# pathwayInfo

id: PF02852
description: Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02852
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF02852_Pyridine_nucleotide-disulphide_oxidoreductase,_dimerisation_domain


id: PF02861
description: Clp amino terminal domain, pathogenicity island component
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02861
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF02861_Clp_amino_terminal_domain,_pathogenicity_island_component


id: PF02866
description: Lactate/malate dehydrogenase, alpha/beta C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02866
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF02866_Lactate/malate_dehydrogenase,_alpha/beta_C-terminal_domain


id: PF02867
description: Ribonucleotide reductase, barrel domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02867
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF02867_Ribonucleotide_reductase,_barrel_domain


id: PF02873
description: UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02873
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF02873_UDP-N-acetylenolpyruvoylglucosamine_reductase,_C-terminal_domain


id: PF02874
description: ATP synthase alpha/beta family, beta-barrel domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02874
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF02874_ATP_synthase_alpha/beta_family,_beta-barrel_domain


id: PF02875
description: Mur ligase family, glutamate ligase domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02875
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF02875_Mur_ligase_family,_glutamate_ligase_domain


id: PF02878
description: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02878
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF02878_Phosphoglucomutase/phosphomannomutase,_alpha/beta/alpha_domain_I


id: PF02879
description: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02879
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF02879_Phosphoglucomutase/phosphomannomutase,_alpha/beta/alpha_domain_II


id: PF02880
description: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02880
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF02880_Phosphoglucomutase/phosphomannomutase,_alpha/beta/alpha_domain_III


id: PF02882
description: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02882
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF02882_Tetrahydrofolate_dehydrogenase/cyclohydrolase,_NAD(P)-binding_domain


id: PF02884
description: Polysaccharide lyase family 8, C-terminal beta-sandwich domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02884
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF02884_Polysaccharide_lyase_family_8,_C-terminal_beta-sandwich_domain


id: PF02885
description: Glycosyl transferase family, helical bundle domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02885
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF02885_Glycosyl_transferase_family,_helical_bundle_domain


id: PF02894
description: Oxidoreductase family, C-terminal alpha/beta domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02894
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF02894_Oxidoreductase_family,_C-terminal_alpha/beta_domain


id: PF02897
description: Prolyl oligopeptidase, N-terminal beta-propeller domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02897
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF02897_Prolyl_oligopeptidase,_N-terminal_beta-propeller_domain


id: PF02912
description: Aminoacyl tRNA synthetase class II, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02912
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF02912_Aminoacyl_tRNA_synthetase_class_II,_N-terminal_domain


id: PF02922
description: Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02922
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF02922_Carbohydrate-binding_module_48_(Isoamylase_N-terminal_domain)


id: PF02954
description: Bacterial regulatory protein, Fis family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02954
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF02954_Bacterial_regulatory_protein,_Fis_family


id: PF02965
description: Vitamin B12 dependent methionine synthase, activation domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02965
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF02965_Vitamin_B12_dependent_methionine_synthase,_activation_domain


id: PF03033
description: Glycosyltransferase family 28 N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03033
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF03033_Glycosyltransferase_family_28_N-terminal_domain


id: PF03099
description: Biotin/lipoate A/B protein ligase family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03099
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF03099_Biotin/lipoate_A/B_protein_ligase_family


id: PF03118
description: Bacterial RNA polymerase, alpha chain C terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03118
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF03118_Bacterial_RNA_polymerase,_alpha_chain_C_terminal_domain


id: PF03137
description: Organic Anion Transporter Polypeptide (OATP) family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03137
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF03137_Organic_Anion_Transporter_Polypeptide_(OATP)_family


id: PF03279
description: Bacterial lipid A biosynthesis acyltransferase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03279
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF03279_Bacterial_lipid_A_biosynthesis_acyltransferase


id: PF03331
description: UDP-3-O-acyl N-acetylglycosamine deacetylase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03331
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF03331_UDP-3-O-acyl_N-acetylglycosamine_deacetylase


id: PF03349
description: Outer membrane protein transport protein (OMPP1/FadL/TodX)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03349
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF03349_Outer_membrane_protein_transport_protein_(OMPP1/FadL/TodX)


id: PF03372
description: Endonuclease/Exonuclease/phosphatase family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03372
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF03372_Endonuclease/Exonuclease/phosphatase_family


id: PF03435
description: Saccharopine dehydrogenase NADP binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03435
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF03435_Saccharopine_dehydrogenase_NADP_binding_domain


id: PF03446
description: NAD binding domain of 6-phosphogluconate dehydrogenase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03446
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF03446_NAD_binding_domain_of_6-phosphogluconate_dehydrogenase


id: PF03447
description: Homoserine dehydrogenase, NAD binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03447
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF03447_Homoserine_dehydrogenase,_NAD_binding_domain


id: PF03449
description: Transcription elongation factor, N-terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03449
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF03449_Transcription_elongation_factor,_N-terminal


id: PF03453
description: MoeA N-terminal region (domain I and II)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03453
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF03453_MoeA_N-terminal_region_(domain_I_and_II)


id: PF03460
description: Nitrite/Sulfite reductase ferredoxin-like half domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03460
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF03460_Nitrite/Sulfite_reductase_ferredoxin-like_half_domain


id: PF03544
description: Gram-negative bacterial TonB protein C-terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03544
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF03544_Gram-negative_bacterial_TonB_protein_C-terminal


id: PF03548
description: Outer membrane lipoprotein carrier protein LolA
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03548
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF03548_Outer_membrane_lipoprotein_carrier_protein_LolA


id: PF03551
description: Transcriptional regulator PadR-like family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03551
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF03551_Transcriptional_regulator_PadR-like_family


id: PF03588
description: Leucyl/phenylalanyl-tRNA protein transferase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03588
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF03588_Leucyl/phenylalanyl-tRNA_protein_transferase


id: PF03597
description: Cytochrome oxidase maturation protein cbb3-type
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03597
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF03597_Cytochrome_oxidase_maturation_protein_cbb3-type


id: PF03605
description: Anaerobic c4-dicarboxylate membrane transporter
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03605
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF03605_Anaerobic_c4-dicarboxylate_membrane_transporter


id: PF03626
description: Prokaryotic Cytochrome C oxidase subunit IV
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03626
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF03626_Prokaryotic_Cytochrome_C_oxidase_subunit_IV_


id: PF03629
description: Carbohydrate esterase, sialic acid-specific acetylesterase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03629
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF03629_Carbohydrate_esterase,_sialic_acid-specific_acetylesterase


id: PF03632
description: Glycosyl hydrolase family 65 central catalytic domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03632
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF03632_Glycosyl_hydrolase_family_65_central_catalytic_domain


id: PF03633
description: Glycosyl hydrolase family 65, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03633
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF03633_Glycosyl_hydrolase_family_65,_C-terminal_domain_


id: PF03636
description: Glycosyl hydrolase family 65, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03636
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF03636_Glycosyl_hydrolase_family_65,_N-terminal_domain_


id: PF03648
description: Glycosyl hydrolase family 67 N-terminus
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03648
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF03648_Glycosyl_hydrolase_family_67_N-terminus


id: PF03653
description: Uncharacterised protein family (UPF0093)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03653
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF03653_Uncharacterised_protein_family_(UPF0093)


id: PF03706
description: Lysylphosphatidylglycerol synthase TM region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03706
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF03706_Lysylphosphatidylglycerol_synthase_TM_region


id: PF03717
description: Penicillin-binding Protein dimerisation domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03717
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF03717_Penicillin-binding_Protein_dimerisation_domain


id: PF03719
description: Ribosomal protein S5, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03719
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF03719_Ribosomal_protein_S5,_C-terminal_domain


id: PF03721
description: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03721
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF03721_UDP-glucose/GDP-mannose_dehydrogenase_family,_NAD_binding_domain


id: PF03726
description: Polyribonucleotide nucleotidyltransferase, RNA binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03726
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF03726_Polyribonucleotide_nucleotidyltransferase,_RNA_binding_domain


