# geneInfo

ensembl_gene_id: AAY24_00015
symbol: AKH18998.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_00020
symbol: AKH18999.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: AAY24_00045
symbol: msrA
gene_biotype: protein_coding
description:
  Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.


ensembl_gene_id: AAY24_00050
symbol: AKH19004.1
gene_biotype: protein_coding
description:
  Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_00055
symbol: AKH19005.1
gene_biotype: protein_coding
description:
  Ferric reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_00065
symbol: AKH19007.1
gene_biotype: protein_coding
description:
  Signal transduction protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_00075
symbol: AKH19008.1
gene_biotype: protein_coding
description:
  Riboflavin synthase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_00080
symbol: AKH19009.1
gene_biotype: protein_coding
description:
  LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: AAY24_00105
symbol: mrcB
gene_biotype: protein_coding
description:
  Penicillin-binding protein; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits).


ensembl_gene_id: AAY24_00120
symbol: AKH19014.1
gene_biotype: protein_coding
description:
  Helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_00125
symbol: AKH19015.1
gene_biotype: protein_coding
description:
  Glycoprotease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_00130
symbol: AKH19016.1
gene_biotype: protein_coding
description:
  Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_00155
symbol: AKH19021.1
gene_biotype: protein_coding
description:
  Threonine transporter RhtB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_00170
symbol: AKH19023.1
gene_biotype: protein_coding
description:
  Nitrite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_00180
symbol: AKH19025.1
gene_biotype: protein_coding
description:
  ModE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_00185
symbol: AKH21947.1
gene_biotype: protein_coding
description:
  C4-dicarboxylate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_00190
symbol: AKH19026.1
gene_biotype: protein_coding
description:
  C4-dicarboxylate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_00200
symbol: AKH19028.1
gene_biotype: protein_coding
description:
  5-oxoprolinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_00215
symbol: hypA
gene_biotype: protein_coding
description:
  Hydrogenase nickel incorporation protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.


ensembl_gene_id: AAY24_00220
symbol: hypB
gene_biotype: protein_coding
description:
  Hydrogenase nickel incorporation protein HypB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_00230
symbol: hypD
gene_biotype: protein_coding
description:
  Hydrogenase formation protein HupD; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HypD family.


ensembl_gene_id: AAY24_00235
symbol: hypE
gene_biotype: protein_coding
description:
  Hydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_00240
symbol: AKH19034.1
gene_biotype: protein_coding
description:
  Hydrogenase maturation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_00245
symbol: AKH19035.1
gene_biotype: protein_coding
description:
  Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_00250
symbol: AKH21950.1
gene_biotype: protein_coding
description:
  Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_00255
symbol: AKH19036.1
gene_biotype: protein_coding
description:
  HupU protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_00260
symbol: AKH19037.1
gene_biotype: protein_coding
description:
  HupV protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_00340
symbol: AKH19047.1
gene_biotype: protein_coding
description:
  ArsR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_00345
symbol: AKH19048.1
gene_biotype: protein_coding
description:
  Methionine gamma-lyase; Catalyzes the formation of methanethiol and 2-ocobutanoate from L-methionine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_00355
symbol: AKH19050.1
gene_biotype: protein_coding
description:
  EBNA-1 nuclear protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_00360
symbol: AKH19051.1
gene_biotype: protein_coding
description:
  Mandelate racemase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_00365
symbol: AKH19052.1
gene_biotype: protein_coding
description:
  Catalyzes the transamination of D-amino acids and their alpha-keto acids; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_00370
symbol: ureG
gene_biotype: protein_coding
description:
  Urease accessory protein UreG; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SIMIBI class G3E GTPase family. UreG subfamily.


ensembl_gene_id: AAY24_00375
symbol: AKH21954.1
gene_biotype: protein_coding
description:
  Urease accessory protein UreF; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_00380
symbol: AKH19054.1
gene_biotype: protein_coding
description:
  Urease accessory protein UreE; Involved in the assembly of the urease metallocenter; possible nickel donor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_00385
symbol: ureC
gene_biotype: protein_coding
description:
  Urease subunit alpha; Ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_00390
symbol: ureA
gene_biotype: protein_coding
description:
  Urease subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the urease beta subunit family.


ensembl_gene_id: AAY24_00400
symbol: urtE
gene_biotype: protein_coding
description:
  Urea ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_00410
symbol: urtC
gene_biotype: protein_coding
description:
  Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: AAY24_00420
symbol: urtA
gene_biotype: protein_coding
description:
  Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_00435
symbol: AKH21955.1
gene_biotype: protein_coding
description:
  MerR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_00440
symbol: AKH19065.1
gene_biotype: protein_coding
description:
  Cation transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_00520
symbol: htpX
gene_biotype: protein_coding
description:
  Heat shock protein HtpX; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase M48B family.


ensembl_gene_id: AAY24_00530
symbol: AKH21957.1
gene_biotype: protein_coding
description:
  Cobyric acid synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_00535
symbol: AKH19080.1
gene_biotype: protein_coding
description:
  Cysteine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_00540
symbol: thiC
gene_biotype: protein_coding
description:
  Thiamine biosynthesis protein ThiC; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction.


ensembl_gene_id: AAY24_00550
symbol: thiG
gene_biotype: protein_coding
description:
  Thiazole synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.


ensembl_gene_id: AAY24_00555
symbol: thiH
gene_biotype: protein_coding
description:
  In Escherichia coli this enzyme functions in thiamine biosynthesis along with thiFSGI and iscS; with ThiFSG catalyzes the formation of thiazole phosphate from tyrosine, cysteine and 1-deoxy-D-xylulose-5-phosphate; forms a complex with ThiG; contains an iron-sulfur center; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_00565
symbol: AKH19086.1
gene_biotype: protein_coding
description:
  Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_00570
symbol: AKH19087.1
gene_biotype: protein_coding
description:
  RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_00590
symbol: AKH19090.1
gene_biotype: protein_coding
description:
  SpoVR family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_00595
symbol: AKH19091.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0229 family.


ensembl_gene_id: AAY24_00600
symbol: AKH19092.1
gene_biotype: protein_coding
description:
  Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_00605
symbol: mazG
gene_biotype: protein_coding
description:
  Nucleoside triphosphate hydrolase; Functions in degradation of stringent response intracellular messenger ppGpp; in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF; activity of MazG is inhibited by MazEF in vitro; ppGpp inhibits mazEF expression; MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation; MazG also interacts with the GTPase protein Era; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_00610
symbol: AKH19094.1
gene_biotype: protein_coding
description:
  Peptidase M48; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_00620
symbol: AKH19096.1
gene_biotype: protein_coding
description:
  Peptidase S41; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S41A family.


ensembl_gene_id: AAY24_00625
symbol: AKH21958.1
gene_biotype: protein_coding
description:
  Peptidase S11; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S11 family.


ensembl_gene_id: AAY24_00630
symbol: gshA
gene_biotype: protein_coding
description:
  Glutamate--cysteine ligase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily.


ensembl_gene_id: AAY24_00635
symbol: AKH19097.1
gene_biotype: protein_coding
description:
  Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_00640
symbol: pomA
gene_biotype: protein_coding
description:
  Flagellar motor protein PomA; Homologous to MotA in E. coli and Salmonella. With PomB forms the ion channels that couple flagellar rotation to sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_00645
symbol: AKH19098.1
gene_biotype: protein_coding
description:
  Flagellar motor protein MotB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_00660
symbol: nth
gene_biotype: protein_coding
description:
  Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.


ensembl_gene_id: AAY24_00670
symbol: AKH21962.1
gene_biotype: protein_coding
description:
  MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_00675
symbol: AKH19102.1
gene_biotype: protein_coding
description:
  Asparagine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_00680
symbol: ngg
gene_biotype: protein_coding
description:
  GNAT family acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_00685
symbol: AKH19104.1
gene_biotype: protein_coding
description:
  Peptidase M42; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_00700
symbol: AKH19106.1
gene_biotype: protein_coding
description:
  Radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_00705
symbol: AKH19107.1
gene_biotype: protein_coding
description:
  Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_00720
symbol: AKH19110.1
gene_biotype: protein_coding
description:
  4-hydroxybutyrate CoA-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_00725
symbol: AKH19111.1
gene_biotype: protein_coding
description:
  Hydrogenase 2 small subunit; Involved in hydrogen uptake; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_00730
symbol: hybA
gene_biotype: protein_coding
description:
  Hydrogenase 2 protein HybA; Fe-S ferrodoxin type component; participates in the periplasmic electron-transferring activity of hydrogenase 2; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_00740
symbol: AKH19114.1
gene_biotype: protein_coding
description:
  Hydrogenase 2 large subunit; Involved in hydrogen uptake; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.


ensembl_gene_id: AAY24_00780
symbol: AKH19120.1
gene_biotype: protein_coding
description:
  Glycine/betaine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_00785
symbol: proX
gene_biotype: protein_coding
description:
  Glycine/betaine ABC transporter substrate-binding protein; With ProVW, part of the high-affinity transport system for the osmoprotectant glycine betaine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_00790
symbol: AKH19122.1
gene_biotype: protein_coding
description:
  Tetrathionate reductase subunit A; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_00800
symbol: AKH21964.1
gene_biotype: protein_coding
description:
  Tetrathionate reductase subunit B; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_00825
symbol: AKH21966.1
gene_biotype: protein_coding
description:
  Deoxyribodipyrimidine photolyase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_00830
symbol: AKH21967.1
gene_biotype: protein_coding
description:
  Anion transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_00845
symbol: recQ
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase RecQ; Functions in blocking illegitimate recombination, enhancing topoisomerase activity, initiating SOS signaling and clearing blocked replication forks; component of the RecF recombinational pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_00890
symbol: AKH19136.1
gene_biotype: protein_coding
description:
  Cobalt ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_00895
symbol: AKH19137.1
gene_biotype: protein_coding
description:
  Cobalt ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_00905
symbol: AKH19139.1
gene_biotype: protein_coding
description:
  Cobalamin biosynthesis protein CbiM; Catalyzes the ATP-dependent transport of cobalt; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_00910
symbol: AKH19140.1
gene_biotype: protein_coding
description:
  ATP-dependent DNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_00915
symbol: nikR
gene_biotype: protein_coding
description:
  Nickel responsive regulator; Transcriptional regulator; Belongs to the transcriptional regulatory CopG/NikR family.


ensembl_gene_id: AAY24_00920
symbol: AKH19142.1
gene_biotype: protein_coding
description:
  Permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_00925
symbol: AKH19143.1
gene_biotype: protein_coding
description:
  Quercetin 2,3-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_00950
symbol: AKH19147.1
gene_biotype: protein_coding
description:
  N-ethylmaleimide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_00955
symbol: panP
gene_biotype: protein_coding
description:
  Glutamate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_00965
symbol: AKH21969.1
gene_biotype: protein_coding
description:
  Aldo/keto reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_00970
symbol: AKH21970.1
gene_biotype: protein_coding
description:
  MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_00975
symbol: AKH19149.1
gene_biotype: protein_coding
description:
  Cyclopropane fatty acyl phospholipid synthase; Catalyzes the transfer of a methylene group from S-adenosyl-L-methionine to the cis double bond of an unsaturated fatty acid chain resulting in the replacement of the double bond with a methylene bridge; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_00980
symbol: AKH19150.1
gene_biotype: protein_coding
description:
  D-fructose-6-phosphate amidotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_00985
symbol: AKH19151.1
gene_biotype: protein_coding
description:
  Carbonic anhydrase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_00990
symbol: AKH19152.1
gene_biotype: protein_coding
description:
  Malate synthase; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA.


ensembl_gene_id: AAY24_01000
symbol: AKH19154.1
gene_biotype: protein_coding
description:
  Threonine transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_01005
symbol: AKH19155.1
gene_biotype: protein_coding
description:
  Multidrug DMT transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_01015
symbol: AKH19157.1
gene_biotype: protein_coding
description:
  ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_01025
symbol: AKH19159.1
gene_biotype: protein_coding
description:
  Methionine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_01030
symbol: AKH21971.1
gene_biotype: protein_coding
description:
  ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_01055
symbol: AKH19164.1
gene_biotype: protein_coding
description:
  Epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_01060
symbol: AKH19165.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: AAY24_01075
symbol: AKH19168.1
gene_biotype: protein_coding
description:
  Amino acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_01080
symbol: AKH19169.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: AAY24_01100
symbol: lpdA
gene_biotype: protein_coding
description:
  Dihydrolipoamide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_01105
symbol: aceF
gene_biotype: protein_coding
description:
  Branched-chain alpha-keto acid dehydrogenase subunit E2; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).


ensembl_gene_id: AAY24_01110
symbol: aceE
gene_biotype: protein_coding
description:
  Pyruvate dehydrogenase; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).


ensembl_gene_id: AAY24_01135
symbol: AKH19177.1
gene_biotype: protein_coding
description:
  Acriflavine resistance protein B; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: AAY24_01140
symbol: AKH19178.1
gene_biotype: protein_coding
description:
  Exonuclease SbcD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_01175
symbol: AKH19184.1
gene_biotype: protein_coding
description:
  Amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_01190
symbol: AKH21974.1
gene_biotype: protein_coding
description:
  Lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_01195
symbol: AKH19186.1
gene_biotype: protein_coding
description:
  Rubrerythrin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_01200
symbol: AKH19187.1
gene_biotype: protein_coding
description:
  Fe-S oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_01205
symbol: AKH19188.1
gene_biotype: protein_coding
description:
  Ferritin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_01215
symbol: AKH19189.1
gene_biotype: protein_coding
description:
  Divalent cation transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_01240
symbol: AKH19192.1
gene_biotype: protein_coding
description:
  Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_01245
symbol: AKH19193.1
gene_biotype: protein_coding
description:
  RNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_01280
symbol: AKH19196.1
gene_biotype: protein_coding
description:
  Sulfur oxidation protein SoxY; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_01290
symbol: AKH19198.1
gene_biotype: protein_coding
description:
  Potassium transporter TrkA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_01295
symbol: AKH19199.1
gene_biotype: protein_coding
description:
  Sulfate permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_01300
symbol: AKH19200.1
gene_biotype: protein_coding
description:
  Lipo-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_01310
symbol: AKH19202.1
gene_biotype: protein_coding
description:
  Acetate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_01315
symbol: AKH21981.1
gene_biotype: protein_coding
description:
  Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.


ensembl_gene_id: AAY24_01320
symbol: fhs
gene_biotype: protein_coding
description:
  Formate--tetrahydrofolate ligase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the formate--tetrahydrofolate ligase family.


ensembl_gene_id: AAY24_01325
symbol: AKH19204.1
gene_biotype: protein_coding
description:
  Sodium:hydrogen antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_01355
symbol: AKH19210.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the small heat shock protein (HSP20) family.


ensembl_gene_id: AAY24_01375
symbol: AKH19214.1
gene_biotype: protein_coding
description:
  Aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_01425
symbol: AKH19224.1
gene_biotype: protein_coding
description:
  Molybdate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_01450
symbol: AKH19226.1
gene_biotype: protein_coding
description:
  Branched-chain alpha-keto acid dehydrogenase subunit E2; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_01455
symbol: AKH19227.1
gene_biotype: protein_coding
description:
  2-oxoisovalerate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_01460
symbol: pdhA
gene_biotype: protein_coding
description:
  Pyruvate dehydrogenase; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3).


ensembl_gene_id: AAY24_01475
symbol: AKH19231.1
gene_biotype: protein_coding
description:
  Acriflavin resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: AAY24_01490
symbol: ccoN
gene_biotype: protein_coding
description:
  Cytochrome oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heme-copper respiratory oxidase family.


ensembl_gene_id: AAY24_01495
symbol: ccoO
gene_biotype: protein_coding
description:
  Cytochrome oxidase subunit II; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_01500
symbol: AKH19235.1
gene_biotype: protein_coding
description:
  Cbb3-type cytochrome oxidase component FixQ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_01510
symbol: ccoG
gene_biotype: protein_coding
description:
  4Fe-4S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_01520
symbol: cadA
gene_biotype: protein_coding
description:
  ATPase P; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_01550
symbol: cyoE
gene_biotype: protein_coding
description:
  Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.


ensembl_gene_id: AAY24_01570
symbol: AKH19247.1
gene_biotype: protein_coding
description:
  Formate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: AAY24_01575
symbol: AKH19248.1
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit F; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_01585
symbol: AKH19249.1
gene_biotype: protein_coding
description:
  Selenium-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_01590
symbol: AKH21985.1
gene_biotype: protein_coding
description:
  Photosynthetic protein synthase I; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_01600
symbol: AKH19251.1
gene_biotype: protein_coding
description:
  Glycine cleavage system protein H; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_01610
symbol: AKH19253.1
gene_biotype: protein_coding
description:
  OsmC family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_01630
symbol: fhcD
gene_biotype: protein_coding
description:
  Formylmethanofuran--tetrahydromethanopterin formyltransferase; Catalyzes the transfer of a formyl group from 5-formyl tetrahydromethanopterin (5-formyl-H(4)MPT) to methanofuran (MFR) so as to produce formylmethanofuran (formyl-MFR) and tetrahydromethanopterin (H(4)MPT); Belongs to the FTR family.


ensembl_gene_id: AAY24_01640
symbol: AKH19257.1
gene_biotype: protein_coding
description:
  Methylenetetrahydromethanopterin dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_01650
symbol: mch
gene_biotype: protein_coding
description:
  N(5),N(10)-methenyltetrahydromethanopterin cyclohydrolase; Catalyzes the hydrolysis of methenyl-H(4)MPT(+) to 5-formyl- H(4)MPT; Belongs to the MCH family.


ensembl_gene_id: AAY24_01655
symbol: AKH19260.1
gene_biotype: protein_coding
description:
  alpha-L-glutamate ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_01665
symbol: fae
gene_biotype: protein_coding
description:
  Aldehyde-activating protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_01690
symbol: pabB
gene_biotype: protein_coding
description:
  Para-aminobenzoate synthase component 1; catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and L-glutamine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_01710
symbol: AKH19268.1
gene_biotype: protein_coding
description:
  Tetrahydromethanopterin synthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_01715
symbol: AKH19269.1
gene_biotype: protein_coding
description:
  Formylmethanofuran dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_01725
symbol: AKH19271.1
gene_biotype: protein_coding
description:
  Dihydropteroate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_01730
symbol: AKH19272.1
gene_biotype: protein_coding
description:
  Flavoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_01760
symbol: AKH19278.1
gene_biotype: protein_coding
description:
  Macrolide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_01835
symbol: ctaD
gene_biotype: protein_coding
description:
  Cytochrome oxidase subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.


ensembl_gene_id: AAY24_01840
symbol: coxB
gene_biotype: protein_coding
description:
  Cytochrome oxidase; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).


ensembl_gene_id: AAY24_01850
symbol: AKH19294.1
gene_biotype: protein_coding
description:
  LL-diaminopimelate aminotransferase; Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL- diaminopimelate; Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family. LL-diaminopimelate aminotransferase subfamily.


ensembl_gene_id: AAY24_01855
symbol: lysA
gene_biotype: protein_coding
description:
  Diaminopimelate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_01860
symbol: uppP
gene_biotype: protein_coding
description:
  UDP pyrophosphate phosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.


ensembl_gene_id: AAY24_01865
symbol: cpsB
gene_biotype: protein_coding
description:
  Mannose-1-phosphate guanyltransferase; Capsular polysaccharide colanic acid biosynthesis protein; catalyzes the formation of GDP-mannose from GTP and alpha-D-mannose 1-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the mannose-6-phosphate isomerase type 2 family.


ensembl_gene_id: AAY24_01880
symbol: glnD
gene_biotype: protein_coding
description:
  protein-PII uridylyltransferase; Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen metabolism.


ensembl_gene_id: AAY24_01885
symbol: map
gene_biotype: protein_coding
description:
  Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.


ensembl_gene_id: AAY24_01890
symbol: rpsB
gene_biotype: protein_coding
description:
  30S ribosomal protein S2; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS2 family.


ensembl_gene_id: AAY24_01895
symbol: tsf
gene_biotype: protein_coding
description:
  Elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.


ensembl_gene_id: AAY24_01905
symbol: frr
gene_biotype: protein_coding
description:
  Ribosome-recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.


ensembl_gene_id: AAY24_01910
symbol: uppS
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with (2E,6E)-farnesyl diphosphate (E,E-FPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30Z,34E,38E)-undecaprenyl diphosphate (di- trans,octa-cis-UPP). UPP is the precursor of glycosyl carrier lipid in the biosynthesis of bacterial cell wall polysaccharide components such as peptidoglycan and lipopolysaccharide.


ensembl_gene_id: AAY24_01920
symbol: dxr
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family.


ensembl_gene_id: AAY24_01925
symbol: AKH19308.1
gene_biotype: protein_coding
description:
  Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_01930
symbol: bamA
gene_biotype: protein_coding
description:
  Membrane protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.


ensembl_gene_id: AAY24_01935
symbol: AKH19310.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the skp family.


ensembl_gene_id: AAY24_01940
symbol: AKH21991.1
gene_biotype: protein_coding
description:
  UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_01945
symbol: fabZ
gene_biotype: protein_coding
description:
  3-hydroxyacyl-ACP dehydratase; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.


ensembl_gene_id: AAY24_01950
symbol: lpxA
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: AAY24_01955
symbol: lpxB
gene_biotype: protein_coding
description:
  lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: AAY24_01965
symbol: dnaE
gene_biotype: protein_coding
description:
  DNA polymerase III subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_01970
symbol: accA
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.


ensembl_gene_id: AAY24_01985
symbol: prfB
gene_biotype: protein_coding
description:
  Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.


ensembl_gene_id: AAY24_01990
symbol: lysS
gene_biotype: protein_coding
description:
  lysyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II aminoacyl-tRNA synthetase family.


ensembl_gene_id: AAY24_02000
symbol: AKH19320.1
gene_biotype: protein_coding
description:
  Folate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_02005
symbol: AKH19321.1
gene_biotype: protein_coding
description:
  Exoribonuclease II; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_02025
symbol: AKH19325.1
gene_biotype: protein_coding
description:
  Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily.


ensembl_gene_id: AAY24_02035
symbol: AKH19326.1
gene_biotype: protein_coding
description:
  enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_02050
symbol: AKH19328.1
gene_biotype: protein_coding
description:
  beta-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.


ensembl_gene_id: AAY24_02065
symbol: AKH19330.1
gene_biotype: protein_coding
description:
  Cation tolerance protein CutA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_02070
symbol: thrH
gene_biotype: protein_coding
description:
  Phosphoserine phosphatase; Catalyzes the formation of serine from phosphoserine; also has phosphoserine:homoserine phosphotransferase activity; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_02080
symbol: AKH19333.1
gene_biotype: protein_coding
description:
  acetyl-CoA acetyltransferase; Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family.


