_YIEGIA_protein


id: CL:406
description: Thioredoxin domain, and Thioredoxin-like fold
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:406_Thioredoxin_domain,_and_Thioredoxin-like_fold


id: CL:4073
description: Mixed, incl. GAF domain, and Response to starvation
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4073_Mixed,_incl._GAF_domain,_and_Response_to_starvation


id: CL:4084
description: Mixed, incl. Thiamine diphosphokinase activity, and Pore complex
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4084_Mixed,_incl._Thiamine_diphosphokinase_activity,_and_Pore_complex


id: CL:4099
description: Mixed, incl. Alkaline shock protein Asp23, and Peptidase M41
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4099_Mixed,_incl._Alkaline_shock_protein_Asp23,_and_Peptidase_M41


id: CL:4101
description: Mixed, incl. Peptidase M41, and SASP, alpha/beta-type superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4101_Mixed,_incl._Peptidase_M41,_and_SASP,_alpha/beta-type_superfamily


id: CL:4116
description: Mixed, incl. Polysaccharide biosynthesis protein, and MobA-like NTP transferase
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4116_Mixed,_incl._Polysaccharide_biosynthesis_protein,_and_MobA-like_NTP_transferase


id: CL:4128
description: Mixed, incl. SipL, SPOCS domain, and Lysin motif
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4128_Mixed,_incl._SipL,_SPOCS_domain,_and_Lysin_motif


id: CL:4129
description: Mixed, incl. SipL, SPOCS domain, and Lysin motif
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4129_Mixed,_incl._SipL,_SPOCS_domain,_and_Lysin_motif


id: CL:4131
description: Mixed, incl. SipL, SPOCS domain, and CAP domain
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4131_Mixed,_incl._SipL,_SPOCS_domain,_and_CAP_domain


id: CL:4132
description: Mixed, incl. SipL, SPOCS domain, and CAP domain
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4132_Mixed,_incl._SipL,_SPOCS_domain,_and_CAP_domain


id: CL:4134
description: CAP domain, and SipL, SPOCS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4134_CAP_domain,_and_SipL,_SPOCS_domain


id: CL:4172
description: Mixed, incl. Photosynthesis, and Peptidase S1, PA clan, chymotrypsin-like fold
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4172_Mixed,_incl._Photosynthesis,_and_Peptidase_S1,_PA_clan,_chymotrypsin-like_fold


id: CL:4183
description: Mixed, incl. Na+/Pi-cotransporter, and ABC transporter, permease
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4183_Mixed,_incl._Na+/Pi-cotransporter,_and_ABC_transporter,_permease


id: CL:4185
description: ABC transporter, permease, and UbiC transcription regulator-associated
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4185_ABC_transporter,_permease,_and_UbiC_transcription_regulator-associated


id: CL:419
description: Mixed, incl. MPN domain, and Peptidase S1C
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:419_Mixed,_incl._MPN_domain,_and_Peptidase_S1C


id: CL:4195
description: Na+/Pi-cotransporter, and Clp protease proteolytic subunit /Translocation-enhancing protein TepA
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4195_Na+/Pi-cotransporter,_and_Clp_protease_proteolytic_subunit_/Translocation-enhancing_protein_TepA


id: CL:4204
description: Mixed, incl. CoA enzyme activase, and FldB/FldC dehydratase alpha/beta subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4204_Mixed,_incl._CoA_enzyme_activase,_and_FldB/FldC_dehydratase_alpha/beta_subunit


id: CL:4207
description: Mixed, incl. CoA enzyme activase, and FldB/FldC dehydratase alpha/beta subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4207_Mixed,_incl._CoA_enzyme_activase,_and_FldB/FldC_dehydratase_alpha/beta_subunit


id: CL:4210
description: CoA enzyme activase uncharacterised domain (DUF2229), and CoA enzyme activase
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4210_CoA_enzyme_activase_uncharacterised_domain_(DUF2229),_and_CoA_enzyme_activase


id: CL:4228
description: Mixed, incl. Cytochrome c-like domain, and De novo CTP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4228_Mixed,_incl._Cytochrome_c-like_domain,_and_De_novo_CTP_biosynthetic_process


id: CL:4247
description: Mixed, incl. Amidohydrolase 3, and Septation
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4247_Mixed,_incl._Amidohydrolase_3,_and_Septation


id: CL:4258
description: Mostly uncharacterized, incl. Peptidase U32, and O-methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4258_Mostly_uncharacterized,_incl._Peptidase_U32,_and_O-methyltransferase_activity


id: CL:4260
description: Mixed, incl. Peptidase U32, and O-methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4260_Mixed,_incl._Peptidase_U32,_and_O-methyltransferase_activity


id: CL:4286
description: Mixed, incl. DNA helicase activity, and C4-dicarboxylate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4286_Mixed,_incl._DNA_helicase_activity,_and_C4-dicarboxylate_transport


id: CL:4288
description: Mixed, incl. UvrD-like helicase C-terminal domain, and UvrD/REP helicase N-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4288_Mixed,_incl._UvrD-like_helicase_C-terminal_domain,_and_UvrD/REP_helicase_N-terminal_domain


id: CL:4316
description: Mostly uncharacterized, incl. Amidohydrolase, and Ribosomal large subunit assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4316_Mostly_uncharacterized,_incl._Amidohydrolase,_and_Ribosomal_large_subunit_assembly


id: CL:4317
description: Mixed, incl. Amidohydrolase, and HTH ArsR-type DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4317_Mixed,_incl._Amidohydrolase,_and_HTH_ArsR-type_DNA-binding_domain


id: CL:4319
description: HTH ArsR-type DNA-binding domain, and Methyltransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4319_HTH_ArsR-type_DNA-binding_domain,_and_Methyltransferase_domain


id: CL:4332
description: Amidohydrolase, and Met-10+ like-protein
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4332_Amidohydrolase,_and_Met-10+_like-protein


id: CL:4343
description: Mixed, incl. Ribosomal large subunit assembly, and UspA
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4343_Mixed,_incl._Ribosomal_large_subunit_assembly,_and_UspA


id: CL:4359
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4359_Mixed,_incl._Oxidoreductase_activity,_acting_on_X-H_and_Y-H_to_form_an_X-Y_bond,_with_a_disulfide_as_acceptor,_and_Selenium

description:
  Mixed, incl. Oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with a disulfide as acceptor, and Selenium


id: CL:4360
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4360_Mixed,_incl._Oxidoreductase_activity,_acting_on_X-H_and_Y-H_to_form_an_X-Y_bond,_with_a_disulfide_as_acceptor,_and_Selenium

description:
  Mixed, incl. Oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with a disulfide as acceptor, and Selenium


id: CL:4362
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4362_Mixed,_incl._Oxidoreductase_activity,_acting_on_X-H_and_Y-H_to_form_an_X-Y_bond,_with_a_disulfide_as_acceptor,_and_Thioredoxin

description:
  Mixed, incl. Oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with a disulfide as acceptor, and Thioredoxin


id: CL:4365
description: Oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with a disulfide as acceptor
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4365_Oxidoreductase_activity,_acting_on_X-H_and_Y-H_to_form_an_X-Y_bond,_with_a_disulfide_as_acceptor


id: CL:4391
description: Mixed, incl. DNA methylase, and LysR, substrate-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4391_Mixed,_incl._DNA_methylase,_and_LysR,_substrate-binding


id: CL:4400
description: Mostly uncharacterized, incl. Flavoprotein-like superfamily, and Monocarboxylic acid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4400_Mostly_uncharacterized,_incl._Flavoprotein-like_superfamily,_and_Monocarboxylic_acid_transport


id: CL:4402
description: Mixed, incl. Flavoprotein-like superfamily, and Response to osmotic stress
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4402_Mixed,_incl._Flavoprotein-like_superfamily,_and_Response_to_osmotic_stress


id: CL:4403
description: Mixed, incl. Flavin reductase like domain, and Domain of unknown function (DUF362)
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4403_Mixed,_incl._Flavin_reductase_like_domain,_and_Domain_of_unknown_function_(DUF362)


id: CL:4405
description: Mixed, incl. SpoU rRNA Methylase family, and Phosphorylase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4405_Mixed,_incl._SpoU_rRNA_Methylase_family,_and_Phosphorylase_superfamily


id: CL:4424
description: Flavoprotein-like superfamily, and Response to osmotic stress
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4424_Flavoprotein-like_superfamily,_and_Response_to_osmotic_stress


id: CL:443
description: Mixed, incl. DNA replication, and DNA repair complex
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:443_Mixed,_incl._DNA_replication,_and_DNA_repair_complex


id: CL:444
description: Mixed, incl. DNA replication, and DNA repair complex
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:444_Mixed,_incl._DNA_replication,_and_DNA_repair_complex


id: CL:4442
description: Mixed, incl. Monocarboxylic acid transport, and NADPH regeneration
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4442_Mixed,_incl._Monocarboxylic_acid_transport,_and_NADPH_regeneration


id: CL:4443
description: Mixed, incl. Gluconate transporter, and NADPH regeneration
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4443_Mixed,_incl._Gluconate_transporter,_and_NADPH_regeneration


id: CL:4445
description: Gluconate transporter, and MafB19-like deaminase
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4445_Gluconate_transporter,_and_MafB19-like_deaminase


id: CL:445
description: DNA replication, and DNA repair complex
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:445_DNA_replication,_and_DNA_repair_complex


id: CL:4457
description: NADPH regeneration, and Ferric iron binding
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4457_NADPH_regeneration,_and_Ferric_iron_binding


id: CL:4467
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4467_Pentose_and_glucuronate_interconversions,_and_Secondary_active_monocarboxylate_transmembrane_transporter_activity

description:
  Pentose and glucuronate interconversions, and Secondary active monocarboxylate transmembrane transporter activity


id: CL:447
description: DNA replication, and Nucleotide-excision repair
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:447_DNA_replication,_and_Nucleotide-excision_repair


id: CL:4477
description: Mixed, incl. Vitamin binding, and Hydrocarbon metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4477_Mixed,_incl._Vitamin_binding,_and_Hydrocarbon_metabolic_process


id: CL:4478
description: Mixed, incl. Methanogenesis, and Methionine synthase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4478_Mixed,_incl._Methanogenesis,_and_Methionine_synthase_activity


id: CL:448
description: Nucleotide-excision repair, and DNA-directed DNA polymerase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:448_Nucleotide-excision_repair,_and_DNA-directed_DNA_polymerase_activity


id: CL:4480
description: Mixed, incl. Methanogenesis, and Methionine synthase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4480_Mixed,_incl._Methanogenesis,_and_Methionine_synthase_activity


id: CL:4481
description: Mixed, incl. Methanogenesis, and Methionine synthase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4481_Mixed,_incl._Methanogenesis,_and_Methionine_synthase_activity


id: CL:4483
description: Methanogenesis, and Pterin-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4483_Methanogenesis,_and_Pterin-binding_domain


id: CL:4485
description: B12 binding domain, and Pterin-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4485_B12_binding_domain,_and_Pterin-binding_domain


id: CL:450
description: DNA-directed DNA polymerase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:450_DNA-directed_DNA_polymerase_activity


id: CL:4502
description: MttB-like superfamily, and Methyltransferase cognate corrinoid protein
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4502_MttB-like_superfamily,_and_Methyltransferase_cognate_corrinoid_protein


id: CL:4523
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4523_Mixed,_incl._Prismane-like_superfamily,_and_Nickel_insertion_ATPase/GTPase_(CO_dehydrogenase_maturation_factor),_CooC_type

description:
  Mixed, incl. Prismane-like superfamily, and Nickel insertion ATPase/GTPase (CO dehydrogenase maturation factor), CooC type


id: CL:4525
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4525_Mixed,_incl._Prismane-like_superfamily,_and_Nickel_insertion_ATPase/GTPase_(CO_dehydrogenase_maturation_factor),_CooC_type

description:
  Mixed, incl. Prismane-like superfamily, and Nickel insertion ATPase/GTPase (CO dehydrogenase maturation factor), CooC type


id: CL:4530
description: CO dehydrogenase/acetyl-CoA synthase delta subunit, and Prismane-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4530_CO_dehydrogenase/acetyl-CoA_synthase_delta_subunit,_and_Prismane-like_superfamily


id: CL:4560
description: Mixed, incl. Uncharacterised protein family CoxE-like, and Peroxidase
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4560_Mixed,_incl._Uncharacterised_protein_family_CoxE-like,_and_Peroxidase


id: CL:4575
description: Formamide metabolic process, and Ureohydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4575_Formamide_metabolic_process,_and_Ureohydrolase


id: CL:4577
description: Histidine metabolism, and Folic acid binding
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4577_Histidine_metabolism,_and_Folic_acid_binding


id: CL:4604
description: Mixed, incl. Alpha-amino acid catabolic process, and D-Arginine and D-ornithine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4604_Mixed,_incl._Alpha-amino_acid_catabolic_process,_and_D-Arginine_and_D-ornithine_metabolism


id: CL:4606
description: Mixed, incl. Alanine metabolic process, and D-Arginine and D-ornithine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4606_Mixed,_incl._Alanine_metabolic_process,_and_D-Arginine_and_D-ornithine_metabolism


id: CL:4610
description: D-Arginine and D-ornithine metabolism, and Cysteine synthase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4610_D-Arginine_and_D-ornithine_metabolism,_and_Cysteine_synthase_activity


id: CL:4636
description: Mixed, incl. Glutamate catabolic process, and Terpene metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4636_Mixed,_incl._Glutamate_catabolic_process,_and_Terpene_metabolic_process


