# geneInfo

ensembl_gene_id: LIP_0001
symbol: dnaA
gene_biotype: protein_coding
description:
  Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.


ensembl_gene_id: LIP_0002
symbol: LIP_0002
gene_biotype: protein_coding
description:
  Hypothetical protein; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of replication [...]


ensembl_gene_id: LIP_0004
symbol: recF
gene_biotype: protein_coding
description:
  DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family.


ensembl_gene_id: LIP_0006
symbol: gyrB
gene_biotype: protein_coding
description:
  DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: LIP_0007
symbol: gyrA
gene_biotype: protein_coding
description:
  DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: LIP_0012
symbol: trpB
gene_biotype: protein_coding
description:
  Tryptophan synthase subunit beta; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.


ensembl_gene_id: LIP_0013
symbol: leuC
gene_biotype: protein_coding
description:
  Isopropylmalate isomerase; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.


ensembl_gene_id: LIP_0014
symbol: leuD
gene_biotype: protein_coding
description:
  Isopropylmalate isomerase; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily.


ensembl_gene_id: LIP_0015
symbol: glyA
gene_biotype: protein_coding
description:
  Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.


ensembl_gene_id: LIP_0020
symbol: serS
gene_biotype: protein_coding
description:
  seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).


ensembl_gene_id: LIP_0076
symbol: LIP_0076
gene_biotype: protein_coding
description:
  Carboxypeptidase; Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues.


ensembl_gene_id: LIP_0085
symbol: cheD
gene_biotype: protein_coding
description:
  Chemotaxis protein CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.


ensembl_gene_id: LIP_0087
symbol: mprF
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms.


ensembl_gene_id: LIP_0092
symbol: groS
gene_biotype: protein_coding
description:
  Molecular chaperone GroES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.


ensembl_gene_id: LIP_0106
symbol: LIP_0106
gene_biotype: protein_coding
description:
  Cytochrome C oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).


ensembl_gene_id: LIP_0109
symbol: ctaB
gene_biotype: protein_coding
description:
  Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group; Belongs to the UbiA prenyltransferase family. Protoheme IX farnesyltransferase subfamily.


ensembl_gene_id: LIP_0113
symbol: pyrB
gene_biotype: protein_coding
description:
  Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.


ensembl_gene_id: LIP_0114
symbol: pyrC
gene_biotype: protein_coding
description:
  Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.


ensembl_gene_id: LIP_0117
symbol: pyrE
gene_biotype: protein_coding
description:
  Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).


ensembl_gene_id: LIP_0118
symbol: LIP_0118
gene_biotype: protein_coding
description:
  Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.


ensembl_gene_id: LIP_0120
symbol: ispH
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.


ensembl_gene_id: LIP_0138
symbol: adk
gene_biotype: protein_coding
description:
  Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.


ensembl_gene_id: LIP_0149
symbol: fumC
gene_biotype: protein_coding
description:
  Aspartate ammonia-lyase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.


ensembl_gene_id: LIP_0156
symbol: ldh
gene_biotype: protein_coding
description:
  Lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family.


ensembl_gene_id: LIP_0170
symbol: LIP_0170
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.


ensembl_gene_id: LIP_0182
symbol: thyX
gene_biotype: protein_coding
description:
  FAD-dependent thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant.


ensembl_gene_id: LIP_0186
symbol: LIP_0186
gene_biotype: protein_coding
description:
  2-amino-3-ketobutyrate CoA ligase; Catalyzes the decarboxylative condensation of pimeloyl-[acyl- carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide.


ensembl_gene_id: LIP_0201
symbol: LIP_0201
gene_biotype: protein_coding
description:
  Pyruvate dehydrogenase; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.


ensembl_gene_id: LIP_0202
symbol: pdhA
gene_biotype: protein_coding
description:
  Pyruvate dehydrogenase E1 subunit alpha; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).


ensembl_gene_id: LIP_0203
symbol: LIP_0203
gene_biotype: protein_coding
description:
  Branched-chain amino acid transport system permease protein LivM; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: LIP_0204
symbol: LIP_0204
gene_biotype: protein_coding
description:
  Amino acid ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: LIP_0209
symbol: trpS
gene_biotype: protein_coding
description:
  tryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: LIP_0214
symbol: LIP_0214
gene_biotype: protein_coding
description:
  CcmE/CycJ protein; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH.


ensembl_gene_id: LIP_0270
symbol: ddl
gene_biotype: protein_coding
description:
  D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.


ensembl_gene_id: LIP_0283
symbol: thiG
gene_biotype: protein_coding
description:
  Bifunctional sulfur carrier protein/thiazole synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.


ensembl_gene_id: LIP_0296
symbol: LIP_0296
gene_biotype: protein_coding
description:
  DMSO reductase subunit A; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: LIP_0322
symbol: LIP_0322
gene_biotype: protein_coding
description:
  ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: LIP_0337
symbol: aroA
gene_biotype: protein_coding
description:
  3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.


ensembl_gene_id: LIP_0382
symbol: tatA
gene_biotype: protein_coding
description:
  Twin-arginine translocation protein TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.


ensembl_gene_id: LIP_0393
symbol: LIP_0393
gene_biotype: protein_coding
description:
  Cysteine methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated.


ensembl_gene_id: LIP_0427
symbol: tal
gene_biotype: protein_coding
description:
  Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.


ensembl_gene_id: LIP_0489
symbol: LIP_0489
gene_biotype: protein_coding
description:
  6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family.


ensembl_gene_id: LIP_0517
symbol: anmK
gene_biotype: protein_coding
description:
  anhydro-N-acetylmuramic acid kinase; Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the anhydro-N-acetylmuramic acid kinase family.


ensembl_gene_id: LIP_0520
symbol: LIP_0520
gene_biotype: protein_coding
description:
  Amino acid ABC transporter substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: LIP_0555
symbol: rbsA
gene_biotype: protein_coding
description:
  D-ribose transporter ATP-binding protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.


ensembl_gene_id: LIP_0556
symbol: LIP_0556
gene_biotype: protein_coding
description:
  Ribose ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: LIP_0557
symbol: LIP_0557
gene_biotype: protein_coding
description:
  Branched-chain amino acid ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: LIP_0581
symbol: hypA
gene_biotype: protein_coding
description:
  Hydrogenase nickel incorporation protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.


ensembl_gene_id: LIP_0598
symbol: LIP_0598
gene_biotype: protein_coding
description:
  Formate dehydrogenase subunit alpha; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: LIP_0601
symbol: msrA
gene_biotype: protein_coding
description:
  Methionine sulfoxide reductase A; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.


ensembl_gene_id: LIP_0639
symbol: LIP_0639
gene_biotype: protein_coding
description:
  Cobalt ABC transporter ATP-binding protein; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.


ensembl_gene_id: LIP_0654
symbol: LIP_0654
gene_biotype: protein_coding
description:
  Aminotransferase class III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: LIP_0673
symbol: fdhD
gene_biotype: protein_coding
description:
  Formate dehydrogenase; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.


ensembl_gene_id: LIP_0679
symbol: nth
gene_biotype: protein_coding
description:
  Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.


ensembl_gene_id: LIP_0707
symbol: hemE
gene_biotype: protein_coding
description:
  Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.


ensembl_gene_id: LIP_0708
symbol: hemH
gene_biotype: protein_coding
description:
  Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.


ensembl_gene_id: LIP_0709
symbol: LIP_0709
gene_biotype: protein_coding
description:
  Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.


ensembl_gene_id: LIP_0725
symbol: LIP_0725
gene_biotype: protein_coding
description:
  Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.


ensembl_gene_id: LIP_0734
symbol: ppa
gene_biotype: protein_coding
description:
  Inorganic pyrophosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.


ensembl_gene_id: LIP_0785
symbol: tatA-2
gene_biotype: protein_coding
description:
  Preprotein translocase subunit TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.


ensembl_gene_id: LIP_0786
symbol: proA
gene_biotype: protein_coding
description:
  Gamma-glutamyl phosphate reductase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.


ensembl_gene_id: LIP_0787
symbol: proB
gene_biotype: protein_coding
description:
  Gamma-glutamyl kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.


ensembl_gene_id: LIP_0788
symbol: ppc
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle; Belongs to the PEPCase type 1 family.


ensembl_gene_id: LIP_0790
symbol: LIP_0790
gene_biotype: protein_coding
description:
  SAM-dependent methlyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.


ensembl_gene_id: LIP_1014
symbol: LIP_1014
gene_biotype: protein_coding
description:
  Spermidine/putrescine ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.


ensembl_gene_id: LIP_1025
symbol: pcp
gene_biotype: protein_coding
description:
  Peptidase C15; Removes 5-oxoproline from various penultimate amino acid residues except L-proline; Belongs to the peptidase C15 family.


ensembl_gene_id: LIP_1046
symbol: menC
gene_biotype: protein_coding
description:
  O-succinylbenzoate synthase; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB).


ensembl_gene_id: LIP_1088
symbol: LIP_1088
gene_biotype: protein_coding
description:
  Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.


ensembl_gene_id: LIP_1093
symbol: pdxT
gene_biotype: protein_coding
description:
  Glutamine amidotransferase; Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS.


ensembl_gene_id: LIP_1094
symbol: pdxS
gene_biotype: protein_coding
description:
  Pyridoxal biosynthesis protein; Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5- phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively. Belongs to the PdxS/SNZ family.


ensembl_gene_id: LIP_1118
symbol: fabZ
gene_biotype: protein_coding
description:
  3-hydroxyacyl-ACP dehydratase; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.


ensembl_gene_id: LIP_1120
symbol: plsX
gene_biotype: protein_coding
description:
  Phosphate acyltransferase; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.


ensembl_gene_id: LIP_1136
symbol: pqqB
gene_biotype: protein_coding
description:
  Hypothetical protein; May be involved in the transport of PQQ or its precursor to the periplasm; Belongs to the PqqB family.


ensembl_gene_id: LIP_1137
symbol: pqqC
gene_biotype: protein_coding
description:
  Pyrroloquinoline quinone biosynthesis protein PqqC; Ring cyclization and eight-electron oxidation of 3a-(2-amino- 2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline-7,9- dicarboxylic-acid to PQQ.


ensembl_gene_id: LIP_1139
symbol: pqqE
gene_biotype: protein_coding
description:
  Pyrroloquinoline quinone biosynthesis protein PqqE; Catalyzes the cross-linking of a glutamate residue and a tyrosine residue in the PqqA protein as part of the biosynthesis of pyrroloquinoline quinone (PQQ).


ensembl_gene_id: LIP_1146
symbol: moaA
gene_biotype: protein_coding
description:
  Molybdenum cofactor biosynthesis protein MoeA; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.


ensembl_gene_id: LIP_1160
symbol: LIP_1160
gene_biotype: protein_coding
description:
  Succinate dehydrogenase; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.


ensembl_gene_id: LIP_1180
symbol: LIP_1180
gene_biotype: protein_coding
description:
  Cation transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.


ensembl_gene_id: LIP_1182
symbol: ilvE
gene_biotype: protein_coding
description:
  Branched-chain amino acid aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: LIP_1210
symbol: LIP_1210
gene_biotype: protein_coding
description:
  CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: LIP_1211
symbol: LIP_1211
gene_biotype: protein_coding
description:
  FAD dependent oxidoreductase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: LIP_1214
symbol: glpK
gene_biotype: protein_coding
description:
  Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.


ensembl_gene_id: LIP_1215
symbol: plsY
gene_biotype: protein_coding
description:
  Membrane protein; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.


ensembl_gene_id: LIP_1216
symbol: lipA
gene_biotype: protein_coding
description:
  Radical SAM protein; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.


ensembl_gene_id: LIP_1220
symbol: deoC
gene_biotype: protein_coding
description:
  Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.


ensembl_gene_id: LIP_1225
symbol: murA
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.


ensembl_gene_id: LIP_1227
symbol: argC
gene_biotype: protein_coding
description:
  N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.


ensembl_gene_id: LIP_1243
symbol: argJ
gene_biotype: protein_coding
description:
  Ornithine acetyltransferase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family.


ensembl_gene_id: LIP_1244
symbol: argB
gene_biotype: protein_coding
description:
  Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.


ensembl_gene_id: LIP_1255
symbol: ilvC
gene_biotype: protein_coding
description:
  Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate.


ensembl_gene_id: LIP_1256
symbol: LIP_1256
gene_biotype: protein_coding
description:
  3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: LIP_1257
symbol: leuA
gene_biotype: protein_coding
description:
  2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily.


ensembl_gene_id: LIP_1258
symbol: leuB
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.


ensembl_gene_id: LIP_1260
symbol: glmM
gene_biotype: protein_coding
description:
  Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.


ensembl_gene_id: LIP_1262
symbol: acpS
gene_biotype: protein_coding
description:
  ACP synthase; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family.


ensembl_gene_id: LIP_1263
symbol: nnrD
gene_biotype: protein_coding
description:
  Carbohydrate kinase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration.  Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epim [...]


ensembl_gene_id: LIP_1264
symbol: LIP_1264
gene_biotype: protein_coding
description:
  Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.


ensembl_gene_id: LIP_1268
symbol: hemA
gene_biotype: protein_coding
description:
  glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).


ensembl_gene_id: LIP_1270
symbol: hemC
gene_biotype: protein_coding
description:
  Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps.


ensembl_gene_id: LIP_1282
symbol: nagB
gene_biotype: protein_coding
description:
  Glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion.


ensembl_gene_id: LIP_1286
symbol: LIP_1286
gene_biotype: protein_coding
description:
  Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: LIP_1288
symbol: tpiA
gene_biotype: protein_coding
description:
  Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.


ensembl_gene_id: LIP_1289
symbol: eno
gene_biotype: protein_coding
description:
  Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.


ensembl_gene_id: LIP_1290
symbol: LIP_1290
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.


ensembl_gene_id: LIP_1291
symbol: hppA
gene_biotype: protein_coding
description:
  Potassium transporter; Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na(+) movement across the membrane. Belongs to the H(+)-translocating pyrophosphatase (TC 3.A.10) family. K(+)-stimulated subfamily.


ensembl_gene_id: LIP_1294
symbol: smpB
gene_biotype: protein_coding
description:
  Single-stranded DNA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome t [...]


ensembl_gene_id: LIP_1297
symbol: murD
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.


ensembl_gene_id: LIP_1298
symbol: rph
gene_biotype: protein_coding
description:
  Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation.


ensembl_gene_id: LIP_1299
symbol: LIP_1299
gene_biotype: protein_coding
description:
  Deoxyribonucleotide triphosphate pyrophosphatase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.


ensembl_gene_id: LIP_1327
symbol: tig
gene_biotype: protein_coding
description:
  Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.


ensembl_gene_id: LIP_1328
symbol: clpP
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: LIP_1329
symbol: clpX
gene_biotype: protein_coding
description:
  ATP-dependent protease; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.


ensembl_gene_id: LIP_1347
symbol: LIP_1347
gene_biotype: protein_coding
description:
  Transcriptional initiation protein Tat; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: LIP_1354
symbol: LIP_1354
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.


ensembl_gene_id: LIP_1371
symbol: LIP_1371
gene_biotype: protein_coding
description:
  Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.


ensembl_gene_id: LIP_1377
symbol: LIP_1377
gene_biotype: protein_coding
description:
  RNA methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.


ensembl_gene_id: LIP_1382
symbol: thiL
gene_biotype: protein_coding
description:
  Thiamine-monophosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family.


ensembl_gene_id: LIP_1383
symbol: thiE
gene_biotype: protein_coding
description:
  Thiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.


ensembl_gene_id: LIP_1384
symbol: thiM
gene_biotype: protein_coding
description:
  Hydroxyethylthiazole kinase; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family.


ensembl_gene_id: LIP_1401
symbol: LIP_1401
gene_biotype: protein_coding
description:
  Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.


ensembl_gene_id: LIP_1407
symbol: lgt
gene_biotype: protein_coding
description:
  Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.


ensembl_gene_id: LIP_1414
symbol: LIP_1414
gene_biotype: protein_coding
description:
  Hypothetical protein; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH.


ensembl_gene_id: LIP_1427
symbol: gltX
gene_biotype: protein_coding
description:
  glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.


ensembl_gene_id: LIP_1428
symbol: LIP_1428
gene_biotype: protein_coding
description:
  5'-methylthioadenosine phosphorylase; Purine nucleoside phosphorylase which is highly specific for 6-oxopurine nucleosides. Cleaves guanosine or inosine to respective bases and sugar-1-phosphate molecules. Involved in purine salvage.


ensembl_gene_id: LIP_1438
symbol: accD
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase subunit beta; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.


ensembl_gene_id: LIP_1439
symbol: accA
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.


ensembl_gene_id: LIP_1442
symbol: LIP_1442
gene_biotype: protein_coding
description:
  Glutamate-1-semialdehyde 2,1-aminomutase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: LIP_1465
symbol: cas1
gene_biotype: protein_coding
description:
  CRISPR-associated protein Cas1; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.


ensembl_gene_id: LIP_1485
symbol: LIP_1485
gene_biotype: protein_coding
description:
  2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.


ensembl_gene_id: LIP_1488
symbol: LIP_1488
gene_biotype: protein_coding
description:
  Ribonucleoside reductase class II; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.


ensembl_gene_id: LIP_1497
symbol: polA
gene_biotype: protein_coding
description:
  DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.


ensembl_gene_id: LIP_1498
symbol: LIP_1498
gene_biotype: protein_coding
description:
  formamidopyrimidine-DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates.


ensembl_gene_id: LIP_1499
symbol: coaE
gene_biotype: protein_coding
description:
  dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.


ensembl_gene_id: LIP_1515
symbol: LIP_1515
gene_biotype: protein_coding
description:
  Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.


ensembl_gene_id: LIP_1536
symbol: groL
gene_biotype: protein_coding
description:
  Molecular chaperone GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.


ensembl_gene_id: LIP_1537
symbol: mdh
gene_biotype: protein_coding
description:
  Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.


ensembl_gene_id: LIP_1540
symbol: ileS
gene_biotype: protein_coding
description:
  isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily.


ensembl_gene_id: LIP_1543
symbol: LIP_1543
gene_biotype: protein_coding
description:
  Lipoprotein signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins.


ensembl_gene_id: LIP_1544
symbol: LIP_1544
gene_biotype: protein_coding
description:
  Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: LIP_1565
symbol: pyrR
gene_biotype: protein_coding
description:
  Uracil phosphoribosyltransferase; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant; Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrR subfamily.


ensembl_gene_id: LIP_1569
symbol: purE
gene_biotype: protein_coding
description:
  N5-carboxyaminoimidazole ribonucleotide mutase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).


ensembl_gene_id: LIP_1572
symbol: purS
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to assist in  [...]


ensembl_gene_id: LIP_1574
symbol: purL
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine; Belongs to the FGAMS family.


ensembl_gene_id: LIP_1576
symbol: purN
gene_biotype: protein_coding
description:
  Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.


ensembl_gene_id: LIP_1587
symbol: rpoZ
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.


ensembl_gene_id: LIP_1588
symbol: priA
gene_biotype: protein_coding
description:
  Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.


ensembl_gene_id: LIP_1589
symbol: def
gene_biotype: protein_coding
description:
  Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.


ensembl_gene_id: LIP_1590
symbol: fmt
gene_biotype: protein_coding
description:
  methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.


ensembl_gene_id: LIP_1591
symbol: LIP_1591
gene_biotype: protein_coding
description:
  16S rRNA methyltransferase; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.


ensembl_gene_id: LIP_1592
symbol: LIP_1592
gene_biotype: protein_coding
description:
  Chemotaxis protein CheY; May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process.


ensembl_gene_id: LIP_1600
symbol: rsgA
gene_biotype: protein_coding
description:
  GTPase A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.


ensembl_gene_id: LIP_1608
symbol: coaD
gene_biotype: protein_coding
description:
  Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.


ensembl_gene_id: LIP_1615
symbol: fabH
gene_biotype: protein_coding
description:
  3-oxoacyl-ACP synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.


ensembl_gene_id: LIP_1617
symbol: LIP_1617
gene_biotype: protein_coding
description:
  3-ketoacyl-ACP reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: LIP_1619
symbol: LIP_1619
gene_biotype: protein_coding
description:
  3-oxoacyl-ACP synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.


ensembl_gene_id: LIP_1620
symbol: rnc
gene_biotype: protein_coding
description:
  Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.


ensembl_gene_id: LIP_1625
symbol: smc
gene_biotype: protein_coding
description:
  Chromosome segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family.


ensembl_gene_id: LIP_1626
symbol: ftsY
gene_biotype: protein_coding
description:
  Cell division protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC).


ensembl_gene_id: LIP_1627
symbol: LIP_1627
gene_biotype: protein_coding
description:
  DNA-binding protein; Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a regulatory protein.


ensembl_gene_id: LIP_1628
symbol: ffh
gene_biotype: protein_coding
description:
  Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily.


ensembl_gene_id: LIP_1631
symbol: rimM
gene_biotype: protein_coding
description:
  Ribosome maturation factor RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.


ensembl_gene_id: LIP_1632
symbol: trmD
gene_biotype: protein_coding
description:
  tRNA (guanine-N1)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.


ensembl_gene_id: LIP_1633
symbol: rplS
gene_biotype: protein_coding
description:
  50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.


ensembl_gene_id: LIP_1634
symbol: LIP_1634
gene_biotype: protein_coding
description:
  GTPase YlqF; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.


ensembl_gene_id: LIP_1645
symbol: topA
gene_biotype: protein_coding
description:
  DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]


ensembl_gene_id: LIP_1646
symbol: hslV
gene_biotype: protein_coding
description:
  ATP-dependent protease subunit HslV; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery.


ensembl_gene_id: LIP_1647
symbol: hslU
gene_biotype: protein_coding
description:
  Clp protease ATPase; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis.


ensembl_gene_id: LIP_1648
symbol: LIP_1648
gene_biotype: protein_coding
description:
  Flagellar basal body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.


ensembl_gene_id: LIP_1651
symbol: LIP_1651
gene_biotype: protein_coding
description:
  Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.


ensembl_gene_id: LIP_1663
symbol: LIP_1663
gene_biotype: protein_coding
description:
  Hypothetical protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.


ensembl_gene_id: LIP_1667
symbol: fliP
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.


ensembl_gene_id: LIP_1668
symbol: fliQ
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.


ensembl_gene_id: LIP_1669
symbol: LIP_1669
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family.


ensembl_gene_id: LIP_1670
symbol: flhB
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family.


ensembl_gene_id: LIP_1671
symbol: flhA
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.


ensembl_gene_id: LIP_1675
symbol: LIP_1675
gene_biotype: protein_coding
description:
  RNA polymerase sigma 70; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: LIP_1677
symbol: tsf
gene_biotype: protein_coding
description:
  Elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.


ensembl_gene_id: LIP_1679
symbol: frr
gene_biotype: protein_coding
description:
  Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.


ensembl_gene_id: LIP_1681
symbol: LIP_1681
gene_biotype: protein_coding
description:
  UDP pyrophosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.


ensembl_gene_id: LIP_1684
symbol: dxr
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family.


ensembl_gene_id: LIP_1686
symbol: polC
gene_biotype: protein_coding
description:
  DNA polymerase III subunit alpha; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: LIP_1687
symbol: rimP
gene_biotype: protein_coding
description:
  Ribosome maturation factor RimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.


ensembl_gene_id: LIP_1688
symbol: nusA
gene_biotype: protein_coding
description:
  Transcription termination factor NusA; Participates in both transcription termination and antitermination.


ensembl_gene_id: LIP_1692
symbol: infB
gene_biotype: protein_coding
description:
  Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.


ensembl_gene_id: LIP_1694
symbol: rbfA
gene_biotype: protein_coding
description:
  Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.


ensembl_gene_id: LIP_1696
symbol: truB
gene_biotype: protein_coding
description:
  tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.


ensembl_gene_id: LIP_1698
symbol: rpsO
gene_biotype: protein_coding
description:
  30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.


ensembl_gene_id: LIP_1699
symbol: pnp
gene_biotype: protein_coding
description:
  Polynucleotide phosphorylase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.


ensembl_gene_id: LIP_1703
symbol: deoB
gene_biotype: protein_coding
description:
  Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family.


ensembl_gene_id: LIP_1717
symbol: thiI
gene_biotype: protein_coding
description:
  Thiamine biosynthesis protein ThiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS.


ensembl_gene_id: LIP_1727
symbol: miaB
gene_biotype: protein_coding
description:
  (dimethylallyl)adenosine tRNA methylthiotransferase; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.


ensembl_gene_id: LIP_1728
symbol: mutS
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.


ensembl_gene_id: LIP_1729
symbol: mutL
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.


ensembl_gene_id: LIP_1731
symbol: miaA
gene_biotype: protein_coding
description:
  tRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.


ensembl_gene_id: LIP_1736
symbol: dapF
gene_biotype: protein_coding
description:
  Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.


ensembl_gene_id: LIP_1740
symbol: trpD
gene_biotype: protein_coding
description:
  Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).


ensembl_gene_id: LIP_1744
symbol: trpA
gene_biotype: protein_coding
description:
  Tryptophan synthase subunit alpha; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.


ensembl_gene_id: LIP_1747
symbol: speH
gene_biotype: protein_coding
description:
  S-adenosylmethionine decarboxylase; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the prokaryotic AdoMetDC family. Type 1 subfamily.


ensembl_gene_id: LIP_1750
symbol: surE
gene_biotype: protein_coding
description:
  Stationary phase survival protein SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.


ensembl_gene_id: LIP_1753
symbol: lexA
gene_biotype: protein_coding
description:
  XRE family transcriptional regulator; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair.


ensembl_gene_id: LIP_1765
symbol: LIP_1765
gene_biotype: protein_coding
description:
  Putrescine--2-oxoglutarate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: LIP_1771
symbol: thrB
gene_biotype: protein_coding
description:
  Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily.


ensembl_gene_id: LIP_1772
symbol: LIP_1772
gene_biotype: protein_coding
description:
  Threonine synthase; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine.


ensembl_gene_id: LIP_1774
symbol: LIP_1774
gene_biotype: protein_coding
description:
  DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.


ensembl_gene_id: LIP_1776
symbol: gpsA
gene_biotype: protein_coding
description:
  Ribosome-associated GTPase EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: LIP_1787
symbol: hisC
gene_biotype: protein_coding
description:
  Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.


ensembl_gene_id: LIP_1792
symbol: LIP_1792
gene_biotype: protein_coding
description:
  Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: LIP_1793
symbol: LIP_1793
gene_biotype: protein_coding
description:
  Hypothetical protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: LIP_1794
symbol: lysA
gene_biotype: protein_coding
description:
  Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.


ensembl_gene_id: LIP_1805
symbol: recA
gene_biotype: protein_coding
description:
  Recombinase RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.


ensembl_gene_id: LIP_1806
symbol: LIP_1806
gene_biotype: protein_coding
description:
  2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family.


ensembl_gene_id: LIP_1809
symbol: LIP_1809
gene_biotype: protein_coding
description:
  Formate dehydrogenase accessory protein FdhE; Necessary for formate dehydrogenase activity. Belongs to the FdhE family.


ensembl_gene_id: LIP_1817
symbol: nuoA
gene_biotype: protein_coding
description:
  NADH:ubiquinone oxidoreductase subunit A; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family.


ensembl_gene_id: LIP_1818
symbol: nuoB
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit B; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: LIP_1819
symbol: nuoC
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit C; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family.


ensembl_gene_id: LIP_1820
symbol: nuoD
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family.


ensembl_gene_id: LIP_1821
symbol: nuoH
gene_biotype: protein_coding
description:
  NADH:ubiquinone oxidoreductase subunit H; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone.


ensembl_gene_id: LIP_1822
symbol: nuoI
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: LIP_1823
symbol: LIP_1823
gene_biotype: protein_coding
description:
  NADH:ubiquinone oxidoreductase subunit J; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: LIP_1824
symbol: nuoK
gene_biotype: protein_coding
description:
  NADH:ubiquinone oxidoreductase subunit K; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family.


ensembl_gene_id: LIP_1827
symbol: nuoN
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family.


ensembl_gene_id: LIP_1849
symbol: hslO
gene_biotype: protein_coding
description:
  Heat shock protein Hsp33; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress.


ensembl_gene_id: LIP_1853
symbol: nrdR
gene_biotype: protein_coding
description:
  NrdR family transcriptional regulator; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family.


ensembl_gene_id: LIP_1859
symbol: ftsZ
gene_biotype: protein_coding
description:
  Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.


ensembl_gene_id: LIP_1864
symbol: murG
gene_biotype: protein_coding
description:
  Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.


ensembl_gene_id: LIP_1866
symbol: mraY
gene_biotype: protein_coding
description:
  phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.


ensembl_gene_id: LIP_1867
symbol: murF
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.


ensembl_gene_id: LIP_1868
symbol: murE
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramyl peptide synthase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily.


ensembl_gene_id: LIP_1871
symbol: rsmH
gene_biotype: protein_coding
description:
  16S rRNA methyltransferase; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.


ensembl_gene_id: LIP_1889
symbol: LIP_1889
gene_biotype: protein_coding
description:
  Alkylhydroperoxidase; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.


ensembl_gene_id: LIP_1915
symbol: LIP_1915
gene_biotype: protein_coding
description:
  Thiamine biosynthesis protein ApbE; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.


ensembl_gene_id: LIP_1926
symbol: aroQ
gene_biotype: protein_coding
description:
  3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.


ensembl_gene_id: LIP_1929
symbol: LIP_1929
gene_biotype: protein_coding
description:
  Amino acid transporter; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: LIP_1932
symbol: rbsK
gene_biotype: protein_coding
description:
  Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.


ensembl_gene_id: LIP_1933
symbol: rbsA-2
gene_biotype: protein_coding
description:
  D-ribose transporter ATP binding protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.


ensembl_gene_id: LIP_1943
symbol: rbsA-3
gene_biotype: protein_coding
description:
  Sugar ABC transporter ATPase; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.


ensembl_gene_id: LIP_1965
symbol: ispG
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family.


ensembl_gene_id: LIP_1966
symbol: pxpA
gene_biotype: protein_coding
description:
  LamB/YcsF family protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.


ensembl_gene_id: LIP_1968
symbol: metE
gene_biotype: protein_coding
description:
  5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family.


ensembl_gene_id: LIP_1981
symbol: LIP_1981
gene_biotype: protein_coding
description:
  L-cystine transporter tcyP; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: LIP_2018
symbol: rsgA-2
gene_biotype: protein_coding
description:
  GTPase RsgA; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.


ensembl_gene_id: LIP_2051
symbol: LIP_2051
gene_biotype: protein_coding
description:
  Sugar ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: LIP_2091
symbol: LIP_2091
gene_biotype: protein_coding
description:
  4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: LIP_2129
symbol: LIP_2129
gene_biotype: protein_coding
description:
  dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.


ensembl_gene_id: LIP_2130
symbol: LIP_2130
gene_biotype: protein_coding
description:
  Spore coat protein; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.


ensembl_gene_id: LIP_2141
symbol: LIP_2141
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.