ensembl_gene_id: AAY24_02085
symbol: AKH19334.1
gene_biotype: protein_coding
description:
  3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_02090
symbol: AKH19335.1
gene_biotype: protein_coding
description:
  acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_02110
symbol: AKH19339.1
gene_biotype: protein_coding
description:
  Electron transfer flavoprotein subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_02130
symbol: AKH19343.1
gene_biotype: protein_coding
description:
  Ubiquinone biosynthesis protein UbiH; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_02140
symbol: AKH19345.1
gene_biotype: protein_coding
description:
  AMP-dependent synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_02210
symbol: AKH19356.1
gene_biotype: protein_coding
description:
  Molecular chaperone; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_02235
symbol: AKH19361.1
gene_biotype: protein_coding
description:
  50S rRNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_02245
symbol: nfo
gene_biotype: protein_coding
description:
  Endonuclease IV; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin.


ensembl_gene_id: AAY24_02255
symbol: AKH21998.1
gene_biotype: protein_coding
description:
  Acetolactate synthase catalytic subunit; Catalyzes the formation of 2-acetolactate from pyruvate; also known as acetolactate synthase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_02285
symbol: AKH19367.1
gene_biotype: protein_coding
description:
  Sulfur acceptor protein CsdL; Accepts sulfur from CsdA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_02305
symbol: valS
gene_biotype: protein_coding
description:
  valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.


ensembl_gene_id: AAY24_02310
symbol: AKH19372.1
gene_biotype: protein_coding
description:
  Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.


ensembl_gene_id: AAY24_02320
symbol: pcnB
gene_biotype: protein_coding
description:
  poly(A) polymerase; Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control. Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.


ensembl_gene_id: AAY24_02325
symbol: AKH19374.1
gene_biotype: protein_coding
description:
  2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_02330
symbol: AKH19375.1
gene_biotype: protein_coding
description:
  Deoxyadenosine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_02335
symbol: panB
gene_biotype: protein_coding
description:
  3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family.


ensembl_gene_id: AAY24_02340
symbol: panC
gene_biotype: protein_coding
description:
  Pantoate--beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.


ensembl_gene_id: AAY24_02345
symbol: AKH19378.1
gene_biotype: protein_coding
description:
  Mechanosensitive ion channel protein MscS; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_02355
symbol: gabD
gene_biotype: protein_coding
description:
  Succinate-semialdehyde dehydrogenase; Catalyzes the formation of succinate from succinate semialdehyde; NADP dependent; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_02365
symbol: AKH19381.1
gene_biotype: protein_coding
description:
  Histone deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_02385
symbol: asnS
gene_biotype: protein_coding
description:
  asparaginyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_02395
symbol: AKH19387.1
gene_biotype: protein_coding
description:
  Glutaredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_02405
symbol: AKH19388.1
gene_biotype: protein_coding
description:
  RNA polymerase sigma70; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_02425
symbol: kbl
gene_biotype: protein_coding
description:
  2-amino-3-ketobutyrate CoA ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA.


ensembl_gene_id: AAY24_02430
symbol: tdh
gene_biotype: protein_coding
description:
  L-threonine 3-dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-threonine to 2- amino-3-ketobutyrate; Belongs to the zinc-containing alcohol dehydrogenase family.


ensembl_gene_id: AAY24_02435
symbol: msrP
gene_biotype: protein_coding
description:
  Sulfoxide reductase catalytic subunit YedY; Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to re [...]


ensembl_gene_id: AAY24_02455
symbol: AKH19396.1
gene_biotype: protein_coding
description:
  3-hydroxybutyryl-CoA dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_02460
symbol: AKH19397.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CoA-transferase III family.


ensembl_gene_id: AAY24_02470
symbol: AKH22002.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_02495
symbol: AKH19401.1
gene_biotype: protein_coding
description:
  ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_02510
symbol: AKH19403.1
gene_biotype: protein_coding
description:
  3-hydroxybutyryl-CoA dehydrogenase; Converts (S)-3-hydroxybutanoyl-CoA to 3-acetoacetyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_02515
symbol: icmF
gene_biotype: protein_coding
description:
  methylmalonyl-CoA mutase; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly.


ensembl_gene_id: AAY24_02525
symbol: AKH19406.1
gene_biotype: protein_coding
description:
  isovaleryl-CoA dehydrogenase; Catalyzes the formation of 3-methylbut-2-enoyl CoA from 3-methylbutanoyl CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_02540
symbol: AKH19409.1
gene_biotype: protein_coding
description:
  2-hydroxychromene-2-carboxylate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_02545
symbol: AKH19410.1
gene_biotype: protein_coding
description:
  methylcrotonoyl-CoA carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_02555
symbol: AKH19412.1
gene_biotype: protein_coding
description:
  3-methylcrotonyl-CoA carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_02560
symbol: AKH19413.1
gene_biotype: protein_coding
description:
  hydroxymethylglutaryl-CoA lyase; Catalyzes the formation of acetoacetate and acetyl-CoA from 3-hydroxy-3-methylglutaryl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_02565
symbol: AKH19414.1
gene_biotype: protein_coding
description:
  Alkylhydroperoxidase; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.


ensembl_gene_id: AAY24_02610
symbol: AKH19421.1
gene_biotype: protein_coding
description:
  XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_02620
symbol: AKH19423.1
gene_biotype: protein_coding
description:
  Lysophospholipase L1 biosynthesis ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_02675
symbol: AKH22009.1
gene_biotype: protein_coding
description:
  tRNA methyltransferase; Catalyzes the conversion of 5-hydroxyuridine to 5-methoxyuridine in tRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_02680
symbol: AKH19433.1
gene_biotype: protein_coding
description:
  tRNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_02685
symbol: AKH19434.1
gene_biotype: protein_coding
description:
  Quinone oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_02695
symbol: putA
gene_biotype: protein_coding
description:
  Pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: AAY24_02700
symbol: AKH19435.1
gene_biotype: protein_coding
description:
  LivHMGF is the membrane component of the LIV-I/LS branched-chain amino acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: AAY24_02705
symbol: livM
gene_biotype: protein_coding
description:
  ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: AAY24_02715
symbol: AKH19438.1
gene_biotype: protein_coding
description:
  ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.


ensembl_gene_id: AAY24_02735
symbol: livF
gene_biotype: protein_coding
description:
  Leucine/isoleucine/valine transporter ATP-binding subunit; With LivGHMJ and LivGHMK is part of the high-affinity branched-chain amino acid transport system; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_02745
symbol: AKH19444.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_02750
symbol: AKH19445.1
gene_biotype: protein_coding
description:
  LivHMGF is the membrane component of the LIV-I/LS branched-chain amino acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_02760
symbol: ppk1
gene_biotype: protein_coding
description:
  Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.


ensembl_gene_id: AAY24_02770
symbol: AKH19447.1
gene_biotype: protein_coding
description:
  Thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_02780
symbol: AKH19449.1
gene_biotype: protein_coding
description:
  Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone.


ensembl_gene_id: AAY24_02795
symbol: AKH19452.1
gene_biotype: protein_coding
description:
  Nitroreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_02815
symbol: AKH19455.1
gene_biotype: protein_coding
description:
  Carbamoyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_02845
symbol: AKH19458.1
gene_biotype: protein_coding
description:
  Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_02855
symbol: AKH19460.1
gene_biotype: protein_coding
description:
  acetoacetyl-CoA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_02860
symbol: AKH19461.1
gene_biotype: protein_coding
description:
  Maleylacetoacetate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_02865
symbol: AKH19462.1
gene_biotype: protein_coding
description:
  2-keto-4-pentenoate hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_02870
symbol: AKH19463.1
gene_biotype: protein_coding
description:
  Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_02880
symbol: AKH19465.1
gene_biotype: protein_coding
description:
  FAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_02885
symbol: AKH19466.1
gene_biotype: protein_coding
description:
  Beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_02895
symbol: AKH19468.1
gene_biotype: protein_coding
description:
  DNA polymerase IV; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_02920
symbol: rnfB
gene_biotype: protein_coding
description:
  Fe-S cluster protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.


ensembl_gene_id: AAY24_02925
symbol: AKH19472.1
gene_biotype: protein_coding
description:
  Pyruvate ferredoxin oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_02930
symbol: tpx
gene_biotype: protein_coding
description:
  Thiol peroxidase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Tpx subfamily.


ensembl_gene_id: AAY24_02935
symbol: rsxC
gene_biotype: protein_coding
description:
  Electron transporter RnfC; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily.


ensembl_gene_id: AAY24_02940
symbol: rnfD
gene_biotype: protein_coding
description:
  Electron transporter RnfD; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family.


ensembl_gene_id: AAY24_02945
symbol: rnfG
gene_biotype: protein_coding
description:
  FMN-binding protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the RnfG family.


ensembl_gene_id: AAY24_02950
symbol: rnfE
gene_biotype: protein_coding
description:
  Electron transporter; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.


ensembl_gene_id: AAY24_02955
symbol: AKH19478.1
gene_biotype: protein_coding
description:
  Electron transporter RnfA; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.


ensembl_gene_id: AAY24_02970
symbol: rhlE
gene_biotype: protein_coding
description:
  Hypothetical protein; DEAD-box RNA helicase involved in ribosome assembly. Has RNA- dependent ATPase activity and unwinds double-stranded RNA.


ensembl_gene_id: AAY24_02980
symbol: gapA
gene_biotype: protein_coding
description:
  Glyceraldehyde-3-phosphate dehydrogenase; Required for glycolysis; catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: AAY24_02985
symbol: AKH19484.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the phosphoenolpyruvate synthase (PEPS) by catalyzing its phosphorylation/dephosphorylation.


ensembl_gene_id: AAY24_02995
symbol: AKH19486.1
gene_biotype: protein_coding
description:
  Dihydrofolate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_03000
symbol: AKH19487.1
gene_biotype: protein_coding
description:
  C4-dicarboxylate ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_03015
symbol: AKH19489.1
gene_biotype: protein_coding
description:
  glutamyl-tRNA amidotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_03025
symbol: AKH19491.1
gene_biotype: protein_coding
description:
  Tartronate semialdehyde reductase; NADH-dependent; catalyzed the reversible formation of glycerate from tartronate semialdehyde; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_03030
symbol: AKH19492.1
gene_biotype: protein_coding
description:
  Methylmalonate-semialdehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_03035
symbol: AKH19493.1
gene_biotype: protein_coding
description:
  Carboxysome shell protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_03040
symbol: AKH19494.1
gene_biotype: protein_coding
description:
  Ethanolamine utilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_03045
symbol: AKH19495.1
gene_biotype: protein_coding
description:
  Ethanolamine utilization protein EutQ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_03050
symbol: AKH19496.1
gene_biotype: protein_coding
description:
  Cobalamin adenosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_03055
symbol: AKH19497.1
gene_biotype: protein_coding
description:
  Phosphotransacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_03060
symbol: AKH19498.1
gene_biotype: protein_coding
description:
  Carboxysome structural protein EutM; Ethanolamine utilization protein; involved in the degredation of ethanolamine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_03070
symbol: AKH19499.1
gene_biotype: protein_coding
description:
  Ethanolamine utilization protein EutN; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_03075
symbol: AKH22019.1
gene_biotype: protein_coding
description:
  Aldehyde dehydrogenase; Ethanolamine utilization protein; catalyzes the formation of acetyl-CoA from acetaldehyde; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_03080
symbol: AKH19500.1
gene_biotype: protein_coding
description:
  Ethanolamine utilization protein EutJ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_03090
symbol: AKH19502.1
gene_biotype: protein_coding
description:
  Ethanolamine utilization protein EutH; May be involved in the transport of ethanolamine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_03095
symbol: eutA
gene_biotype: protein_coding
description:
  Reactivating factor for ethanolamine ammonia lyase; Ethanolamine utilization protein EutA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_03100
symbol: AKH19504.1
gene_biotype: protein_coding
description:
  Ethanolamine ammonia-lyase; With EutC catalyzes the formation of acetaldehyde and ammonia from ethanolamine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_03105
symbol: AKH19505.1
gene_biotype: protein_coding
description:
  Ethanolamine ammonia-lyase; Catalyzes the formation of acetaldehyde from ethanolamine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_03110
symbol: AKH19506.1
gene_biotype: protein_coding
description:
  Carboxysome structural protein involved in ethanolamine utilization; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_03115
symbol: AKH19507.1
gene_biotype: protein_coding
description:
  NADH dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_03120
symbol: AKH19508.1
gene_biotype: protein_coding
description:
  Propanediol utilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_03145
symbol: AKH19513.1
gene_biotype: protein_coding
description:
  Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_03160
symbol: AKH19515.1
gene_biotype: protein_coding
description:
  DEAD/DEAH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_03170
symbol: AKH19517.1
gene_biotype: protein_coding
description:
  NrdJa; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen.


ensembl_gene_id: AAY24_03175
symbol: AKH19518.1
gene_biotype: protein_coding
description:
  Peptidase M52; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_03185
symbol: AKH19520.1
gene_biotype: protein_coding
description:
  Ni/Fe hydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_03195
symbol: AKH19522.1
gene_biotype: protein_coding
description:
  Heterodisulfide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_03200
symbol: AKH19523.1
gene_biotype: protein_coding
description:
  Hydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.


ensembl_gene_id: AAY24_03240
symbol: rnr
gene_biotype: protein_coding
description:
  Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.


ensembl_gene_id: AAY24_03255
symbol: rpsR
gene_biotype: protein_coding
description:
  30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.


ensembl_gene_id: AAY24_03270
symbol: dnaB
gene_biotype: protein_coding
description:
  DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily.


ensembl_gene_id: AAY24_03275
symbol: alr
gene_biotype: protein_coding
description:
  Converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_03280
symbol: radA
gene_biotype: protein_coding
description:
  DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.


ensembl_gene_id: AAY24_03305
symbol: AKH22022.1
gene_biotype: protein_coding
description:
  ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_03315
symbol: AKH19542.1
gene_biotype: protein_coding
description:
  Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_03325
symbol: fliF
gene_biotype: protein_coding
description:
  Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.


ensembl_gene_id: AAY24_03330
symbol: fliG
gene_biotype: protein_coding
description:
  Flagellar motor switch protein FliG; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.


ensembl_gene_id: AAY24_03340
symbol: fliI
gene_biotype: protein_coding
description:
  Flagellar protein FliI; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_03345
symbol: fliJ
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FliJ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_03350
symbol: AKH19548.1
gene_biotype: protein_coding
description:
  Flagellar protein FhlB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_03370
symbol: AKH19552.1
gene_biotype: protein_coding
description:
  Dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_03375
symbol: amrS
gene_biotype: protein_coding
description:
  Pyruvate formate lyase-activating protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_03385
symbol: queF
gene_biotype: protein_coding
description:
  7-cyano-7-deazaguanine reductase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1). Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily.


ensembl_gene_id: AAY24_03390
symbol: AKH19556.1
gene_biotype: protein_coding
description:
  Chromosome segregation protein SMC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_03400
symbol: ligA
gene_biotype: protein_coding
description:
  NAD-dependent DNA ligase LigA; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA; Belongs to the NAD-dependent DNA ligase family. LigA subfamily.


ensembl_gene_id: AAY24_03405
symbol: aroA
gene_biotype: protein_coding
description:
  3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.


ensembl_gene_id: AAY24_03410
symbol: cmk
gene_biotype: protein_coding
description:
  Cytidylate kinase; Catalyzes the formation of (d)CDP from ATP and (d)CMP; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_03415
symbol: rpsA
gene_biotype: protein_coding
description:
  30S ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence.


ensembl_gene_id: AAY24_03420
symbol: ihfB
gene_biotype: protein_coding
description:
  Integration host factor subunit beta; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family.


ensembl_gene_id: AAY24_03430
symbol: AKH19564.1
gene_biotype: protein_coding
description:
  Transcription accessory protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_03440
symbol: AKH19566.1
gene_biotype: protein_coding
description:
  Lysine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_03445
symbol: lexA
gene_biotype: protein_coding
description:
  LexA family transcriptional regulator; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair.


ensembl_gene_id: AAY24_03455
symbol: hppA
gene_biotype: protein_coding
description:
  Potassium transporter; Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na(+) movement across the membrane. Belongs to the H(+)-translocating pyrophosphatase (TC 3.A.10) family. K(+)-stimulated subfamily.


ensembl_gene_id: AAY24_03460
symbol: AKH19570.1
gene_biotype: protein_coding
description:
  cob(II)yrinic acid a,c-diamide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_03465
symbol: AKH19571.1
gene_biotype: protein_coding
description:
  Adenosylcobinamide kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_03485
symbol: AKH19573.1
gene_biotype: protein_coding
description:
  Cobalamin biosynthesis protein CobD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_03490
symbol: AKH19574.1
gene_biotype: protein_coding
description:
  Threonine-phosphate decarboxylase; Cobalamin biosynthesis protein; decarboxylates L-threonine-O-3-phosphate to yield (R)-1-amino-2-propanol O-2-phosphate, the precursor for the linkage between the nucleotide loop and the corrin ring in cobalamin; structurally similar to histidinol phosphate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_03515
symbol: tviC
gene_biotype: protein_coding
description:
  Vi polysaccharide biosynthesis protein VipB/TviC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_03520
symbol: AKH19579.1
gene_biotype: protein_coding
description:
  GDP-mannose dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_03540
symbol: AKH19581.1
gene_biotype: protein_coding
description:
  AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_03545
symbol: fadH
gene_biotype: protein_coding
description:
  2,4-dienoyl-CoA reductase; Catalyzes the formation of trans-2- enoyl-CoA from 2,4-dienoyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_03550
symbol: AKH19583.1
gene_biotype: protein_coding
description:
  Crp/Fnr family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_03570
symbol: AKH19586.1
gene_biotype: protein_coding
description:
  Taurine catabolism dioxygenase TauD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_03575
symbol: AKH19587.1
gene_biotype: protein_coding
description:
  Pterin-4-alpha-carbinolamine dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_03590
symbol: AKH19589.1
gene_biotype: protein_coding
description:
  Aminoacyl-histidine dipeptidase; Catalyzes the hydrolysis of Xaa-His dipeptides; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_03595
symbol: AKH19590.1
gene_biotype: protein_coding
description:
  Phosphoribulokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_03600
symbol: AKH19591.1
gene_biotype: protein_coding
description:
  Segregation and condensation protein A; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_03605
symbol: AKH19592.1
gene_biotype: protein_coding
description:
  Acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_03610
symbol: AKH22027.1
gene_biotype: protein_coding
description:
  Agmatine deiminase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_03620
symbol: AKH19594.1
gene_biotype: protein_coding
description:
  Cell division protein FtsX; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_03625
symbol: lolD
gene_biotype: protein_coding
description:
  Hypothetical protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner.


ensembl_gene_id: AAY24_03640
symbol: AKH19598.1
gene_biotype: protein_coding
description:
  Biopolymer transporter ExbB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_03645
symbol: AKH19599.1
gene_biotype: protein_coding
description:
  Biopolymer transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_03650
symbol: AKH19600.1
gene_biotype: protein_coding
description:
  Tetraacyldisaccharide 4'-kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_03655
symbol: AKH19601.1
gene_biotype: protein_coding
description:
  Tetraacyldisaccharide 4'-kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0434 family.


ensembl_gene_id: AAY24_03660
symbol: AKH19602.1
gene_biotype: protein_coding
description:
  3-deoxy-manno-octulosonate cytidylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_03680
symbol: AKH19606.1
gene_biotype: protein_coding
description:
  Phosphotyrosine protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_03690
symbol: rluC
gene_biotype: protein_coding
description:
  23S rRNA pseudouridylate synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: AAY24_03695
symbol: AKH19608.1
gene_biotype: protein_coding
description:
  HAD family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_03700
symbol: sppA
gene_biotype: protein_coding
description:
  Peptidase S49; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_03735
symbol: AKH19615.1
gene_biotype: protein_coding
description:
  Septum formation inhibitor Maf; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_03745
symbol: oadA
gene_biotype: protein_coding
description:
  Oxaloacetate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_03750
symbol: AKH19618.1
gene_biotype: protein_coding
description:
  glutaconyl-CoA decarboxylase subunit beta; Catalyzes the decarboxylation of oxaloacetate coupled to Na(+) translocation; Belongs to the GcdB/MmdB/OadB family.


ensembl_gene_id: AAY24_03760
symbol: rpmF
gene_biotype: protein_coding
description:
  Some L32 proteins have zinc finger motifs consisting of CXXC while others do not; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL32 family.


ensembl_gene_id: AAY24_03765
symbol: plsX
gene_biotype: protein_coding
description:
  Phosphate acyltransferase; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.


ensembl_gene_id: AAY24_03770
symbol: fabH
gene_biotype: protein_coding
description:
  3-oxoacyl-ACP synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.


ensembl_gene_id: AAY24_03775
symbol: fabG
gene_biotype: protein_coding
description:
  3-ketoacyl-ACP reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: AAY24_03785
symbol: fabF
gene_biotype: protein_coding
description:
  3-oxoacyl-ACP synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.


ensembl_gene_id: AAY24_03795
symbol: AKH19627.1
gene_biotype: protein_coding
description:
  Aminodeoxychorismate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_03800
symbol: tmk
gene_biotype: protein_coding
description:
  Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.


ensembl_gene_id: AAY24_03810
symbol: AKH19630.1
gene_biotype: protein_coding
description:
  Pilus assembly protein PilZ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_03815
symbol: AKH19631.1
gene_biotype: protein_coding
description:
  Deoxyribonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_03825
symbol: AKH19633.1
gene_biotype: protein_coding
description:
  Class V aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_03835
symbol: AKH22029.1
gene_biotype: protein_coding
description:
  LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_03840
symbol: AKH19635.1
gene_biotype: protein_coding
description:
  NADPH:quinone reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_03845
symbol: AKH19636.1
gene_biotype: protein_coding
description:
  5,10-methylene tetrahydromethanopterin reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_03855
symbol: AKH19638.1
gene_biotype: protein_coding
description:
  Dihydropteridine reductase; Catalyzes the reduction of nitroaromatic compounds such as nitrofurazone, quinones and the anti-tumor agent CB1954; NAD(P)H-dependent; oxygen insensitive; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_03865
symbol: AKH19639.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SOS response-associated peptidase family.


ensembl_gene_id: AAY24_03900
symbol: AKH19643.1
gene_biotype: protein_coding
description:
  5'-methylthioadenosine phosphorylase; Catalyzes the phosphorolytic cleavage of 6-oxopurine nucleosides; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_03905
symbol: AKH19644.1
gene_biotype: protein_coding
description:
  Alkyl hydroperoxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_03910
symbol: nagZ
gene_biotype: protein_coding
description:
  Beta-hexosaminidase; Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide- linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N- acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides. Belongs to the glycosyl hydrolase 3 family. NagZ subfamily.


ensembl_gene_id: AAY24_03915
symbol: AKH22033.1
gene_biotype: protein_coding
description:
  Flagellar basal body protein FliL; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_03925
symbol: AKH19647.1
gene_biotype: protein_coding
description:
  Adenylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_03930
symbol: rlmD
gene_biotype: protein_coding
description:
  23S rRNA methyltransferase; Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. RlmD subfamily.


ensembl_gene_id: AAY24_03945
symbol: cysM
gene_biotype: protein_coding
description:
  Cysteine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cysteine synthase/cystathionine beta- synthase family.