id: CL:4639
description: Glutamate catabolic process, and Terpene metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4639_Glutamate_catabolic_process,_and_Terpene_metabolic_process


id: CL:4662
description: Mostly uncharacterized, incl. Peptidase S26, and Peptidase U32
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4662_Mostly_uncharacterized,_incl._Peptidase_S26,_and_Peptidase_U32


id: CL:4663
description: Mostly uncharacterized, incl. Peptidase S26, and Peptidase U32
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4663_Mostly_uncharacterized,_incl._Peptidase_S26,_and_Peptidase_U32


id: CL:4664
description: Mixed, incl. Peptidase S26, and Peptidase U32
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4664_Mixed,_incl._Peptidase_S26,_and_Peptidase_U32


id: CL:4677
description: Mixed, incl. TT1751-like domain superfamily, and Protein of unknown function (DUF2680)
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4677_Mixed,_incl._TT1751-like_domain_superfamily,_and_Protein_of_unknown_function_(DUF2680)


id: CL:4690
description: Mixed, incl. Aquaporin-like, and Xylose isomerase-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4690_Mixed,_incl._Aquaporin-like,_and_Xylose_isomerase-like_superfamily


id: CL:4699
description: Mixed, incl. Secondary active transmembrane transporter activity, and CoA-ligase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4699_Mixed,_incl._Secondary_active_transmembrane_transporter_activity,_and_CoA-ligase_activity


id: CL:4700
description: Mostly uncharacterized, incl. Sodium/solute symporter, and CoA-ligase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4700_Mostly_uncharacterized,_incl._Sodium/solute_symporter,_and_CoA-ligase_activity


id: CL:4702
description: Mixed, incl. Lipoprotein metabolic process, and Sodium/solute symporter
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4702_Mixed,_incl._Lipoprotein_metabolic_process,_and_Sodium/solute_symporter


id: CL:4703
description: Mixed, incl. Lipoprotein metabolic process, and OsmC/Ohr family
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4703_Mixed,_incl._Lipoprotein_metabolic_process,_and_OsmC/Ohr_family


id: CL:4704
description: Lipoprotein metabolic process, and OsmC/Ohr family
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4704_Lipoprotein_metabolic_process,_and_OsmC/Ohr_family


id: CL:4713
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4713_Mixed,_incl._Vitamin_B12-dependent_methionine_synthase,_activation_domain_superfamily,_and_Queuosine_metabolic_process

description:
  Mixed, incl. Vitamin B12-dependent methionine synthase, activation domain superfamily, and Queuosine metabolic process


id: CL:4722
description: Mixed, incl. Sodium/solute symporter, and Sodium:neurotransmitter symporter
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4722_Mixed,_incl._Sodium/solute_symporter,_and_Sodium:neurotransmitter_symporter


id: CL:4742
description: Mixed, incl. CoA-ligase activity, and Amino acid transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4742_Mixed,_incl._CoA-ligase_activity,_and_Amino_acid_transmembrane_transporter_activity


id: CL:4743
description: Mixed, incl. CoA-ligase activity, and Six-hairpin glycosidase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4743_Mixed,_incl._CoA-ligase_activity,_and_Six-hairpin_glycosidase_superfamily


id: CL:4756
description: Mixed, incl. LysE type translocator, and Vitamin catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4756_Mixed,_incl._LysE_type_translocator,_and_Vitamin_catabolic_process


id: CL:4767
description: Mixed, incl. Phosphotransferase system (PTS), and Na+/H+ antiporter NhaC
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4767_Mixed,_incl._Phosphotransferase_system_(PTS),_and_Na+/H+_antiporter_NhaC


id: CL:4769
description: Cation/H+ exchanger, and Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4769_Cation/H+_exchanger,_and_Nitrogen_regulatory_protein_PII/ATP_phosphoribosyltransferase,_C-terminal


id: CL:4786
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4786_Mostly_uncharacterized,_incl._Nickel_insertion_protein,_and_Pyridinium-3,5-bisthiocarboxylic_acid_mononucleotide_synthase_LarE

description:
  Mostly uncharacterized, incl. Nickel insertion protein, and Pyridinium-3,5-bisthiocarboxylic acid mononucleotide synthase LarE


id: CL:4787
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4787_Mixed,_incl._Nickel_insertion_protein,_and_Pyridinium-3,5-bisthiocarboxylic_acid_mononucleotide_synthase_LarE

description:
  Mixed, incl. Nickel insertion protein, and Pyridinium-3,5-bisthiocarboxylic acid mononucleotide synthase LarE


id: CL:4789
description: Mixed, incl. Phosphopantetheine, and Polysaccharide deacetylase
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4789_Mixed,_incl._Phosphopantetheine,_and_Polysaccharide_deacetylase


id: CL:4806
description: Nickel insertion protein, and Pyridinium-3,5-bisthiocarboxylic acid mononucleotide synthase LarE
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4806_Nickel_insertion_protein,_and_Pyridinium-3,5-bisthiocarboxylic_acid_mononucleotide_synthase_LarE


id: CL:4822
description: Mostly uncharacterized, incl. DNA-binding HTH domain, TetR-type, conserved site, and Cupin domain
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4822_Mostly_uncharacterized,_incl._DNA-binding_HTH_domain,_TetR-type,_conserved_site,_and_Cupin_domain


id: CL:4825
description: Mixed, incl. DNA-binding HTH domain, TetR-type, conserved site, and Cupin domain
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4825_Mixed,_incl._DNA-binding_HTH_domain,_TetR-type,_conserved_site,_and_Cupin_domain


id: CL:4836
description: Mixed, incl. tRNA endonuclease-like domain superfamily, and Transposase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4836_Mixed,_incl._tRNA_endonuclease-like_domain_superfamily,_and_Transposase_activity


id: CL:4847
description: Mixed, incl. Potassium ion transport, and Cytochrome complex assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4847_Mixed,_incl._Potassium_ion_transport,_and_Cytochrome_complex_assembly


id: CL:4848
description: Mixed, incl. Cytochrome complex assembly, and Carbapenem biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4848_Mixed,_incl._Cytochrome_complex_assembly,_and_Carbapenem_biosynthesis


id: CL:4849
description: Mixed, incl. Cytochrome complex assembly, and Carbapenem biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4849_Mixed,_incl._Cytochrome_complex_assembly,_and_Carbapenem_biosynthesis


id: CL:4850
description: Mixed, incl. Cytochrome complex assembly, and Carbapenem biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4850_Mixed,_incl._Cytochrome_complex_assembly,_and_Carbapenem_biosynthesis


id: CL:4866
description: Mixed, incl. Carbapenem biosynthesis, and OBG-type GTPase
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4866_Mixed,_incl._Carbapenem_biosynthesis,_and_OBG-type_GTPase


id: CL:487
description: Mixed, incl. DEAD/DEAH box helicase domain, and DNA topoisomerase, type IA
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:487_Mixed,_incl._DEAD/DEAH_box_helicase_domain,_and_DNA_topoisomerase,_type_IA


id: CL:4877
description: Mixed, incl. CcmH/CycL/Ccl2/NrfF family, and Cardiolipin metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4877_Mixed,_incl._CcmH/CycL/Ccl2/NrfF_family,_and_Cardiolipin_metabolic_process


id: CL:4889
description: Mixed, incl. CcmH/CycL/Ccl2/NrfF family, and Cytochrome c-type biogenesis protein
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4889_Mixed,_incl._CcmH/CycL/Ccl2/NrfF_family,_and_Cytochrome_c-type_biogenesis_protein


id: CL:489
description: Mixed, incl. RQC domain, and DNA topoisomerase, type IA
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:489_Mixed,_incl._RQC_domain,_and_DNA_topoisomerase,_type_IA


id: CL:4903
description: Potassium ion transmembrane transport
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4903_Potassium_ion_transmembrane_transport


id: CL:4922
description: Mixed, incl. Antibiotic metabolic process, and RuvB-like P-loop domain
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4922_Mixed,_incl._Antibiotic_metabolic_process,_and_RuvB-like_P-loop_domain


id: CL:4936
description: Mixed, incl. Helix-turn-helix XRE-family like proteins, and Peptidase M48
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4936_Mixed,_incl._Helix-turn-helix_XRE-family_like_proteins,_and_Peptidase_M48


id: CL:4968
description: Mixed, incl. TAT protein transport complex, and Acetyltransferase (GNAT) family
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4968_Mixed,_incl._TAT_protein_transport_complex,_and_Acetyltransferase_(GNAT)_family


id: CL:4989
description: Acetyltransferase (GNAT) family, and Aspartate family amino acid catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:4989_Acetyltransferase_(GNAT)_family,_and_Aspartate_family_amino_acid_catabolic_process


id: CL:5010
description: Mixed, incl. HTH ArsR-type DNA-binding domain, and Predicted permease
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:5010_Mixed,_incl._HTH_ArsR-type_DNA-binding_domain,_and_Predicted_permease


id: CL:5012
description: Mixed, incl. Predicted permease, and HTH ArsR-type DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:5012_Mixed,_incl._Predicted_permease,_and_HTH_ArsR-type_DNA-binding_domain


id: CL:5013
description: Mixed, incl. Predicted permease, and HTH ArsR-type DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:5013_Mixed,_incl._Predicted_permease,_and_HTH_ArsR-type_DNA-binding_domain


id: CL:5015
description: Mixed, incl. SdpI/YhfL protein family, and HTH ArsR-type DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:5015_Mixed,_incl._SdpI/YhfL_protein_family,_and_HTH_ArsR-type_DNA-binding_domain


id: CL:5036
description: Mixed, incl. OsmC/Ohr family, and Domain of unknown function DUF1540
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:5036_Mixed,_incl._OsmC/Ohr_family,_and_Domain_of_unknown_function_DUF1540


id: CL:5048
description: Mixed, incl. Helix-turn-helix XRE-family like proteins, and Proteolysis
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:5048_Mixed,_incl._Helix-turn-helix_XRE-family_like_proteins,_and_Proteolysis


id: CL:5061
description: Mixed, incl. Response to arsenic-containing substance, and Sterol-sensing domain
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:5061_Mixed,_incl._Response_to_arsenic-containing_substance,_and_Sterol-sensing_domain


id: CL:5062
description: Mixed, incl. Response to arsenic-containing substance, and HTH ArsR-type DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:5062_Mixed,_incl._Response_to_arsenic-containing_substance,_and_HTH_ArsR-type_DNA-binding_domain


id: CL:5064
description: Response to arsenic-containing substance, and Thioredoxin-like fold
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:5064_Response_to_arsenic-containing_substance,_and_Thioredoxin-like_fold


id: CL:5090
description: Sterol-sensing domain, and Lipoprotein transport
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:5090_Sterol-sensing_domain,_and_Lipoprotein_transport


id: CL:5107
description: Mixed, incl. SHOCT domain, and Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:5107_Mixed,_incl._SHOCT_domain,_and_Alkyl_hydroperoxide_reductase_subunit_C/_Thiol_specific_antioxidant


id: CL:5108
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:5108_Mixed,_incl._Alkyl_hydroperoxide_reductase_subunit_C/_Thiol_specific_antioxidant,_and_Cytochrome_C_biogenesis_protein_transmembrane_region

description:
  Mixed, incl. Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant, and Cytochrome C biogenesis protein transmembrane region


id: CL:5128
description: Mixed, incl. DNA metabolic process, and Defense response
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:5128_Mixed,_incl._DNA_metabolic_process,_and_Defense_response


id: CL:5129
description: Mixed, incl. DNA metabolic process, and Response to virus
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:5129_Mixed,_incl._DNA_metabolic_process,_and_Response_to_virus


id: CL:5131
description: Mixed, incl. Defense response, and HEPN domain
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:5131_Mixed,_incl._Defense_response,_and_HEPN_domain


id: CL:5132
description: Mixed, incl. DNA modification, and HEPN domain
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:5132_Mixed,_incl._DNA_modification,_and_HEPN_domain


id: CL:5133
description: Mixed, incl. DNA modification, and PIN domain
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:5133_Mixed,_incl._DNA_modification,_and_PIN_domain


id: CL:5134
description: Mixed, incl. DNA modification, and Helicase
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:5134_Mixed,_incl._DNA_modification,_and_Helicase


id: CL:5137
description: DNA modification, and AAA domain, group 15
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:5137_DNA_modification,_and_AAA_domain,_group_15


id: CL:5163
description: Mixed, incl. PIN domain, and Ribbon-helix-helix
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:5163_Mixed,_incl._PIN_domain,_and_Ribbon-helix-helix


id: CL:5177
description: Ribonuclease HepT-like, and HEPN domain
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:5177_Ribonuclease_HepT-like,_and_HEPN_domain


id: CL:5189
description: Response to virus, and WYL domain
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:5189_Response_to_virus,_and_WYL_domain


id: CL:5201
description: Response to virus, and WYL domain
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:5201_Response_to_virus,_and_WYL_domain


id: CL:5215
description: Mixed, incl. Transposition, and Integrase, catalytic core
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:5215_Mixed,_incl._Transposition,_and_Integrase,_catalytic_core


id: CL:5216
description: Mixed, incl. Transposition, and Fido domain
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:5216_Mixed,_incl._Transposition,_and_Fido_domain


id: CL:5218
description: Mixed, incl. Transposition, and Integrase, catalytic core
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:5218_Mixed,_incl._Transposition,_and_Integrase,_catalytic_core


id: CL:5219
description: Mixed, incl. Integrase, catalytic core, and Transposase sub-family
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:5219_Mixed,_incl._Integrase,_catalytic_core,_and_Transposase_sub-family


