# geneInfo

ensembl_gene_id: Z1814
symbol: Z1814
gene_biotype: protein_coding
description:
  Unknown protein encoded by prophage CP-933N; Residues 1 to 393 of 397 are 69.36 pct identical to residues 1 to 394 of 1089 from GenPept 118 : gi|6901589|gb|AAF31092.1|AF069529_5 (AF069529) tail length tape measure protein [Bacteriophage HK97].


ensembl_gene_id: Z1815
symbol: Z1815
gene_biotype: protein_coding
description:
  Putative tail component L homolog encoded by prophage CP-933N; Residues 1 to 232 of 232 are 76.72 pct identical to residues 1 to 232 of 232 from GenPept 118 : gi|215122|gb|AAA96550.1| (J02459) L (tail component;232) [bacteriophage lambda].


ensembl_gene_id: Z1818
symbol: Z1818
gene_biotype: protein_coding
description:
  Putative antirepressor protein encoded by prophage CP-933N; Residues 122 to 292 of 292 are 84.21 pct identical to residues 130 to 300 of 300 from GenPept 118 : gi|8439637|gb|AAF75059.1| (AF217253) antirepressor protein [Bacteriophage P22].


ensembl_gene_id: Z1819
symbol: Z1819
gene_biotype: protein_coding
description:
  Putative tail component K homolog encoded by prophage CP-933N; Residues 47 to 242 of 245 are 86.22 pct identical to residues 1 to 196 of 199 from GenPept 118 : gi|215123|gb|AAA96551.1| (J02459) K (tail component;199) [bacteriophage lambda].


ensembl_gene_id: Z1820
symbol: Z1820
gene_biotype: protein_coding
description:
  Unknown protein encoded by prophage CP-933N; Residues 1 to 31 of 61 are 58.06 pct identical to residues 34 to 64 of 223 from GenPept 118 : gi|215124|gb|AAA96552.1| (J02459) I (tail component;223) [bacteriophage lambda].


ensembl_gene_id: Z1822
symbol: espX7
gene_biotype: protein_coding
description:
  Unknown protein encoded by prophage CP-933N; Residues 62 to 648 of 649 are 31.14 pct identical to residues 184 to 781 of 782 from GenPept 118 : gi|5669806|gb|AAD46479.1|AF121227_1 (AF121227) secreted effector protein [Salmonella dublin].


ensembl_gene_id: Z1824
symbol: espN
gene_biotype: protein_coding
description:
  Unknown protein encoded by prophage CP-933N; Residues 691 to 934 of 937 are 31.29 pct identical to residues 471 to 709 of 1014 from GenPept 118 : gi|476080|gb|AAA18229.1| (U01097) cytotoxic necrotizing factor type 2 [Escherichia coli].


ensembl_gene_id: Z1825
symbol: Z1825
gene_biotype: protein_coding
description:
  Putative IS encoded protein; Residues 1 to 301 of 301 are 99.00 pct identical to residues 1 to 301 of 301 from GenPept 118 : gi|7800436|gb|AAF70032.1|AF250878_193 (AF250878) IS2 hypothetical orf [Salmonella typhi].


ensembl_gene_id: Z1826
symbol: Z1826
gene_biotype: protein_coding
description:
  Putative IS encoded protein; Residues 1 to 53 of 53 are 100.00 pct identical to residues 1 to 53 of 121 from GenPept 118 : gi|4099031|gb|AAD10296.1| (U82084) unknown [bacteriophage SfX].


ensembl_gene_id: Z1827
symbol: Z1827
gene_biotype: protein_coding
description:
  Putative IS encoded protein; Residues 47 to 116 of 117 are 80.00 pct identical to residues 332 to 401 of 402 from GenPept 118 : gi|3883062|gb|AAC82722.1| (AF074611) transposase [Yersinia pestis].


ensembl_gene_id: Z1830
symbol: potB
gene_biotype: protein_coding
description:
  Spermidine/putrescine transport system permease; Residues 11 to 281 of 287 are 99.26 pct identical to residues 1 to 271 of 275 from Escherichia coli K-12 Strain MG1655: B1125.


ensembl_gene_id: Z1831
symbol: potA
gene_biotype: protein_coding
description:
  ATP-binding component of spermidine/putrescine transport; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.


ensembl_gene_id: Z1832
symbol: pepT
gene_biotype: protein_coding
description:
  Putative peptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family.


ensembl_gene_id: Z1833
symbol: ycfD
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 376 of 376 are 99.46 pct identical to residues 1 to 376 of 376 from Escherichia coli K-12 Strain MG1655: B1128.


ensembl_gene_id: Z1835
symbol: Z1835
gene_biotype: protein_coding
description:
  Putative integrase of prophage CP-933C; Residues 9 to 397 of 416 are 31.82 pct identical to residues 10 to 400 of 409 from GenPept 118 : gi|6759954|gb|AAF28112.1|AF153317_4 (AF153317) integrase [Shigella dysenteriae]; Belongs to the 'phage' integrase family.


ensembl_gene_id: Z1845
symbol: ssb-2
gene_biotype: protein_coding
description:
  Putative single stranded DNA-binding protein of prophage CP-933C; Residues 4 to 99 of 136 are 35.35 pct identical to residues 6 to 104 of 141 from GenPept 118 : gi|4981124|gb|AAD35689.1|AE001735_2 (AE001735) single stranded DNA-binding protein, putative [Thermotoga maritima].


ensembl_gene_id: Z1847
symbol: Z1847
gene_biotype: protein_coding
description:
  Putative capsid protein of prophage CP-933C; Residues 3 to 380 of 385 are 57.03 pct identical to residues 11 to 400 of 402 from GenPept 118 : gi|6739663|gb|AAF27364.1|AF198256_18 (AF198256) phage phi-C31 gp36-like protein [Haemophilus influenzae].


ensembl_gene_id: Z1848
symbol: Z1848
gene_biotype: protein_coding
description:
  Putative head maturation protease of prophage CP-933C; Residues 7 to 167 of 190 are 60.49 pct identical to residues 3 to 164 of 188 from GenPept 118 : gi|6739662|gb|AAF27363.1|AF198256_17 (AF198256) phage phi-C31 gp35-like protein [Haemophilus influenzae].


ensembl_gene_id: Z1849
symbol: Z1849
gene_biotype: protein_coding
description:
  Putative portal protein of prophage CP-933C; Residues 1 to 403 of 403 are 62.89 pct identical to residues 1 to 401 of 410 from GenPept 118 : gi|6739661|gb|AAF27362.1|AF198256_16 (AF198256) phage phi-105 ORF25-like protein [Haemophilus influenzae].


ensembl_gene_id: Z1851
symbol: Z1851
gene_biotype: protein_coding
description:
  Unknown protein encoded by prophage CP-933C; Residues 1 to 98 of 98 are 45.19 pct identical to residues 1 to 104 of 104 from GenPept 118 : gi|6739659|gb|AAF27360.1|AF198256_14 (AF198256) unknown [Haemophilus influenzae].


ensembl_gene_id: Z1852
symbol: Z1852
gene_biotype: protein_coding
description:
  Putative holin protein of prophage CP-933C; Residues 1 to 98 of 129 are 51.51 pct identical to residues 18 to 110 of 128 from GenPept 118 : gi|6739658|gb|AAF27359.1|AF198256_13 (AF198256) phage phi-105 holin-like protein [Haemophilus influenzae].


ensembl_gene_id: Z1853
symbol: Z1853
gene_biotype: protein_coding
description:
  Unknown protein encoded by prophage CP-933C; Residues 6 to 117 of 118 are 64.28 pct identical to residues 8 to 119 of 122 from GenPept 118 : gi|6739657|gb|AAF27358.1|AF198256_12 (AF198256) unknown [Haemophilus influenzae].


ensembl_gene_id: Z1854
symbol: Z1854
gene_biotype: protein_coding
description:
  Putative terminase of prophage CP-933C; Residues 1 to 509 of 509 are 71.31 pct identical to residues 45 to 553 of 555 from GenPept 118 : gi|6739656|gb|AAF27357.1|AF198256_11 (AF198256) phage D3 terminase-like protein [Haemophilus influenzae].


ensembl_gene_id: Z1858
symbol: phoQ
gene_biotype: protein_coding
description:
  Sensor protein PhoQ; Member of the two-component regulatory system PhoP/PhoQ involved in virulence, adaptation to low Mg(2+) environments and the control of acid resistance genes. In low periplasmic Mg(2+), PhoQ functions as a membrane-associated protein kinase that undergoes autophosphorylation and subsequently transfers the phosphate to PhoP, resulting in the expression of PhoP-activated genes (PAG) and repression of PhoP-repressed genes (PRG). In high periplasmic Mg(2+), acts as a protein phosphatase that dephosphorylates phospho-PhoP, which results in the repression of PG and may l [...]


ensembl_gene_id: Z1859
symbol: phoP
gene_biotype: protein_coding
description:
  Transcriptional regulatory protein; Member of the two-component regulatory system PhoQ/PhoP involved in virulence, adaptation to low Mg(2+) environments and the control of acid resistance genes.


ensembl_gene_id: Z1860
symbol: purB
gene_biotype: protein_coding
description:
  Adenylosuccinate lyase; Residues 1 to 456 of 456 are 99.78 pct identical to residues 1 to 456 of 456 from Escherichia coli K-12 Strain MG1655: B1131; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.


ensembl_gene_id: Z1861
symbol: ycfC
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Negative regulator of phage lambda lysogenization. Contributes to the degradation of the phage regulatory protein CII. Acts probably by holding CII on the membrane surface, away from the target promoters, but close to the FtsH protease.


ensembl_gene_id: Z1862
symbol: ycfB
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA(Lys), tRNA(Glu) and tRNA(Gln), leading to the formation of s(2)U34, the first step of tRNA-mnm(5)s(2)U34 synthesis. Sulfur is provided by IscS, via a sulfur-relay system. Binds ATP and its substrate tRNAs; Belongs to the MnmA/TRMU family.


ensembl_gene_id: Z1863
symbol: nudJ
gene_biotype: protein_coding
description:
  Putative phosphohydrolase; Residues 1 to 153 of 153 are 100.00 pct identical to residues 1 to 153 of 153 from Escherichia coli K-12 Strain MG1655: B1134; Belongs to the Nudix hydrolase family. NudJ subfamily.


ensembl_gene_id: Z1864
symbol: ymfC
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Responsible for synthesis of pseudouridine from uracil-2457 in 23S ribosomal RNA; Belongs to the pseudouridine synthase RsuA family.


ensembl_gene_id: Z1865
symbol: icdA
gene_biotype: protein_coding
description:
  Isocitrate dehydrogenase, specific for NADP+; Residues 1 to 416 of 416 are 99.27 pct identical to residues 1 to 416 of 416 from Escherichia coli K-12 Strain MG1655: B1136.


ensembl_gene_id: Z1866
symbol: Z1866
gene_biotype: protein_coding
description:
  Putative integrase of prophage CP-933X; Residues 1 to 380 of 380 are 98.42 pct identical to residues 1 to 380 of 380 from GenPept 118 : gi|215450|gb|AAA32336.1| (M61865) integrase [Bacteriophage 21]; Belongs to the 'phage' integrase family.


ensembl_gene_id: Z1867
symbol: Z1867
gene_biotype: protein_coding
description:
  Putative integrase of prophage CP-933X; Residues 1 to 78 of 78 are 98.71 pct identical to residues 1 to 78 of 78 from GenPept 118 : gi|215449|gb|AAA32335.1| (M61865) excisionase [Bacteriophage 21].


ensembl_gene_id: Z1868
symbol: Z1868
gene_biotype: protein_coding
description:
  Putative replication protein O of prophage CP-933X; Residues 14 to 246 of 247 are 66.10 pct identical to residues 49 to 284 of 312 from GenPept 118 : gi|4585405|gb|AAD25433.1|AF125520_28 (AF125520) replication protein O [Bacteriophage 933W].


ensembl_gene_id: Z1869
symbol: Z1869
gene_biotype: protein_coding
description:
  Putative replication protein P of prophage CP-933X; Residues 12 to 221 of 221 are 99.04 pct identical to residues 24 to 233 of 233 from GenPept 118 : gi|4585406|gb|AAD25434.1|AF125520_29 (AF125520) replication protein P [Bacteriophage 933W].


ensembl_gene_id: Z1870
symbol: emrE
gene_biotype: protein_coding
description:
  Methylviologen resistance protein encoded within prophage CP-933X; Residues 1 to 110 of 110 are 98.18 pct identical to residues 1 to 110 of 110 from GenPept 118 : gi|1786755|gb|AAC73644.1| (AE000160) methylviologen resistance [Escherichia coli].


ensembl_gene_id: Z1871
symbol: Z1871
gene_biotype: protein_coding
description:
  Unknown protein encoded by prophage CP-933X; Residues 1 to 508 of 508 are 99.40 pct identical to residues 1 to 508 of 508 from GenPept 118 : gi|1786756|gb|AAC73645.1| (AE000160) orf, hypothetical protein [Escherichia coli].


ensembl_gene_id: Z1872
symbol: ybcN
gene_biotype: protein_coding
description:
  Unknown protein encoded by prophage CP-933X; Residues 1 to 151 of 151 are 94.03 pct identical to residues 1 to 151 of 151 from GenPept 118 : gi|1051113|emb|CAA63327.1| (X92588) orf151 [Bacteriophage 82].


ensembl_gene_id: Z1873
symbol: rus
gene_biotype: protein_coding
description:
  Endodeoxyribonuclease RUS (Holliday junction resolvase) of prophage CP-933X; Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of CC dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of RuvAB or RuvC (By similarity).


ensembl_gene_id: Z1874
symbol: Z1874
gene_biotype: protein_coding
description:
  Putative antiterminator Q of prophage CP-933X; Residues 1 to 229 of 229 are 98.25 pct identical to residues 1 to 229 of 229 from GenPept 118 : gi|215365|gb|AAA32298.1| (J02803) Q protein [Bacteriophage 82].


ensembl_gene_id: Z1875
symbol: Z1875
gene_biotype: protein_coding
description:
  Putative holin protein of prophage CP-933X; Residues 1 to 99 of 101 are 74.74 pct identical to residues 5 to 103 of 105 from GenPept 118 : gi|3676074|emb|CAA09700.1| (AJ011579) gp13 [bacteriophage PS3].


ensembl_gene_id: Z1876
symbol: Z1876
gene_biotype: protein_coding
description:
  Putative endolysin of prophage CP-933X; Residues 1 to 158 of 158 are 95.56 pct identical to residues 1 to 158 of 158 from GenPept 118 : gi|6901642|gb|AAF31145.1| (AF069529) lysin [Bacteriophage HK97].


ensembl_gene_id: Z1877
symbol: Z1877
gene_biotype: protein_coding
description:
  Putative endopeptidase of prophage CP-933X; Residues 2 to 105 of 105 are 99.03 pct identical to residues 50 to 153 of 153 from GenPept 118 : gi|215165|gb|AAA96599.1| (J02459) Rz (cell lysis;153) [bacteriophage lambda].


ensembl_gene_id: Z1878
symbol: bor
gene_biotype: protein_coding
description:
  Putative Bor protein of prophage CP-933X; Residues 1 to 97 of 97 are 98.96 pct identical to residues 1 to 97 of 97 from GenPept 118 : gi|288764|emb|CAA39317.1| (X55792) bor [bacteriophage lambda].


ensembl_gene_id: Z1879
symbol: Z1879
gene_biotype: protein_coding
description:
  Putative envelope protein of prophage CP-933X; Residues 1 to 150 of 150 are 98.66 pct identical to residues 1 to 150 of 150 from GenPept 118 : gi|1786771|gb|AAC73659.1| (AE000161) putative an envelop protein [Escherichia coli].


ensembl_gene_id: Z1880
symbol: ybcW
gene_biotype: protein_coding
description:
  Unknown protein encoded by prophage CP-933X; Residues 1 to 68 of 68 are 100.00 pct identical to residues 1 to 68 of 68 from GenPept 118 : gi|1786772|gb|AAC73660.1| (AE000161) orf, hypothetical protein [Escherichia coli].


ensembl_gene_id: Z1881
symbol: ylcI
gene_biotype: protein_coding
description:
  Unknown protein encoded by prophage CP-933X; Residues 1 to 64 of 64 are 98.43 pct identical to residues 1 to 64 of 64 from GenPept 118 : gi|1778472|gb|AAB40755.1| (U82598) hypothetical protein [Escherichia coli].


ensembl_gene_id: Z1882
symbol: Z1882
gene_biotype: protein_coding
description:
  Putative DNA packaging protein of prophage CP-933X; Residues 1 to 181 of 181 are 97.79 pct identical to residues 1 to 181 of 181 from GenPept 118 : gi|215105|gb|AAA96533.1| (J02459) nu1 (DNA packaging;181) [bacteriophage lambda].


ensembl_gene_id: Z1883
symbol: Z1883
gene_biotype: protein_coding
description:
  Putative DNA packaging protein of prophage CP-933X; Residues 1 to 641 of 641 are 99.21 pct identical to residues 1 to 641 of 641 from GenPept 118 : gi|215106|gb|AAA96534.1| (J02459) A (DNA packaging;641) [bacteriophage lambda].


ensembl_gene_id: Z1884
symbol: Z1884
gene_biotype: protein_coding
description:
  Putative head-tail joining protein of prophage CP-933X; Residues 1 to 51 of 51 are 98.03 pct identical to residues 18 to 68 of 68 from GenPept 118 : gi|215107|gb|AAA96535.1| (J02459) W (head-tail joining;68) [bacteriophage lambda].


ensembl_gene_id: Z1885
symbol: Z1885
gene_biotype: protein_coding
description:
  Putative capsid structural protein of prophage CP-933X; Residues 1 to 533 of 533 are 98.68 pct identical to residues 1 to 533 of 533 from GenPept 118 : gi|215108|gb|AAA96536.1| (J02459) B (capsid component;533) [bacteriophage lambda].


ensembl_gene_id: Z1886
symbol: Z1886
gene_biotype: protein_coding
description:
  Putative capsid protein of prophage CP-933X; Residues 1 to 439 of 439 are 97.94 pct identical to residues 1 to 439 of 439 from GenPept 118 : gi|215109|gb|AAA96537.1| (J02459) C (capsid component;439) [bacteriophage lambda].


ensembl_gene_id: Z1887
symbol: Z1887
gene_biotype: protein_coding
description:
  Putative head-DNA stabilization protein of prophage CP-933X; Residues 3 to 100 of 115 are 96.93 pct identical to residues 1 to 98 of 110 from GenPept 118 : gi|215111|gb|AAA96539.1| (J02459) D (head-DNA stabilization;110) [bacteriophage lambda]; stop codon not determined.


ensembl_gene_id: Z1888
symbol: Z1888
gene_biotype: protein_coding
description:
  Putative capsid protein of prophage CP-933X; Residues 1 to 341 of 341 are 98.82 pct identical to residues 1 to 341 of 341 from GenPept 118 : gi|215112|gb|AAA96540.1| (J02459) E (capsid component;341) [bacteriophage lambda].


ensembl_gene_id: Z1889
symbol: Z1889
gene_biotype: protein_coding
description:
  Putative DNA packaging protein of prophage CP-933X; Residues 14 to 145 of 145 are 98.48 pct identical to residues 1 to 132 of 132 from GenPept 118 : gi|215113|gb|AAA96541.1| (J02459) Fi (DNA packaging;117) [bacteriophage lambda].


ensembl_gene_id: Z1890
symbol: Z1890
gene_biotype: protein_coding
description:
  Putative head-tail joining protein of prophage CP-933X; Residues 1 to 117 of 117 are 95.72 pct identical to residues 1 to 117 of 117 from GenPept 118 : gi|215114|gb|AAA96542.1| (J02459) Fii (head-tail joining;117) [bacteriophage lambda].


ensembl_gene_id: Z1891
symbol: Z1891
gene_biotype: protein_coding
description:
  Putative tail component of prophage CP-933X; Residues 1 to 81 of 81 are 98.76 pct identical to residues 112 to 192 of 192 from GenPept 118 : gi|215115|gb|AAA96543.1| (J02459) Z (tail component;192) [bacteriophage lambda].


ensembl_gene_id: Z1893
symbol: Z1893
gene_biotype: protein_coding
description:
  Putative tail component of prophage CP-933X; Residues 1 to 131 of 131 are 100.00 pct identical to residues 1 to 131 of 131 from GenPept 118 : gi|215116|gb|AAA96544.1| (J02459) U (tail component;131) [bacteriophage lambda].


ensembl_gene_id: Z1894
symbol: Z1894
gene_biotype: protein_coding
description:
  Putative tail component of prophage CP-933X; Residues 11 to 256 of 256 are 95.93 pct identical to residues 1 to 246 of 246 from GenPept 118 : gi|215117|gb|AAA96545.1| (J02459) V (tail component;256) [bacteriophage lambda].


ensembl_gene_id: Z1895
symbol: Z1895
gene_biotype: protein_coding
description:
  Putative tail component of prophage CP-933X; Residues 1 to 140 of 140 are 96.42 pct identical to residues 1 to 140 of 140 from GenPept 118 : gi|215118|gb|AAA96546.1| (J02459) G (tail component;140) [bacteriophage lambda].


ensembl_gene_id: Z1896
symbol: Z1896
gene_biotype: protein_coding
description:
  Putative tail component of prophage CP-933X; Residues 1 to 144 of 144 are 100.00 pct identical to residues 1 to 144 of 144 from GenPept 118 : gi|215119|gb|AAA96547.1| (J02459) T (tail component;144) [bacteriophage lambda].


ensembl_gene_id: Z1898
symbol: Z1898
gene_biotype: protein_coding
description:
  Putative tail component of prophage CP-933X; Residues 1 to 446 of 446 are 98.87 pct identical to residues 1 to 446 of 853 from GenPept 118 : gi|215120|gb|AAA96548.1| (J02459) H (tail component;853) [bacteriophage lambda].


ensembl_gene_id: Z1902
symbol: Z1902
gene_biotype: protein_coding
description:
  Putative head-tail adaptor of prophage CP-933X; Residues 6 to 116 of 116 are 44.14 pct identical to residues 4 to 112 of 112 from GenPept 118 : gi|6901597|gb|AAF31100.1| (AF069529) putative head-tail adaptor [Bacteriophage HK97].


ensembl_gene_id: Z1903
symbol: Z1903
gene_biotype: protein_coding
description:
  Unknown protein encoded by prophage CP-933X; Residues 1 to 55 of 81 are 67.27 pct identical to residues 1 to 55 of 149 from GenPept 118 : gi|6901598|gb|AAF31101.1| (AF069529) Gp10 [Bacteriophage HK97].


ensembl_gene_id: Z1905
symbol: Z1905
gene_biotype: protein_coding
description:
  Unknown protein encoded by prophage CP-933X; Residues 1 to 88 of 88 are 73.86 pct identical to residues 62 to 149 of 149 from GenPept 118 : gi|6901598|gb|AAF31101.1| (AF069529) Gp10 [Bacteriophage HK97].


ensembl_gene_id: Z1906
symbol: Z1906
gene_biotype: protein_coding
description:
  Unknown protein encoded by prophage CP-933X; Residues 1 to 113 of 114 are 49.12 pct identical to residues 1 to 114 of 115 from GenPept 118 : gi|6901599|gb|AAF31102.1| (AF069529) Gp11 [Bacteriophage HK97].


ensembl_gene_id: Z1908
symbol: Z1908
gene_biotype: protein_coding
description:
  Putative tail component of prophage CP-933X; Residues 25 to 258 of 262 are 67.09 pct identical to residues 1 to 234 of 234 from GenPept 118 : gi|6901588|gb|AAF31091.1|AF069529_4 (AF069529) major tail subunit [Bacteriophage HK97].


ensembl_gene_id: Z1910
symbol: Z1910
gene_biotype: protein_coding
description:
  Unknown protein encoded by prophage CP-933X; Residues 1 to 77 of 80 are 62.33 pct identical to residues 1 to 76 of 224 from GenPept 118 : gi|6901601|gb|AAF31104.1| (AF069529) Gp14 [Bacteriophage HK97].


ensembl_gene_id: Z1912
symbol: Z1912
gene_biotype: protein_coding
description:
  Unknown protein encoded by prophage CP-933X; Residues 1 to 92 of 93 are 60.86 pct identical to residues 133 to 224 of 224 from GenPept 118 : gi|6901601|gb|AAF31104.1| (AF069529) Gp14 [Bacteriophage HK97].


ensembl_gene_id: Z1913
symbol: Z1913
gene_biotype: protein_coding
description:
  Putative tail component of prophage CP-933X; Residues 1 to 1022 of 1026 are 52.47 pct identical to residues 1 to 1079 of 1089 from GenPept 118 : gi|6901589|gb|AAF31092.1|AF069529_5 (AF069529) tail length tape measure protein [Bacteriophage HK97].


ensembl_gene_id: Z1914
symbol: Z1914
gene_biotype: protein_coding
description:
  Putative minor tail fiber protein of prophage CP-933X; Residues 1 to 137 of 145 are 72.26 pct identical to residues 1 to 136 of 232 from GenPept 118 : gi|215122|gb|AAA96550.1| (J02459) L (tail component;232) [bacteriophage lambda].


ensembl_gene_id: Z1915
symbol: Z1915
gene_biotype: protein_coding
description:
  Putative tail protein (partial) of prophage CP-933X; Residues 8 to 366 of 388 are 81.05 pct identical to residues 11 to 369 of 1132 from GenPept 118 : gi|215125|gb|AAA96553.1| (J02459) J (tail:host specificity;1132) [bacteriophage lambda].


ensembl_gene_id: Z1916
symbol: Z1916
gene_biotype: protein_coding
description:
  Putative tail protein (partial) of prophage CP-933X; Residues 1 to 781 of 782 are 62.37 pct identical to residues 376 to 1131 of 1132 from GenPept 118 : gi|215125|gb|AAA96553.1| (J02459) J (tail:host specificity;1132) [bacteriophage lambda].


ensembl_gene_id: Z1917
symbol: Z1917
gene_biotype: protein_coding
description:
  Putative outer membrane protein of prophage CP-933X; Residues 1 to 199 of 199 are 75.87 pct identical to residues 1 to 199 of 199 from GenPept 118 : gi|7532789|gb|AAF63231.1|AF151091_2 (AF151091) Lom [prophage P-EibA].


ensembl_gene_id: Z1918
symbol: Z1918
gene_biotype: protein_coding
description:
  Putative membrane protein of prophage CP-933X; Residues 1 to 498 of 973 are 95.78 pct identical to residues 1 to 498 of 1122 from GenPept 118 : gi|1787636|gb|AAC74454.1| (AE000234) putative membrane protein [Escherichia coli].


ensembl_gene_id: Z1919
symbol: Z1919
gene_biotype: protein_coding
description:
  Unknown protein encoded by prophage CP-933X; Residues 45 to 248 of 249 are 64.21 pct identical to residues 5 to 205 of 206 from GenPept 118 : gi|508991|gb|AAA96556.1| (J02459) orf206b [bacteriophage lambda].


ensembl_gene_id: Z1920
symbol: Z1920
gene_biotype: protein_coding
description:
  Putative tail fiber protein of prophage CP-933X; Residues 1 to 191 of 193 are 94.76 pct identical to residues 1 to 191 of 191 from GenPept 118 : gi|2367120|gb|AAC74619.1| (AE000252) orf, hypothetical protein [Escherichia coli].