ensembl_gene_id: AAY24_03970
symbol: AKH19652.1
gene_biotype: protein_coding
description:
  Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_03975
symbol: AKH19653.1
gene_biotype: protein_coding
description:
  Saccharopine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_03980
symbol: cobQ
gene_biotype: protein_coding
description:
  Cobyric acid synthase; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.


ensembl_gene_id: AAY24_03990
symbol: pdxJ
gene_biotype: protein_coding
description:
  Pyridoxine 5'-phosphate synthase; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate.


ensembl_gene_id: AAY24_04000
symbol: era
gene_biotype: protein_coding
description:
  GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.


ensembl_gene_id: AAY24_04005
symbol: rnc
gene_biotype: protein_coding
description:
  Hypothetical protein; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.


ensembl_gene_id: AAY24_04015
symbol: lepB
gene_biotype: protein_coding
description:
  Signal peptidase I; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S26 family.


ensembl_gene_id: AAY24_04020
symbol: lepA
gene_biotype: protein_coding
description:
  Elongation factor 4; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.


ensembl_gene_id: AAY24_04030
symbol: AKH19663.1
gene_biotype: protein_coding
description:
  Serine peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S1C family.


ensembl_gene_id: AAY24_04045
symbol: rpoE
gene_biotype: protein_coding
description:
  RNA polymerase sigma factor RpoE; Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this sigma factor is involved in heat shock and oxidative stress response; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: AAY24_04065
symbol: sdhB
gene_biotype: protein_coding
description:
  Part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_04070
symbol: sdhA
gene_biotype: protein_coding
description:
  Part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.


ensembl_gene_id: AAY24_04090
symbol: AKH22036.1
gene_biotype: protein_coding
description:
  ssDNA exonuclease RecJ; 5'-3' single-stranded-DNA-specific exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_04105
symbol: cysZ
gene_biotype: protein_coding
description:
  Sulfate transporter; High affinity, high specificity proton-dependent sulfate transporter, which mediates sulfate uptake. Provides the sulfur source for the cysteine synthesis pathway; Belongs to the CysZ family.


ensembl_gene_id: AAY24_04120
symbol: dksA
gene_biotype: protein_coding
description:
  Molecular chaperone DnaK; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. Also required for regulation of fis expression.


ensembl_gene_id: AAY24_04135
symbol: AKH19681.1
gene_biotype: protein_coding
description:
  ArsC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_04145
symbol: AKH19683.1
gene_biotype: protein_coding
description:
  Sulfite reductase subunit gamma; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_04160
symbol: AKH19686.1
gene_biotype: protein_coding
description:
  Serine dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the iron-sulfur dependent L-serine dehydratase family.


ensembl_gene_id: AAY24_04180
symbol: AKH19689.1
gene_biotype: protein_coding
description:
  Thiamine biosynthesis protein ThiF; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_04210
symbol: AKH19695.1
gene_biotype: protein_coding
description:
  Peptidase S1; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_04215
symbol: AKH19696.1
gene_biotype: protein_coding
description:
  Adenylylsulfate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_04220
symbol: AKH22037.1
gene_biotype: protein_coding
description:
  Sugar transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_04235
symbol: AKH22038.1
gene_biotype: protein_coding
description:
  Alginate O-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_04240
symbol: AKH19699.1
gene_biotype: protein_coding
description:
  acyl--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_04260
symbol: AKH19702.1
gene_biotype: protein_coding
description:
  Acyl carrier protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_04325
symbol: AKH19711.1
gene_biotype: protein_coding
description:
  Capsule biosynthesis protein CapK; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_04330
symbol: AKH19712.1
gene_biotype: protein_coding
description:
  Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_04355
symbol: AKH19717.1
gene_biotype: protein_coding
description:
  Peptidoglycan bridge formation protein FemAB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_04360
symbol: AKH22044.1
gene_biotype: protein_coding
description:
  Polysaccharide deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_04365
symbol: AKH19718.1
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 2-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.


ensembl_gene_id: AAY24_04385
symbol: AKH19722.1
gene_biotype: protein_coding
description:
  Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_04435
symbol: AKH19729.1
gene_biotype: protein_coding
description:
  UDP-galactose-4-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_04440
symbol: AKH19730.1
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate dehydrogenase; In Escherichia coli this homodimeric enzyme is expressed under aerobic conditions; anaerobic expression is repressed by the arcAB system; converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8; associates with the cytoplasmic membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_04445
symbol: AKH19731.1
gene_biotype: protein_coding
description:
  Glycerol kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_04460
symbol: AKH19734.1
gene_biotype: protein_coding
description:
  Hypoxanthine phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_04465
symbol: AKH19735.1
gene_biotype: protein_coding
description:
  Chemotaxis protein CheX; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_04475
symbol: AKH19737.1
gene_biotype: protein_coding
description:
  Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_04480
symbol: ppk2
gene_biotype: protein_coding
description:
  Polyphosphate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_04490
symbol: AKH19740.1
gene_biotype: protein_coding
description:
  Spore maturation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_04495
symbol: AKH19741.1
gene_biotype: protein_coding
description:
  Nucleoside recognition family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_04510
symbol: AKH19744.1
gene_biotype: protein_coding
description:
  Von Willebrand factor A; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_04535
symbol: AKH19747.1
gene_biotype: protein_coding
description:
  AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_04560
symbol: AKH19751.1
gene_biotype: protein_coding
description:
  Bacterioferritin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_04570
symbol: AKH19753.1
gene_biotype: protein_coding
description:
  Prephenate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_04575
symbol: hisC
gene_biotype: protein_coding
description:
  Aspartate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.


ensembl_gene_id: AAY24_04580
symbol: pheA
gene_biotype: protein_coding
description:
  Prephenate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_04585
symbol: AKH19756.1
gene_biotype: protein_coding
description:
  3-phosphoglycerate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: AAY24_04590
symbol: serC
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily.


ensembl_gene_id: AAY24_04595
symbol: gyrA
gene_biotype: protein_coding
description:
  DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: AAY24_04600
symbol: mtnA
gene_biotype: protein_coding
description:
  Methylthioribose-1-phosphate isomerase; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P).


ensembl_gene_id: AAY24_04605
symbol: mtaD
gene_biotype: protein_coding
description:
  N-ethylammeline chlorohydrolase; Catalyzes the deamination of 5-methylthioadenosine and S- adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine. Belongs to the metallo-dependent hydrolases superfamily. MTA/SAH deaminase family.


ensembl_gene_id: AAY24_04615
symbol: ubiG
gene_biotype: protein_coding
description:
  3-demethylubiquinone-9 3-methyltransferase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family.


ensembl_gene_id: AAY24_04620
symbol: AKH19762.1
gene_biotype: protein_coding
description:
  Phosphoglycolate phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_04625
symbol: AKH19763.1
gene_biotype: protein_coding
description:
  3-oxoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_04655
symbol: mnmA
gene_biotype: protein_coding
description:
  tRNA 2-thiouridylase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.


ensembl_gene_id: AAY24_04670
symbol: acnB
gene_biotype: protein_coding
description:
  Bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; Catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aconitase/IPM isomerase family.


ensembl_gene_id: AAY24_04675
symbol: purB
gene_biotype: protein_coding
description:
  Adenylosuccinate lyase; Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.


ensembl_gene_id: AAY24_04695
symbol: hrpA
gene_biotype: protein_coding
description:
  ATP-dependent helicase HrpA; Involved in the post-transcriptional processing of the daa operon mRNA, which encodes proteins involved in fimbrial biogenesis of an enteropathogenic E. coli strain; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_04715
symbol: AKH19774.1
gene_biotype: protein_coding
description:
  Fructose-bisphosphate aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_04755
symbol: AKH19781.1
gene_biotype: protein_coding
description:
  Ribosomal protein S6 modification protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_04760
symbol: rimK
gene_biotype: protein_coding
description:
  Ribosomal protein S6 modification protein; Responsible for the addition of glutamate residues to the C-terminus of ribosomal protein S6; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the RimK family.


ensembl_gene_id: AAY24_04765
symbol: AKH19783.1
gene_biotype: protein_coding
description:
  Succinylglutamate desuccinylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_04770
symbol: AKH19784.1
gene_biotype: protein_coding
description:
  NAD synthetase; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family.


ensembl_gene_id: AAY24_04775
symbol: AKH19785.1
gene_biotype: protein_coding
description:
  Pyridine nucleotide transhydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_04780
symbol: AKH19786.1
gene_biotype: protein_coding
description:
  NADP transhydrogenase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_04785
symbol: AKH19787.1
gene_biotype: protein_coding
description:
  Carboxylesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_04790
symbol: AKH19788.1
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_04795
symbol: AKH19789.1
gene_biotype: protein_coding
description:
  Nuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_04800
symbol: AKH19790.1
gene_biotype: protein_coding
description:
  Sulfatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_04820
symbol: AKH22055.1
gene_biotype: protein_coding
description:
  TRAP dicarboxylate transporter subunit DctM; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_04855
symbol: pgsA
gene_biotype: protein_coding
description:
  CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: AAY24_04860
symbol: uvrC
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.


ensembl_gene_id: AAY24_04865
symbol: AKH19798.1
gene_biotype: protein_coding
description:
  SPO1 DNA polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_04890
symbol: AKH19801.1
gene_biotype: protein_coding
description:
  Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the BI1 family.


ensembl_gene_id: AAY24_04895
symbol: AKH22056.1
gene_biotype: protein_coding
description:
  seryl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_04900
symbol: serS
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).


ensembl_gene_id: AAY24_04910
symbol: crcB
gene_biotype: protein_coding
description:
  Camphor resistance protein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.


ensembl_gene_id: AAY24_04915
symbol: AKH19805.1
gene_biotype: protein_coding
description:
  Recombination factor protein RarA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_04920
symbol: lolA
gene_biotype: protein_coding
description:
  Hypothetical protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).


ensembl_gene_id: AAY24_04925
symbol: AKH22057.1
gene_biotype: protein_coding
description:
  Cell division protein FtsK; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_04930
symbol: trxB
gene_biotype: protein_coding
description:
  Thioredoxin reductase; Catalyzes the transfer of electrons from NADPH to thioredoxin; FAD/NAD(P) binding; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_04940
symbol: AKH19809.1
gene_biotype: protein_coding
description:
  leucyl/phenylalanyl-tRNA--protein transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_04950
symbol: infA
gene_biotype: protein_coding
description:
  Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.


ensembl_gene_id: AAY24_04955
symbol: clpA
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ClpA/ClpB family.


ensembl_gene_id: AAY24_04960
symbol: clpS
gene_biotype: protein_coding
description:
  Clp protease ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.


ensembl_gene_id: AAY24_04970
symbol: AKH19815.1
gene_biotype: protein_coding
description:
  Converts isocitrate to alpha ketoglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_04975
symbol: AKH19816.1
gene_biotype: protein_coding
description:
  Endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_04980
symbol: AKH22058.1
gene_biotype: protein_coding
description:
  Pseudouridine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pseudouridine synthase RsuA family.


ensembl_gene_id: AAY24_04985
symbol: scpB
gene_biotype: protein_coding
description:
  Hypothetical protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: AAY24_04990
symbol: AKH19817.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: AAY24_04995
symbol: AKH19818.1
gene_biotype: protein_coding
description:
  tryptophan--tRNA ligase; Catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: AAY24_05005
symbol: AKH19820.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SUA5 family.


ensembl_gene_id: AAY24_05010
symbol: AKH19821.1
gene_biotype: protein_coding
description:
  Phosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_05015
symbol: AKH19822.1
gene_biotype: protein_coding
description:
  Septation protein A; Involved in cell division; probably involved in intracellular septation; Belongs to the YciB family.


ensembl_gene_id: AAY24_05025
symbol: moaA
gene_biotype: protein_coding
description:
  Molybdenum cofactor biosynthesis protein MoaA; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.


ensembl_gene_id: AAY24_05030
symbol: AKH19825.1
gene_biotype: protein_coding
description:
  Butanol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_05035
symbol: AKH19826.1
gene_biotype: protein_coding
description:
  Nitrate reductase; Electron transfer subunit of the periplasmic nitrate reductase complex NapAB; Belongs to the NapB family.


ensembl_gene_id: AAY24_05040
symbol: napH
gene_biotype: protein_coding
description:
  Part of NapHG quinol dehydrogenase; couples electron transfer from ubiquinone-ubiquinol couple via NapC/B to NapA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_05045
symbol: napG
gene_biotype: protein_coding
description:
  Quinol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_05050
symbol: napA
gene_biotype: protein_coding
description:
  Nitrate reductase; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite.


ensembl_gene_id: AAY24_05055
symbol: napD
gene_biotype: protein_coding
description:
  Hypothetical protein; Chaperone for NapA, the catalytic subunit of the periplasmic nitrate reductase. It binds directly and specifically to the twin- arginine signal peptide of NapA, preventing premature interaction with the Tat translocase and premature export.


ensembl_gene_id: AAY24_05065
symbol: mfd
gene_biotype: protein_coding
description:
  Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.


ensembl_gene_id: AAY24_05085
symbol: AKH19832.1
gene_biotype: protein_coding
description:
  Catalyzes the oxidation of acetaldehyde, benzaldehyde, propionaldehyde and other aldehydes; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_05115
symbol: glnS
gene_biotype: protein_coding
description:
  glutamate--tRNA ligase; Catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_05120
symbol: gltX
gene_biotype: protein_coding
description:
  glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu).


ensembl_gene_id: AAY24_05145
symbol: AKH19838.1
gene_biotype: protein_coding
description:
  Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_05160
symbol: AKH19841.1
gene_biotype: protein_coding
description:
  Hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_05170
symbol: yeiP
gene_biotype: protein_coding
description:
  Elongation factor P; Stimulates the peptidyltransferase activity of the 70S ribosome and enhances dipeptide synthesis with N-formylmethionyl-tRNA and puromycin in vitro, suggesting its involvement in the formation of the first peptide bond of a protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the elongation factor P family.


ensembl_gene_id: AAY24_05175
symbol: AKH19844.1
gene_biotype: protein_coding
description:
  Sulfurtransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_05185
symbol: purA
gene_biotype: protein_coding
description:
  Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.


ensembl_gene_id: AAY24_05190
symbol: hisZ
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase regulatory subunit; Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine.


ensembl_gene_id: AAY24_05210
symbol: hflX
gene_biotype: protein_coding
description:
  GTPase HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.


ensembl_gene_id: AAY24_05215
symbol: hfq
gene_biotype: protein_coding
description:
  RNA-binding protein Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family.


ensembl_gene_id: AAY24_05220
symbol: miaA
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.


ensembl_gene_id: AAY24_05225
symbol: mutL
gene_biotype: protein_coding
description:
  DNA mismatch repair protein; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.


ensembl_gene_id: AAY24_05230
symbol: AKH22065.1
gene_biotype: protein_coding
description:
  N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_05240
symbol: AKH19854.1
gene_biotype: protein_coding
description:
  Carbohydrate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_05245
symbol: AKH19855.1
gene_biotype: protein_coding
description:
  Epoxyqueuosine reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_05255
symbol: orn
gene_biotype: protein_coding
description:
  Oligoribonuclease; 3'-to-5' exoribonuclease specific for small oligoribonucleotides; Belongs to the oligoribonuclease family.


ensembl_gene_id: AAY24_05270
symbol: rsgA
gene_biotype: protein_coding
description:
  Ribosome small subunit-dependent GTPase; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.


ensembl_gene_id: AAY24_05275
symbol: gorA
gene_biotype: protein_coding
description:
  Catalyzes the reduction of 2 glutathione to glutathione disulfide; maintains high levels of reduced glutathione in the cytosol; involved in redox regulation and oxidative defense; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_05345
symbol: AKH19870.1
gene_biotype: protein_coding
description:
  O-acetylhomoserine aminocarboxypropyltransferase; Catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_05350
symbol: sat
gene_biotype: protein_coding
description:
  Sulfate adenylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sulfate adenylyltransferase family.


ensembl_gene_id: AAY24_05375
symbol: pyrF
gene_biotype: protein_coding
description:
  Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily.


ensembl_gene_id: AAY24_05385
symbol: AKH19876.1
gene_biotype: protein_coding
description:
  DNA recombination protein RecN; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_05400
symbol: dapB
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.


ensembl_gene_id: AAY24_05405
symbol: dnaJ
gene_biotype: protein_coding
description:
  Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...]


ensembl_gene_id: AAY24_05415
symbol: grpE
gene_biotype: protein_coding
description:
  Molecular chaperone GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP [...]


ensembl_gene_id: AAY24_05420
symbol: hrcA
gene_biotype: protein_coding
description:
  HrcA family transcriptional regulator; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons.


ensembl_gene_id: AAY24_05425
symbol: nadK
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.


ensembl_gene_id: AAY24_05430
symbol: AKH19883.1
gene_biotype: protein_coding
description:
  Recombination and repair protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_05435
symbol: fur
gene_biotype: protein_coding
description:
  Fur family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Fur family.


ensembl_gene_id: AAY24_05440
symbol: bamE
gene_biotype: protein_coding
description:
  Hypothetical protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.


ensembl_gene_id: AAY24_05450
symbol: AKH19887.1
gene_biotype: protein_coding
description:
  Cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_05455
symbol: AKH19888.1
gene_biotype: protein_coding
description:
  Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.


ensembl_gene_id: AAY24_05460
symbol: smpB
gene_biotype: protein_coding
description:
  SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...]


ensembl_gene_id: AAY24_05465
symbol: AKH19890.1
gene_biotype: protein_coding
description:
  Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_05480
symbol: AKH19893.1
gene_biotype: protein_coding
description:
  Restriction endonuclease subunit R; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_05500
symbol: AKH19895.1
gene_biotype: protein_coding
description:
  Restriction endonuclease subunit M; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_05510
symbol: AKH19897.1
gene_biotype: protein_coding
description:
  AlpA family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_05540
symbol: AKH19903.1
gene_biotype: protein_coding
description:
  Ribosylglycohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_05555
symbol: AKH19905.1
gene_biotype: protein_coding
description:
  Sulfate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_05560
symbol: AKH19906.1
gene_biotype: protein_coding
description:
  Universal stress protein UspA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_05600
symbol: AKH19912.1
gene_biotype: protein_coding
description:
  Major facilitator transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_05660
symbol: AKH19922.1
gene_biotype: protein_coding
description:
  Regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_05690
symbol: AKH19928.1
gene_biotype: protein_coding
description:
  16S rRNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_05700
symbol: AKH22074.1
gene_biotype: protein_coding
description:
  ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: AAY24_05715
symbol: AKH19930.1
gene_biotype: protein_coding
description:
  DNA-3-methyladenine glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_05730
symbol: ihfA
gene_biotype: protein_coding
description:
  Integration host factor subunit alpha; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family.


ensembl_gene_id: AAY24_05735
symbol: pheT
gene_biotype: protein_coding
description:
  phenylalanyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.


ensembl_gene_id: AAY24_05740
symbol: pheS
gene_biotype: protein_coding
description:
  phenylalanyl-tRNA synthetase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.


ensembl_gene_id: AAY24_05745
symbol: rplT
gene_biotype: protein_coding
description:
  50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.


ensembl_gene_id: AAY24_05750
symbol: rpmI
gene_biotype: protein_coding
description:
  50S ribosomal protein L35; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL35 family.


ensembl_gene_id: AAY24_05755
symbol: infC
gene_biotype: protein_coding
description:
  Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.


ensembl_gene_id: AAY24_05760
symbol: thrS
gene_biotype: protein_coding
description:
  threonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr).


ensembl_gene_id: AAY24_05775
symbol: uvrB
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate  [...]


ensembl_gene_id: AAY24_05815
symbol: metZ
gene_biotype: protein_coding
description:
  O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide.


ensembl_gene_id: AAY24_05830
symbol: AKH19947.1
gene_biotype: protein_coding
description:
  Indolepyruvate ferredoxin oxidoreductase; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_05835
symbol: AKH19948.1
gene_biotype: protein_coding
description:
  Amino acid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.


ensembl_gene_id: AAY24_05845
symbol: AKH19950.1
gene_biotype: protein_coding
description:
  Carboxylate--amine ligase; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily.


ensembl_gene_id: AAY24_05850
symbol: AKH19951.1
gene_biotype: protein_coding
description:
  Asparaginase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_05875
symbol: AKH19954.1
gene_biotype: protein_coding
description:
  2-isopropylmalate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the alpha-IPM synthase/homocitrate synthase family.


ensembl_gene_id: AAY24_05880
symbol: AKH19955.1
gene_biotype: protein_coding
description:
  Threonine synthase; Catalyzes the formation of L-threonine from O-phospho-L-homoserine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_05885
symbol: AKH19956.1
gene_biotype: protein_coding
description:
  Cro/Cl family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_05920
symbol: AKH19962.1
gene_biotype: protein_coding
description:
  Phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_05950
symbol: AKH22082.1
gene_biotype: protein_coding
description:
  Phospholipid-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_05955
symbol: AKH19967.1
gene_biotype: protein_coding
description:
  Isochorismatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_05960
symbol: AKH19968.1
gene_biotype: protein_coding
description:
  Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_05965
symbol: AKH19969.1
gene_biotype: protein_coding
description:
  uroporphyrin-III methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_05975
symbol: AKH19971.1
gene_biotype: protein_coding
description:
  Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_05985
symbol: AKH19973.1
gene_biotype: protein_coding
description:
  (Fe-S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_05990
symbol: AKH19974.1
gene_biotype: protein_coding
description:
  Lactate utilization protein B/C; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_06020
symbol: AKH19979.1
gene_biotype: protein_coding
description:
  Fatty acid hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_06030
symbol: AKH22085.1
gene_biotype: protein_coding
description:
  Homoserine dehydrogenase; Catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_06035
symbol: AKH19980.1
gene_biotype: protein_coding
description:
  Glutamate-pyruvate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_06060
symbol: purF
gene_biotype: protein_coding
description:
  Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.


ensembl_gene_id: AAY24_06065
symbol: AKH19985.1
gene_biotype: protein_coding
description:
  Colicin V production CvpA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_06080
symbol: accD
gene_biotype: protein_coding
description:
  Hypothetical protein; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.


ensembl_gene_id: AAY24_06085
symbol: trpA
gene_biotype: protein_coding
description:
  Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.


ensembl_gene_id: AAY24_06090
symbol: trpB
gene_biotype: protein_coding
description:
  Tryptophan synthase subunit alpha; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.


ensembl_gene_id: AAY24_06095
symbol: AKH19990.1
gene_biotype: protein_coding
description:
  N-(5'-phosphoribosyl)anthranilate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_06100
symbol: truA
gene_biotype: protein_coding
description:
  Pseudouridine synthase; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.


ensembl_gene_id: AAY24_06110
symbol: AKH19993.1
gene_biotype: protein_coding
description:
  Aspartate-semialdehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_06115
symbol: asd
gene_biotype: protein_coding
description:
  Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.


ensembl_gene_id: AAY24_06120
symbol: leuB
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.