ensembl_gene_id: LIP_2172
symbol: LIP_2172
gene_biotype: protein_coding
description:
  Acetaldehyde dehydrogenase; Catalyzes the conversion of acetaldehyde to acetyl-CoA, using NAD(+) and coenzyme A. Is the final enzyme in the meta-cleavage pathway for the degradation of aromatic compounds.


ensembl_gene_id: LIP_2173
symbol: LIP_2173
gene_biotype: protein_coding
description:
  4-hydroxy-2-oxovalerate aldolase; Catalyzes the retro-aldol cleavage of 4-hydroxy-2- oxopentanoate to pyruvate and acetaldehyde. Is involved in the meta- cleavage pathway for the degradation of aromatic compounds. Belongs to the 4-hydroxy-2-oxovalerate aldolase family.


ensembl_gene_id: LIP_2191
symbol: leuD-2
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydratase small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 2 subfamily.


ensembl_gene_id: LIP_2192
symbol: leuC-2
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydratase large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.


ensembl_gene_id: LIP_2245
symbol: fcl
gene_biotype: protein_coding
description:
  GDP-L-fucose synthase; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction.


ensembl_gene_id: LIP_2246
symbol: gmd
gene_biotype: protein_coding
description:
  GDP-D-mannose dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.


ensembl_gene_id: LIP_2263
symbol: gmd-2
gene_biotype: protein_coding
description:
  GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.


ensembl_gene_id: LIP_2338
symbol: nanE
gene_biotype: protein_coding
description:
  N-acetylmannosamine-6-phosphate 2-epimerase; Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N- acetylglucosamine-6-phosphate (GlcNAc-6-P).


ensembl_gene_id: LIP_2381
symbol: LIP_2381
gene_biotype: protein_coding
description:
  Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.


ensembl_gene_id: LIP_2394
symbol: ubiX
gene_biotype: protein_coding
description:
  3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.


ensembl_gene_id: LIP_2413
symbol: LIP_2413
gene_biotype: protein_coding
description:
  Membrane protein; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage; Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily.


ensembl_gene_id: LIP_2419
symbol: mtnA
gene_biotype: protein_coding
description:
  Methylthioribose-1-phosphate isomerase; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P).


ensembl_gene_id: LIP_2421
symbol: menE
gene_biotype: protein_coding
description:
  O-succinylbenzoic acid--CoA ligase; Converts 2-succinylbenzoate (OSB) to 2-succinylbenzoyl-CoA (OSB-CoA); Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily.


ensembl_gene_id: LIP_2422
symbol: menA
gene_biotype: protein_coding
description:
  1,4-dihydroxy-2-naphthoate prenyltransferase; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily.


ensembl_gene_id: LIP_2423
symbol: menB
gene_biotype: protein_coding
description:
  Dihydroxynaphthoic acid synthetase; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA).


ensembl_gene_id: LIP_2424
symbol: menH
gene_biotype: protein_coding
description:
  Esterase; Catalyzes a proton abstraction reaction that results in 2,5- elimination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC) and the formation of 2-succinyl-6- hydroxy-2,4-cyclohexadiene-1-carboxylate (SHCHC).


ensembl_gene_id: LIP_2425
symbol: menD
gene_biotype: protein_coding
description:
  2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Belongs to the TPP enzyme family. MenD subfamily.


ensembl_gene_id: LIP_2457
symbol: murQ
gene_biotype: protein_coding
description:
  N-acetylmuramic acid-6-phosphate etherase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate.


ensembl_gene_id: LIP_2462
symbol: vapC
gene_biotype: protein_coding
description:
  Twitching motility protein PilT; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.


ensembl_gene_id: LIP_2469
symbol: sigA
gene_biotype: protein_coding
description:
  RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.


ensembl_gene_id: LIP_2470
symbol: dnaG
gene_biotype: protein_coding
description:
  DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.


ensembl_gene_id: LIP_2477
symbol: ruvB
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.


ensembl_gene_id: LIP_2478
symbol: ruvA
gene_biotype: protein_coding
description:
  Holliday junction ATP-dependent DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.


ensembl_gene_id: LIP_2479
symbol: ruvC
gene_biotype: protein_coding
description:
  Holliday junction resolvase; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.


ensembl_gene_id: LIP_2490
symbol: tyrS
gene_biotype: protein_coding
description:
  tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 2 subfamily.


ensembl_gene_id: LIP_2492
symbol: mutS2
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.


ensembl_gene_id: LIP_2497
symbol: pheT
gene_biotype: protein_coding
description:
  phenylalanyl-tRNA synthetase subunit beta; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.


ensembl_gene_id: LIP_2498
symbol: pheS
gene_biotype: protein_coding
description:
  phenylalanyl-tRNA synthetase subunit alpha; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.


ensembl_gene_id: LIP_2501
symbol: LIP_2501
gene_biotype: protein_coding
description:
  RNA methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: LIP_2503
symbol: rplT
gene_biotype: protein_coding
description:
  50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.


ensembl_gene_id: LIP_2505
symbol: infC
gene_biotype: protein_coding
description:
  Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.


ensembl_gene_id: LIP_2506
symbol: thrS
gene_biotype: protein_coding
description:
  threonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr).


ensembl_gene_id: LIP_2514
symbol: ku
gene_biotype: protein_coding
description:
  DNA repair protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.


ensembl_gene_id: LIP_2525
symbol: pfkA
gene_biotype: protein_coding
description:
  6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. Mixed-substrate PFK group III subfamily.


ensembl_gene_id: LIP_2528
symbol: fbp
gene_biotype: protein_coding
description:
  Fructose-1 6-bisphosphatase; Catalyzes two subsequent steps in gluconeogenesis: the aldol condensation of dihydroxyacetone phosphate (DHAP) and glyceraldehyde-3- phosphate (GA3P) to fructose-1,6-bisphosphate (FBP), and the dephosphorylation of FBP to fructose-6-phosphate (F6P).


ensembl_gene_id: LIP_2544
symbol: proC
gene_biotype: protein_coding
description:
  Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.


ensembl_gene_id: LIP_2545
symbol: sepF
gene_biotype: protein_coding
description:
  Cell division protein SepF; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA.


ensembl_gene_id: LIP_2546
symbol: LIP_2546
gene_biotype: protein_coding
description:
  Hypothetical protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.


ensembl_gene_id: LIP_2548
symbol: uppP
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.


ensembl_gene_id: LIP_2563
symbol: rnj
gene_biotype: protein_coding
description:
  Ribonuclease J; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay.


ensembl_gene_id: LIP_2564
symbol: dapA
gene_biotype: protein_coding
description:
  Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).


ensembl_gene_id: LIP_2566
symbol: asd
gene_biotype: protein_coding
description:
  Aspartate semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.


ensembl_gene_id: LIP_2569
symbol: dapB
gene_biotype: protein_coding
description:
  Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.


ensembl_gene_id: LIP_2589
symbol: dxs
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.


ensembl_gene_id: LIP_2592
symbol: xseB
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.


ensembl_gene_id: LIP_2593
symbol: xseA
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.


ensembl_gene_id: LIP_2594
symbol: nusB
gene_biotype: protein_coding
description:
  Transcription antitermination protein NusB; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.


ensembl_gene_id: LIP_2598
symbol: LIP_2598
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase biotin carboxylase subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: LIP_2599
symbol: LIP_2599
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: LIP_2609
symbol: efp
gene_biotype: protein_coding
description:
  Elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.


ensembl_gene_id: LIP_2611
symbol: aroK
gene_biotype: protein_coding
description:
  3-dehydroquinate synthase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate.


ensembl_gene_id: LIP_2612
symbol: aroC
gene_biotype: protein_coding
description:
  Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.


ensembl_gene_id: LIP_2615
symbol: mltG
gene_biotype: protein_coding
description:
  Aminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family.


ensembl_gene_id: LIP_2616
symbol: LIP_2616
gene_biotype: protein_coding
description:
  Holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.


ensembl_gene_id: LIP_2618
symbol: alaS
gene_biotype: protein_coding
description:
  alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.


ensembl_gene_id: LIP_2621
symbol: mnmA
gene_biotype: protein_coding
description:
  tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.


ensembl_gene_id: LIP_2626
symbol: aspS
gene_biotype: protein_coding
description:
  aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.


ensembl_gene_id: LIP_2631
symbol: dtd
gene_biotype: protein_coding
description:
  D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family.


ensembl_gene_id: LIP_2632
symbol: LIP_2632
gene_biotype: protein_coding
description:
  (p)ppGpp synthetase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.


ensembl_gene_id: LIP_2633
symbol: apt
gene_biotype: protein_coding
description:
  Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.


ensembl_gene_id: LIP_2637
symbol: secF
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: LIP_2638
symbol: secD
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: LIP_2641
symbol: tgt
gene_biotype: protein_coding
description:
  Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form t [...]


ensembl_gene_id: LIP_2642
symbol: queA
gene_biotype: protein_coding
description:
  S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).


ensembl_gene_id: LIP_2643
symbol: LIP_2643
gene_biotype: protein_coding
description:
  Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: LIP_2645
symbol: ybeY
gene_biotype: protein_coding
description:
  16S rRNA maturation RNase YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.


ensembl_gene_id: LIP_2659
symbol: prmA
gene_biotype: protein_coding
description:
  50S ribosomal protein L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family.


ensembl_gene_id: LIP_2660
symbol: dnaJ
gene_biotype: protein_coding
description:
  Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...]


ensembl_gene_id: LIP_2662
symbol: grpE
gene_biotype: protein_coding
description:
  Co-chaperone GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-depend [...]


ensembl_gene_id: LIP_2663
symbol: hrcA
gene_biotype: protein_coding
description:
  HrcA family transcriptional regulator; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons.


ensembl_gene_id: LIP_2665
symbol: LIP_2665
gene_biotype: protein_coding
description:
  Coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: LIP_2666
symbol: lepA
gene_biotype: protein_coding
description:
  Elongation factor 4; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.


ensembl_gene_id: LIP_2667
symbol: murJ
gene_biotype: protein_coding
description:
  Membrane protein; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.


ensembl_gene_id: LIP_2675
symbol: crcB
gene_biotype: protein_coding
description:
  Camphor resistance protein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.


ensembl_gene_id: LIP_2686
symbol: pckA
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate carboxykinase; Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA.


ensembl_gene_id: LIP_2726
symbol: vapC-3
gene_biotype: protein_coding
description:
  Hypothetical protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.


ensembl_gene_id: LIP_2755
symbol: LIP_2755
gene_biotype: protein_coding
description:
  Queuosine biosynthesis protein; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).


ensembl_gene_id: LIP_2773
symbol: rsfS
gene_biotype: protein_coding
description:
  Hypothetical protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.


ensembl_gene_id: LIP_2776
symbol: nadD
gene_biotype: protein_coding
description:
  Nicotinic acid mononucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).


ensembl_gene_id: LIP_2777
symbol: obg
gene_biotype: protein_coding
description:
  GTPase CgtA; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.


ensembl_gene_id: LIP_2780
symbol: rplU
gene_biotype: protein_coding
description:
  50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.


ensembl_gene_id: LIP_2784
symbol: minE
gene_biotype: protein_coding
description:
  Cell division topological specificity factor; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell.


ensembl_gene_id: LIP_2786
symbol: minC
gene_biotype: protein_coding
description:
  Septum site-determining protein MinC; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family.


ensembl_gene_id: LIP_2792
symbol: LIP_2792
gene_biotype: protein_coding
description:
  Septum formation protein Maf; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.


ensembl_gene_id: LIP_2793
symbol: LIP_2793
gene_biotype: protein_coding
description:
  ATP-binding protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.


ensembl_gene_id: LIP_2796
symbol: LIP_2796
gene_biotype: protein_coding
description:
  Corrinoid ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: LIP_2802
symbol: valS
gene_biotype: protein_coding
description:
  valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.


ensembl_gene_id: LIP_2804
symbol: LIP_2804
gene_biotype: protein_coding
description:
  RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: LIP_2807
symbol: LIP_2807
gene_biotype: protein_coding
description:
  Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins.


ensembl_gene_id: LIP_2809
symbol: gatB
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily.


ensembl_gene_id: LIP_2810
symbol: gatA
gene_biotype: protein_coding
description:
  glutamyl-tRNA(Gln) amidotransferase; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).


ensembl_gene_id: LIP_2811
symbol: gatC
gene_biotype: protein_coding
description:
  glutamyl-tRNA amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.


ensembl_gene_id: LIP_2812
symbol: ligA
gene_biotype: protein_coding
description:
  NAD-dependent DNA ligase LigA; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA; Belongs to the NAD-dependent DNA ligase family. LigA subfamily.


ensembl_gene_id: LIP_2819
symbol: hisI
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit; In the C-terminal section; belongs to the PRA-PH family.


ensembl_gene_id: LIP_2820
symbol: hisA
gene_biotype: protein_coding
description:
  1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide isomerase.


ensembl_gene_id: LIP_2821
symbol: hisH
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.


ensembl_gene_id: LIP_2823
symbol: hisD
gene_biotype: protein_coding
description:
  Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.


ensembl_gene_id: LIP_2824
symbol: hisG
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Short subfamily.


ensembl_gene_id: LIP_2825
symbol: hisZ
gene_biotype: protein_coding
description:
  Nitrile hydratase; Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine.


ensembl_gene_id: LIP_2830
symbol: moaC
gene_biotype: protein_coding
description:
  Molybdenum cofactor biosynthesis protein MoaC; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family.


ensembl_gene_id: LIP_2831
symbol: LIP_2831
gene_biotype: protein_coding
description:
  Molybdenum cofactor biosynthesis protein; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.


ensembl_gene_id: LIP_2837
symbol: tsaD
gene_biotype: protein_coding
description:
  tRNA threonylcarbamoyladenosine modification protein TsaD; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.


ensembl_gene_id: LIP_2843
symbol: LIP_2843
gene_biotype: protein_coding
description:
  Toxin-antitoxin system toxin component MazF family; Toxic component of a type II toxin-antitoxin (TA) system.


ensembl_gene_id: LIP_2869
symbol: LIP_2869
gene_biotype: protein_coding
description:
  Hypothetical protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: LIP_2928
symbol: nadK
gene_biotype: protein_coding
description:
  Inorganic polyphosphate kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.


ensembl_gene_id: LIP_2929
symbol: uvrC
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.


ensembl_gene_id: LIP_2930
symbol: uvrA
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.


ensembl_gene_id: LIP_2931
symbol: uvrB
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate  [...]


ensembl_gene_id: LIP_2940
symbol: menG
gene_biotype: protein_coding
description:
  Ubiquinone biosynthesis protein; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2).


ensembl_gene_id: LIP_2945
symbol: prfB
gene_biotype: protein_coding
description:
  Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.


ensembl_gene_id: LIP_2946
symbol: secA
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family.


ensembl_gene_id: LIP_2951
symbol: hpf
gene_biotype: protein_coding
description:
  Hypothetical protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.


ensembl_gene_id: LIP_2964
symbol: LIP_2964
gene_biotype: protein_coding
description:
  Flagellar hook-associated 2 domain-containing protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.


ensembl_gene_id: LIP_2966
symbol: csrA
gene_biotype: protein_coding
description:
  Carbon storage regulator; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW.


ensembl_gene_id: LIP_2967
symbol: fliW
gene_biotype: protein_coding
description:
  Flagellar assembly protein FliW; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum.


ensembl_gene_id: LIP_2975
symbol: recD2
gene_biotype: protein_coding
description:
  Helicase; DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity; Belongs to the RecD family. RecD-like subfamily.


ensembl_gene_id: LIP_2980
symbol: psuG
gene_biotype: protein_coding
description:
  Pseudouridine-5'-phosphate glycosidase; Catalyzes the reversible cleavage of pseudouridine 5'- phosphate (PsiMP) to ribose 5-phosphate and uracil. Functions biologically in the cleavage direction, as part of a pseudouridine degradation pathway; Belongs to the pseudouridine-5'-phosphate glycosidase family.


ensembl_gene_id: LIP_2985
symbol: ahcY
gene_biotype: protein_coding
description:
  S-adenosyl-L-homocysteine hydrolase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.


ensembl_gene_id: LIP_2986
symbol: metK
gene_biotype: protein_coding
description:
  S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.


ensembl_gene_id: LIP_3007
symbol: nfo
gene_biotype: protein_coding
description:
  Endonuclease IV; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin.


ensembl_gene_id: LIP_3008
symbol: glmS
gene_biotype: protein_coding
description:
  Glutamine amidotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.


ensembl_gene_id: LIP_3024
symbol: birA
gene_biotype: protein_coding
description:
  biotin-(acetyl-CoA carboxylase) ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.


ensembl_gene_id: LIP_3037
symbol: pstB
gene_biotype: protein_coding
description:
  Phosphate ABC transporter ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.


ensembl_gene_id: LIP_3039
symbol: LIP_3039
gene_biotype: protein_coding
description:
  Phosphate transporter permease subunit PstC; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: LIP_3050
symbol: LIP_3050
gene_biotype: protein_coding
description:
  Resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family.


ensembl_gene_id: LIP_3061
symbol: LIP_3061
gene_biotype: protein_coding
description:
  lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: LIP_3063
symbol: LIP_3063
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: LIP_3065
symbol: LIP_3065
gene_biotype: protein_coding
description:
  UDP-3-0-acyl N-acetylglucosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis. Belongs to the LpxC family.


ensembl_gene_id: LIP_3069
symbol: lpxD
gene_biotype: protein_coding
description:
  UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily.


ensembl_gene_id: LIP_3076
symbol: flgI
gene_biotype: protein_coding
description:
  Flagellar basal body P-ring biosynthesis protein FlgA; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.


ensembl_gene_id: LIP_3077
symbol: flgH
gene_biotype: protein_coding
description:
  Flagellar L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.


ensembl_gene_id: LIP_3085
symbol: atpC
gene_biotype: protein_coding
description:
  F0F1 ATP synthase subunit epsilon; Produces ATP from ADP in the presence of a proton gradient across the membrane.


ensembl_gene_id: LIP_3086
symbol: atpD
gene_biotype: protein_coding
description:
  F0F1 ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.


ensembl_gene_id: LIP_3087
symbol: atpG
gene_biotype: protein_coding
description:
  F0F1 ATP synthase subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.


ensembl_gene_id: LIP_3088
symbol: atpA
gene_biotype: protein_coding
description:
  F0F1 ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.


ensembl_gene_id: LIP_3089
symbol: atpH
gene_biotype: protein_coding
description:
  F0F1 ATP synthase subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: LIP_3090
symbol: atpF
gene_biotype: protein_coding
description:
  F0F1 ATP synthase subunit B; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.


ensembl_gene_id: LIP_3092
symbol: atpB
gene_biotype: protein_coding
description:
  F0F1 ATP synthase subunit A; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.


ensembl_gene_id: LIP_3096
symbol: upp
gene_biotype: protein_coding
description:
  Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.


ensembl_gene_id: LIP_3097
symbol: LIP_3097
gene_biotype: protein_coding
description:
  Ribose-5-phosphate isomerase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.


ensembl_gene_id: LIP_3099
symbol: LIP_3099
gene_biotype: protein_coding
description:
  tRNA threonylcarbamoyladenosine biosynthesis protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.


ensembl_gene_id: LIP_3100
symbol: prmC
gene_biotype: protein_coding
description:
  Restriction endonuclease subunit M; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.


ensembl_gene_id: LIP_3101
symbol: prfA
gene_biotype: protein_coding
description:
  Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.


ensembl_gene_id: LIP_3103
symbol: hflX
gene_biotype: protein_coding
description:
  GTPase HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.


ensembl_gene_id: LIP_3104
symbol: dinB
gene_biotype: protein_coding
description:
  DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.


ensembl_gene_id: LIP_3110
symbol: LIP_3110
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit J; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: LIP_3111
symbol: nuoI-2
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: LIP_3113
symbol: LIP_3113
gene_biotype: protein_coding
description:
  NADH dehydrogenase I subunit G; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family.


ensembl_gene_id: LIP_3114
symbol: LIP_3114
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family.


ensembl_gene_id: LIP_3118
symbol: nuoB-2
gene_biotype: protein_coding
description:
  NADH dehydrogenase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: LIP_3119
symbol: LIP_3119
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit 3; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain.


ensembl_gene_id: LIP_3124
symbol: LIP_3124
gene_biotype: protein_coding
description:
  Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives.


ensembl_gene_id: LIP_3129
symbol: ackA
gene_biotype: protein_coding
description:
  Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.


ensembl_gene_id: LIP_3136
symbol: LIP_3136
gene_biotype: protein_coding
description:
  cob(I)yrinic acid a c-diamide adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family.


ensembl_gene_id: LIP_3140
symbol: greA
gene_biotype: protein_coding
description:
  Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.


ensembl_gene_id: LIP_3143
symbol: rho
gene_biotype: protein_coding
description:
  Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.


ensembl_gene_id: LIP_3146
symbol: pyrG
gene_biotype: protein_coding
description:
  CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.


ensembl_gene_id: LIP_3149
symbol: speE
gene_biotype: protein_coding
description:
  Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.


ensembl_gene_id: LIP_3161
symbol: LIP_3161
gene_biotype: protein_coding
description:
  uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.


ensembl_gene_id: LIP_3162
symbol: tatC
gene_biotype: protein_coding
description:
  Preprotein translocase subunit TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes.


ensembl_gene_id: LIP_3166
symbol: rex
gene_biotype: protein_coding
description:
  REX family transcriptional regulator; Modulates transcription in response to changes in cellular NADH/NAD(+) redox state.


ensembl_gene_id: LIP_3170
symbol: folD
gene_biotype: protein_coding
description:
  Methenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.


ensembl_gene_id: LIP_3176
symbol: purA
gene_biotype: protein_coding
description:
  Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.


ensembl_gene_id: LIP_3178
symbol: metG
gene_biotype: protein_coding
description:
  methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.


ensembl_gene_id: LIP_3181
symbol: rsmI
gene_biotype: protein_coding
description:
  16S rRNA methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.


ensembl_gene_id: LIP_3183
symbol: tmk
gene_biotype: protein_coding
description:
  Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.


ensembl_gene_id: LIP_3193
symbol: coaX
gene_biotype: protein_coding
description:
  Pantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.


ensembl_gene_id: LIP_3194
symbol: LIP_3194
gene_biotype: protein_coding
description:
  Phosphopantothenoylcysteine decarboxylase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.


ensembl_gene_id: LIP_3200
symbol: recR
gene_biotype: protein_coding
description:
  Recombinase RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.


ensembl_gene_id: LIP_3201
symbol: LIP_3201
gene_biotype: protein_coding
description:
  Nucleoid-associated protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.


ensembl_gene_id: LIP_3202
symbol: dnaX
gene_biotype: protein_coding
description:
  DNA polymerase III subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: LIP_3205
symbol: tadA
gene_biotype: protein_coding
description:
  Cytosine/adenosine deaminases; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: LIP_3227
symbol: LIP_3227
gene_biotype: protein_coding
description:
  Polynucleotide adenylyltransferase; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.


ensembl_gene_id: LIP_3241
symbol: rplM
gene_biotype: protein_coding
description:
  50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.


ensembl_gene_id: LIP_3242
symbol: truA
gene_biotype: protein_coding
description:
  tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.


ensembl_gene_id: LIP_3244
symbol: rpoA
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: LIP_3245
symbol: rpsD
gene_biotype: protein_coding
description:
  30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.


ensembl_gene_id: LIP_3246
symbol: rpsK
gene_biotype: protein_coding
description:
  30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.


ensembl_gene_id: LIP_3247
symbol: rpsM
gene_biotype: protein_coding
description:
  30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.


ensembl_gene_id: LIP_3248
symbol: infA
gene_biotype: protein_coding
description:
  Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.


ensembl_gene_id: LIP_3250
symbol: map
gene_biotype: protein_coding
description:
  Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.


ensembl_gene_id: LIP_3251
symbol: secY
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.


ensembl_gene_id: LIP_3252
symbol: rplO
gene_biotype: protein_coding
description:
  50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.


ensembl_gene_id: LIP_3254
symbol: rpsE
gene_biotype: protein_coding
description:
  30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.


ensembl_gene_id: LIP_3255
symbol: rplR
gene_biotype: protein_coding
description:
  50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.


ensembl_gene_id: LIP_3256
symbol: rplF
gene_biotype: protein_coding
description:
  50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.


ensembl_gene_id: LIP_3257
symbol: rpsH
gene_biotype: protein_coding
description:
  30S ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.


ensembl_gene_id: LIP_3258
symbol: rpsZ
gene_biotype: protein_coding
description:
  30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.


ensembl_gene_id: LIP_3259
symbol: rplE
gene_biotype: protein_coding
description:
  50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.


ensembl_gene_id: LIP_3260
symbol: rplX
gene_biotype: protein_coding
description:
  50S ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.


ensembl_gene_id: LIP_3261
symbol: rplN
gene_biotype: protein_coding
description:
  50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.


ensembl_gene_id: LIP_3262
symbol: rpsQ
gene_biotype: protein_coding
description:
  30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.


ensembl_gene_id: LIP_3264
symbol: rplP
gene_biotype: protein_coding
description:
  50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.


ensembl_gene_id: LIP_3265
symbol: rpsC
gene_biotype: protein_coding
description:
  30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.


ensembl_gene_id: LIP_3266
symbol: rplV
gene_biotype: protein_coding
description:
  50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.


ensembl_gene_id: LIP_3267
symbol: rpsS
gene_biotype: protein_coding
description:
  30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.


ensembl_gene_id: LIP_3268
symbol: rplB
gene_biotype: protein_coding
description:
  50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.


ensembl_gene_id: LIP_3269
symbol: rplW
gene_biotype: protein_coding
description:
  50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.


ensembl_gene_id: LIP_3271
symbol: rplC
gene_biotype: protein_coding
description:
  50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.


ensembl_gene_id: LIP_3272
symbol: rpsJ
gene_biotype: protein_coding
description:
  30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.


ensembl_gene_id: LIP_3273
symbol: tuf
gene_biotype: protein_coding
description:
  Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.


ensembl_gene_id: LIP_3274
symbol: fusA
gene_biotype: protein_coding
description:
  Elongation factor P; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.


ensembl_gene_id: LIP_3275
symbol: rpsG
gene_biotype: protein_coding
description:
  30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.


ensembl_gene_id: LIP_3276
symbol: rpsL
gene_biotype: protein_coding
description:
  30S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.


ensembl_gene_id: LIP_3278
symbol: rpoC
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: LIP_3281
symbol: rplL
gene_biotype: protein_coding
description:
  50S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.


ensembl_gene_id: LIP_3282
symbol: rplJ
gene_biotype: protein_coding
description:
  50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.


ensembl_gene_id: LIP_3283
symbol: rplA
gene_biotype: protein_coding
description:
  50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.


ensembl_gene_id: LIP_3284
symbol: rplK
gene_biotype: protein_coding
description:
  50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.


ensembl_gene_id: LIP_3285
symbol: nusG
gene_biotype: protein_coding
description:
  Transcription termination/antitermination factor NusG; Participates in transcription elongation, termination and antitermination.


ensembl_gene_id: LIP_3286
symbol: secE
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.


ensembl_gene_id: LIP_3299
symbol: LIP_3299
gene_biotype: protein_coding
description:
  5-amino-6-(5-phosphoribosylamino)uracil reductase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.


ensembl_gene_id: LIP_3301
symbol: ribBA
gene_biotype: protein_coding
description:
  3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.


ensembl_gene_id: LIP_3302
symbol: ribH
gene_biotype: protein_coding
description:
  6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.


ensembl_gene_id: LIP_3303
symbol: ispDF
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D- erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C- methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF).


ensembl_gene_id: LIP_3309
symbol: mcsB
gene_biotype: protein_coding
description:
  ATP:guanido phosphotransferase; Catalyzes the specific phosphorylation of arginine residues in proteins.


ensembl_gene_id: LIP_3340
symbol: LIP_3340
gene_biotype: protein_coding
description:
  Peptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family.


ensembl_gene_id: LIP_3354
symbol: sat
gene_biotype: protein_coding
description:
  Sulfate adenylyltransferase; Catalyzes the synthesis of activated sulfate. Belongs to the sulfate adenylyltransferase family.


ensembl_gene_id: LIP_3355
symbol: LIP_3355
gene_biotype: protein_coding
description:
  Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.


ensembl_gene_id: LIP_3389
symbol: proS
gene_biotype: protein_coding
description:
  prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro).


ensembl_gene_id: LIP_3402
symbol: metN
gene_biotype: protein_coding
description:
  Methionine ABC transporter ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.


ensembl_gene_id: LIP_3423
symbol: LIP_3423
gene_biotype: protein_coding
description:
  Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit; Belongs to the RuBisCO large chain family.


ensembl_gene_id: LIP_3430
symbol: rnfB
gene_biotype: protein_coding
description:
  Ferredoxin; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.


ensembl_gene_id: LIP_3431
symbol: rnfA
gene_biotype: protein_coding
description:
  Electron transport complex RsxE subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.


ensembl_gene_id: LIP_3433
symbol: rnfG
gene_biotype: protein_coding
description:
  Electron transporter RnfG; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the RnfG family.


ensembl_gene_id: LIP_3434
symbol: rnfD
gene_biotype: protein_coding
description:
  NADH:ubiquinone oxidoreductase; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family.


ensembl_gene_id: LIP_3435
symbol: rnfC
gene_biotype: protein_coding
description:
  Electron transporter RnfC; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily.


ensembl_gene_id: LIP_3436
symbol: LIP_3436
gene_biotype: protein_coding
description:
  Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.


ensembl_gene_id: LIP_3502
symbol: LIP_3502
gene_biotype: protein_coding
description:
  Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.


ensembl_gene_id: LIP_3509
symbol: cobT
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB).


ensembl_gene_id: LIP_3512
symbol: LIP_3512
gene_biotype: protein_coding
description:
  Iron ABC transporter; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: LIP_3514
symbol: cbiA
gene_biotype: protein_coding
description:
  Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.


ensembl_gene_id: LIP_3516
symbol: cobD
gene_biotype: protein_coding
description:
  Cobalamin biosynthesis protein; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.


ensembl_gene_id: LIP_3517
symbol: cobS
gene_biotype: protein_coding
description:
  Cobalamin 5'-phosphate synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.


ensembl_gene_id: LIP_3520
symbol: cobQ
gene_biotype: protein_coding
description:
  Cobyric acid synthase; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.


ensembl_gene_id: LIP_3528
symbol: selA
gene_biotype: protein_coding
description:
  Selenocysteine synthase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis.


ensembl_gene_id: LIP_3530
symbol: LIP_3530
gene_biotype: protein_coding
description:
  Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.


ensembl_gene_id: LIP_3531
symbol: ftsH
gene_biotype: protein_coding
description:
  Cell division protein FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family.  In the central section; belongs to the AAA ATPase family.


ensembl_gene_id: LIP_3536
symbol: nadE
gene_biotype: protein_coding
description:
  NAD synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source; Belongs to the NAD synthetase family.


ensembl_gene_id: LIP_3592
symbol: LIP_3592
gene_biotype: protein_coding
description:
  Transcriptional regulator; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.


ensembl_gene_id: LIP_3595
symbol: mfd
gene_biotype: protein_coding
description:
  Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.


ensembl_gene_id: LIP_3596
symbol: pth
gene_biotype: protein_coding
description:
  peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.


ensembl_gene_id: LIP_3597
symbol: rplY
gene_biotype: protein_coding
description:
  50S ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.


ensembl_gene_id: LIP_3598
symbol: prs
gene_biotype: protein_coding
description:
  Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.


ensembl_gene_id: LIP_3599
symbol: glmU
gene_biotype: protein_coding
description:
  N-acetylglucosamine-1-phosphate uridyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain.


ensembl_gene_id: LIP_3605
symbol: ispE
gene_biotype: protein_coding
description:
  4-diphosphocytidyl-2C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.


ensembl_gene_id: LIP_3616
symbol: rsmA
gene_biotype: protein_coding
description:
  Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.


ensembl_gene_id: LIP_3623
symbol: aroE
gene_biotype: protein_coding
description:
  Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).


ensembl_gene_id: LIP_3627
symbol: rpsR
gene_biotype: protein_coding
description:
  30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.


ensembl_gene_id: LIP_3636
symbol: gcvPB
gene_biotype: protein_coding
description:
  Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. C-terminal subunit subfamily.


ensembl_gene_id: LIP_3637
symbol: gcvPA
gene_biotype: protein_coding
description:
  Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein.


ensembl_gene_id: LIP_3638
symbol: gcvH
gene_biotype: protein_coding
description:
  Glycine cleavage system protein H; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.


ensembl_gene_id: LIP_3639
symbol: gcvT
gene_biotype: protein_coding
description:
  Glycine cleavage system protein T; The glycine cleavage system catalyzes the degradation of glycine.


ensembl_gene_id: LIP_3640
symbol: sucD
gene_biotype: protein_coding
description:
  succinyl-CoA synthetase subsunit alpha; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.


ensembl_gene_id: LIP_3641
symbol: sucC
gene_biotype: protein_coding
description:
  succinyl-CoA synthetase subunit beta; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.


ensembl_gene_id: LIP_3650
symbol: rsmG
gene_biotype: protein_coding
description:
  16S rRNA methyltransferase; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.


ensembl_gene_id: LIP_3653
symbol: LIP_3653
gene_biotype: protein_coding
description:
  Membrane protein insertion efficiency factor; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.


ensembl_gene_id: LIP_3654
symbol: rnpA
gene_biotype: protein_coding
description:
  Ribonuclease P; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.