id: PF03740
description: Pyridoxal phosphate biosynthesis protein PdxJ
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03740
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF03740_Pyridoxal_phosphate_biosynthesis_protein_PdxJ


id: PF03807
description: NADP oxidoreductase coenzyme F420-dependent
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03807
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF03807_NADP_oxidoreductase_coenzyme_F420-dependent


id: PF03814
description: Potassium-transporting ATPase A subunit
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03814
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF03814_Potassium-transporting_ATPase_A_subunit


id: PF03819
description: MazG nucleotide pyrophosphohydrolase domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03819
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF03819_MazG_nucleotide_pyrophosphohydrolase_domain


id: PF03948
description: Ribosomal protein L9, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03948
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF03948_Ribosomal_protein_L9,_C-terminal_domain


id: PF03950
description: tRNA synthetases class I (E and Q), anti-codon binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03950
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF03950_tRNA_synthetases_class_I_(E_and_Q),_anti-codon_binding_domain


id: PF03951
description: Glutamine synthetase, beta-Grasp domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03951
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF03951_Glutamine_synthetase,_beta-Grasp_domain


id: PF03989
description: DNA gyrase C-terminal domain, beta-propeller
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03989
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF03989_DNA_gyrase_C-terminal_domain,_beta-propeller


id: PF04020
description: Mycobacterial 4 TMS phage holin, superfamily IV
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04020
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF04020_Mycobacterial_4_TMS_phage_holin,_superfamily_IV


id: PF04041
description: beta-1,4-mannooligosaccharide phosphorylase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04041
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF04041_beta-1,4-mannooligosaccharide_phosphorylase


id: PF04069
description: Substrate binding domain of ABC-type glycine betaine transport system
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04069
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF04069_Substrate_binding_domain_of_ABC-type_glycine_betaine_transport_system


id: PF04079
description: Segregation and condensation complex subunit ScpB
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04079
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF04079_Segregation_and_condensation_complex_subunit_ScpB


id: PF04095
description: Nicotinate phosphoribosyltransferase (NAPRTase) family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04095
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF04095_Nicotinate_phosphoribosyltransferase_(NAPRTase)_family


id: PF04101
description: Glycosyltransferase family 28 C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04101
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF04101_Glycosyltransferase_family_28_C-terminal_domain


id: PF04127
description: DNA / pantothenate metabolism flavoprotein
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04127
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF04127_DNA_/_pantothenate_metabolism_flavoprotein


id: PF04166
description: Pyridoxal phosphate biosynthetic protein PdxA
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04166
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF04166_Pyridoxal_phosphate_biosynthetic_protein_PdxA


id: PF04168
description: A predicted alpha-helical domain with a conserved ER motif.
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04168
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF04168_A_predicted_alpha-helical_domain_with_a_conserved_ER_motif.


id: PF04244
description: Deoxyribodipyrimidine photo-lyase-related protein
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04244
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF04244_Deoxyribodipyrimidine_photo-lyase-related_protein


id: PF04268
description: Sarcosine oxidase, gamma subunit family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04268
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF04268_Sarcosine_oxidase,_gamma_subunit_family_


id: PF04295
description: D-galactarate dehydratase / Altronate hydrolase, C terminus
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04295
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF04295_D-galactarate_dehydratase_/_Altronate_hydrolase,_C_terminus


id: PF04313
description: Type I restriction enzyme R protein N terminus (HSDR_N)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04313
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF04313_Type_I_restriction_enzyme_R_protein_N_terminus_(HSDR_N)


id: PF04342
description: Putative member of DMT superfamily (DUF486)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04342
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF04342_Putative_member_of_DMT_superfamily_(DUF486)


id: PF04357
description: TamB, inner membrane protein subunit of TAM complex
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04357
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF04357_TamB,_inner_membrane_protein_subunit_of_TAM_complex


id: PF04371
description: Porphyromonas-type peptidyl-arginine deiminase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04371
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF04371_Porphyromonas-type_peptidyl-arginine_deiminase


id: PF04413
description: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04413
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF04413_3-Deoxy-D-manno-octulosonic-acid_transferase_(kdotransferase)


id: PF04613
description: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04613
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF04613_UDP-3-O-[3-hydroxymyristoyl]_glucosamine_N-acyltransferase,_LpxD__


id: PF04679
description: ATP dependent DNA ligase C terminal region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04679
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF04679_ATP_dependent_DNA_ligase_C_terminal_region________


id: PF04685
description: Glycosyl-hydrolase family 116, catalytic region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04685
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF04685_Glycosyl-hydrolase_family_116,_catalytic_region


id: PF04715
description: Anthranilate synthase component I, N terminal region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04715
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF04715_Anthranilate_synthase_component_I,_N_terminal_region


id: PF04760
description: Translation initiation factor IF-2, N-terminal region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04760
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF04760_Translation_initiation_factor_IF-2,_N-terminal_region


id: PF04973
description: Nicotinamide mononucleotide transporter
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04973
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF04973_Nicotinamide_mononucleotide_transporter


id: PF05015
description: RelE-like toxin of type II toxin-antitoxin system HigB
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05015
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF05015_RelE-like_toxin_of_type_II_toxin-antitoxin_system_HigB


id: PF05016
description: ParE toxin of type II toxin-antitoxin system, parDE
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05016
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF05016_ParE_toxin_of_type_II_toxin-antitoxin_system,_parDE


id: PF05173
description: Dihydrodipicolinate reductase, C-terminus
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05173
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF05173_Dihydrodipicolinate_reductase,_C-terminus


id: PF05198
description: Translation initiation factor IF-3, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05198
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF05198_Translation_initiation_factor_IF-3,_N-terminal_domain


id: PF05201
description: Glutamyl-tRNAGlu reductase, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05201
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF05201_Glutamyl-tRNAGlu_reductase,_N-terminal_domain


id: PF05362
description: Lon protease (S16) C-terminal proteolytic domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05362
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF05362_Lon_protease_(S16)_C-terminal_proteolytic_domain


id: PF05430
description: S-adenosyl-L-methionine-dependent methyltransferase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05430
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF05430_S-adenosyl-L-methionine-dependent_methyltransferase


id: PF05592
description: Bacterial alpha-L-rhamnosidase concanavalin-like domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05592
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF05592_Bacterial_alpha-L-rhamnosidase_concanavalin-like_domain


id: PF05960
description: Bacterial protein of unknown function (DUF885)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05960
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF05960_Bacterial_protein_of_unknown_function_(DUF885)


id: PF06167
description: Glucose-regulated metallo-peptidase M90
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06167
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF06167_Glucose-regulated_metallo-peptidase_M90


id: PF06379
description: L-rhamnose-proton symport protein (RhaT)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06379
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF06379_L-rhamnose-proton_symport_protein_(RhaT)


id: PF06415
description: BPG-independent PGAM N-terminus (iPGM_N)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06415
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF06415_BPG-independent_PGAM_N-terminus_(iPGM_N)


id: PF06452
description: Carbohydrate family 9 binding domain-like
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06452
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF06452_Carbohydrate_family_9_binding_domain-like


id: PF06609
description: Fungal trichothecene efflux pump (TRI12)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06609
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF06609_Fungal_trichothecene_efflux_pump_(TRI12)


id: PF06769
description: YoeB-like toxin of bacterial type II toxin-antitoxin system
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06769
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF06769_YoeB-like_toxin_of_bacterial_type_II_toxin-antitoxin_system


id: PF06779
description: Uncharacterised MFS-type transporter YbfB
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06779
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF06779_Uncharacterised_MFS-type_transporter_YbfB


id: PF06832
description: Penicillin-Binding Protein C-terminus Family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06832
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF06832_Penicillin-Binding_Protein_C-terminus_Family


id: PF06835
description: Lipopolysaccharide-assembly, LptC-related
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06835
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF06835_Lipopolysaccharide-assembly,_LptC-related


id: PF06983
description: 3-demethylubiquinone-9 3-methyltransferase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06983
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF06983_3-demethylubiquinone-9_3-methyltransferase


id: PF07221
description: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07221
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF07221_N-acylglucosamine_2-epimerase_(GlcNAc_2-epimerase)