ensembl_gene_id: AAY24_06125
symbol: leuD
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydratase; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily.


ensembl_gene_id: AAY24_06130
symbol: leuC
gene_biotype: protein_coding
description:
  Isopropylmalate isomerase; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.


ensembl_gene_id: AAY24_06140
symbol: narL
gene_biotype: protein_coding
description:
  Two-component response regulator NarL; phosphorylated by NarQ; activates transcription of nitrate and nitrite reductase genes and represses transcription of fumarate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_06155
symbol: AKH20002.1
gene_biotype: protein_coding
description:
  Antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_06160
symbol: narZ
gene_biotype: protein_coding
description:
  Nitrate reductase; With NarYV catalyzes the reduction of nitrate; the beta subunit is an iron sulfur cluster containing electron transfer subunit; one of 3 nitrate reductases in E. coli; expression of nitrate reductase Z is not dependent on nitrate levels; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: AAY24_06165
symbol: narH
gene_biotype: protein_coding
description:
  Nitrate reductase; With NarGJI catalyzes the reduction of nitrate; the beta subunit is an iron sulfur cluster containing electron transfer subunit; one of 3 nitrate reductases in E. coli and in E. coli is expressed when nitrate levels are high; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_06175
symbol: narI
gene_biotype: protein_coding
description:
  Nitrate reductase; With NarGJH catalyzes the reduction of nitrate; the gamma subunit localizes NarGHI to the membrane; one of 3 nitrate reductases in E. coli and in E. coli is expressed when nitrate levels are high; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_06195
symbol: AKH20010.1
gene_biotype: protein_coding
description:
  TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_06205
symbol: AKH20012.1
gene_biotype: protein_coding
description:
  GCN5 family acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_06225
symbol: AKH20015.1
gene_biotype: protein_coding
description:
  CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3- dehydrase reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_06230
symbol: AKH20016.1
gene_biotype: protein_coding
description:
  Cytochrome C oxidase subunit III; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_06235
symbol: ipdC
gene_biotype: protein_coding
description:
  Indole-3-pyruvate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_06275
symbol: AKH20024.1
gene_biotype: protein_coding
description:
  Crotonase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_06305
symbol: AKH20028.1
gene_biotype: protein_coding
description:
  Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_06315
symbol: AKH20030.1
gene_biotype: protein_coding
description:
  Adenosylcobalamin biosynthesis, GlcG-related protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_06335
symbol: mtgA
gene_biotype: protein_coding
description:
  Peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family.


ensembl_gene_id: AAY24_06345
symbol: ribB
gene_biotype: protein_coding
description:
  3,4-dihydroxy-2-butanone 4-phosphate synthase; DHBP synthase; functions during riboflavin biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_06365
symbol: AKH20039.1
gene_biotype: protein_coding
description:
  Thiosulfide reductase/anaerobic DMSO reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_06375
symbol: AKH20041.1
gene_biotype: protein_coding
description:
  (4Fe-4S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_06380
symbol: AKH20042.1
gene_biotype: protein_coding
description:
  ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_06390
symbol: AKH20043.1
gene_biotype: protein_coding
description:
  Acetoacetate metabolism regulatory protein AtoC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_06470
symbol: recR
gene_biotype: protein_coding
description:
  Hypothetical protein; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.


ensembl_gene_id: AAY24_06475
symbol: AKH20059.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.


ensembl_gene_id: AAY24_06480
symbol: dnaX
gene_biotype: protein_coding
description:
  DNA polymerase III subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: AAY24_06495
symbol: AKH22093.1
gene_biotype: protein_coding
description:
  Thiamine biosynthesis protein ThiS; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_06500
symbol: AKH20062.1
gene_biotype: protein_coding
description:
  Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_06505
symbol: AKH20063.1
gene_biotype: protein_coding
description:
  Aldehyde:ferredoxin oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_06515
symbol: AKH20065.1
gene_biotype: protein_coding
description:
  Tungsten ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_06535
symbol: AKH20068.1
gene_biotype: protein_coding
description:
  Molybdopterin molybdenumtransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_06570
symbol: AKH20073.1
gene_biotype: protein_coding
description:
  acetyl-CoA acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family.


ensembl_gene_id: AAY24_06585
symbol: AKH20076.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the V-ATPase 116 kDa subunit family.


ensembl_gene_id: AAY24_06605
symbol: atpA
gene_biotype: protein_coding
description:
  ATP synthase subunit A; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.


ensembl_gene_id: AAY24_06610
symbol: atpB
gene_biotype: protein_coding
description:
  ATP synthase subunit B; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit.


ensembl_gene_id: AAY24_06630
symbol: aspA
gene_biotype: protein_coding
description:
  Aspartate ammonia-lyase; Catalyzes the formation of fumarate from aspartate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_06635
symbol: AKH20085.1
gene_biotype: protein_coding
description:
  DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_06665
symbol: AKH20088.1
gene_biotype: protein_coding
description:
  Nitric oxide reductase activation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_06670
symbol: AKH20089.1
gene_biotype: protein_coding
description:
  Nucleoside diphosphate kinase regulator; Regulates the synthesis of nucleoside triphosphates for nucleic acid synthesis, CTP for lipid synthesis, and GTP for protein elongation; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_06675
symbol: AKH20090.1
gene_biotype: protein_coding
description:
  Portal protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.


ensembl_gene_id: AAY24_06680
symbol: AKH22097.1
gene_biotype: protein_coding
description:
  Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_06690
symbol: AKH20092.1
gene_biotype: protein_coding
description:
  Zn-dependent hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_06700
symbol: AKH20094.1
gene_biotype: protein_coding
description:
  Cytochrome B561; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_06740
symbol: AKH20101.1
gene_biotype: protein_coding
description:
  D-beta-hydroxybutyrate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_06750
symbol: mscL
gene_biotype: protein_coding
description:
  Mechanosensitive ion channel protein MscL; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell.


ensembl_gene_id: AAY24_06755
symbol: AKH20104.1
gene_biotype: protein_coding
description:
  Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_06765
symbol: AKH20106.1
gene_biotype: protein_coding
description:
  PhnA protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_06770
symbol: ppc
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle; Belongs to the PEPCase type 1 family.


ensembl_gene_id: AAY24_06775
symbol: AKH20108.1
gene_biotype: protein_coding
description:
  Ribose-phosphate pyrophosphokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_06780
symbol: AKH20109.1
gene_biotype: protein_coding
description:
  Pyridoxamine 5-phosphate oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_06785
symbol: AKH22098.1
gene_biotype: protein_coding
description:
  Copper ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_06800
symbol: AKH20112.1
gene_biotype: protein_coding
description:
  Response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_06845
symbol: AKH20121.1
gene_biotype: protein_coding
description:
  Cytochrome C biogenesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_06870
symbol: hemF
gene_biotype: protein_coding
description:
  Coproporphyrinogen III oxidase; Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen- IX.


ensembl_gene_id: AAY24_06875
symbol: AKH20126.1
gene_biotype: protein_coding
description:
  Thiopurine S-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_06895
symbol: AKH20130.1
gene_biotype: protein_coding
description:
  Peroxiredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_06910
symbol: AKH20132.1
gene_biotype: protein_coding
description:
  Formate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_06950
symbol: AKH20138.1
gene_biotype: protein_coding
description:
  ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_06960
symbol: AKH22102.1
gene_biotype: protein_coding
description:
  Aminomethyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_06995
symbol: AKH20145.1
gene_biotype: protein_coding
description:
  Sugar metabolism transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_07000
symbol: AKH20146.1
gene_biotype: protein_coding
description:
  Iron transporter FeoB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_07005
symbol: AKH22103.1
gene_biotype: protein_coding
description:
  Iron transporter FeoA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_07015
symbol: AKH20148.1
gene_biotype: protein_coding
description:
  Hydroperoxidase; Has catalase and peroxidase activities; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_07030
symbol: AKH20150.1
gene_biotype: protein_coding
description:
  Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_07075
symbol: AKH20157.1
gene_biotype: protein_coding
description:
  Carbonate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_07080
symbol: AKH20158.1
gene_biotype: protein_coding
description:
  threonyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_07115
symbol: AKH20163.1
gene_biotype: protein_coding
description:
  Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_07140
symbol: AKH22105.1
gene_biotype: protein_coding
description:
  Methylamine utilization protein MauG; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_07165
symbol: AKH20170.1
gene_biotype: protein_coding
description:
  3-ketoacyl-ACP reductase; Catalyzes the conversion of 3-hydroxyacyl-CoA to 3-oxyacyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_07190
symbol: AKH20173.1
gene_biotype: protein_coding
description:
  Nucleoprotein/polynucleotide-associated enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_07195
symbol: AKH20174.1
gene_biotype: protein_coding
description:
  Aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_07200
symbol: modB
gene_biotype: protein_coding
description:
  Molybdenum ABC transporter permease; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: AAY24_07205
symbol: modC
gene_biotype: protein_coding
description:
  Molybdenum ABC transporter ATP-binding protein; Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Molybdate importer (TC 3.A.1.8) family.


ensembl_gene_id: AAY24_07210
symbol: AKH20177.1
gene_biotype: protein_coding
description:
  Molybdopterin-guanine dinucleotide biosynthesis protein B; In Escherichia coli the MobB protein is not essential but has been found to interact with multiple proteins involved in the molybdopterin guanine dinucleotide cofactor biosynthesis pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_07230
symbol: AKH20179.1
gene_biotype: protein_coding
description:
  Chemotaxis protein CheW; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_07240
symbol: AKH20180.1
gene_biotype: protein_coding
description:
  Cobalamin biosynthesis protein CobQ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_07250
symbol: motC
gene_biotype: protein_coding
description:
  Flagellar motor protein; Homologous to MotA; this protein with a related protein (a MotB homolog) forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; either MotAB or MotCD is sufficient for swimming, but both are necessary for swarming motility; these organisms have both MotA and MotC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_07255
symbol: cheB
gene_biotype: protein_coding
description:
  Chemotaxis protein CheY; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.


ensembl_gene_id: AAY24_07260
symbol: AKH20184.1
gene_biotype: protein_coding
description:
  Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_07265
symbol: AKH20185.1
gene_biotype: protein_coding
description:
  Chemotaxis protein CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P).


ensembl_gene_id: AAY24_07275
symbol: fliA
gene_biotype: protein_coding
description:
  Flagellar biosynthesis sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes; Belongs to the sigma-70 factor family. FliA subfamily.


ensembl_gene_id: AAY24_07280
symbol: AKH20187.1
gene_biotype: protein_coding
description:
  Cobyrinic acid a,c-diamide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_07290
symbol: flhA
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.


ensembl_gene_id: AAY24_07295
symbol: flhB
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family.


ensembl_gene_id: AAY24_07300
symbol: fliR
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family.


ensembl_gene_id: AAY24_07310
symbol: fliP
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein flip; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.


ensembl_gene_id: AAY24_07320
symbol: fliN
gene_biotype: protein_coding
description:
  Flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.


ensembl_gene_id: AAY24_07325
symbol: fliM
gene_biotype: protein_coding
description:
  Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.


ensembl_gene_id: AAY24_07360
symbol: AKH20199.1
gene_biotype: protein_coding
description:
  Permase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_07390
symbol: AKH20204.1
gene_biotype: protein_coding
description:
  SirA family protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sulfur carrier protein TusA family.


ensembl_gene_id: AAY24_07400
symbol: cobA
gene_biotype: protein_coding
description:
  Sirohydrochlorin ferrochelatase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme. In the N-terminal section; belongs to the precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase family.


ensembl_gene_id: AAY24_07405
symbol: AKH20207.1
gene_biotype: protein_coding
description:
  Sterol-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_07410
symbol: AKH20208.1
gene_biotype: protein_coding
description:
  Protease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_07430
symbol: rpoS
gene_biotype: protein_coding
description:
  RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the master transcriptional regulator of the stationary phase and the general stress response.


ensembl_gene_id: AAY24_07445
symbol: pcm
gene_biotype: protein_coding
description:
  protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins.


ensembl_gene_id: AAY24_07450
symbol: surE
gene_biotype: protein_coding
description:
  Stationary phase survival protein SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.


ensembl_gene_id: AAY24_07470
symbol: ispF
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP).


ensembl_gene_id: AAY24_07480
symbol: ispD
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_07485
symbol: ftsB
gene_biotype: protein_coding
description:
  Cell division protein FtsB; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic.


ensembl_gene_id: AAY24_07490
symbol: eno
gene_biotype: protein_coding
description:
  Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis.


ensembl_gene_id: AAY24_07495
symbol: kdsA
gene_biotype: protein_coding
description:
  2-dehydro-3-deoxyphosphooctonate aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the KdsA family.


ensembl_gene_id: AAY24_07500
symbol: pyrG
gene_biotype: protein_coding
description:
  CTP synthetase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.


ensembl_gene_id: AAY24_07505
symbol: fnr
gene_biotype: protein_coding
description:
  Transcriptional regulator; Global transcription factor that controls the expression of over 100 target genes in response to anoxia; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_07510
symbol: dnaQ
gene_biotype: protein_coding
description:
  DNA polymerase III subunit epsilon; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease.


ensembl_gene_id: AAY24_07525
symbol: AKH22121.1
gene_biotype: protein_coding
description:
  Lytic transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_07545
symbol: AKH22122.1
gene_biotype: protein_coding
description:
  Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_07550
symbol: AKH20226.1
gene_biotype: protein_coding
description:
  enoyl-ACP reductase; Catalyzes a key regulatory step in fatty acid biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_07570
symbol: AKH20228.1
gene_biotype: protein_coding
description:
  Transcriptional regulator HU subunit alpha; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.


ensembl_gene_id: AAY24_07575
symbol: lon
gene_biotype: protein_coding
description:
  DNA-binding protein; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.


ensembl_gene_id: AAY24_07580
symbol: clpX
gene_biotype: protein_coding
description:
  Clp protease ATP-binding protein; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.


ensembl_gene_id: AAY24_07585
symbol: clpP
gene_biotype: protein_coding
description:
  Clp protease ClpP; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: AAY24_07590
symbol: tig
gene_biotype: protein_coding
description:
  Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.


ensembl_gene_id: AAY24_07600
symbol: hemN
gene_biotype: protein_coding
description:
  Coproporphyrinogen III oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: AAY24_07605
symbol: AKH20234.1
gene_biotype: protein_coding
description:
  General secretion pathway protein GspF; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_07610
symbol: prmB
gene_biotype: protein_coding
description:
  Hypothetical protein; Specifically methylates the 50S ribosomal protein L3 on a specific glutamine residue; Belongs to the protein N5-glutamine methyltransferase family. PrmB subfamily.


ensembl_gene_id: AAY24_07620
symbol: AKH20236.1
gene_biotype: protein_coding
description:
  Rrf2 family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_07630
symbol: trxA
gene_biotype: protein_coding
description:
  Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thioredoxin family.


ensembl_gene_id: AAY24_07635
symbol: adk
gene_biotype: protein_coding
description:
  Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.


ensembl_gene_id: AAY24_07650
symbol: ppsA
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family.


ensembl_gene_id: AAY24_07675
symbol: cysS
gene_biotype: protein_coding
description:
  cysteinyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: AAY24_07680
symbol: AKH20247.1
gene_biotype: protein_coding
description:
  Hypothetical protein; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.


ensembl_gene_id: AAY24_07685
symbol: AKH20248.1
gene_biotype: protein_coding
description:
  Peptidylprolyl isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.


ensembl_gene_id: AAY24_07690
symbol: AKH20249.1
gene_biotype: protein_coding
description:
  UDP-2,3-diacylglucosamine hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_07740
symbol: AKH20256.1
gene_biotype: protein_coding
description:
  Phosphate permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_07770
symbol: rplS
gene_biotype: protein_coding
description:
  50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.


ensembl_gene_id: AAY24_07775
symbol: trmD
gene_biotype: protein_coding
description:
  tRNA (guanine-N1)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.


ensembl_gene_id: AAY24_07785
symbol: rpsP
gene_biotype: protein_coding
description:
  30S ribosomal protein S16; Binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bS16 family.


ensembl_gene_id: AAY24_07790
symbol: ffh
gene_biotype: protein_coding
description:
  Signal recognition particle; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components; Belo [...]


ensembl_gene_id: AAY24_07820
symbol: AKH20271.1
gene_biotype: protein_coding
description:
  Flagellin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_07830
symbol: flgK
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the flagella basal body rod proteins family.


ensembl_gene_id: AAY24_07840
symbol: flgI
gene_biotype: protein_coding
description:
  Flagellar P-ring protein FlgI; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.


ensembl_gene_id: AAY24_07845
symbol: flgH
gene_biotype: protein_coding
description:
  Hypothetical protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.


ensembl_gene_id: AAY24_07850
symbol: flgG
gene_biotype: protein_coding
description:
  Makes up the distal portion of the flagellar basal body rod; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_07855
symbol: flgF
gene_biotype: protein_coding
description:
  Flagellar basal body rod protein FlgF; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the flagella basal body rod proteins family.


ensembl_gene_id: AAY24_07860
symbol: AKH20279.1
gene_biotype: protein_coding
description:
  Flagellar hook protein FlgE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_07870
symbol: flgC
gene_biotype: protein_coding
description:
  Flagellar basal body rod protein FlgC; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the flagella basal body rod proteins family.


ensembl_gene_id: AAY24_07875
symbol: flgB
gene_biotype: protein_coding
description:
  Flagellar basal body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.


ensembl_gene_id: AAY24_07880
symbol: AKH22128.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP.


ensembl_gene_id: AAY24_07910
symbol: AKH20287.1
gene_biotype: protein_coding
description:
  Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_07930
symbol: sucA
gene_biotype: protein_coding
description:
  SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_07935
symbol: odhB
gene_biotype: protein_coding
description:
  Dihydrolipoamide succinyltransferase; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2).


ensembl_gene_id: AAY24_07940
symbol: AKH20292.1
gene_biotype: protein_coding
description:
  Sodium:phosphate symporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_07950
symbol: AKH20294.1
gene_biotype: protein_coding
description:
  Fumarate hydratase; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.


ensembl_gene_id: AAY24_07955
symbol: AKH20295.1
gene_biotype: protein_coding
description:
  BolA family protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the BolA/IbaG family.


ensembl_gene_id: AAY24_07960
symbol: prfC
gene_biotype: protein_coding
description:
  Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.


ensembl_gene_id: AAY24_07965
symbol: rimI
gene_biotype: protein_coding
description:
  Alanine acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_07975
symbol: leuA
gene_biotype: protein_coding
description:
  2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily.


ensembl_gene_id: AAY24_07980
symbol: pssA
gene_biotype: protein_coding
description:
  CDP-diacylglycerol--serine O-phosphatidyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: AAY24_07985
symbol: ilvC
gene_biotype: protein_coding
description:
  Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate.


ensembl_gene_id: AAY24_07990
symbol: ilvN
gene_biotype: protein_coding
description:
  Acetolactate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_07995
symbol: AKH20302.1
gene_biotype: protein_coding
description:
  Acetolactate synthase 3 catalytic subunit; Catalyzes the formation of 2-acetolactate from pyruvate, leucine sensitive; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_08005
symbol: proS
gene_biotype: protein_coding
description:
  proline--tRNA ligase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacy [...]


ensembl_gene_id: AAY24_08010
symbol: fabA
gene_biotype: protein_coding
description:
  3-hydroxydecanoyl-ACP dehydratase; Necessary for the introduction of cis unsaturation into fatty acids. Catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to E- (2)-decenoyl-ACP and then its isomerization to Z-(3)-decenoyl-ACP. Can catalyze the dehydratase reaction for beta-hydroxyacyl-ACPs with saturated chain lengths up to 16:0, being most active on intermediate chain length.


ensembl_gene_id: AAY24_08025
symbol: AKH22133.1
gene_biotype: protein_coding
description:
  Acylphosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_08040
symbol: AKH20307.1
gene_biotype: protein_coding
description:
  Arsenate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_08045
symbol: wrbA
gene_biotype: protein_coding
description:
  NAD(P)H-quinone oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_08055
symbol: AKH22135.1
gene_biotype: protein_coding
description:
  CDP-alcohol phosphatidyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_08065
symbol: purM
gene_biotype: protein_coding
description:
  Phosphoribosylaminoimidazole synthetase; Catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_08070
symbol: purN
gene_biotype: protein_coding
description:
  Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.


ensembl_gene_id: AAY24_08085
symbol: apbC
gene_biotype: protein_coding
description:
  ATPase; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.


ensembl_gene_id: AAY24_08090
symbol: metG
gene_biotype: protein_coding
description:
  methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.


ensembl_gene_id: AAY24_08095
symbol: rsxA
gene_biotype: protein_coding
description:
  Electron transporter RsxA; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.


ensembl_gene_id: AAY24_08100
symbol: rsxB
gene_biotype: protein_coding
description:
  Electron transporter RnfB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.


ensembl_gene_id: AAY24_08115
symbol: rsxG
gene_biotype: protein_coding
description:
  Electron transporter RnfG; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the RnfG family.


ensembl_gene_id: AAY24_08120
symbol: rnfE-2
gene_biotype: protein_coding
description:
  Electron transport complex RsxE subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.


ensembl_gene_id: AAY24_08135
symbol: aroC
gene_biotype: protein_coding
description:
  Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.


ensembl_gene_id: AAY24_08155
symbol: pnp
gene_biotype: protein_coding
description:
  Polynucleotide phosphorylase/polyadenylase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.


ensembl_gene_id: AAY24_08160
symbol: rpsO
gene_biotype: protein_coding
description:
  30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.


ensembl_gene_id: AAY24_08165
symbol: truB
gene_biotype: protein_coding
description:
  Hypothetical protein; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.


ensembl_gene_id: AAY24_08170
symbol: rbfA
gene_biotype: protein_coding
description:
  Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.


ensembl_gene_id: AAY24_08175
symbol: infB
gene_biotype: protein_coding
description:
  Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.


ensembl_gene_id: AAY24_08180
symbol: nusA
gene_biotype: protein_coding
description:
  Transcription elongation factor NusA; Participates in both transcription termination and antitermination.


ensembl_gene_id: AAY24_08185
symbol: rimP
gene_biotype: protein_coding
description:
  Hypothetical protein; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.


ensembl_gene_id: AAY24_08190
symbol: AKH20331.1
gene_biotype: protein_coding
description:
  Arsenic transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_08210
symbol: nuoN
gene_biotype: protein_coding
description:
  NADH:ubiquinone oxidoreductase subunit N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family.


ensembl_gene_id: AAY24_08215
symbol: AKH20335.1
gene_biotype: protein_coding
description:
  NADH:ubiquinone oxidoreductase subunit M; Catalyzes the transfer of electrons from NADH to quinone; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_08220
symbol: nuoL
gene_biotype: protein_coding
description:
  NADH:ubiquinone oxidoreductase subunit L; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_08225
symbol: nuoK
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit K; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family.


ensembl_gene_id: AAY24_08230
symbol: AKH20337.1
gene_biotype: protein_coding
description:
  NADH:ubiquinone oxidoreductase subunit J; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: AAY24_08235
symbol: nuoI
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: AAY24_08240
symbol: nuoH
gene_biotype: protein_coding
description:
  NADH:ubiquinone oxidoreductase subunit H; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone.