# pathwayInfo

id: CL:1011
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1011_Mixed,_incl._One_carbon_pool_by_folate,_and_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors

description:
  Mixed, incl. One carbon pool by folate, and Oxidoreductase activity, acting on the CH-NH2 group of donors


id: CL:1012
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1012_Mixed,_incl._One_carbon_pool_by_folate,_and_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors

description:
  Mixed, incl. One carbon pool by folate, and Oxidoreductase activity, acting on the CH-NH2 group of donors


id: CL:1013
description: Proline metabolic process, and Nitrogen metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1013_Proline_metabolic_process,_and_Nitrogen_metabolism


id: CL:1014
description: Nitrogen metabolism, and Gamma-glutamyltranspeptidase
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1014_Nitrogen_metabolism,_and_Gamma-glutamyltranspeptidase


id: CL:104
description: Mixed, incl. Translation, and Chaperone
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:104_Mixed,_incl._Translation,_and_Chaperone


id: CL:1051
description: Mixed, incl. Ammonia ligase activity, and Nitrogen fixation
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1051_Mixed,_incl._Ammonia_ligase_activity,_and_Nitrogen_fixation


id: CL:106
description: Mixed, incl. Translation, and Chaperone
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:106_Mixed,_incl._Translation,_and_Chaperone


id: CL:1060
description: Mixed, incl. Pentose phosphate pathway, and Galactose metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1060_Mixed,_incl._Pentose_phosphate_pathway,_and_Galactose_metabolism


id: CL:1062
description: Pentose phosphate pathway, and Glycolysis
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1062_Pentose_phosphate_pathway,_and_Glycolysis


id: CL:1063
description: Mixed, incl. Glycolytic process, and Glucose metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1063_Mixed,_incl._Glycolytic_process,_and_Glucose_metabolic_process


id: CL:1064
description: Pentose phosphate pathway, and Streptomycin biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1064_Pentose_phosphate_pathway,_and_Streptomycin_biosynthesis


id: CL:1065
description: Mixed, incl. Pentose shunt, and Sugar-phosphatase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1065_Mixed,_incl._Pentose_shunt,_and_Sugar-phosphatase_activity


id: CL:107
description: Translation, and Nucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:107_Translation,_and_Nucleoside_triphosphate_biosynthetic_process


id: CL:108
description: Translation, and Nucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:108_Translation,_and_Nucleoside_triphosphate_biosynthetic_process


id: CL:1081
description: Streptomycin biosynthesis, and ADP-specific phosphofructokinase/glucokinase
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1081_Streptomycin_biosynthesis,_and_ADP-specific_phosphofructokinase/glucokinase


id: CL:109
description: Translation, and Nucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:109_Translation,_and_Nucleoside_triphosphate_biosynthetic_process


id: CL:1096
description: Glycolysis, and Putative sugar-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1096_Glycolysis,_and_Putative_sugar-binding_domain


id: CL:110
description: Translation, and Nucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:110_Translation,_and_Nucleoside_triphosphate_biosynthetic_process


id: CL:111
description: Mixed, incl. Ribosome, and Nucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:111_Mixed,_incl._Ribosome,_and_Nucleoside_triphosphate_biosynthetic_process


id: CL:1113
description: Amine-lyase activity, and Ribose-phosphate pyrophosphokinase
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1113_Amine-lyase_activity,_and_Ribose-phosphate_pyrophosphokinase


id: CL:112
description: Ribosome, and Nucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:112_Ribosome,_and_Nucleoside_triphosphate_biosynthetic_process


id: CL:1124
description: NADPH regeneration, and Deoxyribonucleotide catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1124_NADPH_regeneration,_and_Deoxyribonucleotide_catabolic_process


id: CL:114
description: Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:114_Ribosome,_and_Translation_regulator_activity


id: CL:1142
description: D-tagatose 6-phosphate metabolic process, and Carbon fixation
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1142_D-tagatose_6-phosphate_metabolic_process,_and_Carbon_fixation


id: CL:1153
description: Mixed, incl. Biosynthesis of amino acids, and Nucleoside monophosphate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1153_Mixed,_incl._Biosynthesis_of_amino_acids,_and_Nucleoside_monophosphate_metabolic_process


id: CL:1154
description: Biosynthesis of amino acids, and Ribonucleoside monophosphate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1154_Biosynthesis_of_amino_acids,_and_Ribonucleoside_monophosphate_metabolic_process


id: CL:1157
description: Aspartate family amino acid metabolic process, and Novobiocin biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1157_Aspartate_family_amino_acid_metabolic_process,_and_Novobiocin_biosynthesis


id: CL:1159
description: Aspartate family amino acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1159_Aspartate_family_amino_acid_metabolic_process


id: CL:116
description: Ribosome, and ATP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:116_Ribosome,_and_ATP_biosynthetic_process


id: CL:1161
description: Threonine biosynthesis, and Selenocompound metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1161_Threonine_biosynthesis,_and_Selenocompound_metabolism


id: CL:119
description: Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:119_Ribosome,_and_Translation_regulator_activity


id: CL:1218
description: Phenylalanine, tyrosine and tryptophan biosynthesis, and Histidine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1218_Phenylalanine,_tyrosine_and_tryptophan_biosynthesis,_and_Histidine_biosynthesis


id: CL:1219
description: Aromatic amino acid family biosynthetic process, and Anthranilate synthase component I-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1219_Aromatic_amino_acid_family_biosynthetic_process,_and_Anthranilate_synthase_component_I-like


id: CL:122
description: Structural constituent of ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:122_Structural_constituent_of_ribosome,_and_Translation_regulator_activity


id: CL:1222
description: Tryptophan biosynthesis, and Anthranilate synthase component I-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1222_Tryptophan_biosynthesis,_and_Anthranilate_synthase_component_I-like


id: CL:125
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:125_Structural_constituent_of_ribosome


id: CL:1268
description: Threonine synthase activity, and Aromatic amino acid beta-eliminating lyase/threonine aldolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1268_Threonine_synthase_activity,_and_Aromatic_amino_acid_beta-eliminating_lyase/threonine_aldolase


id: CL:1280
description: Ribonucleoside monophosphate metabolic process, and Pyrimidine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1280_Ribonucleoside_monophosphate_metabolic_process,_and_Pyrimidine_metabolism


id: CL:1281
description: Ribonucleoside monophosphate metabolic process, and Permease family
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1281_Ribonucleoside_monophosphate_metabolic_process,_and_Permease_family


id: CL:1282
description: Ribonucleoside monophosphate biosynthetic process, and Permease family
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1282_Ribonucleoside_monophosphate_biosynthetic_process,_and_Permease_family


id: CL:1283
description: De novo IMP biosynthetic process, and Permease family
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1283_De_novo_IMP_biosynthetic_process,_and_Permease_family


id: CL:1286
description: De novo IMP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1286_De_novo_IMP_biosynthetic_process


id: CL:129
description: rRNA binding, and Peptide binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:129_rRNA_binding,_and_Peptide_binding


id: CL:131
description: Large ribosomal subunit, and Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:131_Large_ribosomal_subunit,_and_Structural_constituent_of_ribosome


id: CL:1324
description: GMP metabolic process, and Purine ribonucleoside salvage
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1324_GMP_metabolic_process,_and_Purine_ribonucleoside_salvage


id: CL:1344
description: Indigoidine synthase A-like, and Nucleoside catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1344_Indigoidine_synthase_A-like,_and_Nucleoside_catabolic_process


id: CL:1355
description: Mixed, incl. Isoprene biosynthesis, and Riboflavin metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1355_Mixed,_incl._Isoprene_biosynthesis,_and_Riboflavin_metabolic_process


id: CL:1356
description: Mixed, incl. Isoprene biosynthesis, and Riboflavin metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1356_Mixed,_incl._Isoprene_biosynthesis,_and_Riboflavin_metabolic_process


id: CL:1357
description: Isoprene biosynthesis, and Riboflavin metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1357_Isoprene_biosynthesis,_and_Riboflavin_metabolic_process


id: CL:1358
description: Riboflavin metabolic process, and Tetrahydrofolate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1358_Riboflavin_metabolic_process,_and_Tetrahydrofolate_biosynthetic_process


id: CL:1370
description: Tetrahydrofolate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1370_Tetrahydrofolate_biosynthetic_process


id: CL:1396
description: Mixed, incl. Chromosome partition, and CMP kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1396_Mixed,_incl._Chromosome_partition,_and_CMP_kinase_activity


id: CL:1408
description: Alanine metabolic process, and Carbohydrate kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1408_Alanine_metabolic_process,_and_Carbohydrate_kinase


id: CL:1422
description: Mixed, incl. Penicillin and cephalosporin biosynthesis, and tRNA processing
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1422_Mixed,_incl._Penicillin_and_cephalosporin_biosynthesis,_and_tRNA_processing


id: CL:1424
description: Mixed, incl. Radical SAM, alpha/beta horseshoe, and rRNA (guanine) methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1424_Mixed,_incl._Radical_SAM,_alpha/beta_horseshoe,_and_rRNA_(guanine)_methyltransferase_activity


id: CL:1447
description: Mixed, incl. Nicotinate and nicotinamide metabolism, and Suppression of autophagy
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1447_Mixed,_incl._Nicotinate_and_nicotinamide_metabolism,_and_Suppression_of_autophagy


id: CL:1450
description: Nicotinate and nicotinamide metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1450_Nicotinate_and_nicotinamide_metabolism


id: CL:1465
description: Mixed, incl. Regulation of response to stress, and Disulfide bond
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1465_Mixed,_incl._Regulation_of_response_to_stress,_and_Disulfide_bond


id: CL:1474
description: Mixed, incl. Integrase, SAM-like, N-terminal, and ParB/Sulfiredoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1474_Mixed,_incl._Integrase,_SAM-like,_N-terminal,_and_ParB/Sulfiredoxin


id: CL:1475
description: Mixed, incl. ParB/Sulfiredoxin, and AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1475_Mixed,_incl._ParB/Sulfiredoxin,_and_AAA_domain


id: CL:1477
description: ParB/Sulfiredoxin, and Anion-transporting ATPase
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1477_ParB/Sulfiredoxin,_and_Anion-transporting_ATPase


id: CL:1501
description: Integrase, SAM-like, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1501_Integrase,_SAM-like,_N-terminal


id: CL:1511
description: Mixed, incl. Fatty acid metabolic process, and Short-chain dehydrogenase/reductase SDR
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1511_Mixed,_incl._Fatty_acid_metabolic_process,_and_Short-chain_dehydrogenase/reductase_SDR


id: CL:1512
description: Mixed, incl. Fatty acid metabolic process, and Short-chain dehydrogenase/reductase SDR
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1512_Mixed,_incl._Fatty_acid_metabolic_process,_and_Short-chain_dehydrogenase/reductase_SDR


id: CL:1513
description: Mixed, incl. Fatty acid metabolic process, and Short-chain dehydrogenase/reductase SDR
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1513_Mixed,_incl._Fatty_acid_metabolic_process,_and_Short-chain_dehydrogenase/reductase_SDR


id: CL:1515
description: Fatty acid metabolic process, and Short-chain dehydrogenase/reductase SDR
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1515_Fatty_acid_metabolic_process,_and_Short-chain_dehydrogenase/reductase_SDR


id: CL:1517
description: Fatty acid biosynthesis, and KR domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1517_Fatty_acid_biosynthesis,_and_KR_domain


id: CL:1523
description: Fatty acid synthase activity, and Biotin metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1523_Fatty_acid_synthase_activity,_and_Biotin_metabolism


id: CL:1567
description: Cyclic nucleotide-binding domain, and KR domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1567_Cyclic_nucleotide-binding_domain,_and_KR_domain


id: CL:1569
description: Cyclic nucleotide-binding domain, and Short-chain dehydrogenase/reductase, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1569_Cyclic_nucleotide-binding_domain,_and_Short-chain_dehydrogenase/reductase,_conserved_site


id: CL:1572
description: Cyclic nucleotide-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1572_Cyclic_nucleotide-binding_domain


id: CL:1601
description: Fatty acid metabolic process, and Electron transfer flavoprotein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1601_Fatty_acid_metabolic_process,_and_Electron_transfer_flavoprotein_domain


id: CL:1602
description: Fatty acid metabolic process, and Electron transfer flavoprotein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1602_Fatty_acid_metabolic_process,_and_Electron_transfer_flavoprotein_domain


id: CL:1604
description: Mixed, incl. Acyl-CoA dehydrogenase, C-terminal domain, and Electron transfer flavoprotein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1604_Mixed,_incl._Acyl-CoA_dehydrogenase,_C-terminal_domain,_and_Electron_transfer_flavoprotein_domain


id: CL:1605
description: Mixed, incl. Thiolase, and Enoyl-CoA hydratase/isomerase
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1605_Mixed,_incl._Thiolase,_and_Enoyl-CoA_hydratase/isomerase


id: CL:1609
description: Thiolase, C-terminal, and 3-hydroxyacyl-CoA dehydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1609_Thiolase,_C-terminal,_and_3-hydroxyacyl-CoA_dehydrogenase


id: CL:1627
description: Acyl-CoA dehydrogenase, N-terminal domain, and Electron transfer flavoprotein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1627_Acyl-CoA_dehydrogenase,_N-terminal_domain,_and_Electron_transfer_flavoprotein_domain


id: CL:1653
description: Mixed, incl. CoA hydrolase activity, and Acyl-CoA dehydrogenase, middle domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1653_Mixed,_incl._CoA_hydrolase_activity,_and_Acyl-CoA_dehydrogenase,_middle_domain


id: CL:1675
description: Xylene degradation, and AhpD-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1675_Xylene_degradation,_and_AhpD-like


id: CL:1676
description: Dioxin degradation, and Xenobiotic catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1676_Dioxin_degradation,_and_Xenobiotic_catabolic_process


id: CL:1703
description: Ubiquinone and other terpenoid-quinone biosynthesis, and Alpha/beta hydrolase fold-1
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1703_Ubiquinone_and_other_terpenoid-quinone_biosynthesis,_and_Alpha/beta_hydrolase_fold-1


id: CL:1706
description: Ubiquinone and other terpenoid-quinone biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1706_Ubiquinone_and_other_terpenoid-quinone_biosynthesis


id: CL:1730
description: Mixed, incl. Glycerophospholipid metabolism, and Phosphate ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1730_Mixed,_incl._Glycerophospholipid_metabolism,_and_Phosphate_ion_transport


id: CL:1731
description: Glycerophospholipid metabolism, and Carbohydrate kinase, FGGY
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1731_Glycerophospholipid_metabolism,_and_Carbohydrate_kinase,_FGGY


id: CL:1732
description: Glycerophospholipid metabolism, and Carbohydrate kinase, FGGY
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1732_Glycerophospholipid_metabolism,_and_Carbohydrate_kinase,_FGGY


id: CL:1734
description: glycerol-3-phosphate metabolic process, and NAD+ kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1734_glycerol-3-phosphate_metabolic_process,_and_NAD+_kinase_activity


id: CL:175
description: Small ribosomal subunit, and Ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:175_Small_ribosomal_subunit,_and_Ribosome


id: CL:1754
description: CDP-alcohol phosphatidyltransferase, and YutG/PgpA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1754_CDP-alcohol_phosphatidyltransferase,_and_YutG/PgpA_domain


id: CL:1768
description: Phosphate ion transport, and Cell adhesion
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1768_Phosphate_ion_transport,_and_Cell_adhesion


id: CL:1789
description: Mixed, incl. Cellular component assembly, and Porphyrin-containing compound metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1789_Mixed,_incl._Cellular_component_assembly,_and_Porphyrin-containing_compound_metabolic_process


id: CL:1790
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1790_Mixed,_incl._Porphyrin-containing_compound_metabolic_process,_and_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors

description:
  Mixed, incl. Porphyrin-containing compound metabolic process, and Oxidoreductase activity, acting on a sulfur group of donors


id: CL:1791
description: Mixed, incl. Thioredoxin-like superfamily, and Cytochrome complex assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1791_Mixed,_incl._Thioredoxin-like_superfamily,_and_Cytochrome_complex_assembly


id: CL:1792
description: Mixed, incl. Thioredoxin-like superfamily, and Cytochrome complex assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1792_Mixed,_incl._Thioredoxin-like_superfamily,_and_Cytochrome_complex_assembly


id: CL:1794
description: Thioredoxin-like superfamily, and Cellular response to chemical stress
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1794_Thioredoxin-like_superfamily,_and_Cellular_response_to_chemical_stress


id: CL:1795
description: Thioredoxin domain, and Cellular response to chemical stress
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1795_Thioredoxin_domain,_and_Cellular_response_to_chemical_stress


id: CL:1797
description: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1797_Alkyl_hydroperoxide_reductase_subunit_C/_Thiol_specific_antioxidant


id: CL:1811
description: Response to reactive oxygen species, and Thioredoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1811_Response_to_reactive_oxygen_species,_and_Thioredoxin


id: CL:1822
description: Glutaredoxin, and Ribonucleoside-diphosphate reductase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1822_Glutaredoxin,_and_Ribonucleoside-diphosphate_reductase_complex


id: CL:1839
description: Cytochrome complex assembly, and Formate dehydrogenase (NAD+) activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1839_Cytochrome_complex_assembly,_and_Formate_dehydrogenase_(NAD+)_activity


id: CL:1857
description: Mixed, incl. Formate dehydrogenase (NAD+) activity, and CcmE
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1857_Mixed,_incl._Formate_dehydrogenase_(NAD+)_activity,_and_CcmE


id: CL:1874
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1874_Mixed,_incl._Putative_transport_protein_YtvI-like,_and_Cytochrome_C_biogenesis_protein_transmembrane_region

description:
  Mixed, incl. Putative transport protein YtvI-like, and Cytochrome C biogenesis protein transmembrane region


id: CL:1884
description: Mixed, incl. Porphyrin-containing compound metabolic process, and Cysteine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1884_Mixed,_incl._Porphyrin-containing_compound_metabolic_process,_and_Cysteine_metabolic_process


id: CL:1886
description: Mixed, incl. Cysteine metabolic process, and PUA-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1886_Mixed,_incl._Cysteine_metabolic_process,_and_PUA-like_domain


id: CL:1888
description: Mixed, incl. Sulfate assimilation, and Siroheme metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1888_Mixed,_incl._Sulfate_assimilation,_and_Siroheme_metabolic_process


id: CL:1892
description: Sulfate assimilation, and Siroheme metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1892_Sulfate_assimilation,_and_Siroheme_metabolic_process


id: CL:1929
description: Protoporphyrinogen IX metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1929_Protoporphyrinogen_IX_metabolic_process


id: CL:1961
description: Mixed, incl. Iron-sulfur cluster assembly, and Sulfurtransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1961_Mixed,_incl._Iron-sulfur_cluster_assembly,_and_Sulfurtransferase_activity


id: CL:1962
description: Iron-sulfur cluster assembly, and Cysteine desulfurase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1962_Iron-sulfur_cluster_assembly,_and_Cysteine_desulfurase_activity


id: CL:1965
description: [2Fe-2S] cluster assembly, and NifU-like N terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1965_[2Fe-2S]_cluster_assembly,_and_NifU-like_N_terminal_domain


id: CL:1980
description: SUF system FeS cluster assembly, SufBD, and NifU-like N terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1980_SUF_system_FeS_cluster_assembly,_SufBD,_and_NifU-like_N_terminal_domain


id: CL:1993
description: Mixed, incl. RNA capping, and Transcription regulator Rrf2-type, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:1993_Mixed,_incl._RNA_capping,_and_Transcription_regulator_Rrf2-type,_conserved_site


id: CL:2008
description: Mixed, incl. Coenzyme A metabolic process, and Alditol metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2008_Mixed,_incl._Coenzyme_A_metabolic_process,_and_Alditol_metabolic_process


id: CL:201
description: Small ribosomal subunit, and Ribosomal protein S5 domain 2-type fold, subgroup
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:201_Small_ribosomal_subunit,_and_Ribosomal_protein_S5_domain_2-type_fold,_subgroup


id: CL:2010
description: Mixed, incl. Alditol metabolic process, and Alkaline shock protein Asp23
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2010_Mixed,_incl._Alditol_metabolic_process,_and_Alkaline_shock_protein_Asp23


id: CL:2026
description: Coenzyme A metabolic process, and RNA polymerase sigma-70 like
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2026_Coenzyme_A_metabolic_process,_and_RNA_polymerase_sigma-70_like


id: CL:2035
description: Mixed, incl. Helix-hairpin-helix DNA-binding motif, class 1, and S-methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2035_Mixed,_incl._Helix-hairpin-helix_DNA-binding_motif,_class_1,_and_S-methyltransferase_activity


id: CL:2037
description: Mixed, incl. HhH-GPD domain, and S-methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2037_Mixed,_incl._HhH-GPD_domain,_and_S-methyltransferase_activity


id: CL:2051
description: Mixed, incl. DNA mismatch repair MutS family, and Ami_3
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2051_Mixed,_incl._DNA_mismatch_repair_MutS_family,_and_Ami_3


id: CL:2060
description: Mixed, incl. Thiamine metabolism, and OsmC-like protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2060_Mixed,_incl._Thiamine_metabolism,_and_OsmC-like_protein


id: CL:2082
description: Mixed, incl. OsmC-like protein, and FAD binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2082_Mixed,_incl._OsmC-like_protein,_and_FAD_binding_domain


id: CL:2107
description: TAT protein transport complex, and Ami_3
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2107_TAT_protein_transport_complex,_and_Ami_3


id: CL:2133
description: Mixed, incl. Glyoxylate and dicarboxylate metabolism, and Lactate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2133_Mixed,_incl._Glyoxylate_and_dicarboxylate_metabolism,_and_Lactate_metabolic_process


id: CL:2135
description: Mixed, incl. FAD-linked oxidase-like, C-terminal, and Cysteine-rich domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2135_Mixed,_incl._FAD-linked_oxidase-like,_C-terminal,_and_Cysteine-rich_domain


id: CL:2137
description: Glycolate oxidase complex, and Glycolate oxidase, iron-sulphur subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2137_Glycolate_oxidase_complex,_and_Glycolate_oxidase,_iron-sulphur_subunit


id: CL:2139
description: FAD-linked oxidase, C-terminal, and Glycolate oxidase, iron-sulphur subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2139_FAD-linked_oxidase,_C-terminal,_and_Glycolate_oxidase,_iron-sulphur_subunit


id: CL:2175
description: Mixed, incl. Lactate metabolic process, and MutM-like, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2175_Mixed,_incl._Lactate_metabolic_process,_and_MutM-like,_N-terminal


id: CL:2177
description: Lactate metabolic process, and PHP domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2177_Lactate_metabolic_process,_and_PHP_domain


id: CL:218
description: Mixed, incl. Large ribosomal subunit rRNA binding, and Translation regulation
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:218_Mixed,_incl._Large_ribosomal_subunit_rRNA_binding,_and_Translation_regulation


id: CL:2189
description: Mixed, incl. MutM-like, N-terminal, and Transglycosylase SLT domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2189_Mixed,_incl._MutM-like,_N-terminal,_and_Transglycosylase_SLT_domain


id: CL:2203
description: Mixed, incl. Oxidative phosphorylation, and Electron transport chain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2203_Mixed,_incl._Oxidative_phosphorylation,_and_Electron_transport_chain


id: CL:2205
description: Mixed, incl. Electron transport chain, and Peptidase M16, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2205_Mixed,_incl._Electron_transport_chain,_and_Peptidase_M16,_C-terminal


id: CL:2206
description: Electron transport chain, and Peptidase M16, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2206_Electron_transport_chain,_and_Peptidase_M16,_C-terminal


id: CL:2207
description: Mixed, incl. Oxidative phosphorylation, and Peptidase M16, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2207_Mixed,_incl._Oxidative_phosphorylation,_and_Peptidase_M16,_C-terminal


id: CL:2208
description: Oxidative phosphorylation, and Peptidase M16, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2208_Oxidative_phosphorylation,_and_Peptidase_M16,_C-terminal


id: CL:2209
description: Oxidative phosphorylation, and Cytochrome c-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2209_Oxidative_phosphorylation,_and_Cytochrome_c-like_domain


id: CL:2210
description: Oxidative phosphorylation, and Cytochrome c-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2210_Oxidative_phosphorylation,_and_Cytochrome_c-like_domain


id: CL:2211
description: Oxidative phosphorylation, and Cytochrome c-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2211_Oxidative_phosphorylation,_and_Cytochrome_c-like_domain


id: CL:2212
description: Oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2212_Oxidoreductase_activity,_acting_on_NAD(P)H,_quinone_or_similar_compound_as_acceptor


id: CL:2214
description: Oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2214_Oxidoreductase_activity,_acting_on_NAD(P)H,_quinone_or_similar_compound_as_acceptor


id: CL:2216
description: Oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2216_Oxidoreductase_activity,_acting_on_NAD(P)H,_quinone_or_similar_compound_as_acceptor


id: CL:2218
description: NADH dehydrogenase (ubiquinone) activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2218_NADH_dehydrogenase_(ubiquinone)_activity


id: CL:2270
description: Cytochrome-c oxidase activity, and Cytochrome c-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2270_Cytochrome-c_oxidase_activity,_and_Cytochrome_c-like_domain


id: CL:2286
description: Cytochrome c-like domain, and Cytochrome b/b6-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2286_Cytochrome_c-like_domain,_and_Cytochrome_b/b6-like_domain_superfamily


id: CL:2302
description: NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site, and Respiratory chain complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2302_NADH:ubiquinone_oxidoreductase,_75kDa_subunit,_conserved_site,_and_Respiratory_chain_complex


id: CL:231
description: L28p-like, and Zinc-binding ribosomal protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:231_L28p-like,_and_Zinc-binding_ribosomal_protein


id: CL:2315
description: Mixed, incl. Peptidase M16, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2315_Mixed,_incl._Peptidase_M16,_N-terminal


id: CL:2324
description: Mixed, incl. Peptidase M16, C-terminal, and Methyltransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2324_Mixed,_incl._Peptidase_M16,_C-terminal,_and_Methyltransferase_domain


id: CL:2350
description: Antiporter activity, and DNA binding HTH domain, AraC-type
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2350_Antiporter_activity,_and_DNA_binding_HTH_domain,_AraC-type


id: CL:2373
description: Copper chaperone SCO1/SenC, and Copper ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2373_Copper_chaperone_SCO1/SenC,_and_Copper_ion_transport


id: CL:2388
description: Cytochrome complex, and MarR family
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2388_Cytochrome_complex,_and_MarR_family


id: CL:2403
description: Mixed, incl. Cellular respiration, and Prosthetic group metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2403_Mixed,_incl._Cellular_respiration,_and_Prosthetic_group_metabolic_process


id: CL:2404
description: Mixed, incl. Cellular respiration, and Multiheme cytochrome superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2404_Mixed,_incl._Cellular_respiration,_and_Multiheme_cytochrome_superfamily


id: CL:2405
description: Mixed, incl. Cellular respiration, and TorD-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2405_Mixed,_incl._Cellular_respiration,_and_TorD-like_superfamily


id: CL:2406
description: Mixed, incl. Cellular respiration, and TorD-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2406_Mixed,_incl._Cellular_respiration,_and_TorD-like_superfamily


id: CL:2407
description: Mixed, incl. Anaerobic respiration, and TorD-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2407_Mixed,_incl._Anaerobic_respiration,_and_TorD-like_superfamily


id: CL:2408
description: Mixed, incl. Anaerobic respiration, and TorD-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2408_Mixed,_incl._Anaerobic_respiration,_and_TorD-like_superfamily


id: CL:2410
description: Sulfur metabolism, and TorD-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2410_Sulfur_metabolism,_and_TorD-like_superfamily


id: CL:2412
description: Anaerobic electron transport chain, and Dimethylsulphoxide reductase, chain B
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2412_Anaerobic_electron_transport_chain,_and_Dimethylsulphoxide_reductase,_chain_B


id: CL:2439
description: Mixed, incl. Formate dehydrogenase (NAD+) activity, and Phosphoenolpyruvate carboxykinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2439_Mixed,_incl._Formate_dehydrogenase_(NAD+)_activity,_and_Phosphoenolpyruvate_carboxykinase_activity


id: CL:2441
description: Formate dehydrogenase (NAD+) activity, and Ferric iron binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2441_Formate_dehydrogenase_(NAD+)_activity,_and_Ferric_iron_binding