ensembl_gene_id: Z1921
symbol: Z1921
gene_biotype: protein_coding
description:
  Unknown protein encoded by prophage CP-933X; Residues 1 to 289 of 296 are 84.42 pct identical to residues 1 to 289 of 292 from GenPept 118 : gi|7162108|emb|CAB76676.1| (Y19180) putative catalase [Salmonella typhimurium].


ensembl_gene_id: Z1922
symbol: Z1922
gene_biotype: protein_coding
description:
  Unknown protein encoded by prophage CP-933X; Residues 1 to 168 of 168 are 89.28 pct identical to residues 1 to 168 of 168 from GenPept 118 : gi|924816|gb|AAA73836.1| (U25425) yciE gene product [Escherichia coli].


ensembl_gene_id: Z1923
symbol: Z1923
gene_biotype: protein_coding
description:
  Unknown protein encoded by prophage CP-933X; Residues 3 to 168 of 168 are 80.12 pct identical to residues 1 to 166 of 166 from GenPept 118 : gi|1787512|gb|AAC74340.1| (AE000224) putative structural proteins [Escherichia coli].


ensembl_gene_id: Z1924
symbol: Z1924
gene_biotype: protein_coding
description:
  Unknown protein encoded by prophage CP-933X; Residues 1 to 60 of 60 are 88.33 pct identical to residues 1 to 59 of 60 from GenPept 118 : gi|6851081|emb|CAB71036.1| (AJ251362) hypothetical protein [Salmonella typhimurium].


ensembl_gene_id: Z1925
symbol: Z1925
gene_biotype: protein_coding
description:
  Unknown protein encoded by prophage CP-933X; Residues 80 to 222 of 222 are 99.30 pct identical to residues 1 to 143 of 143 from GenPept 118 : gi|1786775|gb|AAC73663.1| (AE000161) orf, hypothetical protein [Escherichia coli].


ensembl_gene_id: Z1926
symbol: Z1926
gene_biotype: protein_coding
description:
  Unknown protein encoded by prophage CP-933X; Residues 1 to 61 of 82 are 98.36 pct identical to residues 1 to 61 of 61 from GenPept 118 : gi|2367110|gb|AAC73664.1| (AE000161) orf, hypothetical protein [Escherichia coli].


ensembl_gene_id: Z1927
symbol: Z1927
gene_biotype: protein_coding
description:
  Unknown protein encoded by ISEc8 in prophage CP-933X; Residues 1 to 122 of 152 are 98.36 pct identical to residues 1 to 122 of 133 from GenPept 118 : gi|3414881|gb|AAC31492.1| (AF071034) L0013 [Escherichia coli].


ensembl_gene_id: Z1928
symbol: Z1928
gene_biotype: protein_coding
description:
  Unknown protein encoded by ISEc8 in prophage CP-933X; Residues 1 to 30 of 30 are 93.33 pct identical to residues 86 to 115 of 115 from GenPept 118 : gi|3661485|gb|AAC61716.1| (AF081284) Hp4 [Escherichia coli].


ensembl_gene_id: Z1929
symbol: Z1929
gene_biotype: protein_coding
description:
  Unknown protein encoded by ISEc8 in prophage CP-933X; Residues 1 to 512 of 512 are 100.00 pct identical to residues 1 to 512 of 512 from GenPept 118 : gi|3414883|gb|AAC31494.1| (AF071034) L0015 [Escherichia coli].


ensembl_gene_id: Z1930
symbol: Z1930
gene_biotype: protein_coding
description:
  Putative protease encoded within prophage CP-933X; Residues 1 to 412 of 494 are 75.97 pct identical to residues 8 to 417 of 438 from GenPept 118 : gi|550103|emb|CAA52339.1| (X74278) ORF [Escherichia coli].


ensembl_gene_id: Z1931
symbol: ompT
gene_biotype: protein_coding
description:
  Outer membrane protein 3b (a), protease VII; Protease that can cleave T7 RNA polymerase, ferric enterobactin receptor protein (FEP), antimicrobial peptide protamine and other proteins. This protease has a specificity for paired basic residues (By similarity).


ensembl_gene_id: Z1932
symbol: Orf
gene_biotype: protein_coding
description:
  Orf; Residues 16 to 111 of 111 are 38.54 pct identical to residues 11 to 105 of 192 from GenPept 118 : gi|6855358|emb|CAB71249.1| (AL138598) putative DNA-binding protein. [Streptomyces coelicolor A3(2)].


ensembl_gene_id: Z1933
symbol: IS629
gene_biotype: protein_coding
description:
  Unknown in IS629; Residues 1 to 108 of 108 are 100.00 pct identical to residues 1 to 108 of 108 from GenPept 118 : gi|3822180|gb|AAC70134.1| (AF074613) hypothetical protein [Escherichia coli O157:H7].


ensembl_gene_id: Z1934
symbol: Z1934
gene_biotype: protein_coding
description:
  Putative transposase for IS629; Residues 1 to 215 of 215 are 99.53 pct identical to residues 82 to 296 of 296 from GenPept 118 : gi|3822179|gb|AAC70133.1| (AF074613) transposase [Escherichia coli O157:H7].


ensembl_gene_id: Z1935
symbol: Z1935
gene_biotype: protein_coding
description:
  Hypothetical protein; Residues 1 to 70 of 70 are 92.85 pct identical to residues 1 to 70 of 70 from Escherichia coli K-12 Strain MG1655: B1173.


ensembl_gene_id: Z1936
symbol: minE
gene_biotype: protein_coding
description:
  Cell division topological specificity factor, reverses MinC inhibition of ftsZ ring formation; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell (By similarity).


ensembl_gene_id: Z1937
symbol: minD
gene_biotype: protein_coding
description:
  Cell division inhibitor, a membrane ATPase, activates minC; ATPase required for the correct placement of the division site. Cell division inhibitors MinC and MinD act in concert to form an inhibitor capable of blocking formation of the polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings (By similarity).


ensembl_gene_id: Z1938
symbol: minC
gene_biotype: protein_coding
description:
  Cell division inhibitor, inhibits ftsZ ring formation; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family.


ensembl_gene_id: Z1939
symbol: ycgJ
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 122 of 122 are 98.36 pct identical to residues 1 to 122 of 122 from Escherichia coli K-12 Strain MG1655: B1177.


ensembl_gene_id: Z1940
symbol: ycgK
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 133 of 133 are 99.24 pct identical to residues 1 to 133 of 133 from Escherichia coli K-12 Strain MG1655: B1178.


ensembl_gene_id: Z1941
symbol: ycgL
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 108 of 108 are 100.00 pct identical to residues 1 to 108 of 108 from Escherichia coli K-12 Strain MG1655: B1179.


ensembl_gene_id: Z1942
symbol: ycgM
gene_biotype: protein_coding
description:
  Putative isomerase; Residues 1 to 219 of 219 are 99.54 pct identical to residues 1 to 219 of 219 from Escherichia coli K-12 Strain MG1655: B1180.


ensembl_gene_id: Z1943
symbol: ycgN
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 158 of 158 are 100.00 pct identical to residues 1 to 158 of 158 from Escherichia coli K-12 Strain MG1655: B1181; Belongs to the UPF0260 family.


ensembl_gene_id: Z1944
symbol: hlyE
gene_biotype: protein_coding
description:
  Putative pore forming hemolysin; Toxin, which has some hemolytic activity towards mammalian cells. Acts by forming a pore-like structure upon contact with mammalian cells (By similarity); Belongs to the hemolysin E family.


ensembl_gene_id: Z1946
symbol: umuD
gene_biotype: protein_coding
description:
  SOS mutagenesis; Involved in UV protection and mutation. Essential for induced (or SOS) mutagenesis. May modify the DNA replication machinery to allow bypass synthesis across a damaged template (By similarity).


ensembl_gene_id: Z1947
symbol: umuC
gene_biotype: protein_coding
description:
  SOS mutagenesis and repair; Residues 1 to 422 of 422 are 99.28 pct identical to residues 1 to 422 of 422 from Escherichia coli K-12 Strain MG1655: B1184; Belongs to the DNA polymerase type-Y family.


ensembl_gene_id: Z1948
symbol: dsbB
gene_biotype: protein_coding
description:
  Reoxidizes DsbA protein following formation of disulfide bond in P-ring of flagella; Required for disulfide bond formation in some periplasmic proteins such as PhoA or OmpA. Acts by oxidizing the DsbA protein (By similarity); Belongs to the DsbB family.


ensembl_gene_id: Z1949
symbol: nhaB
gene_biotype: protein_coding
description:
  Na+/H+ antiporter, pH independent; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaB Na(+)/H(+) (TC 2.A.34) antiporter family.


ensembl_gene_id: Z1950
symbol: fadR
gene_biotype: protein_coding
description:
  Negative regulator for fad regulon, and positive activator of fabA; Multifunctional regulator of fatty acid metabolism.


ensembl_gene_id: Z1951
symbol: ycgB
gene_biotype: protein_coding
description:
  Putative sporulation protein; Residues 1 to 510 of 510 are 99.80 pct identical to residues 1 to 510 of 510 from Escherichia coli K-12 Strain MG1655: B1188.


ensembl_gene_id: Z1952
symbol: dadA
gene_biotype: protein_coding
description:
  D-amino acid dehydrogenase subunit; Oxidative deamination of D-amino acids; Belongs to the DadA oxidoreductase family.


ensembl_gene_id: Z1953
symbol: dadX
gene_biotype: protein_coding
description:
  Alanine racemase 2, catabolic; Isomerizes L-alanine to D-alanine which is then oxidized to pyruvate by DadA.


ensembl_gene_id: Z1954
symbol: nhaP2
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; K(+)/H(+) antiporter that extrudes potassium in exchange for external protons and maintains the internal concentration of potassium under toxic levels; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family. NhaP2 subfamily.


ensembl_gene_id: Z1955
symbol: ldcA
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Releases the terminal D-alanine residue from the cytoplasmic tetrapeptide recycling product L-Ala-gamma-D-Glu-meso-Dap-D-Ala. Can also cleave D-Ala from murein derivatives containing the tetrapeptide, i.e. MurNAc-tetrapeptide, UDP-MurNAc-tetrapeptide, GlcNAc-MurNAc- tetrapeptide, and GlcNAc-anhMurNAc-tetrapeptide. Does not act on murein sacculi or cross-linked muropeptides. The tripeptides produced by the LcdA reaction can then be reused as peptidoglycan building blocks; LcdA is thereby involved in murein recycling (By similarity); Belongs to the peptidase S6 [...]


ensembl_gene_id: Z1956
symbol: mltE
gene_biotype: protein_coding
description:
  Murein transglycosylase E; Murein-degrading enzyme. May play a role in recycling of muropeptides during cell elongation and/or cell division. Preferentially cleaves at a distance of more than two disaccharide units from the ends of the glycan chain.


ensembl_gene_id: Z1957
symbol: Z1957
gene_biotype: protein_coding
description:
  Transposase for IS629; Residues 1 to 296 of 296 are 96.62 pct identical to residues 1 to 296 of 296 from GenPept 118 : gi|3822179|gb|AAC70133.1| (AF074613) transposase [Escherichia coli O157:H7].


ensembl_gene_id: Z1958
symbol: Z1958
gene_biotype: protein_coding
description:
  Unknown in IS629; Residues 1 to 108 of 108 are 98.14 pct identical to residues 1 to 108 of 108 from GenPept 118 : gi|6453799|gb|AAF09023.1| (AF139596) unknown [Shigella flexneri].


ensembl_gene_id: Z1959
symbol: ycgR
gene_biotype: protein_coding
description:
  Hypothetical protein; Residues 1 to 198 of 198 are 97.47 pct identical to residues 1 to 198 of 244 from Escherichia coli K-12 Strain MG1655: B1194.


ensembl_gene_id: Z1960
symbol: ymgE
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 84 of 84 are 97.61 pct identical to residues 1 to 84 of 84 from Escherichia coli K-12 Strain MG1655: B1195.


ensembl_gene_id: Z1961
symbol: prrA
gene_biotype: protein_coding
description:
  Putative outer membrane receptor, probably tonB dependent; Residues 1 to 656 of 656 are 97.71 pct identical to residues 1 to 656 of 656 from GenPept 118 : gi|1816656|gb|AAB42091.1| (U85771) TonB dependent outer membrane receptor [Escherichia coli].


ensembl_gene_id: Z1962
symbol: modD
gene_biotype: protein_coding
description:
  Putative molybdenum transport protein; Residues 1 to 284 of 284 are 91.00 pct identical to residues 1 to 285 of 285 from GenPept 118 : gi|3661478|gb|AAC61710.1| (AF081283) molybdenum transport protein [Escherichia coli]; Belongs to the NadC/ModD family.


ensembl_gene_id: Z1963
symbol: Z1963
gene_biotype: protein_coding
description:
  Hypothetical protein; Residues 1 to 214 of 214 are 98.13 pct identical to residues 1 to 214 of 270 from GenPept 118 : gi|3661479|gb|AAC61711.1| (AF081283) Orf2 [Escherichia coli].


ensembl_gene_id: Z1964
symbol: Z1964
gene_biotype: protein_coding
description:
  Putative iron compound ABC transporter, ATP-binding protein; Residues 46 to 193 of 252 are 79.72 pct identical to residues 1 to 148 of 166 from GenPept 118 : gi|3661480|gb|AAC61712.1| (AF081283) ferric enterobactin transport ATP-binding protein [Escherichia coli].


ensembl_gene_id: Z1965
symbol: fecD
gene_biotype: protein_coding
description:
  Putative iron compound ABC transporter, permease protein; Residues 2 to 324 of 326 are 40.00 pct identical to residues 8 to 334 of 337 from GenPept 118 : gi|1574312|gb|AAC23119.1| (U32825) iron chelatin ABC transporter, permease protein, putative [Haemophilus influenzae Rd]; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: Z1966
symbol: Z1966
gene_biotype: protein_coding
description:
  Hypothetical protein; Residues 34 to 292 of 340 are 26.59 pct identical to residues 55 to 316 of 319 from GenPept 118 : gi|1124959|emb|CAA63627.1| (X93084) orf2 [Methanosarcina barkeri].


ensembl_gene_id: Z1968
symbol: treA
gene_biotype: protein_coding
description:
  Trehalase, periplasmic; Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system; Belongs to the glycosyl hydrolase 37 family.


ensembl_gene_id: Z1969
symbol: ycgC
gene_biotype: protein_coding
description:
  Putative PTS system enzyme I; Residues 1 to 473 of 473 are 98.52 pct identical to residues 1 to 473 of 473 from Escherichia coli K-12 Strain MG1655: B1198; Belongs to the PEP-utilizing enzyme family.


ensembl_gene_id: Z1970
symbol: dhaL
gene_biotype: protein_coding
description:
  Putative dihydroxyacetone kinase; Residues 1 to 210 of 210 are 98.09 pct identical to residues 1 to 210 of 210 from Escherichia coli K-12 Strain MG1655: B1199.


ensembl_gene_id: Z1971
symbol: dhaK
gene_biotype: protein_coding
description:
  Putative dihydroxyacetone kinase; Residues 1 to 366 of 366 are 99.18 pct identical to residues 1 to 366 of 366 from Escherichia coli K-12 Strain MG1655: B1200.


ensembl_gene_id: Z1972
symbol: ycgV
gene_biotype: protein_coding
description:
  Partial putative adhesion protein; Residues 1 to 543 of 547 are 98.52 pct identical to residues 1 to 543 of 955 from Escherichia coli K-12 Strain MG1655: B1202; To B.pertussis prn N-terminal region.


ensembl_gene_id: Z1974
symbol: ychF
gene_biotype: protein_coding
description:
  Putative GTP-binding protein; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. YchF/OLA1 subfamily.


ensembl_gene_id: Z1975
symbol: pth
gene_biotype: protein_coding
description:
  peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.


ensembl_gene_id: Z1976
symbol: ychH
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 92 of 92 are 100.00 pct identical to residues 1 to 92 of 92 from Escherichia coli K-12 Strain MG1655: B1205.


ensembl_gene_id: Z1977
symbol: ychM
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Responsible for the aerobic transport of succinate from the periplasm to the cytoplasm at acidic pH; Belongs to the SLC26A/SulP transporter (TC 2.A.53) family.


ensembl_gene_id: Z1978
symbol: prsA
gene_biotype: protein_coding
description:
  Phosphoribosylpyrophosphate synthetase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.


ensembl_gene_id: Z1979
symbol: ychB
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol; Belongs to the GHMP kinase family. IspE subfamily.


ensembl_gene_id: Z1980
symbol: hemM
gene_biotype: protein_coding
description:
  An enzyme in main pathway of synthesis of 5-aminolevulinate, possibly glutamyl-tRNA dehydrogenase; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein.


ensembl_gene_id: Z1981
symbol: hemA
gene_biotype: protein_coding
description:
  Enzyme in alternate path of synthesis of 5-aminolevulinate; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).


ensembl_gene_id: Z1982
symbol: prfA
gene_biotype: protein_coding
description:
  Peptide chain release factor RF-1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.


ensembl_gene_id: Z1983
symbol: hemK
gene_biotype: protein_coding
description:
  Possible protoporphyrinogen oxidase; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.


ensembl_gene_id: Z1984
symbol: ychQ
gene_biotype: protein_coding
description:
  Hypothetical protein; Residues 1 to 130 of 130 are 98.46 pct identical to residues 1 to 130 of 130 from Escherichia coli K-12 Strain MG1655: B1213.


ensembl_gene_id: Z1985
symbol: ychA
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 269 of 269 are 100.00 pct identical to residues 1 to 269 of 269 from Escherichia coli K-12 Strain MG1655: B1214; Belongs to the UPF0162 family.


ensembl_gene_id: Z1986
symbol: kdsA
gene_biotype: protein_coding
description:
  2-dehydro-3-deoxyphosphooctulonate aldolase; Residues 1 to 284 of 284 are 99.64 pct identical to residues 1 to 284 of 284 from Escherichia coli K-12 Strain MG1655: B1215; Belongs to the KdsA family.


ensembl_gene_id: Z1991
symbol: chaA
gene_biotype: protein_coding
description:
  Sodium-calcium/proton antiporter; Residues 1 to 366 of 366 are 99.72 pct identical to residues 1 to 366 of 366 from Escherichia coli K-12 Strain MG1655: B1216.


ensembl_gene_id: Z1992
symbol: chaB
gene_biotype: protein_coding
description:
  Cation transport regulator; Might be a regulator of the sodium-potassium/proton antiporter ChaA; Belongs to the ChaB family.


ensembl_gene_id: Z1993
symbol: chaC
gene_biotype: protein_coding
description:
  Cation transport regulator; Catalyzes the cleavage of glutathione into 5-oxo-L-proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides; Belongs to the gamma-glutamylcyclotransferase family.


ensembl_gene_id: Z1994
symbol: ychN
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 117 of 117 are 100.00 pct identical to residues 1 to 117 of 117 from Escherichia coli K-12 Strain MG1655: B1219.


ensembl_gene_id: Z1995
symbol: ychP
gene_biotype: protein_coding
description:
  Hypothetical protein; Residues 1 to 417 of 417 are 99.52 pct identical to residues 1 to 417 of 417 from Escherichia coli K-12 Strain MG1655: B1220.


ensembl_gene_id: Z1996
symbol: narL
gene_biotype: protein_coding
description:
  Nitrate/nitrite response regulator protein NarL; This protein activates the expression of the nitrate reductase (narGHJI) and formate dehydrogenase-N (fdnGHI) operons and represses the transcription of the fumarate reductase (frdABCD) operon in response to a nitrate/nitrite induction signal transmitted by either the NarX or NarQ proteins.


ensembl_gene_id: Z1998
symbol: narX
gene_biotype: protein_coding
description:
  Nitrate/nitrate sensor, histidine protein kinase acts on NarL regulator; Acts as a sensor for nitrate/nitrite and transduces signal of nitrate availability to the NarL protein and of both nitrate/nitrite to the NarP protein. NarX probably activates NarL and NarP by phosphorylation in the presence of nitrate. NarX also plays a negative role in controlling NarL activity, probably through dephosphorylation in the absence of nitrate (By similarity).


ensembl_gene_id: Z2000
symbol: narK
gene_biotype: protein_coding
description:
  Nitrite extrusion protein; Residues 1 to 463 of 463 are 99.78 pct identical to residues 1 to 463 of 463 from Escherichia coli K-12 Strain MG1655: B1223.


ensembl_gene_id: Z2001
symbol: narG
gene_biotype: protein_coding
description:
  Nitrate reductase 1, alpha subunit; Residues 1 to 1247 of 1247 are 99.91 pct identical to residues 1 to 1247 of 1247 from Escherichia coli K-12 Strain MG1655: B1224; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: Z2002
symbol: narH
gene_biotype: protein_coding
description:
  Nitrate reductase 1, beta subunit; Residues 1 to 512 of 512 are 99.80 pct identical to residues 1 to 512 of 512 from Escherichia coli K-12 Strain MG1655: B1225.


ensembl_gene_id: Z2003
symbol: narJ
gene_biotype: protein_coding
description:
  Nitrate reductase 1, delta subunit, assembly function; Chaperone required for proper molybdenum cofactor insertion and final assembly of the membrane-bound respiratory nitrate reductase 1.


ensembl_gene_id: Z2004
symbol: narI
gene_biotype: protein_coding
description:
  Nitrate reductase 1, cytochrome b(NR), gamma subunit; Residues 1 to 225 of 225 are 99.55 pct identical to residues 1 to 225 of 225 from Escherichia coli K-12 Strain MG1655: B1227.


ensembl_gene_id: Z2005
symbol: ychS
gene_biotype: protein_coding
description:
  Hypothetical protein; Residues 2 to 67 of 189 are 86.36 pct identical to residues 1 to 66 of 91 from Escherichia coli K-12 Strain MG1655: B1228.


ensembl_gene_id: Z2008
symbol: purU
gene_biotype: protein_coding
description:
  Formyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4).


ensembl_gene_id: Z2009
symbol: ychJ
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 152 of 152 are 99.34 pct identical to residues 1 to 152 of 152 from Escherichia coli K-12 Strain MG1655: B1233; Belongs to the UPF0225 family.


ensembl_gene_id: Z2010
symbol: ychK
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 314 of 314 are 99.68 pct identical to residues 1 to 314 of 314 from Escherichia coli K-12 Strain MG1655: B1234.


ensembl_gene_id: Z2011
symbol: hnr
gene_biotype: protein_coding
description:
  Hnr protein; Regulates the turnover of the sigma S factor (RpoS) by promoting its proteolysis in exponentially growing cells. Acts by binding and delivering RpoS to the ClpXP protease. RssB is not co- degraded with RpoS, but is released from the complex and can initiate a new cycle of RpoS recognition and degradation.


ensembl_gene_id: Z2012
symbol: galU
gene_biotype: protein_coding
description:
  Glucose-1-phosphate uridylyltransferase; May play a role in stationary phase survival; Belongs to the UDPGP type 2 family.


ensembl_gene_id: Z2013
symbol: hns
gene_biotype: protein_coding
description:
  DNA-binding protein HLP-II (HU, BH2, HD, NS); A DNA-binding protein implicated in transcriptional repression and chromosome organization and compaction. Binds nucleation sites in AT-rich DNA and bridges them, forming higher-order nucleoprotein complexes and condensing the chromosome. As many horizontally transferred genes are AT-rich, it plays a central role in silencing foreign genes. A subset of genes are repressed by H-NS in association with other proteins (By similarity).


ensembl_gene_id: Z2016
symbol: adhE
gene_biotype: protein_coding
description:
  CoA-linked acetaldehyde dehydrogenase and iron-dependent alcohol dehydrogenase; This enzyme has three activities: ADH, ACDH, and PFL- deactivase. In aerobic conditions it acts as a hydrogen peroxide scavenger. The PFL deactivase activity catalyzes the quenching of the pyruvate-formate-lyase catalyst in an iron, NAD, and CoA dependent reaction (By similarity); In the N-terminal section; belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: Z2017
symbol: ychE
gene_biotype: protein_coding
description:
  Putative channel protein; Residues 1 to 215 of 215 are 99.53 pct identical to residues 1 to 215 of 215 from Escherichia coli K-12 Strain MG1655: B1242.


ensembl_gene_id: Z2019
symbol: oppA
gene_biotype: protein_coding
description:
  Oligopeptide transport; Residues 1 to 543 of 543 are 99.07 pct identical to residues 1 to 543 of 543 from Escherichia coli K-12 Strain MG1655: B1243.


ensembl_gene_id: Z2020
symbol: oppB
gene_biotype: protein_coding
description:
  Oligopeptide transport permease protein; Part of the binding-protein-dependent transport system for oligopeptides; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. OppBC subfamily.


ensembl_gene_id: Z2021
symbol: oppC
gene_biotype: protein_coding
description:
  Homolog of Salmonella oligopeptide transport permease protein; Part of the binding-protein-dependent transport system for oligopeptides; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. OppBC subfamily.


ensembl_gene_id: Z2022
symbol: oppD
gene_biotype: protein_coding
description:
  Homolog of Salmonella ATP-binding protein of oligopeptide ABC transport system; Residues 1 to 337 of 337 are 99.10 pct identical to residues 1 to 337 of 337 from Escherichia coli K-12 Strain MG1655: B1246; Belongs to the ABC transporter superfamily.


ensembl_gene_id: Z2023
symbol: oppF
gene_biotype: protein_coding
description:
  Homolog of Salmonella ATP-binding protein of oligopeptide ABC transport system; Residues 1 to 334 of 334 are 99.70 pct identical to residues 1 to 334 of 334 from Escherichia coli K-12 Strain MG1655: B1247; Belongs to the ABC transporter superfamily.


ensembl_gene_id: Z2024
symbol: yciU
gene_biotype: protein_coding
description:
  Hypothetical protein; Residues 1 to 111 of 111 are 99.09 pct identical to residues 25 to 135 of 135 from Escherichia coli K-12 Strain MG1655: B1248; Belongs to the UPF0263 family.


ensembl_gene_id: Z2026
symbol: cls
gene_biotype: protein_coding
description:
  Cardiolipin synthase, a major membrane phospholipid; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol.


ensembl_gene_id: Z2028
symbol: kch
gene_biotype: protein_coding
description:
  Putative potassium channel protein; Residues 1 to 417 of 417 are 99.52 pct identical to residues 1 to 417 of 417 from Escherichia coli K-12 Strain MG1655: B1250.


ensembl_gene_id: Z2029
symbol: yciI
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 130 of 130 are 99.23 pct identical to residues 1 to 130 of 130 from Escherichia coli K-12 Strain MG1655: B1251.


ensembl_gene_id: Z2030
symbol: tonB
gene_biotype: protein_coding
description:
  Energy transducer; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.


ensembl_gene_id: Z2031
symbol: yciA
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 132 of 132 are 99.24 pct identical to residues 1 to 132 of 132 from Escherichia coli K-12 Strain MG1655: B1253.


ensembl_gene_id: Z2032
symbol: yciB
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Involved in cell division; probably involved in intracellular septation; Belongs to the YciB family.


ensembl_gene_id: Z2033
symbol: yciC
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 247 of 247 are 99.59 pct identical to residues 1 to 247 of 247 from Escherichia coli K-12 Strain MG1655: B1255.