id: PF07477
description: Glycosyl hydrolase family 67 C-terminus
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07477
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF07477_Glycosyl_hydrolase_family_67_C-terminus


id: PF07479
description: NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07479
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF07479_NAD-dependent_glycerol-3-phosphate_dehydrogenase_C-terminus


id: PF07488
description: Glycosyl hydrolase family 67 middle domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07488
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF07488_Glycosyl_hydrolase_family_67_middle_domain


id: PF07521
description: Zn-dependent metallo-hydrolase RNA specificity domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07521
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF07521_Zn-dependent_metallo-hydrolase_RNA_specificity_domain


id: PF07642
description: Putative beta-barrel porin-2, OmpL-like. bbp2
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07642
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF07642_Putative_beta-barrel_porin-2,_OmpL-like._bbp2


id: PF07662
description: Na+ dependent nucleoside transporter C-terminus
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07662
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF07662_Na+_dependent_nucleoside_transporter_C-terminus


id: PF07664
description: Ferrous iron transport protein B C terminus
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07664
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF07664_Ferrous_iron_transport_protein_B_C_terminus


id: PF07669
description: Eco57I restriction-modification methylase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07669
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF07669_Eco57I_restriction-modification_methylase


id: PF07698
description: 7TM receptor with intracellular HD hydrolase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07698
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF07698_7TM_receptor_with_intracellular_HD_hydrolase


id: PF07733
description: Bacterial DNA polymerase III alpha NTPase domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07733
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF07733_Bacterial_DNA_polymerase_III_alpha_NTPase_domain


id: PF07927
description: HicA toxin of bacterial toxin-antitoxin,
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07927
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF07927_HicA_toxin_of_bacterial_toxin-antitoxin,_


id: PF07991
description: Acetohydroxy acid isomeroreductase, NADPH-binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07991
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF07991_Acetohydroxy_acid_isomeroreductase,_NADPH-binding_domain


id: PF07992
description: Pyridine nucleotide-disulphide oxidoreductase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07992
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF07992_Pyridine_nucleotide-disulphide_oxidoreductase


id: PF08124
description: Polysaccharide lyase family 8, N terminal alpha-helical domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08124
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF08124_Polysaccharide_lyase_family_8,_N_terminal_alpha-helical_domain


id: PF08125
description: Mannitol dehydrogenase C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08125
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF08125_Mannitol_dehydrogenase_C-terminal_domain


id: PF08207
description: Elongation factor P (EF-P) KOW-like domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08207
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF08207_Elongation_factor_P_(EF-P)_KOW-like_domain


id: PF08240
description: Alcohol dehydrogenase GroES-like domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08240
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF08240_Alcohol_dehydrogenase_GroES-like_domain


id: PF08264
description: Anticodon-binding domain of tRNA ligase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08264
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF08264_Anticodon-binding_domain_of_tRNA_ligase


id: PF08267
description: Cobalamin-independent synthase, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08267
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF08267_Cobalamin-independent_synthase,_N-terminal_domain


id: PF08275
description: DNA primase catalytic core, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08275
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF08275_DNA_primase_catalytic_core,_N-terminal_domain


id: PF08327
description: Activator of Hsp90 ATPase homolog 1-like protein
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08327
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF08327_Activator_of_Hsp90_ATPase_homolog_1-like_protein


id: PF08379
description: Bacterial transglutaminase-like N-terminal region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08379
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF08379_Bacterial_transglutaminase-like_N-terminal_region


id: PF08388
description: Group II intron, maturase-specific domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08388
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF08388_Group_II_intron,_maturase-specific_domain


id: PF08436
description: 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08436
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF08436_1-deoxy-D-xylulose_5-phosphate_reductoisomerase_C-terminal_domain


id: PF08501
description: Shikimate dehydrogenase substrate binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08501
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF08501_Shikimate_dehydrogenase_substrate_binding_domain


id: PF08532
description: Beta-galactosidase trimerisation domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08532
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF08532_Beta-galactosidase_trimerisation_domain


id: PF08541
description: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08541
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF08541_3-Oxoacyl-[acyl-carrier-protein_(ACP)]_synthase_III_C_terminal__


id: PF08545
description: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08545
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF08545_3-Oxoacyl-[acyl-carrier-protein_(ACP)]_synthase_III


id: PF08660
description: Oligosaccharide biosynthesis protein Alg14 like
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08660
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF08660_Oligosaccharide_biosynthesis_protein_Alg14_like


id: PF08669
description: Glycine cleavage T-protein C-terminal barrel domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08669
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF08669_Glycine_cleavage_T-protein_C-terminal_barrel_domain


id: PF08780
description: Nucleotidyltransferase substrate binding protein like
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08780
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF08780_Nucleotidyltransferase_substrate_binding_protein_like


id: PF08843
description: Nucleotidyl transferase AbiEii toxin, Type IV TA system
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08843
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF08843_Nucleotidyl_transferase_AbiEii_toxin,_Type_IV_TA_system


id: PF09365
description: Conserved hypothetical protein (DUF2461)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09365
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF09365_Conserved_hypothetical_protein_(DUF2461)


id: PF09413
description: Putative prokaryotic signal transducing protein
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09413
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF09413_Putative_prokaryotic_signal_transducing_protein_


id: PF09479
description: Listeria-Bacteroides repeat domain (List_Bact_rpt)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09479
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF09479_Listeria-Bacteroides_repeat_domain_(List_Bact_rpt)


id: PF09527
description: Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09527
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF09527_Putative_F0F1-ATPase_subunit_Ca2+/Mg2+_transporter


id: PF09697
description: Protein of unknown function (Porph_ging)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09697
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF09697_Protein_of_unknown_function_(Porph_ging)


id: PF09822
description: ABC-type uncharacterized transport system
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09822
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF09822_ABC-type_uncharacterized_transport_system


id: PF09832
description: Uncharacterized protein conserved in bacteria (DUF2059)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09832
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF09832_Uncharacterized_protein_conserved_in_bacteria_(DUF2059)


id: PF09917
description: Uncharacterized protein conserved in bacteria (DUF2147)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09917
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF09917_Uncharacterized_protein_conserved_in_bacteria_(DUF2147)


id: PF09922
description: Cell wall-active antibiotics response 4TMS YvqF
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09922
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF09922_Cell_wall-active_antibiotics_response_4TMS_YvqF


id: PF09952
description: Transcriptional regulator, AbiEi antitoxin, Type IV TA system
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09952
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF09952_Transcriptional_regulator,_AbiEi_antitoxin,_Type_IV_TA_system


id: PF09962
description: Uncharacterized conserved protein (DUF2196)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09962
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF09962_Uncharacterized_conserved_protein_(DUF2196)


id: PF09982
description: Uncharacterized protein conserved in bacteria (DUF2219)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09982
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF09982_Uncharacterized_protein_conserved_in_bacteria_(DUF2219)


id: PF10006
description: Uncharacterized conserved protein (DUF2249)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10006
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF10006_Uncharacterized_conserved_protein_(DUF2249)


id: PF10013
description: Uncharacterized protein conserved in bacteria (DUF2256)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10013
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF10013_Uncharacterized_protein_conserved_in_bacteria_(DUF2256)


id: PF10017
description: Histidine-specific methyltransferase, SAM-dependent
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10017
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF10017_Histidine-specific_methyltransferase,_SAM-dependent


id: PF10022
description: Uncharacterized protein conserved in bacteria (DUF2264)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10022
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF10022_Uncharacterized_protein_conserved_in_bacteria_(DUF2264)


id: PF10029
description: Predicted periplasmic protein (DUF2271)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10029
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF10029_Predicted_periplasmic_protein_(DUF2271)


id: PF10117
description: McrBC 5-methylcytosine restriction system component
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10117
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF10117_McrBC_5-methylcytosine_restriction_system_component


id: PF10335
description: Putative nucleotidyltransferase substrate binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10335
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF10335_Putative_nucleotidyltransferase_substrate_binding_domain


id: PF10385
description: RNA polymerase beta subunit external 1 domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10385
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF10385_RNA_polymerase_beta_subunit_external_1_domain