id: CL:522
description: DNA topoisomerase, type IIA-like domain superfamily, and DNA replication
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:522_DNA_topoisomerase,_type_IIA-like_domain_superfamily,_and_DNA_replication


id: CL:5230
description: Mixed, incl. UspA, and RNA-directed DNA polymerase
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:5230_Mixed,_incl._UspA,_and_RNA-directed_DNA_polymerase


id: CL:5248
description: Mixed, incl. Fido domain, and Outer membrane efflux protein
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:5248_Mixed,_incl._Fido_domain,_and_Outer_membrane_efflux_protein


id: CL:5258
description: Mixed, incl. Helix-turn-helix domain of resolvase, and Integrase, catalytic core
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:5258_Mixed,_incl._Helix-turn-helix_domain_of_resolvase,_and_Integrase,_catalytic_core


id: CL:5260
description: Tc3 transposase, and Transposition
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:5260_Tc3_transposase,_and_Transposition


id: CL:5284
description: Mostly uncharacterized, incl. UvrD-like helicase C-terminal domain, and Cytolysis
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:5284_Mostly_uncharacterized,_incl._UvrD-like_helicase_C-terminal_domain,_and_Cytolysis


id: CL:5285
description: Mostly uncharacterized, incl. PLD-like domain, and AAA domain, group 15
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:5285_Mostly_uncharacterized,_incl._PLD-like_domain,_and_AAA_domain,_group_15


id: CL:5287
description: Mixed, incl. AAA domain, group 15, and Cysteine desulfurase-related, unknown function
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:5287_Mixed,_incl._AAA_domain,_group_15,_and_Cysteine_desulfurase-related,_unknown_function


id: CL:5308
description: Mixed, incl. PD-(D/E)XK endonuclease-like domain, AddAB-type, and Cytolysis
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:5308_Mixed,_incl._PD-(D/E)XK_endonuclease-like_domain,_AddAB-type,_and_Cytolysis


id: CL:5310
description: Mixed, incl. PD-(D/E)XK endonuclease-like domain, AddAB-type, and Cytolysis
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:5310_Mixed,_incl._PD-(D/E)XK_endonuclease-like_domain,_AddAB-type,_and_Cytolysis


id: CL:5329
description: Mixed, incl. Double zinc ribbon, and Phage tail baseplate hub (GPD)
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:5329_Mixed,_incl._Double_zinc_ribbon,_and_Phage_tail_baseplate_hub_(GPD)


id: CL:5330
description: Mixed, incl. Double zinc ribbon, and Protein of unknown function DUF1385
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:5330_Mixed,_incl._Double_zinc_ribbon,_and_Protein_of_unknown_function_DUF1385


id: CL:5343
description: Mixed, incl. Phage tail baseplate hub (GPD), and Lysozyme-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:5343_Mixed,_incl._Phage_tail_baseplate_hub_(GPD),_and_Lysozyme-like_domain_superfamily


id: CL:5383
description: Mixed, incl. Ribonuclease H superfamily, and DNA integration
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:5383_Mixed,_incl._Ribonuclease_H_superfamily,_and_DNA_integration


id: CL:5387
description: Mixed, incl. Integrase, catalytic core, and P-loop containing nucleoside triphosphate hydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:5387_Mixed,_incl._Integrase,_catalytic_core,_and_P-loop_containing_nucleoside_triphosphate_hydrolase


id: CL:5423
description: Mostly uncharacterized, incl. SipL, SPOCS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:5423_Mostly_uncharacterized,_incl._SipL,_SPOCS_domain


id: CL:553
description: Mixed, incl. ParB/Sulfiredoxin, and GidA associated domain 3
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:553_Mixed,_incl._ParB/Sulfiredoxin,_and_GidA_associated_domain_3


id: CL:555
description: GidA associated domain 3, and GTP-binding protein TrmE/Aminomethyltransferase GcvT, domain 1
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:555_GidA_associated_domain_3,_and_GTP-binding_protein_TrmE/Aminomethyltransferase_GcvT,_domain_1


id: CL:581
description: Mixed, incl. LSM domain superfamily, and Negative regulation of catalytic activity
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:581_Mixed,_incl._LSM_domain_superfamily,_and_Negative_regulation_of_catalytic_activity


id: CL:594
description: Mixed, incl. Holliday junction helicase complex, and Queuosine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:594_Mixed,_incl._Holliday_junction_helicase_complex,_and_Queuosine_biosynthesis


id: CL:595
description: Mostly uncharacterized, incl. TGS domain, and Cell surface
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:595_Mostly_uncharacterized,_incl._TGS_domain,_and_Cell_surface


id: CL:596
description: Mixed, incl. Cell surface, and Peptidase S26
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:596_Mixed,_incl._Cell_surface,_and_Peptidase_S26


id: CL:609
description: Mixed, incl. TGS domain, and D-amino acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:609_Mixed,_incl._TGS_domain,_and_D-amino_acid_metabolic_process


id: CL:620
description: Holliday junction helicase complex, and Queuosine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:620_Holliday_junction_helicase_complex,_and_Queuosine_biosynthesis


id: CL:632
description: Mixed, incl. Ribosome biogenesis, and Domain in cystathionine beta-synthase and other proteins.
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:632_Mixed,_incl._Ribosome_biogenesis,_and_Domain_in_cystathionine_beta-synthase_and_other_proteins.


id: CL:633
description: Mixed, incl. Ribosome biogenesis, and AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:633_Mixed,_incl._Ribosome_biogenesis,_and_AAA_domain


id: CL:635
description: Mixed, incl. AAA domain, and K Homology domain, type 2
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:635_Mixed,_incl._AAA_domain,_and_K_Homology_domain,_type_2


id: CL:655
description: Mixed, incl. Aspartyl/glutamyl-tRNA amidotransferase subunit B-like, and PUA-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:655_Mixed,_incl._Aspartyl/glutamyl-tRNA_amidotransferase_subunit_B-like,_and_PUA-like_superfamily


id: CL:67
description: Mixed, incl. Translation, and Infection with Mycobacterium tuberculosis
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:67_Mixed,_incl._Translation,_and_Infection_with_Mycobacterium_tuberculosis


id: CL:675
description: Mixed, incl. Nucleoside monophosphate metabolic process, and One carbon pool by folate
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:675_Mixed,_incl._Nucleoside_monophosphate_metabolic_process,_and_One_carbon_pool_by_folate


id: CL:676
description: Mixed, incl. Nucleoside monophosphate metabolic process, and One carbon pool by folate
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:676_Mixed,_incl._Nucleoside_monophosphate_metabolic_process,_and_One_carbon_pool_by_folate


id: CL:677
description: Ribonucleoside monophosphate metabolic process, and Nucleobase transport
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:677_Ribonucleoside_monophosphate_metabolic_process,_and_Nucleobase_transport


id: CL:678
description: Ribonucleoside monophosphate metabolic process, and Nucleobase transport
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:678_Ribonucleoside_monophosphate_metabolic_process,_and_Nucleobase_transport


id: CL:679
description: Purine biosynthesis, and Purine nucleobase transport
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:679_Purine_biosynthesis,_and_Purine_nucleobase_transport


id: CL:68
description: Translation, and Ribonucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:68_Translation,_and_Ribonucleoside_triphosphate_biosynthetic_process


id: CL:69
description: Translation, and Ribonucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:69_Translation,_and_Ribonucleoside_triphosphate_biosynthetic_process


id: CL:70
description: Translation, and Ribonucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:70_Translation,_and_Ribonucleoside_triphosphate_biosynthetic_process


id: CL:705
description: GMP biosynthesis, and De novo AMP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:705_GMP_biosynthesis,_and_De_novo_AMP_biosynthetic_process


id: CL:71
description: Translation, and Ribonucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:71_Translation,_and_Ribonucleoside_triphosphate_biosynthetic_process


id: CL:72
description: Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:72_Ribosome,_and_Translation_regulator_activity


id: CL:720
description: Pyrimidine biosynthesis, and Nucleobase transport
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:720_Pyrimidine_biosynthesis,_and_Nucleobase_transport


id: CL:723
description: Pyrimidine biosynthesis, and Xanthine/uracil permease
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:723_Pyrimidine_biosynthesis,_and_Xanthine/uracil_permease


id: CL:73
description: Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:73_Ribosome,_and_Translation_regulator_activity


id: CL:757
description: Mixed, incl. Nucleoside metabolic process, and Deoxyribonucleotide catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:757_Mixed,_incl._Nucleoside_metabolic_process,_and_Deoxyribonucleotide_catabolic_process


id: CL:76
description: Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:76_Ribosome,_and_Translation_regulator_activity


id: CL:760
description: Purine salvage, and Adenine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:760_Purine_salvage,_and_Adenine_metabolic_process


id: CL:775
description: Pyrimidine nucleoside metabolic process, and Phosphorylase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:775_Pyrimidine_nucleoside_metabolic_process,_and_Phosphorylase_superfamily


id: CL:786
description: Mixed, incl. One carbon pool by folate, and Glycine cleavage complex
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:786_Mixed,_incl._One_carbon_pool_by_folate,_and_Glycine_cleavage_complex


id: CL:787
description: Mixed, incl. One carbon pool by folate, and Glycine cleavage complex
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:787_Mixed,_incl._One_carbon_pool_by_folate,_and_Glycine_cleavage_complex


id: CL:788
description: Mixed, incl. Tetrahydrofolate interconversion, and Glycine catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:788_Mixed,_incl._Tetrahydrofolate_interconversion,_and_Glycine_catabolic_process


id: CL:79
description: Ribosome, and Translational elongation
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:79_Ribosome,_and_Translational_elongation


id: CL:790
description: Glycine catabolic process, and Protein lipoylation
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:790_Glycine_catabolic_process,_and_Protein_lipoylation


id: CL:825
description: Mixed, incl. Peptidyl-glutamine methylation, and RF-1 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:825_Mixed,_incl._Peptidyl-glutamine_methylation,_and_RF-1_domain


id: CL:827
description: Mixed, incl. Uracil metabolic process, and Serine hydroxymethyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:827_Mixed,_incl._Uracil_metabolic_process,_and_Serine_hydroxymethyltransferase


id: CL:84
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:84_Structural_constituent_of_ribosome


id: CL:844
description: Mixed, incl. Deoxyribonucleotide biosynthetic process, and DNA synthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:844_Mixed,_incl._Deoxyribonucleotide_biosynthetic_process,_and_DNA_synthesis


id: CL:847
description: Deoxyribonucleotide biosynthetic process, and DNA synthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:847_Deoxyribonucleotide_biosynthetic_process,_and_DNA_synthesis


id: CL:85
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:85_Structural_constituent_of_ribosome


id: CL:867
description: Mixed, incl. Histidine biosynthesis, and Riboflavin metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:867_Mixed,_incl._Histidine_biosynthesis,_and_Riboflavin_metabolic_process


id: CL:869
description: Mixed, incl. Riboflavin metabolic process, and rRNA methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:869_Mixed,_incl._Riboflavin_metabolic_process,_and_rRNA_methyltransferase_activity


id: CL:87
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:87_Structural_constituent_of_ribosome


id: CL:870
description: Mixed, incl. rRNA methyltransferase activity, and PASTA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:870_Mixed,_incl._rRNA_methyltransferase_activity,_and_PASTA_domain


id: CL:872
description: Mixed, incl. rRNA methyltransferase activity, and Lipoic acid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:872_Mixed,_incl._rRNA_methyltransferase_activity,_and_Lipoic_acid_metabolism


id: CL:89
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:89_Structural_constituent_of_ribosome


id: CL:915
description: Mixed, incl. Histidine biosynthesis, and DNA polymerase alpha chain like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:915_Mixed,_incl._Histidine_biosynthesis,_and_DNA_polymerase_alpha_chain_like_domain


id: CL:937
description: Mixed, incl. TonB, C-terminal, and Biopolymer transport protein ExbD/TolR
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:937_Mixed,_incl._TonB,_C-terminal,_and_Biopolymer_transport_protein_ExbD/TolR


id: CL:950
description: Biosynthesis of amino acids, and O-acetylhomoserine/O-acetylserine sulfhydrylase
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:950_Biosynthesis_of_amino_acids,_and_O-acetylhomoserine/O-acetylserine_sulfhydrylase


id: CL:951
description: Alpha-amino acid biosynthetic process, and Arginine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:951_Alpha-amino_acid_biosynthetic_process,_and_Arginine_biosynthesis


id: CL:952
description: Arginine biosynthesis, and Diaminopimelate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:952_Arginine_biosynthesis,_and_Diaminopimelate_metabolic_process


id: CL:953
description: Diaminopimelate metabolic process, and Arginine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:953_Diaminopimelate_metabolic_process,_and_Arginine_biosynthesis


id: CL:954
description: Arginine biosynthesis, and Peptidase dimerisation domain
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:954_Arginine_biosynthesis,_and_Peptidase_dimerisation_domain


id: CL:983
description: Diaminopimelate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:983_Diaminopimelate_biosynthetic_process


id: CL:999
description: D-Glutamine and D-glutamate metabolism, and Glutamate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_142842_STRINGid_CL:999_D-Glutamine_and_D-glutamate_metabolism,_and_Glutamate_biosynthetic_process


id: GO:0000716
description: Transcription-coupled nucleotide-excision repair, DNA damage recognition
memo: https://amigo.geneontology.org/amigo/term/GO:0000716
golevel: 7
name:
  GOBP.STRING_v12.0_142842_STRINGid_GO:0000716_Transcription-coupled_nucleotide-excision_repair,_DNA_damage_recognition