ensembl_gene_id: Z2034
symbol: yciD
gene_biotype: protein_coding
description:
  Putative outer membrane protein; Residues 1 to 212 of 212 are 96.69 pct identical to residues 1 to 212 of 212 from Escherichia coli K-12 Strain MG1655: B1256.


ensembl_gene_id: Z2036
symbol: intO
gene_biotype: protein_coding
description:
  Putative integrase for prophage CP-933O; Residues 2 to 371 of 376 are 50.53 pct identical to residues 3 to 372 of 380 from GenPept 118 : gi|215450|gb|AAA32336.1| (M61865) integrase [Bacteriophage 21]; Belongs to the 'phage' integrase family.


ensembl_gene_id: Z2037
symbol: exoO
gene_biotype: protein_coding
description:
  Putative exonuclease VIII, ds DNA exonuclease, 5' --> 3' specific encoded by prophage CP-933O; Residues 1 to 256 of 823 are 92.96 pct identical to residues 1 to 256 of 306 from GenPept 118 : gi|1787859|gb|AAC74649.1| (AE000253) orf, hypothetical protein [Escherichia coli].


ensembl_gene_id: Z2038
symbol: Z2038
gene_biotype: protein_coding
description:
  Unknown protein encoded by prophage CP-933O; Residues 4 to 66 of 66 are 93.65 pct identical to residues 1 to 63 of 63 from GenPept 118 : gi|1787858|gb|AAC74648.1| (AE000253) orf, hypothetical protein [Escherichia coli].


ensembl_gene_id: Z2039
symbol: Z2039
gene_biotype: protein_coding
description:
  Putative regulator of cell division encoded by prophage CP-933O; Residues 36 to 97 of 97 are 88.70 pct identical to residues 1 to 62 of 62 from GenPept 118 : gi|1787857|gb|AAC74647.1| (AE000253) inhibition of cell division [Escherichia coli].


ensembl_gene_id: Z2042
symbol: Z2042
gene_biotype: protein_coding
description:
  Unknown protein encoded by prophage CP-933O; Residues 1 to 72 of 72 are 94.44 pct identical to residues 1 to 72 of 72 from GenPept 118 : gi|1787856|gb|AAC74646.1| (AE000253) orf, hypothetical protein [Escherichia coli].


ensembl_gene_id: Z2045
symbol: Z2045
gene_biotype: protein_coding
description:
  Similar to DicA, regulator of DicB encoded by prophage CP-933O; Residues 2 to 132 of 135 are 63.35 pct identical to residues 4 to 132 of 135 from GenPept 118 : gi|1787853|gb|AAC74643.1| (AE000253) regulator of dicB [Escherichia coli].


ensembl_gene_id: Z2046
symbol: Z2046
gene_biotype: protein_coding
description:
  Putative regulator of cell division encoded by prophage CP-933O; Residues 1 to 74 of 75 are 82.66 pct identical to residues 1 to 75 of 76 from GenPept 118 : gi|1787852|gb|AAC74642.1| (AE000253) regulator of dicB [Escherichia coli].


ensembl_gene_id: Z2047
symbol: Z2047
gene_biotype: protein_coding
description:
  Unknown protein encoded by prophage CP-933O; Residues 1 to 93 of 183 are 87.09 pct identical to residues 1 to 93 of 96 from GenPept 118 : gi|1787851|gb|AAC74641.1| (AE000253) orf, hypothetical protein [Escherichia coli].


ensembl_gene_id: Z2048
symbol: Z2048
gene_biotype: protein_coding
description:
  Unknown protein encoded by prophage CP-933O; Residues 184 to 266 of 346 are 51.80 pct identical to residues 78 to 153 of 179 from GenPept 118 : gi|1790824|gb|AAC77318.1| (AE000507) DNA biosynthesis; primosomal protein i [Escherichia coli].


ensembl_gene_id: Z2049
symbol: Z2049
gene_biotype: protein_coding
description:
  Unknown protein encoded by prophage CP-933O; Residues 93 to 221 of 221 are 48.83 pct identical to residues 102 to 229 of 229 from GenPept 118 : gi|14808|emb|CAA31475.1| (X13065) gene 14 (AA 1 - 229) [Bacteriophage phi-80].


ensembl_gene_id: Z2051
symbol: Z2051
gene_biotype: protein_coding
description:
  Unknown protein encoded by prophage CP-933O; Residues 1 to 96 of 193 are 87.99 pct identical to residues 69 to 168 of 203 from GenPept 118 : gi|1787624|gb|AAC74443.1| (AE000233) orf, hypothetical protein [Escherichia coli].


ensembl_gene_id: Z2053
symbol: paa
gene_biotype: protein_coding
description:
  Putative intestinal colonization factor encoded by prophage CP-933O; Residues 1 to 252 of 252 are 100.00 pct identical to residues 3 to 254 of 258 from GenPept 118 : gi|6715555|gb|AAB48445.2| (U82533) Anm [Escherichia coli].


ensembl_gene_id: Z2054
symbol: Z2054
gene_biotype: protein_coding
description:
  Putative killer protein encoded by prophage CP-933O; Residues 1 to 69 of 70 are 79.71 pct identical to residues 1 to 69 of 69 from GenPept 118 : gi|1786200|gb|AAC73129.1| (AE000112) Gef protein interferes with membrane function when in excess [Escherichia coli].


ensembl_gene_id: Z2055
symbol: Z2055
gene_biotype: protein_coding
description:
  Unknown protein encoded by prophage CP-933O; Residues 1 to 83 of 85 are 72.28 pct identical to residues 2 to 80 of 83 from GenPept 118 : gi|1787844|gb|AAC74634.1| (AE000253) orf, hypothetical protein [Escherichia coli].


ensembl_gene_id: Z2056
symbol: Z2056
gene_biotype: protein_coding
description:
  Unknown protein encoded by prophage CP-933O; Residues 4 to 326 of 327 are 85.80 pct identical to residues 38 to 361 of 362 from GenPept 118 : gi|1787843|gb|AAC74633.1| (AE000253) orf, hypothetical protein [Escherichia coli].


ensembl_gene_id: Z2057
symbol: Z2057
gene_biotype: protein_coding
description:
  Putative endonuclease of prophage CP-933O; Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC; Belongs to the rusA family.


ensembl_gene_id: Z2059
symbol: Z2059
gene_biotype: protein_coding
description:
  Unknown protein encoded by prophage CP-933O; Residues 42 to 104 of 106 are 98.41 pct identical to residues 1 to 63 of 65 from GenPept 118 : gi|8346569|emb|CAB93762.1| (AJ249351) hypothetical protein [Bacteriophage P27].


ensembl_gene_id: Z2060
symbol: Z2060
gene_biotype: protein_coding
description:
  Putative DNA adenine methyltransferase encoded by prophage CP-933O; Residues 41 to 352 of 352 are 85.89 pct identical to residues 1 to 312 of 312 from GenPept 118 : gi|8346570|emb|CAB93763.1| (AJ249351) hypothetical protein [Bacteriophage P27]; Belongs to the N(4)/N(6)-methyltransferase family.


ensembl_gene_id: Z2065
symbol: Z2065
gene_biotype: protein_coding
description:
  Similar to conserved hypothetical phage protein YjhS encoded within prophage CP-933O; Residues 1 to 237 of 316 are 72.11 pct identical to residues 1 to 251 of 636 from GenPept 118 : gi|6759965|gb|AAF28123.1|AF153317_19 (AF153317) YjhS [Shigella dysenteriae].


ensembl_gene_id: Z2066
symbol: Z2066
gene_biotype: protein_coding
description:
  Unknown protein encoded by prophage CP-933O; Residues 1 to 235 of 290 are 41.26 pct identical to residues 326 to 572 of 645 from GenPept 118 : gi|4585419|gb|AAD25447.1|AF125520_42 (AF125520) hypothetical protein [Bacteriophage 933W].


ensembl_gene_id: Z2069
symbol: Z2069
gene_biotype: protein_coding
description:
  Putative holin protein of prophage CP-933O; Residues 1 to 68 of 68 are 97.05 pct identical to residues 1 to 68 of 68 from GenPept 118 : gi|2668771|gb|AAD04658.1| (AF034975) putative holin protein [Bacteriophage H-19B].


ensembl_gene_id: Z2070
symbol: Z2070
gene_biotype: protein_coding
description:
  Unknown protein encoded by prophage CP-933O; Residues 2 to 75 of 115 are 47.29 pct identical to residues 1 to 74 of 103 from GenPept 118 : gi|1787837|gb|AAC74628.1| (AE000252) orf, hypothetical protein [Escherichia coli].


ensembl_gene_id: Z2071
symbol: Z2071
gene_biotype: protein_coding
description:
  Putative endolysin of prophage CP933-O; Residues 1 to 73 of 76 are 93.15 pct identical to residues 1 to 73 of 177 from GenPept 118 : gi|4335686|gb|AAD17382.1| (AF034975) R protein [Bacteriophage H-19B].


ensembl_gene_id: Z2072
symbol: Z2072
gene_biotype: protein_coding
description:
  Putative IS encoded proteinen coded by prophage CP-933O; Residues 1 to 115 of 115 are 100.00 pct identical to residues 1 to 115 of 115 from GenPept 118 : gi|3661485|gb|AAC61716.1| (AF081284) Hp4 [Escherichia coli].


ensembl_gene_id: Z2073
symbol: Z2073
gene_biotype: protein_coding
description:
  Putative transposase within CP-933O; Residues 1 to 215 of 215 are 99.53 pct identical to residues 82 to 296 of 296 from GenPept 118 : gi|3822179|gb|AAC70133.1| (AF074613) transposase [Escherichia coli O157:H7].


ensembl_gene_id: Z2074
symbol: Z2074
gene_biotype: protein_coding
description:
  Putative IS encoded protein within CP-933O; Residues 1 to 108 of 108 are 99.07 pct identical to residues 1 to 108 of 108 from GenPept 118 : gi|3822180|gb|AAC70134.1| (AF074613) hypothetical protein [Escherichia coli O157:H7].


ensembl_gene_id: Z2075
symbol: Z2075
gene_biotype: protein_coding
description:
  Unknown protein encoded by prophage CP-933O; Residues 52 to 152 of 164 are 39.04 pct identical to residues 12 to 116 of 140 from GenPept 118 : gi|4126792|dbj|BAA36750.1| (AB016764) ORF4 [Escherichia coli].


ensembl_gene_id: Z2077
symbol: Z2077
gene_biotype: protein_coding
description:
  Unknown protein encoded by prophage CP-933O; Residues 1 to 203 of 215 are 41.17 pct identical to residues 1 to 203 of 216 from GenPept 118 : gi|4126790|dbj|BAA36748.1| (AB016764) ORF2 [Escherichia coli].


ensembl_gene_id: Z2079
symbol: Z2079
gene_biotype: protein_coding
description:
  Putative IS encoded protein within CP-933O; Residues 1 to 135 of 136 are 99.25 pct identical to residues 341 to 475 of 512 from GenPept 118 : gi|3414883|gb|AAC31494.1| (AF071034) L0015 [Escherichia coli].


ensembl_gene_id: Z2080
symbol: Z2080
gene_biotype: protein_coding
description:
  Putative IS encoded protein within CP-933O; Residues 1 to 134 of 230 are 98.50 pct identical to residues 11 to 144 of 512 from GenPept 118 : gi|3414883|gb|AAC31494.1| (AF071034) L0015 [Escherichia coli].


ensembl_gene_id: Z2081
symbol: Z2081
gene_biotype: protein_coding
description:
  Putative IS encoded protein within CP-933O; Residues 1 to 115 of 115 are 100.00 pct identical to residues 1 to 115 of 115 from GenPept 118 : gi|3661485|gb|AAC61716.1| (AF081284) Hp4 [Escherichia coli].


ensembl_gene_id: Z2083
symbol: Z2083
gene_biotype: protein_coding
description:
  Unknown protein encoded within CP-933O; Residues 40 to 109 of 111 are 38.57 pct identical to residues 9 to 76 of 79 from GenPept 118 : gi|5738236|gb|AAD50308.1|AF175466_2 (AF175466) DNA damage-inducible protein DinI [Serratia marcescens].


ensembl_gene_id: Z2084
symbol: Z2084
gene_biotype: protein_coding
description:
  Putative integrase within CP-933O; Residues 1 to 155 of 155 are 94.19 pct identical to residues 244 to 398 of 398 from GenPept 118 : gi|1787861|gb|AAC74651.1| (AE000253) putative transposase [Escherichia coli].


ensembl_gene_id: Z2085
symbol: Z2085
gene_biotype: protein_coding
description:
  Putative exonuclease VIII within CP-933O; Residues 60 to 409 of 414 are 57.38 pct identical to residues 52 to 393 of 866 from GenPept 118 : gi|1787612|gb|AAC74432.1| (AE000232) exonuclease VIII, ds DNA exonuclease, 5' --> 3' specific [Escherichia coli].


ensembl_gene_id: Z2086
symbol: Z2086
gene_biotype: protein_coding
description:
  Similar to division inhibition protein DicB within CP-933O; Residues 36 to 90 of 97 are 67.27 pct identical to residues 1 to 55 of 62 from GenPept 118 : gi|41280|emb|CAA30351.1| (X07465) DicB protein [Escherichia coli].


ensembl_gene_id: Z2089
symbol: Z2089
gene_biotype: protein_coding
description:
  Unknown protein encoded within CP-933O; Residues 28 to 76 of 77 are 87.75 pct identical to residues 1 to 49 of 51 from GenPept 118 : gi|1787854|gb|AAC74644.1| (AE000253) orf, hypothetical protein [Escherichia coli].


ensembl_gene_id: Z2090
symbol: Z2090
gene_biotype: protein_coding
description:
  Putative repressor protein encoded within prophage CP-933O; Residues 1 to 204 of 212 are 28.01 pct identical to residues 1 to 206 of 216 from GenPept 118 : gi|8439602|gb|AAF75024.1| (AF217253) repressor protein [Bacteriophage P22]; Belongs to the peptidase S24 family.


ensembl_gene_id: Z2091
symbol: Z2091
gene_biotype: protein_coding
description:
  Unknown protein encoded within prophage CP-933O; Residues 5 to 57 of 84 are 47.16 pct identical to residues 1 to 53 of 61 from GenPept 118 : gi|8439603|gb|AAF75025.1| (AF217253) antirepressor [Bacteriophage P22].


ensembl_gene_id: Z2092
symbol: Z2092
gene_biotype: protein_coding
description:
  Unknown protein encoded within prophage CP-933O; Residues 1 to 141 of 141 are 30.55 pct identical to residues 1 to 140 of 140 from GenPept 118 : gi|1787621|gb|AAC74440.1| (AE000233) orf, hypothetical protein [Escherichia coli].


ensembl_gene_id: Z2093
symbol: Z2093
gene_biotype: protein_coding
description:
  Unknown protein encoded within prophage CP-933O; Residues 199 to 293 of 347 are 49.47 pct identical to residues 85 to 173 of 179 from GenPept 118 : gi|1790824|gb|AAC77318.1| (AE000507) DNA biosynthesis; primosomal protein i [Escherichia coli].


ensembl_gene_id: Z2094
symbol: Z2094
gene_biotype: protein_coding
description:
  Unknown protein encoded within prophage CP-933O; Residues 92 to 220 of 220 are 45.73 pct identical to residues 102 to 229 of 229 from GenPept 118 : gi|14808|emb|CAA31475.1| (X13065) gene 14 (AA 1 - 229) [Bacteriophage phi-80].


ensembl_gene_id: Z2095
symbol: Z2095
gene_biotype: protein_coding
description:
  Unknown protein encoded within prophage CP-933O; Residues 1 to 82 of 85 are 41.48 pct identical to residues 18 to 111 of 203 from GenPept 118 : gi|1787624|gb|AAC74443.1| (AE000233) orf, hypothetical protein [Escherichia coli].


ensembl_gene_id: Z2096
symbol: Z2096
gene_biotype: protein_coding
description:
  Unknown protein encoded within prophage CP-933O; Residues 4 to 61 of 160 are 79.31 pct identical to residues 111 to 168 of 203 from GenPept 118 : gi|1787624|gb|AAC74443.1| (AE000233) orf, hypothetical protein [Escherichia coli].


ensembl_gene_id: Z2098
symbol: Z2098
gene_biotype: protein_coding
description:
  Unknown protein encoded within prophage CP-933O; Residues 109 to 185 of 185 are 67.94 pct identical to residues 129 to 206 of 207 from GenPept 118 : gi|4585382|gb|AAD25410.1|AF125520_5 (AF125520) hypothetical protein [Bacteriophage 933W].


ensembl_gene_id: Z2099
symbol: Z2099
gene_biotype: protein_coding
description:
  Unknown protein encoded within prophage CP-933O; Residues 1 to 114 of 114 are 99.12 pct identical to residues 1 to 114 of 114 from GenPept 118 : gi|4585451|gb|AAD25479.1|AF125520_74 (AF125520) hypothetical protein [Bacteriophage 933W].


ensembl_gene_id: Z2100
symbol: Z2100
gene_biotype: protein_coding
description:
  Unknown protein encoded within prophage CP-933O; ; similar to [SwissProt Accession Number Q06262] [Escherichia coli].


ensembl_gene_id: Z2101
symbol: Z2101
gene_biotype: protein_coding
description:
  Putative endonuclease encoded within prophage CP-933O; Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC; Belongs to the rusA family.


ensembl_gene_id: Z2103
symbol: Z2103
gene_biotype: protein_coding
description:
  Unknown protein encoded within prophage CP-933O; Residues 30 to 92 of 94 are 96.82 pct identical to residues 1 to 63 of 65 from GenPept 118 : gi|8346569|emb|CAB93762.1| (AJ249351) hypothetical protein [Bacteriophage P27].


ensembl_gene_id: Z2104
symbol: Z2104
gene_biotype: protein_coding
description:
  Putative ARAC-type regulatory protein of CP-933O; Residues 1 to 229 of 237 are 34.33 pct identical to residues 1 to 233 of 242 from GenPept 118 : gi|1789932|gb|AAC76540.1| (AE000428) putative ARAC-type regulatory protein [Escherichia coli].


ensembl_gene_id: Z2108
symbol: Z2108
gene_biotype: protein_coding
description:
  Hypothetical phage protein similar to YjhS encoded within prophage CP-933O; Residues 1 to 298 of 316 are 69.55 pct identical to residues 1 to 311 of 636 from GenPept 118 : gi|6759965|gb|AAF28123.1|AF153317_19 (AF153317) YjhS [Shigella dysenteriae].


ensembl_gene_id: Z2109
symbol: Z2109
gene_biotype: protein_coding
description:
  Hypothetical phage protein similar to YjhS encoded within prophage CP-933O; Residues 1 to 301 of 304 are 39.37 pct identical to residues 326 to 640 of 645 from GenPept 118 : gi|4585419|gb|AAD25447.1|AF125520_42 (AF125520) hypothetical protein [Bacteriophage 933W].


ensembl_gene_id: Z2110
symbol: Z2110
gene_biotype: protein_coding
description:
  Putative transposase encoded within prophage CP-933O; Residues 1 to 108 of 108 are 100.00 pct identical to residues 1 to 108 of 108 from GenPept 118 : gi|3822180|gb|AAC70134.1| (AF074613) hypothetical protein [Escherichia coli O157:H7].


ensembl_gene_id: Z2111
symbol: Z2111
gene_biotype: protein_coding
description:
  Putative transposase encoded within prophage CP-933O; Residues 1 to 215 of 215 are 99.06 pct identical to residues 82 to 296 of 296 from GenPept 118 : gi|3822179|gb|AAC70133.1| (AF074613) transposase [Escherichia coli O157:H7].


ensembl_gene_id: Z2112
symbol: Z2112
gene_biotype: protein_coding
description:
  Putative ClpP-like protease encoded within prophage CP-933O; Residues 12 to 152 of 265 are 43.26 pct identical to residues 83 to 222 of 296 from GenPept 118 : gi|5059251|gb|AAD38956.1| (AF147978) putative ClpP protease [Bacteriophage D3].


ensembl_gene_id: Z2113
symbol: Z2113
gene_biotype: protein_coding
description:
  Unknown protein encoded within prophage CP-933O; Residues 24 to 155 of 168 are 28.35 pct identical to residues 292 to 425 of 472 from GenPept 118 : gi|6723246|dbj|BAA89642.1| (AB036666) similar to portal protein GPB of phage lambda [Wolbachia sp. wKue].


ensembl_gene_id: Z2116
symbol: Z2116
gene_biotype: protein_coding
description:
  Residues 4 to 407 of 502 are 26.27 pct identical to residues 31 to 394 of 609 from GenPept 118 : gi|6723244|dbj|BAA89640.1| (AB036666) similar to terminase large subunit of phage lambda [Wolbachia sp. wKue].


ensembl_gene_id: Z2118
symbol: Z2118
gene_biotype: protein_coding
description:
  Putative endopeptidase Rz of prophage CP-933O; Residues 1 to 155 of 155 are 90.96 pct identical to residues 1 to 155 of 155 from GenPept 118 : gi|5881639|dbj|BAA84330.1| (AP000363) Rz [Bacteriophage VT2-Sa].


ensembl_gene_id: Z2120
symbol: Z2120
gene_biotype: protein_coding
description:
  Putative endolysin of prophage CP-933O; Residues 1 to 177 of 177 are 94.35 pct identical to residues 1 to 177 of 177 from GenPept 118 : gi|4335686|gb|AAD17382.1| (AF034975) R protein [Bacteriophage H-19B].


ensembl_gene_id: Z2122
symbol: Z2122
gene_biotype: protein_coding
description:
  Putative holin protein of prophage CP-933O; Residues 1 to 68 of 68 are 95.58 pct identical to residues 1 to 68 of 68 from GenPept 118 : gi|2668771|gb|AAD04658.1| (AF034975) putative holin protein [Bacteriophage H-19B].


ensembl_gene_id: Z2127
symbol: Z2127
gene_biotype: protein_coding
description:
  Putative IS encoded protein encoded within prophage CP-933O; Residues 72 to 186 of 186 are 100.00 pct identical to residues 1 to 115 of 115 from GenPept 118 : gi|3661485|gb|AAC61716.1| (AF081284) Hp4 [Escherichia coli].


ensembl_gene_id: Z2130
symbol: Z2130
gene_biotype: protein_coding
description:
  Putative IS encoded protein encoded within prophage CP-933O; Residues 1 to 512 of 512 are 100.00 pct identical to residues 1 to 512 of 512 from GenPept 118 : gi|3414883|gb|AAC31494.1| (AF071034) L0015 [Escherichia coli].


ensembl_gene_id: Z2131
symbol: Z2131
gene_biotype: protein_coding
description:
  Putative terminase large subunit of prophage CP-933O; Residues 18 to 654 of 654 are 91.99 pct identical to residues 6 to 642 of 642 from GenPept 118 : gi|215456|gb|AAA32340.1| (M81255) terminase large subunit [Bacteriophage 21].


ensembl_gene_id: Z2132
symbol: Z2132
gene_biotype: protein_coding
description:
  Putative head completion protein of prophage CP-933O; Residues 1 to 46 of 46 are 95.65 pct identical to residues 23 to 68 of 68 from GenPept 118 : gi|215457|gb|AAA32341.1| (M81255) head completion protein gp3 [Bacteriophage 21].


ensembl_gene_id: Z2133
symbol: Z2133
gene_biotype: protein_coding
description:
  Putative capsid assembly protein of prophage CP-933O; Residues 1 to 530 of 530 are 98.30 pct identical to residues 1 to 530 of 530 from GenPept 118 : gi|215458|gb|AAA32342.1| (M81255) head-tail preconnector gp5 [Bacteriophage 21].


ensembl_gene_id: Z2134
symbol: Z2134
gene_biotype: protein_coding
description:
  Putative head-tail preconnector protein of prophage CP-933O; Residues 1 to 501 of 501 are 98.00 pct identical to residues 1 to 501 of 501 from GenPept 118 : gi|215459|gb|AAA32343.1| (M81255) head-tail preconnector gp5 [Bacteriophage 21].


ensembl_gene_id: Z2135
symbol: Z2135
gene_biotype: protein_coding
description:
  Putative capsid protein small subunit of prophage CP-933O; Residues 1 to 115 of 115 are 95.65 pct identical to residues 1 to 115 of 115 from GenPept 118 : gi|215461|gb|AAA32345.1| (M81255) capsid protein small subunit [Bacteriophage 21].


ensembl_gene_id: Z2136
symbol: Z2136
gene_biotype: protein_coding
description:
  Partial putative major capsid protein of prophage CP-933O; Residues 1 to 88 of 88 are 95.45 pct identical to residues 1 to 88 of 342 from GenPept 118 : gi|215462|gb|AAA32346.1| (M81255) major capsid protein [Bacteriophage 21].


ensembl_gene_id: Z2137
symbol: Z2137
gene_biotype: protein_coding
description:
  Putative tail component of prophage CP-933O; Residues 1 to 203 of 209 are 78.81 pct identical to residues 42 to 244 of 246 from GenPept 118 : gi|215117|gb|AAA96545.1| (J02459) V (tail component;256) [bacteriophage lambda].


ensembl_gene_id: Z2138
symbol: Z2138
gene_biotype: protein_coding
description:
  Putative tail component of prophage CP-933O; Residues 25 to 167 of 167 are 68.05 pct identical to residues 1 to 140 of 140 from GenPept 118 : gi|215118|gb|AAA96546.1| (J02459) G (tail component;140) [bacteriophage lambda].


ensembl_gene_id: Z2139
symbol: Z2139
gene_biotype: protein_coding
description:
  Putative tail component of prophage CP-933O; Residues 1 to 132 of 137 are 71.96 pct identical to residues 16 to 143 of 144 from GenPept 118 : gi|215119|gb|AAA96547.1| (J02459) T (tail component;144) [bacteriophage lambda].


ensembl_gene_id: Z2140
symbol: Z2140
gene_biotype: protein_coding
description:
  Putative tail component of prophage CP-933O; Residues 1 to 859 of 859 are 77.64 pct identical to residues 1 to 853 of 853 from GenPept 118 : gi|215120|gb|AAA96548.1| (J02459) H (tail component;853) [bacteriophage lambda].


ensembl_gene_id: Z2141
symbol: Z2141
gene_biotype: protein_coding
description:
  Putative tail component of prophage CP-933O; Residues 1 to 109 of 109 are 79.81 pct identical to residues 1 to 109 of 109 from GenPept 118 : gi|215121|gb|AAA96549.1| (J02459) M (tail component;109) [bacteriophage lambda].


ensembl_gene_id: Z2142
symbol: Z2142
gene_biotype: protein_coding
description:
  Putative tail component of prophage CP-933O; Residues 1 to 232 of 232 are 76.72 pct identical to residues 1 to 232 of 232 from GenPept 118 : gi|215122|gb|AAA96550.1| (J02459) L (tail component;232) [bacteriophage lambda].


ensembl_gene_id: Z2143
symbol: Z2143
gene_biotype: protein_coding
description:
  Putative tail component of prophage CP-933O; Residues 95 to 290 of 293 are 86.22 pct identical to residues 1 to 196 of 199 from GenPept 118 : gi|215123|gb|AAA96551.1| (J02459) K (tail component;199) [bacteriophage lambda].