id: PF10410
description: DnaB-helicase binding domain of primase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10410
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF10410_DnaB-helicase_binding_domain_of_primase


id: PF10417
description: C-terminal domain of 1-Cys peroxiredoxin
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10417
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF10417_C-terminal_domain_of_1-Cys_peroxiredoxin


id: PF10438
description: Cyclo-malto-dextrinase C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10438
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF10438_Cyclo-malto-dextrinase_C-terminal_domain


id: PF10509
description: Galactokinase galactose-binding signature
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10509
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF10509_Galactokinase_galactose-binding_signature


id: PF10555
description: Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10555
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF10555_Phospho-N-acetylmuramoyl-pentapeptide-transferase_signature_1_


id: PF10590
description: Pyridoxine 5-phosphate oxidase C-terminal dimerisation region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10590
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF10590_Pyridoxine_5-phosphate_oxidase_C-terminal_dimerisation_region


id: PF10672
description: S-adenosylmethionine-dependent methyltransferase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10672
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF10672_S-adenosylmethionine-dependent_methyltransferase


id: PF10988
description: Putative auto-transporter adhesin, head GIN domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10988
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF10988_Putative_auto-transporter_adhesin,_head_GIN_domain


id: PF11614
description: IG-like fold at C-terminal of FixG, putative oxidoreductase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF11614
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF11614_IG-like_fold_at_C-terminal_of_FixG,_putative_oxidoreductase


id: PF11751
description: Type IX secretion system membrane protein PorP/SprF
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF11751
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF11751_Type_IX_secretion_system_membrane_protein_PorP/SprF


id: PF11762
description: L-arabinose isomerase C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF11762
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF11762_L-arabinose_isomerase_C-terminal_domain


id: PF11799
description: impB/mucB/samB family C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF11799
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF11799_impB/mucB/samB_family_C-terminal_domain


id: PF11818
description: C-terminal domain of tail specific protease (DUF3340)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF11818
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF11818_C-terminal_domain_of_tail_specific_protease_(DUF3340)


id: PF12008
description: Type I restriction and modification enzyme - subunit R C terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12008
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF12008_Type_I_restriction_and_modification_enzyme_-_subunit_R_C_terminal


id: PF12156
description: Putative metal-binding domain of cation transport ATPase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12156
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF12156_Putative_metal-binding_domain_of_cation_transport_ATPase


id: PF12169
description: DNA polymerase III subunits gamma and tau domain III
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12169
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF12169_DNA_polymerase_III_subunits_gamma_and_tau_domain_III


id: PF12320
description: Type 5 capsule protein repressor C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12320
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF12320_Type_5_capsule_protein_repressor_C-terminal_domain


id: PF12437
description: Glutamine synthetase type III N terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12437
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF12437_Glutamine_synthetase_type_III_N_terminal_


id: PF12627
description: Probable RNA and SrmB- binding site of polymerase A
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12627
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF12627_Probable_RNA_and_SrmB-_binding_site_of_polymerase_A


id: PF12729
description: Four helix bundle sensory module for signal transduction
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12729
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF12729_Four_helix_bundle_sensory_module_for_signal_transduction


id: PF12741
description: Susd and RagB outer membrane lipoprotein
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12741
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF12741_Susd_and_RagB_outer_membrane_lipoprotein_


id: PF12769
description: 4TM region of pyridine nucleotide transhydrogenase, mitoch
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12769
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF12769_4TM_region_of_pyridine_nucleotide_transhydrogenase,_mitoch


id: PF12771
description: Starch-binding associating with outer membrane
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12771
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF12771_Starch-binding_associating_with_outer_membrane


id: PF12850
description: Calcineurin-like phosphoesterase superfamily domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12850
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF12850_Calcineurin-like_phosphoesterase_superfamily_domain


id: PF12866
description: Protein of unknown function (DUF3823) N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12866
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF12866_Protein_of_unknown_function_(DUF3823)_N-terminal_domain


id: PF12904
description: Putative collagen-binding domain of a collagenase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12904
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF12904_Putative_collagen-binding_domain_of_a_collagenase_


id: PF12950
description: TaqI-like C-terminal specificity domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12950
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF12950_TaqI-like_C-terminal_specificity_domain


id: PF12969
description: Domain of Unknown Function with PDB structure (DUF3857)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12969
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF12969_Domain_of_Unknown_Function_with_PDB_structure_(DUF3857)


id: PF12970
description: Domain of Unknown Function with PDB structure (DUF3858)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12970
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF12970_Domain_of_Unknown_Function_with_PDB_structure_(DUF3858)


id: PF13085
description: 2Fe-2S iron-sulfur cluster binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13085
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF13085_2Fe-2S_iron-sulfur_cluster_binding_domain


id: PF13231
description: Dolichyl-phosphate-mannose-protein mannosyltransferase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13231
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF13231_Dolichyl-phosphate-mannose-protein_mannosyltransferase


id: PF13335
description: Magnesium chelatase, subunit ChlI C-terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13335
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF13335_Magnesium_chelatase,_subunit_ChlI_C-terminal


id: PF13370
description: 4Fe-4S single cluster domain of Ferredoxin I
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13370
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF13370_4Fe-4S_single_cluster_domain_of_Ferredoxin_I


id: PF13376
description: Bacteriocin-protection, YdeI or OmpD-Associated
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13376
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF13376_Bacteriocin-protection,_YdeI_or_OmpD-Associated


id: PF13377
description: Periplasmic binding protein-like domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13377
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF13377_Periplasmic_binding_protein-like_domain


id: PF13385
description: Concanavalin A-like lectin/glucanases superfamily
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13385
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF13385_Concanavalin_A-like_lectin/glucanases_superfamily


id: PF13386
description: Cytochrome C biogenesis protein transmembrane region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13386
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF13386_Cytochrome_C_biogenesis_protein_transmembrane_region_


id: PF13442
description: Cytochrome C oxidase, cbb3-type, subunit III
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13442
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF13442_Cytochrome_C_oxidase,_cbb3-type,_subunit_III_


id: PF13491
description: 4TM region of DNA translocase FtsK/SpoIIIE
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13491
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF13491_4TM_region_of_DNA_translocase_FtsK/SpoIIIE


id: PF13505
description: Outer membrane protein beta-barrel domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13505
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF13505_Outer_membrane_protein_beta-barrel_domain


id: PF13531
description: Bacterial extracellular solute-binding protein
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13531
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF13531_Bacterial_extracellular_solute-binding_protein


id: PF13568
description: Outer membrane protein beta-barrel domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13568
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF13568_Outer_membrane_protein_beta-barrel_domain


id: PF13588
description: Type I restriction enzyme R protein N terminus (HSDR_N)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13588
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF13588_Type_I_restriction_enzyme_R_protein_N_terminus_(HSDR_N)


id: PF13597
description: Anaerobic ribonucleoside-triphosphate reductase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13597
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF13597_Anaerobic_ribonucleoside-triphosphate_reductase


id: PF13620
description: Carboxypeptidase regulatory-like domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13620
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF13620_Carboxypeptidase_regulatory-like_domain


id: PF13653
description: Glycerophosphoryl diester phosphodiesterase family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13653
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF13653_Glycerophosphoryl_diester_phosphodiesterase_family


id: PF13720
description: Udp N-acetylglucosamine O-acyltransferase; Domain 2
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13720
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF13720_Udp_N-acetylglucosamine_O-acyltransferase;_Domain_2


id: PF13729
description: F plasmid transfer operon, TraF, protein
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13729
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF13729_F_plasmid_transfer_operon,_TraF,_protein


id: PF13738
description: Pyridine nucleotide-disulphide oxidoreductase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13738
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF13738_Pyridine_nucleotide-disulphide_oxidoreductase


id: PF13749
description: Putative ATP-dependent DNA helicase recG C-terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13749
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF13749_Putative_ATP-dependent_DNA_helicase_recG_C-terminal


id: PF13787
description: Protein of unknown function with HXXEE motif
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13787
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF13787_Protein_of_unknown_function_with_HXXEE_motif