id: CL:2460
description: Mixed, incl. Sulphur transport, and Multiheme cytochrome superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2460_Mixed,_incl._Sulphur_transport,_and_Multiheme_cytochrome_superfamily


id: CL:2479
description: Mixed, incl. DsrEFH-like, and Methylglyoxal catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2479_Mixed,_incl._DsrEFH-like,_and_Methylglyoxal_catabolic_process


id: CL:2481
description: Mixed, incl. DsrEFH-like, and Polysulphide reductase, NrfD
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2481_Mixed,_incl._DsrEFH-like,_and_Polysulphide_reductase,_NrfD


id: CL:2508
description: Mixed, incl. Multiheme cytochrome superfamily, and Antioxidant activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2508_Mixed,_incl._Multiheme_cytochrome_superfamily,_and_Antioxidant_activity


id: CL:2509
description: Mixed, incl. Superoxide dismutase activity, and Rhodanese Homology Domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2509_Mixed,_incl._Superoxide_dismutase_activity,_and_Rhodanese_Homology_Domain


id: CL:2520
description: Multiheme cytochrome superfamily, and TusA-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2520_Multiheme_cytochrome_superfamily,_and_TusA-like_domain


id: CL:253
description: RNA polymerase, and Transcription antitermination
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:253_RNA_polymerase,_and_Transcription_antitermination


id: CL:2532
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2532_Mixed,_incl._Prosthetic_group_metabolic_process,_and_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_NAD_or_NADP_as_acceptor

description:
  Mixed, incl. Prosthetic group metabolic process, and Oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor


id: CL:2534
description: Prosthetic group metabolic process, and PBP domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2534_Prosthetic_group_metabolic_process,_and_PBP_domain


id: CL:2536
description: Prosthetic group metabolic process, and PBP domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2536_Prosthetic_group_metabolic_process,_and_PBP_domain


id: CL:2538
description: Molybdenum cofactor biosynthesis, and Molybdenum cofactor biosynthesis, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2538_Molybdenum_cofactor_biosynthesis,_and_Molybdenum_cofactor_biosynthesis,_conserved_site


id: CL:2575
description: Oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor, and [2Fe-2S]-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2575_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_NAD_or_NADP_as_acceptor,_and_[2Fe-2S]-binding


id: CL:2577
description: Oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor, and [2Fe-2S]-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2577_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_NAD_or_NADP_as_acceptor,_and_[2Fe-2S]-binding


id: CL:2591
description: Oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor, and [2Fe-2S]-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2591_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_NAD_or_NADP_as_acceptor,_and_[2Fe-2S]-binding


id: CL:2603
description: Mixed, incl. Nickel cation binding, and ATPase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2603_Mixed,_incl._Nickel_cation_binding,_and_ATPase_complex


id: CL:2604
description: Mixed, incl. Nickel cation binding, and ATPase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2604_Mixed,_incl._Nickel_cation_binding,_and_ATPase_complex


id: CL:2607
description: Mixed, incl. Nickel, and ATPase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2607_Mixed,_incl._Nickel,_and_ATPase_complex


id: CL:2609
description: ATPase complex, and Nickel cation binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2609_ATPase_complex,_and_Nickel_cation_binding


id: CL:2633
description: Mixed, incl. Nickel-dependent hydrogenase, and Riboflavin synthase-like beta-barrel
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2633_Mixed,_incl._Nickel-dependent_hydrogenase,_and_Riboflavin_synthase-like_beta-barrel


id: CL:2644
description: Mixed, incl. Cupin 2, conserved barrel, and Protein of unknown function DUF1850
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2644_Mixed,_incl._Cupin_2,_conserved_barrel,_and_Protein_of_unknown_function_DUF1850


id: CL:2669
description: Mixed, incl. Translational readthrough, and YjgF/YER057c/UK114 family
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2669_Mixed,_incl._Translational_readthrough,_and_YjgF/YER057c/UK114_family


id: CL:2670
description: Mixed, incl. Translational readthrough, and Selenophosphate synthetase
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2670_Mixed,_incl._Translational_readthrough,_and_Selenophosphate_synthetase


id: CL:2672
description: Translational readthrough, and Selenophosphate synthetase
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2672_Translational_readthrough,_and_Selenophosphate_synthetase


id: CL:2673
description: Selenium, and Elongation factor SelB, winged helix
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2673_Selenium,_and_Elongation_factor_SelB,_winged_helix


id: CL:2684
description: Selenotransferase activity, and Metal-dependent hydrolase, composite domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2684_Selenotransferase_activity,_and_Metal-dependent_hydrolase,_composite_domain_superfamily


id: CL:2700
description: 5-Nucleotidase/apyrase, and Antioxidant activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2700_5-Nucleotidase/apyrase,_and_Antioxidant_activity


id: CL:2710
description: Mixed, incl. RNA helicase activity, and Gluconate transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2710_Mixed,_incl._RNA_helicase_activity,_and_Gluconate_transporter


id: CL:2730
description: Mixed, incl. NTP pyrophosphohydrolase MazG, putative catalytic core, and Antiporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2730_Mixed,_incl._NTP_pyrophosphohydrolase_MazG,_putative_catalytic_core,_and_Antiporter_activity


id: CL:2745
description: Mixed, incl. Polyketide synthase, enoylreductase domain, and Aldo/keto reductase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2745_Mixed,_incl._Polyketide_synthase,_enoylreductase_domain,_and_Aldo/keto_reductase_family


id: CL:2746
description: Mixed, incl. Polyketide synthase, enoylreductase domain, and Aldo/keto reductase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2746_Mixed,_incl._Polyketide_synthase,_enoylreductase_domain,_and_Aldo/keto_reductase_family


id: CL:2747
description: Mixed, incl. Polyketide synthase, enoylreductase domain, and Spermidine synthase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2747_Mixed,_incl._Polyketide_synthase,_enoylreductase_domain,_and_Spermidine_synthase_activity


id: CL:2748
description: Mixed, incl. Polyketide synthase, enoylreductase domain, and Spermidine synthase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2748_Mixed,_incl._Polyketide_synthase,_enoylreductase_domain,_and_Spermidine_synthase_activity


id: CL:2751
description: Naphthalene degradation, and Phosphotransferase enzyme family
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2751_Naphthalene_degradation,_and_Phosphotransferase_enzyme_family


id: CL:2769
description: Mixed, incl. Adenosine to inosine editing, and Acetyltransferase (GNAT) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2769_Mixed,_incl._Adenosine_to_inosine_editing,_and_Acetyltransferase_(GNAT)_domain


id: CL:2781
description: Mixed, incl. Aldo/keto reductase family, and Oligopeptidase F
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2781_Mixed,_incl._Aldo/keto_reductase_family,_and_Oligopeptidase_F


id: CL:2801
description: Mixed, incl. LysE type translocator, and EamA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2801_Mixed,_incl._LysE_type_translocator,_and_EamA_domain


id: CL:2802
description: Mixed, incl. EamA domain, and LysE type translocator
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2802_Mixed,_incl._EamA_domain,_and_LysE_type_translocator


id: CL:2818
description: Mixed, incl. LysE type translocator, and NTF2-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2818_Mixed,_incl._LysE_type_translocator,_and_NTF2-like_domain_superfamily


id: CL:2832
description: Mixed, incl. Acid phosphatase homologues, and Von Willebrand factor (vWF) type A domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2832_Mixed,_incl._Acid_phosphatase_homologues,_and_Von_Willebrand_factor_(vWF)_type_A_domain


id: CL:2834
description: Mixed, incl. Von Willebrand factor (vWF) type A domain, and Class I glutamine amidotransferase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2834_Mixed,_incl._Von_Willebrand_factor_(vWF)_type_A_domain,_and_Class_I_glutamine_amidotransferase-like


id: CL:2849
description: Acid phosphatase homologues, and Transposase, IS4-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2849_Acid_phosphatase_homologues,_and_Transposase,_IS4-like


id: CL:2859
description: Mixed, incl. Signal transduction, and Flagellar assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2859_Mixed,_incl._Signal_transduction,_and_Flagellar_assembly


id: CL:2860
description: Mixed, incl. Signal transduction, and Flagellar assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2860_Mixed,_incl._Signal_transduction,_and_Flagellar_assembly


id: CL:2861
description: Mixed, incl. Flagellar assembly, and Bacterial chemotaxis
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2861_Mixed,_incl._Flagellar_assembly,_and_Bacterial_chemotaxis


id: CL:2863
description: Mixed, incl. Flagellar assembly, and Bacterial chemotaxis
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2863_Mixed,_incl._Flagellar_assembly,_and_Bacterial_chemotaxis


id: CL:2864
description: Flagellar assembly, and Bacterial chemotaxis
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2864_Flagellar_assembly,_and_Bacterial_chemotaxis


id: CL:2865
description: Flagellar assembly, and Bacterial chemotaxis
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2865_Flagellar_assembly,_and_Bacterial_chemotaxis


id: CL:2866
description: Flagellar assembly, and Bacterial chemotaxis
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2866_Flagellar_assembly,_and_Bacterial_chemotaxis


id: CL:2868
description: Flagellar assembly, and Bacterial chemotaxis
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2868_Flagellar_assembly,_and_Bacterial_chemotaxis


id: CL:2877
description: Bacterial flagellum, and Bacterial flagellum protein export
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2877_Bacterial_flagellum,_and_Bacterial_flagellum_protein_export


id: CL:2878
description: Bacterial-type flagellum basal body, rod, and Flagellar hook-basal body protein, FlgE/F/G
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2878_Bacterial-type_flagellum_basal_body,_rod,_and_Flagellar_hook-basal_body_protein,_FlgE/F/G


id: CL:2889
description: Bacterial flagellum protein export, and Bacterial flagellum
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2889_Bacterial_flagellum_protein_export,_and_Bacterial_flagellum


id: CL:2899
description: Cytoskeletal motor activity, and Flagella basal body rod protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2899_Cytoskeletal_motor_activity,_and_Flagella_basal_body_rod_protein


id: CL:2911
description: Bacterial-type flagellum hook, and MotA/TolQ/ExbB proton channel
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2911_Bacterial-type_flagellum_hook,_and_MotA/TolQ/ExbB_proton_channel


id: CL:2930
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2930_Mixed,_incl._ATP_binding_protein_MinD/FleN,_and_Type_III_secretion_system_flagellar_brake_protein_YcgR,_PilZN_domain

description:
  Mixed, incl. ATP binding protein MinD/FleN, and Type III secretion system flagellar brake protein YcgR, PilZN domain


id: CL:2947
description: CheW-like domain, and Protein-glutamine glutaminase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2947_CheW-like_domain,_and_Protein-glutamine_glutaminase_activity


id: CL:2984
description: Protein serine kinase activity, and STAS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:2984_Protein_serine_kinase_activity,_and_STAS_domain


id: CL:3000
description: HD-GYP domain, and GGDEF domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3000_HD-GYP_domain,_and_GGDEF_domain


id: CL:3004
description: GGDEF domain, and HD-GYP domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3004_GGDEF_domain,_and_HD-GYP_domain


id: CL:302
description: Mixed, incl. Translation initiation factor IF-2, N-terminal, and tRNA pseudouridine synthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:302_Mixed,_incl._Translation_initiation_factor_IF-2,_N-terminal,_and_tRNA_pseudouridine_synthesis


id: CL:3022
description: Mixed, incl. Horizontal gene transfer, and DNA replication initiation
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3022_Mixed,_incl._Horizontal_gene_transfer,_and_DNA_replication_initiation


id: CL:3048
description: Phosphorelay signal transduction system, and Succinylglutamate desuccinylase/aspartoacylase
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3048_Phosphorelay_signal_transduction_system,_and_Succinylglutamate_desuccinylase/aspartoacylase


id: CL:3049
description: Phosphorelay signal transduction system, and PdxA family
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3049_Phosphorelay_signal_transduction_system,_and_PdxA_family


id: CL:3050
description: Phosphorelay signal transduction system
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3050_Phosphorelay_signal_transduction_system


id: CL:3051
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3051_Two-component_regulatory_system,_and_Signal_transduction_histidine_kinase-related_protein,_C-terminal

description:
  Two-component regulatory system, and Signal transduction histidine kinase-related protein, C-terminal


id: CL:3052
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3052_Two-component_regulatory_system,_and_Motif_C-terminal_to_PAS_motifs_(likely_to_contribute_to_PAS_structural_domain)

description:
  Two-component regulatory system, and Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)


id: CL:3054
description: Two-component regulatory system
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3054_Two-component_regulatory_system


id: CL:3056
description: His Kinase A (phosphoacceptor) domain, and OmpR/PhoB-type DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3056_His_Kinase_A_(phosphoacceptor)_domain,_and_OmpR/PhoB-type_DNA-binding_domain


id: CL:3059
description: His Kinase A (phosphoacceptor) domain, and OmpR/PhoB-type DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3059_His_Kinase_A_(phosphoacceptor)_domain,_and_OmpR/PhoB-type_DNA-binding_domain


id: CL:3090
description: Mixed, incl. PAS fold, and Tetrapyrrole methylase
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3090_Mixed,_incl._PAS_fold,_and_Tetrapyrrole_methylase


id: CL:3101
description: Histidine kinase, and LytTR DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3101_Histidine_kinase,_and_LytTR_DNA-binding_domain


id: CL:3111
description: Helix_turn_helix, Lux Regulon, and Histidine kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3111_Helix_turn_helix,_Lux_Regulon,_and_Histidine_kinase


id: CL:3113
description: Helix_turn_helix, Lux Regulon, and Histidine kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3113_Helix_turn_helix,_Lux_Regulon,_and_Histidine_kinase


id: CL:3116
description: Helix_turn_helix, Lux Regulon, and Histidine kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3116_Helix_turn_helix,_Lux_Regulon,_and_Histidine_kinase


id: CL:3119
description: Histidine kinase, and Helix_turn_helix, Lux Regulon
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3119_Histidine_kinase,_and_Helix_turn_helix,_Lux_Regulon


id: CL:3136
description: Helix_turn_helix, Lux Regulon, and Histidine kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3136_Helix_turn_helix,_Lux_Regulon,_and_Histidine_kinase


id: CL:3168
description: ApbE family, and Two-component regulatory system
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3168_ApbE_family,_and_Two-component_regulatory_system


id: CL:3184
description: Mixed, incl. Succinylglutamate desuccinylase/aspartoacylase, and Capsule organization
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3184_Mixed,_incl._Succinylglutamate_desuccinylase/aspartoacylase,_and_Capsule_organization


id: CL:3187
description: Mixed, incl. Capsule organization, and Tetrahydrofolylpolyglutamate synthase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3187_Mixed,_incl._Capsule_organization,_and_Tetrahydrofolylpolyglutamate_synthase_activity


id: CL:3210
description: Mixed, incl. Response to virus, and Amidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3210_Mixed,_incl._Response_to_virus,_and_Amidase_activity


id: CL:3235
description: Mixed, incl. CRISPR-associated Cas3-type HD domain, and Domain of unknown function DUF4277
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3235_Mixed,_incl._CRISPR-associated_Cas3-type_HD_domain,_and_Domain_of_unknown_function_DUF4277


id: CL:3253
description: Mixed, incl. Cell differentiation, and LysM domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3253_Mixed,_incl._Cell_differentiation,_and_LysM_domain


id: CL:3254
description: Mixed, incl. Cell differentiation, and LysM domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3254_Mixed,_incl._Cell_differentiation,_and_LysM_domain


id: CL:3255
description: Mixed, incl. Cell differentiation, and LysM domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3255_Mixed,_incl._Cell_differentiation,_and_LysM_domain


id: CL:3256
description: Mixed, incl. Cell differentiation, and Lysin motif
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3256_Mixed,_incl._Cell_differentiation,_and_Lysin_motif


id: CL:3257
description: Mixed, incl. Cell differentiation, and Lysin motif
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3257_Mixed,_incl._Cell_differentiation,_and_Lysin_motif


id: CL:3258
description: Mixed, incl. Cell differentiation, and Lysin motif
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3258_Mixed,_incl._Cell_differentiation,_and_Lysin_motif


id: CL:3259
description: Mixed, incl. Cell differentiation, and Transcription, DNA-templated
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3259_Mixed,_incl._Cell_differentiation,_and_Transcription,_DNA-templated


id: CL:3260
description: Mixed, incl. Cell differentiation, and Transcription, DNA-templated
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3260_Mixed,_incl._Cell_differentiation,_and_Transcription,_DNA-templated


id: CL:3261
description: Cell differentiation, and Nucleoside triphosphate catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3261_Cell_differentiation,_and_Nucleoside_triphosphate_catabolic_process


id: CL:3287
description: Mixed, incl. Activator, and SpoIVB peptidase S55
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3287_Mixed,_incl._Activator,_and_SpoIVB_peptidase_S55


id: CL:3304
description: Mixed, incl. Asexual sporulation, and Protein serine/threonine phosphatase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3304_Mixed,_incl._Asexual_sporulation,_and_Protein_serine/threonine_phosphatase_activity


id: CL:3319
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3319_Stage_III_sporulation_protein_AC/AD_family,_and_Stage_III_sporulation_protein_AA,_AAA+_ATPase_domain

description:
  Stage III sporulation protein AC/AD family, and Stage III sporulation protein AA, AAA+ ATPase domain


id: CL:3338
description: Spore germination, and Sporulation
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3338_Spore_germination,_and_Sporulation


id: CL:3340
description: Spore germination, and Sporulation
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3340_Spore_germination,_and_Sporulation


id: CL:3342
description: Spore germination, and Sporulation
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3342_Spore_germination,_and_Sporulation


id: CL:3376
description: Intracellular immature spore, and DNA condensation
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3376_Intracellular_immature_spore,_and_DNA_condensation


id: CL:3391
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3391_Mostly_uncharacterized,_incl._Small_acid-soluble_spore_protein,_alpha/beta-type,_conserved_site,_and_Metallopeptidase_activity

description:
  Mostly uncharacterized, incl. Small acid-soluble spore protein, alpha/beta-type, conserved site, and Metallopeptidase activity


id: CL:3393
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3393_Mixed,_incl._Small_acid-soluble_spore_protein,_alpha/beta-type,_conserved_site,_and_Protein_of_unknown_function_DUF1614

description:
  Mixed, incl. Small acid-soluble spore protein, alpha/beta-type, conserved site, and Protein of unknown function DUF1614


id: CL:3395
description: Mixed, incl. Protein of unknown function DUF1614, and Sporulation stage II, protein P
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3395_Mixed,_incl._Protein_of_unknown_function_DUF1614,_and_Sporulation_stage_II,_protein_P


id: CL:3425
description: Mixed, incl. Nucleoside triphosphate catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3425_Mixed,_incl._Nucleoside_triphosphate_catabolic_process


id: CL:3440
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3440_Mostly_uncharacterized,_incl._DNA-templated_transcription,_termination,_and_Tetracycline_resistance_protein_TetA/multidrug_resistance_protein_MdtG

description:
  Mostly uncharacterized, incl. DNA-templated transcription, termination, and Tetracycline resistance protein TetA/multidrug resistance protein MdtG


id: CL:3442
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3442_Mixed,_incl._Tetracycline_resistance_protein_TetA/multidrug_resistance_protein_MdtG,_and_Integral_component_of_plasma_membrane

description:
  Mixed, incl. Tetracycline resistance protein TetA/multidrug resistance protein MdtG, and Integral component of plasma membrane


id: CL:3459
description: DNA-templated transcription, termination, and Immunoglobulin-like fold
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3459_DNA-templated_transcription,_termination,_and_Immunoglobulin-like_fold


id: CL:347
description: Aminoacyl-tRNA synthetase, class I, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:347_Aminoacyl-tRNA_synthetase,_class_I,_conserved_site


id: CL:3471
description: Mixed, incl. Lon protease, and Lyase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3471_Mixed,_incl._Lon_protease,_and_Lyase_activity


id: CL:3481
description: Lysin motif, and S-layer homology domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3481_Lysin_motif,_and_S-layer_homology_domain


id: CL:3499
description: Mixed, incl. NodB homology domain, and Chitin binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3499_Mixed,_incl._NodB_homology_domain,_and_Chitin_binding


id: CL:3501
description: Mixed, incl. Metal ion homeostasis, and AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3501_Mixed,_incl._Metal_ion_homeostasis,_and_AAA_domain


id: CL:3504
description: Mixed, incl. Glycosyl transferase family 4, and Glutathione metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3504_Mixed,_incl._Glycosyl_transferase_family_4,_and_Glutathione_metabolic_process


id: CL:3527
description: NodB homology domain, and Chitin binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3527_NodB_homology_domain,_and_Chitin_binding


id: CL:3536
description: Mixed, incl. Sulfite exporter TauE/SafE, and G5 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3536_Mixed,_incl._Sulfite_exporter_TauE/SafE,_and_G5_domain


id: CL:3537
description: Mixed, incl. G5 domain, and Nucleoside-triphosphate diphosphatase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3537_Mixed,_incl._G5_domain,_and_Nucleoside-triphosphate_diphosphatase_activity


id: CL:3553
description: Sulfite exporter TauE/SafE, and Metal-sensitive transcriptional repressor
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3553_Sulfite_exporter_TauE/SafE,_and_Metal-sensitive_transcriptional_repressor


id: CL:3566
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3566_Mixed,_incl._Chitinase_insertion_domain_superfamily,_and_Peptidase_S1,_PA_clan,_chymotrypsin-like_fold

description:
  Mixed, incl. Chitinase insertion domain superfamily, and Peptidase S1, PA clan, chymotrypsin-like fold


id: CL:3586
description: Mixed, incl. RNA polymerase sigma-H factor, and Response to metal ion
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3586_Mixed,_incl._RNA_polymerase_sigma-H_factor,_and_Response_to_metal_ion


id: CL:3588
description: Mixed, incl. RNA polymerase sigma-H factor, and Polysaccharide biosynthesis protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3588_Mixed,_incl._RNA_polymerase_sigma-H_factor,_and_Polysaccharide_biosynthesis_protein


id: CL:3600
description: Mixed, incl. Response to metal ion, and Large family of predicted nucleotide-binding domains
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3600_Mixed,_incl._Response_to_metal_ion,_and_Large_family_of_predicted_nucleotide-binding_domains


id: CL:3613
description: Mixed, incl. Spore coat protein CotS, and Outer spore coat protein E (CotE)
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3613_Mixed,_incl._Spore_coat_protein_CotS,_and_Outer_spore_coat_protein_E_(CotE)


id: CL:3614
description: Mixed, incl. Spore coat protein CotS, and Outer spore coat protein E (CotE)
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3614_Mixed,_incl._Spore_coat_protein_CotS,_and_Outer_spore_coat_protein_E_(CotE)


id: CL:3627
description: Mixed, incl. Metallopeptidase, catalytic domain superfamily, and Tail specific protease
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3627_Mixed,_incl._Metallopeptidase,_catalytic_domain_superfamily,_and_Tail_specific_protease


id: CL:3639
description: Mixed, incl. Peptidase M48, and Tetratricopeptide TPR-4
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3639_Mixed,_incl._Peptidase_M48,_and_Tetratricopeptide_TPR-4


id: CL:3640
description: Mixed, incl. Peptidase M48, and Tetratricopeptide TPR-4
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3640_Mixed,_incl._Peptidase_M48,_and_Tetratricopeptide_TPR-4


id: CL:3649
description: Mixed, incl. Peptidyl-serine acetylation, and Spore germination
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3649_Mixed,_incl._Peptidyl-serine_acetylation,_and_Spore_germination


id: CL:3660
description: Mixed, incl. Haloacid dehalogenase-like hydrolase, and Enoyl-(Acyl carrier protein) reductase
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3660_Mixed,_incl._Haloacid_dehalogenase-like_hydrolase,_and_Enoyl-(Acyl_carrier_protein)_reductase


id: CL:3661
description: Haloacid dehalogenase-like hydrolase, and Enoyl-(Acyl carrier protein) reductase
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3661_Haloacid_dehalogenase-like_hydrolase,_and_Enoyl-(Acyl_carrier_protein)_reductase


id: CL:3670
description: Mixed, incl. Amidohydrolase, and SASP, alpha/beta-type superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3670_Mixed,_incl._Amidohydrolase,_and_SASP,_alpha/beta-type_superfamily


id: CL:368
description: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:368_glutaminyl-tRNA_synthase_(glutamine-hydrolyzing)_activity


id: CL:3683
description: Mostly uncharacterized, incl. MmgE/PrpD, and Isocitrate lyase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3683_Mostly_uncharacterized,_incl._MmgE/PrpD,_and_Isocitrate_lyase_family


id: CL:3684
description: Mixed, incl. MmgE/PrpD, and Isocitrate lyase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3684_Mixed,_incl._MmgE/PrpD,_and_Isocitrate_lyase_family


id: CL:3686
description: Mixed, incl. Nucleoside recognition, and Negative regulation of sporulation
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3686_Mixed,_incl._Nucleoside_recognition,_and_Negative_regulation_of_sporulation


id: CL:3711
description: Mixed, incl. Terpene catabolic process, and TTHA0068-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3711_Mixed,_incl._Terpene_catabolic_process,_and_TTHA0068-like_superfamily


id: CL:3729
description: Mixed, incl. Cation transport, and Cupredoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3729_Mixed,_incl._Cation_transport,_and_Cupredoxin


id: CL:3730
description: Mixed, incl. Cation transport, and Cupredoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3730_Mixed,_incl._Cation_transport,_and_Cupredoxin


id: CL:3731
description: Mixed, incl. Cation transport, and HTH ArsR-type DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3731_Mixed,_incl._Cation_transport,_and_HTH_ArsR-type_DNA-binding_domain


id: CL:3732
description: Mixed, incl. Ferric-uptake regulator, and Transition metal ion homeostasis
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3732_Mixed,_incl._Ferric-uptake_regulator,_and_Transition_metal_ion_homeostasis


id: CL:3733
description: Mixed, incl. Ferric-uptake regulator, and Lipoprotein metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3733_Mixed,_incl._Ferric-uptake_regulator,_and_Lipoprotein_metabolic_process


id: CL:3734
description: Mixed, incl. Ferric-uptake regulator, and Cell adhesion
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3734_Mixed,_incl._Ferric-uptake_regulator,_and_Cell_adhesion


id: CL:3736
description: Mixed, incl. Cell adhesion, and ABC transporter, BtuC-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3736_Mixed,_incl._Cell_adhesion,_and_ABC_transporter,_BtuC-like


id: CL:3754
description: Ferric-uptake regulator, and Lipoprotein metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3754_Ferric-uptake_regulator,_and_Lipoprotein_metabolic_process


id: CL:3767
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3767_Mixed,_incl._Ferrous_iron_transmembrane_transporter_activity,_and_Ferrous_iron_transporter_FeoA_domain

description:
  Mixed, incl. Ferrous iron transmembrane transporter activity, and Ferrous iron transporter FeoA domain


id: CL:3768
description: Ferrous iron transmembrane transporter activity, and Ferrous iron transporter FeoA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3768_Ferrous_iron_transmembrane_transporter_activity,_and_Ferrous_iron_transporter_FeoA_domain


id: CL:377
description: Mixed, incl. Ribosome binding, and RF-1 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:377_Mixed,_incl._Ribosome_binding,_and_RF-1_domain


id: CL:3777
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3777_Mixed,_incl._HTH-type_transcriptional_repressor_KstR2,_C-terminal,_and_Nitrogen_regulatory_protein_PII/ATP_phosphoribosyltransferase,_C-terminal

description:
  Mixed, incl. HTH-type transcriptional repressor KstR2, C-terminal, and Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal


id: CL:3794
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3794_Mixed,_incl._ATPase-coupled_cation_transmembrane_transporter_activity,_and_HTH_ArsR-type_DNA-binding_domain

description:
  Mixed, incl. ATPase-coupled cation transmembrane transporter activity, and HTH ArsR-type DNA-binding domain


id: CL:3796
description: Mixed, incl. Heavy-metal-associated domain, and Cupredoxin-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3796_Mixed,_incl._Heavy-metal-associated_domain,_and_Cupredoxin-like_domain


id: CL:3799
description: P-type ATPase, subfamily IB, and Cupredoxin-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3799_P-type_ATPase,_subfamily_IB,_and_Cupredoxin-like_domain


id: CL:3826
description: Mixed, incl. HTH ArsR-type DNA-binding domain, and Thioredoxin domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3826_Mixed,_incl._HTH_ArsR-type_DNA-binding_domain,_and_Thioredoxin_domain


id: CL:3828
description: HTH ArsR-type DNA-binding domain, and Serine aminopeptidase, S33
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3828_HTH_ArsR-type_DNA-binding_domain,_and_Serine_aminopeptidase,_S33


id: CL:3854
description: Mixed, incl. Cupredoxin, and Zinc/iron permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3854_Mixed,_incl._Cupredoxin,_and_Zinc/iron_permease


id: CL:3855
description: Mixed, incl. Cupredoxin, and Zinc/iron permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3855_Mixed,_incl._Cupredoxin,_and_Zinc/iron_permease


id: CL:3857
description: Mixed, incl. Multicopper oxidase, and Blue (type 1) copper domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3857_Mixed,_incl._Multicopper_oxidase,_and_Blue_(type_1)_copper_domain


id: CL:3858
description: Multicopper oxidase, and Blue (type 1) copper domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3858_Multicopper_oxidase,_and_Blue_(type_1)_copper_domain


id: CL:3869
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3869_Mixed,_incl._ABC-2_family_transporter_protein,_and_Nucleotidyl_transferase_AbiEii_toxin,_Type_IV_TA_system

description:
  Mixed, incl. ABC-2 family transporter protein, and Nucleotidyl transferase AbiEii toxin, Type IV TA system


id: CL:3884
description: Mixed, incl. MIP18 family-like, and Cytochrome c oxidase-like, subunit I superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3884_Mixed,_incl._MIP18_family-like,_and_Cytochrome_c_oxidase-like,_subunit_I_superfamily


id: CL:3899
description: Mixed, incl. Manganese ion homeostasis, and ATPase, BadF/BadG/BcrA/BcrD type
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3899_Mixed,_incl._Manganese_ion_homeostasis,_and_ATPase,_BadF/BadG/BcrA/BcrD_type


id: CL:3911
description: Mostly uncharacterized, incl. YHS domain, and Response to metal ion
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3911_Mostly_uncharacterized,_incl._YHS_domain,_and_Response_to_metal_ion


id: CL:3912
description: Mixed, incl. Response to metal ion, and Zinc/iron permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3912_Mixed,_incl._Response_to_metal_ion,_and_Zinc/iron_permease


id: CL:3923
description: Mixed, incl. YHS domain, and Helix-turn-helix domain of transposase family ISL3
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3923_Mixed,_incl._YHS_domain,_and_Helix-turn-helix_domain_of_transposase_family_ISL3


id: CL:3935
description: Mixed, incl. Polysaccharide metabolic process, and O-Antigen nucleotide sugar biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3935_Mixed,_incl._Polysaccharide_metabolic_process,_and_O-Antigen_nucleotide_sugar_biosynthesis