id: GO:0000724
description: Double-strand break repair via homologous recombination
memo: https://amigo.geneontology.org/amigo/term/GO:0000724
golevel: 7
name:
  GOBP.STRING_v12.0_142842_STRINGid_GO:0000724_Double-strand_break_repair_via_homologous_recombination


id: GO:0001073
description: Transcription antitermination factor activity, DNA binding
memo: https://amigo.geneontology.org/amigo/term/GO:0001073
golevel: 2
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0001073_Transcription_antitermination_factor_activity,_DNA_binding


id: GO:0002926
description: tRNA wobble base 5-methoxycarbonylmethyl-2-thiouridinylation
memo: https://amigo.geneontology.org/amigo/term/GO:0002926
golevel: 9
name:
  GOBP.STRING_v12.0_142842_STRINGid_GO:0002926_tRNA_wobble_base_5-methoxycarbonylmethyl-2-thiouridinylation


id: GO:0003848
description: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003848
golevel: 5
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0003848_2-amino-4-hydroxy-6-hydroxymethyldihydropteridine_diphosphokinase_activity


id: GO:0003864
description: 3-methyl-2-oxobutanoate hydroxymethyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003864
golevel: 5
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0003864_3-methyl-2-oxobutanoate_hydroxymethyltransferase_activity


id: GO:0003906
description: DNA-(apurinic or apyrimidinic site) endonuclease activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003906
golevel: 6
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0003906_DNA-(apurinic_or_apyrimidinic_site)_endonuclease_activity


id: GO:0003917
description: DNA topoisomerase type I (single strand cut, ATP-independent) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003917
golevel: 5
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0003917_DNA_topoisomerase_type_I_(single_strand_cut,_ATP-independent)_activity


id: GO:0003918
description: DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003918
golevel: 3
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0003918_DNA_topoisomerase_type_II_(double_strand_cut,_ATP-hydrolyzing)_activity


id: GO:0003949
memo: https://amigo.geneontology.org/amigo/term/GO:0003949
golevel: 5
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0003949_1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide_isomerase_activity

description:
  1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity


id: GO:0003992
description: N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003992
golevel: 5
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0003992_N2-acetyl-L-ornithine:2-oxoglutarate_5-aminotransferase_activity


id: GO:0004015
description: adenosylmethionine-8-amino-7-oxononanoate transaminase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004015
golevel: 5
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0004015_adenosylmethionine-8-amino-7-oxononanoate_transaminase_activity


id: GO:0004018
description: N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004018
golevel: 5
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0004018_N6-(1,2-dicarboxyethyl)AMP_AMP-lyase_(fumarate-forming)_activity


id: GO:0004088
description: Carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004088
golevel: 5
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0004088_Carbamoyl-phosphate_synthase_(glutamine-hydrolyzing)_activity


id: GO:0004317
description: 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004317
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0004317_3-hydroxypalmitoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0004360
description: glutamine-fructose-6-phosphate transaminase (isomerizing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004360
golevel: 6
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0004360_glutamine-fructose-6-phosphate_transaminase_(isomerizing)_activity


id: GO:0004486
description: Methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004486
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0004486_Methylenetetrahydrofolate_dehydrogenase_[NAD(P)+]_activity


id: GO:0004488
description: Methylenetetrahydrofolate dehydrogenase (NADP+) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004488
golevel: 5
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0004488_Methylenetetrahydrofolate_dehydrogenase_(NADP+)_activity


id: GO:0004514
description: Nicotinate-nucleotide diphosphorylase (carboxylating) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004514
golevel: 5
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0004514_Nicotinate-nucleotide_diphosphorylase_(carboxylating)_activity


id: GO:0004604
description: Phosphoadenylyl-sulfate reductase (thioredoxin) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004604
golevel: 5
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0004604_Phosphoadenylyl-sulfate_reductase_(thioredoxin)_activity


id: GO:0004616
description: Phosphogluconate dehydrogenase (decarboxylating) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004616
golevel: 5
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0004616_Phosphogluconate_dehydrogenase_(decarboxylating)_activity


id: GO:0004639
description: Phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004639
golevel: 5
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0004639_Phosphoribosylaminoimidazolesuccinocarboxamide_synthase_activity


id: GO:0004641
description: Phosphoribosylformylglycinamidine cyclo-ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004641
golevel: 5
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0004641_Phosphoribosylformylglycinamidine_cyclo-ligase_activity


id: GO:0004643
description: Phosphoribosylaminoimidazolecarboxamide formyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004643
golevel: 5
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0004643_Phosphoribosylaminoimidazolecarboxamide_formyltransferase_activity


id: GO:0004748
description: Ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0004748
golevel: 6
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0004748_Ribonucleoside-diphosphate_reductase_activity,_thioredoxin_disulfide_as_acceptor


id: GO:0005477
description: Pyruvate secondary active transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0005477
golevel: 6
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0005477_Pyruvate_secondary_active_transmembrane_transporter_activity


id: GO:0006515
description: Protein quality control for misfolded or incompletely synthesized proteins
memo: https://amigo.geneontology.org/amigo/term/GO:0006515
golevel: 7
name:
  GOBP.STRING_v12.0_142842_STRINGid_GO:0006515_Protein_quality_control_for_misfolded_or_incompletely_synthesized_proteins


id: GO:0006614
description: SRP-dependent cotranslational protein targeting to membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0006614
golevel: 6
name:
  GOBP.STRING_v12.0_142842_STRINGid_GO:0006614_SRP-dependent_cotranslational_protein_targeting_to_membrane


id: GO:0007157
description: Heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules
memo: https://amigo.geneontology.org/amigo/term/GO:0007157
golevel: 4
name:
  GOBP.STRING_v12.0_142842_STRINGid_GO:0007157_Heterophilic_cell-cell_adhesion_via_plasma_membrane_cell_adhesion_molecules


id: GO:0008444
description: CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008444
golevel: 6
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0008444_CDP-diacylglycerol-glycerol-3-phosphate_3-phosphatidyltransferase_activity


id: GO:0008534
description: Oxidized purine nucleobase lesion DNA N-glycosylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008534
golevel: 6
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0008534_Oxidized_purine_nucleobase_lesion_DNA_N-glycosylase_activity


id: GO:0008659
description: (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008659
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0008659_(3R)-hydroxymyristoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0008685
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008685
golevel: 4
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0008685_2-C-methyl-D-erythritol_2,4-cyclodiphosphate_synthase_activity


id: GO:0008690
description: 3-deoxy-manno-octulosonate cytidylyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008690
golevel: 6
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0008690_3-deoxy-manno-octulosonate_cytidylyltransferase_activity


id: GO:0008693
description: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008693
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0008693_3-hydroxydecanoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0008703
description: 5-amino-6-(5-phosphoribosylamino)uracil reductase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008703
golevel: 5
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0008703_5-amino-6-(5-phosphoribosylamino)uracil_reductase_activity


id: GO:0008757
description: S-adenosylmethionine-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008757
golevel: 5
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0008757_S-adenosylmethionine-dependent_methyltransferase_activity


id: GO:0008759
description: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008759
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0008759_UDP-3-O-[3-hydroxymyristoyl]_N-acetylglucosamine_deacetylase_activity


id: GO:0008760
description: UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008760
golevel: 4
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0008760_UDP-N-acetylglucosamine_1-carboxyvinyltransferase_activity


id: GO:0008764
description: UDP-N-acetylmuramoylalanine-D-glutamate ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008764
golevel: 5
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0008764_UDP-N-acetylmuramoylalanine-D-glutamate_ligase_activity


id: GO:0008765
description: UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008765
golevel: 5
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0008765_UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate_ligase_activity


id: GO:0008780
description: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008780
golevel: 6
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0008780_acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine_O-acyltransferase_activity


id: GO:0008817
description: cob(I)yrinic acid a,c-diamide adenosyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008817
golevel: 4
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0008817_cob(I)yrinic_acid_a,c-diamide_adenosyltransferase_activity


id: GO:0008835
description: Diaminohydroxyphosphoribosylaminopyrimidine deaminase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008835
golevel: 5
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0008835_Diaminohydroxyphosphoribosylaminopyrimidine_deaminase_activity


id: GO:0008939
description: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008939
golevel: 5
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0008939_Nicotinate-nucleotide-dimethylbenzimidazole_phosphoribosyltransferase_activity


id: GO:0008961
description: Phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008961
golevel: 3
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0008961_Phosphatidylglycerol-prolipoprotein_diacylglyceryl_transferase_activity


id: GO:0008963
description: phospho-N-acetylmuramoyl-pentapeptide-transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008963
golevel: 5
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0008963_phospho-N-acetylmuramoyl-pentapeptide-transferase_activity


id: GO:0008965
description: Phosphoenolpyruvate-protein phosphotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008965
golevel: 5
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0008965_Phosphoenolpyruvate-protein_phosphotransferase_activity


id: GO:0008982
description: protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008982
golevel: 4
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0008982_protein-N(PI)-phosphohistidine-sugar_phosphotransferase_activity


id: GO:0009007
description: Site-specific DNA-methyltransferase (adenine-specific) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0009007
golevel: 5
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0009007_Site-specific_DNA-methyltransferase_(adenine-specific)_activity


id: GO:0009095
description: Aromatic amino acid family biosynthetic process, prephenate pathway
memo: https://amigo.geneontology.org/amigo/term/GO:0009095
golevel: 7
name:
  GOBP.STRING_v12.0_142842_STRINGid_GO:0009095_Aromatic_amino_acid_family_biosynthetic_process,_prephenate_pathway


id: GO:0009130
description: Pyrimidine nucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009130
golevel: 7
name:
  GOBP.STRING_v12.0_142842_STRINGid_GO:0009130_Pyrimidine_nucleoside_monophosphate_biosynthetic_process


id: GO:0009148
description: Pyrimidine nucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009148
golevel: 7
name:
  GOBP.STRING_v12.0_142842_STRINGid_GO:0009148_Pyrimidine_nucleoside_triphosphate_biosynthetic_process


id: GO:0009168
description: Purine ribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009168
golevel: 8
name:
  GOBP.STRING_v12.0_142842_STRINGid_GO:0009168_Purine_ribonucleoside_monophosphate_biosynthetic_process


id: GO:0009173
description: Pyrimidine ribonucleoside monophosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009173
golevel: 8
name:
  GOBP.STRING_v12.0_142842_STRINGid_GO:0009173_Pyrimidine_ribonucleoside_monophosphate_metabolic_process


id: GO:0009174
description: Pyrimidine ribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009174
golevel: 8
name:
  GOBP.STRING_v12.0_142842_STRINGid_GO:0009174_Pyrimidine_ribonucleoside_monophosphate_biosynthetic_process


id: GO:0009175
description: Pyrimidine ribonucleoside monophosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009175
golevel: 8
name:
  GOBP.STRING_v12.0_142842_STRINGid_GO:0009175_Pyrimidine_ribonucleoside_monophosphate_catabolic_process


id: GO:0009176
description: Pyrimidine deoxyribonucleoside monophosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009176
golevel: 8
name:
  GOBP.STRING_v12.0_142842_STRINGid_GO:0009176_Pyrimidine_deoxyribonucleoside_monophosphate_metabolic_process


id: GO:0009177
description: Pyrimidine deoxyribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009177
golevel: 8
name:
  GOBP.STRING_v12.0_142842_STRINGid_GO:0009177_Pyrimidine_deoxyribonucleoside_monophosphate_biosynthetic_process


id: GO:0009196
description: Pyrimidine deoxyribonucleoside diphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009196
golevel: 8
name:
  GOBP.STRING_v12.0_142842_STRINGid_GO:0009196_Pyrimidine_deoxyribonucleoside_diphosphate_metabolic_process


id: GO:0009197
description: Pyrimidine deoxyribonucleoside diphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009197
golevel: 8
name:
  GOBP.STRING_v12.0_142842_STRINGid_GO:0009197_Pyrimidine_deoxyribonucleoside_diphosphate_biosynthetic_process


id: GO:0009206
description: Purine ribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009206
golevel: 8
name:
  GOBP.STRING_v12.0_142842_STRINGid_GO:0009206_Purine_ribonucleoside_triphosphate_biosynthetic_process


id: GO:0009208
description: Pyrimidine ribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009208
golevel: 8
name:
  GOBP.STRING_v12.0_142842_STRINGid_GO:0009208_Pyrimidine_ribonucleoside_triphosphate_metabolic_process


id: GO:0009209
description: Pyrimidine ribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009209
golevel: 8
name:
  GOBP.STRING_v12.0_142842_STRINGid_GO:0009209_Pyrimidine_ribonucleoside_triphosphate_biosynthetic_process


id: GO:0009210
description: Pyrimidine ribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009210
golevel: 8
name:
  GOBP.STRING_v12.0_142842_STRINGid_GO:0009210_Pyrimidine_ribonucleoside_triphosphate_catabolic_process


id: GO:0009211
description: Pyrimidine deoxyribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009211
golevel: 8
name:
  GOBP.STRING_v12.0_142842_STRINGid_GO:0009211_Pyrimidine_deoxyribonucleoside_triphosphate_metabolic_process


id: GO:0009212
description: Pyrimidine deoxyribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009212
golevel: 8
name:
  GOBP.STRING_v12.0_142842_STRINGid_GO:0009212_Pyrimidine_deoxyribonucleoside_triphosphate_biosynthetic_process