ensembl_gene_id: AAY24_08245
symbol: AKH20339.1
gene_biotype: protein_coding
description:
  NADH dehydrogenase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family.


ensembl_gene_id: AAY24_08250
symbol: nuoF
gene_biotype: protein_coding
description:
  NADH dehydrogenase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family.


ensembl_gene_id: AAY24_08260
symbol: nuoD
gene_biotype: protein_coding
description:
  NADH dehydrogenase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family.


ensembl_gene_id: AAY24_08265
symbol: nuoC
gene_biotype: protein_coding
description:
  NADH dehydrogenase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family.


ensembl_gene_id: AAY24_08270
symbol: nuoB
gene_biotype: protein_coding
description:
  NADH dehydrogenase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: AAY24_08275
symbol: nuoA
gene_biotype: protein_coding
description:
  Hypothetical protein; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family.


ensembl_gene_id: AAY24_08285
symbol: secG
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.


ensembl_gene_id: AAY24_08290
symbol: tpiA
gene_biotype: protein_coding
description:
  Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.


ensembl_gene_id: AAY24_08295
symbol: glmM
gene_biotype: protein_coding
description:
  Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.


ensembl_gene_id: AAY24_08300
symbol: folP
gene_biotype: protein_coding
description:
  Catalyzes the formation of dihydropteroate from 2-amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine diphosphate and 4-aminobenzoate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_08305
symbol: hflB
gene_biotype: protein_coding
description:
  ATP-dependent metalloprotease; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family.  In the central section; belongs to the AAA ATPase family.


ensembl_gene_id: AAY24_08310
symbol: rlmE
gene_biotype: protein_coding
description:
  23S rRNA methyltransferase; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit.


ensembl_gene_id: AAY24_08320
symbol: greA
gene_biotype: protein_coding
description:
  Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.


ensembl_gene_id: AAY24_08325
symbol: carB
gene_biotype: protein_coding
description:
  Carbamoyl phosphate synthase large subunit; Four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_08330
symbol: carA
gene_biotype: protein_coding
description:
  Carbamoyl phosphate synthase small subunit; Catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_08335
symbol: AKH20356.1
gene_biotype: protein_coding
description:
  Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_08370
symbol: AKH20363.1
gene_biotype: protein_coding
description:
  Ferrochelatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_08375
symbol: AKH20364.1
gene_biotype: protein_coding
description:
  Universal stress protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_08380
symbol: AKH20365.1
gene_biotype: protein_coding
description:
  Sodium:proton exchanger; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_08395
symbol: AKH20367.1
gene_biotype: protein_coding
description:
  Chlorite dismutase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_08420
symbol: AKH20372.1
gene_biotype: protein_coding
description:
  Molybdopterin oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: AAY24_08445
symbol: mltF
gene_biotype: protein_coding
description:
  Murein transglycosylase; Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella.


ensembl_gene_id: AAY24_08450
symbol: tadA
gene_biotype: protein_coding
description:
  Zinc-binding protein; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: AAY24_08470
symbol: AKH20380.1
gene_biotype: protein_coding
description:
  Fumarate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_08475
symbol: AKH20381.1
gene_biotype: protein_coding
description:
  Cobalt-zinc-cadmium resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_08495
symbol: AKH20383.1
gene_biotype: protein_coding
description:
  Response regulator in two-component regulatory system with BaeS; regulator of RNA synthesis, flagellar biosynthesis, chemotaxis and transport; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_08530
symbol: AKH20387.1
gene_biotype: protein_coding
description:
  acetyl-CoA hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_08550
symbol: guaB
gene_biotype: protein_coding
description:
  Inosine-5-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.


ensembl_gene_id: AAY24_08565
symbol: der
gene_biotype: protein_coding
description:
  GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.


ensembl_gene_id: AAY24_08580
symbol: hisS
gene_biotype: protein_coding
description:
  Histidinol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_08595
symbol: rlmN
gene_biotype: protein_coding
description:
  Ribosomal RNA large subunit methyltransferase N; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family.


ensembl_gene_id: AAY24_08600
symbol: ndk
gene_biotype: protein_coding
description:
  Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.


ensembl_gene_id: AAY24_08605
symbol: relA
gene_biotype: protein_coding
description:
  (p)ppGpp synthetase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.


ensembl_gene_id: AAY24_08620
symbol: fdx
gene_biotype: protein_coding
description:
  2Fe-2S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_08625
symbol: hscA
gene_biotype: protein_coding
description:
  Chaperone protein HscA; Chaperone involved in the maturation of iron-sulfur cluster- containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB.


ensembl_gene_id: AAY24_08630
symbol: AKH20406.1
gene_biotype: protein_coding
description:
  Cysteine desulfurase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_08635
symbol: iscA
gene_biotype: protein_coding
description:
  Iron-sulfur cluster assembly protein; Is able to transfer iron-sulfur clusters to apo-ferredoxin. Multiple cycles of [2Fe2S] cluster formation and transfer are observed, suggesting that IscA acts catalytically. Recruits intracellular free iron so as to provide iron for the assembly of transient iron-sulfur cluster in IscU in the presence of IscS, L-cysteine and the thioredoxin reductase system; Belongs to the HesB/IscA family.


ensembl_gene_id: AAY24_08640
symbol: iscU
gene_biotype: protein_coding
description:
  Scaffolding protein; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters.


ensembl_gene_id: AAY24_08645
symbol: iscS
gene_biotype: protein_coding
description:
  Cysteine desulfurase; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins.


ensembl_gene_id: AAY24_08650
symbol: iscR
gene_biotype: protein_coding
description:
  Hypothetical protein; Regulates the transcription of several operons and genes involved in the biogenesis of Fe-S clusters and Fe-S-containing proteins.


ensembl_gene_id: AAY24_08655
symbol: cysE
gene_biotype: protein_coding
description:
  Serine acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_08660
symbol: trmJ
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA.


ensembl_gene_id: AAY24_08665
symbol: suhB
gene_biotype: protein_coding
description:
  Inositol monophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the inositol monophosphatase superfamily.


ensembl_gene_id: AAY24_08675
symbol: secF
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: AAY24_08680
symbol: secD
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: AAY24_08685
symbol: yajC
gene_biotype: protein_coding
description:
  Preprotein translocase subunit YidC; The SecYEG-SecDF-YajC-YidC holo-translocon (HTL) protein secretase/insertase is a supercomplex required for protein secretion, insertion of proteins into membranes, and assembly of membrane protein complexes. While the SecYEG complex is essential for assembly of a number of proteins and complexes, the SecDF-YajC-YidC subcomplex facilitates these functions.


ensembl_gene_id: AAY24_08690
symbol: tgt
gene_biotype: protein_coding
description:
  Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form t [...]


ensembl_gene_id: AAY24_08695
symbol: queA
gene_biotype: protein_coding
description:
  S-adenosylmethionine tRNA ribosyltransferase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).


ensembl_gene_id: AAY24_08730
symbol: AKH22150.1
gene_biotype: protein_coding
description:
  Fatty acid desaturase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_08765
symbol: AKH22152.1
gene_biotype: protein_coding
description:
  isovaleryl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_08785
symbol: AKH20430.1
gene_biotype: protein_coding
description:
  Thiosulfate sulfurtransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_08790
symbol: psd
gene_biotype: protein_coding
description:
  Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).


ensembl_gene_id: AAY24_08800
symbol: efp
gene_biotype: protein_coding
description:
  Elongation factor P; Involved in peptide bond synthesis. Alleviates ribosome stalling that occurs when 3 or more consecutive Pro residues or the sequence PPG is present in a protein, possibly by augmenting the peptidyl transferase activity of the ribosome. Modification of Lys-34 is required for alleviation; Belongs to the elongation factor P family.


ensembl_gene_id: AAY24_08865
symbol: AKH20442.1
gene_biotype: protein_coding
description:
  Chromosome partitioning protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_08885
symbol: AKH20446.1
gene_biotype: protein_coding
description:
  RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: AAY24_08890
symbol: AKH20447.1
gene_biotype: protein_coding
description:
  SCP-2 sterol transfer family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_08895
symbol: AKH20448.1
gene_biotype: protein_coding
description:
  Dynamin family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_08905
symbol: AKH20450.1
gene_biotype: protein_coding
description:
  NUDIX hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Nudix hydrolase family.


ensembl_gene_id: AAY24_08910
symbol: nadA
gene_biotype: protein_coding
description:
  Quinolinate synthetase; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.


ensembl_gene_id: AAY24_08915
symbol: AKH20452.1
gene_biotype: protein_coding
description:
  Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_08945
symbol: AKH20457.1
gene_biotype: protein_coding
description:
  Nitric oxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heme-copper respiratory oxidase family.


ensembl_gene_id: AAY24_08955
symbol: AKH20458.1
gene_biotype: protein_coding
description:
  Cytochrome C552; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_08965
symbol: AKH20460.1
gene_biotype: protein_coding
description:
  Protein nirF; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_08975
symbol: AKH20461.1
gene_biotype: protein_coding
description:
  Protein nirL; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_08980
symbol: AKH22161.1
gene_biotype: protein_coding
description:
  Protein nirG; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_08985
symbol: AKH20462.1
gene_biotype: protein_coding
description:
  Protein nirH; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_08995
symbol: AKH20464.1
gene_biotype: protein_coding
description:
  Cytochrome Cbb3; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_09000
symbol: AKH20465.1
gene_biotype: protein_coding
description:
  Protein nirD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_09020
symbol: AKH20468.1
gene_biotype: protein_coding
description:
  Nitric oxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_09025
symbol: AKH20469.1
gene_biotype: protein_coding
description:
  Cytochrome C oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_09030
symbol: AKH20470.1
gene_biotype: protein_coding
description:
  O-succinylhomoserine sulfhydrylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_09055
symbol: AKH20475.1
gene_biotype: protein_coding
description:
  Ankyrin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_09060
symbol: AKH20476.1
gene_biotype: protein_coding
description:
  Sulfide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_09085
symbol: AKH20481.1
gene_biotype: protein_coding
description:
  TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_09140
symbol: moaA-2
gene_biotype: protein_coding
description:
  Molybdenum cofactor biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.


ensembl_gene_id: AAY24_09180
symbol: AKH20494.1
gene_biotype: protein_coding
description:
  Molybdopterin-guanine dinucleotide biosynthesis protein B; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_09215
symbol: ptsP
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate-protein phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the PEP-utilizing enzyme family.


ensembl_gene_id: AAY24_09220
symbol: rppH
gene_biotype: protein_coding
description:
  RNA pyrophosphohydrolase; Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage; Belongs to the Nudix hydrolase family. RppH subfamily.


ensembl_gene_id: AAY24_09225
symbol: AKH20503.1
gene_biotype: protein_coding
description:
  Phosphoserine phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_09240
symbol: AKH22166.1
gene_biotype: protein_coding
description:
  NADP oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_09255
symbol: AKH20508.1
gene_biotype: protein_coding
description:
  NADP oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.


ensembl_gene_id: AAY24_09265
symbol: clpB
gene_biotype: protein_coding
description:
  Protein disaggregation chaperone; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.


ensembl_gene_id: AAY24_09270
symbol: AKH20511.1
gene_biotype: protein_coding
description:
  Glycerol acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_09275
symbol: def
gene_biotype: protein_coding
description:
  Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.


ensembl_gene_id: AAY24_09280
symbol: AKH20513.1
gene_biotype: protein_coding
description:
  Amino acid-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_09290
symbol: rluD
gene_biotype: protein_coding
description:
  Hypothetical protein; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: AAY24_09295
symbol: bamD
gene_biotype: protein_coding
description:
  Competence protein ComL; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.


ensembl_gene_id: AAY24_09300
symbol: AKH20517.1
gene_biotype: protein_coding
description:
  Nitrogen regulatory protein P-II 1; Indirectly regulates nitrogen metabolism; at high nitrogen levels P-II prevents the phosphorylation of NR-I, the transcriptional activator of the glutamine synthetase gene (glnA); at low nitrogen levels P-II is uridylylated to form PII-UMP and interacts with an adenylyltransferase (GlnE) that activates GlnA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_09305
symbol: nadE
gene_biotype: protein_coding
description:
  NAD synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.


ensembl_gene_id: AAY24_09310
symbol: sucD
gene_biotype: protein_coding
description:
  succinyl-CoA synthetase subunit alpha; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.


ensembl_gene_id: AAY24_09315
symbol: sucC
gene_biotype: protein_coding
description:
  succinyl-CoA synthetase subunit beta; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.


ensembl_gene_id: AAY24_09345
symbol: pilB
gene_biotype: protein_coding
description:
  General secretion pathway protein GspE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_09350
symbol: AKH20526.1
gene_biotype: protein_coding
description:
  Type II secretion system protein F; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_09355
symbol: AKH20527.1
gene_biotype: protein_coding
description:
  Methyltransferase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.


ensembl_gene_id: AAY24_09360
symbol: AKH20528.1
gene_biotype: protein_coding
description:
  dephospho-CoA kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_09365
symbol: zapD
gene_biotype: protein_coding
description:
  Hypothetical protein; Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity.


ensembl_gene_id: AAY24_09375
symbol: argJ
gene_biotype: protein_coding
description:
  Ornithine acetyltransferase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family.


ensembl_gene_id: AAY24_09380
symbol: secA
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. Belongs to the SecA family.


ensembl_gene_id: AAY24_09395
symbol: lpxC
gene_biotype: protein_coding
description:
  UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the LpxC family.


ensembl_gene_id: AAY24_09400
symbol: ftsZ
gene_biotype: protein_coding
description:
  Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.


ensembl_gene_id: AAY24_09405
symbol: ftsA
gene_biotype: protein_coding
description:
  Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.


ensembl_gene_id: AAY24_09415
symbol: ddl
gene_biotype: protein_coding
description:
  D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.


ensembl_gene_id: AAY24_09430
symbol: murG
gene_biotype: protein_coding
description:
  UDP-diphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; N-acetylglucosaminyl transferase; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_09435
symbol: ftsW
gene_biotype: protein_coding
description:
  Cell division protein FtsW; Peptidoglycan polymerase that is essential for cell division. Belongs to the SEDS family. FtsW subfamily.


ensembl_gene_id: AAY24_09440
symbol: murD
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_09445
symbol: mraY
gene_biotype: protein_coding
description:
  phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.


ensembl_gene_id: AAY24_09460
symbol: ftsI
gene_biotype: protein_coding
description:
  Cell division protein; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum.


ensembl_gene_id: AAY24_09465
symbol: ftsL
gene_biotype: protein_coding
description:
  Cell division protein FtsL; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic.


ensembl_gene_id: AAY24_09470
symbol: rsmH
gene_biotype: protein_coding
description:
  16S rRNA methyltransferase; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.


ensembl_gene_id: AAY24_09475
symbol: mraZ
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MraZ family.


ensembl_gene_id: AAY24_09495
symbol: argD
gene_biotype: protein_coding
description:
  Acetylornithine aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.


ensembl_gene_id: AAY24_09500
symbol: argF
gene_biotype: protein_coding
description:
  Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.


ensembl_gene_id: AAY24_09530
symbol: purC
gene_biotype: protein_coding
description:
  Phosphoribosylaminoimidazole-succinocarboxamide synthase; Catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_09540
symbol: srkA
gene_biotype: protein_coding
description:
  Serine/threonine protein kinase; A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response.


ensembl_gene_id: AAY24_09585
symbol: AKH20563.1
gene_biotype: protein_coding
description:
  Fructose-1,6-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis.


ensembl_gene_id: AAY24_09590
symbol: pyk
gene_biotype: protein_coding
description:
  Pyruvate kinase; Catalyzes the formation of phosphoenolpyruvate from pyruvate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_09595
symbol: pgk
gene_biotype: protein_coding
description:
  Phosphoglycerate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the phosphoglycerate kinase family.


ensembl_gene_id: AAY24_09600
symbol: gap
gene_biotype: protein_coding
description:
  Glyceraldehyde-3-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: AAY24_09605
symbol: tkt
gene_biotype: protein_coding
description:
  Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.


ensembl_gene_id: AAY24_09615
symbol: metK
gene_biotype: protein_coding
description:
  S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.


ensembl_gene_id: AAY24_09620
symbol: ahcY
gene_biotype: protein_coding
description:
  S-adenosyl-L-homocysteine hydrolase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.


ensembl_gene_id: AAY24_09625
symbol: metF
gene_biotype: protein_coding
description:
  5,10-methylenetetrahydrofolate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the methylenetetrahydrofolate reductase family.


ensembl_gene_id: AAY24_09635
symbol: bioA
gene_biotype: protein_coding
description:
  Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. BioA subfamily.


ensembl_gene_id: AAY24_09670
symbol: AKH22177.1
gene_biotype: protein_coding
description:
  Flagellar motor protein MotA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_09675
symbol: AKH20579.1
gene_biotype: protein_coding
description:
  Iron ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_09680
symbol: AKH20580.1
gene_biotype: protein_coding
description:
  Iron-siderophore ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_09705
symbol: ttcA
gene_biotype: protein_coding
description:
  tRNA 2-thiocytidine biosynthesis protein TtcA; Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine/cysteine desulfurase (IscS) system.


ensembl_gene_id: AAY24_09735
symbol: AKH20589.1
gene_biotype: protein_coding
description:
  Pilus assembly protein PilG; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_09750
symbol: gshB
gene_biotype: protein_coding
description:
  Glutathione synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic GSH synthase family.


ensembl_gene_id: AAY24_09755
symbol: AKH20593.1
gene_biotype: protein_coding
description:
  Thiamine biosynthesis protein ApbE; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family.


ensembl_gene_id: AAY24_09765
symbol: AKH20595.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0301 (AlgH) family.


ensembl_gene_id: AAY24_09770
symbol: ruvX
gene_biotype: protein_coding
description:
  Holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.


ensembl_gene_id: AAY24_09780
symbol: pyrB
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.


ensembl_gene_id: AAY24_09785
symbol: AKH20598.1
gene_biotype: protein_coding
description:
  Dihydroorotase; Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_09795
symbol: AKH20599.1
gene_biotype: protein_coding
description:
  Twitching motility protein PilT; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_09810
symbol: proC
gene_biotype: protein_coding
description:
  Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.


ensembl_gene_id: AAY24_09820
symbol: AKH20603.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0235 family.


ensembl_gene_id: AAY24_09830
symbol: AKH20605.1
gene_biotype: protein_coding
description:
  Orotate phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_09840
symbol: AKH20607.1
gene_biotype: protein_coding
description:
  Calcium/sodium:proton antiporter; YrbG; inner membrane protein involved in cell envelope integrity; putative sodium ion/calcium ion exchanger; in E. coli it is non essential for cell viability; member of the YRBG family of cation/Ca2+ exchangers; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_09845
symbol: AKH20608.1
gene_biotype: protein_coding
description:
  D-arabinose 5-phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_09850
symbol: kdsC
gene_biotype: protein_coding
description:
  3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8- phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate; Belongs to the KdsC family.


ensembl_gene_id: AAY24_09860
symbol: lptA
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm.


ensembl_gene_id: AAY24_09865
symbol: lptB
gene_biotype: protein_coding
description:
  Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_09870
symbol: AKH20612.1
gene_biotype: protein_coding
description:
  RNA polymerase factor sigma-54; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living a [...]


ensembl_gene_id: AAY24_09880
symbol: AKH20614.1
gene_biotype: protein_coding
description:
  PTS sugar transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_09890
symbol: AKH22184.1
gene_biotype: protein_coding
description:
  Phosphocarrier protein HPr; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_09895
symbol: ptsP-2
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate-protein phosphotransferase; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr).


ensembl_gene_id: AAY24_09905
symbol: ppnP
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions.


ensembl_gene_id: AAY24_09920
symbol: AKH20621.1
gene_biotype: protein_coding
description:
  Peptidylprolyl isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_09950
symbol: mutM
gene_biotype: protein_coding
description:
  5-hydroxymethyluracil DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates.


ensembl_gene_id: AAY24_09970
symbol: fdhD
gene_biotype: protein_coding
description:
  Formate dehydrogenase; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.


ensembl_gene_id: AAY24_09975
symbol: mobA
gene_biotype: protein_coding
description:
  Molybdopterin-guanine dinucleotide biosynthesis protein A; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor; Belongs to the MobA family.


ensembl_gene_id: AAY24_10000
symbol: AKH20633.1
gene_biotype: protein_coding
description:
  RpiR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_10005
symbol: AKH20634.1
gene_biotype: protein_coding
description:
  Arginase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_10010
symbol: AKH20635.1
gene_biotype: protein_coding
description:
  Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_10020
symbol: AKH20637.1
gene_biotype: protein_coding
description:
  Polar amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_10025
symbol: AKH20638.1
gene_biotype: protein_coding
description:
  Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_10030
symbol: AKH20639.1
gene_biotype: protein_coding
description:
  Amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_10035
symbol: AKH20640.1
gene_biotype: protein_coding
description:
  Endoribonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_10040
symbol: AKH20641.1
gene_biotype: protein_coding
description:
  Acetylornithine deacetylase; Catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_10060
symbol: AKH20643.1
gene_biotype: protein_coding
description:
  Glutamate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_10090
symbol: AKH20648.1
gene_biotype: protein_coding
description:
  NAD-dependent deacetylase; Modulates the activities of several enzymes which are inactive in their acetylated form; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_10100
symbol: AKH20650.1
gene_biotype: protein_coding
description:
  2-oxoglutarate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_10115
symbol: coaD
gene_biotype: protein_coding
description:
  Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.


ensembl_gene_id: AAY24_10125
symbol: AKH20655.1
gene_biotype: protein_coding
description:
  Zinc protease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_10130
symbol: AKH20656.1
gene_biotype: protein_coding
description:
  Peptidase M16; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_10135
symbol: ftsY
gene_biotype: protein_coding
description:
  Cell division protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components.


ensembl_gene_id: AAY24_10145
symbol: AKH20659.1
gene_biotype: protein_coding
description:
  Cell division protein; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.


ensembl_gene_id: AAY24_10150
symbol: rpoH
gene_biotype: protein_coding
description:
  RNA polymerase factor sigma-32; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes.


ensembl_gene_id: AAY24_10165
symbol: AKH20663.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: AAY24_10200
symbol: paaZ
gene_biotype: protein_coding
description:
  enoyl-CoA hydratase; Catalyzes the ring cleavage reaction in phenylacetate degradation and the formation of 3-hydroxyacyl-CoA from crotonyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_10205
symbol: AKH20669.1
gene_biotype: protein_coding
description:
  2,3-dehydroadipyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family.


ensembl_gene_id: AAY24_10210
symbol: AKH20670.1
gene_biotype: protein_coding
description:
  enoyl-CoA hydratase; Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_10220
symbol: pcaF
gene_biotype: protein_coding
description:
  Catalyzes the thiolytic cleavage of beta-ketoadipyl-CoA to succinate and acetyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family.