id: CL:3936
description: Mixed, incl. Polysaccharide biosynthetic process, and Glycosyl transferases group 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3936_Mixed,_incl._Polysaccharide_biosynthetic_process,_and_Glycosyl_transferases_group_1


id: CL:3939
description: Mixed, incl. Polysaccharide biosynthetic process, and O-Antigen nucleotide sugar biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3939_Mixed,_incl._Polysaccharide_biosynthetic_process,_and_O-Antigen_nucleotide_sugar_biosynthesis


id: CL:394
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:394_Mixed,_incl._De_novo_CTP_biosynthetic_process,_and_Peptidase_M50,_putative_membrane-associated_zinc_metallopeptidase

description:
  Mixed, incl. De novo CTP biosynthetic process, and Peptidase M50, putative membrane-associated zinc metallopeptidase


id: CL:3940
description: Polysaccharide biosynthetic process, and O-Antigen nucleotide sugar biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3940_Polysaccharide_biosynthetic_process,_and_O-Antigen_nucleotide_sugar_biosynthesis


id: CL:3941
description: Polysaccharide biosynthetic process, and O-Antigen nucleotide sugar biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3941_Polysaccharide_biosynthetic_process,_and_O-Antigen_nucleotide_sugar_biosynthesis


id: CL:3944
description: O-Antigen nucleotide sugar biosynthesis, and Polysaccharide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3944_O-Antigen_nucleotide_sugar_biosynthesis,_and_Polysaccharide_biosynthetic_process


id: CL:3945
description: O-Antigen nucleotide sugar biosynthesis, and Polysaccharide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3945_O-Antigen_nucleotide_sugar_biosynthesis,_and_Polysaccharide_biosynthetic_process


id: CL:3947
description: Polyketide sugar unit biosynthesis, and Glycosyltransferase 2-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3947_Polyketide_sugar_unit_biosynthesis,_and_Glycosyltransferase_2-like


id: CL:3950
description: Polyketide sugar unit biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3950_Polyketide_sugar_unit_biosynthesis


id: CL:3973
description: O-Antigen nucleotide sugar biosynthesis, and Polysaccharide biosynthesis protein, CapD-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3973_O-Antigen_nucleotide_sugar_biosynthesis,_and_Polysaccharide_biosynthesis_protein,_CapD-like_domain


id: CL:3975
description: NADP+ binding, and GDP-L-fucose synthase/GDP-L-colitose synthase
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3975_NADP+_binding,_and_GDP-L-fucose_synthase/GDP-L-colitose_synthase


id: CL:3994
description: Mixed, incl. UDP-N-acetylglucosamine 2-epimerase, and NeuB family
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:3994_Mixed,_incl._UDP-N-acetylglucosamine_2-epimerase,_and_NeuB_family


id: CL:4011
description: Protein tyrosine kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4011_Protein_tyrosine_kinase_activity


id: CL:4036
description: Mixed, incl. HD-associated domain, and Polysaccharide biosynthesis protein, CapD-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4036_Mixed,_incl._HD-associated_domain,_and_Polysaccharide_biosynthesis_protein,_CapD-like_domain


id: CL:4048
description: Mixed, incl. Mannoside phosphorylase, and Six-hairpin glycosidase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4048_Mixed,_incl._Mannoside_phosphorylase,_and_Six-hairpin_glycosidase_superfamily


id: CL:405
description: Mixed, incl. SpoU rRNA Methylase family, and NAD biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:405_Mixed,_incl._SpoU_rRNA_Methylase_family,_and_NAD_biosynthetic_process


id: CL:4050
description: Mannoside phosphorylase, and Six-hairpin glycosidase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4050_Mannoside_phosphorylase,_and_Six-hairpin_glycosidase_superfamily


id: CL:4067
description: Mixed, incl. Galactose metabolic process, and Glycosidase
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4067_Mixed,_incl._Galactose_metabolic_process,_and_Glycosidase


id: CL:4068
description: Mixed, incl. Galactose metabolic process, and Glycosidase
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4068_Mixed,_incl._Galactose_metabolic_process,_and_Glycosidase


id: CL:4069
description: Galactose metabolic process, and Transcriptional regulator LacI/GalR-like, sensor domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4069_Galactose_metabolic_process,_and_Transcriptional_regulator_LacI/GalR-like,_sensor_domain


id: CL:407
description: GTP binding domain, and Ribosome assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:407_GTP_binding_domain,_and_Ribosome_assembly


id: CL:4087
description: Transcriptional regulator LacI/GalR-like, sensor domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4087_Transcriptional_regulator_LacI/GalR-like,_sensor_domain


id: CL:4097
description: Glycosidase, and Tetracycline resistance protein TetA/multidrug resistance protein MdtG
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4097_Glycosidase,_and_Tetracycline_resistance_protein_TetA/multidrug_resistance_protein_MdtG


id: CL:4099
description: Glycosyl hydrolase family 1, and Glucan catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4099_Glycosyl_hydrolase_family_1,_and_Glucan_catabolic_process


id: CL:4124
description: Mixed, incl. CBS domain, and Methyltransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4124_Mixed,_incl._CBS_domain,_and_Methyltransferase_domain


id: CL:4147
description: Mixed, incl. Macromolecule localization, and Liposaccharide metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4147_Mixed,_incl._Macromolecule_localization,_and_Liposaccharide_metabolic_process


id: CL:4149
description: Mixed, incl. Liposaccharide metabolic process, and Cell outer membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4149_Mixed,_incl._Liposaccharide_metabolic_process,_and_Cell_outer_membrane


id: CL:4150
description: Mixed, incl. Liposaccharide metabolic process, and Macromolecule localization
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4150_Mixed,_incl._Liposaccharide_metabolic_process,_and_Macromolecule_localization


id: CL:4152
description: Mixed, incl. Liposaccharide metabolic process, and Membrane organization
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4152_Mixed,_incl._Liposaccharide_metabolic_process,_and_Membrane_organization


id: CL:4153
description: Mixed, incl. Lipid A metabolic process, and Membrane organization
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4153_Mixed,_incl._Lipid_A_metabolic_process,_and_Membrane_organization


id: CL:4156
description: Mixed, incl. Lipid A metabolic process, and S-layer homology domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4156_Mixed,_incl._Lipid_A_metabolic_process,_and_S-layer_homology_domain


id: CL:4157
description: Mixed, incl. Lipid A metabolic process, and Protein insertion into membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4157_Mixed,_incl._Lipid_A_metabolic_process,_and_Protein_insertion_into_membrane


id: CL:4159
description: Mixed, incl. Lipopolysaccharide biosynthesis, and Glycosyltransferase like family 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4159_Mixed,_incl._Lipopolysaccharide_biosynthesis,_and_Glycosyltransferase_like_family_2


id: CL:4162
description: Lipopolysaccharide biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4162_Lipopolysaccharide_biosynthesis


id: CL:417
description: NAD biosynthetic process, and Peptidyl-glutamine methylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:417_NAD_biosynthetic_process,_and_Peptidyl-glutamine_methylation


id: CL:4196
description: Mixed, incl. MotA/TolQ/ExbB proton channel, and S-layer homology domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4196_Mixed,_incl._MotA/TolQ/ExbB_proton_channel,_and_S-layer_homology_domain


id: CL:4215
description: Lipopolysaccharide biosynthesis, and Cytidylyltransferase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4215_Lipopolysaccharide_biosynthesis,_and_Cytidylyltransferase-like


id: CL:4232
description: Mixed, incl. Secretin and TonB N terminus short domain, and Chaperone-mediated protein folding
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4232_Mixed,_incl._Secretin_and_TonB_N_terminus_short_domain,_and_Chaperone-mediated_protein_folding


id: CL:4244
description: Mixed, incl. Secretin and TonB N terminus short domain, and OmpR/PhoB-type DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4244_Mixed,_incl._Secretin_and_TonB_N_terminus_short_domain,_and_OmpR/PhoB-type_DNA-binding_domain


id: CL:426
description: Mixed, incl. Chaperone, and Clp protease proteolytic subunit /Translocation-enhancing protein TepA
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:426_Mixed,_incl._Chaperone,_and_Clp_protease_proteolytic_subunit_/Translocation-enhancing_protein_TepA


id: CL:4262
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4262_Mixed,_incl._MacB-like_periplasmic_core_domain,_and_Putative_outer_membrane_lipoprotein-sorting_protein

description:
  Mixed, incl. MacB-like periplasmic core domain, and Putative outer membrane lipoprotein-sorting protein


id: CL:4264
description: Mixed, incl. Putative outer membrane lipoprotein-sorting protein, and MMPL family
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4264_Mixed,_incl._Putative_outer_membrane_lipoprotein-sorting_protein,_and_MMPL_family


id: CL:4265
description: Mixed, incl. Putative outer membrane lipoprotein-sorting protein, and MMPL family
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4265_Mixed,_incl._Putative_outer_membrane_lipoprotein-sorting_protein,_and_MMPL_family


id: CL:4267
description: FtsX-like permease family, and ABC transporter, lipoprotein release, LolD-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4267_FtsX-like_permease_family,_and_ABC_transporter,_lipoprotein_release,_LolD-like


id: CL:4277
description: MMPL family, and Outer membrane lipoprotein-sorting protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4277_MMPL_family,_and_Outer_membrane_lipoprotein-sorting_protein


id: CL:4286
description: Mixed, incl. MMPL family, and Lipoprotein transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4286_Mixed,_incl._MMPL_family,_and_Lipoprotein_transport


id: CL:4298
description: Mixed, incl. MacB-like periplasmic core domain, and Biotin-lipoyl like
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4298_Mixed,_incl._MacB-like_periplasmic_core_domain,_and_Biotin-lipoyl_like


id: CL:4300
description: MacB-like periplasmic core domain, and Outer membrane efflux protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4300_MacB-like_periplasmic_core_domain,_and_Outer_membrane_efflux_protein


id: CL:4301
description: Outer membrane efflux protein, and RND efflux pump, membrane fusion protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4301_Outer_membrane_efflux_protein,_and_RND_efflux_pump,_membrane_fusion_protein


id: CL:4310
description: MacB-like periplasmic core domain, and RND efflux pump, membrane fusion protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4310_MacB-like_periplasmic_core_domain,_and_RND_efflux_pump,_membrane_fusion_protein


id: CL:4336
description: Mixed, incl. Immunoglobulin-like fold, and YD repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4336_Mixed,_incl._Immunoglobulin-like_fold,_and_YD_repeat


id: CL:4338
description: Mixed, incl. Immunoglobulin-like fold, and YD repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4338_Mixed,_incl._Immunoglobulin-like_fold,_and_YD_repeat


id: CL:4339
description: Mixed, incl. Immunoglobulin-like fold, and YD repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4339_Mixed,_incl._Immunoglobulin-like_fold,_and_YD_repeat


id: CL:4340
description: Mixed, incl. YD repeat, and Subtilase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4340_Mixed,_incl._YD_repeat,_and_Subtilase_family


id: CL:4342
description: Mixed, incl. YD repeat, and Subtilase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4342_Mixed,_incl._YD_repeat,_and_Subtilase_family


id: CL:4343
description: Mixed, incl. YD repeat, and Subtilase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4343_Mixed,_incl._YD_repeat,_and_Subtilase_family


id: CL:4345
description: Mixed, incl. Pectin lyase fold, and Subtilisin SUB1-like catalytic domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4345_Mixed,_incl._Pectin_lyase_fold,_and_Subtilisin_SUB1-like_catalytic_domain


id: CL:4365
description: YD repeat, and Rhs repeat-associated core
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4365_YD_repeat,_and_Rhs_repeat-associated_core


id: CL:4380
description: Mixed, incl. Innate Immune System, and Infection with Mycobacterium tuberculosis
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4380_Mixed,_incl._Innate_Immune_System,_and_Infection_with_Mycobacterium_tuberculosis


id: CL:4396
description: Mixed, incl. Response to host, and Type 1 protein exporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4396_Mixed,_incl._Response_to_host,_and_Type_1_protein_exporter


id: CL:4398
description: Response to host, and STAS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4398_Response_to_host,_and_STAS_domain


id: CL:4410
description: Type 1 protein exporter, and Radical SAM, alpha/beta horseshoe
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4410_Type_1_protein_exporter,_and_Radical_SAM,_alpha/beta_horseshoe


id: CL:4420
description: Mixed, incl. PEGA domain, and Alpha-galactosidase, NEW3 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4420_Mixed,_incl._PEGA_domain,_and_Alpha-galactosidase,_NEW3_domain


id: CL:4439
description: Metallopeptidase, catalytic domain superfamily, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4439_Metallopeptidase,_catalytic_domain_superfamily,_and_Signal


id: CL:4457
description: Mixed, incl. Lipid transporter activity, and Sigma-70 region 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4457_Mixed,_incl._Lipid_transporter_activity,_and_Sigma-70_region_2


id: CL:446
description: ATP-dependent protein folding chaperone, and Peptidase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:446_ATP-dependent_protein_folding_chaperone,_and_Peptidase_complex


id: CL:4474
description: Mixed, incl. Symporter activity, and Response to nutrient levels
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4474_Mixed,_incl._Symporter_activity,_and_Response_to_nutrient_levels


id: CL:4475
description: Mixed, incl. Symporter activity, and Response to nutrient levels
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4475_Mixed,_incl._Symporter_activity,_and_Response_to_nutrient_levels


id: CL:4476
description: Mixed, incl. Symporter activity, and Response to nutrient levels
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4476_Mixed,_incl._Symporter_activity,_and_Response_to_nutrient_levels


id: CL:4477
description: Mixed, incl. Sodium/solute symporter, and Response to nutrient levels
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4477_Mixed,_incl._Sodium/solute_symporter,_and_Response_to_nutrient_levels


id: CL:4478
description: Mixed, incl. Response to nutrient levels, and Arsenite transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4478_Mixed,_incl._Response_to_nutrient_levels,_and_Arsenite_transport


id: CL:4493
description: Mixed, incl. Sodium/solute symporter, and Metallocarboxypeptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4493_Mixed,_incl._Sodium/solute_symporter,_and_Metallocarboxypeptidase_activity


id: CL:4504
description: Mixed, incl. Creatinase, N-terminal, and Sodium:dicarboxylate symporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4504_Mixed,_incl._Creatinase,_N-terminal,_and_Sodium:dicarboxylate_symporter


id: CL:4517
description: Mixed, incl. Solute carrier family 13, and Ribbon-helix-helix
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4517_Mixed,_incl._Solute_carrier_family_13,_and_Ribbon-helix-helix


id: CL:4528
description: Mixed, incl. Antiporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4528_Mixed,_incl._Antiporter_activity


id: CL:4538
description: Mixed, incl. Recombinational repair, and Peroxidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4538_Mixed,_incl._Recombinational_repair,_and_Peroxidase_activity


id: CL:4539
description: Mixed, incl. Recombinational repair, and CBS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4539_Mixed,_incl._Recombinational_repair,_and_CBS_domain


id: CL:4541
description: Mixed, incl. Recombinational repair, and AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4541_Mixed,_incl._Recombinational_repair,_and_AAA_domain


id: CL:4560
description: Mixed, incl. Peroxidase activity, and Protein phosphopantetheinylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4560_Mixed,_incl._Peroxidase_activity,_and_Protein_phosphopantetheinylation


id: CL:4577
description: Mixed, incl. Latent infection - Other responses of Mtb to phagocytosis, and ABC transporters
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4577_Mixed,_incl._Latent_infection_-_Other_responses_of_Mtb_to_phagocytosis,_and_ABC_transporters


id: CL:4578
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4578_Mixed,_incl._Latent_infection_-_Other_responses_of_Mtb_to_phagocytosis,_and_Glutamine_family_amino_acid_metabolic_process

description:
  Mixed, incl. Latent infection - Other responses of Mtb to phagocytosis, and Glutamine family amino acid metabolic process


id: CL:4580
description: Latent infection - Other responses of Mtb to phagocytosis, and Peptide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4580_Latent_infection_-_Other_responses_of_Mtb_to_phagocytosis,_and_Peptide_transport


id: CL:4581
description: Nickel cation transmembrane transporter activity, and Solute-binding protein family 5
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4581_Nickel_cation_transmembrane_transporter_activity,_and_Solute-binding_protein_family_5


id: CL:4582
description: Nickel cation transmembrane transporter activity, and Peptide/nickel binding protein, MppA-type
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4582_Nickel_cation_transmembrane_transporter_activity,_and_Peptide/nickel_binding_protein,_MppA-type


id: CL:4583
description: Nickel cation transmembrane transporter activity, and Peptide/nickel binding protein, MppA-type
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4583_Nickel_cation_transmembrane_transporter_activity,_and_Peptide/nickel_binding_protein,_MppA-type


id: CL:4585
description: Nickel cation transmembrane transporter activity, and Peptide/nickel binding protein, MppA-type
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4585_Nickel_cation_transmembrane_transporter_activity,_and_Peptide/nickel_binding_protein,_MppA-type


id: CL:4586
description: Nickel cation transmembrane transporter activity, and Peptide/nickel binding protein, MppA-type
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4586_Nickel_cation_transmembrane_transporter_activity,_and_Peptide/nickel_binding_protein,_MppA-type


id: CL:4588
description: Nickel cation transmembrane transporter activity, and Peptide/nickel binding protein, MppA-type
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4588_Nickel_cation_transmembrane_transporter_activity,_and_Peptide/nickel_binding_protein,_MppA-type


id: CL:4590
description: ABC transporter type 1, GsiC-like, N-terminal domain, and Peptide/nickel binding protein, MppA-type
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4590_ABC_transporter_type_1,_GsiC-like,_N-terminal_domain,_and_Peptide/nickel_binding_protein,_MppA-type


id: CL:4604
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4604_Mixed,_incl._Ribbon-helix-helix_protein,_copG_family,_and_ABC_transporter_type_1,_GsiC-like,_N-terminal_domain

description:
  Mixed, incl. Ribbon-helix-helix protein, copG family, and ABC transporter type 1, GsiC-like, N-terminal domain


id: CL:4620
description: Nickel cation transmembrane transporter activity, and Peptide/nickel binding protein, MppA-type
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4620_Nickel_cation_transmembrane_transporter_activity,_and_Peptide/nickel_binding_protein,_MppA-type


id: CL:4632
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4632_Oligopeptide/dipeptide_transporter,_C-terminal_region,_and_Nickel_cation_transmembrane_transporter_activity

description:
  Oligopeptide/dipeptide transporter, C-terminal region, and Nickel cation transmembrane transporter activity


id: CL:4634
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4634_Oligopeptide/dipeptide_transporter,_C-terminal_region,_and_Nickel_cation_transmembrane_transporter_activity

description:
  Oligopeptide/dipeptide transporter, C-terminal region, and Nickel cation transmembrane transporter activity


id: CL:4650
description: beta-Lactam resistance, and ABC transporter type 1, GsiC-like, N-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4650_beta-Lactam_resistance,_and_ABC_transporter_type_1,_GsiC-like,_N-terminal_domain


id: CL:4676
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4676_Mixed,_incl._Amide_transmembrane_transporter_activity,_and_N-terminal_TM_domain_of_oligopeptide_transport_permease_C

description:
  Mixed, incl. Amide transmembrane transporter activity, and N-terminal TM domain of oligopeptide transport permease C


id: CL:4694
description: Peptide transport, and Nickel cation transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4694_Peptide_transport,_and_Nickel_cation_transmembrane_transporter_activity


id: CL:4705
description: Mixed, incl. Tail specific protease, and WD40/YVTN repeat-like-containing domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4705_Mixed,_incl._Tail_specific_protease,_and_WD40/YVTN_repeat-like-containing_domain_superfamily


id: CL:471
description: Mixed, incl. Homologous recombination, and Nucleotide excision repair
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:471_Mixed,_incl._Homologous_recombination,_and_Nucleotide_excision_repair


id: CL:4714
description: Mixed, incl. Peptidase M28, and Peptidase dimerisation domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4714_Mixed,_incl._Peptidase_M28,_and_Peptidase_dimerisation_domain


id: CL:472
description: Mixed, incl. DNA replication, and DNA repair
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:472_Mixed,_incl._DNA_replication,_and_DNA_repair


id: CL:4726
description: Mixed, incl. Arginine metabolic process, and Amino acid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4726_Mixed,_incl._Arginine_metabolic_process,_and_Amino_acid_transport


id: CL:4727
description: Mixed, incl. Arginine metabolic process, and Polyamine transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4727_Mixed,_incl._Arginine_metabolic_process,_and_Polyamine_transport


id: CL:4728
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4728_Mixed,_incl._Arginine_metabolic_process,_and_Amino_acid_ABC_transporter,_permease_protein,_3-TM_domain

description:
  Mixed, incl. Arginine metabolic process, and Amino acid ABC transporter, permease protein, 3-TM domain


id: CL:4729
description: Arginine metabolic process, and Ureohydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4729_Arginine_metabolic_process,_and_Ureohydrolase


id: CL:474
description: Mixed, incl. Mismatch repair, and SOS response
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:474_Mixed,_incl._Mismatch_repair,_and_SOS_response


id: CL:475
description: Mismatch repair, and Nucleotide excision repair
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:475_Mismatch_repair,_and_Nucleotide_excision_repair


id: CL:4753
description: Ureohydrolase, and Arginine decarboxylase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4753_Ureohydrolase,_and_Arginine_decarboxylase_activity


id: CL:476
description: Mixed, incl. Nucleotide excision repair, and DNA damage sensor activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:476_Mixed,_incl._Nucleotide_excision_repair,_and_DNA_damage_sensor_activity


id: CL:4762
description: Amino acid ABC transporter, permease protein, 3-TM domain, and Ligand-gated channel activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4762_Amino_acid_ABC_transporter,_permease_protein,_3-TM_domain,_and_Ligand-gated_channel_activity


id: CL:4764
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4764_Ionotropic_glutamate_receptor,_C-terminal,_and_Amino_acid_ABC_transporter,_permease_protein,_3-TM_domain

description:
  Ionotropic glutamate receptor, C-terminal, and Amino acid ABC transporter, permease protein, 3-TM domain


id: CL:478
description: Nucleotide excision repair, and Mismatch repair
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:478_Nucleotide_excision_repair,_and_Mismatch_repair


id: CL:4783
description: Mixed, incl. Polyamine transport, and Bacterial extracellular solute-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4783_Mixed,_incl._Polyamine_transport,_and_Bacterial_extracellular_solute-binding_protein


id: CL:4785
description: TOBE domain, and Bacterial extracellular solute-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4785_TOBE_domain,_and_Bacterial_extracellular_solute-binding_protein


id: CL:4801
description: Polyamine transport, and Lysine degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4801_Polyamine_transport,_and_Lysine_degradation


id: CL:481
description: Mixed, incl. Mismatch repair, and DNA-directed DNA polymerase
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:481_Mixed,_incl._Mismatch_repair,_and_DNA-directed_DNA_polymerase


id: CL:4815
description: Cysteine and methionine metabolism, and Alpha/beta hydrolase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4815_Cysteine_and_methionine_metabolism,_and_Alpha/beta_hydrolase_family


id: CL:4817
description: Mixed, incl. Spermidine biosynthesis, and Methylthioadenosine phosphorylase (MTAP)
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4817_Mixed,_incl._Spermidine_biosynthesis,_and_Methylthioadenosine_phosphorylase_(MTAP)


id: CL:4845
description: Mixed, incl. Cobalamin metabolic process, and ABC transporter, CbiO/EcfA subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4845_Mixed,_incl._Cobalamin_metabolic_process,_and_ABC_transporter,_CbiO/EcfA_subunit


id: CL:4846
description: Mixed, incl. Cobalamin metabolic process, and Periplasmic binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4846_Mixed,_incl._Cobalamin_metabolic_process,_and_Periplasmic_binding_protein


id: CL:4849
description: Mixed, incl. Cobalamin metabolic process, and Periplasmic binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4849_Mixed,_incl._Cobalamin_metabolic_process,_and_Periplasmic_binding_protein


id: CL:4871
description: FecCD transport family, and Periplasmic binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4871_FecCD_transport_family,_and_Periplasmic_binding_protein


id: CL:4898
description: ABC transporter, CbiO/EcfA subunit, and Cobalt transport protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4898_ABC_transporter,_CbiO/EcfA_subunit,_and_Cobalt_transport_protein


id: CL:4900
description: Cobalt transport protein, and ABC transporter, CbiO/EcfA subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4900_Cobalt_transport_protein,_and_ABC_transporter,_CbiO/EcfA_subunit


id: CL:4903
description: Cobalt transport protein, and ABC transporter, CbiO/EcfA subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4903_Cobalt_transport_protein,_and_ABC_transporter,_CbiO/EcfA_subunit


id: CL:4936
description: Mixed, incl. ABC-2 transporter, and ABC transporter-like, ATP-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4936_Mixed,_incl._ABC-2_transporter,_and_ABC_transporter-like,_ATP-binding_domain


id: CL:4937
description: Mixed, incl. ABC-2 transporter, and ABC transporter-like, ATP-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4937_Mixed,_incl._ABC-2_transporter,_and_ABC_transporter-like,_ATP-binding_domain


id: CL:4938
description: Mixed, incl. ABC-2 transporter, and ABC transporter-like, ATP-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4938_Mixed,_incl._ABC-2_transporter,_and_ABC_transporter-like,_ATP-binding_domain


id: CL:4939
description: Mixed, incl. ABC-2 transporter, and ABC transporter-like, ATP-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4939_Mixed,_incl._ABC-2_transporter,_and_ABC_transporter-like,_ATP-binding_domain


id: CL:4940
description: Mixed, incl. ABC-2 transporter, and ABC transporter-like, ATP-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4940_Mixed,_incl._ABC-2_transporter,_and_ABC_transporter-like,_ATP-binding_domain


id: CL:4941
description: Mixed, incl. ABC-2 transporter, and Domain of unknown function (DUF4162)
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4941_Mixed,_incl._ABC-2_transporter,_and_Domain_of_unknown_function_(DUF4162)


id: CL:4942
description: Mixed, incl. ABC-2 transporter, and Domain of unknown function (DUF4162)
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4942_Mixed,_incl._ABC-2_transporter,_and_Domain_of_unknown_function_(DUF4162)


id: CL:4943
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4943_Mixed,_incl._ABC-2_transporter,_and_Daunorubicin_resistance_ABC_transporter_ATP-binding_subunit_DrrA

description:
  Mixed, incl. ABC-2 transporter, and Daunorubicin resistance ABC transporter ATP-binding subunit DrrA


id: CL:4945
description: ABC-2 transporter, and Daunorubicin resistance ABC transporter ATP-binding subunit DrrA
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4945_ABC-2_transporter,_and_Daunorubicin_resistance_ABC_transporter_ATP-binding_subunit_DrrA


id: CL:4947
description: ABC-2 transporter, and Daunorubicin resistance ABC transporter ATP-binding subunit DrrA
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4947_ABC-2_transporter,_and_Daunorubicin_resistance_ABC_transporter_ATP-binding_subunit_DrrA


id: CL:4981
description: ABC-2 type transporter, and ABC transporter-like, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4981_ABC-2_type_transporter,_and_ABC_transporter-like,_conserved_site


id: CL:4991
description: Domain of unknown function (DUF4162), and ABC-2 type transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:4991_Domain_of_unknown_function_(DUF4162),_and_ABC-2_type_transporter


id: CL:5002
description: Mixed, incl. TTHA0068-like superfamily, and ABC-2 family transporter protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5002_Mixed,_incl._TTHA0068-like_superfamily,_and_ABC-2_family_transporter_protein


id: CL:5014
description: Mixed, incl. Uracil-DNA glycosylase-like, and FecR protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5014_Mixed,_incl._Uracil-DNA_glycosylase-like,_and_FecR_protein


id: CL:5025
description: Mixed, incl. ABC-2 family transporter protein, and Penicillin binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5025_Mixed,_incl._ABC-2_family_transporter_protein,_and_Penicillin_binding


id: CL:5041
description: Mixed, incl. Threonine catabolic process, and Domain of unknown function DUF4162
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5041_Mixed,_incl._Threonine_catabolic_process,_and_Domain_of_unknown_function_DUF4162


id: CL:5054
description: Mixed, incl. GntR, C-terminal, and Positive regulation of gene expression
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5054_Mixed,_incl._GntR,_C-terminal,_and_Positive_regulation_of_gene_expression


id: CL:5056
description: Mixed, incl. Positive regulation of gene expression, and Transcription regulator HTH, GntR
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5056_Mixed,_incl._Positive_regulation_of_gene_expression,_and_Transcription_regulator_HTH,_GntR


id: CL:5080
description: Mixed, incl. Cellular iron ion homeostasis, and Anti-sigma factor, zinc-finger domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5080_Mixed,_incl._Cellular_iron_ion_homeostasis,_and_Anti-sigma_factor,_zinc-finger_domain_superfamily


id: CL:5091
description: Mostly uncharacterized, incl. Acyl-CoA N-acyltransferase, and Suppression of phagosomal maturation
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5091_Mostly_uncharacterized,_incl._Acyl-CoA_N-acyltransferase,_and_Suppression_of_phagosomal_maturation


id: CL:5092
description: Mostly uncharacterized, incl. Suppression of phagosomal maturation, and Acyl-CoA N-acyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5092_Mostly_uncharacterized,_incl._Suppression_of_phagosomal_maturation,_and_Acyl-CoA_N-acyltransferase


id: CL:5093
description: Mostly uncharacterized, incl. Major Facilitator Superfamily, and DNA-binding HTH domain, TetR-type
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5093_Mostly_uncharacterized,_incl._Major_Facilitator_Superfamily,_and_DNA-binding_HTH_domain,_TetR-type


id: CL:5094
description: Mostly uncharacterized, incl. DNA-binding HTH domain, TetR-type, and Non-homologous end-joining
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5094_Mostly_uncharacterized,_incl._DNA-binding_HTH_domain,_TetR-type,_and_Non-homologous_end-joining


id: CL:5095
description: Mixed, incl. DNA-binding HTH domain, TetR-type, and Non-homologous end-joining
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5095_Mixed,_incl._DNA-binding_HTH_domain,_TetR-type,_and_Non-homologous_end-joining


id: CL:5096
description: Mixed, incl. Non-homologous end-joining, and DNA glycosylase AlkZ-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5096_Mixed,_incl._Non-homologous_end-joining,_and_DNA_glycosylase_AlkZ-like


id: CL:5097
description: Mixed, incl. Non-homologous end-joining, and DNA glycosylase AlkZ-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5097_Mixed,_incl._Non-homologous_end-joining,_and_DNA_glycosylase_AlkZ-like


id: CL:5099
description: Non-homologous end-joining, and Glucosidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5099_Non-homologous_end-joining,_and_Glucosidase_activity