id: GO:0009213
description: Pyrimidine deoxyribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009213
golevel: 8
name:
  GOBP.STRING_v12.0_142842_STRINGid_GO:0009213_Pyrimidine_deoxyribonucleoside_triphosphate_catabolic_process


id: GO:0009215
description: Purine deoxyribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009215
golevel: 8
name:
  GOBP.STRING_v12.0_142842_STRINGid_GO:0009215_Purine_deoxyribonucleoside_triphosphate_metabolic_process


id: GO:0009217
description: Purine deoxyribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009217
golevel: 8
name:
  GOBP.STRING_v12.0_142842_STRINGid_GO:0009217_Purine_deoxyribonucleoside_triphosphate_catabolic_process


id: GO:0009401
description: Phosphoenolpyruvate-dependent sugar phosphotransferase system
memo: https://amigo.geneontology.org/amigo/term/GO:0009401
golevel: 5
name:
  GOBP.STRING_v12.0_142842_STRINGid_GO:0009401_Phosphoenolpyruvate-dependent_sugar_phosphotransferase_system


id: GO:0009427
description: Bacterial-type flagellum basal body, distal rod, L ring
memo: https://amigo.geneontology.org/amigo/term/GO:0009427
golevel: 2
name:
  GOCC.STRING_v12.0_142842_STRINGid_GO:0009427_Bacterial-type_flagellum_basal_body,_distal_rod,_L_ring


id: GO:0009428
description: Bacterial-type flagellum basal body, distal rod, P ring
memo: https://amigo.geneontology.org/amigo/term/GO:0009428
golevel: 2
name:
  GOCC.STRING_v12.0_142842_STRINGid_GO:0009428_Bacterial-type_flagellum_basal_body,_distal_rod,_P_ring


id: GO:0009678
description: Pyrophosphate hydrolysis-driven proton transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0009678
golevel: 5
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0009678_Pyrophosphate_hydrolysis-driven_proton_transmembrane_transporter_activity


id: GO:0010557
description: Positive regulation of macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010557
golevel: 7
name:
  GOBP.STRING_v12.0_142842_STRINGid_GO:0010557_Positive_regulation_of_macromolecule_biosynthetic_process


id: GO:0010558
description: Negative regulation of macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010558
golevel: 7
name:
  GOBP.STRING_v12.0_142842_STRINGid_GO:0010558_Negative_regulation_of_macromolecule_biosynthetic_process


id: GO:0015318
description: Inorganic molecular entity transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015318
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0015318_Inorganic_molecular_entity_transmembrane_transporter_activity


id: GO:0015355
description: Secondary active monocarboxylate transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015355
golevel: 5
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0015355_Secondary_active_monocarboxylate_transmembrane_transporter_activity


id: GO:0015415
description: ATPase-coupled phosphate ion transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015415
golevel: 3
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0015415_ATPase-coupled_phosphate_ion_transmembrane_transporter_activity


id: GO:0015451
description: Decarboxylation-driven active transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015451
golevel: 5
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0015451_Decarboxylation-driven_active_transmembrane_transporter_activity


id: GO:0015453
description: Oxidoreduction-driven active transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015453
golevel: 5
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0015453_Oxidoreduction-driven_active_transmembrane_transporter_activity


id: GO:0015651
description: Quaternary ammonium group transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015651
golevel: 3
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0015651_Quaternary_ammonium_group_transmembrane_transporter_activity


id: GO:0015932
description: Nucleobase-containing compound transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015932
golevel: 3
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0015932_Nucleobase-containing_compound_transmembrane_transporter_activity


id: GO:0015975
description: Energy derivation by oxidation of reduced inorganic compounds
memo: https://amigo.geneontology.org/amigo/term/GO:0015975
golevel: 4
name:
  GOBP.STRING_v12.0_142842_STRINGid_GO:0015975_Energy_derivation_by_oxidation_of_reduced_inorganic_compounds


id: GO:0015988
description: Energy coupled proton transmembrane transport, against electrochemical gradient
memo: https://amigo.geneontology.org/amigo/term/GO:0015988
golevel: 6
name:
  GOBP.STRING_v12.0_142842_STRINGid_GO:0015988_Energy_coupled_proton_transmembrane_transport,_against_electrochemical_gradient


id: GO:0016614
description: Oxidoreductase activity, acting on CH-OH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016614
golevel: 3
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0016614_Oxidoreductase_activity,_acting_on_CH-OH_group_of_donors


id: GO:0016616
description: Oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016616
golevel: 4
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0016616_Oxidoreductase_activity,_acting_on_the_CH-OH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016620
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016620
golevel: 4
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0016620_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016625
memo: https://amigo.geneontology.org/amigo/term/GO:0016625
golevel: 4
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0016625_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_iron-sulfur_protein_as_acceptor

description:
  Oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor


id: GO:0016627
description: Oxidoreductase activity, acting on the CH-CH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016627
golevel: 3
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0016627_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors


id: GO:0016628
description: Oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016628
golevel: 4
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0016628_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016634
description: Oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016634
golevel: 4
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0016634_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_oxygen_as_acceptor


id: GO:0016635
memo: https://amigo.geneontology.org/amigo/term/GO:0016635
golevel: 4
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0016635_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_quinone_or_related_compound_as_acceptor

description:
  Oxidoreductase activity, acting on the CH-CH group of donors, quinone or related compound as acceptor


id: GO:0016638
description: Oxidoreductase activity, acting on the CH-NH2 group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016638
golevel: 3
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0016638_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors


id: GO:0016639
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016639
golevel: 4
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0016639_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016642
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016642
golevel: 4
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0016642_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_disulfide_as_acceptor


id: GO:0016645
description: Oxidoreductase activity, acting on the CH-NH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016645
golevel: 3
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0016645_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors


id: GO:0016646
description: Oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016646
golevel: 4
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0016646_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016655
description: Oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016655
golevel: 4
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0016655_Oxidoreductase_activity,_acting_on_NAD(P)H,_quinone_or_similar_compound_as_acceptor


id: GO:0016661
description: Oxidoreductase activity, acting on other nitrogenous compounds as donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016661
golevel: 3
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0016661_Oxidoreductase_activity,_acting_on_other_nitrogenous_compounds_as_donors


id: GO:0016662
description: Oxidoreductase activity, acting on other nitrogenous compounds as donors, cytochrome as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016662
golevel: 4
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0016662_Oxidoreductase_activity,_acting_on_other_nitrogenous_compounds_as_donors,_cytochrome_as_acceptor


id: GO:0016667
description: Oxidoreductase activity, acting on a sulfur group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016667
golevel: 3
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0016667_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors


id: GO:0016668
description: Oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016668
golevel: 4
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0016668_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_NAD(P)_as_acceptor


id: GO:0016671
description: Oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016671
golevel: 4
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0016671_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_disulfide_as_acceptor


id: GO:0016673
description: Oxidoreductase activity, acting on a sulfur group of donors, iron-sulfur protein as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016673
golevel: 4
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0016673_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_iron-sulfur_protein_as_acceptor


id: GO:0016675
description: Oxidoreductase activity, acting on a heme group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016675
golevel: 3
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0016675_Oxidoreductase_activity,_acting_on_a_heme_group_of_donors


id: GO:0016677
description: Oxidoreductase activity, acting on a heme group of donors, nitrogenous group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016677
golevel: 4
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0016677_Oxidoreductase_activity,_acting_on_a_heme_group_of_donors,_nitrogenous_group_as_acceptor


id: GO:0016684
description: Oxidoreductase activity, acting on peroxide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016684
golevel: 3
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0016684_Oxidoreductase_activity,_acting_on_peroxide_as_acceptor


id: GO:0016699
description: Oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016699
golevel: 4
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0016699_Oxidoreductase_activity,_acting_on_hydrogen_as_donor,_iron-sulfur_protein_as_acceptor


id: GO:0016701
description: Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen
memo: https://amigo.geneontology.org/amigo/term/GO:0016701
golevel: 3
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0016701_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen


id: GO:0016703
memo: https://amigo.geneontology.org/amigo/term/GO:0016703
golevel: 4
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0016703_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen,_incorporation_of_one_atom_of_oxygen_(internal_monooxygenases_or_internal_mixed_function_oxidases)

description:
  Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)


id: GO:0016721
description: Oxidoreductase activity, acting on superoxide radicals as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016721
golevel: 3
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0016721_Oxidoreductase_activity,_acting_on_superoxide_radicals_as_acceptor


id: GO:0016724
description: Oxidoreductase activity, acting on metal ions, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016724
golevel: 4
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0016724_Oxidoreductase_activity,_acting_on_metal_ions,_oxygen_as_acceptor


id: GO:0016726
description: Oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016726
golevel: 4
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0016726_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_NAD_or_NADP_as_acceptor


id: GO:0016728
description: Oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016728
golevel: 4
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0016728_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_disulfide_as_acceptor


id: GO:0016730
description: Oxidoreductase activity, acting on iron-sulfur proteins as donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016730
golevel: 3
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0016730_Oxidoreductase_activity,_acting_on_iron-sulfur_proteins_as_donors


id: GO:0016742
description: Hydroxymethyl-, formyl- and related transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0016742
golevel: 4
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0016742_Hydroxymethyl-,_formyl-_and_related_transferase_activity


id: GO:0016747
description: Acyltransferase activity, transferring groups other than amino-acyl groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016747
golevel: 4
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0016747_Acyltransferase_activity,_transferring_groups_other_than_amino-acyl_groups


id: GO:0016765
description: Transferase activity, transferring alkyl or aryl (other than methyl) groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016765
golevel: 3
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0016765_Transferase_activity,_transferring_alkyl_or_aryl_(other_than_methyl)_groups


id: GO:0016772
description: Transferase activity, transferring phosphorus-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016772
golevel: 3
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0016772_Transferase_activity,_transferring_phosphorus-containing_groups


id: GO:0016774
description: Phosphotransferase activity, carboxyl group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016774
golevel: 4
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0016774_Phosphotransferase_activity,_carboxyl_group_as_acceptor


id: GO:0016775
description: Phosphotransferase activity, nitrogenous group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016775
golevel: 4
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0016775_Phosphotransferase_activity,_nitrogenous_group_as_acceptor


id: GO:0016776
description: Phosphotransferase activity, phosphate group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016776
golevel: 4
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0016776_Phosphotransferase_activity,_phosphate_group_as_acceptor


id: GO:0016780
description: Phosphotransferase activity, for other substituted phosphate groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016780
golevel: 4
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0016780_Phosphotransferase_activity,_for_other_substituted_phosphate_groups


id: GO:0016782
description: Transferase activity, transferring sulphur-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016782
golevel: 3
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0016782_Transferase_activity,_transferring_sulphur-containing_groups


id: GO:0016796
memo: https://amigo.geneontology.org/amigo/term/GO:0016796
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0016796_Exonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_5-phosphomonoesters

description:
  Exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5-phosphomonoesters


id: GO:0016810
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
memo: https://amigo.geneontology.org/amigo/term/GO:0016810
golevel: 3
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0016810_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds


id: GO:0016811
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
memo: https://amigo.geneontology.org/amigo/term/GO:0016811
golevel: 4
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0016811_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_linear_amides


id: GO:0016812
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
memo: https://amigo.geneontology.org/amigo/term/GO:0016812
golevel: 4
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0016812_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_cyclic_amides


id: GO:0016813
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines
memo: https://amigo.geneontology.org/amigo/term/GO:0016813
golevel: 4
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0016813_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_linear_amidines


id: GO:0016814
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines
memo: https://amigo.geneontology.org/amigo/term/GO:0016814
golevel: 4
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0016814_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_cyclic_amidines


id: GO:0016818
description: Hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
memo: https://amigo.geneontology.org/amigo/term/GO:0016818
golevel: 4
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0016818_Hydrolase_activity,_acting_on_acid_anhydrides,_in_phosphorus-containing_anhydrides


id: GO:0016855
description: Racemase and epimerase activity, acting on amino acids and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0016855
golevel: 4
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0016855_Racemase_and_epimerase_activity,_acting_on_amino_acids_and_derivatives


id: GO:0016856
description: Racemase and epimerase activity, acting on hydroxy acids and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0016856
golevel: 4
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0016856_Racemase_and_epimerase_activity,_acting_on_hydroxy_acids_and_derivatives


id: GO:0016857
description: Racemase and epimerase activity, acting on carbohydrates and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0016857
golevel: 4
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0016857_Racemase_and_epimerase_activity,_acting_on_carbohydrates_and_derivatives


id: GO:0016861
description: Intramolecular oxidoreductase activity, interconverting aldoses and ketoses
memo: https://amigo.geneontology.org/amigo/term/GO:0016861
golevel: 4
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0016861_Intramolecular_oxidoreductase_activity,_interconverting_aldoses_and_ketoses


id: GO:0016867
description: Intramolecular transferase activity, transferring acyl groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016867
golevel: 4
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0016867_Intramolecular_transferase_activity,_transferring_acyl_groups


id: GO:0016868
description: Intramolecular transferase activity, phosphotransferases
memo: https://amigo.geneontology.org/amigo/term/GO:0016868
golevel: 4
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0016868_Intramolecular_transferase_activity,_phosphotransferases


id: GO:0016869
description: Intramolecular transferase activity, transferring amino groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016869
golevel: 4
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0016869_Intramolecular_transferase_activity,_transferring_amino_groups


id: GO:0016884
description: Carbon-nitrogen ligase activity, with glutamine as amido-N-donor
memo: https://amigo.geneontology.org/amigo/term/GO:0016884
golevel: 4
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0016884_Carbon-nitrogen_ligase_activity,_with_glutamine_as_amido-N-donor