id: PF13807
description: G-rich domain on putative tyrosine kinase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13807
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF13807_G-rich_domain_on_putative_tyrosine_kinase


id: PF13975
description: Gag-polyprotein putative aspartyl protease
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13975
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF13975_Gag-polyprotein_putative_aspartyl_protease


id: PF14200
description: Ricin-type beta-trefoil lectin domain-like
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14200
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF14200_Ricin-type_beta-trefoil_lectin_domain-like


id: PF14213
description: STAS-like domain of unknown function (DUF4325)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14213
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF14213_STAS-like_domain_of_unknown_function_(DUF4325)


id: PF14226
description: Non-haem dioxygenase in morphine synthesis N-terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14226
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF14226_Non-haem_dioxygenase_in_morphine_synthesis_N-terminal


id: PF14322
description: Starch-binding associating with outer membrane
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14322
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF14322_Starch-binding_associating_with_outer_membrane


id: PF14498
description: Glycosyl hydrolase family 65, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14498
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF14498_Glycosyl_hydrolase_family_65,_N-terminal_domain


id: PF14509
description: Glycosyl-hydrolase 97 C-terminal, oligomerisation
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14509
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF14509_Glycosyl-hydrolase_97_C-terminal,_oligomerisation


id: PF14572
description: Phosphoribosyl synthetase-associated domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14572
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF14572_Phosphoribosyl_synthetase-associated_domain


id: PF14602
description: Hexapeptide repeat of succinyl-transferase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14602
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF14602_Hexapeptide_repeat_of_succinyl-transferase


id: PF14667
description: Polysaccharide biosynthesis C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14667
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF14667_Polysaccharide_biosynthesis_C-terminal_domain


id: PF14683
description: Polysaccharide lyase family 4, domain III
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14683
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF14683_Polysaccharide_lyase_family_4,_domain_III


id: PF14691
description: Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14691
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF14691_Dihydroprymidine_dehydrogenase_domain_II,_4Fe-4S_cluster


id: PF14693
description: Ribosomal protein TL5, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14693
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF14693_Ribosomal_protein_TL5,_C-terminal_domain


id: PF14714
description: KH-domain-like of EngA bacterial GTPase enzymes, C-terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14714
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF14714_KH-domain-like_of_EngA_bacterial_GTPase_enzymes,_C-terminal


id: PF14715
description: N-terminal domain of cytochrome oxidase-cbb3, FixP
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14715
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF14715_N-terminal_domain_of_cytochrome_oxidase-cbb3,_FixP_


id: PF14730
description: Domain of unknown function (DUF4468) with TBP-like fold
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14730
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF14730_Domain_of_unknown_function_(DUF4468)_with_TBP-like_fold


id: PF14748
description: Pyrroline-5-carboxylate reductase dimerisation
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14748
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF14748_Pyrroline-5-carboxylate_reductase_dimerisation


id: PF14805
description: Tetrahydrodipicolinate N-succinyltransferase N-terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14805
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF14805_Tetrahydrodipicolinate_N-succinyltransferase_N-terminal


id: PF14833
description: NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14833
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF14833_NAD-binding_of_NADP-dependent_3-hydroxyisobutyrate_dehydrogenase


id: PF14870
description: Photosynthesis system II assembly factor YCF48
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14870
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF14870_Photosynthesis_system_II_assembly_factor_YCF48


id: PF14905
description: Outer membrane protein beta-barrel family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14905
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF14905_Outer_membrane_protein_beta-barrel_family


id: PF15738
description: Bacterial toxin of type II toxin-antitoxin system, YafQ
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF15738
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF15738_Bacterial_toxin_of_type_II_toxin-antitoxin_system,_YafQ_


id: PF16078
description: 2-oxoglutarate dehydrogenase N-terminus
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16078
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF16078_2-oxoglutarate_dehydrogenase_N-terminus


id: PF16177
description: Acetyl-coenzyme A synthetase N-terminus
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16177
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF16177_Acetyl-coenzyme_A_synthetase_N-terminus


id: PF16198
description: tRNA pseudouridylate synthase B C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16198
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF16198_tRNA_pseudouridylate_synthase_B_C-terminal_domain


id: PF16320
description: Ribosomal protein L7/L12 dimerisation domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16320
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF16320_Ribosomal_protein_L7/L12_dimerisation_domain


id: PF16327
description: Cytochrome c-type biogenesis protein CcmF C-terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16327
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF16327_Cytochrome_c-type_biogenesis_protein_CcmF_C-terminal


id: PF16370
description: C terminal of Calcineurin-like phosphoesterase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16370
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF16370_C_terminal_of_Calcineurin-like_phosphoesterase


id: PF16371
description: N terminal of Calcineurin-like phosphoesterase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16371
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF16371_N_terminal_of_Calcineurin-like_phosphoesterase


id: PF16576
description: Barrel-sandwich domain of CusB or HlyD membrane-fusion
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16576
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF16576_Barrel-sandwich_domain_of_CusB_or_HlyD_membrane-fusion


id: PF16653
description: Saccharopine dehydrogenase C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16653
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF16653_Saccharopine_dehydrogenase_C-terminal_domain


id: PF16655
description: PhoD-like phosphatase, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16655
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF16655_PhoD-like_phosphatase,_N-terminal_domain


id: PF16658
description: Class II release factor RF3, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16658
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF16658_Class_II_release_factor_RF3,_C-terminal_domain


id: PF16670
description: Phosphoinositide phospholipase C, Ca2+-dependent
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16670
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF16670_Phosphoinositide_phospholipase_C,_Ca2+-dependent


id: PF16870
description: 2-oxoglutarate dehydrogenase C-terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16870
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF16870_2-oxoglutarate_dehydrogenase_C-terminal


id: PF16874
description: Glycosyl hydrolase family 36 C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16874
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF16874_Glycosyl_hydrolase_family_36_C-terminal_domain


id: PF16875
description: Glycosyl hydrolase family 36 N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16875
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF16875_Glycosyl_hydrolase_family_36_N-terminal_domain


id: PF16881
description: N-terminal domain of lipoyl synthase of Radical_SAM family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16881
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF16881_N-terminal_domain_of_lipoyl_synthase_of_Radical_SAM_family


id: PF16916
description: Dimerisation domain of Zinc Transporter
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16916
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF16916_Dimerisation_domain_of_Zinc_Transporter


id: PF17136
description: Ribosomal proteins 50S L24/mitochondrial 39S L24
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF17136
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF17136_Ribosomal_proteins_50S_L24/mitochondrial_39S_L24


id: PF17189
description: Glycosyl hydrolase family 30 beta sandwich domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF17189
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF17189_Glycosyl_hydrolase_family_30_beta_sandwich_domain


id: PF17389
description: Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF17389
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF17389_Bacterial_alpha-L-rhamnosidase_6_hairpin_glycosidase_domain


id: PF17390
description: Bacterial alpha-L-rhamnosidase C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF17390
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF17390_Bacterial_alpha-L-rhamnosidase_C-terminal_domain


id: PF17450
description: Alpha galactosidase A C-terminal beta sandwich domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF17450
name:
  Protein Domains (Pfam).STRING_v12.0_1434752_STRINGid_PF17450_Alpha_galactosidase_A_C-terminal_beta_sandwich_domain


id: SM00046
description: Diacylglycerol kinase catalytic domain (presumed)
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00046
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM00046_Diacylglycerol_kinase_catalytic_domain_(presumed)


id: SM00065
description: Domain present in phytochromes and cGMP-specific phosphodiesterases.
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00065
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM00065_Domain_present_in_phytochromes_and_cGMP-specific_phosphodiesterases.


id: SM00086
description: Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00086
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM00086_Motif_C-terminal_to_PAS_motifs_(likely_to_contribute_to_PAS_structural_domain)


id: SM00089
description: Repeats in polycystic kidney disease 1 (PKD1) and other proteins
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00089
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM00089_Repeats_in_polycystic_kidney_disease_1_(PKD1)_and_other_proteins


id: SM00100
description: Cyclic nucleotide-monophosphate binding domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00100
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM00100_Cyclic_nucleotide-monophosphate_binding_domain


id: SM00116
description: Domain in cystathionine beta-synthase and other proteins.
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00116
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM00116_Domain_in_cystathionine_beta-synthase_and_other_proteins.