ensembl_gene_id: Z2144
symbol: Z2144
gene_biotype: protein_coding
description:
  Putative tail component of prophage CP-933O; Residues 1 to 224 of 225 are 69.33 pct identical to residues 1 to 223 of 223 from GenPept 118 : gi|215124|gb|AAA96552.1| (J02459) I (tail component;223) [bacteriophage lambda].


ensembl_gene_id: Z2145
symbol: Z2145
gene_biotype: protein_coding
description:
  Putative tail component of prophage CP-933O; Residues 1 to 1157 of 1158 are 70.06 pct identical to residues 1 to 1131 of 1132 from GenPept 118 : gi|215125|gb|AAA96553.1| (J02459) J (tail:host specificity;1132) [bacteriophage lambda].


ensembl_gene_id: Z2146
symbol: Z2146
gene_biotype: protein_coding
description:
  Putative outer membrane protein Lom precursor of prophage CP-933O; Residues 1 to 199 of 199 are 68.84 pct identical to residues 1 to 199 of 199 from GenPept 118 : gi|7532789|gb|AAF63231.1|AF151091_2 (AF151091) Lom [prophage P-EibA].


ensembl_gene_id: Z2147
symbol: Z2147
gene_biotype: protein_coding
description:
  Putative tail fiber protein of prophage CP-933O; Residues 177 to 439 of 439 are 74.24 pct identical to residues 400 to 645 of 645 from GenPept 118 : gi|4585436|gb|AAD25464.1|AF125520_59 (AF125520) putative tail fiber protein [Bacteriophage 933W].


ensembl_gene_id: Z2148
symbol: Z2148
gene_biotype: protein_coding
description:
  Unknown protein encoded within prophage CP-933O; Residues 1 to 89 of 89 are 94.38 pct identical to residues 41 to 129 of 129 from GenPept 118 : gi|4585437|gb|AAD25465.1|AF125520_60 (AF125520) hypothetical protein [Bacteriophage 933W].


ensembl_gene_id: Z2149
symbol: nleG2-3
gene_biotype: protein_coding
description:
  Hypothetical protein; Residues 72 to 187 of 191 are 34.18 pct identical to residues 20 to 136 of 140 from GenPept 118 : gi|4126792|dbj|BAA36750.1| (AB016764) ORF4 [Escherichia coli].


ensembl_gene_id: Z2150
symbol: nleG6-2
gene_biotype: protein_coding
description:
  Hypothetical protein; Residues 72 to 206 of 209 are 91.11 pct identical to residues 1 to 135 of 140 from GenPept 118 : gi|4126792|dbj|BAA36750.1| (AB016764) ORF4 [Escherichia coli].


ensembl_gene_id: Z2151
symbol: nleG5-2
gene_biotype: protein_coding
description:
  Hypothetical protein; Residues 80 to 210 of 213 are 43.51 pct identical to residues 8 to 136 of 140 from GenPept 118 : gi|4126792|dbj|BAA36750.1| (AB016764) ORF4 [Escherichia coli].


ensembl_gene_id: Z2152
symbol: Z2152
gene_biotype: protein_coding
description:
  Hypothetical protein; Residues 40 to 109 of 115 are 38.57 pct identical to residues 9 to 76 of 79 from GenPept 118 : gi|5738236|gb|AAD50308.1|AF175466_2 (AF175466) DNA damage-inducible protein DinI [Serratia marcescens].


ensembl_gene_id: Z2153
symbol: ydfJ
gene_biotype: protein_coding
description:
  Putative transport protein; Residues 1 to 427 of 427 are 99.53 pct identical to residues 1 to 427 of 427 from Escherichia coli K-12 Strain MG1655: B1543.


ensembl_gene_id: Z2155
symbol: ydfI
gene_biotype: protein_coding
description:
  Putative oxidoreductase; Residues 1 to 486 of 486 are 98.14 pct identical to residues 1 to 486 of 486 from Escherichia coli K-12 Strain MG1655: B1542; Belongs to the mannitol dehydrogenase family.


ensembl_gene_id: Z2156
symbol: ydfZ
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 67 of 67 are 100.00 pct identical to residues 1 to 67 of 67 from Escherichia coli K-12 Strain MG1655: B1541.


ensembl_gene_id: Z2157
symbol: ydfH
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 228 of 228 are 100.00 pct identical to residues 1 to 228 of 228 from Escherichia coli K-12 Strain MG1655: B1540.


ensembl_gene_id: Z2158
symbol: ydfG
gene_biotype: protein_coding
description:
  Putative oxidoreductase; NADP-dependent dehydrogenase with broad substrate specificity acting on 3-hydroxy acids. Catalyzes the NADP-dependent oxidation of L- allo-threonine to L-2-amino-3-keto-butyrate, which is spontaneously decarboxylated into aminoacetone. Also acts on D-threonine, L-serine, D-serine, D-3-hydroxyisobutyrate, L-3-hydroxyisobutyrate, D-glycerate and L-glycerate. Able to catalyze the reduction of the malonic semialdehyde to 3-hydroxypropionic acid. YdfG is apparently supplementing RutE, the presumed malonic semialdehyde reductase involved in pyrimidine degradation sin [...]


ensembl_gene_id: Z2160
symbol: dcp
gene_biotype: protein_coding
description:
  Dipeptidyl carboxypeptidase II; Residues 1 to 681 of 681 are 99.26 pct identical to residues 1 to 681 of 681 from Escherichia coli K-12 Strain MG1655: B1538.


ensembl_gene_id: Z2161
symbol: ydeJ
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 172 of 172 are 98.83 pct identical to residues 1 to 172 of 172 from Escherichia coli K-12 Strain MG1655: B1537; Belongs to the CinA family.


ensembl_gene_id: Z2162
symbol: ydeI
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 130 of 130 are 97.69 pct identical to residues 1 to 130 of 130 from Escherichia coli K-12 Strain MG1655: B1536.


ensembl_gene_id: Z2163
symbol: ydeH
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 296 of 296 are 98.64 pct identical to residues 1 to 296 of 296 from Escherichia coli K-12 Strain MG1655: B1535.


ensembl_gene_id: Z2164
symbol: ftrA
gene_biotype: protein_coding
description:
  Hypothetical protein; Residues 3 to 324 of 327 are 41.30 pct identical to residues 15 to 336 of 398 from GenPept 118 : gi|7544056|emb|CAB87229.1| (AL163641) araC-family transcriptional regulator [Streptomyces coelicolor A3(2)].


ensembl_gene_id: Z2166
symbol: ydeF
gene_biotype: protein_coding
description:
  Putative transport protein; Residues 1 to 395 of 395 are 96.70 pct identical to residues 1 to 395 of 395 from Escherichia coli K-12 Strain MG1655: B1534.


ensembl_gene_id: Z2168
symbol: ydeD
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 264 of 266 are 95.83 pct identical to residues 1 to 264 of 266 from Escherichia coli K-12 Strain MG1655: B1533.


ensembl_gene_id: Z2169
symbol: marB
gene_biotype: protein_coding
description:
  Multiple antibiotic resistance protein; Residues 1 to 72 of 72 are 90.27 pct identical to residues 1 to 72 of 72 from Escherichia coli K-12 Strain MG1655: B1532.


ensembl_gene_id: Z2170
symbol: marA
gene_biotype: protein_coding
description:
  Multiple antibiotic resistance; May be a transcriptional activator of genes involved in the multiple antibiotic resistance (Mar) phenotype. It can also activate genes such as sodA, zwf and micF (By similarity).


ensembl_gene_id: Z2171
symbol: marR
gene_biotype: protein_coding
description:
  Multiple antibiotic resistance protein; Residues 1 to 125 of 125 are 98.40 pct identical to residues 1 to 125 of 125 from Escherichia coli K-12 Strain MG1655: B1530.


ensembl_gene_id: Z2172
symbol: ydeB
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 221 of 221 are 99.09 pct identical to residues 1 to 221 of 221 from Escherichia coli K-12 Strain MG1655: B1529.


ensembl_gene_id: Z2173
symbol: ydeA
gene_biotype: protein_coding
description:
  Putative resistance / regulatory protein; Involved in the efflux of sugars. The physiological role may be the reduction of the intracellular concentration of toxic sugars or sugar metabolites; Belongs to the major facilitator superfamily. SotB (TC 2.A.1.2) family.


ensembl_gene_id: Z2175
symbol: Z2175
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 89 of 89 are 94.38 pct identical to residues 283 to 371 of 371 from Escherichia coli K-12 Strain MG1655: B1527.


ensembl_gene_id: Z2176
symbol: Z2176
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 262 of 262 are 99.61 pct identical to residues 1 to 262 of 371 from Escherichia coli K-12 Strain MG1655: B1527.


ensembl_gene_id: Z2177
symbol: yneJ
gene_biotype: protein_coding
description:
  Putative transcriptional regulator LYSR-type; Residues 1 to 293 of 293 are 96.92 pct identical to residues 1 to 293 of 293 from Escherichia coli K-12 Strain MG1655: B1526; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: Z2178
symbol: yneI
gene_biotype: protein_coding
description:
  Putative aldehyde dehydrogenase; Residues 1 to 470 of 470 are 99.36 pct identical to residues 1 to 470 of 470 from Escherichia coli K-12 Strain MG1655: B1525.


ensembl_gene_id: Z2179
symbol: yneH
gene_biotype: protein_coding
description:
  Putative glutaminase; Residues 1 to 308 of 308 are 100.00 pct identical to residues 1 to 308 of 308 from Escherichia coli K-12 Strain MG1655: B1524; Belongs to the glutaminase family.


ensembl_gene_id: Z2180
symbol: yneG
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 119 of 119 are 99.15 pct identical to residues 1 to 119 of 119 from Escherichia coli K-12 Strain MG1655: B1523.


ensembl_gene_id: Z2184
symbol: uxaB
gene_biotype: protein_coding
description:
  Altronate oxidoreductase; Residues 1 to 483 of 483 are 99.58 pct identical to residues 1 to 483 of 483 from Escherichia coli K-12 Strain MG1655: B1521; Belongs to the mannitol dehydrogenase family. UxaB subfamily.


ensembl_gene_id: Z2185
symbol: yneE
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 321 of 321 are 99.37 pct identical to residues 1 to 321 of 321 from Escherichia coli K-12 Strain MG1655: B1520.


ensembl_gene_id: Z2186
symbol: tam
gene_biotype: protein_coding
description:
  Putative enzyme; Catalyzes the S-adenosylmethionine monomethyl esterification of trans-aconitate at high affinity and of cis-aconitate, isocitrate, and citrate at lower velocities and affinities; Belongs to the methyltransferase superfamily. Tam family.


ensembl_gene_id: Z2187
symbol: lsrG
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Involved in the degradation of phospho-AI-2, thereby terminating induction of the lsr operon and closing the AI-2 signaling cycle. Catalyzes the conversion of (4S)-4-hydroxy-5- phosphonooxypentane-2,3-dione (P-DPD) to 3-hydroxy-5- phosphonooxypentane-2,4-dione (P-HPD); Belongs to the LsrG family.


ensembl_gene_id: Z2188
symbol: yneB
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Involved in the degradation of phospho-AI-2, thereby terminating induction of the lsr operon and closing the AI-2 signaling cycle. Catalyzes the transfer of an acetyl moiety from 3-hydroxy-5- phosphonooxypentane-2,4-dione to CoA to form glycerone phosphate and acetyl-CoA; Belongs to the DeoC/FbaB aldolase family.


ensembl_gene_id: Z2189
symbol: lsrB
gene_biotype: protein_coding
description:
  Putative LACI-type transcriptional regulator; Part of the ABC transporter complex LsrABCD involved in autoinducer 2 (AI-2) import. Binds AI-2 and delivers it to the LsrC and LsrD permeases (By similarity).


ensembl_gene_id: Z2190
symbol: ydeZ
gene_biotype: protein_coding
description:
  Putative transport system permease protein; Part of the ABC transporter complex LsrABCD involved in autoinducer 2 (AI-2) import. Probably responsible for the translocation of the substrate across the membrane (By similarity).


ensembl_gene_id: Z2192
symbol: lsrA
gene_biotype: protein_coding
description:
  Putative ATP-binding component of a transport system; Part of the ABC transporter complex LsrABCD involved in autoinducer 2 (AI-2) import. Responsible for energy coupling to the transport system (By similarity).


ensembl_gene_id: Z2193
symbol: ydeW
gene_biotype: protein_coding
description:
  Putative transcriptional regulator, sorC family; Regulates transcription of many different genes. In the absence of autoinducer 2 (AI-2), represses transcription of the lsrACDBFG operon and its own transcription. In the presence of AI-2, LsrR is inactivated by binding phospho-AI-2, leading to the transcription of the lsr genes (By similarity).


ensembl_gene_id: Z2194
symbol: ydeV
gene_biotype: protein_coding
description:
  Putative kinase; Catalyzes the phosphorylation of autoinducer-2 (AI-2) to phospho-AI-2, which subsequently inactivates the transcriptional regulator LsrR and leads to the transcription of the lsr operon. Phosphorylates the ring-open form of (S)-4,5-dihydroxypentane-2,3-dione (DPD), which is the precursor to all AI-2 signaling molecules, at the C5 position.


ensembl_gene_id: Z2195
symbol: ydeK
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 1320 of 1343 are 97.12 pct identical to residues 1 to 1320 of 1325 from Escherichia coli K-12 Strain MG1655: B1510.


ensembl_gene_id: Z2196
symbol: Z2196
gene_biotype: protein_coding
description:
  Putative ATP-binding component of a transport system and adhesin protein; Residues 1 to 466 of 466 are 98.71 pct identical to residues 1 to 466 of 466 from Escherichia coli K-12 Strain MG1655: B1509.


ensembl_gene_id: Z2197
symbol: hipA
gene_biotype: protein_coding
description:
  Persistence to inhibition of murein or DNA biosynthesis, DNA-binding regulator; Residues 1 to 340 of 340 are 97.94 pct identical to residues 101 to 440 of 440 from Escherichia coli K-12 Strain MG1655: B1507.


ensembl_gene_id: Z2199
symbol: Z2199
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 37 of 67 are 97.29 pct identical to residues 1 to 37 of 59 from Escherichia coli K-12 Strain MG1655: B1506.


ensembl_gene_id: Z2200
symbol: fmlA
gene_biotype: protein_coding
description:
  Putative major fimbrial subunit; Residues 1 to 186 of 187 are 64.70 pct identical to residues 1 to 181 of 182 from GenPept 118 : gi|1790769|gb|AAC77270.1| (AE000502) major type 1 subunit fimbrin (pilin) [Escherichia coli].


ensembl_gene_id: Z2201
symbol: fimC-2
gene_biotype: protein_coding
description:
  Putative fimbrial chaperone protein; Residues 34 to 239 of 239 are 67.63 pct identical to residues 21 to 227 of 227 from GenPept 118 : gi|572682|emb|CAA86604.1| (Z46635) focC [Escherichia coli].


ensembl_gene_id: Z2202
symbol: ydeT
gene_biotype: protein_coding
description:
  Putative outer membrane protein; Residues 1 to 382 of 382 are 98.42 pct identical to residues 1 to 382 of 382 from Escherichia coli K-12 Strain MG1655: B1505.


ensembl_gene_id: Z2203
symbol: Z2203
gene_biotype: protein_coding
description:
  Putative fimbrial usher protein; Residues 22 to 883 of 883 are 57.88 pct identical to residues 27 to 878 of 878 from Escherichia coli K-12 Strain MG1655: B4317.


ensembl_gene_id: Z2204
symbol: ydeS
gene_biotype: protein_coding
description:
  Putative fimbrial-like protein; Residues 1 to 176 of 176 are 99.43 pct identical to residues 1 to 176 of 176 from Escherichia coli K-12 Strain MG1655: B1504.


ensembl_gene_id: Z2205
symbol: ydeR
gene_biotype: protein_coding
description:
  Putative fimbrial-like protein; Residues 1 to 167 of 167 are 98.20 pct identical to residues 1 to 167 of 167 from Escherichia coli K-12 Strain MG1655: B1503.


ensembl_gene_id: Z2206
symbol: ydeQ
gene_biotype: protein_coding
description:
  Putative adhesin; Residues 1 to 304 of 304 are 98.35 pct identical to residues 1 to 304 of 304 from Escherichia coli K-12 Strain MG1655: B1502.


ensembl_gene_id: Z2207
symbol: ydeP
gene_biotype: protein_coding
description:
  Putative oxidoreductase, major subunit; Probably involved in acid resistance; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: Z2208
symbol: safA
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Connects the signal transduction between the two-component systems EvgS/EvgA and PhoQ/PhoP, by directly interacting with PhoQ and thus activating the PhoQ/PhoP system, in response to acid stress conditions; Belongs to the SafA family.


ensembl_gene_id: Z2209
symbol: Z2209
gene_biotype: protein_coding
description:
  Putative ARAC-type regulatory protein; Induces the expression of gadE and mdtEF. Could also regulate the expression of other genes involved in acid resistance (By similarity).


ensembl_gene_id: Z2210
symbol: ydeN
gene_biotype: protein_coding
description:
  Putative sulfatase; Residues 1 to 571 of 571 are 99.82 pct identical to residues 1 to 571 of 571 from Escherichia coli K-12 Strain MG1655: B1498.


ensembl_gene_id: Z2211
symbol: ydeM
gene_biotype: protein_coding
description:
  Putative enzyme; Residues 1 to 390 of 390 are 99.23 pct identical to residues 1 to 390 of 390 from Escherichia coli K-12 Strain MG1655: B1497.


ensembl_gene_id: Z2212
symbol: yddA
gene_biotype: protein_coding
description:
  Putative ATP-binding component of a transport system; Residues 1 to 561 of 561 are 99.10 pct identical to residues 1 to 561 of 561 from Escherichia coli K-12 Strain MG1655: B1496.


ensembl_gene_id: Z2213
symbol: yddB
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 790 of 790 are 98.86 pct identical to residues 1 to 790 of 790 from Escherichia coli K-12 Strain MG1655: B1495.


ensembl_gene_id: Z2214
symbol: pqqL
gene_biotype: protein_coding
description:
  Putative peptidase; Residues 1 to 931 of 931 are 99.24 pct identical to residues 1 to 931 of 931 from Escherichia coli K-12 Strain MG1655: B1494; Belongs to the peptidase M16 family.


ensembl_gene_id: Z2215
symbol: gadB
gene_biotype: protein_coding
description:
  Glutamate decarboxylase isozyme; Converts glutamate to gamma-aminobutyrate (GABA), consuming one intracellular proton in the reaction. The gad system helps to maintain a near-neutral intracellular pH when cells are exposed to extremely acidic conditions. The ability to survive transit through the acidic conditions of the stomach is essential for successful colonization of the mammalian host by commensal and pathogenic bacteria (By similarity).


ensembl_gene_id: Z2216
symbol: xasA
gene_biotype: protein_coding
description:
  Acid sensitivity protein, putative transporter; Involved in glutamate-dependent acid resistance. Imports glutamate inside the cell while simultaneously exporting to the periplasm the GABA produced by GadA and GadB. The gad system helps to maintain a near-neutral intracellular pH when cells are exposed to extremely acidic conditions. The ability to survive transit through the acidic conditions of the stomach is essential for successful colonization of the mammalian host by commensal and pathogenic bacteria (By similarity); Belongs to the amino acid-polyamine-organocation (APC) superfami [...]


ensembl_gene_id: Z2217
symbol: yddW
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 439 of 439 are 99.77 pct identical to residues 1 to 439 of 439 from Escherichia coli K-12 Strain MG1655: B1491.


ensembl_gene_id: Z2219
symbol: dosC
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Globin-coupled heme-based oxygen sensor protein displaying diguanylate cyclase (DGC) activity in response to oxygen availability. Thus, catalyzes the synthesis of cyclic diguanylate (c-di-GMP) via the condensation of 2 GTP molecules. Cyclic-di-GMP is a second messenger which controls cell surface-associated traits in bacteria (By similarity).


ensembl_gene_id: Z2220
symbol: Z2220
gene_biotype: protein_coding
description:
  Putative sensor kinase; Residues 1 to 416 of 421 are 99.03 pct identical to residues 1 to 416 of 807 from Escherichia coli K-12 Strain MG1655: B1489.


ensembl_gene_id: Z2221
symbol: Z2221
gene_biotype: protein_coding
description:
  Hypothetical protein; Residues 1 to 367 of 367 are 98.63 pct identical to residues 441 to 807 of 807 from Escherichia coli K-12 Strain MG1655: B1489.


ensembl_gene_id: Z2223
symbol: ddpA
gene_biotype: protein_coding
description:
  Putative hemin-binding lipoprotein; Residues 1 to 516 of 516 are 99.41 pct identical to residues 1 to 516 of 516 from Escherichia coli K-12 Strain MG1655: B1487.


ensembl_gene_id: Z2224
symbol: ddpB
gene_biotype: protein_coding
description:
  Putative transport system permease protein; Residues 1 to 326 of 326 are 99.38 pct identical to residues 15 to 340 of 340 from Escherichia coli K-12 Strain MG1655: B1486.


ensembl_gene_id: Z2225
symbol: ddpC
gene_biotype: protein_coding
description:
  Putative transport protein; Residues 1 to 298 of 298 are 99.66 pct identical to residues 1 to 298 of 298 from Escherichia coli K-12 Strain MG1655: B1485.


ensembl_gene_id: Z2226
symbol: ddpD
gene_biotype: protein_coding
description:
  Putative ATP-binding component of a transport system; Residues 1 to 328 of 328 are 98.47 pct identical to residues 1 to 328 of 328 from Escherichia coli K-12 Strain MG1655: B1484; Belongs to the ABC transporter superfamily.


ensembl_gene_id: Z2227
symbol: ddpF
gene_biotype: protein_coding
description:
  Putative ATP-binding component of a transport system; Residues 1 to 308 of 308 are 97.07 pct identical to residues 1 to 308 of 308 from Escherichia coli K-12 Strain MG1655: B1483; Belongs to the ABC transporter superfamily.


ensembl_gene_id: Z2228
symbol: osmC
gene_biotype: protein_coding
description:
  Osmotically inducible protein; Residues 1 to 143 of 143 are 99.30 pct identical to residues 1 to 143 of 143 from Escherichia coli K-12 Strain MG1655: B1482.


ensembl_gene_id: Z2229
symbol: bdm
gene_biotype: protein_coding
description:
  Hypothetical protein; Residues 1 to 92 of 92 are 98.91 pct identical to residues 1 to 92 of 92 from Escherichia coli K-12 Strain MG1655: B1481.


ensembl_gene_id: Z2230
symbol: rpsV
gene_biotype: protein_coding
description:
  30S ribosomal subunit protein S22; Although this protein associates with the 30S subunit of the ribosome it is not considered to be a bona fide ribosomal protein. Belongs to the SRA family.


ensembl_gene_id: Z2231
symbol: sfcA
gene_biotype: protein_coding
description:
  NAD-linked malate dehydrogenase (malic enzyme); Residues 1 to 574 of 574 are 99.47 pct identical to residues 1 to 574 of 574 from Escherichia coli K-12 Strain MG1655: B1479; Belongs to the malic enzymes family.


ensembl_gene_id: Z2232
symbol: adhP
gene_biotype: protein_coding
description:
  Alcohol dehydrogenase; Residues 1 to 345 of 346 are 99.42 pct identical to residues 1 to 345 of 346 from Escherichia coli K-12 Strain MG1655: B1478.


ensembl_gene_id: Z2233
symbol: yddM
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 120 of 120 are 97.50 pct identical to residues 1 to 120 of 120 from Escherichia coli K-12 Strain MG1655: B1477.


ensembl_gene_id: Z2234
symbol: fdnI
gene_biotype: protein_coding
description:
  Formate dehydrogenase-N, nitrate-inducible, cytochrome B556(Fdn) gamma subunit; Formate dehydrogenase allows the bacterium to use formate as major electron donor during anaerobic respiration, when nitrate is used as electron acceptor. Subunit gamma is the cytochrome b556 component of the formate dehydrogenase-N, and also contains a menaquinone reduction site that receives electrons from the beta subunit (FdnH), through its hemes. Formate dehydrogenase-N is part of a system that generates proton motive force, together with the dissimilatory nitrate reductase (Nar) (By similarity).


ensembl_gene_id: Z2235
symbol: fdnH
gene_biotype: protein_coding
description:
  Formate dehydrogenase-N, nitrate-inducible, iron-sulfur beta subunit; The beta chain is an electron transfer unit containing 4 cysteine clusters involved in the formation of iron-sulfur centers.


ensembl_gene_id: Z2236
symbol: fdnG
gene_biotype: protein_coding
description:
  Formate dehydrogenase-N, nitrate-inducible, alpha subunit; Residues 1 to 1015 of 1015 are 99.70 pct identical to residues 1 to 1015 of 1015 from Escherichia coli K-12 Strain MG1655: B1474.


ensembl_gene_id: Z2238
symbol: yddG
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 293 of 293 are 99.31 pct identical to residues 1 to 293 of 293 from Escherichia coli K-12 Strain MG1655: B1473.


ensembl_gene_id: Z2239
symbol: ompC-2
gene_biotype: protein_coding
description:
  Putative outer membrane porin protein; Residues 6 to 366 of 366 are 66.66 pct identical to residues 8 to 365 of 365 from GenPept 118 : gi|215369|gb|AAA32301.1| (J02580) outer membrane porin protein [Bacteriophage PA-2]; Belongs to the Gram-negative porin family.


ensembl_gene_id: Z2240
symbol: Z2240
gene_biotype: protein_coding
description:
  Hypothetical protein; Residues 41 to 160 of 167 are 35.83 pct identical to residues 3 to 119 of 532 from GenPept 118 : gi|152747|gb|AAA26526.1| (M32063) invasion plasmid antigen H [Shigella flexneri].


ensembl_gene_id: Z2241
symbol: Z2241
gene_biotype: protein_coding
description:
  Hypothetical protein; Residues 1 to 84 of 210 are 96.42 pct identical to residues 13 to 96 of 318 from Escherichia coli K-12 Strain MG1655: B1471.


ensembl_gene_id: Z2242
symbol: espR1
gene_biotype: protein_coding
description:
  Hypothetical protein; Residues 67 to 292 of 419 are 88.93 pct identical to residues 93 to 318 of 318 from Escherichia coli K-12 Strain MG1655: B1471.


ensembl_gene_id: Z2243
symbol: narU
gene_biotype: protein_coding
description:
  Nitrite extrusion protein 2; Residues 1 to 462 of 462 are 98.91 pct identical to residues 1 to 462 of 462 from Escherichia coli K-12 Strain MG1655: B1469.


ensembl_gene_id: Z2244
symbol: narZ
gene_biotype: protein_coding
description:
  Cryptic nitrate reductase 2, alpha subunit; Residues 1 to 1246 of 1246 are 99.19 pct identical to residues 1 to 1246 of 1246 from Escherichia coli K-12 Strain MG1655: B1468; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: Z2245
symbol: narY
gene_biotype: protein_coding
description:
  Cryptic nitrate reductase 2, beta subunit; Residues 1 to 514 of 514 are 99.61 pct identical to residues 1 to 514 of 514 from Escherichia coli K-12 Strain MG1655: B1467.


ensembl_gene_id: Z2246
symbol: narW
gene_biotype: protein_coding
description:
  Cryptic nitrate reductase 2, delta subunit, assembly function; Residues 1 to 231 of 231 are 98.70 pct identical to residues 1 to 231 of 231 from Escherichia coli K-12 Strain MG1655: B1466.