ensembl_gene_id: AAY24_10225
symbol: paaF
gene_biotype: protein_coding
description:
  phenylacetate--CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).


ensembl_gene_id: AAY24_10250
symbol: AKH20677.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.


ensembl_gene_id: AAY24_10270
symbol: AKH22192.1
gene_biotype: protein_coding
description:
  Indolepyruvate ferredoxin oxidoreductase; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates.


ensembl_gene_id: AAY24_10275
symbol: AKH22193.1
gene_biotype: protein_coding
description:
  Indolepyruvate oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_10280
symbol: AKH20680.1
gene_biotype: protein_coding
description:
  Phospho-2-dehydro-3-deoxyheptonate aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_10285
symbol: AKH20681.1
gene_biotype: protein_coding
description:
  Phospho-2-dehydro-3-deoxyheptonate aldolase; Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino- heptulosonate-7-phosphate (DAHP).


ensembl_gene_id: AAY24_10290
symbol: AKH20682.1
gene_biotype: protein_coding
description:
  YbaK/prolyl-tRNA synthetase associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_10325
symbol: AKH20685.1
gene_biotype: protein_coding
description:
  Dethiobiotin synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_10330
symbol: bioC
gene_biotype: protein_coding
description:
  malonyl-CoA O-methyltransferase; Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl-L- methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway.


ensembl_gene_id: AAY24_10335
symbol: bioH
gene_biotype: protein_coding
description:
  Transporter; The physiological role of BioH is to remove the methyl group introduced by BioC when the pimeloyl moiety is complete. It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway through the hydrolysis of the ester bonds of pimeloyl-ACP esters.


ensembl_gene_id: AAY24_10340
symbol: bioF
gene_biotype: protein_coding
description:
  8-amino-7-oxononanoate synthase; Catalyzes the decarboxylative condensation of pimeloyl-[acyl- carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide.


ensembl_gene_id: AAY24_10345
symbol: bioB
gene_biotype: protein_coding
description:
  Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.


ensembl_gene_id: AAY24_10360
symbol: hisG-2
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Long subfamily.


ensembl_gene_id: AAY24_10365
symbol: phaC
gene_biotype: protein_coding
description:
  Poly-beta-hydroxybutyrate polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_10390
symbol: dsrA
gene_biotype: protein_coding
description:
  Sulfite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_10400
symbol: ubiA
gene_biotype: protein_coding
description:
  4-hydroxybenzoate polyprenyltransferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate.


ensembl_gene_id: AAY24_10405
symbol: AKH20701.1
gene_biotype: protein_coding
description:
  Chorismate--pyruvate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_10410
symbol: recG
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.


ensembl_gene_id: AAY24_10435
symbol: rpoZ
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.


ensembl_gene_id: AAY24_10460
symbol: rph
gene_biotype: protein_coding
description:
  Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation.


ensembl_gene_id: AAY24_10465
symbol: AKH20710.1
gene_biotype: protein_coding
description:
  Omega amino acid--pyruvate aminotransferase; Catalyzes the formation of pyruvate and beta-alanine from L-alanine and 3-oxopropanoate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: AAY24_10485
symbol: AKH20713.1
gene_biotype: protein_coding
description:
  Thiol:disulfide interchange protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_10495
symbol: ccmE
gene_biotype: protein_coding
description:
  Cytochrome C biogenesis protein CcmE; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. Belongs to the CcmE/CycJ family.


ensembl_gene_id: AAY24_10500
symbol: ccmC
gene_biotype: protein_coding
description:
  Heme ABC transporter permease; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmC/CycZ/HelC family.


ensembl_gene_id: AAY24_10505
symbol: ccmB
gene_biotype: protein_coding
description:
  Heme ABC transporter permease; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmB/CycW/HelB family.


ensembl_gene_id: AAY24_10510
symbol: ccmA
gene_biotype: protein_coding
description:
  Heme ABC transporter ATP-binding protein; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family.


ensembl_gene_id: AAY24_10515
symbol: AKH20719.1
gene_biotype: protein_coding
description:
  Nucleoside-triphosphate diphosphatase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.


ensembl_gene_id: AAY24_10525
symbol: AKH20720.1
gene_biotype: protein_coding
description:
  CoA-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CoA-transferase III family.


ensembl_gene_id: AAY24_10535
symbol: AKH20721.1
gene_biotype: protein_coding
description:
  2-dehydropantoate 2-reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_10560
symbol: ylqF
gene_biotype: protein_coding
description:
  GTPase; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.


ensembl_gene_id: AAY24_10565
symbol: nhaA
gene_biotype: protein_coding
description:
  pH-dependent sodium/proton antiporter; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family.


ensembl_gene_id: AAY24_10575
symbol: AKH20726.1
gene_biotype: protein_coding
description:
  Signal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_10625
symbol: AKH22202.1
gene_biotype: protein_coding
description:
  Secretion system protein F; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_10680
symbol: pstB
gene_biotype: protein_coding
description:
  Phosphate ABC transporter ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.


ensembl_gene_id: AAY24_10685
symbol: pstA
gene_biotype: protein_coding
description:
  Phosphate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_10690
symbol: pstC
gene_biotype: protein_coding
description:
  Phosphate ABC transporter permease; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: AAY24_10695
symbol: AKH20742.1
gene_biotype: protein_coding
description:
  Phosphate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_10715
symbol: AKH22206.1
gene_biotype: protein_coding
description:
  Decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LOG family.


ensembl_gene_id: AAY24_10720
symbol: rep
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase Rep; Rep helicase is a single-stranded DNA-dependent ATPase involved in DNA replication; it can initiate unwinding at a nick in the DNA. It binds to the single-stranded DNA and acts in a progressive fashion along the DNA in the 3' to 5' direction.


ensembl_gene_id: AAY24_10740
symbol: AKH22207.1
gene_biotype: protein_coding
description:
  Transcriptional regulatory protein AruR; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_10755
symbol: AKH20750.1
gene_biotype: protein_coding
description:
  Catalyzes the reduction of trimethylamine-N-oxide to form trimethylamine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_10760
symbol: AKH20751.1
gene_biotype: protein_coding
description:
  Haloalkane dehalogenase; Catalyzes the cleavage of carbon-halogen bonds in aliphatic compounds forming a primary alcohol and a halide; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_10820
symbol: AKH20759.1
gene_biotype: protein_coding
description:
  Alanine--glyoxylate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_10825
symbol: aceK
gene_biotype: protein_coding
description:
  Isocitrate dehydrogenase; Bifunctional enzyme which can phosphorylate or dephosphorylate isocitrate dehydrogenase (IDH) on a specific serine residue. This is a regulatory mechanism which enables bacteria to bypass the Krebs cycle via the glyoxylate shunt in response to the source of carbon. When bacteria are grown on glucose, IDH is fully active and unphosphorylated, but when grown on acetate or ethanol, the activity of IDH declines drastically concomitant with its phosphorylation.


ensembl_gene_id: AAY24_10835
symbol: aceA
gene_biotype: protein_coding
description:
  Isocitrate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_10840
symbol: AKH20762.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions.


ensembl_gene_id: AAY24_10860
symbol: AKH20766.1
gene_biotype: protein_coding
description:
  Sodium:solute symporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.


ensembl_gene_id: AAY24_10880
symbol: phbB
gene_biotype: protein_coding
description:
  acetoacetyl-CoA reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_10890
symbol: yidD
gene_biotype: protein_coding
description:
  Hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.


ensembl_gene_id: AAY24_10895
symbol: fur-2
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Fur family.


ensembl_gene_id: AAY24_10950
symbol: menB
gene_biotype: protein_coding
description:
  Dihydroxynaphthoic acid synthetase; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA).


ensembl_gene_id: AAY24_10955
symbol: menA
gene_biotype: protein_coding
description:
  1,4-dihydroxy-2-naphthoate prenyltransferase; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily.


ensembl_gene_id: AAY24_11020
symbol: AKH20789.1
gene_biotype: protein_coding
description:
  DNA helicase II; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_11035
symbol: AKH20792.1
gene_biotype: protein_coding
description:
  N-acylneuraminate-9-phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_11050
symbol: ubiX
gene_biotype: protein_coding
description:
  Aromatic acid decarboxylase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.


ensembl_gene_id: AAY24_11055
symbol: mpl
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase; Reutilizes the intact tripeptide L-alanyl-gamma-D-glutamyl- meso-diaminopimelate by linking it to UDP-N-acetylmuramate. Belongs to the MurCDEF family. Mpl subfamily.


ensembl_gene_id: AAY24_11075
symbol: AKH20799.1
gene_biotype: protein_coding
description:
  Magnesium/cobalt efflux protein CorC; Involved in the transport of magnesium and cobalt ions; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_11090
symbol: miaB
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.


ensembl_gene_id: AAY24_11130
symbol: rsmA
gene_biotype: protein_coding
description:
  Ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.


ensembl_gene_id: AAY24_11135
symbol: lon-2
gene_biotype: protein_coding
description:
  Lon protease; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.


ensembl_gene_id: AAY24_11140
symbol: AKH20810.1
gene_biotype: protein_coding
description:
  Sulfur globule protein CV1; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_11145
symbol: erpA
gene_biotype: protein_coding
description:
  Iron--sulfur cluster insertion protein ErpA; Required for insertion of 4Fe-4S clusters for at least IspG.


ensembl_gene_id: AAY24_11150
symbol: AKH20812.1
gene_biotype: protein_coding
description:
  Cell shape determination protein CcmA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_11160
symbol: argC
gene_biotype: protein_coding
description:
  N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.


ensembl_gene_id: AAY24_11175
symbol: AKH22220.1
gene_biotype: protein_coding
description:
  [Fe-S]-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HesB/IscA family.


ensembl_gene_id: AAY24_11185
symbol: AKH22221.1
gene_biotype: protein_coding
description:
  Phosphomethylpyrimidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_11190
symbol: AKH20817.1
gene_biotype: protein_coding
description:
  Thiamine-phosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_11195
symbol: hemL
gene_biotype: protein_coding
description:
  Glutamate-1-semialdehyde aminotransferase; Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_11220
symbol: AKH20823.1
gene_biotype: protein_coding
description:
  Multidrug ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_11250
symbol: AKH20828.1
gene_biotype: protein_coding
description:
  Cytochrome C553; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_11275
symbol: AKH22223.1
gene_biotype: protein_coding
description:
  Deoxyguanosinetriphosphate triphosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_11280
symbol: AKH20833.1
gene_biotype: protein_coding
description:
  protein-L-isoaspartate O-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_11290
symbol: AKH20834.1
gene_biotype: protein_coding
description:
  3-deoxy-D-manno-octulosonic acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family.


ensembl_gene_id: AAY24_11295
symbol: AKH20835.1
gene_biotype: protein_coding
description:
  Capsular biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_11300
symbol: AKH20836.1
gene_biotype: protein_coding
description:
  UDP-phosphate galactose phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_11305
symbol: AKH20837.1
gene_biotype: protein_coding
description:
  NAD-dependent dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_11310
symbol: AKH20838.1
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 2-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_11315
symbol: AKH20839.1
gene_biotype: protein_coding
description:
  UDP-glucose 4-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_11320
symbol: AKH20840.1
gene_biotype: protein_coding
description:
  dTDP-4-dehydrorhamnose reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_11340
symbol: AKH20843.1
gene_biotype: protein_coding
description:
  Glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_11370
symbol: AKH20849.1
gene_biotype: protein_coding
description:
  Aminotransferase DegT; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_11395
symbol: msbA
gene_biotype: protein_coding
description:
  Lipid transporter ATP-binding/permease; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation.


ensembl_gene_id: AAY24_11440
symbol: ilvE
gene_biotype: protein_coding
description:
  Branched-chain amino acid aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: AAY24_11445
symbol: glnE
gene_biotype: protein_coding
description:
  Glutamine-synthetase adenylyltransferase; Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transducti [...]


ensembl_gene_id: AAY24_11450
symbol: groEL
gene_biotype: protein_coding
description:
  Molecular chaperone GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.


ensembl_gene_id: AAY24_11455
symbol: groS
gene_biotype: protein_coding
description:
  Molecular chaperone GroES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.


ensembl_gene_id: AAY24_11460
symbol: AKH22226.1
gene_biotype: protein_coding
description:
  Mannose-1-phosphate guanylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_11465
symbol: rho
gene_biotype: protein_coding
description:
  Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.


ensembl_gene_id: AAY24_11475
symbol: rhlB
gene_biotype: protein_coding
description:
  RNA helicase; DEAD-box RNA helicase involved in RNA degradation. Has RNA- dependent ATPase activity and unwinds double-stranded RNA. Belongs to the DEAD box helicase family. RhlB subfamily.


ensembl_gene_id: AAY24_11485
symbol: AKH20871.1
gene_biotype: protein_coding
description:
  Haloacid dehalogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_11490
symbol: nudE
gene_biotype: protein_coding
description:
  ADP-ribose diphosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_11505
symbol: AKH20875.1
gene_biotype: protein_coding
description:
  HNH endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_11510
symbol: AKH20876.1
gene_biotype: protein_coding
description:
  RNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_11515
symbol: AKH20877.1
gene_biotype: protein_coding
description:
  NADPH-dependent FMN reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_11610
symbol: AKH20888.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes.


ensembl_gene_id: AAY24_11615
symbol: AKH22233.1
gene_biotype: protein_coding
description:
  DNA glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_11650
symbol: trmB
gene_biotype: protein_coding
description:
  tRNA (guanine-N7)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.


ensembl_gene_id: AAY24_11685
symbol: AKH20898.1
gene_biotype: protein_coding
description:
  Stringent starvation protein A; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_11695
symbol: AKH20900.1
gene_biotype: protein_coding
description:
  Cytochrome B; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.


ensembl_gene_id: AAY24_11700
symbol: petA
gene_biotype: protein_coding
description:
  Hypothetical protein; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.


ensembl_gene_id: AAY24_11705
symbol: AKH22237.1
gene_biotype: protein_coding
description:
  Metal-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_11710
symbol: AKH20902.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S1C family.


ensembl_gene_id: AAY24_11715
symbol: hisD
gene_biotype: protein_coding
description:
  Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.


ensembl_gene_id: AAY24_11720
symbol: hisG
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase catalytic subunit; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Short subfamily.


ensembl_gene_id: AAY24_11725
symbol: murA
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.


ensembl_gene_id: AAY24_11765
symbol: pyrE
gene_biotype: protein_coding
description:
  Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).


ensembl_gene_id: AAY24_11775
symbol: slmA
gene_biotype: protein_coding
description:
  TetR family transcriptional regulator; Required for nucleoid occlusion (NO) phenomenon, which prevents Z-ring formation and cell division over the nucleoid. Acts as a DNA-associated cell division inhibitor that binds simultaneously chromosomal DNA and FtsZ, and disrupts the assembly of FtsZ polymers. SlmA-DNA-binding sequences (SBS) are dispersed on non-Ter regions of the chromosome, preventing FtsZ polymerization at these regions.


ensembl_gene_id: AAY24_11780
symbol: argB
gene_biotype: protein_coding
description:
  Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.


ensembl_gene_id: AAY24_11790
symbol: dut
gene_biotype: protein_coding
description:
  Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family.


ensembl_gene_id: AAY24_11795
symbol: coaBC
gene_biotype: protein_coding
description:
  Phosphopantothenoylcysteine decarboxylase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.


ensembl_gene_id: AAY24_11800
symbol: AKH20913.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0758 family.


ensembl_gene_id: AAY24_11805
symbol: rpmB
gene_biotype: protein_coding
description:
  50S ribosomal protein L28; Required for 70S ribosome assembly; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL28 family.


ensembl_gene_id: AAY24_11810
symbol: rpmG
gene_biotype: protein_coding
description:
  50S ribosomal protein L33; In Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_11820
symbol: leuS
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: AAY24_11830
symbol: AKH20919.1
gene_biotype: protein_coding
description:
  DNA polymerase III subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_11835
symbol: proA
gene_biotype: protein_coding
description:
  Gamma-glutamyl phosphate reductase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.


ensembl_gene_id: AAY24_11840
symbol: AKH20921.1
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide adenylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_11845
symbol: rsfS
gene_biotype: protein_coding
description:
  Ribosome-associated protein IOJAP; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.


ensembl_gene_id: AAY24_11860
symbol: rlmH
gene_biotype: protein_coding
description:
  50S rRNA methyltransferase; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.


ensembl_gene_id: AAY24_11865
symbol: AKH20926.1
gene_biotype: protein_coding
description:
  Septum formation protein Maf; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.


ensembl_gene_id: AAY24_11870
symbol: AKH20927.1
gene_biotype: protein_coding
description:
  Involved in the processing of the 5'end of 16S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_11885
symbol: tldD
gene_biotype: protein_coding
description:
  Protease TldD; Responsible for the proteolytic maturation of the E. coli pMccB17 plasmid-encoded microcin B17, an exported protein that targets the essential topoisomerase II DNA gyrase; degrades the E. coli plasmid F-encoded CcdA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_11890
symbol: pmbA
gene_biotype: protein_coding
description:
  Peptidase PmbA; Protease involved in proteolytic processing of the antibiotic Microcin B17 and in sensitivity to the DNA gyrase inhibitor LetD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_11900
symbol: pfp
gene_biotype: protein_coding
description:
  6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP- PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions.


ensembl_gene_id: AAY24_11905
symbol: ppa
gene_biotype: protein_coding
description:
  Inorganic pyrophosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.


ensembl_gene_id: AAY24_11910
symbol: AKH20935.1
gene_biotype: protein_coding
description:
  Metallophosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_11915
symbol: moaC
gene_biotype: protein_coding
description:
  Molybdenum cofactor biosynthesis protein MoaC; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family.


ensembl_gene_id: AAY24_11920
symbol: AKH20937.1
gene_biotype: protein_coding
description:
  Hemerythrin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_11925
symbol: engB
gene_biotype: protein_coding
description:
  GTP-binding protein; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.


ensembl_gene_id: AAY24_11930
symbol: polA
gene_biotype: protein_coding
description:
  DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.


ensembl_gene_id: AAY24_11965
symbol: AKH20945.1
gene_biotype: protein_coding
description:
  Ammonium transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_11985
symbol: AKH20949.1
gene_biotype: protein_coding
description:
  Among the AAA+ ATPases, the YifB protease family belongs to the Helix 2 insert clade; unknown function; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_12025
symbol: AKH20956.1
gene_biotype: protein_coding
description:
  Acriflavine resistance protein B; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_12070
symbol: djlA
gene_biotype: protein_coding
description:
  Molecular chaperone DnaJ; Regulatory DnaK co-chaperone. Direct interaction between DnaK and DjlA is needed for the induction of the wcaABCDE operon, involved in the synthesis of a colanic acid polysaccharide capsule, possibly through activation of the RcsB/RcsC phosphotransfer signaling pathway. The colanic acid capsule may help the bacterium survive conditions outside the host.


ensembl_gene_id: AAY24_12095
symbol: AKH20966.1
gene_biotype: protein_coding
description:
  Gamma-glutamyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_12100
symbol: AKH20967.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial histone-like protein family.


ensembl_gene_id: AAY24_12105
symbol: AKH20968.1
gene_biotype: protein_coding
description:
  Aspartyl protease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_12115
symbol: AKH20970.1
gene_biotype: protein_coding
description:
  Heterodisulfide reductase subunit A; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_12155
symbol: AKH20978.1
gene_biotype: protein_coding
description:
  Multidrug ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_12230
symbol: AKH20990.1
gene_biotype: protein_coding
description:
  Thiosulfate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_12255
symbol: AKH20994.1
gene_biotype: protein_coding
description:
  Adenylylsulfate reductase; Catalyzes the reduction of adenosine 5'-phosphosulfate to AMP and sulfite; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_12260
symbol: aprB
gene_biotype: protein_coding
description:
  Adenylylsulfate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_12280
symbol: AKH20998.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: AAY24_12290
symbol: glcF
gene_biotype: protein_coding
description:
  Glycolate oxidase iron-sulfur subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_12295
symbol: glcE
gene_biotype: protein_coding
description:
  Glycolate oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_12300
symbol: AKH21001.1
gene_biotype: protein_coding
description:
  Glycolate oxidase subunit GlcD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_12305
symbol: AKH21002.1
gene_biotype: protein_coding
description:
  Potassium transporter; Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA; Belongs to the TrkH potassium transport family.


ensembl_gene_id: AAY24_12310
symbol: trkA
gene_biotype: protein_coding
description:
  Involved in potassium uptake; found to be peripherally associated with the inner membrane in Escherichia coli; contains an NAD-binding domain; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_12315
symbol: AKH21004.1
gene_biotype: protein_coding
description:
  Nitrogen assimilation regulatory protein NtrX; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_12335
symbol: fmt
gene_biotype: protein_coding
description:
  methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.


ensembl_gene_id: AAY24_12355
symbol: smg
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Smg family.


ensembl_gene_id: AAY24_12360
symbol: topA
gene_biotype: protein_coding
description:
  DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]


ensembl_gene_id: AAY24_12400
symbol: AKH21020.1
gene_biotype: protein_coding
description:
  Molybdenum cofactor sulfurase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_12430
symbol: gloA
gene_biotype: protein_coding
description:
  Ni-dependent; catalyzes the formation of S-lactoylglutathione from methylglyoxal and glutathione; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_12475
symbol: AKH21032.1
gene_biotype: protein_coding
description:
  Peptidoglycan-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_12495
symbol: AKH21035.1
gene_biotype: protein_coding
description:
  Rod shape-determining protein RodA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_12535
symbol: purE
gene_biotype: protein_coding
description:
  Phosphoribosylaminoimidazole carboxylase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).


ensembl_gene_id: AAY24_12540
symbol: AKH21041.1
gene_biotype: protein_coding
description:
  tRNA threonylcarbamoyladenosine biosynthesis protein RimN; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_12555
symbol: hemB
gene_biotype: protein_coding
description:
  Delta-aminolevulinic acid dehydratase; Catalyzes the formation of porphobilinogen from 5-aminolevulinate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ALAD family.


ensembl_gene_id: AAY24_12560
symbol: aroE
gene_biotype: protein_coding
description:
  Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).


ensembl_gene_id: AAY24_12575
symbol: AKH21046.1
gene_biotype: protein_coding
description:
  LemA family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_12595
symbol: ubiD
gene_biotype: protein_coding
description:
  3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol, an intermediate step in ubiquinone biosynthesis.


ensembl_gene_id: AAY24_12610
symbol: AKH21053.1
gene_biotype: protein_coding
description:
  CDP-6-deoxy-delta-3,4-glucoseen reductase; Catalyzes the formation of 3,6-dideoxy-D-glycero-D-glycero-4-hexulose; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_12630
symbol: hemC
gene_biotype: protein_coding
description:
  Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.


ensembl_gene_id: AAY24_12650
symbol: argH
gene_biotype: protein_coding
description:
  Argininosuccinate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_12665
symbol: AKH21064.1
gene_biotype: protein_coding
description:
  Nucleotide pyrophosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_12685
symbol: dapF
gene_biotype: protein_coding
description:
  Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.