id: CL:510
description: Regulation of response to stimulus, and Damaged DNA binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:510_Regulation_of_response_to_stimulus,_and_Damaged_DNA_binding


id: CL:5123
description: Mixed, incl. L-methylmalonyl-CoA metabolic process, and RNA polymerase sigma-70 like
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5123_Mixed,_incl._L-methylmalonyl-CoA_metabolic_process,_and_RNA_polymerase_sigma-70_like


id: CL:5135
description: Mixed, incl. DNA-binding HTH domain, TetR-type, and Efflux transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5135_Mixed,_incl._DNA-binding_HTH_domain,_TetR-type,_and_Efflux_transmembrane_transporter_activity


id: CL:5138
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5138_Mixed,_incl._Efflux_transmembrane_transporter_activity,_and_DNA-binding_HTH_domain,_TetR-type,_conserved_site

description:
  Mixed, incl. Efflux transmembrane transporter activity, and DNA-binding HTH domain, TetR-type, conserved site


id: CL:5153
description: Mixed, incl. DNA-binding HTH domain, TetR-type, and Protein of unknown function (DUF664)
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5153_Mixed,_incl._DNA-binding_HTH_domain,_TetR-type,_and_Protein_of_unknown_function_(DUF664)


id: CL:5164
description: Mixed, incl. Peptidase C26, and VanW like protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5164_Mixed,_incl._Peptidase_C26,_and_VanW_like_protein


id: CL:5165
description: Mixed, incl. VanW like protein, and PEP-utilising enzyme, mobile domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5165_Mixed,_incl._VanW_like_protein,_and_PEP-utilising_enzyme,_mobile_domain


id: CL:5176
description: Peptidase C26, and Alba-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5176_Peptidase_C26,_and_Alba-like_domain_superfamily


id: CL:5185
description: Major Facilitator Superfamily, and Sulfite exporter TauE/SafE
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5185_Major_Facilitator_Superfamily,_and_Sulfite_exporter_TauE/SafE


id: CL:5187
description: Mixed, incl. Transmembrane secretion effector, and Sulfite exporter TauE/SafE
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5187_Mixed,_incl._Transmembrane_secretion_effector,_and_Sulfite_exporter_TauE/SafE


id: CL:5211
description: Mixed, incl. Acetyltransferase (GNAT) family, and Methyltransferase type 11
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5211_Mixed,_incl._Acetyltransferase_(GNAT)_family,_and_Methyltransferase_type_11


id: CL:5213
description: Mixed, incl. Putative cyclase, and tRNA methylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5213_Mixed,_incl._Putative_cyclase,_and_tRNA_methylation


id: CL:522
description: DNA polymerase complex, and Helix-hairpin-helix motif
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:522_DNA_polymerase_complex,_and_Helix-hairpin-helix_motif


id: CL:5232
description: Mixed, incl. Polysaccharide biosynthesis protein, and Acetyltransferase (GNAT) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5232_Mixed,_incl._Polysaccharide_biosynthesis_protein,_and_Acetyltransferase_(GNAT)_domain


id: CL:5249
description: Mixed, incl. GNAT domain, and Peptidase S9, prolyl oligopeptidase, catalytic domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5249_Mixed,_incl._GNAT_domain,_and_Peptidase_S9,_prolyl_oligopeptidase,_catalytic_domain


id: CL:5250
description: Mixed, incl. Peptidase S9, prolyl oligopeptidase, catalytic domain, and FMN binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5250_Mixed,_incl._Peptidase_S9,_prolyl_oligopeptidase,_catalytic_domain,_and_FMN_binding


id: CL:5251
description: Mixed, incl. Peptidase S9, prolyl oligopeptidase, catalytic domain, and FMN binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5251_Mixed,_incl._Peptidase_S9,_prolyl_oligopeptidase,_catalytic_domain,_and_FMN_binding


id: CL:5253
description: Mixed, incl. Peptidase S9, prolyl oligopeptidase, catalytic domain, and Alkaloid catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5253_Mixed,_incl._Peptidase_S9,_prolyl_oligopeptidase,_catalytic_domain,_and_Alkaloid_catabolic_process


id: CL:5254
description: Peptidase S9, prolyl oligopeptidase, catalytic domain, and Metallocarboxypeptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5254_Peptidase_S9,_prolyl_oligopeptidase,_catalytic_domain,_and_Metallocarboxypeptidase_activity


id: CL:5265
description: Mixed, incl. Alkaloid catabolic process, and NUDIX domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5265_Mixed,_incl._Alkaloid_catabolic_process,_and_NUDIX_domain


id: CL:5277
description: Mixed, incl. Von Willebrand factor, type A, and Protoporphyrinogen oxidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5277_Mixed,_incl._Von_Willebrand_factor,_type_A,_and_Protoporphyrinogen_oxidase_activity


id: CL:5290
description: Mixed, incl. AAA ATPase domain, and Omega peptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5290_Mixed,_incl._AAA_ATPase_domain,_and_Omega_peptidase_activity


id: CL:5299
description: Mixed, incl. Acetyltransferase (GNAT) domain, and GTP diphosphokinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5299_Mixed,_incl._Acetyltransferase_(GNAT)_domain,_and_GTP_diphosphokinase_activity


id: CL:5301
description: Mixed, incl. Acetyltransferase (GNAT) domain, and GTP diphosphokinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5301_Mixed,_incl._Acetyltransferase_(GNAT)_domain,_and_GTP_diphosphokinase_activity


id: CL:5320
description: Mixed, incl. Anti-sigma factor, zinc-finger domain superfamily, and NUDIX domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5320_Mixed,_incl._Anti-sigma_factor,_zinc-finger_domain_superfamily,_and_NUDIX_domain


id: CL:5339
description: MetI-like superfamily, and Bacterial extracellular solute-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5339_MetI-like_superfamily,_and_Bacterial_extracellular_solute-binding_protein


id: CL:5340
description: MetI-like superfamily, and Bacterial extracellular solute-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5340_MetI-like_superfamily,_and_Bacterial_extracellular_solute-binding_protein


id: CL:5341
description: MetI-like superfamily, and Bacterial extracellular solute-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5341_MetI-like_superfamily,_and_Bacterial_extracellular_solute-binding_protein


id: CL:5342
description: MetI-like superfamily, and Bacterial extracellular solute-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5342_MetI-like_superfamily,_and_Bacterial_extracellular_solute-binding_protein


id: CL:5343
description: MetI-like superfamily, and Bacterial extracellular solute-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5343_MetI-like_superfamily,_and_Bacterial_extracellular_solute-binding_protein


id: CL:5344
description: MetI-like superfamily, and Bacterial extracellular solute-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5344_MetI-like_superfamily,_and_Bacterial_extracellular_solute-binding_protein


id: CL:5346
description: MetI-like superfamily, and Bacterial extracellular solute-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5346_MetI-like_superfamily,_and_Bacterial_extracellular_solute-binding_protein


id: CL:5347
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5347_ABC_transporter_type_1,_transmembrane_domain_MetI-like,_and_Bacterial_extracellular_solute-binding_protein

description:
  ABC transporter type 1, transmembrane domain MetI-like, and Bacterial extracellular solute-binding protein


id: CL:5349
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5349_ABC_transporter_type_1,_transmembrane_domain_MetI-like,_and_Bacterial_extracellular_solute-binding_protein

description:
  ABC transporter type 1, transmembrane domain MetI-like, and Bacterial extracellular solute-binding protein


id: CL:5350
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5350_ABC_transporter_type_1,_transmembrane_domain_MetI-like,_and_Bacterial_extracellular_solute-binding_protein

description:
  ABC transporter type 1, transmembrane domain MetI-like, and Bacterial extracellular solute-binding protein


id: CL:5351
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5351_ABC_transporter_type_1,_transmembrane_domain_MetI-like,_and_Bacterial_extracellular_solute-binding_protein

description:
[cell repeats an earlier one in this file: 106 characters]


id: CL:5352
description: Bacterial extracellular solute-binding protein, and ABC-type maltose transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5352_Bacterial_extracellular_solute-binding_protein,_and_ABC-type_maltose_transporter_activity


id: CL:5354
description: Bacterial extracellular solute-binding protein, and ABC-type maltose transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5354_Bacterial_extracellular_solute-binding_protein,_and_ABC-type_maltose_transporter_activity


id: CL:5355
description: Bacterial extracellular solute-binding protein, and ABC-type maltose transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5355_Bacterial_extracellular_solute-binding_protein,_and_ABC-type_maltose_transporter_activity


id: CL:5357
description: Bacterial extracellular solute-binding protein, and ABC-type maltose transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5357_Bacterial_extracellular_solute-binding_protein,_and_ABC-type_maltose_transporter_activity


id: CL:5374
description: Carbohydrate transport, and ABC-type maltose transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5374_Carbohydrate_transport,_and_ABC-type_maltose_transporter_activity


id: CL:5388
description: Bacterial extracellular solute-binding protein, and ABC-type maltose transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5388_Bacterial_extracellular_solute-binding_protein,_and_ABC-type_maltose_transporter_activity


id: CL:5389
description: Bacterial extracellular solute-binding protein, and ABC-type maltose transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5389_Bacterial_extracellular_solute-binding_protein,_and_ABC-type_maltose_transporter_activity


id: CL:539
description: DNA topoisomerase, type IIA-like domain superfamily, and DNA replication initiation
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:539_DNA_topoisomerase,_type_IIA-like_domain_superfamily,_and_DNA_replication_initiation


id: CL:5400
description: Bacterial extracellular solute-binding protein, and ABC-type maltose transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5400_Bacterial_extracellular_solute-binding_protein,_and_ABC-type_maltose_transporter_activity


id: CL:5424
description: Bacterial extracellular solute-binding protein, and ABC-type maltose transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5424_Bacterial_extracellular_solute-binding_protein,_and_ABC-type_maltose_transporter_activity


id: CL:5425
description: Bacterial extracellular solute-binding protein, and ABC-type maltose transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5425_Bacterial_extracellular_solute-binding_protein,_and_ABC-type_maltose_transporter_activity


id: CL:5426
description: Bacterial extracellular solute-binding protein, and ABC-type maltose transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5426_Bacterial_extracellular_solute-binding_protein,_and_ABC-type_maltose_transporter_activity


id: CL:5428
description: Bacterial extracellular solute-binding protein, and ABC-type maltose transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5428_Bacterial_extracellular_solute-binding_protein,_and_ABC-type_maltose_transporter_activity


id: CL:5430
description: Enzyme regulator activity, and ABC-type maltose transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5430_Enzyme_regulator_activity,_and_ABC-type_maltose_transporter_activity


id: CL:5461
description: Bacterial extracellular solute-binding protein, and ABC-type maltose transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5461_Bacterial_extracellular_solute-binding_protein,_and_ABC-type_maltose_transporter_activity


id: CL:5473
description: Enzyme regulator activity, and ABC-type maltose transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5473_Enzyme_regulator_activity,_and_ABC-type_maltose_transporter_activity


id: CL:5494
description: Mixed, incl. Crp-type HTH domain, and Carbohydrate kinase, FGGY, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5494_Mixed,_incl._Crp-type_HTH_domain,_and_Carbohydrate_kinase,_FGGY,_conserved_site


id: CL:5503
description: Mixed, incl. MarR family, and HNH nuclease
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5503_Mixed,_incl._MarR_family,_and_HNH_nuclease


id: CL:5520
description: Mixed, incl. Galactose mutarotase-like, and L-arabinose isomerase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5520_Mixed,_incl._Galactose_mutarotase-like,_and_L-arabinose_isomerase_activity


id: CL:553
description: Sigma-70 factor, region 1.2, and DNA replication, synthesis of RNA primer
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:553_Sigma-70_factor,_region_1.2,_and_DNA_replication,_synthesis_of_RNA_primer


id: CL:5530
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5530_Mixed,_incl._ATP-binding_cassette_(ABC)_transporter_complex,_substrate-binding_subunit-containing,_and_MalF,_N-terminal

description:
  Mixed, incl. ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing, and MalF, N-terminal


id: CL:5533
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5533_ATP-binding_cassette_(ABC)_transporter_complex,_substrate-binding_subunit-containing,_and_MalF,_N-terminal

description:
  ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing, and MalF, N-terminal


id: CL:5563
description: Mixed, incl. Acetyltransferase (GNAT) domain, and Enzyme regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5563_Mixed,_incl._Acetyltransferase_(GNAT)_domain,_and_Enzyme_regulator_activity


id: CL:5574
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5574_Mixed,_incl._tRNA_endonuclease-like_domain_superfamily,_and_Transcriptional_regulator_LacI/GalR-like,_sensor_domain

description:
  Mixed, incl. tRNA endonuclease-like domain superfamily, and Transcriptional regulator LacI/GalR-like, sensor domain


id: CL:5587
description: Mixed, incl. Ribonucleoside hydrolase-like, and Restriction endonuclease
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5587_Mixed,_incl._Ribonucleoside_hydrolase-like,_and_Restriction_endonuclease


id: CL:5599
description: Mixed, incl. Methyltransferase domain, and Methyltransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5599_Mixed,_incl._Methyltransferase_domain,_and_Methyltransferase_domain


id: CL:5601
description: Mixed, incl. Carbohydrate/purine kinase, PfkB, conserved site, and GlmS/AgaS, SIS domain 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5601_Mixed,_incl._Carbohydrate/purine_kinase,_PfkB,_conserved_site,_and_GlmS/AgaS,_SIS_domain_1


id: CL:5618
description: Mixed, incl. ADP-ribosylglycohydrolase, and Terpene catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5618_Mixed,_incl._ADP-ribosylglycohydrolase,_and_Terpene_catabolic_process


id: CL:5620
description: Mixed, incl. Site of DNA damage, and Terpene catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5620_Mixed,_incl._Site_of_DNA_damage,_and_Terpene_catabolic_process


id: CL:5623
description: Terpene catabolic process, and Site of DNA damage
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5623_Terpene_catabolic_process,_and_Site_of_DNA_damage


id: CL:564
description: Mixed, incl. glycyl-tRNA aminoacylation, and Holliday junction helicase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:564_Mixed,_incl._glycyl-tRNA_aminoacylation,_and_Holliday_junction_helicase_complex


id: CL:5647
description: Mixed, incl. Domain of unknown function DUF5615, and Site of DNA damage
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5647_Mixed,_incl._Domain_of_unknown_function_DUF5615,_and_Site_of_DNA_damage


id: CL:566
description: Holliday junction helicase complex, and Ribonuclease H superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:566_Holliday_junction_helicase_complex,_and_Ribonuclease_H_superfamily


id: CL:5662
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5662_Mixed,_incl._Cytochrome_cd1-nitrite_reductase-like,_haem_d1_domain_superfamily,_and_Response_to_host

description:
  Mixed, incl. Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily, and Response to host


id: CL:5683
description: Mixed, incl. ATPase, nucleotide binding domain, and SIS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5683_Mixed,_incl._ATPase,_nucleotide_binding_domain,_and_SIS_domain


id: CL:5685
description: Mixed, incl. ATPase, nucleotide binding domain, and Amino sugar metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5685_Mixed,_incl._ATPase,_nucleotide_binding_domain,_and_Amino_sugar_metabolic_process


id: CL:5686
description: Mixed, incl. Amino sugar metabolic process, and SIS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5686_Mixed,_incl._Amino_sugar_metabolic_process,_and_SIS_domain


id: CL:5687
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5687_Mixed,_incl._Amino_sugar_and_nucleotide_sugar_metabolism,_and_Hydrolase_activity,_hydrolyzing_O-glycosyl_compounds

description:
  Mixed, incl. Amino sugar and nucleotide sugar metabolism, and Hydrolase activity, hydrolyzing O-glycosyl compounds


id: CL:5688
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5688_Mixed,_incl._Amino_sugar_metabolic_process,_and_Hydrolase_activity,_hydrolyzing_O-glycosyl_compounds

description:
  Mixed, incl. Amino sugar metabolic process, and Hydrolase activity, hydrolyzing O-glycosyl compounds


id: CL:5689
description: Mixed, incl. Amino sugar metabolic process, and L-glutamine aminotransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5689_Mixed,_incl._Amino_sugar_metabolic_process,_and_L-glutamine_aminotransferase_activity


id: CL:5691
description: Amino sugar metabolic process, and L-glutamine aminotransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5691_Amino_sugar_metabolic_process,_and_L-glutamine_aminotransferase_activity


id: CL:5692
description: L-glutamine aminotransferase activity, and Ammonia ligase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5692_L-glutamine_aminotransferase_activity,_and_Ammonia_ligase_activity


id: CL:5703
description: N-acetylglucosamine metabolic process, and Amino sugar catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5703_N-acetylglucosamine_metabolic_process,_and_Amino_sugar_catabolic_process


id: CL:5726
description: Mixed, incl. Hydrolase activity, hydrolyzing O-glycosyl compounds, and Peptidoglycan turnover
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5726_Mixed,_incl._Hydrolase_activity,_hydrolyzing_O-glycosyl_compounds,_and_Peptidoglycan_turnover


id: CL:5727
description: Mixed, incl. Protein of unknown function (DUF1343), and Peptidoglycan turnover
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5727_Mixed,_incl._Protein_of_unknown_function_(DUF1343),_and_Peptidoglycan_turnover


id: CL:5731
description: Protein of unknown function (DUF1343), and Glycoside hydrolase, family 3, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5731_Protein_of_unknown_function_(DUF1343),_and_Glycoside_hydrolase,_family_3,_N-terminal


id: CL:5750
description: Hexosaminidase activity, and Other glycan degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5750_Hexosaminidase_activity,_and_Other_glycan_degradation


id: CL:5761
description: Mixed, incl. SIS domain, and Endonuclease/exonuclease/phosphatase
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5761_Mixed,_incl._SIS_domain,_and_Endonuclease/exonuclease/phosphatase


id: CL:5762
description: Mixed, incl. SIS domain, and Endonuclease/exonuclease/phosphatase
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5762_Mixed,_incl._SIS_domain,_and_Endonuclease/exonuclease/phosphatase


id: CL:5763
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5763_Mixed,_incl._UbiC_transcription_regulator-associated,_and_Thiosulphate_sulfurtransferase,_conserved_site

description:
  Mixed, incl. UbiC transcription regulator-associated, and Thiosulphate sulfurtransferase, conserved site


id: CL:5774
description: Mixed, incl. SIS domain, and Amino-acid racemase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5774_Mixed,_incl._SIS_domain,_and_Amino-acid_racemase_activity


id: CL:5784
description: WD40-like beta propeller, and Porin activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5784_WD40-like_beta_propeller,_and_Porin_activity


id: CL:5794
description: Mixed, incl. Oxoprolinase family, and Mannosamine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5794_Mixed,_incl._Oxoprolinase_family,_and_Mannosamine_metabolic_process


id: CL:5796
description: Mixed, incl. Oxoprolinase family, and Cytosine permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5796_Mixed,_incl._Oxoprolinase_family,_and_Cytosine_permease


id: CL:5811
description: Mannosamine metabolic process, and FAD dependent oxidoreductase
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5811_Mannosamine_metabolic_process,_and_FAD_dependent_oxidoreductase


id: CL:5821
description: ROK family, and Alpha-galactosidase, NEW3 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5821_ROK_family,_and_Alpha-galactosidase,_NEW3_domain


id: CL:5833
description: Alpha-galactosidase, NEW3 domain, and Winged helix-turn-helix DNA-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5833_Alpha-galactosidase,_NEW3_domain,_and_Winged_helix-turn-helix_DNA-binding


id: CL:584
description: Mixed, incl. Potassium ion transport, and Primosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:584_Mixed,_incl._Potassium_ion_transport,_and_Primosome


id: CL:585
description: Potassium ion transport, and Anion channel activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:585_Potassium_ion_transport,_and_Anion_channel_activity


id: CL:5851
description: Mixed, incl. Carbohydrate catabolic process, and ABC transporter, permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5851_Mixed,_incl._Carbohydrate_catabolic_process,_and_ABC_transporter,_permease


id: CL:5852
description: Mixed, incl. Pentose and glucuronate interconversions, and Carbohydrate binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5852_Mixed,_incl._Pentose_and_glucuronate_interconversions,_and_Carbohydrate_binding


id: CL:5853
description: Mixed, incl. Carbohydrate catabolic process, and Carbohydrate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5853_Mixed,_incl._Carbohydrate_catabolic_process,_and_Carbohydrate_transport


id: CL:5854
description: Mixed, incl. Periplasmic binding protein, and Pentose transmembrane transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5854_Mixed,_incl._Periplasmic_binding_protein,_and_Pentose_transmembrane_transport


id: CL:5856
description: Mixed, incl. Periplasmic binding protein, and Pentose transmembrane transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5856_Mixed,_incl._Periplasmic_binding_protein,_and_Pentose_transmembrane_transport


id: CL:5857
description: Mixed, incl. Pentose transmembrane transport, and Periplasmic binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5857_Mixed,_incl._Pentose_transmembrane_transport,_and_Periplasmic_binding_protein


id: CL:5860
description: Periplasmic binding protein, and Pentose transmembrane transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5860_Periplasmic_binding_protein,_and_Pentose_transmembrane_transport


id: CL:5882
description: Periplasmic binding protein, and Pentose transmembrane transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5882_Periplasmic_binding_protein,_and_Pentose_transmembrane_transport


id: CL:5896
description: Mixed, incl. Class II aldolase/adducin N-terminal, and Carbohydrate kinase, FGGY, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5896_Mixed,_incl._Class_II_aldolase/adducin_N-terminal,_and_Carbohydrate_kinase,_FGGY,_C-terminal


id: CL:5898
description: L-ribulose-phosphate 4-epimerase activity, and L-fucose isomerase, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5898_L-ribulose-phosphate_4-epimerase_activity,_and_L-fucose_isomerase,_C-terminal


id: CL:5918
description: Mixed, incl. Gfo/Idh/MocA-like oxidoreductase, C-terminal, and Xylose isomerase-like TIM barrel
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5918_Mixed,_incl._Gfo/Idh/MocA-like_oxidoreductase,_C-terminal,_and_Xylose_isomerase-like_TIM_barrel


id: CL:5946
description: Mixed, incl. Pentose and glucuronate interconversions, and Putative sugar-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5946_Mixed,_incl._Pentose_and_glucuronate_interconversions,_and_Putative_sugar-binding_domain


id: CL:5948
description: Zinc-binding dehydrogenase, and Xylose isomerase-like TIM barrel
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5948_Zinc-binding_dehydrogenase,_and_Xylose_isomerase-like_TIM_barrel


id: CL:5969
description: Mixed, incl. ABC transporter substrate-binding protein PnrA-like, and ABC transporter, permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5969_Mixed,_incl._ABC_transporter_substrate-binding_protein_PnrA-like,_and_ABC_transporter,_permease


id: CL:5971
description: ABC transporter substrate-binding protein PnrA-like, and ABC transporter, permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5971_ABC_transporter_substrate-binding_protein_PnrA-like,_and_ABC_transporter,_permease


id: CL:5999
description: Mostly uncharacterized, incl. Lipid catabolic process, and Peptidase M42
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:5999_Mostly_uncharacterized,_incl._Lipid_catabolic_process,_and_Peptidase_M42


id: CL:600
description: Mixed, incl. Primosome, and NusB family
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:600_Mixed,_incl._Primosome,_and_NusB_family


id: CL:6001
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6001_Mostly_uncharacterized,_incl._Alkyl_hydroperoxide_reductase_activity,_and_Mycobacterial_4_TMS_phage_holin,_superfamily_IV

description:
  Mostly uncharacterized, incl. Alkyl hydroperoxide reductase activity, and Mycobacterial 4 TMS phage holin, superfamily IV


id: CL:6002
description: Mixed, incl. Alkyl hydroperoxide reductase activity, and OsmC-like protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6002_Mixed,_incl._Alkyl_hydroperoxide_reductase_activity,_and_OsmC-like_protein


id: CL:6005
description: Alkyl hydroperoxide reductase activity, and Metal-sensitive transcriptional repressor
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6005_Alkyl_hydroperoxide_reductase_activity,_and_Metal-sensitive_transcriptional_repressor


id: CL:6023
description: Mixed, incl. Mycobacterial 4 TMS phage holin, superfamily IV, and Regulation of cell growth
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6023_Mixed,_incl._Mycobacterial_4_TMS_phage_holin,_superfamily_IV,_and_Regulation_of_cell_growth


id: CL:6024
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6024_Mixed,_incl._Flagellar_assembly_protein_A,_and_N4/N6-methyltransferase,_Type_III_restriction-modification_enzyme_EcoPI_Mod_subunit-like

description:
  Mixed, incl. Flagellar assembly protein A, and N4/N6-methyltransferase, Type III restriction-modification enzyme EcoPI Mod subunit-like


id: CL:6035
description: Mixed, incl. Regulation of cell growth, and Mycobacterial 4 TMS phage holin, superfamily IV
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6035_Mixed,_incl._Regulation_of_cell_growth,_and_Mycobacterial_4_TMS_phage_holin,_superfamily_IV


id: CL:6052
description: Mixed, incl. Lipid degradation, and Peptidase M42
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6052_Mixed,_incl._Lipid_degradation,_and_Peptidase_M42


id: CL:6053
description: Mixed, incl. Lipid degradation, and Peptidase M42
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6053_Mixed,_incl._Lipid_degradation,_and_Peptidase_M42


id: CL:6054
description: Lipid degradation, and Vitamin catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6054_Lipid_degradation,_and_Vitamin_catabolic_process


id: CL:6066
description: Peptidase M42, and Alpha/beta hydrolase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6066_Peptidase_M42,_and_Alpha/beta_hydrolase_family


id: CL:6076
description: Mixed, incl. Haloacid dehalogenase-like hydrolase, and Acid phosphatase homologues
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6076_Mixed,_incl._Haloacid_dehalogenase-like_hydrolase,_and_Acid_phosphatase_homologues


id: CL:6092
description: Mixed, incl. CoA-transferase family III, and Metallo-beta-lactamase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6092_Mixed,_incl._CoA-transferase_family_III,_and_Metallo-beta-lactamase_superfamily


id: CL:6094
description: CoA-transferase family III, and acetyl-CoA metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6094_CoA-transferase_family_III,_and_acetyl-CoA_metabolic_process


id: CL:6110
description: DNA breaking-rejoining enzyme, catalytic core, and Transposase, IS4-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6110_DNA_breaking-rejoining_enzyme,_catalytic_core,_and_Transposase,_IS4-like


id: CL:6119
description: Mixed, incl. Inorganic anion transmembrane transporter activity, and KR domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6119_Mixed,_incl._Inorganic_anion_transmembrane_transporter_activity,_and_KR_domain


id: CL:6120
description: Mixed, incl. Putative fluoride ion transporter CrcB, and Anion channel activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6120_Mixed,_incl._Putative_fluoride_ion_transporter_CrcB,_and_Anion_channel_activity


id: CL:6121
description: Mixed, incl. Putative fluoride ion transporter CrcB, and Anion channel activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6121_Mixed,_incl._Putative_fluoride_ion_transporter_CrcB,_and_Anion_channel_activity


id: CL:6136
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6136_Mixed,_incl._ACT_domain,_and_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_linear_amides

description:
  Mixed, incl. ACT domain, and Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides


id: CL:6150
description: Mixed, incl. Chromate transport, and SinI-like, DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6150_Mixed,_incl._Chromate_transport,_and_SinI-like,_DNA-binding_domain


id: CL:617
description: tRNA threonylcarbamoyladenosine modification, and tRNA pseudouridine synthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:617_tRNA_threonylcarbamoyladenosine_modification,_and_tRNA_pseudouridine_synthesis


id: CL:6170
description: Mixed, incl. Bacterial transcriptional regulator, and TRAP transporter solute receptor, TAXI family
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6170_Mixed,_incl._Bacterial_transcriptional_regulator,_and_TRAP_transporter_solute_receptor,_TAXI_family


id: CL:6171
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6171_Mixed,_incl._TRAP_transporter_solute_receptor,_TAXI_family,_and_TRAP_C4-dicarboxylate_transport_system_permease,_fused_DctM-DctQ

description:
  Mixed, incl. TRAP transporter solute receptor, TAXI family, and TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ


id: CL:6172
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6172_Mixed,_incl._TRAP_transporter_solute_receptor,_TAXI_family,_and_TRAP_C4-dicarboxylate_transport_system_permease,_fused_DctM-DctQ

description:
  Mixed, incl. TRAP transporter solute receptor, TAXI family, and TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ


id: CL:6174
description: Mixed, incl. Aldolase/RraA, and Protein of unknown function DUF6282
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6174_Mixed,_incl._Aldolase/RraA,_and_Protein_of_unknown_function_DUF6282


id: CL:6176
description: Aldolase/RraA, and Protein of unknown function DUF6282
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6176_Aldolase/RraA,_and_Protein_of_unknown_function_DUF6282


id: CL:6186
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6186_Mixed,_incl._TRAP_transporter_solute_receptor,_TAXI_family,_and_TRAP_C4-dicarboxylate_transport_system_permease,_fused_DctM-DctQ

description:
  Mixed, incl. TRAP transporter solute receptor, TAXI family, and TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ


id: CL:6198
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6198_TRAP_transporter_solute_receptor,_TAXI_family,_and_TRAP_C4-dicarboxylate_transport_system_permease,_fused_DctM-DctQ

description:
  TRAP transporter solute receptor, TAXI family, and TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ


id: CL:6199
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6199_TRAP_transporter_solute_receptor,_TAXI_family,_and_TRAP_C4-dicarboxylate_transport_system_permease,_fused_DctM-DctQ

description:
  TRAP transporter solute receptor, TAXI family, and TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ


id: CL:6212
description: Mixed, incl. Protein of unknown function DUF1850, and TRAP transporter solute receptor, TAXI family
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6212_Mixed,_incl._Protein_of_unknown_function_DUF1850,_and_TRAP_transporter_solute_receptor,_TAXI_family


id: CL:6222
description: Mixed, incl. Cupin 2, conserved barrel, and Six-hairpin glycosidase-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6222_Mixed,_incl._Cupin_2,_conserved_barrel,_and_Six-hairpin_glycosidase-like_superfamily


id: CL:6238
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6238_Mixed,_incl._Bacterial_transcriptional_regulator,_and_Racemase_activity,_acting_on_amino_acids_and_derivatives

description:
  Mixed, incl. Bacterial transcriptional regulator, and Racemase activity, acting on amino acids and derivatives


id: CL:6239
description: Mixed, incl. Racemase activity, acting on amino acids and derivatives, and CdaR, GGDEF-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6239_Mixed,_incl._Racemase_activity,_acting_on_amino_acids_and_derivatives,_and_CdaR,_GGDEF-like_domain


id: CL:6241
description: Mixed, incl. Racemase activity, acting on amino acids and derivatives, and SEC-C motif
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6241_Mixed,_incl._Racemase_activity,_acting_on_amino_acids_and_derivatives,_and_SEC-C_motif