ensembl_gene_id: Z2247
symbol: narV
gene_biotype: protein_coding
description:
  Cryptic nitrate reductase 2, gamma subunit; This is a second nitrate reductase enzyme which can substitute for the NRA enzyme and allows E.coli to use nitrate as an electron acceptor during anaerobic growth. The gamma chain is a membrane-embedded heme-iron unit resembling cytochrome b, which transfers electrons from quinones to the beta subunit.


ensembl_gene_id: Z2248
symbol: yddE
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 297 of 297 are 97.97 pct identical to residues 1 to 297 of 297 from Escherichia coli K-12 Strain MG1655: B1464.


ensembl_gene_id: Z2249
symbol: Z2249
gene_biotype: protein_coding
description:
  Hypothetical protein; Residues 1 to 51 of 51 are 98.03 pct identical to residues 231 to 281 of 281 from Escherichia coli K-12 Strain MG1655: B1463.


ensembl_gene_id: Z2250
symbol: Z2250
gene_biotype: protein_coding
description:
  Putative N-hydroxyarylamine O-acetyltransferase; Residues 1 to 222 of 244 are 98.19 pct identical to residues 1 to 222 of 281 from Escherichia coli K-12 Strain MG1655: B1463.


ensembl_gene_id: Z2251
symbol: Z2251
gene_biotype: protein_coding
description:
  Hypothetical protein; Residues 1 to 147 of 147 are 97.95 pct identical to residues 59 to 205 of 205 from Escherichia coli K-12 Strain MG1655: B1462.


ensembl_gene_id: Z2252
symbol: ydcE
gene_biotype: protein_coding
description:
  Hypothetical protein; Residues 14 to 88 of 88 are 100.00 pct identical to residues 1 to 75 of 77 from Escherichia coli K-12 Strain MG1655: B1461; Belongs to the 4-oxalocrotonate tautomerase family. PptA subfamily.


ensembl_gene_id: Z2253
symbol: Z2253
gene_biotype: protein_coding
description:
  H repeat-associated protein of Rhs element; Residues 1 to 193 of 203 are 94.81 pct identical to residues 94 to 278 of 378 from GenPept 118 : gi|1789896|gb|AAC76509.1| (AE000424) putative receptor [Escherichia coli].


ensembl_gene_id: Z2254
symbol: Z2254
gene_biotype: protein_coding
description:
  Partial H repeat-associated protein of Rhs element; Residues 1 to 59 of 59 are 98.30 pct identical to residues 1 to 59 of 253 from GenPept 118 : gi|1786924|gb|AAC73800.1| (AE000174) putative DNA ligase [Escherichia coli].


ensembl_gene_id: Z2256
symbol: Z2256
gene_biotype: protein_coding
description:
  Unknown protein associated with Rhs element; Residues 1 to 69 of 69 are 100.00 pct identical to residues 63 to 131 of 131 from GenPept 118 : gi|2920632|gb|AAC32469.1| (AF044501) dsORF-e4 [Escherichia coli].


ensembl_gene_id: Z2257
symbol: Z2257
gene_biotype: protein_coding
description:
  Unknown protein associated with Rhs element; Residues 1 to 512 of 656 are 93.42 pct identical to residues 17 to 533 of 682 from GenPept 118 : gi|1787728|gb|AAC74538.1| (AE000242) rhsE protein in rhs element [Escherichia coli].


ensembl_gene_id: Z2259
symbol: Z2259
gene_biotype: protein_coding
description:
  Unknown protein associated with Rhs element; Residues 6 to 559 of 572 are 85.01 pct identical to residues 134 to 702 of 1409 from GenPept 118 : gi|2920624|gb|AAC32464.1| (AF044499) core protein [Escherichia coli].


ensembl_gene_id: Z2261
symbol: Z2261
gene_biotype: protein_coding
description:
  Unknown protein associated with Rhs element; Residues 1 to 161 of 167 are 96.27 pct identical to residues 1 to 161 of 1409 from GenPept 118 : gi|2920624|gb|AAC32464.1| (AF044499) core protein [Escherichia coli].


ensembl_gene_id: Z2262
symbol: vgrE
gene_biotype: protein_coding
description:
  Unknown protein associated with Rhs element; Residues 13 to 714 of 714 are 98.43 pct identical to residues 1 to 702 of 702 from GenPept 118 : gi|2920625|gb|AAC32465.1| (AF044499) vgrE protein [Escherichia coli].


ensembl_gene_id: Z2264
symbol: yncH
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 70 of 70 are 92.85 pct identical to residues 1 to 70 of 70 from Escherichia coli K-12 Strain MG1655: B1455.


ensembl_gene_id: Z2265
symbol: yncG
gene_biotype: protein_coding
description:
  Putative transferase; Residues 1 to 205 of 205 are 97.07 pct identical to residues 1 to 205 of 205 from Escherichia coli K-12 Strain MG1655: B1454.


ensembl_gene_id: Z2266
symbol: ansP
gene_biotype: protein_coding
description:
  L-asparagine permease; Residues 1 to 516 of 516 are 100.00 pct identical to residues 1 to 516 of 516 from Escherichia coli K-12 Strain MG1655: B1453.


ensembl_gene_id: Z2267
symbol: yncE
gene_biotype: protein_coding
description:
  Putative receptor; Residues 1 to 353 of 353 are 98.58 pct identical to residues 1 to 353 of 353 from Escherichia coli K-12 Strain MG1655: B1452.


ensembl_gene_id: Z2268
symbol: yncD
gene_biotype: protein_coding
description:
  Putative outer membrane receptor for iron transport; Residues 1 to 700 of 700 are 98.57 pct identical to residues 1 to 700 of 700 from Escherichia coli K-12 Strain MG1655: B1451.


ensembl_gene_id: Z2269
symbol: mcbR
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 240 of 240 are 99.58 pct identical to residues 1 to 240 of 240 from Escherichia coli K-12 Strain MG1655: B1450.


ensembl_gene_id: Z2270
symbol: yncB
gene_biotype: protein_coding
description:
  Putative oxidoreductase; Residues 1 to 376 of 376 are 99.46 pct identical to residues 1 to 376 of 376 from Escherichia coli K-12 Strain MG1655: B1449.


ensembl_gene_id: Z2271
symbol: mnaT
gene_biotype: protein_coding
description:
  Putative resistance protein; Residues 1 to 172 of 172 are 98.83 pct identical to residues 1 to 172 of 172 from Escherichia coli K-12 Strain MG1655: B1448.


ensembl_gene_id: Z2272
symbol: ydcZ
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 149 of 149 are 98.65 pct identical to residues 1 to 149 of 149 from Escherichia coli K-12 Strain MG1655: B1447.


ensembl_gene_id: Z2273
symbol: ydcY
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 77 of 77 are 100.00 pct identical to residues 1 to 77 of 77 from Escherichia coli K-12 Strain MG1655: B1446.


ensembl_gene_id: Z2274
symbol: ydcX
gene_biotype: protein_coding
description:
  Hypothetical protein; Residues 1 to 73 of 73 are 98.63 pct identical to residues 10 to 82 of 82 from Escherichia coli K-12 Strain MG1655: B1445.


ensembl_gene_id: Z2275
symbol: patD
gene_biotype: protein_coding
description:
  Putative aldehyde dehydrogenase; Catalyzes the oxidation 4-aminobutanal (gamma- aminobutyraldehyde) to 4-aminobutanoate (gamma-aminobutyrate or GABA). This is the second step in one of two pathways for putrescine degradation, where putrescine is converted into 4-aminobutanoate via 4- aminobutanal. Also functions as a 5-aminopentanal dehydrogenase in a a L-lysine degradation pathway to succinate that proceeds via cadaverine, glutarate and L-2-hydroxyglutarate.


ensembl_gene_id: Z2276
symbol: ydcV
gene_biotype: protein_coding
description:
  Putative transport system permease protein; Residues 1 to 264 of 264 are 99.62 pct identical to residues 1 to 264 of 264 from Escherichia coli K-12 Strain MG1655: B1443.


ensembl_gene_id: Z2277
symbol: ydcU
gene_biotype: protein_coding
description:
  Putative transport system permease protein; Residues 1 to 313 of 313 are 99.04 pct identical to residues 1 to 313 of 313 from Escherichia coli K-12 Strain MG1655: B1442.


ensembl_gene_id: Z2278
symbol: ydcT
gene_biotype: protein_coding
description:
  Putative ATP-binding component of a transport system; Residues 1 to 337 of 337 are 99.40 pct identical to residues 1 to 337 of 337 from Escherichia coli K-12 Strain MG1655: B1441; Belongs to the ABC transporter superfamily.


ensembl_gene_id: Z2279
symbol: ydcS
gene_biotype: protein_coding
description:
  Putative transport protein; Residues 1 to 381 of 381 are 98.95 pct identical to residues 1 to 381 of 381 from Escherichia coli K-12 Strain MG1655: B1440.


ensembl_gene_id: Z2280
symbol: ydcR
gene_biotype: protein_coding
description:
  Multi modular; Residues 1 to 468 of 468 are 99.35 pct identical to residues 1 to 468 of 468 from Escherichia coli K-12 Strain MG1655: B1439.


ensembl_gene_id: Z2281
symbol: hicB
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Antitoxin component of a type II toxin-antitoxin (TA) system. Functions as an mRNA interferase antitoxin preventing effects of the HicA toxin (By similarity).


ensembl_gene_id: Z2282
symbol: Z2282
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 65 of 65 are 98.46 pct identical to residues 1 to 65 of 65 from Escherichia coli K-12 Strain MG1655: B1437.


ensembl_gene_id: Z2283
symbol: yncJ
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 76 of 76 are 100.00 pct identical to residues 1 to 76 of 76 from Escherichia coli K-12 Strain MG1655: B1436.


ensembl_gene_id: Z2284
symbol: ydcP
gene_biotype: protein_coding
description:
  Putative collagenase; Residues 1 to 667 of 667 are 100.00 pct identical to residues 1 to 667 of 667 from Escherichia coli K-12 Strain MG1655: B1435.


ensembl_gene_id: Z2285
symbol: ydcN
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 178 of 178 are 98.87 pct identical to residues 1 to 178 of 178 from Escherichia coli K-12 Strain MG1655: B1434.


ensembl_gene_id: Z2286
symbol: ydcO
gene_biotype: protein_coding
description:
  Putative membrane transport protein; Residues 1 to 409 of 409 are 99.51 pct identical to residues 69 to 477 of 478 from Escherichia coli K-12 Strain MG1655: B1433.


ensembl_gene_id: Z2287
symbol: ydcL
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 222 of 222 are 100.00 pct identical to residues 1 to 222 of 222 from Escherichia coli K-12 Strain MG1655: B1431.


ensembl_gene_id: Z2288
symbol: tehB
gene_biotype: protein_coding
description:
  Tellurite resistance; Residues 1 to 197 of 197 are 98.47 pct identical to residues 1 to 197 of 197 from Escherichia coli K-12 Strain MG1655: B1430.


ensembl_gene_id: Z2289
symbol: tehA
gene_biotype: protein_coding
description:
  Tellurite resistance; Residues 1 to 330 of 330 are 99.39 pct identical to residues 1 to 330 of 330 from Escherichia coli K-12 Strain MG1655: B1429.


ensembl_gene_id: Z2290
symbol: ydcK
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 326 of 326 are 98.46 pct identical to residues 1 to 326 of 326 from Escherichia coli K-12 Strain MG1655: B1428.


ensembl_gene_id: Z2291
symbol: Z2291
gene_biotype: protein_coding
description:
  Hypothetical protein; Residues 1 to 98 of 98 are 97.95 pct identical to residues 1 to 98 of 179 from Escherichia coli K-12 Strain MG1655: B1427.


ensembl_gene_id: Z2292
symbol: ydcH
gene_biotype: protein_coding
description:
  Hypothetical protein; Residues 1 to 55 of 55 are 96.36 pct identical to residues 1 to 55 of 55 from Escherichia coli K-12 Strain MG1655: B1426.


ensembl_gene_id: Z2293
symbol: Z2293
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 67 of 67 are 100.00 pct identical to residues 1 to 67 of 67 from Escherichia coli K-12 Strain MG1655: B1425.


ensembl_gene_id: Z2294
symbol: ydcG
gene_biotype: protein_coding
description:
  Putative glycoprotein; Probably involved in the control of the structural glucose backbone of osmoregulated periplasmic glucans (OPGs); Belongs to the OpgD/OpgG family.


ensembl_gene_id: Z2296
symbol: Z2296
gene_biotype: protein_coding
description:
  Hypothetical protein; Residues 1 to 174 of 174 are 98.27 pct identical to residues 274 to 447 of 447 from Escherichia coli K-12 Strain MG1655: B1423.


ensembl_gene_id: Z2297
symbol: ydcJ
gene_biotype: protein_coding
description:
  Hypothetical protein; Residues 5 to 198 of 212 are 98.96 pct identical to residues 60 to 253 of 447 from GenPept 118 : gi|1787692|gb|AAC74505.1| (AE000239) orf, hypothetical protein [Escherichia coli].


ensembl_gene_id: Z2298
symbol: Z2298
gene_biotype: protein_coding
description:
  Hypothetical protein; Residues 1 to 59 of 65 are 100.00 pct identical to residues 1 to 59 of 447 from GenPept 118 : gi|1787692|gb|AAC74505.1| (AE000239) orf, hypothetical protein [Escherichia coli].


ensembl_gene_id: Z2299
symbol: ydcI
gene_biotype: protein_coding
description:
  Putative transcriptional regulator LYSR-type; Residues 1 to 354 of 354 are 99.43 pct identical to residues 1 to 354 of 354 from Escherichia coli K-12 Strain MG1655: B1422; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: Z2300
symbol: trg
gene_biotype: protein_coding
description:
  Methyl-accepting chemotaxis protein III, ribose sensor receptor; Residues 1 to 546 of 546 are 98.71 pct identical to residues 1 to 546 of 546 from Escherichia coli K-12 Strain MG1655: B1421.


ensembl_gene_id: Z2301
symbol: mokB
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 55 of 55 are 94.54 pct identical to residues 1 to 55 of 55 from Escherichia coli K-12 Strain MG1655: B1420.


ensembl_gene_id: Z2302
symbol: ydcA
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 57 of 57 are 98.24 pct identical to residues 1 to 57 of 57 from Escherichia coli K-12 Strain MG1655: B1419.


ensembl_gene_id: Z2303
symbol: cybB
gene_biotype: protein_coding
description:
  Cytochrome b(561); Residues 1 to 188 of 188 are 99.46 pct identical to residues 1 to 188 of 188 from Escherichia coli K-12 Strain MG1655: B1418.


ensembl_gene_id: Z2304
symbol: gapC
gene_biotype: protein_coding
description:
  Glyceraldehyde-3-phosphate dehydrogenase; Catalyzes the oxidative phosphorylation of glyceraldehyde 3- phosphate (G3P) to 1,3-bisphosphoglycerate (BPG) using the cofactor NAD. The first reaction step involves the formation of a hemiacetal intermediate between G3P and a cysteine residue, and this hemiacetal intermediate is then oxidized to a thioester, with concomitant reduction of NAD to NADH. The reduced NADH is then exchanged with the second NAD, and the thioester is attacked by a nucleophilic inorganic phosphate to produce BPG.


ensembl_gene_id: Z2306
symbol: aldA
gene_biotype: protein_coding
description:
  Aldehyde dehydrogenase, NAD-linked; Residues 1 to 479 of 479 are 99.79 pct identical to residues 1 to 479 of 479 from Escherichia coli K-12 Strain MG1655: B1415; Belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: Z2308
symbol: ydcF
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 266 of 266 are 99.24 pct identical to residues 1 to 266 of 266 from Escherichia coli K-12 Strain MG1655: B1414.


ensembl_gene_id: Z2313
symbol: hrpA
gene_biotype: protein_coding
description:
  Helicase, ATP-dependent; Residues 1 to 1281 of 1281 are 99.60 pct identical to residues 1 to 1281 of 1281 from Escherichia coli K-12 Strain MG1655: B1413.


ensembl_gene_id: Z2315
symbol: acpD
gene_biotype: protein_coding
description:
  Acyl carrier protein phosphodiesterase; Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family.


ensembl_gene_id: Z2316
symbol: ynbD
gene_biotype: protein_coding
description:
  Putative enzymes; Residues 1 to 430 of 430 are 95.81 pct identical to residues 1 to 430 of 430 from Escherichia coli K-12 Strain MG1655: B1411.


ensembl_gene_id: Z2317
symbol: ynbC
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 585 of 585 are 97.43 pct identical to residues 1 to 585 of 585 from Escherichia coli K-12 Strain MG1655: B1410.


ensembl_gene_id: Z2318
symbol: ynbB
gene_biotype: protein_coding
description:
  Putative phosphatidate cytidiltransferase; Residues 1 to 298 of 298 are 94.63 pct identical to residues 1 to 298 of 298 from Escherichia coli K-12 Strain MG1655: B1409; Belongs to the CDS family.


ensembl_gene_id: Z2319
symbol: ynbA
gene_biotype: protein_coding
description:
  Probable enzyme; Residues 1 to 202 of 203 are 98.01 pct identical to residues 1 to 202 of 203 from Escherichia coli K-12 Strain MG1655: B1408.


ensembl_gene_id: Z2320
symbol: ydbD
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 770 of 770 are 96.75 pct identical to residues 1 to 770 of 770 from Escherichia coli K-12 Strain MG1655: B1407.


ensembl_gene_id: Z2321
symbol: ydbC
gene_biotype: protein_coding
description:
  Putative dehydrogenase; Residues 1 to 286 of 286 are 98.95 pct identical to residues 1 to 286 of 286 from Escherichia coli K-12 Strain MG1655: B1406.


ensembl_gene_id: Z2322
symbol: Z2322
gene_biotype: protein_coding
description:
  Putative outer membrane protein; Residues 1 to 819 of 819 are 76.15 pct identical to residues 293 to 1107 of 1107 from GenPept 118 : gi|1787672|gb|AAC74487.1| (AE000237) split orf [Escherichia coli].


ensembl_gene_id: Z2323
symbol: Z2323
gene_biotype: protein_coding
description:
  Hypothetical protein; Residues 41 to 611 of 906 are 36.74 pct identical to residues 113 to 835 of 852 from GenPept 118 : gi|1787668|gb|AAC74483.1| (AE000237) split orf [Escherichia coli].


ensembl_gene_id: Z2326
symbol: ydbL
gene_biotype: protein_coding
description:
  Hypothetical protein; Residues 1 to 109 of 109 are 72.47 pct identical to residues 1 to 109 of 110 from GenPept 118 : gi|1787648|gb|AAC74465.1| (AE000235) orf, hypothetical protein [Escherichia coli].


ensembl_gene_id: Z2327
symbol: ynbE
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 61 of 61 are 90.16 pct identical to residues 1 to 61 of 61 from GenPept 118 : gi|1787647|gb|AAC74464.1| (AE000235) orf, hypothetical protein [Escherichia coli].


ensembl_gene_id: Z2328
symbol: ydbH
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 879 of 879 are 97.95 pct identical to residues 1 to 879 of 879 from Escherichia coli K-12 Strain MG1655: B1381.


ensembl_gene_id: Z2329
symbol: ldhA
gene_biotype: protein_coding
description:
  Fermentative D-lactate dehydrogenase, NAD-dependent; Residues 1 to 329 of 329 are 99.69 pct identical to residues 1 to 329 of 329 from Escherichia coli K-12 Strain MG1655: B1380; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: Z2330
symbol: hslJ
gene_biotype: protein_coding
description:
  Heat shock protein hslJ; Residues 1 to 140 of 140 are 99.28 pct identical to residues 1 to 140 of 140 from Escherichia coli K-12 Strain MG1655: B1379.


ensembl_gene_id: Z2332
symbol: ydbK
gene_biotype: protein_coding
description:
  Putative oxidoreductase, Fe-S subunit; Residues 1 to 1174 of 1174 are 99.57 pct identical to residues 1 to 1174 of 1174 from Escherichia coli K-12 Strain MG1655: B1378.


ensembl_gene_id: Z2333
symbol: Z2333
gene_biotype: protein_coding
description:
  Partial putative outer membrane protein; Residues 1 to 118 of 123 are 97.45 pct identical to residues 1 to 118 of 377 from Escherichia coli K-12 Strain MG1655: B1377.


ensembl_gene_id: Z2334
symbol: Z2334
gene_biotype: protein_coding
description:
  Partial putative outer membrane protein; Residues 2 to 255 of 255 are 98.03 pct identical to residues 124 to 377 of 377 from Escherichia coli K-12 Strain MG1655: B1377.


ensembl_gene_id: Z2335
symbol: ynaF
gene_biotype: protein_coding
description:
  Hypothetical protein; Residues 1 to 168 of 168 are 99.40 pct identical to residues 1 to 168 of 168 from Escherichia coli K-12 Strain MG1655: B1376.


ensembl_gene_id: Z2337
symbol: nleG5-1
gene_biotype: protein_coding
description:
  Unknown protein encoded by prophage CP-933R; Residues 80 to 210 of 213 are 41.98 pct identical to residues 8 to 136 of 140 from GenPept 118 : gi|4126792|dbj|BAA36750.1| (AB016764) ORF4 [Escherichia coli].


ensembl_gene_id: Z2338
symbol: nleG6-1
gene_biotype: protein_coding
description:
  Unknown protein encoded by prophage CP-933R; Residues 72 to 206 of 209 are 91.11 pct identical to residues 1 to 135 of 140 from GenPept 118 : gi|4126792|dbj|BAA36750.1| (AB016764) ORF4 [Escherichia coli].


ensembl_gene_id: Z2339
symbol: nleG2-2
gene_biotype: protein_coding
description:
  Unknown protein encoded by prophage CP-933R; Residues 72 to 187 of 191 are 35.04 pct identical to residues 20 to 136 of 140 from GenPept 118 : gi|4126792|dbj|BAA36750.1| (AB016764) ORF4 [Escherichia coli].


ensembl_gene_id: Z2340
symbol: Z2340
gene_biotype: protein_coding
description:
  Putative tail fiber protein encoded by prophage CP-933R; Residues 123 to 439 of 439 are 64.26 pct identical to residues 330 to 645 of 645 from GenPept 118 : gi|4585436|gb|AAD25464.1|AF125520_59 (AF125520) putative tail fiber protein [Bacteriophage 933W].


ensembl_gene_id: Z2342
symbol: Z2342
gene_biotype: protein_coding
description:
  Partial putative outer membrane protein Lom precursor encoded by prophage CP-933R; Residues 1 to 108 of 108 are 66.66 pct identical to residues 92 to 199 of 199 from GenPept 118 : gi|7532789|gb|AAF63231.1|AF151091_2 (AF151091) Lom [prophage P-EibA].


ensembl_gene_id: Z2343
symbol: Z2343
gene_biotype: protein_coding
description:
  Partial putative outer membrane protein Lom precursor encoded by prophage CP-933R; Residues 1 to 92 of 93 are 69.56 pct identical to residues 1 to 92 of 199 from GenPept 118 : gi|7532789|gb|AAF63231.1|AF151091_2 (AF151091) Lom [prophage P-EibA].


ensembl_gene_id: Z2344
symbol: Z2344
gene_biotype: protein_coding
description:
  Putative tail fiber protein encoded by prophage CP-933R; Residues 1 to 976 of 977 are 63.22 pct identical to residues 181 to 1131 of 1132 from GenPept 118 : gi|215125|gb|AAA96553.1| (J02459) J (tail:host specificity;1132) [bacteriophage lambda].


ensembl_gene_id: Z2346
symbol: Z2346
gene_biotype: protein_coding
description:
  Partial putative phage tail protein encoded by prophage CP-933R; Residues 1 to 177 of 177 are 74.57 pct identical to residues 1 to 177 of 1132 from GenPept 118 : gi|215125|gb|AAA96553.1| (J02459) J (tail:host specificity;1132) [bacteriophage lambda].


ensembl_gene_id: Z2347
symbol: sodC_1
gene_biotype: protein_coding
description:
  Putative copper-zinc superoxide dismutase encoded within prophage CP-933R; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.


ensembl_gene_id: Z2348
symbol: Z2348
gene_biotype: protein_coding
description:
  Partial putative phage tail protein encoded by prophage CP-933R; Residues 1 to 42 of 44 are 73.80 pct identical to residues 182 to 223 of 223 from GenPept 118 : gi|215124|gb|AAA96552.1| (J02459) I (tail component;223) [bacteriophage lambda].


ensembl_gene_id: Z2350
symbol: Z2350
gene_biotype: protein_coding
description:
  Partial putative phage tail protein encoded by prophage CP-933R; Residues 24 to 93 of 93 are 52.85 pct identical to residues 108 to 175 of 223 from GenPept 118 : gi|215124|gb|AAA96552.1| (J02459) I (tail component;223) [bacteriophage lambda]; stop codon not determined.


ensembl_gene_id: Z2351
symbol: Z2351
gene_biotype: protein_coding
description:
  Putative tail component of prophage CP-933R; Residues 26 to 221 of 224 are 84.69 pct identical to residues 1 to 196 of 199 from GenPept 118 : gi|215123|gb|AAA96551.1| (J02459) K (tail component;199) [bacteriophage lambda].


ensembl_gene_id: Z2352
symbol: Z2352
gene_biotype: protein_coding
description:
  Putative tail component of prophage CP-933R; Residues 1 to 232 of 232 are 76.29 pct identical to residues 1 to 232 of 232 from GenPept 118 : gi|215122|gb|AAA96550.1| (J02459) L (tail component;232) [bacteriophage lambda].


ensembl_gene_id: Z2353
symbol: Z2353
gene_biotype: protein_coding
description:
  Putative tail component of prophage CP-933R; Residues 1 to 109 of 109 are 82.56 pct identical to residues 1 to 109 of 109 from GenPept 118 : gi|215121|gb|AAA96549.1| (J02459) M (tail component;109) [bacteriophage lambda].


ensembl_gene_id: Z2354
symbol: Z2354
gene_biotype: protein_coding
description:
  Partial putative tail component of prophage CP-933R; Residues 2 to 254 of 254 are 80.63 pct identical to residues 601 to 853 of 853 from GenPept 118 : gi|215120|gb|AAA96548.1| (J02459) H (tail component;853) [bacteriophage lambda].


ensembl_gene_id: Z2355
symbol: Z2355
gene_biotype: protein_coding
description:
  Partial putative tail component of prophage CP-933R; Residues 1 to 587 of 620 are 76.31 pct identical to residues 1 to 581 of 853 from GenPept 118 : gi|215120|gb|AAA96548.1| (J02459) H (tail component;853) [bacteriophage lambda].


ensembl_gene_id: Z2356
symbol: Z2356
gene_biotype: protein_coding
description:
  Putative tail component of prophage CP-933R; Residues 1 to 132 of 137 are 71.96 pct identical to residues 16 to 143 of 144 from GenPept 118 : gi|215119|gb|AAA96547.1| (J02459) T (tail component;144) [bacteriophage lambda].


ensembl_gene_id: Z2357
symbol: Z2357
gene_biotype: protein_coding
description:
  Putative tail component of prophage CP-933R; Residues 25 to 167 of 167 are 68.05 pct identical to residues 1 to 140 of 140 from GenPept 118 : gi|215118|gb|AAA96546.1| (J02459) G (tail component;140) [bacteriophage lambda].