id: GO:0016888
description: Endodeoxyribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016888
golevel: 4
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0016888_Endodeoxyribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016891
description: Endoribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016891
golevel: 4
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0016891_Endoribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016893
memo: https://amigo.geneontology.org/amigo/term/GO:0016893
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0016893_Endonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_5-phosphomonoesters

description:
  Endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5-phosphomonoesters


id: GO:0016895
description: Exodeoxyribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016895
golevel: 6
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0016895_Exodeoxyribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016896
description: Exoribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016896
golevel: 6
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0016896_Exoribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016903
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016903
golevel: 3
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0016903_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors


id: GO:0018339
description: peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid
memo: https://amigo.geneontology.org/amigo/term/GO:0018339
golevel: 8
name:
  GOBP.STRING_v12.0_142842_STRINGid_GO:0018339_peptidyl-L-beta-methylthioaspartic_acid_biosynthetic_process_from_peptidyl-aspartic_acid


id: GO:0019171
description: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0019171
golevel: 5
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0019171_3-hydroxyacyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0019219
description: Regulation of nucleobase-containing compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0019219
golevel: 6
name:
  GOBP.STRING_v12.0_142842_STRINGid_GO:0019219_Regulation_of_nucleobase-containing_compound_metabolic_process


id: GO:0019288
description: Isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
memo: https://amigo.geneontology.org/amigo/term/GO:0019288
golevel: 5
name:
  GOBP.STRING_v12.0_142842_STRINGid_GO:0019288_Isopentenyl_diphosphate_biosynthetic_process,_methylerythritol_4-phosphate_pathway


id: GO:0019294
description: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0019294
golevel: 6
name:
  GOBP.STRING_v12.0_142842_STRINGid_GO:0019294_keto-3-deoxy-D-manno-octulosonic_acid_biosynthetic_process


id: GO:0019379
memo: https://amigo.geneontology.org/amigo/term/GO:0019379
golevel: 5
name:
  GOBP.STRING_v12.0_142842_STRINGid_GO:0019379_Sulfate_assimilation,_phosphoadenylyl_sulfate_reduction_by_phosphoadenylyl-sulfate_reductase_(thioredoxin)

description:
  Sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)


id: GO:0019829
description: ATPase-coupled cation transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0019829
golevel: 3
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0019829_ATPase-coupled_cation_transmembrane_transporter_activity


id: GO:0030604
description: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0030604
golevel: 5
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0030604_1-deoxy-D-xylulose-5-phosphate_reductoisomerase_activity


id: GO:0031235
description: Intrinsic component of the cytoplasmic side of the plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031235
name:
  GOCC.STRING_v12.0_142842_STRINGid_GO:0031235_Intrinsic_component_of_the_cytoplasmic_side_of_the_plasma_membrane


id: GO:0033177
description: Proton-transporting two-sector ATPase complex, proton-transporting domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033177
golevel: 3
name:
  GOCC.STRING_v12.0_142842_STRINGid_GO:0033177_Proton-transporting_two-sector_ATPase_complex,_proton-transporting_domain


id: GO:0033178
description: Proton-transporting two-sector ATPase complex, catalytic domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033178
golevel: 3
name:
  GOCC.STRING_v12.0_142842_STRINGid_GO:0033178_Proton-transporting_two-sector_ATPase_complex,_catalytic_domain


id: GO:0033283
description: ATPase-coupled organic acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033283
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0033283_ATPase-coupled_organic_acid_transmembrane_transporter_activity


id: GO:0033284
description: ATPase-coupled carboxylic acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033284
golevel: 3
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0033284_ATPase-coupled_carboxylic_acid_transmembrane_transporter_activity


id: GO:0033362
description: Lysine biosynthetic process via diaminopimelate, diaminopimelate-aminotransferase pathway
memo: https://amigo.geneontology.org/amigo/term/GO:0033362
golevel: 9
name:
  GOBP.STRING_v12.0_142842_STRINGid_GO:0033362_Lysine_biosynthetic_process_via_diaminopimelate,_diaminopimelate-aminotransferase_pathway


id: GO:0033467
description: CMP-keto-3-deoxy-D-manno-octulosonic acid metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0033467
name:
  GOBP.STRING_v12.0_142842_STRINGid_GO:0033467_CMP-keto-3-deoxy-D-manno-octulosonic_acid_metabolic_process


id: GO:0033468
description: CMP-keto-3-deoxy-D-manno-octulosonic acid biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0033468
golevel: 6
name:
  GOBP.STRING_v12.0_142842_STRINGid_GO:0033468_CMP-keto-3-deoxy-D-manno-octulosonic_acid_biosynthetic_process


id: GO:0033668
description: Negative regulation by symbiont of host apoptotic process
memo: https://amigo.geneontology.org/amigo/term/GO:0033668
golevel: 5
name:
  GOBP.STRING_v12.0_142842_STRINGid_GO:0033668_Negative_regulation_by_symbiont_of_host_apoptotic_process


id: GO:0033818
description: Beta-ketoacyl-acyl-carrier-protein synthase III activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033818
golevel: 5
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0033818_Beta-ketoacyl-acyl-carrier-protein_synthase_III_activity


id: GO:0034023
description: 5-(carboxyamino)imidazole ribonucleotide mutase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0034023
golevel: 4
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0034023_5-(carboxyamino)imidazole_ribonucleotide_mutase_activity


id: GO:0034036
description: Purine ribonucleoside bisphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034036
golevel: 6
name:
  GOBP.STRING_v12.0_142842_STRINGid_GO:0034036_Purine_ribonucleoside_bisphosphate_biosynthetic_process


id: GO:0034249
description: Negative regulation of cellular amide metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034249
golevel: 6
name:
  GOBP.STRING_v12.0_142842_STRINGid_GO:0034249_Negative_regulation_of_cellular_amide_metabolic_process


id: GO:0034250
description: Positive regulation of cellular amide metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034250
golevel: 6
name:
  GOBP.STRING_v12.0_142842_STRINGid_GO:0034250_Positive_regulation_of_cellular_amide_metabolic_process


id: GO:0034404
description: Nucleobase-containing small molecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034404
golevel: 5
name:
  GOBP.STRING_v12.0_142842_STRINGid_GO:0034404_Nucleobase-containing_small_molecule_biosynthetic_process


id: GO:0035592
description: Establishment of protein localization to extracellular region
memo: https://amigo.geneontology.org/amigo/term/GO:0035592
golevel: 4
name:
  GOBP.STRING_v12.0_142842_STRINGid_GO:0035592_Establishment_of_protein_localization_to_extracellular_region


id: GO:0035598
description: N6-threonylcarbomyladenosine methylthiotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0035598
golevel: 5
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0035598_N6-threonylcarbomyladenosine_methylthiotransferase_activity


id: GO:0035998
description: 7,8-dihydroneopterin 3-triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0035998
name:
  GOBP.STRING_v12.0_142842_STRINGid_GO:0035998_7,8-dihydroneopterin_3-triphosphate_biosynthetic_process


id: GO:0036361
description: Racemase activity, acting on amino acids and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0036361
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0036361_Racemase_activity,_acting_on_amino_acids_and_derivatives


id: GO:0036381
description: Pyridoxal 5-phosphate synthase (glutamine hydrolysing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0036381
golevel: 5
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0036381_Pyridoxal_5-phosphate_synthase_(glutamine_hydrolysing)_activity


id: GO:0042083
description: 5,10-methylenetetrahydrofolate-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0042083
golevel: 5
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0042083_5,10-methylenetetrahydrofolate-dependent_methyltransferase_activity


id: GO:0042084
description: 5-methyltetrahydrofolate-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0042084
golevel: 5
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0042084_5-methyltetrahydrofolate-dependent_methyltransferase_activity


id: GO:0042173
description: Regulation of sporulation resulting in formation of a cellular spore
memo: https://amigo.geneontology.org/amigo/term/GO:0042173
golevel: 5
name:
  GOBP.STRING_v12.0_142842_STRINGid_GO:0042173_Regulation_of_sporulation_resulting_in_formation_of_a_cellular_spore


id: GO:0042174
description: Negative regulation of sporulation resulting in formation of a cellular spore
memo: https://amigo.geneontology.org/amigo/term/GO:0042174
golevel: 6
name:
  GOBP.STRING_v12.0_142842_STRINGid_GO:0042174_Negative_regulation_of_sporulation_resulting_in_formation_of_a_cellular_spore


id: GO:0042279
description: Nitrite reductase (cytochrome, ammonia-forming) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0042279
golevel: 5
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0042279_Nitrite_reductase_(cytochrome,_ammonia-forming)_activity


id: GO:0042777
description: Proton motive force-driven plasma membrane ATP synthesis
memo: https://amigo.geneontology.org/amigo/term/GO:0042777
golevel: 9
name:
  GOBP.STRING_v12.0_142842_STRINGid_GO:0042777_Proton_motive_force-driven_plasma_membrane_ATP_synthesis


id: GO:0043225
description: ATPase-coupled inorganic anion transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0043225
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0043225_ATPase-coupled_inorganic_anion_transmembrane_transporter_activity


id: GO:0043242
description: Negative regulation of protein-containing complex disassembly
memo: https://amigo.geneontology.org/amigo/term/GO:0043242
golevel: 6
name:
  GOBP.STRING_v12.0_142842_STRINGid_GO:0043242_Negative_regulation_of_protein-containing_complex_disassembly


id: GO:0043772
description: Acyl-phosphate glycerol-3-phosphate acyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0043772
golevel: 5
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0043772_Acyl-phosphate_glycerol-3-phosphate_acyltransferase_activity


id: GO:0043811
description: Phosphate:acyl-[acyl carrier protein] acyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0043811
golevel: 5
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0043811_Phosphate:acyl-[acyl_carrier_protein]_acyltransferase_activity


id: GO:0044011
description: Single-species biofilm formation on inanimate substrate
memo: https://amigo.geneontology.org/amigo/term/GO:0044011
golevel: 4
name:
  GOBP.STRING_v12.0_142842_STRINGid_GO:0044011_Single-species_biofilm_formation_on_inanimate_substrate


id: GO:0044419
description: Biological process involved in interspecies interaction between organisms
memo: https://amigo.geneontology.org/amigo/term/GO:0044419
golevel: 1
name:
  GOBP.STRING_v12.0_142842_STRINGid_GO:0044419_Biological_process_involved_in_interspecies_interaction_between_organisms


id: GO:0044769
description: ATPase activity, coupled to transmembrane movement of ions, rotational mechanism
memo: https://amigo.geneontology.org/amigo/term/GO:0044769
golevel: 4
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0044769_ATPase_activity,_coupled_to_transmembrane_movement_of_ions,_rotational_mechanism


id: GO:0045156
memo: https://amigo.geneontology.org/amigo/term/GO:0045156
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0045156_Electron_transporter,_transferring_electrons_within_the_cyclic_electron_transport_pathway_of_photosynthesis_activity

description:
  Electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity


id: GO:0045261
description: Proton-transporting ATP synthase complex, catalytic core F(1)
memo: https://amigo.geneontology.org/amigo/term/GO:0045261
name:
  GOCC.STRING_v12.0_142842_STRINGid_GO:0045261_Proton-transporting_ATP_synthase_complex,_catalytic_core_F(1)


id: GO:0045263
description: Proton-transporting ATP synthase complex, coupling factor F(o)
memo: https://amigo.geneontology.org/amigo/term/GO:0045263
name:
  GOCC.STRING_v12.0_142842_STRINGid_GO:0045263_Proton-transporting_ATP_synthase_complex,_coupling_factor_F(o)


id: GO:0045881
description: Positive regulation of sporulation resulting in formation of a cellular spore
memo: https://amigo.geneontology.org/amigo/term/GO:0045881
golevel: 6
name:
  GOBP.STRING_v12.0_142842_STRINGid_GO:0045881_Positive_regulation_of_sporulation_resulting_in_formation_of_a_cellular_spore


id: GO:0045934
description: Negative regulation of nucleobase-containing compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0045934
golevel: 6
name:
  GOBP.STRING_v12.0_142842_STRINGid_GO:0045934_Negative_regulation_of_nucleobase-containing_compound_metabolic_process


id: GO:0045935
description: Positive regulation of nucleobase-containing compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0045935
name:
  GOBP.STRING_v12.0_142842_STRINGid_GO:0045935_Positive_regulation_of_nucleobase-containing_compound_metabolic_process


id: GO:0046400
description: keto-3-deoxy-D-manno-octulosonic acid metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0046400
name:
  GOBP.STRING_v12.0_142842_STRINGid_GO:0046400_keto-3-deoxy-D-manno-octulosonic_acid_metabolic_process


id: GO:0046429
description: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0046429
golevel: 5
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0046429_4-hydroxy-3-methylbut-2-en-1-yl_diphosphate_synthase_activity


id: GO:0046537
description: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0046537
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0046537_2,3-bisphosphoglycerate-independent_phosphoglycerate_mutase_activity


id: GO:0046912
description: Acyltransferase activity, acyl groups converted into alkyl on transfer
memo: https://amigo.geneontology.org/amigo/term/GO:0046912
golevel: 4
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0046912_Acyltransferase_activity,_acyl_groups_converted_into_alkyl_on_transfer


id: GO:0046915
description: Transition metal ion transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0046915
golevel: 6
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0046915_Transition_metal_ion_transmembrane_transporter_activity


id: GO:0046933
description: Proton-transporting ATP synthase activity, rotational mechanism
memo: https://amigo.geneontology.org/amigo/term/GO:0046933
golevel: 3
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0046933_Proton-transporting_ATP_synthase_activity,_rotational_mechanism