id: CL:6243
description: AroM protein, and Asp/Glu/hydantoin racemase
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6243_AroM_protein,_and_Asp/Glu/hydantoin_racemase


id: CL:6268
description: Bacterial transcriptional regulator, and Glutathione metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6268_Bacterial_transcriptional_regulator,_and_Glutathione_metabolism


id: CL:6272
description: Bacterial transcriptional regulator, and Glutathione metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6272_Bacterial_transcriptional_regulator,_and_Glutathione_metabolism


id: CL:6284
description: Mixed, incl. L-rhamnonate dehydratase-like, and RutC-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6284_Mixed,_incl._L-rhamnonate_dehydratase-like,_and_RutC-like_superfamily


id: CL:629
description: Galactose catabolic process, and Thioesterase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:629_Galactose_catabolic_process,_and_Thioesterase_domain


id: CL:6294
description: Mixed, incl. Transposition, and Toxin-antitoxin complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6294_Mixed,_incl._Transposition,_and_Toxin-antitoxin_complex


id: CL:6296
description: Mixed, incl. Toxin-antitoxin complex, and Nucleotidyltransferase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6296_Mixed,_incl._Toxin-antitoxin_complex,_and_Nucleotidyltransferase_superfamily


id: CL:6297
description: Mixed, incl. Toxin-antitoxin complex, and Nucleotidyltransferase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6297_Mixed,_incl._Toxin-antitoxin_complex,_and_Nucleotidyltransferase_superfamily


id: CL:6298
description: Mixed, incl. Toxin-antitoxin complex, and Nucleotidyltransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6298_Mixed,_incl._Toxin-antitoxin_complex,_and_Nucleotidyltransferase_domain


id: CL:6301
description: Mixed, incl. Toxin-antitoxin complex, and Nucleotidyltransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6301_Mixed,_incl._Toxin-antitoxin_complex,_and_Nucleotidyltransferase_domain


id: CL:6303
description: Mixed, incl. Nucleotidyltransferase domain, and Nuclease, putative, TT1808
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6303_Mixed,_incl._Nucleotidyltransferase_domain,_and_Nuclease,_putative,_TT1808


id: CL:6304
description: Mixed, incl. Nuclease, putative, TT1808, and Protein of unknown function DUF433
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6304_Mixed,_incl._Nuclease,_putative,_TT1808,_and_Protein_of_unknown_function_DUF433


id: CL:6305
description: Nuclease, putative, TT1808, and Protein of unknown function DUF433
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6305_Nuclease,_putative,_TT1808,_and_Protein_of_unknown_function_DUF433


id: CL:6306
description: Nuclease, putative, TT1808, and Domain of unknown function DUF5615
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6306_Nuclease,_putative,_TT1808,_and_Domain_of_unknown_function_DUF5615


id: CL:6315
description: Protein of unknown function DUF433, and Toxin-antitoxin complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6315_Protein_of_unknown_function_DUF433,_and_Toxin-antitoxin_complex


id: CL:6324
description: Domain of unknown function DUF4351, and Domain of unknown function DUF4277
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6324_Domain_of_unknown_function_DUF4351,_and_Domain_of_unknown_function_DUF4277


id: CL:6334
description: Enoyl-[acyl-carrier-protein] reductase activity, and Uncharacterised conserved protein, UCP020217
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6334_Enoyl-[acyl-carrier-protein]_reductase_activity,_and_Uncharacterised_conserved_protein,_UCP020217


id: CL:6356
description: TTHA1013/TTHA0281-like, and HicA superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6356_TTHA1013/TTHA0281-like,_and_HicA_superfamily


id: CL:6380
description: Mixed, incl. Peptidase M48, and Large family of predicted nucleotide-binding domains
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6380_Mixed,_incl._Peptidase_M48,_and_Large_family_of_predicted_nucleotide-binding_domains


id: CL:639
description: Mixed, incl. Queuosine biosynthesis, and HD domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:639_Mixed,_incl._Queuosine_biosynthesis,_and_HD_domain


id: CL:6400
description: Mixed, incl. DNA alkylation, and HNH endonuclease
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6400_Mixed,_incl._DNA_alkylation,_and_HNH_endonuclease


id: CL:6401
description: Mixed, incl. HNH endonuclease, and DNA alkylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6401_Mixed,_incl._HNH_endonuclease,_and_DNA_alkylation


id: CL:641
description: Queuosine biosynthesis, and HD domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:641_Queuosine_biosynthesis,_and_HD_domain


id: CL:6416
description: Mixed, incl. Restriction/modification DNA-methyltransferase, and Autocatalytic cleavage
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6416_Mixed,_incl._Restriction/modification_DNA-methyltransferase,_and_Autocatalytic_cleavage


id: CL:6434
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6434_Mixed,_incl._Type_I_phosphodiesterase_/_nucleotide_pyrophosphatase,_and_Transferase_activity,_transferring_alkyl_or_aryl_(other_than_methyl)_groups

description:
  Mixed, incl. Type I phosphodiesterase / nucleotide pyrophosphatase, and Transferase activity, transferring alkyl or aryl (other than methyl) groups


id: CL:6447
description: Mixed, incl. Transposition, and DNA integration
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6447_Mixed,_incl._Transposition,_and_DNA_integration


id: CL:6448
description: Mixed, incl. Transposition, and DNA integration
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6448_Mixed,_incl._Transposition,_and_DNA_integration


id: CL:6449
description: Mixed, incl. Transposition, and DNA integration
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6449_Mixed,_incl._Transposition,_and_DNA_integration


id: CL:6450
description: Mixed, incl. Transposition, and RNA-directed DNA polymerase
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6450_Mixed,_incl._Transposition,_and_RNA-directed_DNA_polymerase


id: CL:6451
description: Mixed, incl. Transposition, and RNA-directed DNA polymerase
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6451_Mixed,_incl._Transposition,_and_RNA-directed_DNA_polymerase


id: CL:6452
description: Transposition, and RNA-directed DNA polymerase
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6452_Transposition,_and_RNA-directed_DNA_polymerase


id: CL:6454
description: Mixed, incl. DDE transposase sub-family, and RNA-directed DNA polymerase
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6454_Mixed,_incl._DDE_transposase_sub-family,_and_RNA-directed_DNA_polymerase


id: CL:6456
description: DDE transposase sub-family, and RNA-directed DNA polymerase
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6456_DDE_transposase_sub-family,_and_RNA-directed_DNA_polymerase


id: CL:6490
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6490_Mixed,_incl._Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen,_and_Sister_chromatid_cohesion

description:
  Mixed, incl. Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, and Sister chromatid cohesion


id: CL:6506
description: Mixed, incl. Transposase, IS116/IS110/IS902, and Transposase DDE domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6506_Mixed,_incl._Transposase,_IS116/IS110/IS902,_and_Transposase_DDE_domain


id: CL:6508
description: Mixed, incl. Integrase, catalytic core, and DNA integration
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6508_Mixed,_incl._Integrase,_catalytic_core,_and_DNA_integration


id: CL:6522
description: Transposase, IS116/IS110/IS902, and Major facilitator superfamily domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6522_Transposase,_IS116/IS110/IS902,_and_Major_facilitator_superfamily_domain


id: CL:6531
description: Transposition, and Integrase, catalytic core
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6531_Transposition,_and_Integrase,_catalytic_core


id: CL:6542
description: Mixed, incl. IstB-like ATP-binding protein, and Putative cyclase
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6542_Mixed,_incl._IstB-like_ATP-binding_protein,_and_Putative_cyclase


id: CL:6544
description: Mixed, incl. L-methylmalonyl-CoA metabolic process, and Armadillo-type fold
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6544_Mixed,_incl._L-methylmalonyl-CoA_metabolic_process,_and_Armadillo-type_fold


id: CL:6558
description: IstB-like ATP-binding protein, and Integrase, catalytic core
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6558_IstB-like_ATP-binding_protein,_and_Integrase,_catalytic_core


id: CL:6567
description: Mixed, incl. Plasmid pRiA4b, Orf3, and Nitrogen fixation
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6567_Mixed,_incl._Plasmid_pRiA4b,_Orf3,_and_Nitrogen_fixation


id: CL:658
description: Mixed, incl. Aminoacyl-tRNA synthetase, class II, and SurA N-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:658_Mixed,_incl._Aminoacyl-tRNA_synthetase,_class_II,_and_SurA_N-terminal_domain


id: CL:6586
description: Mixed, incl. Quorum sensing, and TRAP transporter solute receptor DctP
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6586_Mixed,_incl._Quorum_sensing,_and_TRAP_transporter_solute_receptor_DctP


id: CL:6587
description: Quorum sensing, and NMT1/THI5 like
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6587_Quorum_sensing,_and_NMT1/THI5_like


id: CL:6589
description: Amino acid transport, and Branched-chain amino acid ATP-binding cassette transporter, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6589_Amino_acid_transport,_and_Branched-chain_amino_acid_ATP-binding_cassette_transporter,_C-terminal


id: CL:6591
description: Amino acid transport, and Branched-chain amino acid ATP-binding cassette transporter, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6591_Amino_acid_transport,_and_Branched-chain_amino_acid_ATP-binding_cassette_transporter,_C-terminal


id: CL:6592
description: Branched-chain amino acid transport, and Leucine-binding protein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6592_Branched-chain_amino_acid_transport,_and_Leucine-binding_protein_domain


id: CL:6593
description: Branched-chain amino acid transport, and Leucine-binding protein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6593_Branched-chain_amino_acid_transport,_and_Leucine-binding_protein_domain


id: CL:6594
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6594_Branched-chain_amino_acid_transport,_and_Branched-chain_amino_acid_ATP-binding_cassette_transporter,_C-terminal

description:
  Branched-chain amino acid transport, and Branched-chain amino acid ATP-binding cassette transporter, C-terminal


id: CL:6595
description: Branched-chain amino acid transport, and Periplasmic binding protein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6595_Branched-chain_amino_acid_transport,_and_Periplasmic_binding_protein_domain


id: CL:6596
description: Branched-chain amino acid transport, and Periplasmic binding protein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6596_Branched-chain_amino_acid_transport,_and_Periplasmic_binding_protein_domain


id: CL:6597
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6597_Mixed,_incl._Branched-chain_amino_acid_ATP-binding_cassette_transporter,_and_High-affinity_branched-chain_amino_acid_transport_ATP-binding_protein

description:
  Mixed, incl. Branched-chain amino acid ATP-binding cassette transporter, and High-affinity branched-chain amino acid transport ATP-binding protein


id: CL:6598
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6598_Mixed,_incl._Leu/Ile/Val-binding_protein,_and_Branched-chain_amino_acid_ATP-binding_cassette_transporter

description:
  Mixed, incl. Leu/Ile/Val-binding protein, and Branched-chain amino acid ATP-binding cassette transporter


id: CL:6607
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6607_Mixed,_incl._Branched-chain_amino_acid_ATP-binding_cassette_transporter,_and_ABC_transporter,_BtuC-like

description:
  Mixed, incl. Branched-chain amino acid ATP-binding cassette transporter, and ABC transporter, BtuC-like


id: CL:6616
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6616_Mixed,_incl._Leu/Ile/Val-binding_protein,_and_High-affinity_branched-chain_amino_acid_transport_ATP-binding_protein

description:
  Mixed, incl. Leu/Ile/Val-binding protein, and High-affinity branched-chain amino acid transport ATP-binding protein


id: CL:6625
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6625_Mixed,_incl._Leu/Ile/Val-binding_protein,_and_High-affinity_branched-chain_amino_acid_transport_ATP-binding_protein

description:
  Mixed, incl. Leu/Ile/Val-binding protein, and High-affinity branched-chain amino acid transport ATP-binding protein


id: CL:6634
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6634_Mixed,_incl._Receptor_family_ligand_binding_region,_and_Branched-chain_amino_acid_ATP-binding_cassette_transporter,_C-terminal

description:
  Mixed, incl. Receptor family ligand binding region, and Branched-chain amino acid ATP-binding cassette transporter, C-terminal


id: CL:6643
description: Branched-chain amino acid transport, and Periplasmic binding protein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6643_Branched-chain_amino_acid_transport,_and_Periplasmic_binding_protein_domain


id: CL:6652
description: Branched-chain amino acid transport, and Periplasmic binding protein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6652_Branched-chain_amino_acid_transport,_and_Periplasmic_binding_protein_domain


id: CL:6662
description: Mixed, incl. ANL, N-terminal domain, and Branched-chain amino acid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6662_Mixed,_incl._ANL,_N-terminal_domain,_and_Branched-chain_amino_acid_transport


id: CL:6664
description: Mixed, incl. Periplasmic binding protein, and Long-chain fatty acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6664_Mixed,_incl._Periplasmic_binding_protein,_and_Long-chain_fatty_acid_metabolic_process


id: CL:6676
description: Mixed, incl. Receptor family ligand binding region, and Long-chain fatty acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6676_Mixed,_incl._Receptor_family_ligand_binding_region,_and_Long-chain_fatty_acid_metabolic_process


id: CL:6706
description: Mixed, incl. NMT1/THI5 like, and PQQ biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6706_Mixed,_incl._NMT1/THI5_like,_and_PQQ_biosynthesis


id: CL:6707
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6707_Mixed,_incl._NMT1/THI5_like,_and_Substrate_binding_domain_of_ABC-type_glycine_betaine_transport_system

description:
  Mixed, incl. NMT1/THI5 like, and Substrate binding domain of ABC-type glycine betaine transport system


id: CL:6709
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6709_Mixed,_incl._NMT1/THI5_like,_and_Substrate_binding_domain_of_ABC-type_glycine_betaine_transport_system

description:
  Mixed, incl. NMT1/THI5 like, and Substrate binding domain of ABC-type glycine betaine transport system


id: CL:6711
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6711_Mixed,_incl._Substrate_binding_domain_of_ABC-type_glycine_betaine_transport_system,_and_SsuA/THI5-like

description:
  Mixed, incl. Substrate binding domain of ABC-type glycine betaine transport system, and SsuA/THI5-like


id: CL:6737
description: Mixed, incl. PQQ biosynthesis, and Lactonase, 7-bladed beta-propeller
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6737_Mixed,_incl._PQQ_biosynthesis,_and_Lactonase,_7-bladed_beta-propeller


id: CL:6739
description: Mixed, incl. Cytochrome c, and SsuA/THI5-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6739_Mixed,_incl._Cytochrome_c,_and_SsuA/THI5-like


id: CL:6762
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6762_Mixed,_incl._TRAP_transporter_solute_receptor_DctP,_and_TRAP_transporter_large_membrane_protein_DctM

description:
  Mixed, incl. TRAP transporter solute receptor DctP, and TRAP transporter large membrane protein DctM


id: CL:6764
description: TRAP transporter solute receptor DctP, and TRAP transporter large membrane protein DctM
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6764_TRAP_transporter_solute_receptor_DctP,_and_TRAP_transporter_large_membrane_protein_DctM


id: CL:6766
description: TRAP transporter solute receptor, DctP family, and C4-dicarboxylate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6766_TRAP_transporter_solute_receptor,_DctP_family,_and_C4-dicarboxylate_transport


id: CL:6768
description: TRAP transporter solute receptor, DctP family, and C4-dicarboxylate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6768_TRAP_transporter_solute_receptor,_DctP_family,_and_C4-dicarboxylate_transport


id: CL:679
description: Mixed, incl. Tetratricopeptide repeats, and SNF2, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:679_Mixed,_incl._Tetratricopeptide_repeats,_and_SNF2,_N-terminal


id: CL:6793
description: Tripartite ATP-independent periplasmic transporter complex, and C4-dicarboxylate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6793_Tripartite_ATP-independent_periplasmic_transporter_complex,_and_C4-dicarboxylate_transport


id: CL:680
description: Mixed, incl. Tetratricopeptide repeats, and SNF2, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:680_Mixed,_incl._Tetratricopeptide_repeats,_and_SNF2,_N-terminal


id: CL:6816
description: Mixed, incl. Histidine metabolism, and Regulation of cell growth
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6816_Mixed,_incl._Histidine_metabolism,_and_Regulation_of_cell_growth


id: CL:682
description: Tetratricopeptide repeats, and Adaptive Immune System
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:682_Tetratricopeptide_repeats,_and_Adaptive_Immune_System


id: CL:6832
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6832_Mixed,_incl._SH3-like_domain,_bacterial-type,_and_Nucleotidyl_transferase_AbiEii_toxin,_Type_IV_TA_system

description:
  Mixed, incl. SH3-like domain, bacterial-type, and Nucleotidyl transferase AbiEii toxin, Type IV TA system


id: CL:6833
description: Mixed, incl. SH3-like domain, bacterial-type, and L-methylmalonyl-CoA metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6833_Mixed,_incl._SH3-like_domain,_bacterial-type,_and_L-methylmalonyl-CoA_metabolic_process


id: CL:6842
description: Mixed, incl. Nucleotidyl transferase AbiEii toxin, Type IV TA system
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6842_Mixed,_incl._Nucleotidyl_transferase_AbiEii_toxin,_Type_IV_TA_system


id: CL:6857
description: Peptidase M23, and Transmembrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6857_Peptidase_M23,_and_Transmembrane


id: CL:6868
description: Mixed, incl. Zinc ion binding, and Peptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6868_Mixed,_incl._Zinc_ion_binding,_and_Peptidase_activity


id: CL:6888
description: Mixed, incl. Bordetella uptake gene, and Protein of unknown function DUF1468
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6888_Mixed,_incl._Bordetella_uptake_gene,_and_Protein_of_unknown_function_DUF1468


id: CL:6890
description: Bordetella uptake gene, and Protein of unknown function DUF112, transmembrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6890_Bordetella_uptake_gene,_and_Protein_of_unknown_function_DUF112,_transmembrane


id: CL:6893
description: Bordetella uptake gene, and Protein of unknown function DUF112, transmembrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6893_Bordetella_uptake_gene,_and_Protein_of_unknown_function_DUF112,_transmembrane


id: CL:6920
description: Mixed, incl. L-rhamnonate dehydratase-like, and UxaA/GarD, SAF domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6920_Mixed,_incl._L-rhamnonate_dehydratase-like,_and_UxaA/GarD,_SAF_domain


id: CL:6922
description: Mixed, incl. Bordetella uptake gene, and Protein of unknown function DUF1468
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6922_Mixed,_incl._Bordetella_uptake_gene,_and_Protein_of_unknown_function_DUF1468


id: CL:6950
description: Mostly uncharacterized, incl. YHS domain, and HDIG domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6950_Mostly_uncharacterized,_incl._YHS_domain,_and_HDIG_domain


id: CL:6964
description: Mixed, incl. HDIG domain, and Homeobox-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6964_Mixed,_incl._HDIG_domain,_and_Homeobox-like_domain_superfamily


id: CL:6979
description: Mixed, incl. Lamin Tail Domain, and Nucleoside monophosphate catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6979_Mixed,_incl._Lamin_Tail_Domain,_and_Nucleoside_monophosphate_catabolic_process


id: CL:6989
description: Mixed, incl. Nucleoside monophosphate catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6989_Mixed,_incl._Nucleoside_monophosphate_catabolic_process


id: CL:6998
description: Mixed, incl. PIN domain, and DNA strand exchange activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:6998_Mixed,_incl._PIN_domain,_and_DNA_strand_exchange_activity


id: CL:7000
description: Regulation of growth, and DNA strand exchange activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:7000_Regulation_of_growth,_and_DNA_strand_exchange_activity


id: CL:7017
description: Mixed, incl. Domain of unknown function DUF927, and AsnC-type HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:7017_Mixed,_incl._Domain_of_unknown_function_DUF927,_and_AsnC-type_HTH_domain


id: CL:7019
description: Mixed, incl. Domain of unknown function DUF927, and Helix-turn-helix domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:7019_Mixed,_incl._Domain_of_unknown_function_DUF927,_and_Helix-turn-helix_domain


id: CL:7032
description: Mixed, incl. AsnC-type HTH domain, and ABC transporter, permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:7032_Mixed,_incl._AsnC-type_HTH_domain,_and_ABC_transporter,_permease


id: CL:707
description: Mixed, incl. Zinc finger, SWIM-type, and ArgE/DapE/ACY1/CPG2/YscS, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:707_Mixed,_incl._Zinc_finger,_SWIM-type,_and_ArgE/DapE/ACY1/CPG2/YscS,_conserved_site


id: CL:716
description: Mixed, incl. DNA catabolic process, and Polyprenyl synthetase
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:716_Mixed,_incl._DNA_catabolic_process,_and_Polyprenyl_synthetase


id: CL:718
description: DNA catabolic process, and Polyprenyl synthetase
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:718_DNA_catabolic_process,_and_Polyprenyl_synthetase


id: CL:737
description: Regulation of cell shape, and Cell cycle
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:737_Regulation_of_cell_shape,_and_Cell_cycle


id: CL:738
description: Regulation of cell shape, and Penicillin-binding protein, transpeptidase
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:738_Regulation_of_cell_shape,_and_Penicillin-binding_protein,_transpeptidase


id: CL:739
description: Peptidoglycan biosynthesis, and Lipid-linked peptidoglycan transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:739_Peptidoglycan_biosynthesis,_and_Lipid-linked_peptidoglycan_transporter_activity


id: CL:740
description: Peptidoglycan biosynthesis, and Septum formation initiator
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:740_Peptidoglycan_biosynthesis,_and_Septum_formation_initiator


id: CL:741
description: Cell shape, and Septum formation initiator
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:741_Cell_shape,_and_Septum_formation_initiator


id: CL:746
description: MurE/MurF, N-terminal, and Vancomycin resistance
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:746_MurE/MurF,_N-terminal,_and_Vancomycin_resistance


id: CL:760
description: UDP-N-acetylgalactosamine metabolic process, and Peptidoglycan synthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:760_UDP-N-acetylgalactosamine_metabolic_process,_and_Peptidoglycan_synthesis


id: CL:780
description: Serine-type exopeptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:780_Serine-type_exopeptidase_activity


id: CL:791
description: Mixed, incl. PASTA domain, and Protein dephosphorylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:791_Mixed,_incl._PASTA_domain,_and_Protein_dephosphorylation


id: CL:806
description: Mixed, incl. Cell morphogenesis, and Regulation of cell cycle
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:806_Mixed,_incl._Cell_morphogenesis,_and_Regulation_of_cell_cycle


id: CL:808
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:808_Mixed,_incl._Cell_shape_determining_protein_MreB,_and_Penicillin-binding_Protein_dimerisation_domain

description:
  Mixed, incl. Cell shape determining protein MreB, and Penicillin-binding Protein dimerisation domain


id: CL:835
description: Septation, and Alanine racemase, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:835_Septation,_and_Alanine_racemase,_N-terminal


id: CL:848
description: Peptidase S26, and Tail specific protease
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:848_Peptidase_S26,_and_Tail_specific_protease


id: CL:858
description: Carbon metabolism, and Valine, leucine and isoleucine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:858_Carbon_metabolism,_and_Valine,_leucine_and_isoleucine_biosynthesis


id: CL:859
description: Carbon metabolism, and Valine, leucine and isoleucine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:859_Carbon_metabolism,_and_Valine,_leucine_and_isoleucine_biosynthesis


id: CL:861
description: Citrate cycle (TCA cycle), and Valine, leucine and isoleucine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:861_Citrate_cycle_(TCA_cycle),_and_Valine,_leucine_and_isoleucine_biosynthesis


id: CL:862
description: Citrate cycle (TCA cycle), and Valine, leucine and isoleucine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:862_Citrate_cycle_(TCA_cycle),_and_Valine,_leucine_and_isoleucine_biosynthesis


id: CL:863
description: Citrate cycle (TCA cycle), and Valine, leucine and isoleucine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:863_Citrate_cycle_(TCA_cycle),_and_Valine,_leucine_and_isoleucine_biosynthesis


id: CL:864
description: Valine, leucine and isoleucine biosynthesis, and Citrate cycle (TCA cycle)
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:864_Valine,_leucine_and_isoleucine_biosynthesis,_and_Citrate_cycle_(TCA_cycle)


id: CL:867
description: Pyruvate:ferredoxin oxidoreductase core domain II, and Oxalate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:867_Pyruvate:ferredoxin_oxidoreductase_core_domain_II,_and_Oxalate_metabolic_process


id: CL:870
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:870_2-oxoacid:acceptor_oxidoreductase,_beta_subunit,_and_2-oxoacid:acceptor_oxidoreductase,_alpha_subunit

description:
  2-oxoacid:acceptor oxidoreductase, beta subunit, and 2-oxoacid:acceptor oxidoreductase, alpha subunit


id: CL:891
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:891_Mixed,_incl._2-oxoacid:acceptor_oxidoreductase,_gamma_subunit,_pyruvate/2-ketoisovalerate,_and_4Fe-4S_binding_domain

description:
  Mixed, incl. 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate, and 4Fe-4S binding domain


id: CL:900
description: Valine, leucine and isoleucine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:900_Valine,_leucine_and_isoleucine_biosynthesis


id: CL:918
description: Thiamine pyrophosphate enzyme, and Valine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:918_Thiamine_pyrophosphate_enzyme,_and_Valine_metabolic_process


id: CL:928
description: Tricarboxylic acid cycle, and Tricarboxylic acid cycle
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:928_Tricarboxylic_acid_cycle,_and_Tricarboxylic_acid_cycle


id: CL:930
description: Mixed, incl. Fumarate hydratase activity, and Citrate synthase
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:930_Mixed,_incl._Fumarate_hydratase_activity,_and_Citrate_synthase


id: CL:959
description: Acetyl-coenzyme A synthetase N-terminus, and Taurine and hypotaurine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:959_Acetyl-coenzyme_A_synthetase_N-terminus,_and_Taurine_and_hypotaurine_metabolism


id: CL:979
description: Mixed, incl. Lipoic acid metabolism, and Butyrate kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:979_Mixed,_incl._Lipoic_acid_metabolism,_and_Butyrate_kinase


id: CL:981
description: Mixed, incl. e3 binding domain, and Dehydrogenase, E1 component
name:
  Local Network Cluster (STRING).STRING_v12.0_1555112_STRINGid_CL:981_Mixed,_incl._e3_binding_domain,_and_Dehydrogenase,_E1_component


id: GO:0000716
description: Transcription-coupled nucleotide-excision repair, DNA damage recognition
memo: https://amigo.geneontology.org/amigo/term/GO:0000716
golevel: 7
name:
  GOBP.STRING_v12.0_1555112_STRINGid_GO:0000716_Transcription-coupled_nucleotide-excision_repair,_DNA_damage_recognition


id: GO:0000724
description: Double-strand break repair via homologous recombination
memo: https://amigo.geneontology.org/amigo/term/GO:0000724
golevel: 7
name:
  GOBP.STRING_v12.0_1555112_STRINGid_GO:0000724_Double-strand_break_repair_via_homologous_recombination


id: GO:0001073
description: Transcription antitermination factor activity, DNA binding
memo: https://amigo.geneontology.org/amigo/term/GO:0001073
golevel: 2
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0001073_Transcription_antitermination_factor_activity,_DNA_binding


id: GO:0003848
description: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003848
golevel: 5
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0003848_2-amino-4-hydroxy-6-hydroxymethyldihydropteridine_diphosphokinase_activity


id: GO:0003871
description: 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003871
golevel: 6
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0003871_5-methyltetrahydropteroyltriglutamate-homocysteine_S-methyltransferase_activity


id: GO:0003906
description: DNA-(apurinic or apyrimidinic site) endonuclease activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003906
golevel: 6
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0003906_DNA-(apurinic_or_apyrimidinic_site)_endonuclease_activity


id: GO:0003908
description: methylated-DNA-[protein]-cysteine S-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003908
golevel: 4
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0003908_methylated-DNA-[protein]-cysteine_S-methyltransferase_activity


id: GO:0003917
description: DNA topoisomerase type I (single strand cut, ATP-independent) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003917
golevel: 5
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0003917_DNA_topoisomerase_type_I_(single_strand_cut,_ATP-independent)_activity


id: GO:0003918
description: DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003918
golevel: 3
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0003918_DNA_topoisomerase_type_II_(double_strand_cut,_ATP-hydrolyzing)_activity


id: GO:0003949
memo: https://amigo.geneontology.org/amigo/term/GO:0003949
golevel: 5
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0003949_1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide_isomerase_activity

description:
  1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity


id: GO:0004015
description: adenosylmethionine-8-amino-7-oxononanoate transaminase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004015
golevel: 5
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0004015_adenosylmethionine-8-amino-7-oxononanoate_transaminase_activity


id: GO:0004018
description: N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004018
golevel: 5
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0004018_N6-(1,2-dicarboxyethyl)AMP_AMP-lyase_(fumarate-forming)_activity


id: GO:0004088
description: Carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004088
golevel: 5
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0004088_Carbamoyl-phosphate_synthase_(glutamine-hydrolyzing)_activity


id: GO:0004317
description: 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004317
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0004317_3-hydroxypalmitoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0004318
description: Enoyl-[acyl-carrier-protein] reductase (NADH) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004318
golevel: 6
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0004318_Enoyl-[acyl-carrier-protein]_reductase_(NADH)_activity


id: GO:0004360
description: glutamine-fructose-6-phosphate transaminase (isomerizing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004360
golevel: 6
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0004360_glutamine-fructose-6-phosphate_transaminase_(isomerizing)_activity


id: GO:0004471
description: Malate dehydrogenase (decarboxylating) (NAD+) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004471
golevel: 5
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0004471_Malate_dehydrogenase_(decarboxylating)_(NAD+)_activity


id: GO:0004486
description: Methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004486
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0004486_Methylenetetrahydrofolate_dehydrogenase_[NAD(P)+]_activity


id: GO:0004488
description: Methylenetetrahydrofolate dehydrogenase (NADP+) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004488
golevel: 5
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0004488_Methylenetetrahydrofolate_dehydrogenase_(NADP+)_activity


id: GO:0004489
description: Methylenetetrahydrofolate reductase (NAD(P)H) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004489
golevel: 5
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0004489_Methylenetetrahydrofolate_reductase_(NAD(P)H)_activity


id: GO:0004514
description: Nicotinate-nucleotide diphosphorylase (carboxylating) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004514
golevel: 5
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0004514_Nicotinate-nucleotide_diphosphorylase_(carboxylating)_activity


id: GO:0004604
description: Phosphoadenylyl-sulfate reductase (thioredoxin) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004604
golevel: 5
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0004604_Phosphoadenylyl-sulfate_reductase_(thioredoxin)_activity


id: GO:0004639
description: Phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004639
golevel: 5
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0004639_Phosphoribosylaminoimidazolesuccinocarboxamide_synthase_activity


id: GO:0004641
description: Phosphoribosylformylglycinamidine cyclo-ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004641
golevel: 5
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0004641_Phosphoribosylformylglycinamidine_cyclo-ligase_activity


id: GO:0004643
description: Phosphoribosylaminoimidazolecarboxamide formyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004643
golevel: 5
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0004643_Phosphoribosylaminoimidazolecarboxamide_formyltransferase_activity