ensembl_gene_id: Z2358
symbol: Z2358
gene_biotype: protein_coding
description:
  Putative tail component of prophage CP-933R; Residues 1 to 214 of 220 are 78.97 pct identical to residues 31 to 244 of 246 from GenPept 118 : gi|215117|gb|AAA96545.1| (J02459) V (tail component;256) [bacteriophage lambda].


ensembl_gene_id: Z2359
symbol: Z2359
gene_biotype: protein_coding
description:
  Partial putative capsid structural protein of prophage CP-933R; Residues 1 to 88 of 88 are 95.45 pct identical to residues 1 to 88 of 342 from GenPept 118 : gi|215462|gb|AAA32346.1| (M81255) major capsid protein [Bacteriophage 21].


ensembl_gene_id: Z2360
symbol: Z2360
gene_biotype: protein_coding
description:
  Putative capsid protein of prophage CP-933R; Residues 1 to 115 of 115 are 95.65 pct identical to residues 1 to 115 of 115 from GenPept 118 : gi|215461|gb|AAA32345.1| (M81255) capsid protein small subunit [Bacteriophage 21].


ensembl_gene_id: Z2361
symbol: Z2361
gene_biotype: protein_coding
description:
  Putative capsid assembly protein of prophage CP-933R; Residues 1 to 501 of 501 are 98.00 pct identical to residues 1 to 501 of 501 from GenPept 118 : gi|215459|gb|AAA32343.1| (M81255) head-tail preconnector gp5 [Bacteriophage 21].


ensembl_gene_id: Z2362
symbol: Z2362
gene_biotype: protein_coding
description:
  Putative capsid protein of prophage CP-933R; Residues 1 to 530 of 530 are 98.49 pct identical to residues 1 to 530 of 530 from GenPept 118 : gi|215458|gb|AAA32342.1| (M81255) head-tail preconnector gp5 [Bacteriophage 21].


ensembl_gene_id: Z2363
symbol: Z2363
gene_biotype: protein_coding
description:
  Putative DNA packaging protein of prophage CP-933R; Residues 1 to 46 of 46 are 95.65 pct identical to residues 23 to 68 of 68 from GenPept 118 : gi|215457|gb|AAA32341.1| (M81255) head completion protein gp3 [Bacteriophage 21].


ensembl_gene_id: Z2364
symbol: Z2364
gene_biotype: protein_coding
description:
  Putative DNA packaging protein of prophage CP-933R; Residues 18 to 654 of 654 are 91.99 pct identical to residues 6 to 642 of 642 from GenPept 118 : gi|215456|gb|AAA32340.1| (M81255) terminase large subunit [Bacteriophage 21].


ensembl_gene_id: Z2365
symbol: Z2365
gene_biotype: protein_coding
description:
  Putative DNA packaging protein of prophage CP-933R; Residues 59 to 164 of 169 are 42.72 pct identical to residues 60 to 163 of 168 from GenPept 118 : gi|3192684|gb|AAC19037.1| (AF064539) gp1 [Bacteriophage N15].


ensembl_gene_id: Z2366
symbol: Z2366
gene_biotype: protein_coding
description:
  Unknown protein encoded within prophage CP-933R; Residues 1 to 55 of 74 are 92.72 pct identical to residues 1 to 55 of 64 from GenPept 118 : gi|1778472|gb|AAB40755.1| (U82598) hypothetical protein [Escherichia coli].


ensembl_gene_id: Z2369
symbol: Z2369
gene_biotype: protein_coding
description:
  Putative endopeptidase Rz of prophage CP-933R; Residues 1 to 154 of 155 are 83.76 pct identical to residues 1 to 154 of 155 from GenPept 118 : gi|5881639|dbj|BAA84330.1| (AP000363) Rz [Bacteriophage VT2-Sa].


ensembl_gene_id: Z2371
symbol: Z2371
gene_biotype: protein_coding
description:
  Putative lysozyme R of prophage CP-933R; Residues 1 to 177 of 177 are 97.74 pct identical to residues 1 to 177 of 177 from GenPept 118 : gi|4335686|gb|AAD17382.1| (AF034975) R protein [Bacteriophage H-19B].


ensembl_gene_id: Z2372
symbol: Z2372
gene_biotype: protein_coding
description:
  Unknown protein encoded within prophage CP-933R; Residues 1 to 74 of 123 are 44.59 pct identical to residues 1 to 74 of 103 from GenPept 118 : gi|1787837|gb|AAC74628.1| (AE000252) orf, hypothetical protein [Escherichia coli].


ensembl_gene_id: Z2374
symbol: Z2374
gene_biotype: protein_coding
description:
  Putative holin protein of prophage CP-933R; Residues 1 to 68 of 68 are 98.52 pct identical to residues 1 to 68 of 68 from GenPept 118 : gi|2668771|gb|AAD04658.1| (AF034975) putative holin protein [Bacteriophage H-19B].


ensembl_gene_id: Z2375
symbol: Z2375
gene_biotype: protein_coding
description:
  Orf; Residues 1 to 108 of 108 are 100.00 pct identical to residues 1 to 108 of 108 from GenPept 118 : gi|3822180|gb|AAC70134.1| (AF074613) hypothetical protein [Escherichia coli O157:H7].


ensembl_gene_id: Z2376
symbol: Z2376
gene_biotype: protein_coding
description:
  Putative IS629 transposase within prophage CP-933R; Residues 1 to 215 of 215 are 99.53 pct identical to residues 82 to 296 of 296 from GenPept 118 : gi|3822179|gb|AAC70133.1| (AF074613) transposase [Escherichia coli O157:H7].


ensembl_gene_id: Z2377
symbol: Z2377
gene_biotype: protein_coding
description:
  Unknown protein encoded within prophage CP-933R; Residues 1 to 613 of 616 are 53.71 pct identical to residues 1 to 640 of 645 from GenPept 118 : gi|4585419|gb|AAD25447.1|AF125520_42 (AF125520) hypothetical protein [Bacteriophage 933W].


ensembl_gene_id: Z2379
symbol: Z2379
gene_biotype: protein_coding
description:
  Unknown protein encoded within prophage CP-933R; Residues 30 to 158 of 164 are 26.92 pct identical to residues 15 to 143 of 150 from GenPept 118 : gi|6460016|gb|AAF11761.1|AE002054_6 (AE002054) tellurium resistance protein TerB (terB) putative [Deinococcus radiodurans].


ensembl_gene_id: Z2389
symbol: dcm-2
gene_biotype: protein_coding
description:
  Putative DNA modification methyltransferase encoded within prophage CP-933R; Residues 4 to 368 of 383 are 40.90 pct identical to residues 7 to 367 of 424 from GenPept 118 : gi|458402|gb|AAA50432.1| (U06424) M-XorII [Xanthomonas oryzae].


ensembl_gene_id: Z2390
symbol: Z2390
gene_biotype: protein_coding
description:
  Unknown protein encoded within prophage CP-933R; Residues 32 to 85 of 85 are 70.68 pct identical to residues 148 to 205 of 205 from GenPept 118 : gi|4490348|emb|CAB38711.1| (AJ236875) hypothetical protein [bacteriophage H19J].


ensembl_gene_id: Z2391
symbol: Z2391
gene_biotype: protein_coding
description:
  Unknown protein encoded within prophage CP-933R; Residues 1 to 42 of 53 are 88.09 pct identical to residues 1 to 42 of 317 from GenPept 118 : gi|8439584|gb|AAF75006.1| (AF217253) eaa [Bacteriophage P22].


ensembl_gene_id: Z2395
symbol: Z2395
gene_biotype: protein_coding
description:
  Unknown protein encoded within prophage CP-933R; Residues 1 to 168 of 270 are 92.26 pct identical to residues 1 to 168 of 203 from Escherichia coli K-12 Strain MG1655: B1361.


ensembl_gene_id: Z2396
symbol: Z2396
gene_biotype: protein_coding
description:
  Putative DNA replication factor encoded by prophage CP-933R; Residues 1 to 248 of 248 are 96.37 pct identical to residues 1 to 248 of 248 from Escherichia coli K-12 Strain MG1655: B1360.


ensembl_gene_id: Z2397
symbol: Z2397
gene_biotype: protein_coding
description:
  Unknown protein encoded within prophage CP-933R; Residues 139 to 262 of 262 are 79.03 pct identical to residues 162 to 285 of 285 from GenPept 118 : gi|1787622|gb|AAC74441.1| (AE000233) orf, hypothetical protein [Escherichia coli].


ensembl_gene_id: Z2398
symbol: Z2398
gene_biotype: protein_coding
description:
  Unknown protein encoded within prophage CP-933R; Residues 1 to 140 of 140 are 94.28 pct identical to residues 1 to 140 of 140 from Escherichia coli K-12 Strain MG1655: B1358.


ensembl_gene_id: Z2399
symbol: Z2399
gene_biotype: protein_coding
description:
  Putative regulatory protein Cro of prophage CP-933R; Residues 25 to 97 of 108 are 61.64 pct identical to residues 1 to 73 of 76 from GenPept 118 : gi|407286|gb|AAB60269.1| (U02466) cro [Bacteriophage HK022].


ensembl_gene_id: Z2400
symbol: Z2400
gene_biotype: protein_coding
description:
  Partial putative represssor protein encoded within prophage CP-933R; Residues 4 to 88 of 98 are 52.94 pct identical to residues 3 to 87 of 235 from GenPept 118 : gi|435310|emb|CAA34222.1| (X16093) cI gene product (AA 1-208) [Bacteriophage HK022].


ensembl_gene_id: Z2402
symbol: Z2402
gene_biotype: protein_coding
description:
  Unknown protein encoded within prophage CP-933R; Residues 1 to 59 of 59 are 98.30 pct identical to residues 1 to 59 of 59 from Escherichia coli K-12 Strain MG1655: B1355.


ensembl_gene_id: Z2403
symbol: Z2403
gene_biotype: protein_coding
description:
  Unknown protein encoded within prophage CP-933R; Residues 1 to 58 of 58 are 100.00 pct identical to residues 1 to 58 of 58 from Escherichia coli K-12 Strain MG1655: B1354.


ensembl_gene_id: Z2404
symbol: sieB
gene_biotype: protein_coding
description:
  Prophage CP-933R superinfection exclusion protein; Residues 1 to 203 of 203 are 100.00 pct identical to residues 1 to 203 of 203 from Escherichia coli K-12 Strain MG1655: B1353.


ensembl_gene_id: Z2406
symbol: ydaD
gene_biotype: protein_coding
description:
  Unknown protein encoded within prophage CP-933R; Residues 1 to 77 of 77 are 98.70 pct identical to residues 1 to 77 of 77 from Escherichia coli K-12 Strain MG1655: B1352.


ensembl_gene_id: Z2408
symbol: racC
gene_biotype: protein_coding
description:
  Putative membrane protein encoded within prophage CP-933R; Residues 1 to 91 of 91 are 98.90 pct identical to residues 1 to 91 of 91 from Escherichia coli K-12 Strain MG1655: B1351.


ensembl_gene_id: Z2409
symbol: recE
gene_biotype: protein_coding
description:
  Putative exodeoxyribonuclease VIII of prophage CP-933R; Residues 1 to 866 of 866 are 99.19 pct identical to residues 1 to 866 of 866 from Escherichia coli K-12 Strain MG1655: B1350.


ensembl_gene_id: Z2410
symbol: recT
gene_biotype: protein_coding
description:
  Recombinase, DNA renaturation protein encoded by prophage CP-933R; Residues 1 to 269 of 269 are 98.51 pct identical to residues 1 to 269 of 269 from Escherichia coli K-12 Strain MG1655: B1349.


ensembl_gene_id: Z2412
symbol: lar
gene_biotype: protein_coding
description:
  Restriction alleviation and modification enhancement protein encoded by prophage CP-933R; Residues 1 to 49 of 49 are 100.00 pct identical to residues 1 to 49 of 64 from Escherichia coli K-12 Strain MG1655: B1348.


ensembl_gene_id: Z2413
symbol: ydaC
gene_biotype: protein_coding
description:
  Unknown protein encoded within prophage CP-933R; Residues 25 to 86 of 86 are 100.00 pct identical to residues 1 to 62 of 69 from Escherichia coli K-12 Strain MG1655: B1347.


ensembl_gene_id: Z2414
symbol: ydaQ
gene_biotype: protein_coding
description:
  Unknown protein encoded within prophage CP-933R; Residues 1 to 79 of 79 are 100.00 pct identical to residues 1 to 79 of 79 from Escherichia coli K-12 Strain MG1655: B1346.


ensembl_gene_id: Z2415
symbol: intR
gene_biotype: protein_coding
description:
  Putative integrase for prophage CP-933R; Residues 1 to 411 of 411 are 98.78 pct identical to residues 1 to 411 of 411 from Escherichia coli K-12 Strain MG1655: B1345; Belongs to the 'phage' integrase family.


ensembl_gene_id: Z2416
symbol: ydaO
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine/cysteine desulfurase (IscS) system.


ensembl_gene_id: Z2417
symbol: dbpA
gene_biotype: protein_coding
description:
  ATP-dependent RNA helicase; DEAD-box RNA helicase involved in the assembly of the 50S ribosomal subunit. Has an RNA-dependent ATPase activity, which is specific for 23S rRNA, and a 3' to 5' RNA helicase activity that uses the energy of ATP hydrolysis to destabilize and unwind short rRNA duplexes.


ensembl_gene_id: Z2419
symbol: zntB
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Mediates efflux of zinc ions; Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.


ensembl_gene_id: Z2421
symbol: dgcM
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Part of a signaling cascade that regulates curli biosynthesis. The cascade is composed of two cyclic-di-GMP (c-di-GMP) control modules, in which c-di-GMP controlled by the DgcE/PdeH pair (module I) regulates the activity of the DgcM/PdeR pair (module II), which in turn regulates activity of the transcription factor MlrA and expression of the master biofilm regulator csgD.


ensembl_gene_id: Z2422
symbol: ydaL
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 187 of 187 are 98.93 pct identical to residues 1 to 187 of 187 from Escherichia coli K-12 Strain MG1655: B1340.


ensembl_gene_id: Z2423
symbol: ydaK
gene_biotype: protein_coding
description:
  Putative transcriptional regulator LYSR-type; Residues 1 to 302 of 302 are 99.66 pct identical to residues 1 to 302 of 302 from Escherichia coli K-12 Strain MG1655: B1339; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: Z2425
symbol: ydaJ
gene_biotype: protein_coding
description:
  Putative aminohydrolase; Residues 1 to 436 of 436 are 98.62 pct identical to residues 6 to 441 of 441 from Escherichia coli K-12 Strain MG1655: B1338.


ensembl_gene_id: Z2427
symbol: abgB
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 481 of 481 are 99.37 pct identical to residues 1 to 481 of 481 from Escherichia coli K-12 Strain MG1655: B1337.


ensembl_gene_id: Z2428
symbol: Z2428
gene_biotype: protein_coding
description:
  Partial putative pump protein; Residues 1 to 261 of 265 are 98.85 pct identical to residues 3 to 263 of 510 from Escherichia coli K-12 Strain MG1655: B1336.


ensembl_gene_id: Z2429
symbol: Z2429
gene_biotype: protein_coding
description:
  Unknown protein in IS629; Residues 1 to 108 of 108 are 100.00 pct identical to residues 1 to 108 of 108 from GenPept 118 : gi|3822180|gb|AAC70134.1| (AF074613) hypothetical protein [Escherichia coli O157:H7].


ensembl_gene_id: Z2431
symbol: Z2431
gene_biotype: protein_coding
description:
  Partial putative pump protein; Residues 1 to 230 of 230 are 99.56 pct identical to residues 281 to 510 of 510 from Escherichia coli K-12 Strain MG1655: B1336.


ensembl_gene_id: Z2432
symbol: ogt
gene_biotype: protein_coding
description:
  O-6-alkylguanine-DNA/cysteine-protein methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated.


ensembl_gene_id: Z2433
symbol: fnr
gene_biotype: protein_coding
description:
  Transcriptional regulation of aerobic, anaerobic respiration, osmotic balance; Global transcription factor that controls the expression of over 100 target genes in response to anoxia. It facilitates the adaptation to anaerobic growth conditions by regulating the expression of gene products that are involved in anaerobic energy metabolism. When the terminal electron acceptor, O(2), is no longer available, it represses the synthesis of enzymes involved in aerobic respiration and increases the synthesis of enzymes required for anaerobic respiration (By similarity).


ensembl_gene_id: Z2435
symbol: ydaA
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Required for resistance to DNA-damaging agents. Belongs to the universal stress protein A family.


ensembl_gene_id: Z2436
symbol: ynaJ
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 85 of 85 are 100.00 pct identical to residues 1 to 85 of 85 from Escherichia coli K-12 Strain MG1655: B1332.


ensembl_gene_id: Z2437
symbol: ynaI
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 343 of 343 are 100.00 pct identical to residues 1 to 343 of 343 from Escherichia coli K-12 Strain MG1655: B1330; Belongs to the MscS (TC 1.A.23) family.


ensembl_gene_id: Z2438
symbol: mppA
gene_biotype: protein_coding
description:
  Putative transport periplasmic protein; Residues 1 to 544 of 544 are 99.81 pct identical to residues 1 to 544 of 544 from Escherichia coli K-12 Strain MG1655: B1329.


ensembl_gene_id: Z2439
symbol: ycjZ
gene_biotype: protein_coding
description:
  Putative transcriptional regulator LYSR-type; Residues 1 to 299 of 299 are 99.33 pct identical to residues 1 to 299 of 299 from Escherichia coli K-12 Strain MG1655: B1328; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: Z2442
symbol: Z2442
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 310 of 310 are 98.38 pct identical to residues 1 to 310 of 310 from Escherichia coli K-12 Strain MG1655: B1327.


ensembl_gene_id: Z2444
symbol: Z2444
gene_biotype: protein_coding
description:
  Hypothetical protein; Residues 15 to 117 of 122 are 62.13 pct identical to residues 22 to 123 of 310 from GenPept 118 : gi|1787587|gb|AAC74409.1| (AE000230) orf, hypothetical protein [Escherichia coli].


ensembl_gene_id: Z2445
symbol: Z2445
gene_biotype: protein_coding
description:
  Hypothetical protein; Residues 8 to 207 of 207 are 32.84 pct identical to residues 117 to 310 of 310 from GenPept 118 : gi|1787587|gb|AAC74409.1| (AE000230) orf, hypothetical protein [Escherichia coli].


ensembl_gene_id: Z2446
symbol: ymjC
gene_biotype: protein_coding
description:
  Hypothetical protein; Residues 5 to 193 of 216 are 25.25 pct identical to residues 1 to 195 of 216 from GenPept 118 : gi|1407795|gb|AAC64864.1| (U60647) unknown [Yersinia pestis].


ensembl_gene_id: Z2448
symbol: ycjI
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in muropeptide degradation. Catalyzes the hydrolysis of the gamma-D-glutamyl-diaminopimelic acid (gamma-D-Glu-Dap) amide bond in the murein tripeptide L-alanyl-gamma-D-glutamyl-meso- diaminopimelic acid, leading to the formation of L-Ala-gamma-D-Glu and Dap; Belongs to the peptidase M14 family.


ensembl_gene_id: Z2450
symbol: ycjG
gene_biotype: protein_coding
description:
  Putative muconate cycloisomerase I; Residues 1 to 321 of 321 are 99.06 pct identical to residues 15 to 335 of 335 from Escherichia coli K-12 Strain MG1655: B1325.


ensembl_gene_id: Z2452
symbol: tpx
gene_biotype: protein_coding
description:
  Thiol peroxidase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Tpx subfamily.


ensembl_gene_id: Z2454
symbol: tyrR
gene_biotype: protein_coding
description:
  Transcriptional regulation of aroF, aroG, tyrA and aromatic amino acid transport; Residues 1 to 513 of 513 are 99.80 pct identical to residues 1 to 513 of 513 from Escherichia coli K-12 Strain MG1655: B1323.


ensembl_gene_id: Z2456
symbol: ycjF
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 353 of 353 are 99.43 pct identical to residues 1 to 353 of 353 from Escherichia coli K-12 Strain MG1655: B1322.


ensembl_gene_id: Z2458
symbol: ycjX
gene_biotype: protein_coding
description:
  Putative EC 2.1 enzymes; Residues 1 to 465 of 465 are 99.13 pct identical to residues 1 to 465 of 465 from Escherichia coli K-12 Strain MG1655: B1321.


ensembl_gene_id: Z2461
symbol: ycjW
gene_biotype: protein_coding
description:
  Putative LACI-type transcriptional regulator; Residues 1 to 332 of 332 are 98.19 pct identical to residues 1 to 332 of 332 from Escherichia coli K-12 Strain MG1655: B1320.


ensembl_gene_id: Z2462
symbol: ompG
gene_biotype: protein_coding
description:
  Outer membrane protein; Residues 1 to 301 of 301 are 98.67 pct identical to residues 1 to 301 of 301 from Escherichia coli K-12 Strain MG1655: B1319.


ensembl_gene_id: Z2463
symbol: ycjV
gene_biotype: protein_coding
description:
  Putative ATP-binding component of a transport system; Residues 1 to 320 of 360 are 99.06 pct identical to residues 1 to 320 of 322 from Escherichia coli K-12 Strain MG1655: B1318; Belongs to the ABC transporter superfamily.


ensembl_gene_id: Z2465
symbol: ycjU
gene_biotype: protein_coding
description:
  Putative beta-phosphoglucomutase; Residues 1 to 219 of 219 are 97.26 pct identical to residues 1 to 219 of 219 from Escherichia coli K-12 Strain MG1655: B1317.


ensembl_gene_id: Z2467
symbol: ycjT
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 755 of 755 are 98.14 pct identical to residues 1 to 755 of 755 from Escherichia coli K-12 Strain MG1655: B1316.


ensembl_gene_id: Z2468
symbol: ycjS
gene_biotype: protein_coding
description:
  Putative dehydrogenase; Residues 1 to 351 of 351 are 98.86 pct identical to residues 1 to 351 of 351 from Escherichia coli K-12 Strain MG1655: B1315.


ensembl_gene_id: Z2469
symbol: ycjR
gene_biotype: protein_coding
description:
  Putative transient receptor potential locus; Residues 1 to 262 of 262 are 98.47 pct identical to residues 4 to 265 of 265 from Escherichia coli K-12 Strain MG1655: B1314.


ensembl_gene_id: Z2470
symbol: ycjQ
gene_biotype: protein_coding
description:
  Putative oxidoreductase; Residues 1 to 350 of 350 are 99.14 pct identical to residues 1 to 350 of 350 from Escherichia coli K-12 Strain MG1655: B1313.


ensembl_gene_id: Z2471
symbol: ycjP
gene_biotype: protein_coding
description:
  Putative transport system permease protein; Residues 1 to 280 of 280 are 98.57 pct identical to residues 1 to 280 of 280 from Escherichia coli K-12 Strain MG1655: B1312.


ensembl_gene_id: Z2472
symbol: ycjO
gene_biotype: protein_coding
description:
  Putative binding-protein dependent transport protein; Residues 1 to 293 of 293 are 99.65 pct identical to residues 1 to 293 of 293 from Escherichia coli K-12 Strain MG1655: B1311.


ensembl_gene_id: Z2473
symbol: Z2473
gene_biotype: protein_coding
description:
  Partial putative periplasmic transport protein; Residues 1 to 204 of 204 are 97.05 pct identical to residues 227 to 430 of 430 from Escherichia coli K-12 Strain MG1655: B1310.


ensembl_gene_id: Z2474
symbol: Z2474
gene_biotype: protein_coding
description:
  Partial putative periplasmic transport protein; Residues 1 to 209 of 209 are 99.04 pct identical to residues 1 to 209 of 430 from Escherichia coli K-12 Strain MG1655: B1310.


ensembl_gene_id: Z2475
symbol: ycjM
gene_biotype: protein_coding
description:
  Putative polysaccharide hydrolase; Residues 1 to 434 of 434 are 95.39 pct identical to residues 135 to 568 of 568 from Escherichia coli K-12 Strain MG1655: B1309.


ensembl_gene_id: Z2476
symbol: Z2476
gene_biotype: protein_coding
description:
  Hypothetical protein; Residues 1 to 111 of 124 are 100.00 pct identical to residues 10 to 120 of 568 from Escherichia coli K-12 Strain MG1655: B1309.


ensembl_gene_id: Z2477
symbol: pspE
gene_biotype: protein_coding
description:
  Phage shock protein; Residues 1 to 104 of 104 are 99.03 pct identical to residues 1 to 104 of 104 from Escherichia coli K-12 Strain MG1655: B1308.


ensembl_gene_id: Z2478
symbol: pspD
gene_biotype: protein_coding
description:
  Phage shock protein; The phage shock protein (psp) operon (pspABCDE) may play a significant role in the competition for survival under nutrient- or energy-limited conditions.


ensembl_gene_id: Z2479
symbol: pspC
gene_biotype: protein_coding
description:
  Phage shock protein: activates phage shock-protein expression; The phage shock protein (psp) operon (pspABCDE) may play a significant role in the competition for survival under nutrient- or energy-limited conditions. PspC is involved in transcription regulation (By similarity); Belongs to the phageshock PspC family.


ensembl_gene_id: Z2480
symbol: pspB
gene_biotype: protein_coding
description:
  Phage shock protein, putative inner membrane protein; The phage shock protein (psp) operon (pspABCDE) may play a significant role in the competition for survival under nutrient- or energy-limited conditions. PspB is involved in transcription regulation (By similarity); Belongs to the PspB family.


ensembl_gene_id: Z2482
symbol: pspA
gene_biotype: protein_coding
description:
  Phage shock protein, putative inner membrane protein; The phage shock protein (psp) operon (pspABCDE) may play a significant role in the competition for survival under nutrient- or energy-limited conditions. PspA negatively regulates expression of the pspABCDE promoter and of pspG through negative regulation of the psp- specific transcriptional activator PspF. Is also required for membrane integrity, efficient translocation and maintenance of the proton motive force (By similarity); Belongs to the PspA/IM30 family.


ensembl_gene_id: Z2484
symbol: pspF
gene_biotype: protein_coding
description:
  Psp operon transcriptional activator; Residues 1 to 330 of 330 are 99.69 pct identical to residues 1 to 330 of 330 from Escherichia coli K-12 Strain MG1655: B1303.


ensembl_gene_id: Z2486
symbol: goaG
gene_biotype: protein_coding
description:
  4-aminobutyrate aminotransferase; Residues 1 to 421 of 421 are 98.57 pct identical to residues 1 to 421 of 421 from Escherichia coli K-12 Strain MG1655: B1302; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: Z2487
symbol: ordL
gene_biotype: protein_coding
description:
  Probable oxidoreductase; Residues 1 to 426 of 426 are 98.82 pct identical to residues 1 to 426 of 426 from Escherichia coli K-12 Strain MG1655: B1301.


ensembl_gene_id: Z2488
symbol: aldH
gene_biotype: protein_coding
description:
  Aldehyde dehydrogenase, prefers NADP over NAD; Residues 1 to 495 of 495 are 98.38 pct identical to residues 1 to 495 of 495 from Escherichia coli K-12 Strain MG1655: B1300; Belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: Z2489
symbol: ycjC
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 185 of 185 are 99.45 pct identical to residues 1 to 185 of 185 from Escherichia coli K-12 Strain MG1655: B1299.