ensembl_gene_id: AAY24_12695
symbol: AKH21069.1
gene_biotype: protein_coding
description:
  Recombinase XerC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_12715
symbol: hslV
gene_biotype: protein_coding
description:
  ATP-dependent protease subunit HslV; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery.


ensembl_gene_id: AAY24_12720
symbol: hslU
gene_biotype: protein_coding
description:
  ATP-dependent protease ATP-binding subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis.


ensembl_gene_id: AAY24_12725
symbol: AKH21073.1
gene_biotype: protein_coding
description:
  1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_12730
symbol: ubiE
gene_biotype: protein_coding
description:
  Hypothetical protein; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2).


ensembl_gene_id: AAY24_12740
symbol: ubiB
gene_biotype: protein_coding
description:
  Ubiquinone biosynthesis protein UbiB; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis.


ensembl_gene_id: AAY24_12760
symbol: pfkA
gene_biotype: protein_coding
description:
  6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. Mixed-substrate PFK group III subfamily.


ensembl_gene_id: AAY24_12765
symbol: AKH21080.1
gene_biotype: protein_coding
description:
  4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_12800
symbol: secB
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecB; One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA.


ensembl_gene_id: AAY24_12805
symbol: gpsA
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: AAY24_12810
symbol: trmL
gene_biotype: protein_coding
description:
  rRNA methylase; Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S-adenosyl-L-methionine to the 2'-OH of the wobble nucleotide.


ensembl_gene_id: AAY24_12835
symbol: glnG
gene_biotype: protein_coding
description:
  Nitrogen regulation protein NR(I); Member of the two-component regulatory system NtrB/NtrC, which controls expression of the nitrogen-regulated (ntr) genes in response to nitrogen limitation. Phosphorylated NtrC binds directly to DNA and stimulates the formation of open promoter-sigma54-RNA polymerase complexes.


ensembl_gene_id: AAY24_12850
symbol: glnA
gene_biotype: protein_coding
description:
  Forms a homododecamer; forms glutamine from ammonia and glutamate with the conversion of ATP to ADP and phosphate; also functions in the assimilation of ammonia; highly regulated protein controlled by the addition/removal of adenylyl groups by adenylyltransferase from specific tyrosine residues; addition of adenylyl groups results in inactivation of the enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_12855
symbol: AKH21096.1
gene_biotype: protein_coding
description:
  Cation transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.


ensembl_gene_id: AAY24_12865
symbol: AKH21098.1
gene_biotype: protein_coding
description:
  tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_12875
symbol: glyQ
gene_biotype: protein_coding
description:
  glycyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_12880
symbol: glyS
gene_biotype: protein_coding
description:
  glycine--tRNA ligase beta chain; glyS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_12890
symbol: AKH21103.1
gene_biotype: protein_coding
description:
  Acyl-phosphate glycerol 3-phosphate acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_12895
symbol: gyrB
gene_biotype: protein_coding
description:
  DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: AAY24_12905
symbol: dnaN
gene_biotype: protein_coding
description:
  DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of  [...]


ensembl_gene_id: AAY24_12910
symbol: dnaA
gene_biotype: protein_coding
description:
  Chromosomal replication initiation protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.


ensembl_gene_id: AAY24_12920
symbol: yidC
gene_biotype: protein_coding
description:
  Membrane protein insertase; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins.


ensembl_gene_id: AAY24_12925
symbol: mnmE
gene_biotype: protein_coding
description:
  Hypothetical protein; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.


ensembl_gene_id: AAY24_12970
symbol: AKH21116.1
gene_biotype: protein_coding
description:
  Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_12975
symbol: AKH21117.1
gene_biotype: protein_coding
description:
  Metal ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_12980
symbol: AKH21118.1
gene_biotype: protein_coding
description:
  Bifunctional enoyl-CoA hydratase/phosphate acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_13000
symbol: mnmG
gene_biotype: protein_coding
description:
  Hypothetical protein; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.


ensembl_gene_id: AAY24_13010
symbol: AKH22263.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0178 family.


ensembl_gene_id: AAY24_13030
symbol: AKH22264.1
gene_biotype: protein_coding
description:
  Chromosome partitioning protein ParB; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ParB family.


ensembl_gene_id: AAY24_13040
symbol: atpB-2
gene_biotype: protein_coding
description:
  ATP synthase F0F1 subunit A; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.


ensembl_gene_id: AAY24_13045
symbol: atpE
gene_biotype: protein_coding
description:
  ATP F0F1 synthase subunit C; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: AAY24_13050
symbol: atpF
gene_biotype: protein_coding
description:
  ATP synthase subunit B; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.


ensembl_gene_id: AAY24_13055
symbol: atpH
gene_biotype: protein_coding
description:
  ATP synthase subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: AAY24_13060
symbol: atpA-2
gene_biotype: protein_coding
description:
  ATP F0F1 synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.


ensembl_gene_id: AAY24_13065
symbol: atpG
gene_biotype: protein_coding
description:
  ATP F0F1 synthase subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.


ensembl_gene_id: AAY24_13070
symbol: atpD-2
gene_biotype: protein_coding
description:
  ATP synthase F0F1 subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.


ensembl_gene_id: AAY24_13075
symbol: atpC
gene_biotype: protein_coding
description:
  ATP synthase F0F1 subunit epsilon; Produces ATP from ADP in the presence of a proton gradient across the membrane.


ensembl_gene_id: AAY24_13115
symbol: glmU
gene_biotype: protein_coding
description:
  Glucosamine-1-phosphate N-acetyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain.


ensembl_gene_id: AAY24_13120
symbol: glmS
gene_biotype: protein_coding
description:
  Glucosamine--fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.


ensembl_gene_id: AAY24_13190
symbol: AKH21154.1
gene_biotype: protein_coding
description:
  With AhpF catalyzes the conversion of alkyl hydroperoxides to their corresponding alcohols; AhpC reduced the hydroperoxide substrate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_13205
symbol: AKH21156.1
gene_biotype: protein_coding
description:
  Glyceraldehyde-3-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_13210
symbol: AKH21157.1
gene_biotype: protein_coding
description:
  MFS transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_13230
symbol: AKH21161.1
gene_biotype: protein_coding
description:
  Aldehyde reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_13245
symbol: AKH21163.1
gene_biotype: protein_coding
description:
  Periplasmic protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_13275
symbol: uvrD
gene_biotype: protein_coding
description:
  DNA-dependent helicase II; Unwinds DNA duplexes with 3' to 5' polarity with respect to the bound strand and initiates unwinding most effectively when a single-stranded region is present; involved in the post-incision events of nucleotide excision repair and methyl-directed mismatch repair; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_13285
symbol: AKH21169.1
gene_biotype: protein_coding
description:
  Pseudouridine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_13290
symbol: AKH21170.1
gene_biotype: protein_coding
description:
  alanyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_13305
symbol: AKH21173.1
gene_biotype: protein_coding
description:
  ABC transporter substrate-binding protein; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.


ensembl_gene_id: AAY24_13310
symbol: AKH21174.1
gene_biotype: protein_coding
description:
  Malic enzyme; NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_13320
symbol: AKH21176.1
gene_biotype: protein_coding
description:
  Aromatic amino acid aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_13340
symbol: gltA
gene_biotype: protein_coding
description:
  Type II enzyme; in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate; allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation; forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A; functions in TCA cycle, glyoxylate cycle and respiration; enzyme from Helicobacter pylori is not inhibited by NADH; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the citrate synthase family.


ensembl_gene_id: AAY24_13355
symbol: AKH21182.1
gene_biotype: protein_coding
description:
  Pilus assembly protein PilM; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_13360
symbol: AKH21183.1
gene_biotype: protein_coding
description:
  Pilus assembly protein PilN; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_13365
symbol: AKH21184.1
gene_biotype: protein_coding
description:
  Pilus assembly protein PilO; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_13375
symbol: AKH22271.1
gene_biotype: protein_coding
description:
  Pilus assembly protein PilQ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_13380
symbol: aroK
gene_biotype: protein_coding
description:
  Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.


ensembl_gene_id: AAY24_13385
symbol: aroB
gene_biotype: protein_coding
description:
  3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).


ensembl_gene_id: AAY24_13400
symbol: gltD
gene_biotype: protein_coding
description:
  Glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_13405
symbol: hemE
gene_biotype: protein_coding
description:
  Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.


ensembl_gene_id: AAY24_13460
symbol: metH
gene_biotype: protein_coding
description:
  Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.


ensembl_gene_id: AAY24_13470
symbol: AKH21202.1
gene_biotype: protein_coding
description:
  tRNA (guanine-N2)-dimethyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_13485
symbol: AKH21205.1
gene_biotype: protein_coding
description:
  Protein/domain typically associated with flavoprotein oxygenase, DIM6/NTAB family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_13515
symbol: AKH21211.1
gene_biotype: protein_coding
description:
  Chemotaxis protein MotA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_13525
symbol: prpE
gene_biotype: protein_coding
description:
  Catalyzes the formation of propionyl-CoA using propionate as a substrate; PrpE from Ralstonia solanacearum can produce acetyl-, propionyl-, butyryl- and acrylyl-coenzyme A, and Salmonella enterica produces propionyl- and butyryl-coenzyme A; not expressed in Escherichia coli when grown on propionate/minimal media; ATP-dependent; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_13530
symbol: scpA
gene_biotype: protein_coding
description:
  methylmalonyl-CoA mutase; MDM; functions in conversion of succinate to propionate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_13535
symbol: AKH21215.1
gene_biotype: protein_coding
description:
  methylmalonyl-CoA carboxyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_13540
symbol: AKH21216.1
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_13545
symbol: meaB
gene_biotype: protein_coding
description:
  Protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_13550
symbol: mce
gene_biotype: protein_coding
description:
  methylmalonyl-CoA epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_13555
symbol: AKH21219.1
gene_biotype: protein_coding
description:
  Carbonate dehydratase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.


ensembl_gene_id: AAY24_13570
symbol: AKH21221.1
gene_biotype: protein_coding
description:
  malyl-CoA thiolesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_13575
symbol: AKH21222.1
gene_biotype: protein_coding
description:
  Molecular chaperone DnaK; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_13590
symbol: AKH21225.1
gene_biotype: protein_coding
description:
  Methionine sulfoxide reductase A; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_13605
symbol: AKH21227.1
gene_biotype: protein_coding
description:
  Molecular chaperone Hsp33; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_13610
symbol: AKH21228.1
gene_biotype: protein_coding
description:
  GTP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_13620
symbol: trpC
gene_biotype: protein_coding
description:
  Indole-3-glycerol-phosphate synthase; Involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TrpC family.


ensembl_gene_id: AAY24_13625
symbol: greB
gene_biotype: protein_coding
description:
  Transcription elongation factor GreB; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length.


ensembl_gene_id: AAY24_13630
symbol: AKH21231.1
gene_biotype: protein_coding
description:
  Tautomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 4-oxalocrotonate tautomerase family.


ensembl_gene_id: AAY24_13665
symbol: trpD
gene_biotype: protein_coding
description:
  Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).


ensembl_gene_id: AAY24_13670
symbol: AKH22274.1
gene_biotype: protein_coding
description:
  Anthranilate synthase component II; TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_13675
symbol: trpE
gene_biotype: protein_coding
description:
  Anthranilate synthase component I; Part of a heterotetrameric complex that catalyzes the two- step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine-binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentr [...]


ensembl_gene_id: AAY24_13680
symbol: AKH21238.1
gene_biotype: protein_coding
description:
  Phosphoglycolate phosphatase; Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family.


ensembl_gene_id: AAY24_13685
symbol: AKH21239.1
gene_biotype: protein_coding
description:
  Ribulose-phosphate 3-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ribulose-phosphate 3-epimerase family.


ensembl_gene_id: AAY24_13695
symbol: AKH21241.1
gene_biotype: protein_coding
description:
  Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: AAY24_13715
symbol: AKH21245.1
gene_biotype: protein_coding
description:
  Cytochrome C biogenesis protein CcsA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_13730
symbol: priA
gene_biotype: protein_coding
description:
  Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.


ensembl_gene_id: AAY24_13735
symbol: argS
gene_biotype: protein_coding
description:
  arginine--tRNA ligase; Catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_13750
symbol: feoB
gene_biotype: protein_coding
description:
  Iron transporter FeoB; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.


ensembl_gene_id: AAY24_13765
symbol: AKH22277.1
gene_biotype: protein_coding
description:
  Chloride channel protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_13785
symbol: AKH21255.1
gene_biotype: protein_coding
description:
  Glycerate dehydrogenase; Catalyzes the reduction of hydroxypyruvate to form D-glycerate, using NADH as an electron donor; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: AAY24_13790
symbol: AKH21256.1
gene_biotype: protein_coding
description:
  FAD-linked oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_13815
symbol: AKH21260.1
gene_biotype: protein_coding
description:
  TraB family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_13820
symbol: AKH21261.1
gene_biotype: protein_coding
description:
  Multidrug transporter AcrB; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: AAY24_13855
symbol: nspC
gene_biotype: protein_coding
description:
  Carboxynorspermidine decarboxylase; Catalyzes the decarboxylation of carboxynorspermidine and carboxyspermidine; Belongs to the Orn/Lys/Arg decarboxylase class-II family. NspC subfamily.


ensembl_gene_id: AAY24_13870
symbol: rplM
gene_biotype: protein_coding
description:
  50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.


ensembl_gene_id: AAY24_13875
symbol: rpsI
gene_biotype: protein_coding
description:
  30S ribosomal protein S9; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS9 family.


ensembl_gene_id: AAY24_13895
symbol: rpiA
gene_biotype: protein_coding
description:
  Ribose 5-phosphate isomerase; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.


ensembl_gene_id: AAY24_13900
symbol: ilvA
gene_biotype: protein_coding
description:
  Threonine dehydratase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA.


ensembl_gene_id: AAY24_13925
symbol: AKH21278.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0149 family.


ensembl_gene_id: AAY24_13930
symbol: pepP
gene_biotype: protein_coding
description:
  Xaa-Pro aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_13940
symbol: AKH21281.1
gene_biotype: protein_coding
description:
  Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_13945
symbol: AKH21282.1
gene_biotype: protein_coding
description:
  Iron deficiency-induced protein A; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_13950
symbol: gcvT
gene_biotype: protein_coding
description:
  Glycine cleavage system protein T; The glycine cleavage system catalyzes the degradation of glycine.


ensembl_gene_id: AAY24_13955
symbol: gcvH
gene_biotype: protein_coding
description:
  Glycine cleavage system protein H; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.


ensembl_gene_id: AAY24_13960
symbol: gcvPA
gene_biotype: protein_coding
description:
  Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein.


ensembl_gene_id: AAY24_13965
symbol: gcvPB
gene_biotype: protein_coding
description:
  Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. C-terminal subunit subfamily.


ensembl_gene_id: AAY24_13970
symbol: AKH21287.1
gene_biotype: protein_coding
description:
  Diacylglycerol kinase; Recycling of diacylglycerol produced during the turnover of membrane phospholipid.


ensembl_gene_id: AAY24_13975
symbol: AKH21288.1
gene_biotype: protein_coding
description:
  Sugar kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_13980
symbol: moaB
gene_biotype: protein_coding
description:
  Molybdopterin biosynthesis protein B; May be involved in the biosynthesis of molybdopterin. Belongs to the MoaB/Mog family.


ensembl_gene_id: AAY24_13985
symbol: AKH21290.1
gene_biotype: protein_coding
description:
  Molybdenum cofactor biosynthesis protein MoaA; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.


ensembl_gene_id: AAY24_13995
symbol: moaE
gene_biotype: protein_coding
description:
  Molybdenum cofactor biosynthesis protein MoaE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_14040
symbol: AKH21299.1
gene_biotype: protein_coding
description:
  Homoserine O-succinyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_14070
symbol: AKH21304.1
gene_biotype: protein_coding
description:
  SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_14085
symbol: lgt
gene_biotype: protein_coding
description:
  Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.


ensembl_gene_id: AAY24_14090
symbol: thyA
gene_biotype: protein_coding
description:
  Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis.


ensembl_gene_id: AAY24_14105
symbol: apaH
gene_biotype: protein_coding
description:
  Diadenosine tetraphosphatase; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family.


ensembl_gene_id: AAY24_14115
symbol: apaG
gene_biotype: protein_coding
description:
  Magnesium transporter ApaG; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_14130
symbol: AKH21315.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DegT/DnrJ/EryC1 family.


ensembl_gene_id: AAY24_14140
symbol: cysB
gene_biotype: protein_coding
description:
  LysR-type transcriptional regulator; contains helix-turn-helix (HTH) motif; in Escherichia coli this protein regulates cysteine biosynthesis by controlling expression of the cys regulon; autoregulates expression; crystal structure of Klebsiella aerogenes showed tetramer formation; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_14150
symbol: pdxA
gene_biotype: protein_coding
description:
  4-hydroxythreonine-4-phosphate dehydrogenase; Catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate); Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_14155
symbol: surA
gene_biotype: protein_coding
description:
  Molecular chaperone SurA; Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation.


ensembl_gene_id: AAY24_14170
symbol: AKH22286.1
gene_biotype: protein_coding
description:
  Aminoglycoside phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_14175
symbol: purD
gene_biotype: protein_coding
description:
  Phosphoribosylamine--glycine ligase; Catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GARS family.


ensembl_gene_id: AAY24_14180
symbol: AKH21321.1
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_14185
symbol: purH
gene_biotype: protein_coding
description:
  Phosphoribosylaminoimidazolecarboxamide formyltransferase; Involved in de novo purine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_14190
symbol: fis
gene_biotype: protein_coding
description:
  Fis family transcriptional regulator; Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters; Belongs to the transcriptional regulatory Fis family.


ensembl_gene_id: AAY24_14195
symbol: dusB
gene_biotype: protein_coding
description:
  tRNA-dihydrouridine synthase B; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the Dus family. DusB subfamily.


ensembl_gene_id: AAY24_14205
symbol: prmA
gene_biotype: protein_coding
description:
  Ribosomal protein L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family.


ensembl_gene_id: AAY24_14210
symbol: accC
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: AAY24_14220
symbol: aroQ
gene_biotype: protein_coding
description:
  3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.


ensembl_gene_id: AAY24_14240
symbol: AKH21330.1
gene_biotype: protein_coding
description:
  Exlusion protein FxsA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_14255
symbol: lipA
gene_biotype: protein_coding
description:
  Lipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.


ensembl_gene_id: AAY24_14260
symbol: lipB
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate.


ensembl_gene_id: AAY24_14265
symbol: AKH21333.1
gene_biotype: protein_coding
description:
  Lipoate regulatory protein YbeD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_14270
symbol: AKH21334.1
gene_biotype: protein_coding
description:
  Cytochrome C550; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_14290
symbol: rodA
gene_biotype: protein_coding
description:
  Rod shape-determining protein RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.


ensembl_gene_id: AAY24_14295
symbol: mrdA
gene_biotype: protein_coding
description:
  Penicillin-binding protein; Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily.


ensembl_gene_id: AAY24_14300
symbol: mreD
gene_biotype: protein_coding
description:
  Rod shape-determining protein MreD; Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins. Belongs to the MreD family.


ensembl_gene_id: AAY24_14310
symbol: AKH21340.1
gene_biotype: protein_coding
description:
  Rod shape-determining protein MreB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_14315
symbol: gatC
gene_biotype: protein_coding
description:
  glutamyl-tRNA amidotransferase; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.


ensembl_gene_id: AAY24_14320
symbol: gatA
gene_biotype: protein_coding
description:
  glutamyl-tRNA amidotransferase; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).


ensembl_gene_id: AAY24_14325
symbol: gatB
gene_biotype: protein_coding
description:
  glutamyl-tRNA amidotransferase; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily.


ensembl_gene_id: AAY24_14340
symbol: AKH21346.1
gene_biotype: protein_coding
description:
  Molybdopterin-synthase adenylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_14355
symbol: prfA
gene_biotype: protein_coding
description:
  Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.


ensembl_gene_id: AAY24_14360
symbol: hemA
gene_biotype: protein_coding
description:
  glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).


ensembl_gene_id: AAY24_14375
symbol: prs
gene_biotype: protein_coding
description:
  Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.


ensembl_gene_id: AAY24_14380
symbol: AKH22291.1
gene_biotype: protein_coding
description:
  50S ribosomal protein L25; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_14385
symbol: pth
gene_biotype: protein_coding
description:
  peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.


ensembl_gene_id: AAY24_14410
symbol: tuf
gene_biotype: protein_coding
description:
  Elongation factor Tu; EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_14420
symbol: AKH21355.1
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_14425
symbol: nusG
gene_biotype: protein_coding
description:
  Antitermination protein NusG; Participates in transcription elongation, termination and antitermination.


ensembl_gene_id: AAY24_14430
symbol: rplK
gene_biotype: protein_coding
description:
  50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.


ensembl_gene_id: AAY24_14435
symbol: rplA
gene_biotype: protein_coding
description:
  50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.


ensembl_gene_id: AAY24_14440
symbol: rplJ
gene_biotype: protein_coding
description:
  50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.


ensembl_gene_id: AAY24_14445
symbol: rplL
gene_biotype: protein_coding
description:
  50S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.


ensembl_gene_id: AAY24_14450
symbol: rpoB
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: AAY24_14460
symbol: rpsL
gene_biotype: protein_coding
description:
  30S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.


ensembl_gene_id: AAY24_14465
symbol: rpsG
gene_biotype: protein_coding
description:
  30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.


ensembl_gene_id: AAY24_14470
symbol: fusA
gene_biotype: protein_coding
description:
  Elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.


ensembl_gene_id: AAY24_14480
symbol: rpsJ
gene_biotype: protein_coding
description:
  30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.


ensembl_gene_id: AAY24_14485
symbol: rplC
gene_biotype: protein_coding
description:
  50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.


ensembl_gene_id: AAY24_14495
symbol: rplW
gene_biotype: protein_coding
description:
  50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.


ensembl_gene_id: AAY24_14500
symbol: rplB
gene_biotype: protein_coding
description:
  50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.


ensembl_gene_id: AAY24_14505
symbol: rpsS
gene_biotype: protein_coding
description:
  30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.


ensembl_gene_id: AAY24_14510
symbol: rplV
gene_biotype: protein_coding
description:
  50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.


ensembl_gene_id: AAY24_14515
symbol: rpsC
gene_biotype: protein_coding
description:
  30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.


ensembl_gene_id: AAY24_14520
symbol: rplP
gene_biotype: protein_coding
description:
  50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.


ensembl_gene_id: AAY24_14525
symbol: rpmC
gene_biotype: protein_coding
description:
  50S ribosomal protein L29; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uL29 family.


ensembl_gene_id: AAY24_14530
symbol: rpsQ
gene_biotype: protein_coding
description:
  30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.


ensembl_gene_id: AAY24_14535
symbol: rplN
gene_biotype: protein_coding
description:
  50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.


ensembl_gene_id: AAY24_14540
symbol: rplX
gene_biotype: protein_coding
description:
  50S ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.


ensembl_gene_id: AAY24_14545
symbol: rplE
gene_biotype: protein_coding
description:
  50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.