id: SM00138
description: Methyltransferase, chemotaxis proteins
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00138
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM00138_Methyltransferase,_chemotaxis_proteins


id: SM00195
description: Dual specificity phosphatase, catalytic domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00195
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM00195_Dual_specificity_phosphatase,_catalytic_domain


id: SM00226
description: Low molecular weight phosphatase family
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00226
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM00226_Low_molecular_weight_phosphatase_family


id: SM00228
description: Domain present in PSD-95, Dlg, and ZO-1/2.
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00228
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM00228_Domain_present_in_PSD-95,_Dlg,_and_ZO-1/2.


id: SM00237
description: Domains in Na-Ca exchangers and integrin-beta4
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00237
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM00237_Domains_in_Na-Ca_exchangers_and_integrin-beta4


id: SM00239
description: Protein kinase C conserved region 2 (CalB)
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00239
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM00239_Protein_kinase_C_conserved_region_2_(CalB)


id: SM00271
description: DnaJ molecular chaperone homology domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00271
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM00271_DnaJ_molecular_chaperone_homology_domain


id: SM00278
description: Helix-hairpin-helix DNA-binding motif class 1
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00278
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM00278_Helix-hairpin-helix_DNA-binding_motif_class_1


id: SM00279
description: Helix-hairpin-helix class 2 (Pol1 family) motifs
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00279
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM00279_Helix-hairpin-helix_class_2_(Pol1_family)_motifs


id: SM00304
description: HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00304
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM00304_HAMP_(Histidine_kinases,_Adenylyl_cyclases,_Methyl_binding_proteins,_Phosphatases)_domain


id: SM00316
description: Ribosomal protein S1-like RNA-binding domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00316
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM00316_Ribosomal_protein_S1-like_RNA-binding_domain


id: SM00327
description: Von Willebrand factor (vWF) type A domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00327
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM00327_Von_Willebrand_factor_(vWF)_type_A_domain


id: SM00342
description: Helix_turn_helix, arabinose operon control protein
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00342
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM00342_Helix_turn_helix,_arabinose_operon_control_protein


id: SM00345
description: Helix_turn_helix gluconate operon transcriptional repressor
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00345
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM00345_Helix_turn_helix_gluconate_operon_transcriptional_repressor


id: SM00347
description: Helix_turn_helix multiple antibiotic resistance protein
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00347
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM00347_Helix_turn_helix_multiple_antibiotic_resistance_protein


id: SM00354
description: Helix_turn _helix lactose operon repressor
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00354
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM00354_Helix_turn__helix_lactose_operon_repressor


id: SM00359
description: Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00359
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM00359_Putative_RNA-binding_Domain_in_PseudoUridine_synthase_and_Archaeosine_transglycosylase


id: SM00382
description: ATPases associated with a variety of cellular activities
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00382
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM00382_ATPases_associated_with_a_variety_of_cellular_activities


id: SM00411
description: Bacterial (prokaryotic) histone like domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00411
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM00411_Bacterial_(prokaryotic)_histone_like_domain


id: SM00418
description: Helix_turn_helix, Arsenical Resistance Operon Repressor
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00418
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM00418_Helix_turn_helix,_Arsenical_Resistance_Operon_Repressor


id: SM00419
description: Helix_turn_helix, cAMP Regulatory protein
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00419
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM00419_Helix_turn_helix,_cAMP_Regulatory_protein


id: SM00420
description: Helix_turn_helix, Deoxyribose operon repressor
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00420
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM00420_Helix_turn_helix,_Deoxyribose_operon_repressor


id: SM00429
description: Ig-like, plexins, transcription factors
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00429
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM00429_Ig-like,_plexins,_transcription_factors


id: SM00436
description: Bacterial DNA topoisomeraes I ATP-binding domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00436
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM00436_Bacterial_DNA_topoisomeraes_I_ATP-binding_domain


id: SM00437
description: Bacterial DNA topoisomerase I DNA-binding domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00437
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM00437_Bacterial_DNA_topoisomerase_I_DNA-binding_domain


id: SM00460
description: Transglutaminase/protease-like homologues
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00460
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM00460_Transglutaminase/protease-like_homologues


id: SM00464
description: Found in ATP-dependent protease La (LON)
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00464
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM00464_Found_in_ATP-dependent_protease_La_(LON)


id: SM00471
description: Metal dependent phosphohydrolases with conserved HD motif.
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00471
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM00471_Metal_dependent_phosphohydrolases_with_conserved_HD_motif.


id: SM00479
description: Exonuclease domain in DNA-polymerase alpha and epsilon chain, ribonuclease T and other exonucleases
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00479
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM00479_Exonuclease_domain_in_DNA-polymerase_alpha_and_epsilon_chain,_ribonuclease_T_and_other_exonucleases


id: SM00481
description: DNA polymerase alpha chain like domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00481
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM00481_DNA_polymerase_alpha_chain_like_domain


id: SM00490
description: Helicase superfamily c-terminal domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00490
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM00490_Helicase_superfamily_c-terminal_domain


id: SM00493
description: Topoisomerases, DnaG-type primases, OLD family nucleases and RecR proteins
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00493
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM00493_Topoisomerases,_DnaG-type_primases,_OLD_family_nucleases_and_RecR_proteins


id: SM00525
description: Iron-sulpphur binding domain in DNA-(apurinic or apyrimidinic site) lyase (subfamily of ENDO3)
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00525
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM00525_Iron-sulpphur_binding_domain_in_DNA-(apurinic_or_apyrimidinic_site)_lyase_(subfamily_of_ENDO3)


id: SM00529
description: Helix-turn-helix diphteria tox regulatory element
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00529
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM00529_Helix-turn-helix_diphteria_tox_regulatory_element


id: SM00530
description: Helix-turn-helix XRE-family like proteins
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00530
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM00530_Helix-turn-helix_XRE-family_like_proteins


id: SM00533
description: DNA-binding domain of DNA mismatch repair MUTS family
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00533
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM00533_DNA-binding_domain_of_DNA_mismatch_repair_MUTS_family


id: SM00534
description: ATPase domain of DNA mismatch repair MUTS family
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00534
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM00534_ATPase_domain_of_DNA_mismatch_repair_MUTS_family


id: SM00554
description: Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00554
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM00554_Four_repeated_domains_in_the_Fasciclin_I_family_of_proteins,_present_in_many_other_contexts.


id: SM00562
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00562
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM00562_These_are_enzymes_that_catalyze_nonsubstrate_specific_conversions_of_nucleoside_diphosphates_to_nucleoside_triphosphates._These_enzymes_play_important_roles_in_bacterial_growth,_signal_transduction_and_pathogenicity.

description:
  These are enzymes that catalyze nonsubstrate specific conversions of nucleoside diphosphates to nucleoside triphosphates. These enzymes play important roles in bacterial growth, signal transduction and pathogenicity.


id: SM00670
description: Large family of predicted nucleotide-binding domains
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00670
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM00670_Large_family_of_predicted_nucleotide-binding_domains


id: SM00729
description: Elongator protein 3, MiaB family, Radical SAM
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00729
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM00729_Elongator_protein_3,_MiaB_family,_Radical_SAM


id: SM00732
description: Likely ribonuclease with RNase H fold.
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00732
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM00732_Likely_ribonuclease_with_RNase_H_fold.


id: SM00738
description: In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00738
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM00738_In_Spt5p,_this_domain_may_confer_affinity_for_Spt4p._It_possesses_a_RNP-like_fold.


id: SM00739
description: KOW (Kyprides, Ouzounis, Woese) motif.
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00739
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM00739_KOW_(Kyprides,_Ouzounis,_Woese)_motif.


id: SM00758
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00758
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM00758_Domain_in_bacterial_beta-glucosidases_other_glycosidases,_glycosyltransferases,_proteases,_amidases,_yeast_adhesins,_and_bacterial_toxins.