ensembl_gene_id: Z2490
symbol: ycjL
gene_biotype: protein_coding
description:
  Probable amidotransferase subunit; Involved in the breakdown of putrescine via hydrolysis of the gamma-glutamyl linkage of gamma-glutamyl-gamma-aminobutyrate.


ensembl_gene_id: Z2491
symbol: puuA
gene_biotype: protein_coding
description:
  Putative glutamine synthetase; Residues 1 to 498 of 498 are 99.79 pct identical to residues 1 to 498 of 498 from Escherichia coli K-12 Strain MG1655: B1297; Belongs to the glutamine synthetase family.


ensembl_gene_id: Z2492
symbol: ycjJ
gene_biotype: protein_coding
description:
  Putative amino acid/amine transport protein; Residues 1 to 461 of 461 are 99.56 pct identical to residues 19 to 479 of 479 from Escherichia coli K-12 Strain MG1655: B1296.


ensembl_gene_id: Z2493
symbol: ymjA
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 81 of 81 are 98.76 pct identical to residues 1 to 81 of 81 from Escherichia coli K-12 Strain MG1655: B1295.


ensembl_gene_id: Z2494
symbol: sapA
gene_biotype: protein_coding
description:
  Homolog of Salmonella peptide transport periplasmic protein; Residues 1 to 547 of 547 are 99.45 pct identical to residues 1 to 547 of 547 from Escherichia coli K-12 Strain MG1655: B1294.


ensembl_gene_id: Z2496
symbol: sapB
gene_biotype: protein_coding
description:
  Homolog of Salmonella peptide transport permease protein; Involved in a peptide intake transport system that plays a role in the resistance to antimicrobial peptides; Belongs to the binding-protein-dependent transport system permease family. OppBC subfamily.


ensembl_gene_id: Z2498
symbol: sapC
gene_biotype: protein_coding
description:
  Homolog of Salmonella peptide transport permease protein; Residues 1 to 296 of 296 are 99.66 pct identical to residues 1 to 296 of 296 from Escherichia coli K-12 Strain MG1655: B1292.


ensembl_gene_id: Z2499
symbol: sapD
gene_biotype: protein_coding
description:
  Putative ATP-binding protein of peptide transport system; Involved in a peptide intake transport system that plays a role in the resistance to antimicrobial peptides; Belongs to the ABC transporter superfamily.


ensembl_gene_id: Z2500
symbol: sapF
gene_biotype: protein_coding
description:
  Putative ATP-binding protein of peptide transport system; Residues 1 to 268 of 268 are 99.62 pct identical to residues 1 to 268 of 268 from Escherichia coli K-12 Strain MG1655: B1290.


ensembl_gene_id: Z2501
symbol: Z2501
gene_biotype: protein_coding
description:
  Partial putative membrane transport protein; Residues 3 to 141 of 146 are 32.65 pct identical to residues 273 to 418 of 428 from GenPept 118 : gi|6469269|emb|CAB61730.1| (AL133220) putative membrane transport protein. [Streptomyces coelicolor A3(2)].


ensembl_gene_id: Z2503
symbol: eefD
gene_biotype: protein_coding
description:
  Partial putative membrane transport protein; Residues 3 to 217 of 239 are 41.55 pct identical to residues 28 to 246 of 428 from GenPept 118 : gi|6469269|emb|CAB61730.1| (AL133220) putative membrane transport protein. [Streptomyces coelicolor A3(2)].


ensembl_gene_id: Z2504
symbol: Z2504
gene_biotype: protein_coding
description:
  Partial putative outer membrane channel protein; Residues 29 to 140 of 145 are 49.10 pct identical to residues 355 to 466 of 485 from GenPept 118 : gi|3184190|dbj|BAA28694.1| (AB011381) OprM [Pseudomonas aeruginosa].


ensembl_gene_id: Z2506
symbol: eefC
gene_biotype: protein_coding
description:
  Partial putative outer membrane channel protein; Residues 1 to 338 of 342 are 42.45 pct identical to residues 4 to 353 of 471 from GenPept 118 : gi|5764626|gb|AAD51346.1|AF173226_3 (AF173226) SmeC [Stenotrophomonas maltophilia].


ensembl_gene_id: Z2507
symbol: Z2507
gene_biotype: protein_coding
description:
  Hypothetical protein; Residues 1 to 54 of 55 are 55.55 pct identical to residues 985 to 1038 of 1049 from GenPept 118 : gi|2605914|gb|AAD12176.1| (AF029405) inner membrane transporter protein [Pseudomonas putida].


ensembl_gene_id: Z2508
symbol: acrB_2
gene_biotype: protein_coding
description:
  Putative efflux pump; Residues 5 to 977 of 1027 are 56.31 pct identical to residues 4 to 985 of 1049 from GenPept 118 : gi|1786667|gb|AAC73564.1| (AE000152) acridine efflux pump [Escherichia coli].


ensembl_gene_id: Z2509
symbol: eefA
gene_biotype: protein_coding
description:
  Putative efflux pump; Residues 12 to 369 of 373 are 51.65 pct identical to residues 20 to 381 of 397 from GenPept 118 : gi|1786668|gb|AAC73565.1| (AE000152) acridine efflux pump [Escherichia coli]; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: Z2510
symbol: eefR
gene_biotype: protein_coding
description:
  Putative transcriptional repressor; Residues 1 to 119 of 188 are 30.89 pct identical to residues 1 to 123 of 196 from GenPept 118 : gi|1787904|gb|AAC74690.1| (AE000257) repressor for uid operon [Escherichia coli].


ensembl_gene_id: Z2512
symbol: fabI
gene_biotype: protein_coding
description:
  Enoyl-[acyl-carrier-protein] reductase (NADH); Catalyzes the reduction of a carbon-carbon double bond in an enoyl moiety that is covalently linked to an acyl carrier protein (ACP). Involved in the elongation cycle of fatty acid which are used in the lipid metabolism and in the biotin biosynthesis (By similarity). Belongs to the short-chain dehydrogenases/reductases (SDR) family. FabI subfamily.


ensembl_gene_id: Z2513
symbol: yciW
gene_biotype: protein_coding
description:
  Putative oxidoreductase; Residues 1 to 401 of 401 are 98.25 pct identical to residues 1 to 401 of 401 from Escherichia coli K-12 Strain MG1655: B1287.


ensembl_gene_id: Z2514
symbol: rnb
gene_biotype: protein_coding
description:
  RNase II, mRNA degradation; Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction.


ensembl_gene_id: Z2516
symbol: yciR
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 661 of 661 are 98.94 pct identical to residues 1 to 661 of 661 from Escherichia coli K-12 Strain MG1655: B1285.


ensembl_gene_id: Z2521
symbol: yciT
gene_biotype: protein_coding
description:
  Putative DEOR-type transcriptional regulator; Residues 1 to 249 of 249 are 99.59 pct identical to residues 1 to 249 of 249 from Escherichia coli K-12 Strain MG1655: B1284.


ensembl_gene_id: Z2523
symbol: osmB
gene_biotype: protein_coding
description:
  Osmotically inducible lipoprotein; Provides resistance to osmotic stress. May be important for stationary-phase survival (By similarity).


ensembl_gene_id: Z2524
symbol: yciH
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 109 of 109 are 98.16 pct identical to residues 1 to 109 of 109 from Escherichia coli K-12 Strain MG1655: B1282.


ensembl_gene_id: Z2525
symbol: pyrF
gene_biotype: protein_coding
description:
  Orotidine-5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily.


ensembl_gene_id: Z2526
symbol: yciM
gene_biotype: protein_coding
description:
  Putative heat shock protein; Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane; Belongs to the LapB family.


ensembl_gene_id: Z2528
symbol: yciS
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Involved in the assembly of lipopolysaccharide (LPS). Belongs to the LapA family.


ensembl_gene_id: Z2529
symbol: pgpB
gene_biotype: protein_coding
description:
  Non-essential phosphatidylglycerophosphate phosphatase, membrane bound; Catalyzes the dephosphorylation of diacylglycerol diphosphate (DGPP) to phosphatidate (PA) and the subsequent dephosphorylation of PA to diacylglycerol (DAG). Also has undecaprenyl pyrophosphate phosphatase activity, required for the biosynthesis of the lipid carrier undecaprenyl phosphate. Can also use lysophosphatidic acid (LPA) and phosphatidylglycerophosphate as substrates. The pattern of activities varies according to subcellular location, PGP phosphatase activity is higher in the cytoplasmic membrane, whereas [...]


ensembl_gene_id: Z2531
symbol: ribA
gene_biotype: protein_coding
description:
  GTP cyclohydrolase II; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate.


ensembl_gene_id: Z2535
symbol: cysB
gene_biotype: protein_coding
description:
  Positive transcriptional regulator for cysteine regulon; This protein is a positive regulator of gene expression for the cysteine regulon. The inducer for CysB is N-acetylserine (By similarity).


ensembl_gene_id: Z2536
symbol: topA
gene_biotype: protein_coding
description:
  DNA topoisomerase type I, omega protein; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, th [...]


ensembl_gene_id: Z2537
symbol: yciN
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 83 of 83 are 100.00 pct identical to residues 1 to 83 of 83 from Escherichia coli K-12 Strain MG1655: B1273.


ensembl_gene_id: Z2538
symbol: sohB
gene_biotype: protein_coding
description:
  Putative protease; Residues 1 to 349 of 349 are 99.71 pct identical to residues 1 to 349 of 349 from Escherichia coli K-12 Strain MG1655: B1272.


ensembl_gene_id: Z2539
symbol: yciK
gene_biotype: protein_coding
description:
  Putative oxidoreductase; Residues 1 to 252 of 252 are 98.80 pct identical to residues 1 to 252 of 252 from Escherichia coli K-12 Strain MG1655: B1271.


ensembl_gene_id: Z2540
symbol: btuR
gene_biotype: protein_coding
description:
  cob(I)alamin adenolsyltransferase; Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids.


ensembl_gene_id: Z2541
symbol: yciL
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Responsible for synthesis of pseudouridine from uracil-2605 in 23S ribosomal RNA; Belongs to the pseudouridine synthase RsuA family.


ensembl_gene_id: Z2542
symbol: Z2542
gene_biotype: protein_coding
description:
  Hypothetical protein; Residues 1 to 278 of 527 are 95.68 pct identical to residues 1 to 278 of 631 from Escherichia coli K-12 Strain MG1655: B1268.


ensembl_gene_id: Z2543
symbol: yciO
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 218 of 218 are 100.00 pct identical to residues 1 to 218 of 218 from Escherichia coli K-12 Strain MG1655: B1267; Belongs to the SUA5 family.


ensembl_gene_id: Z2544
symbol: yciV
gene_biotype: protein_coding
description:
  Putative enzymes; Residues 1 to 293 of 293 are 98.63 pct identical to residues 1 to 293 of 293 from Escherichia coli K-12 Strain MG1655: B1266.


ensembl_gene_id: Z2546
symbol: trpE_1
gene_biotype: protein_coding
description:
  Anthranilate synthase component I; Residues 1 to 424 of 441 are 97.87 pct identical to residues 1 to 424 of 520 from GenPept 118 : gi|1787518|gb|AAC74346.1| (AE000224) anthranilate synthase component I [Escherichia coli].


ensembl_gene_id: Z2547
symbol: trpE_2
gene_biotype: protein_coding
description:
  Anthranilate synthase component I; Residues 1 to 86 of 86 are 100.00 pct identical to residues 435 to 520 of 520 from GenPept 118 : gi|1787518|gb|AAC74346.1| (AE000224) anthranilate synthase component I [Escherichia coli].


ensembl_gene_id: Z2548
symbol: trpD
gene_biotype: protein_coding
description:
  Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).


ensembl_gene_id: Z2549
symbol: trpC
gene_biotype: protein_coding
description:
  N-(5-phosphoribosyl)anthranilate isomerase and indole-3-glycerolphosphate synthetase; Bifunctional enzyme that catalyzes two sequential steps of tryptophan biosynthetic pathway. The first reaction is catalyzed by the isomerase, coded by the TrpF domain; the second reaction is catalyzed by the synthase, coded by the TrpC domain (By similarity).


ensembl_gene_id: Z2550
symbol: trpB
gene_biotype: protein_coding
description:
  Tryptophan synthase, beta protein; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.


ensembl_gene_id: Z2551
symbol: trpA
gene_biotype: protein_coding
description:
  Tryptophan synthase, alpha protein; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.


ensembl_gene_id: Z2553
symbol: yciG
gene_biotype: protein_coding
description:
  Hypothetical protein; Residues 1 to 67 of 67 are 100.00 pct identical to residues 12 to 78 of 78 from Escherichia coli K-12 Strain MG1655: B1259.


ensembl_gene_id: Z2554
symbol: yciF
gene_biotype: protein_coding
description:
  Putative structural proteins; Residues 1 to 166 of 166 are 99.39 pct identical to residues 1 to 166 of 166 from Escherichia coli K-12 Strain MG1655: B1258.


ensembl_gene_id: Z2555
symbol: yciE
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 168 of 168 are 98.80 pct identical to residues 1 to 168 of 168 from Escherichia coli K-12 Strain MG1655: B1257.


ensembl_gene_id: Z2557
symbol: Z2557
gene_biotype: protein_coding
description:
  Putative outer membrane protein; Residues 1 to 35 of 35 are 100.00 pct identical to residues 178 to 212 of 212 from Escherichia coli K-12 Strain MG1655: B1256.


ensembl_gene_id: Z2560
symbol: Z2560
gene_biotype: protein_coding
description:
  Hypothetical protein; Residues 1 to 167 of 169 are 38.92 pct identical to residues 48 to 203 of 216 from GenPept 118 : gi|4126790|dbj|BAA36748.1| (AB016764) ORF2 [Escherichia coli].


ensembl_gene_id: Z2561
symbol: Z2561
gene_biotype: protein_coding
description:
  Putative transposase (partial); Residues 1 to 54 of 54 are 82.25 pct identical to residues 1 to 62 of 342 from GenPept 118 : gi|1143207|gb|AAA84873.1| (U34305) Description: IS630 insertion element; ORF5 protein; Method: conceptual translation supplied by author [Shigella sonnei].


ensembl_gene_id: Z2562
symbol: Z2562
gene_biotype: protein_coding
description:
  Putative transposase (partial); Residues 1 to 83 of 83 are 80.72 pct identical to residues 141 to 223 of 342 from GenPept 118 : gi|1143207|gb|AAA84873.1| (U34305) Description: IS630 insertion element; ORF5 protein; Method: conceptual translation supplied by author [Shigella sonnei].


ensembl_gene_id: Z2563
symbol: Z2563
gene_biotype: protein_coding
description:
  Putative transposase (partial); Residues 1 to 60 of 60 are 80.00 pct identical to residues 229 to 288 of 343 from GenPept 118 : gi|47542|emb|CAA29389.1| (X05955) ORF (343 AA) [Shigella sonnei].


ensembl_gene_id: Z2565
symbol: espM1
gene_biotype: protein_coding
description:
  Putative chaperone protein; Residues 1 to 195 of 196 are 72.82 pct identical to residues 1 to 195 of 196 from GenPept 118 : gi|4126789|dbj|BAA36747.1| (AB016764) bfpT-regulated chaperone-like protein [Escherichia coli].


ensembl_gene_id: Z2566
symbol: intP_1
gene_biotype: protein_coding
description:
  Integrase fragment, cryptic prophage CP-933P; Residues 8 to 34 of 56 are 81.48 pct identical to residues 14 to 40 of 444 from GenPept 118 : gi|4585378|gb|AAD25406.1|AF125520_1 (AF125520) integrase [Bacteriophage 933W].


ensembl_gene_id: Z2568
symbol: intP_2
gene_biotype: protein_coding
description:
  Integrase fragment, cryptic prophage CP-933P; Residues 1 to 160 of 162 are 97.50 pct identical to residues 41 to 200 of 398 from Escherichia coli K-12 Strain MG1655: B1579.


ensembl_gene_id: Z2569
symbol: ynfA
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 108 of 108 are 98.14 pct identical to residues 1 to 108 of 108 from Escherichia coli K-12 Strain MG1655: B1582.


ensembl_gene_id: Z2570
symbol: ynfB
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 113 of 113 are 97.34 pct identical to residues 1 to 113 of 113 from Escherichia coli K-12 Strain MG1655: B1583; Belongs to the UPF0482 family.


ensembl_gene_id: Z2571
symbol: speG
gene_biotype: protein_coding
description:
  Spermidine N1-acetyltransferase; Involved in the protection against polyamine toxicity by regulating their concentration. Catalyzes the transfer of an acetyl group from acetyl coenzyme A (AcCoA) to the primary amino groups of spermidine to yield N(1)- and N(8)-acetylspermidine. Belongs to the acetyltransferase family.


ensembl_gene_id: Z2572
symbol: ynfC
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 248 of 248 are 98.79 pct identical to residues 1 to 248 of 248 from Escherichia coli K-12 Strain MG1655: B1585.


ensembl_gene_id: Z2573
symbol: ynfD
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 102 of 102 are 98.03 pct identical to residues 14 to 115 of 115 from Escherichia coli K-12 Strain MG1655: B1586.


ensembl_gene_id: Z2575
symbol: ynfF_2
gene_biotype: protein_coding
description:
  Putative oxidoreductase, major subunit; Residues 1 to 808 of 808 are 98.51 pct identical to residues 1 to 808 of 808 from Escherichia coli K-12 Strain MG1655: B1587; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: Z2576
symbol: ynfF_3
gene_biotype: protein_coding
description:
  Putative oxidoreductase, major subunit; Residues 1 to 808 of 808 are 99.50 pct identical to residues 1 to 808 of 808 from Escherichia coli K-12 Strain MG1655: B1588; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: Z2577
symbol: ynfG_2
gene_biotype: protein_coding
description:
  Putative oxidoreductase, Fe-S subunit; Residues 1 to 205 of 205 are 100.00 pct identical to residues 1 to 205 of 205 from Escherichia coli K-12 Strain MG1655: B1589.


ensembl_gene_id: Z2579
symbol: ynfH_1
gene_biotype: protein_coding
description:
  Putative DMSO reductase anchor subunit; Residues 1 to 284 of 284 are 97.88 pct identical to residues 1 to 284 of 284 from Escherichia coli K-12 Strain MG1655: B1590.


ensembl_gene_id: Z2581
symbol: dmsD
gene_biotype: protein_coding
description:
  Putative oxidoreductase component; Required for biogenesis/assembly of DMSO reductase, but not for the interaction of the DmsA signal peptide with the Tat system. May be part of a chaperone cascade complex that facilitates a folding- maturation pathway for the substrate protein.


ensembl_gene_id: Z2583
symbol: clcB
gene_biotype: protein_coding
description:
  Putative chloride channel; Probably acts as an electrical shunt for an outwardly- directed proton pump that is linked to amino acid decarboxylation, as part of the extreme acid resistance (XAR) response; Belongs to the chloride channel (TC 2.A.49) family. ClcB subfamily.


ensembl_gene_id: Z2585
symbol: bioD2
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring. Belongs to the dethiobiotin synthetase family.


ensembl_gene_id: Z2587
symbol: mlc
gene_biotype: protein_coding
description:
  Putative NAGC-like transcriptional regulator; Residues 1 to 406 of 406 are 99.75 pct identical to residues 1 to 406 of 406 from Escherichia coli K-12 Strain MG1655: B1594.


ensembl_gene_id: Z2589
symbol: ynfL
gene_biotype: protein_coding
description:
  Putative transcriptional regulator LYSR-type; Residues 1 to 297 of 297 are 99.66 pct identical to residues 1 to 297 of 297 from Escherichia coli K-12 Strain MG1655: B1595; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: Z2590
symbol: ynfM
gene_biotype: protein_coding
description:
  Putative transport protein; Residues 1 to 417 of 417 are 99.76 pct identical to residues 1 to 417 of 417 from Escherichia coli K-12 Strain MG1655: B1596.


ensembl_gene_id: Z2592
symbol: ydgD
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 273 of 273 are 99.26 pct identical to residues 1 to 273 of 273 from Escherichia coli K-12 Strain MG1655: B1598; Belongs to the peptidase S1B family.


ensembl_gene_id: Z2595
symbol: tqsA
gene_biotype: protein_coding
description:
  Putative transport protein; Residues 1 to 344 of 344 are 99.12 pct identical to residues 1 to 344 of 344 from Escherichia coli K-12 Strain MG1655: B1601.


ensembl_gene_id: Z2597
symbol: pntB
gene_biotype: protein_coding
description:
  Pyridine nucleotide transhydrogenase, beta subunit; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family.


ensembl_gene_id: Z2600
symbol: pntA
gene_biotype: protein_coding
description:
  Pyridine nucleotide transhydrogenase, alpha subunit; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane.


ensembl_gene_id: Z2603
symbol: ydgH
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 314 of 314 are 99.68 pct identical to residues 1 to 314 of 314 from Escherichia coli K-12 Strain MG1655: B1604.


ensembl_gene_id: Z2605
symbol: ydgI
gene_biotype: protein_coding
description:
  Putative arginine/ornithine antiporter; Residues 1 to 460 of 460 are 99.78 pct identical to residues 1 to 460 of 460 from Escherichia coli K-12 Strain MG1655: B1605.


ensembl_gene_id: Z2606
symbol: ydgB
gene_biotype: protein_coding
description:
  Putative oxidoreductase; Catalyzes the reduction of dihydromonapterin to tetrahydromonapterin. Also has lower activity with dihydrofolate.


ensembl_gene_id: Z2608
symbol: ydgC
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 111 of 111 are 100.00 pct identical to residues 1 to 111 of 111 from Escherichia coli K-12 Strain MG1655: B1607.


ensembl_gene_id: Z2609
symbol: rstA
gene_biotype: protein_coding
description:
  Response transcriptional regulatory protein (RstB sensor); Residues 1 to 242 of 242 are 99.58 pct identical to residues 1 to 242 of 242 from Escherichia coli K-12 Strain MG1655: B1608.


ensembl_gene_id: Z2610
symbol: rstB
gene_biotype: protein_coding
description:
  Sensor histidine protein kinase (RstA regulator); Residues 1 to 433 of 433 are 99.53 pct identical to residues 1 to 433 of 433 from Escherichia coli K-12 Strain MG1655: B1609.


ensembl_gene_id: Z2611
symbol: tus
gene_biotype: protein_coding
description:
  DNA-binding protein; Trans-acting protein required for termination of DNA replication. Binds to DNA replication terminator sequences (terA to terF) to prevent the passage of replication forks. The termination efficiency will be affected by the affinity of this protein for the terminator sequence; Belongs to the Tus family.


ensembl_gene_id: Z2614
symbol: fumC
gene_biotype: protein_coding
description:
  Fumarase C= fumarate hydratase Class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.


ensembl_gene_id: Z2615
symbol: fumA
gene_biotype: protein_coding
description:
  Fumarase A = fumarate hydratase Class I; Catalyzes the reversible hydration of fumarate to (S)-malate. Functions as an aerobic enzyme in the direction of malate formation as part of the citric acid cycle. Accounts for about 80% of the fumarase activity when the bacteria grow aerobically. To a lesser extent, also displays D-tartrate dehydratase activity in vitro, but is not able to convert (R)-malate, L-tartrate or meso-tartrate. Can also catalyze the isomerization of enol- to keto-oxaloacetate.


ensembl_gene_id: Z2616
symbol: manA
gene_biotype: protein_coding
description:
  Mannose-6-phosphate isomerase; Residues 1 to 391 of 391 are 99.48 pct identical to residues 1 to 391 of 391 from Escherichia coli K-12 Strain MG1655: B1613; Belongs to the mannose-6-phosphate isomerase type 1 family.


ensembl_gene_id: Z2617
symbol: ydgA
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 502 of 502 are 99.20 pct identical to residues 1 to 502 of 502 from Escherichia coli K-12 Strain MG1655: B1614.


ensembl_gene_id: Z2618
symbol: Z2618
gene_biotype: protein_coding
description:
  Hypothetical protein; Residues 1 to 73 of 73 are 97.26 pct identical to residues 345 to 417 of 417 from Escherichia coli K-12 Strain MG1655: B1615.


ensembl_gene_id: Z2619
symbol: Z2619
gene_biotype: protein_coding
description:
  Hypothetical protein; Residues 5 to 339 of 342 are 99.70 pct identical to residues 1 to 335 of 417 from Escherichia coli K-12 Strain MG1655: B1615.


ensembl_gene_id: Z2620
symbol: uidB
gene_biotype: protein_coding
description:
  Glucuronide permease; Residues 1 to 457 of 457 are 99.34 pct identical to residues 1 to 457 of 457 from Escherichia coli K-12 Strain MG1655: B1616.


ensembl_gene_id: Z2621
symbol: uidA_1
gene_biotype: protein_coding
description:
  Partial beta-D-glucuronidase; Residues 1 to 368 of 368 are 99.18 pct identical to residues 236 to 603 of 603 from Escherichia coli K-12 Strain MG1655: B1617.


ensembl_gene_id: Z2622
symbol: uidA_2
gene_biotype: protein_coding
description:
  Partial beta-D-glucuronidase; Residues 1 to 234 of 237 are 97.43 pct identical to residues 1 to 234 of 603 from Escherichia coli K-12 Strain MG1655: B1617; Belongs to the glycosyl hydrolase 2 family.


ensembl_gene_id: Z2624
symbol: hdhA
gene_biotype: protein_coding
description:
  NAD-dependent 7alpha-hydroxysteroid dehydrogenase, dehydroxylation of bile acids; Catalyzes the oxidation of the 7-alpha-hydroxy group of primary bile acids such as cholate.


ensembl_gene_id: Z2625
symbol: malI
gene_biotype: protein_coding
description:
  Repressor of malX and Y genes; Residues 1 to 342 of 342 are 99.70 pct identical to residues 1 to 342 of 342 from Escherichia coli K-12 Strain MG1655: B1620.


ensembl_gene_id: Z2626
symbol: malX
gene_biotype: protein_coding
description:
  PTS system, maltose and glucose-specific II ABC; Residues 1 to 530 of 530 are 99.43 pct identical to residues 1 to 530 of 530 from Escherichia coli K-12 Strain MG1655: B1621.


ensembl_gene_id: Z2627
symbol: malY
gene_biotype: protein_coding
description:
  Enzyme that may degrade or block biosynthesis of endogenous mal inducer, probably aminotrasferase; Residues 1 to 390 of 390 are 99.23 pct identical to residues 1 to 390 of 390 from Escherichia coli K-12 Strain MG1655: B1622.


ensembl_gene_id: Z2628
symbol: add
gene_biotype: protein_coding
description:
  Adenosine deaminase; Residues 1 to 333 of 333 are 99.39 pct identical to residues 1 to 333 of 333 from Escherichia coli K-12 Strain MG1655: B1623; Belongs to the metallo-dependent hydrolases superfamily. Adenosine and AMP deaminases family. Adenosine deaminase subfamily.


ensembl_gene_id: Z2629
symbol: ydgJ
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 359 of 359 are 99.72 pct identical to residues 1 to 359 of 359 from Escherichia coli K-12 Strain MG1655: B1624.


ensembl_gene_id: Z2631
symbol: cnu
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Modifies the set of genes regulated by H-NS; Hha and cnu (YdgT) increase the number of genes bound by H-NS/StpA and may also modulate the oligomerization of the H-NS/StpA-complex on DNA. The complex formed with H-NS binds to the specific 26-bp cnb site in the origin of replication oriC; Belongs to the Hha/YmoA/Cnu family.