ensembl_gene_id: AAY24_14550
symbol: rpsN
gene_biotype: protein_coding
description:
  30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.


ensembl_gene_id: AAY24_14555
symbol: rpsH
gene_biotype: protein_coding
description:
  30S ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.


ensembl_gene_id: AAY24_14560
symbol: rplF
gene_biotype: protein_coding
description:
  50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.


ensembl_gene_id: AAY24_14565
symbol: rplR
gene_biotype: protein_coding
description:
  50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.


ensembl_gene_id: AAY24_14570
symbol: rpsE
gene_biotype: protein_coding
description:
  30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.


ensembl_gene_id: AAY24_14575
symbol: rpmD
gene_biotype: protein_coding
description:
  50S ribosomal protein L30; L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_14580
symbol: rplO
gene_biotype: protein_coding
description:
  50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.


ensembl_gene_id: AAY24_14585
symbol: secY
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.


ensembl_gene_id: AAY24_14590
symbol: rpsM
gene_biotype: protein_coding
description:
  30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.


ensembl_gene_id: AAY24_14595
symbol: rpsK
gene_biotype: protein_coding
description:
  30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.


ensembl_gene_id: AAY24_14600
symbol: rpsD
gene_biotype: protein_coding
description:
  30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.


ensembl_gene_id: AAY24_14605
symbol: rpoA
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: AAY24_14610
symbol: rplQ
gene_biotype: protein_coding
description:
  50S ribosomal protein L17; Is a component of the macrolide binding site in the peptidyl transferase center; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_14620
symbol: uvrA
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.


ensembl_gene_id: AAY24_14630
symbol: ssb
gene_biotype: protein_coding
description:
  Single-stranded DNA-binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.


ensembl_gene_id: AAY24_14640
symbol: AKH21396.1
gene_biotype: protein_coding
description:
  anhydro-N-acetylmuramic acid kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_14650
symbol: tyrS
gene_biotype: protein_coding
description:
  tyrosine--tRNA ligase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 2 subfamily.


ensembl_gene_id: AAY24_14710
symbol: AKH21398.1
gene_biotype: protein_coding
description:
  Peptidase M61; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_14755
symbol: ychF
gene_biotype: protein_coding
description:
  GTP-binding protein; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.


ensembl_gene_id: AAY24_14770
symbol: AKH21407.1
gene_biotype: protein_coding
description:
  Ammonia channel protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_14805
symbol: ispB
gene_biotype: protein_coding
description:
  Octaprenyl diphosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FPP/GGPP synthase family.


ensembl_gene_id: AAY24_14810
symbol: rplU
gene_biotype: protein_coding
description:
  50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.


ensembl_gene_id: AAY24_14815
symbol: rpmA
gene_biotype: protein_coding
description:
  50S ribosomal protein L27; Involved in the peptidyltransferase reaction during translation; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL27 family.


ensembl_gene_id: AAY24_14820
symbol: obgE
gene_biotype: protein_coding
description:
  GTPase CgtA; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.


ensembl_gene_id: AAY24_14825
symbol: proB
gene_biotype: protein_coding
description:
  Gamma-glutamyl kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.


ensembl_gene_id: AAY24_14840
symbol: murJ
gene_biotype: protein_coding
description:
  Membrane protein; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.


ensembl_gene_id: AAY24_14845
symbol: ribF
gene_biotype: protein_coding
description:
  FMN adenylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ribF family.


ensembl_gene_id: AAY24_14850
symbol: ileS
gene_biotype: protein_coding
description:
  isoleucine--tRNA ligase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily.


ensembl_gene_id: AAY24_14855
symbol: lspA
gene_biotype: protein_coding
description:
  Peptidase A8; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.


ensembl_gene_id: AAY24_14860
symbol: AKH21421.1
gene_biotype: protein_coding
description:
  N-acetyl-anhydromuranmyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_14870
symbol: AKH21422.1
gene_biotype: protein_coding
description:
  Nitrogen regulatory protein P-II; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_14895
symbol: AKH21424.1
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide pyrophosphorylase; Catalyzes the formation of pyridine-2,3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NadC/ModD family.


ensembl_gene_id: AAY24_14935
symbol: AKH21430.1
gene_biotype: protein_coding
description:
  acetyl-CoA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_14940
symbol: AKH21431.1
gene_biotype: protein_coding
description:
  Deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_14975
symbol: AKH21436.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the BolA/IbaG family.


ensembl_gene_id: AAY24_15000
symbol: hisI
gene_biotype: protein_coding
description:
  phosphoribosyl-AMP cyclohydrolase; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP.


ensembl_gene_id: AAY24_15005
symbol: gloB
gene_biotype: protein_coding
description:
  Hydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid.


ensembl_gene_id: AAY24_15075
symbol: ispH
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.


ensembl_gene_id: AAY24_15085
symbol: AKH21454.1
gene_biotype: protein_coding
description:
  ATP--cobalamin adenosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Cob(I)alamin adenosyltransferase family.


ensembl_gene_id: AAY24_15100
symbol: rimO
gene_biotype: protein_coding
description:
  Ribosomal protein S12 methylthiotransferase; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.


ensembl_gene_id: AAY24_15120
symbol: dusA
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs; Belongs to the Dus family. DusA subfamily.


ensembl_gene_id: AAY24_15135
symbol: AKH21463.1
gene_biotype: protein_coding
description:
  BatB protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_15165
symbol: AKH21468.1
gene_biotype: protein_coding
description:
  Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_15200
symbol: AKH21475.1
gene_biotype: protein_coding
description:
  Carboxylate--amine ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_15235
symbol: argA
gene_biotype: protein_coding
description:
  N-acetylglutamate synthase; Catalyzes the formation of N-acetyl-L-glutamate from L-glutamate and acetyl-CoA in arginine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the acetyltransferase family. ArgA subfamily.


ensembl_gene_id: AAY24_15255
symbol: argE
gene_biotype: protein_coding
description:
  Acetylornithine deacetylase; Catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine in arginine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_15265
symbol: AKH21487.1
gene_biotype: protein_coding
description:
  Sorbosone dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_15270
symbol: ilvD
gene_biotype: protein_coding
description:
  Dihydroxy-acid dehydratase; Catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the IlvD/Edd family.


ensembl_gene_id: AAY24_15280
symbol: typA
gene_biotype: protein_coding
description:
  GTP-binding protein TypA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_15285
symbol: dtd
gene_biotype: protein_coding
description:
  D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family.


ensembl_gene_id: AAY24_15290
symbol: hisB
gene_biotype: protein_coding
description:
  Imidazoleglycerol-phosphate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_15295
symbol: hisH
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.


ensembl_gene_id: AAY24_15300
symbol: hisA
gene_biotype: protein_coding
description:
  Catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_15305
symbol: hisF
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.


ensembl_gene_id: AAY24_15310
symbol: hisE
gene_biotype: protein_coding
description:
  phosphoribosyl-ATP pyrophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_15315
symbol: tatA
gene_biotype: protein_coding
description:
  Preprotein translocase subunit TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.


ensembl_gene_id: AAY24_15320
symbol: AKH21498.1
gene_biotype: protein_coding
description:
  Preprotein translocase subunit TatA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_15325
symbol: tatC
gene_biotype: protein_coding
description:
  Preprotein translocase subunit TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides.


ensembl_gene_id: AAY24_15330
symbol: AKH21500.1
gene_biotype: protein_coding
description:
  Pentapeptide repeat-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_15350
symbol: nifJ
gene_biotype: protein_coding
description:
  Pyruvate-flavodoxin oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_15405
symbol: rpoD
gene_biotype: protein_coding
description:
  RNA polymerase subunit sigma-70; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.


ensembl_gene_id: AAY24_15410
symbol: dnaG
gene_biotype: protein_coding
description:
  DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.


ensembl_gene_id: AAY24_15420
symbol: rpsU
gene_biotype: protein_coding
description:
  30S ribosomal protein S21; A small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bS21 family.


ensembl_gene_id: AAY24_15425
symbol: tsaD
gene_biotype: protein_coding
description:
  UGMP family protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.


ensembl_gene_id: AAY24_15430
symbol: plsY
gene_biotype: protein_coding
description:
  Acyl-phosphate glycerol 3-phosphate acyltransferase; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.


ensembl_gene_id: AAY24_15435
symbol: folB
gene_biotype: protein_coding
description:
  Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.


ensembl_gene_id: AAY24_15445
symbol: AKH21517.1
gene_biotype: protein_coding
description:
  Involved in pteridine salvage and antifolate resistance; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_15470
symbol: AKH21522.1
gene_biotype: protein_coding
description:
  CRISPR-associated protein Cas2; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_15500
symbol: AKH22312.1
gene_biotype: protein_coding
description:
  RNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DEAD box helicase family.


ensembl_gene_id: AAY24_15515
symbol: cca
gene_biotype: protein_coding
description:
  2', 3'-cyclic nucleotide 2'-phosphodiesterase; Catalyzes the addition and repair of the essential 3'-terminal CCA sequence in tRNAs without using a nucleic acid template; phosphohydrolase activities include hydrolysis of pyrophosphate, 5'-nucleoside tri- and diphosphates, NADP, and 2'-AMP with the production of Pi, metal-dependent phosphodiesterase activity for 2',3'-cAMP, 2',3'-cGMP, and 2',3'-cCMP, and hydrolysis 2',3'-cyclic substrates with the formation of 2'-nucleotides and 3'-nucleotides; these phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA ter [...]


ensembl_gene_id: AAY24_15520
symbol: AKH21529.1
gene_biotype: protein_coding
description:
  Aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_15530
symbol: AKH21531.1
gene_biotype: protein_coding
description:
  Stationary phase, binds sigma 70 RNA polymerase subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Rsd/AlgQ family.


ensembl_gene_id: AAY24_15550
symbol: AKH21533.1
gene_biotype: protein_coding
description:
  Sel1 domain protein repeat-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_15560
symbol: AKH21535.1
gene_biotype: protein_coding
description:
  Glutathione S-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_15570
symbol: AKH21537.1
gene_biotype: protein_coding
description:
  Methylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_15595
symbol: AKH21541.1
gene_biotype: protein_coding
description:
  Response regulator GlrR; With GlrK is part of a two-component signal transduction system regulating glmY; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_15615
symbol: AKH21545.1
gene_biotype: protein_coding
description:
  Aspartate racemase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_15640
symbol: hisC-2
gene_biotype: protein_coding
description:
  Histidinol-phosphate aminotransferase; Catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.


ensembl_gene_id: AAY24_15645
symbol: AKH21550.1
gene_biotype: protein_coding
description:
  Catalyzes the carboxylation of D-ribulose 1,5-bisphosphate in carbon dioxide fixation; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the RuBisCO large chain family.


ensembl_gene_id: AAY24_15650
symbol: AKH21551.1
gene_biotype: protein_coding
description:
  Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: AAY24_15655
symbol: dxs
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.


ensembl_gene_id: AAY24_15680
symbol: AKH21557.1
gene_biotype: protein_coding
description:
  Hydrogenase 4 subunit F; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_15685
symbol: AKH21558.1
gene_biotype: protein_coding
description:
  Formate hydrogenlyase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_15695
symbol: AKH21560.1
gene_biotype: protein_coding
description:
  Hydantoin racemase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_15710
symbol: AKH22316.1
gene_biotype: protein_coding
description:
  Sodium:proton antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_15725
symbol: AKH22318.1
gene_biotype: protein_coding
description:
  Dimethylmenaquinone methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_15735
symbol: gmhA
gene_biotype: protein_coding
description:
  DnaA initiator-associating protein DiaA; Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate.


ensembl_gene_id: AAY24_15755
symbol: AKH21568.1
gene_biotype: protein_coding
description:
  Heat-shock protein Hsp20; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the small heat shock protein (HSP20) family.


ensembl_gene_id: AAY24_15760
symbol: AKH21569.1
gene_biotype: protein_coding
description:
  Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.


ensembl_gene_id: AAY24_15775
symbol: grxD
gene_biotype: protein_coding
description:
  Glutaredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutaredoxin family. Monothiol subfamily.


ensembl_gene_id: AAY24_15785
symbol: rnt
gene_biotype: protein_coding
description:
  Ribonuclease T; Trims short 3' overhangs of a variety of RNA species, leaving a one or two nucleotide 3' overhang. Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A). Also appears to be involved in tRNA biosynthesis.


ensembl_gene_id: AAY24_15810
symbol: aceE-2
gene_biotype: protein_coding
description:
  E1 component; part of pyruvate dehydrogenase; forms a complex with DlaT and LpdC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_15835
symbol: argG
gene_biotype: protein_coding
description:
  Argininosuccinate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the argininosuccinate synthase family. Type 1 subfamily.


ensembl_gene_id: AAY24_15845
symbol: ispG
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family.


ensembl_gene_id: AAY24_15865
symbol: trpB-2
gene_biotype: protein_coding
description:
  Tryptophan synthase subunit beta; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.


ensembl_gene_id: AAY24_15870
symbol: AKH21590.1
gene_biotype: protein_coding
description:
  ABC transporter ATPase; Uup; in Escherichia coli this cytoplasmic protein was shown to contain ATPase activity; mutations in this gene affect RecA-independent excision of transposons and affects Mu bacteriophage growth; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_15875
symbol: dbpA
gene_biotype: protein_coding
description:
  DEAD/DEAH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DEAD box helicase family.


ensembl_gene_id: AAY24_15940
symbol: AKH21602.1
gene_biotype: protein_coding
description:
  DMSO reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_15970
symbol: AKH21607.1
gene_biotype: protein_coding
description:
  Cytochrome d terminal oxidase subunit 1; Part of the aerobic respiratory chain; catalyzes the ubiquinol to ubiquinone; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_15975
symbol: AKH21608.1
gene_biotype: protein_coding
description:
  Cytochrome d ubiquinol oxidase subunit 2; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_15980
symbol: AKH21609.1
gene_biotype: protein_coding
description:
  Cysteine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_16005
symbol: AKH21614.1
gene_biotype: protein_coding
description:
  Endonuclease VIII; 5-formyluracil/5-hydroxymethyluracil DNA glycosylase; involved in base excision repair of DNA damaged by oxidation or by mutagenic agents; acts as DNA glycosylase that recognizes and removes damaged bases with a preference for oxidized pyrimidines; has apurinic/apyrimidinic lyase activity; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_16010
symbol: AKH21615.1
gene_biotype: protein_coding
description:
  Diaminobutyrate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_16035
symbol: AKH22322.1
gene_biotype: protein_coding
description:
  Methionine sulfoxide reductase B; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_16050
symbol: AKH21622.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0260 family.


ensembl_gene_id: AAY24_16075
symbol: AKH22324.1
gene_biotype: protein_coding
description:
  Heavy metal transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_16110
symbol: aspS
gene_biotype: protein_coding
description:
  aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.


ensembl_gene_id: AAY24_16120
symbol: AKH22326.1
gene_biotype: protein_coding
description:
  Phosphate starvation protein PhoH; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_16125
symbol: AKH21633.1
gene_biotype: protein_coding
description:
  Glycine cleavage system protein R; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_16130
symbol: dapA
gene_biotype: protein_coding
description:
  Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).


ensembl_gene_id: AAY24_16150
symbol: purL
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate.


ensembl_gene_id: AAY24_16155
symbol: AKH21639.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_16185
symbol: soxA
gene_biotype: protein_coding
description:
  Sulfur oxidation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_16210
symbol: soxB
gene_biotype: protein_coding
description:
  5'-nucleotidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 5'-nucleotidase family.


ensembl_gene_id: AAY24_16220
symbol: folD
gene_biotype: protein_coding
description:
  Methenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.


ensembl_gene_id: AAY24_16250
symbol: AKH22332.1
gene_biotype: protein_coding
description:
  Sulfonate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_16265
symbol: AKH21649.1
gene_biotype: protein_coding
description:
  GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_16290
symbol: AKH21654.1
gene_biotype: protein_coding
description:
  Electron transporter RsxA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_16295
symbol: AKH21655.1
gene_biotype: protein_coding
description:
  Electron transporter RnfB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_16305
symbol: AKH22335.1
gene_biotype: protein_coding
description:
  Electron transporter RnfD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_16310
symbol: AKH22336.1
gene_biotype: protein_coding
description:
  Electron transporter RnfG; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_16315
symbol: AKH21657.1
gene_biotype: protein_coding
description:
  Electron transport complex RsxE subunit; In Excherichia coli RsxABCDEG reduces SoxR which turns off induction of SoxS transcription factor in the absence of oxidizing agents; similar to the rnfABCDGE operon in Rhodobacter capsulatus involved in transferring electrons to nitrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_16325
symbol: AKH21658.1
gene_biotype: protein_coding
description:
  Monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_16370
symbol: AKH21664.1
gene_biotype: protein_coding
description:
  Antibiotic ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_16395
symbol: AKH21667.1
gene_biotype: protein_coding
description:
  Diadenosine tetraphosphatase-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_16400
symbol: AKH21668.1
gene_biotype: protein_coding
description:
  Sodium:proline symporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_16415
symbol: AKH22343.1
gene_biotype: protein_coding
description:
  Gamma-glutamyltranspeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_16425
symbol: AKH22345.1
gene_biotype: protein_coding
description:
  CBS domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_16460
symbol: AKH21673.1
gene_biotype: protein_coding
description:
  Hemolysin secretion protein D; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_16480
symbol: AKH21676.1
gene_biotype: protein_coding
description:
  Molybdenum ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_16485
symbol: AKH21677.1
gene_biotype: protein_coding
description:
  Molybdenum ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_16490
symbol: AKH21678.1
gene_biotype: protein_coding
description:
  Protein RnfH; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_16510
symbol: AKH21682.1
gene_biotype: protein_coding
description:
  Electron transporter RnfC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_16520
symbol: AKH21684.1
gene_biotype: protein_coding
description:
  Electron transporter RnfA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_16550
symbol: AKH21690.1
gene_biotype: protein_coding
description:
  Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_16570
symbol: AKH21693.1
gene_biotype: protein_coding
description:
  Nitrogen fixation protein NifB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_16595
symbol: AKH21697.1
gene_biotype: protein_coding
description:
  ADP-ribosyl-(dinitrogen reductase) hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_16610
symbol: AKH21699.1
gene_biotype: protein_coding
description:
  NAD(+)--dinitrogen-reductase ADP-D-ribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_16615
symbol: nifH
gene_biotype: protein_coding
description:
  Nitrogenase iron protein; nitrogenase component 2; with component 1, an molybdenum-iron protein, catalyzes the fixation of nitrogen to ammonia; nitrogen reductase provides electrons to the nitrogenase complex; in R. etli there are three essentially identical copies of nifH which are actively expressed during symbiosis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_16620
symbol: AKH21701.1
gene_biotype: protein_coding
description:
  Nitrogenase molybdenum-iron protein subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_16625
symbol: AKH21702.1
gene_biotype: protein_coding
description:
  Nitrogenase molybdenum-iron protein subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_16630
symbol: AKH21703.1
gene_biotype: protein_coding
description:
  Protein NifT; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_16640
symbol: AKH21705.1
gene_biotype: protein_coding
description:
  Dinitrogenase iron-molybdenum cofactor biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_16650
symbol: AKH22349.1
gene_biotype: protein_coding
description:
  (Fe-S) protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_16665
symbol: AKH21708.1
gene_biotype: protein_coding
description:
  Nitrogenase iron-molybdenum cofactor biosynthesis protein NifE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_16670
symbol: AKH21709.1
gene_biotype: protein_coding
description:
  Nitrogenase iron-molybdenum cofactor biosynthesis protein NifN; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_16675
symbol: AKH21710.1
gene_biotype: protein_coding
description:
  Nitrogen fixation protein NifX; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_16715
symbol: AKH21716.1
gene_biotype: protein_coding
description:
  Nitrogen fixation protein NifU; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_16725
symbol: AKH21718.1
gene_biotype: protein_coding
description:
  Homocitrate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_16740
symbol: AKH21720.1
gene_biotype: protein_coding
description:
  Nitrogen fixation protein NifW; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_16745
symbol: AKH21721.1
gene_biotype: protein_coding
description:
  Protein NifZ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_16755
symbol: AKH22353.1
gene_biotype: protein_coding
description:
  Clp protease ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_16795
symbol: cobO
gene_biotype: protein_coding
description:
  cob(I)yrinic acid a c-diamide adenosyltransferase; Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids.


ensembl_gene_id: AAY24_16825
symbol: AKH22357.1
gene_biotype: protein_coding
description:
  Twin-arginine translocation pathway signal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_16850
symbol: AKH21733.1
gene_biotype: protein_coding
description:
  Carboxymuconolactone decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_16870
symbol: glyA
gene_biotype: protein_coding
description:
  Serine hydroxymethyltransferase; Catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_16875
symbol: nrdR
gene_biotype: protein_coding
description:
  NrdR family transcriptional regulator; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family.


ensembl_gene_id: AAY24_16880
symbol: AKH21739.1
gene_biotype: protein_coding
description:
  Riboflavin biosynthesis protein RibD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_16890
symbol: ribB-2
gene_biotype: protein_coding
description:
  3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.


ensembl_gene_id: AAY24_16895
symbol: ribH
gene_biotype: protein_coding
description:
  6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin; Belongs to the DMRL synthase family.


ensembl_gene_id: AAY24_16900
symbol: nusB
gene_biotype: protein_coding
description:
  N utilization substance protein B; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.


ensembl_gene_id: AAY24_16905
symbol: AKH21744.1
gene_biotype: protein_coding
description:
  Thiamine-monophosphate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_16910
symbol: AKH22360.1
gene_biotype: protein_coding
description:
  Phosphatidylglycerophosphatase; Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG).


ensembl_gene_id: AAY24_16950
symbol: AKH21750.1
gene_biotype: protein_coding
description:
  Uptake hydrogenase small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_16960
symbol: cybH
gene_biotype: protein_coding
description:
  Ni/Fe hydrogenase 1 b-type cytochrome subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_16975
symbol: AKH21755.1
gene_biotype: protein_coding
description:
  Hydrogenase expression protein HupH; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_16980
symbol: AKH21756.1
gene_biotype: protein_coding
description:
  Rubredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the rubredoxin family.


ensembl_gene_id: AAY24_16990
symbol: ispA
gene_biotype: protein_coding
description:
  Geranyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FPP/GGPP synthase family.


ensembl_gene_id: AAY24_16995
symbol: xseB
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.


ensembl_gene_id: AAY24_17000
symbol: parE
gene_biotype: protein_coding
description:
  DNA topoisomerase IV subunit B; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 1 subfamily.


ensembl_gene_id: AAY24_17030
symbol: AKH22364.1
gene_biotype: protein_coding
description:
  Metal-dependent hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_17045
symbol: AKH21763.1
gene_biotype: protein_coding
description:
  Hemolysin III; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: AAY24_17050
symbol: parC
gene_biotype: protein_coding
description:
  DNA topoisomerase IV subunit A; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase GyrA/ParC subunit family. ParC type 1 subfamily.