description:
  Domain in bacterial beta-glucosidases other glycosidases, glycosyltransferases, proteases, amidases, yeast adhesins, and bacterial toxins.


id: SM00760
description: Bacterial dnaA protein helix-turn-helix domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00760
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM00760_Bacterial_dnaA_protein_helix-turn-helix_domain


id: SM00813
description: Alpha-L-arabinofuranosidase C-terminus
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00813
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM00813_Alpha-L-arabinofuranosidase_C-terminus


id: SM00839
description: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00839
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM00839_Glutamate/Leucine/Phenylalanine/Valine_dehydrogenase


id: SM00840
description: This DALR domain is found in cysteinyl-tRNA-synthetases.
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00840
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM00840_This_DALR_domain_is_found_in_cysteinyl-tRNA-synthetases.


id: SM00843
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00843
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM00843_This_domain_directs_oriented_DNA_translocation_and_forms_a_winged_helix_structure._Mutated_proteins_with_substitutions_in_the_FtsK_gamma_DNA-recognition_helix_are_impaired_in_DNA_binding.

description:
  This domain directs oriented DNA translocation and forms a winged helix structure. Mutated proteins with substitutions in the FtsK gamma DNA-recognition helix are impaired in DNA binding.


id: SM00846
description: Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00846
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM00846_Glyceraldehyde_3-phosphate_dehydrogenase,_NAD_binding_domain


id: SM00858
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00858
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM00858_This_domain_family_includes_a_range_of_different_proteins._Such_as_antifreeze_proteins_and_flagellar_FlgA_proteins,_and_CpaB_pilus_proteins.

description:
  This domain family includes a range of different proteins. Such as antifreeze proteins and flagellar FlgA proteins, and CpaB pilus proteins.


id: SM00859
description: Semialdehyde dehydrogenase, NAD binding domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00859
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM00859_Semialdehyde_dehydrogenase,_NAD_binding_domain


id: SM00861
description: Transketolase, pyrimidine binding domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00861
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM00861_Transketolase,_pyrimidine_binding_domain


id: SM00862
description: Transcriptional regulatory protein, C terminal
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00862
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM00862_Transcriptional_regulatory_protein,_C_terminal


id: SM00863
description: Threonyl and Alanyl tRNA synthetase second additional domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00863
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM00863_Threonyl_and_Alanyl_tRNA_synthetase_second_additional_domain


id: SM00865
description: Tubulin/FtsZ family, C-terminal domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00865
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM00865_Tubulin/FtsZ_family,_C-terminal_domain


id: SM00866
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00866
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM00866_The_UbiC_transcription_regulator-associated_(UTRA)_domain_is_a_conserved_ligand-binding_domain_that_has_a_similar_fold_to_PUBMED:12757941._It_is_believed_to_modulate_activity_of_bacterial_transcription_factors_in_response_to_binding_small_molecules.

description:
  The UbiC transcription regulator-associated (UTRA) domain is a conserved ligand-binding domain that has a similar fold to PUBMED:12757941. It is believed to modulate activity of bacterial transcription factors in response to binding small molecules.


id: SM00870
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00870
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM00870_Asparaginase,_which_is_found_in_various_plant,_animal_and_bacterial_cells,_catalyses_the_deamination_of_asparagine_to_yield_aspartic_acid_and_an_ammonium_ion,_resulting_in_a_depletion_of_free_circulatory_asparagine_in_plasma_PUBMED:3026924._The_...

description:
  Asparaginase, which is found in various plant, animal and bacterial cells, catalyses the deamination of asparagine to yield aspartic acid and an ammonium ion, resulting in a depletion of free circulatory asparagine in plasma PUBMED:3026924. The ...


id: SM00876
description: Biotin and Thiamin Synthesis associated domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00876
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM00876_Biotin_and_Thiamin_Synthesis_associated_domain


id: SM00896
description: Ferredoxin-fold anticodon binding domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00896
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM00896_Ferredoxin-fold_anticodon_binding_domain


id: SM00899
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00899
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM00899_This_entry_represents_the_core_domain_of_the_ferrous_iron_(Fe2+)_transport_protein_FeoA_found_in_bacteria._This_domain_also_occurs_at_the_C-terminus_in_related_proteins._The_transporter_Feo_is_composed_of_three_proteins:_FeoA_a_small,_soluble_...

description:
  This entry represents the core domain of the ferrous iron (Fe2+) transport protein FeoA found in bacteria. This domain also occurs at the C-terminus in related proteins. The transporter Feo is composed of three proteins: FeoA a small, soluble ...


id: SM00922
description: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00922
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM00922_Mandelate_racemase_/_muconate_lactonizing_enzyme,_C-terminal_domain


id: SM00926
description: Molybdopterin oxidoreductase Fe4S4 domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00926
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM00926_Molybdopterin_oxidoreductase_Fe4S4_domain


id: SM00928
description: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00928
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM00928_NADH-ubiquinone_oxidoreductase-F_iron-sulfur_binding_region


id: SM00929
description: NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00929
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM00929_NADH-ubiquinone_oxidoreductase-G_iron-sulfur_binding_region


id: SM00930
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00930
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM00930_This_domain_is_found_at_the_C-terminus_of_ABC_transporter_proteins_involved_in_D-methionine_transport_as_well_as_a_number_of_ferredoxin-like_proteins._This_domain_is_likely_to_act_as_a_substrate_binding_domain._The_domain_has_been_named_after_a_...

description:
  This domain is found at the C-terminus of ABC transporter proteins involved in D-methionine transport as well as a number of ferredoxin-like proteins. This domain is likely to act as a substrate binding domain. The domain has been named after a ...


id: SM00934
description: Orotidine 5-phosphate decarboxylase / HUMPS family
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00934
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM00934_Orotidine_5-phosphate_decarboxylase_/_HUMPS_family


id: SM00937
description: This domain is found in peptide chain release factors.
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00937
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM00937_This_domain_is_found_in_peptide_chain_release_factors.


id: SM00939
description: X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00939
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM00939_X-Pro_dipeptidyl-peptidase_C-terminal_non-catalytic_domain


id: SM00953
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00953
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM00953_This_presumed_protein_contains_3_highly_conserved_polar_groups_that_could_form_an_active_site._These_are_an_arginine,_glutamate_and_serine,_hence_the_RES_domain._RES_is_found_widely_distributed_in_bacteria,_it_has_about_150_residues_in_length.

description:
  This presumed protein contains 3 highly conserved polar groups that could form an active site. These are an arginine, glutamate and serine, hence the RES domain. RES is found widely distributed in bacteria, it has about 150 residues in length.


id: SM00955
description: This domain is the catalytic domain of ribonuclease II.PUBMED:16806266
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00955
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM00955_This_domain_is_the_catalytic_domain_of_ribonuclease_II.PUBMED:16806266


id: SM00956
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00956
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM00956_This_DNA-binding_domain_is_found_in_the_RecQ_helicase_among_others_and_has_a_helix-turn-helix_structure._The_RQC_domain,_found_only_in_RecQ_family_enzymes,_is_a_high_affinity_G4_DNA_binding_domain_PUBMED:16530788.

description:
  This DNA-binding domain is found in the RecQ helicase among others and has a helix-turn-helix structure. The RQC domain, found only in RecQ family enzymes, is a high affinity G4 DNA binding domain PUBMED:16530788.


id: SM00959
description: Rho termination factor, N-terminal domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00959
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM00959_Rho_termination_factor,_N-terminal_domain


id: SM00963
description: SRP54-type protein, helical bundle domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00963
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM00963_SRP54-type_protein,_helical_bundle_domain


id: SM00965
description: Secretin and TonB N terminus short domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00965
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM00965_Secretin_and_TonB_N_terminus_short_domain


id: SM00967
description: RNA 2-O ribose methyltransferase substrate binding
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00967
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM00967_RNA_2-O_ribose_methyltransferase_substrate_binding


id: SM00981
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00981
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM00981_The_THUMP_domain_is_named_after_after_thiouridine_synthases,_methylases_and_PSUSs_PUBMED:11295541._The_THUMP_domain_consists_of_about_110_amino_acid_residues._The_structure_of_ThiI_reveals_that_the_THUMP_has_a_fold_unlike_that_of_previously_...