id: GO:0046961
description: Proton-transporting ATPase activity, rotational mechanism
memo: https://amigo.geneontology.org/amigo/term/GO:0046961
golevel: 4
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0046961_Proton-transporting_ATPase_activity,_rotational_mechanism


id: GO:0046992
description: Oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond
memo: https://amigo.geneontology.org/amigo/term/GO:0046992
golevel: 3
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0046992_Oxidoreductase_activity,_acting_on_X-H_and_Y-H_to_form_an_X-Y_bond


id: GO:0047451
description: 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0047451
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0047451_3-hydroxyoctanoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0048646
description: Anatomical structure formation involved in morphogenesis
memo: https://amigo.geneontology.org/amigo/term/GO:0048646
golevel: 2
name:
  GOBP.STRING_v12.0_142842_STRINGid_GO:0048646_Anatomical_structure_formation_involved_in_morphogenesis


id: GO:0050485
description: Oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with a disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0050485
golevel: 4
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0050485_Oxidoreductase_activity,_acting_on_X-H_and_Y-H_to_form_an_X-Y_bond,_with_a_disulfide_as_acceptor


id: GO:0050511
description: Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050511
golevel: 6
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0050511_Undecaprenyldiphospho-muramoylpentapeptide_beta-N-acetylglucosaminyltransferase_activity


id: GO:0050515
description: 4-(cytidine 5-diphospho)-2-C-methyl-D-erythritol kinase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050515
golevel: 5
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0050515_4-(cytidine_5-diphospho)-2-C-methyl-D-erythritol_kinase_activity


id: GO:0050518
description: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050518
golevel: 6
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0050518_2-C-methyl-D-erythritol_4-phosphate_cytidylyltransferase_activity


id: GO:0050566
description: asparaginyl-tRNA synthase (glutamine-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050566
golevel: 5
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0050566_asparaginyl-tRNA_synthase_(glutamine-hydrolyzing)_activity


id: GO:0050567
description: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050567
golevel: 5
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0050567_glutaminyl-tRNA_synthase_(glutamine-hydrolyzing)_activity


id: GO:0051003
description: Ligase activity, forming nitrogen-metal bonds, forming coordination complexes
memo: https://amigo.geneontology.org/amigo/term/GO:0051003
golevel: 4
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0051003_Ligase_activity,_forming_nitrogen-metal_bonds,_forming_coordination_complexes


id: GO:0051075
description: S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0051075
golevel: 3
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0051075_S-adenosylmethionine:tRNA_ribosyltransferase-isomerase_activity


id: GO:0051172
description: Negative regulation of nitrogen compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0051172
name:
  GOBP.STRING_v12.0_142842_STRINGid_GO:0051172_Negative_regulation_of_nitrogen_compound_metabolic_process


id: GO:0051173
description: Positive regulation of nitrogen compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0051173
name:
  GOBP.STRING_v12.0_142842_STRINGid_GO:0051173_Positive_regulation_of_nitrogen_compound_metabolic_process


id: GO:0051240
description: Positive regulation of multicellular organismal process
memo: https://amigo.geneontology.org/amigo/term/GO:0051240
golevel: 4
name:
  GOBP.STRING_v12.0_142842_STRINGid_GO:0051240_Positive_regulation_of_multicellular_organismal_process


id: GO:0051703
description: Biological process involved in intraspecies interaction between organisms
memo: https://amigo.geneontology.org/amigo/term/GO:0051703
golevel: 1
name:
  GOBP.STRING_v12.0_142842_STRINGid_GO:0051703_Biological_process_involved_in_intraspecies_interaction_between_organisms


id: GO:0051745
description: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0051745
golevel: 5
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0051745_4-hydroxy-3-methylbut-2-en-1-yl_diphosphate_reductase_activity


id: GO:0051748
description: UTP-monosaccharide-1-phosphate uridylyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0051748
golevel: 6
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0051748_UTP-monosaccharide-1-phosphate_uridylyltransferase_activity


id: GO:0051991
memo: https://amigo.geneontology.org/amigo/term/GO:0051991
golevel: 6
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0051991_UDP-N-acetyl-D-glucosamine:N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenol_4-beta-N-acetylglucosaminlytransferase_activity

description:
  UDP-N-acetyl-D-glucosamine:N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenol 4-beta-N-acetylglucosaminlytransferase activity


id: GO:0051992
memo: https://amigo.geneontology.org/amigo/term/GO:0051992
golevel: 5
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0051992_UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine:undecaprenyl-phosphate_transferase_activity

description:
  UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine:undecaprenyl-phosphate transferase activity


id: GO:0052041
description: Negative regulation by symbiont of host programmed cell death
memo: https://amigo.geneontology.org/amigo/term/GO:0052041
golevel: 6
name:
  GOBP.STRING_v12.0_142842_STRINGid_GO:0052041_Negative_regulation_by_symbiont_of_host_programmed_cell_death


id: GO:0052592
description: Oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0052592
golevel: 4
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0052592_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_with_an_iron-sulfur_protein_as_acceptor


id: GO:0052908
description: 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0052908
golevel: 7
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0052908_16S_rRNA_(adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase_activity


id: GO:0052929
description: ATP:3-cytidine-cytidine-tRNA adenylyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0052929
golevel: 5
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0052929_ATP:3-cytidine-cytidine-tRNA_adenylyltransferase_activity


id: GO:0055052
description: ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing
memo: https://amigo.geneontology.org/amigo/term/GO:0055052
golevel: 5
name:
  GOCC.STRING_v12.0_142842_STRINGid_GO:0055052_ATP-binding_cassette_(ABC)_transporter_complex,_substrate-binding_subunit-containing


id: GO:0060567
description: Negative regulation of DNA-templated transcription, termination
memo: https://amigo.geneontology.org/amigo/term/GO:0060567
golevel: 7
name:
  GOBP.STRING_v12.0_142842_STRINGid_GO:0060567_Negative_regulation_of_DNA-templated_transcription,_termination


id: GO:0061695
description: Transferase complex, transferring phosphorus-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0061695
golevel: 4
name:
  GOCC.STRING_v12.0_142842_STRINGid_GO:0061695_Transferase_complex,_transferring_phosphorus-containing_groups


id: GO:0062014
description: Negative regulation of small molecule metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0062014
golevel: 6
name:
  GOBP.STRING_v12.0_142842_STRINGid_GO:0062014_Negative_regulation_of_small_molecule_metabolic_process


id: GO:0070626
memo: https://amigo.geneontology.org/amigo/term/GO:0070626
golevel: 5
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0070626_(S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)_succinate_lyase_(fumarate-forming)_activity

description:
  (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido) succinate lyase (fumarate-forming) activity


id: GO:0070647
description: Protein modification by small protein conjugation or removal
memo: https://amigo.geneontology.org/amigo/term/GO:0070647
golevel: 7
name:
  GOBP.STRING_v12.0_142842_STRINGid_GO:0070647_Protein_modification_by_small_protein_conjugation_or_removal


id: GO:0071951
description: Conversion of methionyl-tRNA to N-formyl-methionyl-tRNA
memo: https://amigo.geneontology.org/amigo/term/GO:0071951
golevel: 8
name:
  GOBP.STRING_v12.0_142842_STRINGid_GO:0071951_Conversion_of_methionyl-tRNA_to_N-formyl-methionyl-tRNA


id: GO:0072599
description: Establishment of protein localization to endoplasmic reticulum
memo: https://amigo.geneontology.org/amigo/term/GO:0072599
golevel: 5
name:
  GOBP.STRING_v12.0_142842_STRINGid_GO:0072599_Establishment_of_protein_localization_to_endoplasmic_reticulum


id: GO:0097588
description: Archaeal or bacterial-type flagellum-dependent cell motility
memo: https://amigo.geneontology.org/amigo/term/GO:0097588
golevel: 4
name:
  GOBP.STRING_v12.0_142842_STRINGid_GO:0097588_Archaeal_or_bacterial-type_flagellum-dependent_cell_motility


id: GO:0098742
description: Cell-cell adhesion via plasma-membrane adhesion molecules
memo: https://amigo.geneontology.org/amigo/term/GO:0098742
name:
  GOBP.STRING_v12.0_142842_STRINGid_GO:0098742_Cell-cell_adhesion_via_plasma-membrane_adhesion_molecules


id: GO:0106074
description: aminoacyl-tRNA metabolism involved in translational fidelity
memo: https://amigo.geneontology.org/amigo/term/GO:0106074
golevel: 4
name:
  GOBP.STRING_v12.0_142842_STRINGid_GO:0106074_aminoacyl-tRNA_metabolism_involved_in_translational_fidelity


id: GO:0140078
description: Class I DNA-(apurinic or apyrimidinic site) endonuclease activity
memo: https://amigo.geneontology.org/amigo/term/GO:0140078
golevel: 4
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:0140078_Class_I_DNA-(apurinic_or_apyrimidinic_site)_endonuclease_activity


id: GO:1900192
description: Positive regulation of single-species biofilm formation
memo: https://amigo.geneontology.org/amigo/term/GO:1900192
golevel: 5
name:
  GOBP.STRING_v12.0_142842_STRINGid_GO:1900192_Positive_regulation_of_single-species_biofilm_formation


id: GO:1901505
description: Carbohydrate derivative transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:1901505
golevel: 3
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:1901505_Carbohydrate_derivative_transmembrane_transporter_activity


id: GO:1901618
description: Organic hydroxy compound transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:1901618
name:
  GOMF.STRING_v12.0_142842_STRINGid_GO:1901618_Organic_hydroxy_compound_transmembrane_transporter_activity


id: GO:1901800
description: Positive regulation of proteasomal protein catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:1901800
golevel: 8
name:
  GOBP.STRING_v12.0_142842_STRINGid_GO:1901800_Positive_regulation_of_proteasomal_protein_catabolic_process


id: GO:1902021
description: Regulation of bacterial-type flagellum-dependent cell motility
memo: https://amigo.geneontology.org/amigo/term/GO:1902021
golevel: 5
name:
  GOBP.STRING_v12.0_142842_STRINGid_GO:1902021_Regulation_of_bacterial-type_flagellum-dependent_cell_motility


id: GO:1902221
description: Erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:1902221
name:
  GOBP.STRING_v12.0_142842_STRINGid_GO:1902221_Erythrose_4-phosphate/phosphoenolpyruvate_family_amino_acid_metabolic_process


id: GO:1902223
description: Erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:1902223
name:
  GOBP.STRING_v12.0_142842_STRINGid_GO:1902223_Erythrose_4-phosphate/phosphoenolpyruvate_family_amino_acid_biosynthetic_process


id: GO:1903050
description: Regulation of proteolysis involved in protein catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:1903050
golevel: 8
name:
  GOBP.STRING_v12.0_142842_STRINGid_GO:1903050_Regulation_of_proteolysis_involved_in_protein_catabolic_process


id: GO:1903052
description: Positive regulation of proteolysis involved in protein catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:1903052
golevel: 9
name:
  GOBP.STRING_v12.0_142842_STRINGid_GO:1903052_Positive_regulation_of_proteolysis_involved_in_protein_catabolic_process


id: GO:1903507
description: Negative regulation of nucleic acid-templated transcription
memo: https://amigo.geneontology.org/amigo/term/GO:1903507
name:
  GOBP.STRING_v12.0_142842_STRINGid_GO:1903507_Negative_regulation_of_nucleic_acid-templated_transcription


id: GO:1903508
description: Positive regulation of nucleic acid-templated transcription
memo: https://amigo.geneontology.org/amigo/term/GO:1903508
name:
  GOBP.STRING_v12.0_142842_STRINGid_GO:1903508_Positive_regulation_of_nucleic_acid-templated_transcription


id: GO:2000112
description: Regulation of cellular macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:2000112
name:
  GOBP.STRING_v12.0_142842_STRINGid_GO:2000112_Regulation_of_cellular_macromolecule_biosynthetic_process


id: GO:2000113
description: Negative regulation of cellular macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:2000113
name:
  GOBP.STRING_v12.0_142842_STRINGid_GO:2000113_Negative_regulation_of_cellular_macromolecule_biosynthetic_process


id: GOCC:0000015
description: Phosphopyruvate hydratase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000015
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_142842_STRINGid_GOCC:0000015_Phosphopyruvate_hydratase_complex


id: GOCC:0000172
description: Ribonuclease MRP complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000172
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_142842_STRINGid_GOCC:0000172_Ribonuclease_MRP_complex


id: GOCC:0000178
description: Exosome (RNase complex)
memo: https://amigo.geneontology.org/amigo/term/GO:0000178
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_142842_STRINGid_GOCC:0000178_Exosome_(RNase_complex)


id: GOCC:0000324
description: Fungal-type vacuole
memo: https://amigo.geneontology.org/amigo/term/GO:0000324
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_142842_STRINGid_GOCC:0000324_Fungal-type_vacuole


id: GOCC:0000325
description: Plant-type vacuole
memo: https://amigo.geneontology.org/amigo/term/GO:0000325
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_142842_STRINGid_GOCC:0000325_Plant-type_vacuole


id: GOCC:0000329
description: Fungal-type vacuole membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0000329
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_142842_STRINGid_GOCC:0000329_Fungal-type_vacuole_membrane


id: GOCC:0000428
description: DNA-directed RNA polymerase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000428
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_142842_STRINGid_GOCC:0000428_DNA-directed_RNA_polymerase_complex


id: GOCC:0000502
description: Proteasome complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000502
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_142842_STRINGid_GOCC:0000502_Proteasome_complex