id: GO:0004715
description: Non-membrane spanning protein tyrosine kinase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004715
golevel: 5
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0004715_Non-membrane_spanning_protein_tyrosine_kinase_activity


id: GO:0004719
description: protein-L-isoaspartate (D-aspartate) O-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004719
golevel: 5
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0004719_protein-L-isoaspartate_(D-aspartate)_O-methyltransferase_activity


id: GO:0004748
description: Ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0004748
golevel: 6
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0004748_Ribonucleoside-diphosphate_reductase_activity,_thioredoxin_disulfide_as_acceptor


id: GO:0005315
description: Inorganic phosphate transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0005315
golevel: 5
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0005315_Inorganic_phosphate_transmembrane_transporter_activity


id: GO:0005477
description: Pyruvate secondary active transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0005477
golevel: 6
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0005477_Pyruvate_secondary_active_transmembrane_transporter_activity


id: GO:0006303
description: Double-strand break repair via nonhomologous end joining
memo: https://amigo.geneontology.org/amigo/term/GO:0006303
golevel: 7
name:
  GOBP.STRING_v12.0_1555112_STRINGid_GO:0006303_Double-strand_break_repair_via_nonhomologous_end_joining


id: GO:0006614
description: SRP-dependent cotranslational protein targeting to membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0006614
golevel: 6
name:
  GOBP.STRING_v12.0_1555112_STRINGid_GO:0006614_SRP-dependent_cotranslational_protein_targeting_to_membrane


id: GO:0007156
description: Homophilic cell adhesion via plasma membrane adhesion molecules
memo: https://amigo.geneontology.org/amigo/term/GO:0007156
golevel: 4
name:
  GOBP.STRING_v12.0_1555112_STRINGid_GO:0007156_Homophilic_cell_adhesion_via_plasma_membrane_adhesion_molecules


id: GO:0008028
description: Monocarboxylic acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008028
golevel: 4
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0008028_Monocarboxylic_acid_transmembrane_transporter_activity


id: GO:0008271
description: Secondary active sulfate transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008271
golevel: 5
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0008271_Secondary_active_sulfate_transmembrane_transporter_activity


id: GO:0008444
description: CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008444
golevel: 6
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0008444_CDP-diacylglycerol-glycerol-3-phosphate_3-phosphatidyltransferase_activity


id: GO:0008534
description: Oxidized purine nucleobase lesion DNA N-glycosylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008534
golevel: 6
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0008534_Oxidized_purine_nucleobase_lesion_DNA_N-glycosylase_activity


id: GO:0008659
description: (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008659
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0008659_(3R)-hydroxymyristoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0008685
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008685
golevel: 4
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0008685_2-C-methyl-D-erythritol_2,4-cyclodiphosphate_synthase_activity


id: GO:0008686
description: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008686
golevel: 4
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0008686_3,4-dihydroxy-2-butanone-4-phosphate_synthase_activity


id: GO:0008693
description: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008693
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0008693_3-hydroxydecanoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0008703
description: 5-amino-6-(5-phosphoribosylamino)uracil reductase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008703
golevel: 5
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0008703_5-amino-6-(5-phosphoribosylamino)uracil_reductase_activity


id: GO:0008757
description: S-adenosylmethionine-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008757
golevel: 5
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0008757_S-adenosylmethionine-dependent_methyltransferase_activity


id: GO:0008759
description: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008759
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0008759_UDP-3-O-[3-hydroxymyristoyl]_N-acetylglucosamine_deacetylase_activity


id: GO:0008760
description: UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008760
golevel: 4
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0008760_UDP-N-acetylglucosamine_1-carboxyvinyltransferase_activity


id: GO:0008764
description: UDP-N-acetylmuramoylalanine-D-glutamate ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008764
golevel: 5
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0008764_UDP-N-acetylmuramoylalanine-D-glutamate_ligase_activity


id: GO:0008766
description: UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008766
golevel: 5
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0008766_UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine_ligase_activity


id: GO:0008780
description: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008780
golevel: 6
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0008780_acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine_O-acyltransferase_activity


id: GO:0008817
description: cob(I)yrinic acid a,c-diamide adenosyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008817
golevel: 4
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0008817_cob(I)yrinic_acid_a,c-diamide_adenosyltransferase_activity


id: GO:0008835
description: Diaminohydroxyphosphoribosylaminopyrimidine deaminase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008835
golevel: 5
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0008835_Diaminohydroxyphosphoribosylaminopyrimidine_deaminase_activity


id: GO:0008939
description: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008939
golevel: 5
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0008939_Nicotinate-nucleotide-dimethylbenzimidazole_phosphoribosyltransferase_activity


id: GO:0008961
description: Phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008961
golevel: 3
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0008961_Phosphatidylglycerol-prolipoprotein_diacylglyceryl_transferase_activity


id: GO:0008963
description: phospho-N-acetylmuramoyl-pentapeptide-transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008963
golevel: 5
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0008963_phospho-N-acetylmuramoyl-pentapeptide-transferase_activity


id: GO:0009007
description: Site-specific DNA-methyltransferase (adenine-specific) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0009007
golevel: 5
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0009007_Site-specific_DNA-methyltransferase_(adenine-specific)_activity


id: GO:0009095
description: Aromatic amino acid family biosynthetic process, prephenate pathway
memo: https://amigo.geneontology.org/amigo/term/GO:0009095
golevel: 7
name:
  GOBP.STRING_v12.0_1555112_STRINGid_GO:0009095_Aromatic_amino_acid_family_biosynthetic_process,_prephenate_pathway


id: GO:0009130
description: Pyrimidine nucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009130
golevel: 7
name:
  GOBP.STRING_v12.0_1555112_STRINGid_GO:0009130_Pyrimidine_nucleoside_monophosphate_biosynthetic_process


id: GO:0009139
description: Pyrimidine nucleoside diphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009139
golevel: 7
name:
  GOBP.STRING_v12.0_1555112_STRINGid_GO:0009139_Pyrimidine_nucleoside_diphosphate_biosynthetic_process


id: GO:0009148
description: Pyrimidine nucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009148
golevel: 7
name:
  GOBP.STRING_v12.0_1555112_STRINGid_GO:0009148_Pyrimidine_nucleoside_triphosphate_biosynthetic_process


id: GO:0009157
description: Deoxyribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009157
golevel: 7
name:
  GOBP.STRING_v12.0_1555112_STRINGid_GO:0009157_Deoxyribonucleoside_monophosphate_biosynthetic_process


id: GO:0009168
description: Purine ribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009168
golevel: 8
name:
  GOBP.STRING_v12.0_1555112_STRINGid_GO:0009168_Purine_ribonucleoside_monophosphate_biosynthetic_process


id: GO:0009173
description: Pyrimidine ribonucleoside monophosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009173
golevel: 8
name:
  GOBP.STRING_v12.0_1555112_STRINGid_GO:0009173_Pyrimidine_ribonucleoside_monophosphate_metabolic_process


id: GO:0009174
description: Pyrimidine ribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009174
golevel: 8
name:
  GOBP.STRING_v12.0_1555112_STRINGid_GO:0009174_Pyrimidine_ribonucleoside_monophosphate_biosynthetic_process


id: GO:0009175
description: Pyrimidine ribonucleoside monophosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009175
golevel: 8
name:
  GOBP.STRING_v12.0_1555112_STRINGid_GO:0009175_Pyrimidine_ribonucleoside_monophosphate_catabolic_process


id: GO:0009176
description: Pyrimidine deoxyribonucleoside monophosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009176
golevel: 8
name:
  GOBP.STRING_v12.0_1555112_STRINGid_GO:0009176_Pyrimidine_deoxyribonucleoside_monophosphate_metabolic_process


id: GO:0009177
description: Pyrimidine deoxyribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009177
golevel: 8
name:
  GOBP.STRING_v12.0_1555112_STRINGid_GO:0009177_Pyrimidine_deoxyribonucleoside_monophosphate_biosynthetic_process


id: GO:0009196
description: Pyrimidine deoxyribonucleoside diphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009196
golevel: 8
name:
  GOBP.STRING_v12.0_1555112_STRINGid_GO:0009196_Pyrimidine_deoxyribonucleoside_diphosphate_metabolic_process


id: GO:0009197
description: Pyrimidine deoxyribonucleoside diphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009197
golevel: 8
name:
  GOBP.STRING_v12.0_1555112_STRINGid_GO:0009197_Pyrimidine_deoxyribonucleoside_diphosphate_biosynthetic_process


id: GO:0009206
description: Purine ribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009206
golevel: 8
name:
  GOBP.STRING_v12.0_1555112_STRINGid_GO:0009206_Purine_ribonucleoside_triphosphate_biosynthetic_process


id: GO:0009208
description: Pyrimidine ribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009208
golevel: 8
name:
  GOBP.STRING_v12.0_1555112_STRINGid_GO:0009208_Pyrimidine_ribonucleoside_triphosphate_metabolic_process


id: GO:0009209
description: Pyrimidine ribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009209
golevel: 8
name:
  GOBP.STRING_v12.0_1555112_STRINGid_GO:0009209_Pyrimidine_ribonucleoside_triphosphate_biosynthetic_process


id: GO:0009210
description: Pyrimidine ribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009210
golevel: 8
name:
  GOBP.STRING_v12.0_1555112_STRINGid_GO:0009210_Pyrimidine_ribonucleoside_triphosphate_catabolic_process


id: GO:0009211
description: Pyrimidine deoxyribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009211
golevel: 8
name:
  GOBP.STRING_v12.0_1555112_STRINGid_GO:0009211_Pyrimidine_deoxyribonucleoside_triphosphate_metabolic_process


id: GO:0009212
description: Pyrimidine deoxyribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009212
golevel: 8
name:
  GOBP.STRING_v12.0_1555112_STRINGid_GO:0009212_Pyrimidine_deoxyribonucleoside_triphosphate_biosynthetic_process


id: GO:0009213
description: Pyrimidine deoxyribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009213
golevel: 8
name:
  GOBP.STRING_v12.0_1555112_STRINGid_GO:0009213_Pyrimidine_deoxyribonucleoside_triphosphate_catabolic_process


id: GO:0009215
description: Purine deoxyribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009215
golevel: 8
name:
  GOBP.STRING_v12.0_1555112_STRINGid_GO:0009215_Purine_deoxyribonucleoside_triphosphate_metabolic_process


id: GO:0009217
description: Purine deoxyribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009217
golevel: 8
name:
  GOBP.STRING_v12.0_1555112_STRINGid_GO:0009217_Purine_deoxyribonucleoside_triphosphate_catabolic_process


id: GO:0009427
description: Bacterial-type flagellum basal body, distal rod, L ring
memo: https://amigo.geneontology.org/amigo/term/GO:0009427
golevel: 2
name:
  GOCC.STRING_v12.0_1555112_STRINGid_GO:0009427_Bacterial-type_flagellum_basal_body,_distal_rod,_L_ring


id: GO:0009428
description: Bacterial-type flagellum basal body, distal rod, P ring
memo: https://amigo.geneontology.org/amigo/term/GO:0009428
golevel: 2
name:
  GOCC.STRING_v12.0_1555112_STRINGid_GO:0009428_Bacterial-type_flagellum_basal_body,_distal_rod,_P_ring


id: GO:0009678
description: Pyrophosphate hydrolysis-driven proton transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0009678
golevel: 5
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0009678_Pyrophosphate_hydrolysis-driven_proton_transmembrane_transporter_activity


id: GO:0010557
description: Positive regulation of macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010557
golevel: 7
name:
  GOBP.STRING_v12.0_1555112_STRINGid_GO:0010557_Positive_regulation_of_macromolecule_biosynthetic_process


id: GO:0010558
description: Negative regulation of macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010558
golevel: 7
name:
  GOBP.STRING_v12.0_1555112_STRINGid_GO:0010558_Negative_regulation_of_macromolecule_biosynthetic_process


id: GO:0010604
description: Positive regulation of macromolecule metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010604
golevel: 6
name:
  GOBP.STRING_v12.0_1555112_STRINGid_GO:0010604_Positive_regulation_of_macromolecule_metabolic_process


id: GO:0010605
description: Negative regulation of macromolecule metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010605
golevel: 6
name:
  GOBP.STRING_v12.0_1555112_STRINGid_GO:0010605_Negative_regulation_of_macromolecule_metabolic_process


id: GO:0015318
description: Inorganic molecular entity transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015318
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0015318_Inorganic_molecular_entity_transmembrane_transporter_activity


id: GO:0015355
description: Secondary active monocarboxylate transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015355
golevel: 5
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0015355_Secondary_active_monocarboxylate_transmembrane_transporter_activity


id: GO:0015415
description: ATPase-coupled phosphate ion transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015415
golevel: 3
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0015415_ATPase-coupled_phosphate_ion_transmembrane_transporter_activity


id: GO:0015453
description: Oxidoreduction-driven active transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015453
golevel: 5
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0015453_Oxidoreduction-driven_active_transmembrane_transporter_activity


id: GO:0015651
description: Quaternary ammonium group transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015651
golevel: 3
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0015651_Quaternary_ammonium_group_transmembrane_transporter_activity


id: GO:0015658
description: Branched-chain amino acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015658
golevel: 4
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0015658_Branched-chain_amino_acid_transmembrane_transporter_activity


id: GO:0015975
description: Energy derivation by oxidation of reduced inorganic compounds
memo: https://amigo.geneontology.org/amigo/term/GO:0015975
golevel: 4
name:
  GOBP.STRING_v12.0_1555112_STRINGid_GO:0015975_Energy_derivation_by_oxidation_of_reduced_inorganic_compounds


id: GO:0015988
description: Energy coupled proton transmembrane transport, against electrochemical gradient
memo: https://amigo.geneontology.org/amigo/term/GO:0015988
golevel: 6
name:
  GOBP.STRING_v12.0_1555112_STRINGid_GO:0015988_Energy_coupled_proton_transmembrane_transport,_against_electrochemical_gradient


id: GO:0016614
description: Oxidoreductase activity, acting on CH-OH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016614
golevel: 3
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0016614_Oxidoreductase_activity,_acting_on_CH-OH_group_of_donors


id: GO:0016616
description: Oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016616
golevel: 4
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0016616_Oxidoreductase_activity,_acting_on_the_CH-OH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016620
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016620
golevel: 4
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0016620_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016624
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016624
golevel: 4
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0016624_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_disulfide_as_acceptor


id: GO:0016627
description: Oxidoreductase activity, acting on the CH-CH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016627
golevel: 3
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0016627_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors


id: GO:0016628
description: Oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016628
golevel: 4
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0016628_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016634
description: Oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016634
golevel: 4
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0016634_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_oxygen_as_acceptor


id: GO:0016635
memo: https://amigo.geneontology.org/amigo/term/GO:0016635
golevel: 4
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0016635_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_quinone_or_related_compound_as_acceptor

description:
  Oxidoreductase activity, acting on the CH-CH group of donors, quinone or related compound as acceptor


id: GO:0016638
description: Oxidoreductase activity, acting on the CH-NH2 group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016638
golevel: 3
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0016638_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors


id: GO:0016639
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016639
golevel: 4
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0016639_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016642
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016642
golevel: 4
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0016642_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_disulfide_as_acceptor


id: GO:0016645
description: Oxidoreductase activity, acting on the CH-NH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016645
golevel: 3
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0016645_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors


id: GO:0016646
description: Oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016646
golevel: 4
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0016646_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016653
description: Oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016653
golevel: 4
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0016653_Oxidoreductase_activity,_acting_on_NAD(P)H,_heme_protein_as_acceptor


id: GO:0016655
description: Oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016655
golevel: 4
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0016655_Oxidoreductase_activity,_acting_on_NAD(P)H,_quinone_or_similar_compound_as_acceptor


id: GO:0016661
description: Oxidoreductase activity, acting on other nitrogenous compounds as donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016661
golevel: 3
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0016661_Oxidoreductase_activity,_acting_on_other_nitrogenous_compounds_as_donors


id: GO:0016667
description: Oxidoreductase activity, acting on a sulfur group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016667
golevel: 3
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0016667_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors


id: GO:0016668
description: Oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016668
golevel: 4
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0016668_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_NAD(P)_as_acceptor


id: GO:0016670
description: Oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016670
golevel: 4
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0016670_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_oxygen_as_acceptor


id: GO:0016671
description: Oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016671
golevel: 4
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0016671_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_disulfide_as_acceptor


id: GO:0016672
memo: https://amigo.geneontology.org/amigo/term/GO:0016672
golevel: 4
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0016672_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_quinone_or_similar_compound_as_acceptor

description:
  Oxidoreductase activity, acting on a sulfur group of donors, quinone or similar compound as acceptor


id: GO:0016675
description: Oxidoreductase activity, acting on a heme group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016675
golevel: 3
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0016675_Oxidoreductase_activity,_acting_on_a_heme_group_of_donors


id: GO:0016679
description: Oxidoreductase activity, acting on diphenols and related substances as donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016679
golevel: 3
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0016679_Oxidoreductase_activity,_acting_on_diphenols_and_related_substances_as_donors


id: GO:0016684
description: Oxidoreductase activity, acting on peroxide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016684
golevel: 3
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0016684_Oxidoreductase_activity,_acting_on_peroxide_as_acceptor


id: GO:0016699
description: Oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016699
golevel: 4
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0016699_Oxidoreductase_activity,_acting_on_hydrogen_as_donor,_iron-sulfur_protein_as_acceptor


id: GO:0016705
memo: https://amigo.geneontology.org/amigo/term/GO:0016705
golevel: 3
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0016705_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen


id: GO:0016712
memo: https://amigo.geneontology.org/amigo/term/GO:0016712
golevel: 4
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0016712_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen,_reduced_flavin_or_flavoprotein_as_one_donor,_and_incorporation_of_one_atom_of_oxygen

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen


id: GO:0016721
description: Oxidoreductase activity, acting on superoxide radicals as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016721
golevel: 3
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0016721_Oxidoreductase_activity,_acting_on_superoxide_radicals_as_acceptor


id: GO:0016726
description: Oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016726
golevel: 4
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0016726_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_NAD_or_NADP_as_acceptor


id: GO:0016728
description: Oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016728
golevel: 4
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0016728_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_disulfide_as_acceptor


id: GO:0016730
description: Oxidoreductase activity, acting on iron-sulfur proteins as donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016730
golevel: 3
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0016730_Oxidoreductase_activity,_acting_on_iron-sulfur_proteins_as_donors


id: GO:0016731
description: Oxidoreductase activity, acting on iron-sulfur proteins as donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016731
golevel: 4
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0016731_Oxidoreductase_activity,_acting_on_iron-sulfur_proteins_as_donors,_NAD_or_NADP_as_acceptor


id: GO:0016742
description: Hydroxymethyl-, formyl- and related transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0016742
golevel: 4
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0016742_Hydroxymethyl-,_formyl-_and_related_transferase_activity


id: GO:0016747
description: Acyltransferase activity, transferring groups other than amino-acyl groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016747
golevel: 4
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0016747_Acyltransferase_activity,_transferring_groups_other_than_amino-acyl_groups


id: GO:0016765
description: Transferase activity, transferring alkyl or aryl (other than methyl) groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016765
golevel: 3
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0016765_Transferase_activity,_transferring_alkyl_or_aryl_(other_than_methyl)_groups


id: GO:0016772
description: Transferase activity, transferring phosphorus-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016772
golevel: 3
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0016772_Transferase_activity,_transferring_phosphorus-containing_groups


id: GO:0016773
description: Phosphotransferase activity, alcohol group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016773
golevel: 4
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0016773_Phosphotransferase_activity,_alcohol_group_as_acceptor


id: GO:0016774
description: Phosphotransferase activity, carboxyl group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016774
golevel: 4
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0016774_Phosphotransferase_activity,_carboxyl_group_as_acceptor


id: GO:0016775
description: Phosphotransferase activity, nitrogenous group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016775
golevel: 4
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0016775_Phosphotransferase_activity,_nitrogenous_group_as_acceptor


id: GO:0016776
description: Phosphotransferase activity, phosphate group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016776
golevel: 4
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0016776_Phosphotransferase_activity,_phosphate_group_as_acceptor


id: GO:0016780
description: Phosphotransferase activity, for other substituted phosphate groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016780
golevel: 4
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0016780_Phosphotransferase_activity,_for_other_substituted_phosphate_groups


id: GO:0016782
description: Transferase activity, transferring sulphur-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016782
golevel: 3
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0016782_Transferase_activity,_transferring_sulphur-containing_groups


id: GO:0016796
memo: https://amigo.geneontology.org/amigo/term/GO:0016796
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0016796_Exonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_5-phosphomonoesters

description:
  Exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5-phosphomonoesters


id: GO:0016810
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
memo: https://amigo.geneontology.org/amigo/term/GO:0016810
golevel: 3
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0016810_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds


id: GO:0016811
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
memo: https://amigo.geneontology.org/amigo/term/GO:0016811
golevel: 4
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0016811_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_linear_amides


id: GO:0016812
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
memo: https://amigo.geneontology.org/amigo/term/GO:0016812
golevel: 4
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0016812_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_cyclic_amides


id: GO:0016813
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines
memo: https://amigo.geneontology.org/amigo/term/GO:0016813
golevel: 4
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0016813_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_linear_amidines


id: GO:0016814
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines
memo: https://amigo.geneontology.org/amigo/term/GO:0016814
golevel: 4
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0016814_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_cyclic_amidines


id: GO:0016818
description: Hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
memo: https://amigo.geneontology.org/amigo/term/GO:0016818
golevel: 4
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0016818_Hydrolase_activity,_acting_on_acid_anhydrides,_in_phosphorus-containing_anhydrides


id: GO:0016855
description: Racemase and epimerase activity, acting on amino acids and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0016855
golevel: 4
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0016855_Racemase_and_epimerase_activity,_acting_on_amino_acids_and_derivatives


id: GO:0016857
description: Racemase and epimerase activity, acting on carbohydrates and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0016857
golevel: 4
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0016857_Racemase_and_epimerase_activity,_acting_on_carbohydrates_and_derivatives


id: GO:0016861
description: Intramolecular oxidoreductase activity, interconverting aldoses and ketoses
memo: https://amigo.geneontology.org/amigo/term/GO:0016861
golevel: 4
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0016861_Intramolecular_oxidoreductase_activity,_interconverting_aldoses_and_ketoses


id: GO:0016862
description: Intramolecular oxidoreductase activity, interconverting keto- and enol-groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016862
golevel: 4
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0016862_Intramolecular_oxidoreductase_activity,_interconverting_keto-_and_enol-groups


id: GO:0016868
description: Intramolecular transferase activity, phosphotransferases
memo: https://amigo.geneontology.org/amigo/term/GO:0016868
golevel: 4
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0016868_Intramolecular_transferase_activity,_phosphotransferases


id: GO:0016869
description: Intramolecular transferase activity, transferring amino groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016869
golevel: 4
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0016869_Intramolecular_transferase_activity,_transferring_amino_groups


id: GO:0016884
description: Carbon-nitrogen ligase activity, with glutamine as amido-N-donor
memo: https://amigo.geneontology.org/amigo/term/GO:0016884
golevel: 4
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0016884_Carbon-nitrogen_ligase_activity,_with_glutamine_as_amido-N-donor


id: GO:0016888
description: Endodeoxyribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016888
golevel: 4
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0016888_Endodeoxyribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016889
description: Endodeoxyribonuclease activity, producing 3-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016889
golevel: 4
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0016889_Endodeoxyribonuclease_activity,_producing_3-phosphomonoesters


id: GO:0016891
description: Endoribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016891
golevel: 4
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0016891_Endoribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016893
memo: https://amigo.geneontology.org/amigo/term/GO:0016893
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0016893_Endonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_5-phosphomonoesters

description:
  Endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5-phosphomonoesters


id: GO:0016894
memo: https://amigo.geneontology.org/amigo/term/GO:0016894
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0016894_Endonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_3-phosphomonoesters

description:
  Endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3-phosphomonoesters


id: GO:0016895
description: Exodeoxyribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016895
golevel: 6
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0016895_Exodeoxyribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016896
description: Exoribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016896
golevel: 6
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0016896_Exoribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016901
memo: https://amigo.geneontology.org/amigo/term/GO:0016901
golevel: 4
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0016901_Oxidoreductase_activity,_acting_on_the_CH-OH_group_of_donors,_quinone_or_similar_compound_as_acceptor

description:
  Oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor


id: GO:0016903
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016903
golevel: 3
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0016903_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors


id: GO:0017183
description: Peptidyl-diphthamide biosynthetic process from peptidyl-histidine
memo: https://amigo.geneontology.org/amigo/term/GO:0017183
golevel: 8
name:
  GOBP.STRING_v12.0_1555112_STRINGid_GO:0017183_Peptidyl-diphthamide_biosynthetic_process_from_peptidyl-histidine


id: GO:0019171
description: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0019171
golevel: 5
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0019171_3-hydroxyacyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0019219
description: Regulation of nucleobase-containing compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0019219
golevel: 6
name:
  GOBP.STRING_v12.0_1555112_STRINGid_GO:0019219_Regulation_of_nucleobase-containing_compound_metabolic_process


id: GO:0019243
description: Methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione
memo: https://amigo.geneontology.org/amigo/term/GO:0019243
golevel: 7
name:
  GOBP.STRING_v12.0_1555112_STRINGid_GO:0019243_Methylglyoxal_catabolic_process_to_D-lactate_via_S-lactoyl-glutathione


id: GO:0019288
description: Isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
memo: https://amigo.geneontology.org/amigo/term/GO:0019288
golevel: 5
name:
  GOBP.STRING_v12.0_1555112_STRINGid_GO:0019288_Isopentenyl_diphosphate_biosynthetic_process,_methylerythritol_4-phosphate_pathway


id: GO:0019379
memo: https://amigo.geneontology.org/amigo/term/GO:0019379
golevel: 5
name:
  GOBP.STRING_v12.0_1555112_STRINGid_GO:0019379_Sulfate_assimilation,_phosphoadenylyl_sulfate_reduction_by_phosphoadenylyl-sulfate_reductase_(thioredoxin)

description:
  Sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)


id: GO:0019556
description: Histidine catabolic process to glutamate and formamide
memo: https://amigo.geneontology.org/amigo/term/GO:0019556
golevel: 5
name:
  GOBP.STRING_v12.0_1555112_STRINGid_GO:0019556_Histidine_catabolic_process_to_glutamate_and_formamide


id: GO:0019829
description: ATPase-coupled cation transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0019829
golevel: 3
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0019829_ATPase-coupled_cation_transmembrane_transporter_activity


id: GO:0030435
description: Sporulation resulting in formation of a cellular spore
memo: https://amigo.geneontology.org/amigo/term/GO:0030435
golevel: 3
name:
  GOBP.STRING_v12.0_1555112_STRINGid_GO:0030435_Sporulation_resulting_in_formation_of_a_cellular_spore


id: GO:0030604
description: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0030604
golevel: 5
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0030604_1-deoxy-D-xylulose-5-phosphate_reductoisomerase_activity


id: GO:0031233
description: Intrinsic component of external side of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031233
name:
  GOCC.STRING_v12.0_1555112_STRINGid_GO:0031233_Intrinsic_component_of_external_side_of_plasma_membrane


id: GO:0031234
description: Extrinsic component of cytoplasmic side of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031234
golevel: 4
name:
  GOCC.STRING_v12.0_1555112_STRINGid_GO:0031234_Extrinsic_component_of_cytoplasmic_side_of_plasma_membrane


id: GO:0031317
description: Tripartite ATP-independent periplasmic transporter complex
memo: https://amigo.geneontology.org/amigo/term/GO:0031317
golevel: 3
name:
  GOCC.STRING_v12.0_1555112_STRINGid_GO:0031317_Tripartite_ATP-independent_periplasmic_transporter_complex


id: GO:0031554
description: Regulation of DNA-templated transcription, termination
memo: https://amigo.geneontology.org/amigo/term/GO:0031554
golevel: 6
name:
  GOBP.STRING_v12.0_1555112_STRINGid_GO:0031554_Regulation_of_DNA-templated_transcription,_termination


id: GO:0033177
description: Proton-transporting two-sector ATPase complex, proton-transporting domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033177
golevel: 3
name:
  GOCC.STRING_v12.0_1555112_STRINGid_GO:0033177_Proton-transporting_two-sector_ATPase_complex,_proton-transporting_domain


id: GO:0033178
description: Proton-transporting two-sector ATPase complex, catalytic domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033178
golevel: 3
name:
  GOCC.STRING_v12.0_1555112_STRINGid_GO:0033178_Proton-transporting_two-sector_ATPase_complex,_catalytic_domain


id: GO:0033283
description: ATPase-coupled organic acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033283
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0033283_ATPase-coupled_organic_acid_transmembrane_transporter_activity


id: GO:0033284
description: ATPase-coupled carboxylic acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033284
golevel: 3
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0033284_ATPase-coupled_carboxylic_acid_transmembrane_transporter_activity


id: GO:0033695
description: Oxidoreductase activity, acting on CH or CH2 groups, quinone or similar compound as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0033695
golevel: 4
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0033695_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_quinone_or_similar_compound_as_acceptor


id: GO:0033744
description: L-methionine:thioredoxin-disulfide S-oxidoreductase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033744
golevel: 5
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0033744_L-methionine:thioredoxin-disulfide_S-oxidoreductase_activity


id: GO:0033818
description: Beta-ketoacyl-acyl-carrier-protein synthase III activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033818
golevel: 5
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0033818_Beta-ketoacyl-acyl-carrier-protein_synthase_III_activity


id: GO:0034023
description: 5-(carboxyamino)imidazole ribonucleotide mutase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0034023
golevel: 4
name:
  GOMF.STRING_v12.0_1555112_STRINGid_GO:0034023_5-(carboxyamino)imidazole_ribonucleotide_mutase_activity


id: GO:0034036
description: Purine ribonucleoside bisphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034036
golevel: 6
name:
  GOBP.STRING_v12.0_1555112_STRINGid_GO:0034036_Purine_ribonucleoside_bisphosphate_biosynthetic_process


id: GO:0034249
description: Negative regulation of cellular amide metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034249
golevel: 6
name:
  GOBP.STRING_v12.0_1555112_STRINGid_GO:0034249_Negative_regulation_of_cellular_amide_metabolic_process


id: GO:0034250
description: Positive regulation of cellular amide metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034250
golevel: 6
name:
  GOBP.STRING_v12.0_1555112_STRINGid_GO:0034250_Positive_regulation_of_cellular_amide_metabolic_process


id: GO:0034404
description: Nucleobase-containing small molecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034404
golevel: 5
name:
  GOBP.STRING_v12.0_1555112_STRINGid_GO:0034404_Nucleobase-containing_small_molecule_biosynthetic_process


id: GO:0034656
description: Nucleobase-containing small molecule catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034656
golevel: 5
name:
  GOBP.STRING_v12.0_1555112_STRINGid_GO:0034656_Nucleobase-containing_small_molecule_catabolic_process