description:
  The THUMP domain is named after after thiouridine synthases, methylases and PSUSs PUBMED:11295541. The THUMP domain consists of about 110 amino acid residues. The structure of ThiI reveals that the THUMP has a fold unlike that of previously ...


id: SM00982
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00982
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM00982_This_domain_is_found_in_proteins_necessary_for_strand-specific_repair_in_DNA_such_as_TRCF_in_Escherichia_coli._A_lesion_in_the_template_strand_blocks_the_RNA_polymerase_complex_(RNAP)._The_RNAP-DNA-RNA_complex_is_specifically_recognised_by_the_...

description:
  This domain is found in proteins necessary for strand-specific repair in DNA such as TRCF in Escherichia coli. A lesion in the template strand blocks the RNA polymerase complex (RNAP). The RNAP-DNA-RNA complex is specifically recognised by the ...


id: SM00987
description: UreE urease accessory protein, C-terminal domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00987
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM00987_UreE_urease_accessory_protein,_C-terminal_domain


id: SM00997
description: S-adenosyl-L-homocysteine hydrolase, NAD binding domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00997
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM00997_S-adenosyl-L-homocysteine_hydrolase,_NAD_binding_domain


id: SM01002
description: Alanine dehydrogenase/PNT, C-terminal domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01002
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM01002_Alanine_dehydrogenase/PNT,_C-terminal_domain


id: SM01003
description: Alanine dehydrogenase/PNT, N-terminal domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01003
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM01003_Alanine_dehydrogenase/PNT,_N-terminal_domain


id: SM01007
description: Class II Aldolase and Adducin N-terminal domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01007
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM01007_Class_II_Aldolase_and_Adducin_N-terminal_domain


id: SM01008
description: Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01008
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM01008_Aldehyde_oxidase_and_xanthine_dehydrogenase,_a/b_hammerhead_domain


id: SM01016
description: Arginyl tRNA synthetase N terminal dom
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01016
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM01016_Arginyl_tRNA_synthetase_N_terminal_dom


id: SM01060
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01060
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM01060_Catalases_are_antioxidant_enzymes_that_catalyse_the_conversion_of_hydrogen_peroxide_to_water_and_molecular_oxygen,_serving_to_protect_cells_from_its_toxic_effects_PUBMED:11351128._Hydrogen_peroxide_is_produced_as_a_consequence_of_oxidative_cellular_...

description:
  Catalases are antioxidant enzymes that catalyse the conversion of hydrogen peroxide to water and molecular oxygen, serving to protect cells from its toxic effects PUBMED:11351128. Hydrogen peroxide is produced as a consequence of oxidative cellular ...


id: SM01086
description: C-terminal, D2-small domain, of ClpB protein
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01086
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM01086_C-terminal,_D2-small_domain,_of_ClpB_protein


id: SM01092
description: CO dehydrogenase flavoprotein C-terminal domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01092
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM01092_CO_dehydrogenase_flavoprotein_C-terminal_domain


id: SM01096
description: Carbamoyl-phosphate synthetase large chain, oligomerisation domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01096
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM01096_Carbamoyl-phosphate_synthetase_large_chain,_oligomerisation_domain


id: SM01097
description: Carbamoyl-phosphate synthase small chain, CPSase domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01097
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM01097_Carbamoyl-phosphate_synthase_small_chain,_CPSase_domain


id: SM01117
description: Cytochrome b5-like Heme/Steroid binding domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01117
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM01117_Cytochrome_b5-like_Heme/Steroid_binding_domain


id: SM01149
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01149
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM01149_This_family_contains_a_number_of_hypothetical_proteins_of_about_450_residues_in_length._Their_function_is_unknown,_and_most_are_bacterial._However,_structurally_this_family_is_part_of_the_6_hairpin_glycosidase_superfamily,_suggesting_a_glycosyl_...

description:
  This family contains a number of hypothetical proteins of about 450 residues in length. Their function is unknown, and most are bacterial. However, structurally this family is part of the 6 hairpin glycosidase superfamily, suggesting a glycosyl ...


id: SM01150
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01150
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM01150_This_domain_is_found_in_a_variety_of_bacterial_and_fungal_hypothetical_proteins_of_unknown_function._The_structure_of_this_domain_has_been_solved_by_structural_genomics._The_structure_implies_a_zinc-binding_function,_so_it_is_a_putative_metal_...

description:
  This domain is found in a variety of bacterial and fungal hypothetical proteins of unknown function. The structure of this domain has been solved by structural genomics. The structure implies a zinc-binding function, so it is a putative metal ...


id: SM01209
description: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01209
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM01209_Phosphoribosylglycinamide_synthetase,_ATP-grasp_(A)_domain


id: SM01210
description: Phosphoribosylglycinamide synthetase, C domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01210
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM01210_Phosphoribosylglycinamide_synthetase,_C_domain


id: SM01211
description: CobB/CobQ-like glutamine amidotransferase domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01211
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM01211_CobB/CobQ-like_glutamine_amidotransferase_domain


id: SM01230
description: Glutamine synthetase, catalytic domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01230
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM01230_Glutamine_synthetase,_catalytic_domain


id: SM01248
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01248
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM01248_The_cyanobacterial_clock_proteins_KaiA_and_KaiB_are_proposed_as_regulators_of_the_circadian_rhythm_in_cyanobacteria._Mutations_in_both_proteins_have_been_reported_to_alter_or_abolish_circadian_rhythmicity._KaiB_adopts_an_alpha-beta_meander_motif_and_...

description:
  The cyanobacterial clock proteins KaiA and KaiB are proposed as regulators of the circadian rhythm in cyanobacteria. Mutations in both proteins have been reported to alter or abolish circadian rhythmicity. KaiB adopts an alpha-beta meander motif and ...


id: SM01252
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01252
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM01252_Conserved_DNA-binding_domain_that_is_found_in_a_wide_range_of_proteins_of_large_bacterial_and_eukaryotic_DNA_viruses.

description:
  Conserved DNA-binding domain that is found in a wide range of proteins of large bacterial and eukaryotic DNA viruses.


id: SM01329
description: Isocitrate/isopropylmalate dehydrogenase
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01329
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM01329_Isocitrate/isopropylmalate_dehydrogenase


id: SM01340
description: DNA mismatch repair protein, C-terminal domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01340
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM01340_DNA_mismatch_repair_protein,_C-terminal_domain


id: SM01350
description: 6-phosphogluconate dehydrogenase, C-terminal domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01350
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM01350_6-phosphogluconate_dehydrogenase,_C-terminal_domain


id: SM01382
description: Ribosomal Proteins L2, C-terminal domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01382
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM01382_Ribosomal_Proteins_L2,_C-terminal_domain


id: SM01383
description: Ribosomal Proteins L2, RNA binding domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01383
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM01383_Ribosomal_Proteins_L2,_RNA_binding_domain


id: SM01390
description: Ribosomal protein S4/S9 N-terminal domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01390
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM01390_Ribosomal_protein_S4/S9_N-terminal_domain


id: SM01400
description: N-terminal domain of ribose phosphate pyrophosphokinase
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01400
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM01400_N-terminal_domain_of_ribose_phosphate_pyrophosphokinase


id: SM01419
description: Alpha-macro-globulin thiol-ester bond-forming region
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01419
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM01419_Alpha-macro-globulin_thiol-ester_bond-forming_region


id: SM01432
description: PD-(D/E)XK nuclease transposase sub-family
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01432
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM01432_PD-(D/E)XK_nuclease_transposase_sub-family


id: SM01437
description: Serine recombinase conjugative transposon sub-family
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01437
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM01437_Serine_recombinase_conjugative_transposon_sub-family


id: SM01477
description: DDE transposase retroviral integrase sub-family
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01477
name:
  Protein Domains (SMART).STRING_v12.0_1434752_STRINGid_SM01477_DDE_transposase_retroviral_integrase_sub-family