id: GOCC:0000775
description: Chromosome, centromeric region
memo: https://amigo.geneontology.org/amigo/term/GO:0000775
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_142842_STRINGid_GOCC:0000775_Chromosome,_centromeric_region


id: GOCC:0000779
description: Condensed chromosome, centromeric region
memo: https://amigo.geneontology.org/amigo/term/GO:0000779
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_142842_STRINGid_GOCC:0000779_Condensed_chromosome,_centromeric_region


id: GOCC:0000781
description: Chromosome, telomeric region
memo: https://amigo.geneontology.org/amigo/term/GO:0000781
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_142842_STRINGid_GOCC:0000781_Chromosome,_telomeric_region


id: GOCC:0000793
description: Condensed chromosome
memo: https://amigo.geneontology.org/amigo/term/GO:0000793
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_142842_STRINGid_GOCC:0000793_Condensed_chromosome


id: GOCC:0000930
description: Gamma-tubulin complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000930
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_142842_STRINGid_GOCC:0000930_Gamma-tubulin_complex


id: GOCC:0000931
description: Gamma-tubulin large complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000931
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_142842_STRINGid_GOCC:0000931_Gamma-tubulin_large_complex


id: GOCC:0002189
description: Ribose phosphate diphosphokinase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0002189
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_142842_STRINGid_GOCC:0002189_Ribose_phosphate_diphosphokinase_complex


id: GOCC:0005576
description: Extracellular region
memo: https://amigo.geneontology.org/amigo/term/GO:0005576
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_142842_STRINGid_GOCC:0005576_Extracellular_region


id: GOCC:0005615
description: Extracellular space
memo: https://amigo.geneontology.org/amigo/term/GO:0005615
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_142842_STRINGid_GOCC:0005615_Extracellular_space


id: GOCC:0005727
description: Extrachromosomal circular DNA
memo: https://amigo.geneontology.org/amigo/term/GO:0005727
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_142842_STRINGid_GOCC:0005727_Extrachromosomal_circular_DNA


id: GOCC:0005732
description: Small nucleolar ribonucleoprotein complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005732
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_142842_STRINGid_GOCC:0005732_Small_nucleolar_ribonucleoprotein_complex


id: GOCC:0005740
description: Mitochondrial envelope
memo: https://amigo.geneontology.org/amigo/term/GO:0005740
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_142842_STRINGid_GOCC:0005740_Mitochondrial_envelope


id: GOCC:0005743
description: Mitochondrial inner membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0005743
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_142842_STRINGid_GOCC:0005743_Mitochondrial_inner_membrane


id: GOCC:0005746
description: Mitochondrial respirasome
memo: https://amigo.geneontology.org/amigo/term/GO:0005746
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_142842_STRINGid_GOCC:0005746_Mitochondrial_respirasome


id: GOCC:0005747
description: Mitochondrial respiratory chain complex I
memo: https://amigo.geneontology.org/amigo/term/GO:0005747
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_142842_STRINGid_GOCC:0005747_Mitochondrial_respiratory_chain_complex_I


id: GOCC:0005759
description: Mitochondrial matrix
memo: https://amigo.geneontology.org/amigo/term/GO:0005759
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_142842_STRINGid_GOCC:0005759_Mitochondrial_matrix


id: GOCC:0005783
description: Endoplasmic reticulum
memo: https://amigo.geneontology.org/amigo/term/GO:0005783
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_142842_STRINGid_GOCC:0005783_Endoplasmic_reticulum


id: GOCC:0005788
description: Endoplasmic reticulum lumen
memo: https://amigo.geneontology.org/amigo/term/GO:0005788
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_142842_STRINGid_GOCC:0005788_Endoplasmic_reticulum_lumen


id: GOCC:0005789
description: Endoplasmic reticulum membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0005789
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_142842_STRINGid_GOCC:0005789_Endoplasmic_reticulum_membrane


id: GOCC:0005793
description: Endoplasmic reticulum-Golgi intermediate compartment
memo: https://amigo.geneontology.org/amigo/term/GO:0005793
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_142842_STRINGid_GOCC:0005793_Endoplasmic_reticulum-Golgi_intermediate_compartment


id: GOCC:0005798
description: Golgi-associated vesicle
memo: https://amigo.geneontology.org/amigo/term/GO:0005798
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_142842_STRINGid_GOCC:0005798_Golgi-associated_vesicle


id: GOCC:0005815
description: Microtubule organizing center
memo: https://amigo.geneontology.org/amigo/term/GO:0005815
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_142842_STRINGid_GOCC:0005815_Microtubule_organizing_center


id: GOCC:0005835
description: Fatty acid synthase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005835
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_142842_STRINGid_GOCC:0005835_Fatty_acid_synthase_complex


id: GOCC:0005839
description: Proteasome core complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005839
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_142842_STRINGid_GOCC:0005839_Proteasome_core_complex


id: GOCC:0005854
description: Nascent polypeptide-associated complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005854
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_142842_STRINGid_GOCC:0005854_Nascent_polypeptide-associated_complex


id: GOCC:0005887
description: Integral component of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0005887
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_142842_STRINGid_GOCC:0005887_Integral_component_of_plasma_membrane


id: GOCC:0005911
description: Cell-cell junction
memo: https://amigo.geneontology.org/amigo/term/GO:0005911
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_142842_STRINGid_GOCC:0005911_Cell-cell_junction


id: GOCC:0005945
description: 6-phosphofructokinase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005945
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_142842_STRINGid_GOCC:0005945_6-phosphofructokinase_complex


id: GOCC:0005948
description: Acetolactate synthase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005948
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_142842_STRINGid_GOCC:0005948_Acetolactate_synthase_complex


id: GOCC:0005951
description: Carbamoyl-phosphate synthase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005951
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_142842_STRINGid_GOCC:0005951_Carbamoyl-phosphate_synthase_complex


id: GOCC:0005960
description: Glycine cleavage complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005960
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_142842_STRINGid_GOCC:0005960_Glycine_cleavage_complex


id: GOCC:0005971
description: Ribonucleoside-diphosphate reductase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005971
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_142842_STRINGid_GOCC:0005971_Ribonucleoside-diphosphate_reductase_complex


id: GOCC:0008076
description: Voltage-gated potassium channel complex
memo: https://amigo.geneontology.org/amigo/term/GO:0008076
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_142842_STRINGid_GOCC:0008076_Voltage-gated_potassium_channel_complex


id: GOCC:0009279
description: Cell outer membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0009279
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_142842_STRINGid_GOCC:0009279_Cell_outer_membrane


id: GOCC:0009288
description: Bacterial-type flagellum
memo: https://amigo.geneontology.org/amigo/term/GO:0009288
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_142842_STRINGid_GOCC:0009288_Bacterial-type_flagellum


id: GOCC:0009316
description: 3-isopropylmalate dehydratase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009316
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_142842_STRINGid_GOCC:0009316_3-isopropylmalate_dehydratase_complex


id: GOCC:0009317
description: acetyl-CoA carboxylase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009317
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_142842_STRINGid_GOCC:0009317_acetyl-CoA_carboxylase_complex


id: GOCC:0009318
description: Exodeoxyribonuclease VII complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009318
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_142842_STRINGid_GOCC:0009318_Exodeoxyribonuclease_VII_complex


id: GOCC:0009326
description: Formate dehydrogenase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009326
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_142842_STRINGid_GOCC:0009326_Formate_dehydrogenase_complex


id: GOCC:0009331
description: glycerol-3-phosphate dehydrogenase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009331
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_142842_STRINGid_GOCC:0009331_glycerol-3-phosphate_dehydrogenase_complex


id: GOCC:0009336
description: Sulfate adenylyltransferase complex (ATP)
memo: https://amigo.geneontology.org/amigo/term/GO:0009336
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_142842_STRINGid_GOCC:0009336_Sulfate_adenylyltransferase_complex_(ATP)


id: GOCC:0009337
description: Sulfite reductase complex (NADPH)
memo: https://amigo.geneontology.org/amigo/term/GO:0009337
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_142842_STRINGid_GOCC:0009337_Sulfite_reductase_complex_(NADPH)


id: GOCC:0009339
description: Glycolate oxidase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009339
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_142842_STRINGid_GOCC:0009339_Glycolate_oxidase_complex


id: GOCC:0009345
description: glycine-tRNA ligase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009345
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_142842_STRINGid_GOCC:0009345_glycine-tRNA_ligase_complex


id: GOCC:0009347
description: Aspartate carbamoyltransferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009347
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_142842_STRINGid_GOCC:0009347_Aspartate_carbamoyltransferase_complex


id: GOCC:0009349
description: Riboflavin synthase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009349
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_142842_STRINGid_GOCC:0009349_Riboflavin_synthase_complex


id: GOCC:0009360
description: DNA polymerase III complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009360
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_142842_STRINGid_GOCC:0009360_DNA_polymerase_III_complex


id: GOCC:0009361
description: succinate-CoA ligase complex (ADP-forming)
memo: https://amigo.geneontology.org/amigo/term/GO:0009361
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_142842_STRINGid_GOCC:0009361_succinate-CoA_ligase_complex_(ADP-forming)


id: GOCC:0009368
description: Endopeptidase Clp complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009368
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_142842_STRINGid_GOCC:0009368_Endopeptidase_Clp_complex


id: GOCC:0009376
description: HslUV protease complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009376
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_142842_STRINGid_GOCC:0009376_HslUV_protease_complex


id: GOCC:0009379
description: Holliday junction helicase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009379
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_142842_STRINGid_GOCC:0009379_Holliday_junction_helicase_complex


id: GOCC:0009380
description: Excinuclease repair complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009380
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_142842_STRINGid_GOCC:0009380_Excinuclease_repair_complex


id: GOCC:0009420
description: Bacterial-type flagellum filament
memo: https://amigo.geneontology.org/amigo/term/GO:0009420
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_142842_STRINGid_GOCC:0009420_Bacterial-type_flagellum_filament


id: GOCC:0009421
description: Bacterial-type flagellum filament cap
memo: https://amigo.geneontology.org/amigo/term/GO:0009421
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_142842_STRINGid_GOCC:0009421_Bacterial-type_flagellum_filament_cap


id: GOCC:0009424
description: Bacterial-type flagellum hook
memo: https://amigo.geneontology.org/amigo/term/GO:0009424
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_142842_STRINGid_GOCC:0009424_Bacterial-type_flagellum_hook


id: GOCC:0009425
description: Bacterial-type flagellum basal body
memo: https://amigo.geneontology.org/amigo/term/GO:0009425
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_142842_STRINGid_GOCC:0009425_Bacterial-type_flagellum_basal_body


id: GOCC:0009426
description: Bacterial-type flagellum basal body, distal rod
memo: https://amigo.geneontology.org/amigo/term/GO:0009426
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_142842_STRINGid_GOCC:0009426_Bacterial-type_flagellum_basal_body,_distal_rod


id: GOCC:0009427
description: Bacterial-type flagellum basal body, distal rod, L ring
memo: https://amigo.geneontology.org/amigo/term/GO:0009427
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_142842_STRINGid_GOCC:0009427_Bacterial-type_flagellum_basal_body,_distal_rod,_L_ring


id: GOCC:0009428
description: Bacterial-type flagellum basal body, distal rod, P ring
memo: https://amigo.geneontology.org/amigo/term/GO:0009428
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_142842_STRINGid_GOCC:0009428_Bacterial-type_flagellum_basal_body,_distal_rod,_P_ring


id: GOCC:0009431
description: Bacterial-type flagellum basal body, MS ring
memo: https://amigo.geneontology.org/amigo/term/GO:0009431
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_142842_STRINGid_GOCC:0009431_Bacterial-type_flagellum_basal_body,_MS_ring


id: GOCC:0009505
description: Plant-type cell wall
memo: https://amigo.geneontology.org/amigo/term/GO:0009505
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_142842_STRINGid_GOCC:0009505_Plant-type_cell_wall


id: GOCC:0009528
description: Plastid inner membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0009528
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_142842_STRINGid_GOCC:0009528_Plastid_inner_membrane


id: GOCC:0009570
description: Chloroplast stroma
memo: https://amigo.geneontology.org/amigo/term/GO:0009570
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_142842_STRINGid_GOCC:0009570_Chloroplast_stroma


id: GOCC:0009706
description: Chloroplast inner membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0009706
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_142842_STRINGid_GOCC:0009706_Chloroplast_inner_membrane


id: GOCC:0009897
description: External side of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0009897
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_142842_STRINGid_GOCC:0009897_External_side_of_plasma_membrane


id: GOCC:0009898
description: Cytoplasmic side of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0009898
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_142842_STRINGid_GOCC:0009898_Cytoplasmic_side_of_plasma_membrane


id: GOCC:0009941
description: Chloroplast envelope
memo: https://amigo.geneontology.org/amigo/term/GO:0009941
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_142842_STRINGid_GOCC:0009941_Chloroplast_envelope


id: GOCC:0010170
description: glucose-1-phosphate adenylyltransferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0010170
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_142842_STRINGid_GOCC:0010170_glucose-1-phosphate_adenylyltransferase_complex


id: GOCC:0012505
description: Endomembrane system
memo: https://amigo.geneontology.org/amigo/term/GO:0012505
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_142842_STRINGid_GOCC:0012505_Endomembrane_system


id: GOCC:0012507
description: ER to Golgi transport vesicle membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0012507
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_142842_STRINGid_GOCC:0012507_ER_to_Golgi_transport_vesicle_membrane