ensembl_gene_id: Z2632
symbol: ydgK
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 154 of 154 are 98.70 pct identical to residues 1 to 154 of 154 from Escherichia coli K-12 Strain MG1655: B1626.


ensembl_gene_id: Z2633
symbol: rsxA
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Required to maintain the reduced state of SoxR.


ensembl_gene_id: Z2634
symbol: rsxB
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Required to maintain the reduced state of SoxR; Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.


ensembl_gene_id: Z2636
symbol: rsxC
gene_biotype: protein_coding
description:
  Putative membrane protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Required to maintain the reduced state of SoxR; Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily.


ensembl_gene_id: Z2639
symbol: ydgO
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Required to maintain the reduced state of SoxR; Belongs to the NqrB/RnfD family.


ensembl_gene_id: Z2640
symbol: rsxG
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Required to maintain the reduced state of SoxR; Belongs to the RnfG family.


ensembl_gene_id: Z2644
symbol: nth
gene_biotype: protein_coding
description:
  Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.


ensembl_gene_id: Z2646
symbol: ydgR
gene_biotype: protein_coding
description:
  Putative transport protein; Proton-dependent permease that transports di- and tripeptides; Belongs to the PTR2/POT transporter (TC 2.A.17) family. DtpA subfamily.


ensembl_gene_id: Z2647
symbol: gst
gene_biotype: protein_coding
description:
  Glutathionine S-transferase; Conjugation of reduced glutathione to a wide number of exogenous and endogenous hydrophobic electrophiles. Belongs to the GST superfamily. Beta family.


ensembl_gene_id: Z2648
symbol: pdxY
gene_biotype: protein_coding
description:
  Pyridoxal kinase 2 / pyridoxine kinase; Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP.


ensembl_gene_id: Z2650
symbol: tyrS
gene_biotype: protein_coding
description:
  Tyrosine tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily.


ensembl_gene_id: Z2652
symbol: pdxH
gene_biotype: protein_coding
description:
  Pyridoxinephosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP).


ensembl_gene_id: Z2653
symbol: ydhA
gene_biotype: protein_coding
description:
  Hypothetical protein; Residues 1 to 82 of 82 are 96.34 pct identical to residues 1 to 82 of 82 from Escherichia coli K-12 Strain MG1655: B1639.


ensembl_gene_id: Z2654
symbol: anmK
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the anhydro-N-acetylmuramic acid kinase family.


ensembl_gene_id: Z2655
symbol: slyB
gene_biotype: protein_coding
description:
  Putative outer membrane protein; Residues 1 to 155 of 155 are 99.35 pct identical to residues 1 to 155 of 155 from Escherichia coli K-12 Strain MG1655: B1641.


ensembl_gene_id: Z2657
symbol: slyA
gene_biotype: protein_coding
description:
  Transcriptional regulator for cryptic hemolysin; Transcription regulator that can specifically activate or repress expression of target genes; Belongs to the SlyA family.


ensembl_gene_id: Z2658
symbol: ydhI
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 78 of 78 are 100.00 pct identical to residues 1 to 78 of 78 from Escherichia coli K-12 Strain MG1655: B1643.


ensembl_gene_id: Z2659
symbol: ydhJ
gene_biotype: protein_coding
description:
  Putative membrane protein; Residues 1 to 299 of 299 are 99.66 pct identical to residues 1 to 299 of 299 from Escherichia coli K-12 Strain MG1655: B1644; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: Z2660
symbol: ydhK
gene_biotype: protein_coding
description:
  Hypothetical protein; Residues 1 to 670 of 670 are 99.40 pct identical to residues 1 to 670 of 670 from Escherichia coli K-12 Strain MG1655: B1645.


ensembl_gene_id: Z2661
symbol: sodC
gene_biotype: protein_coding
description:
  Superoxide dismutase precursor (Cu-Zn); Destroys radicals which are normally produced within the cells and which are toxic to biological systems; Belongs to the Cu-Zn superoxide dismutase family.


ensembl_gene_id: Z2664
symbol: Z2664
gene_biotype: protein_coding
description:
  Hypothetical protein; Residues 1 to 262 of 262 are 99.61 pct identical to residues 1 to 262 of 298 from Escherichia coli K-12 Strain MG1655: B1647.


ensembl_gene_id: Z2665
symbol: ydhL
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 125 of 125 are 98.40 pct identical to residues 1 to 125 of 125 from Escherichia coli K-12 Strain MG1655: B1648.


ensembl_gene_id: Z2666
symbol: nemR
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 199 of 199 are 96.98 pct identical to residues 1 to 199 of 199 from Escherichia coli K-12 Strain MG1655: B1649.


ensembl_gene_id: Z2668
symbol: nemA
gene_biotype: protein_coding
description:
  Hypothetical protein; Residues 1 to 365 of 365 are 99.72 pct identical to residues 1 to 365 of 365 from Escherichia coli K-12 Strain MG1655: B1650.


ensembl_gene_id: Z2669
symbol: gloA
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.


ensembl_gene_id: Z2671
symbol: rnt
gene_biotype: protein_coding
description:
  RNase T, degrades tRNA; Trims short 3' overhangs of a variety of RNA species, leaving a one or two nucleotide 3' overhang. Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A). Also appears to be involved in tRNA biosynthesis.


ensembl_gene_id: Z2673
symbol: lhr
gene_biotype: protein_coding
description:
  Member of ATP-dependent helicase superfamily II; Residues 1 to 1538 of 1538 are 98.56 pct identical to residues 1 to 1538 of 1538 from Escherichia coli K-12 Strain MG1655: B1653.


ensembl_gene_id: Z2676
symbol: ydhD
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Monothiol glutaredoxin involved in the biogenesis of iron- sulfur clusters.


ensembl_gene_id: Z2677
symbol: ydhO
gene_biotype: protein_coding
description:
  Putative lipoprotein; Residues 1 to 271 of 271 are 99.26 pct identical to residues 1 to 271 of 271 from Escherichia coli K-12 Strain MG1655: B1655.


ensembl_gene_id: Z2678
symbol: sodB
gene_biotype: protein_coding
description:
  Superoxide dismutase, iron; Destroys superoxide anion radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.


ensembl_gene_id: Z2679
symbol: ydhP
gene_biotype: protein_coding
description:
  Putative transport protein; Residues 1 to 389 of 389 are 99.48 pct identical to residues 1 to 389 of 389 from Escherichia coli K-12 Strain MG1655: B1657.


ensembl_gene_id: Z2681
symbol: purR
gene_biotype: protein_coding
description:
  Transcriptional repressor for pur regulon, glyA, glnB, prsA, speA; Is the main repressor of the genes involved in the de novo synthesis of purine nucleotides, regulating purB, purC, purEK, purF, purHD, purL, purMN and guaBA expression. PurR is allosterically activated to bind its cognate DNA by binding the purine corepressors, hypoxanthine or guanine, thereby effecting transcription repression.


ensembl_gene_id: Z2682
symbol: ydhB
gene_biotype: protein_coding
description:
  Putative transcriptional regulator LYSR-type; Residues 1 to 310 of 310 are 100.00 pct identical to residues 1 to 310 of 310 from Escherichia coli K-12 Strain MG1655: B1659; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: Z2685
symbol: ydhC
gene_biotype: protein_coding
description:
  Putative transport protein; Residues 1 to 403 of 403 are 99.25 pct identical to residues 1 to 403 of 403 from Escherichia coli K-12 Strain MG1655: B1660.


ensembl_gene_id: Z2686
symbol: cfa
gene_biotype: protein_coding
description:
  Cyclopropane fatty acyl phospholipid synthase; Residues 1 to 382 of 382 are 99.47 pct identical to residues 1 to 382 of 382 from Escherichia coli K-12 Strain MG1655: B1661.


ensembl_gene_id: Z2688
symbol: ribE
gene_biotype: protein_coding
description:
  Riboflavin synthase, alpha chain; Residues 1 to 213 of 213 are 99.53 pct identical to residues 1 to 213 of 213 from Escherichia coli K-12 Strain MG1655: B1662.


ensembl_gene_id: Z2690
symbol: ydhE
gene_biotype: protein_coding
description:
  Putative transport protein; Multidrug efflux pump that functions probably as a Na(+)/drug antiporter; Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family. MdtK subfamily.


ensembl_gene_id: Z2691
symbol: ydhQ
gene_biotype: protein_coding
description:
  Possible enzyme; Residues 1 to 418 of 418 are 97.36 pct identical to residues 1 to 418 of 418 from Escherichia coli K-12 Strain MG1655: B1664.


ensembl_gene_id: Z2694
symbol: ydhR
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 101 of 101 are 98.01 pct identical to residues 1 to 101 of 101 from Escherichia coli K-12 Strain MG1655: B1667.


ensembl_gene_id: Z2695
symbol: ydhS
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 534 of 534 are 99.06 pct identical to residues 1 to 534 of 534 from Escherichia coli K-12 Strain MG1655: B1668.


ensembl_gene_id: Z2696
symbol: ydhT
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 270 of 270 are 98.88 pct identical to residues 1 to 270 of 270 from Escherichia coli K-12 Strain MG1655: B1669.


ensembl_gene_id: Z2697
symbol: ydhU
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 261 of 261 are 98.08 pct identical to residues 1 to 261 of 261 from Escherichia coli K-12 Strain MG1655: B1670.


ensembl_gene_id: Z2698
symbol: ydhX
gene_biotype: protein_coding
description:
  Putative oxidoreductase, Fe-S subunit; Residues 1 to 239 of 239 are 99.16 pct identical to residues 1 to 239 of 239 from Escherichia coli K-12 Strain MG1655: B1671.


ensembl_gene_id: Z2700
symbol: ydhW
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 215 of 215 are 97.67 pct identical to residues 1 to 215 of 215 from Escherichia coli K-12 Strain MG1655: B1672.


ensembl_gene_id: Z2701
symbol: ydhV
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 700 of 700 are 99.71 pct identical to residues 1 to 700 of 700 from Escherichia coli K-12 Strain MG1655: B1673.


ensembl_gene_id: Z2702
symbol: ydhY
gene_biotype: protein_coding
description:
  Putative oxidoreductase, Fe-S subunit; Residues 1 to 208 of 208 are 100.00 pct identical to residues 1 to 208 of 208 from Escherichia coli K-12 Strain MG1655: B1674.


ensembl_gene_id: Z2703
symbol: fumD
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; In vitro catalyzes the addition of water to fumarate, forming malate. Cannot catalyze the reverse reaction. Cannot use the cis-isomer maleate as substrate; Belongs to the FumD family.


ensembl_gene_id: Z2704
symbol: pykF
gene_biotype: protein_coding
description:
  Pyruvate kinase I (formerly F), fructose stimulated; Residues 1 to 470 of 470 are 100.00 pct identical to residues 1 to 470 of 470 from Escherichia coli K-12 Strain MG1655: B1676.


ensembl_gene_id: Z2705
symbol: lpp
gene_biotype: protein_coding
description:
  Murein lipoprotein; A highly abundant outer membrane lipoprotein that controls the distance between the inner and outer membranes. The only protein known to be covalently linked to the peptidoglycan network (PGN). Also non-covalently binds the PGN. The link between the cell outer membrane and PGN contributes to maintenance of the structural and functional integrity of the cell envelope, and maintains the correct distance between the PGN and the outer membrane.


ensembl_gene_id: Z2706
symbol: ynhG
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 334 of 334 are 98.80 pct identical to residues 1 to 334 of 334 from Escherichia coli K-12 Strain MG1655: B1678.


ensembl_gene_id: Z2707
symbol: ynhA
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Participates in cysteine desulfuration mediated by SufS. Cysteine desulfuration mobilizes sulfur from L-cysteine to yield L- alanine and constitutes an essential step in sulfur metabolism for biosynthesis of a variety of sulfur-containing biomolecules. Functions as a sulfur acceptor for SufS, by mediating the direct transfer of the sulfur atom from the S-sulfanylcysteine of SufS, an intermediate product of cysteine desulfuration process; Belongs to the SufE family.


ensembl_gene_id: Z2708
symbol: sufS
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Cysteine desulfurases mobilize the sulfur from L-cysteine to yield L-alanine, an essential step in sulfur metabolism for biosynthesis of a variety of sulfur-containing biomolecules. Component of the suf operon, which is activated and required under specific conditions such as oxidative stress and iron limitation. Acts as a potent selenocysteine lyase in vitro, that mobilizes selenium from L- selenocysteine. Selenocysteine lyase activity is however unsure in vivo.


ensembl_gene_id: Z2709
symbol: ynhC
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 423 of 423 are 98.10 pct identical to residues 1 to 423 of 423 from Escherichia coli K-12 Strain MG1655: B1681.


ensembl_gene_id: Z2710
symbol: ynhD
gene_biotype: protein_coding
description:
  Putative ATP-binding component of a transport system; Residues 1 to 248 of 248 are 99.59 pct identical to residues 1 to 248 of 248 from Escherichia coli K-12 Strain MG1655: B1682.


ensembl_gene_id: Z2711
symbol: ynhE
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 508 of 508 are 99.80 pct identical to residues 1 to 508 of 508 from Escherichia coli K-12 Strain MG1655: B1683.


ensembl_gene_id: Z2712
symbol: ydiC
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 122 of 122 are 99.18 pct identical to residues 1 to 122 of 122 from Escherichia coli K-12 Strain MG1655: B1684; Belongs to the HesB/IscA family.


ensembl_gene_id: Z2713
symbol: ydiH
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 89 of 89 are 100.00 pct identical to residues 1 to 89 of 89 from Escherichia coli K-12 Strain MG1655: B1685.


ensembl_gene_id: Z2714
symbol: menI
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Catalyzes the hydrolysis of 1,4-dihydroxy-2-naphthoyl-CoA (DHNA-CoA) to 1,4-dihydroxy-2-naphthoate (DHNA).


ensembl_gene_id: Z2715
symbol: ydiJ
gene_biotype: protein_coding
description:
  Putative oxidase; Residues 1 to 1018 of 1018 are 99.60 pct identical to residues 1 to 1018 of 1018 from Escherichia coli K-12 Strain MG1655: B1687.


ensembl_gene_id: Z2716
symbol: ydiK
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 370 of 370 are 99.72 pct identical to residues 1 to 370 of 370 from Escherichia coli K-12 Strain MG1655: B1688.


ensembl_gene_id: Z2717
symbol: ydiL
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 127 of 127 are 97.63 pct identical to residues 1 to 127 of 127 from Escherichia coli K-12 Strain MG1655: B1689.


ensembl_gene_id: Z2718
symbol: ydiM
gene_biotype: protein_coding
description:
  Putative transport system permease protein; Residues 1 to 404 of 404 are 99.00 pct identical to residues 1 to 404 of 404 from Escherichia coli K-12 Strain MG1655: B1690.


ensembl_gene_id: Z2719
symbol: ydiN
gene_biotype: protein_coding
description:
  Putative amino acid/amine transport protein; Residues 1 to 423 of 423 are 99.29 pct identical to residues 1 to 423 of 423 from Escherichia coli K-12 Strain MG1655: B1691.


ensembl_gene_id: Z2720
symbol: ydiB
gene_biotype: protein_coding
description:
  Putative oxidoreductase; The actual biological function of YdiB remains unclear, nor is it known whether 3-dehydroshikimate or quinate represents the natural substrate. Catalyzes the reversible NAD-dependent reduction of both 3-dehydroshikimate (DHSA) and 3-dehydroquinate to yield shikimate (SA) and quinate, respectively. It can use both NAD or NADP for catalysis, however it has higher catalytic efficiency with NAD.


ensembl_gene_id: Z2721
symbol: aroD
gene_biotype: protein_coding
description:
  3-dehydroquinate dehydratase; Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis- dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3-dehydroshikimate. Belongs to the type-I 3-dehydroquinase family.


ensembl_gene_id: Z2722
symbol: ydiF
gene_biotype: protein_coding
description:
  Putative enzyme; CoA transferase having broad substrate specificity for short- chain acyl-CoA thioesters with the activity decreasing when the length of the carboxylic acid chain exceeds four carbons. Exhibits high activity with acetoacetyl-CoA, propionyl-CoA, crotonoyl-CoA or butyryl- CoA as donors, with acetate as an acceptor. When acetyl-CoA is used as the donor, propionate, acetoacetate, butyrate, isobutyrate, and 4- hydroxybutyrate can be utilized as acceptors but not isovalerate. May play a role in short-chain fatty acid metabolism in E.coli.


ensembl_gene_id: Z2723
symbol: ydiO
gene_biotype: protein_coding
description:
  Putative oxidoreductase; Residues 1 to 401 of 401 are 99.75 pct identical to residues 1 to 401 of 401 from Escherichia coli K-12 Strain MG1655: B1695; Belongs to the acyl-CoA dehydrogenase family.


ensembl_gene_id: Z2724
symbol: ydiP
gene_biotype: protein_coding
description:
  Putative ARAC-type regulatory protein; Residues 1 to 303 of 303 are 99.33 pct identical to residues 1 to 303 of 303 from Escherichia coli K-12 Strain MG1655: B1696.


ensembl_gene_id: Z2726
symbol: ydiQ
gene_biotype: protein_coding
description:
  Putative transport protein; Residues 1 to 254 of 254 are 97.63 pct identical to residues 1 to 254 of 254 from Escherichia coli K-12 Strain MG1655: B1697.


ensembl_gene_id: Z2727
symbol: ydiR
gene_biotype: protein_coding
description:
  Putative flavoprotein; Residues 1 to 312 of 312 are 99.03 pct identical to residues 1 to 312 of 312 from Escherichia coli K-12 Strain MG1655: B1698.


ensembl_gene_id: Z2730
symbol: ydiD
gene_biotype: protein_coding
description:
  Putative ligase/synthetase; Residues 1 to 566 of 566 are 98.76 pct identical to residues 1 to 566 of 566 from Escherichia coli K-12 Strain MG1655: B1701.


ensembl_gene_id: Z2731
symbol: ppsA
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family.


ensembl_gene_id: Z2732
symbol: ydiA
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the phosphoenolpyruvate synthase (PEPS) by catalyzing its phosphorylation/dephosphorylation.


ensembl_gene_id: Z2733
symbol: aroH
gene_biotype: protein_coding
description:
  3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (DAHP synthetase, tryptophan repressible); Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino- heptulosonate-7-phosphate (DAHP).


ensembl_gene_id: Z2734
symbol: ydiE
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 63 of 63 are 100.00 pct identical to residues 1 to 63 of 63 from Escherichia coli K-12 Strain MG1655: B1705; To Y.enterocolitica HemP.


ensembl_gene_id: Z2735
symbol: selO
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Catalyzes the transfer of adenosine 5'-monophosphate (AMP) to Ser, Thr or Tyr residues of target proteins (AMPylation).


ensembl_gene_id: Z2736
symbol: ydiV
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 237 of 237 are 99.57 pct identical to residues 1 to 237 of 237 from Escherichia coli K-12 Strain MG1655: B1707.


ensembl_gene_id: Z2737
symbol: nlpC
gene_biotype: protein_coding
description:
  Lipoprotein; Residues 1 to 154 of 154 are 98.70 pct identical to residues 1 to 154 of 154 from Escherichia coli K-12 Strain MG1655: B1708.


ensembl_gene_id: Z2738
symbol: btuD
gene_biotype: protein_coding
description:
  ATP-binding component of vitamin B12 transport system; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Responsible for energy coupling to the transport system.


ensembl_gene_id: Z2739
symbol: btuE
gene_biotype: protein_coding
description:
  Vitamin B12 transport; Non-specific peroxidase that can use thioredoxin or glutathione as a reducing agent.


ensembl_gene_id: Z2740
symbol: btuC
gene_biotype: protein_coding
description:
  Vitamin B12 transport permease protein; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Involved in the translocation of the substrate across the membrane (By similarity).


ensembl_gene_id: Z2741
symbol: himA
gene_biotype: protein_coding
description:
  Integration host factor (IHF), alpha subunit; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family.


ensembl_gene_id: Z2742
symbol: pheT
gene_biotype: protein_coding
description:
  Phenylalanine tRNA synthetase, beta-subunit; Residues 1 to 795 of 795 are 99.62 pct identical to residues 1 to 795 of 795 from Escherichia coli K-12 Strain MG1655: B1713; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.


ensembl_gene_id: Z2743
symbol: pheS
gene_biotype: protein_coding
description:
  Phenylalanine tRNA synthetase, alpha-subunit; Residues 1 to 327 of 327 are 99.69 pct identical to residues 1 to 327 of 327 from Escherichia coli K-12 Strain MG1655: B1714; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.


ensembl_gene_id: Z2745
symbol: rplT
gene_biotype: protein_coding
description:
  50S ribosomal subunit protein L20, and regulator; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit (By similarity).


ensembl_gene_id: Z2746
symbol: rpmI
gene_biotype: protein_coding
description:
  50S ribosomal subunit protein A; Residues 1 to 65 of 65 are 100.00 pct identical to residues 1 to 65 of 65 from Escherichia coli K-12 Strain MG1655: B1717; Belongs to the bacterial ribosomal protein bL35 family.


ensembl_gene_id: Z2747
symbol: infC
gene_biotype: protein_coding
description:
  Initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.


ensembl_gene_id: Z2748
symbol: thrS
gene_biotype: protein_coding
description:
  Threonine tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr). Also edits incorrectly charged L-seryl-tRNA(Thr); Belongs to the class-II aminoacyl-tRNA synthetase family.


ensembl_gene_id: Z2749
symbol: espL1
gene_biotype: protein_coding
description:
  Hypothetical protein; Residues 163 to 632 of 632 are 97.44 pct identical to residues 2 to 471 of 471 from Escherichia coli K-12 Strain MG1655: B1721.


ensembl_gene_id: Z2751
symbol: ydiY
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 252 of 252 are 99.60 pct identical to residues 1 to 252 of 252 from Escherichia coli K-12 Strain MG1655: B1722.


ensembl_gene_id: Z2752
symbol: pfkB
gene_biotype: protein_coding
description:
  6-phosphofructokinase II; Residues 1 to 309 of 309 are 99.35 pct identical to residues 1 to 309 of 309 from Escherichia coli K-12 Strain MG1655: B1723; Belongs to the carbohydrate kinase PfkB family.


ensembl_gene_id: Z2753
symbol: ydiZ
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 96 of 96 are 97.91 pct identical to residues 1 to 96 of 96 from Escherichia coli K-12 Strain MG1655: B1724.


ensembl_gene_id: Z2754
symbol: yniA
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Ketoamine kinase that phosphorylates ketoamines on the third carbon of the sugar moiety to generate ketoamine 3-phosphate.


ensembl_gene_id: Z2755
symbol: yniB
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 178 of 178 are 97.75 pct identical to residues 1 to 178 of 178 from Escherichia coli K-12 Strain MG1655: B1726.


ensembl_gene_id: Z2756
symbol: hxpB
gene_biotype: protein_coding
description:
  Putative phosphatase (YniC); Sugar-phosphate phosphohydrolase that catalyzes the dephosphorylation of D-mannitol 1-phosphate and D-sorbitol 6-phosphate. Also catalyzes the dephosphorylation of 2-deoxyglucose 6-phosphate (2dGlu6P); this is a biologically important activity in vivo since it contributes to the elimination of this toxic compound and plays an important role in the resistance of E.coli to 2-deoxyglucose. Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family.


ensembl_gene_id: Z2757
symbol: ydjM
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 200 of 200 are 99.50 pct identical to residues 1 to 200 of 200 from Escherichia coli K-12 Strain MG1655: B1728.


ensembl_gene_id: Z2758
symbol: ydjN
gene_biotype: protein_coding
description:
  Residues 1 to 463 of 463 are 99.56 pct identical to residues 1 to 463 of 463 from Escherichia coli K-12 Strain MG1655: B1729; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: Z2759
symbol: ydjO
gene_biotype: protein_coding
description:
  Hypothetical protein; Residues 1 to 233 of 251 are 99.14 pct identical to residues 5 to 237 of 271 from Escherichia coli K-12 Strain MG1655: B1730.


ensembl_gene_id: Z2760
symbol: cedA
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Activates the cell division inhibited by chromosomal DNA over-replication.


ensembl_gene_id: Z2763
symbol: ydjC
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Involved in the degradation of chitin. ChbG is essential for growth on the acetylated chitooligosaccharides chitobiose and chitotriose but is dispensable for growth on cellobiose and chitosan dimer, the deacetylated form of chitobiose. Deacetylation of chitobiose-6-P and chitotriose-6-P is necessary for both the activation of the chb promoter by the regulatory protein ChbR and the hydrolysis of phosphorylated beta-glucosides by the phospho-beta-glucosidase ChbF. Catalyzes the removal of only one acetyl group from chitobiose-6-P to yield monoacetylchitobiose-6 [...]


ensembl_gene_id: Z2764
symbol: celF
gene_biotype: protein_coding
description:
  Phospho-beta-glucosidase; Residues 1 to 450 of 450 are 98.88 pct identical to residues 1 to 450 of 450 from Escherichia coli K-12 Strain MG1655: B1734.


ensembl_gene_id: Z2765
symbol: celD
gene_biotype: protein_coding
description:
  Negative transcriptional regulator of cel operon; Residues 1 to 280 of 280 are 99.64 pct identical to residues 1 to 280 of 280 from Escherichia coli K-12 Strain MG1655: B1735.


ensembl_gene_id: Z2766
symbol: celC
gene_biotype: protein_coding
description:
  PEP-dependent phosphotransferase enzyme III for cellobiose, arbutin, and salicin; The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. The enzyme II ChbABC PTS system is involved in the transport of the chitin disaccharide N,N'-diacetylchitobiose (GlcNAc2).


ensembl_gene_id: Z2767
symbol: celB
gene_biotype: protein_coding
description:
  PEP-dependent phosphotransferase enzyme II for cellobiose, arbutin, and salicin; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.


ensembl_gene_id: Z2768
symbol: celA
gene_biotype: protein_coding
description:
  PEP-dependent phosphotransferase enzyme IV for cellobiose, arbutin, and salicin; The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. The enzyme II ChbABC PTS system is involved in the transport of the chitin disaccharide N,N'-diacetylchitobiose (GlcNAc2).


ensembl_gene_id: Z2769
symbol: osmE
gene_biotype: protein_coding
description:
  Activator of ntrL gene; Residues 1 to 112 of 112 are 100.00 pct identical to residues 1 to 112 of 112 from Escherichia coli K-12 Strain MG1655: B1739.


ensembl_gene_id: Z2770
symbol: nadE
gene_biotype: protein_coding
description:
  NAD synthetase, prefers NH3 over glutamine; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source.


ensembl_gene_id: Z2771
symbol: cho
gene_biotype: protein_coding
description:
  Putative excinuclease subunit; Incises the DNA at the 3' side of a lesion during nucleotide excision repair. Incises the DNA farther away from the lesion than UvrC. Not able to incise the 5' site of a lesion. When a lesion remains because UvrC is not able to induce the 3' incision, Cho incises the DNA. Then UvrC makes the 5' incision. The combined action of Cho and UvrC broadens the substrate range of nucleotide excision repair (By similarity).


ensembl_gene_id: Z2774
symbol: ves
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 212 of 212 are 98.58 pct identical to residues 1 to 212 of 212 from Escherichia coli K-12 Strain MG1655: B1742; Belongs to the Ves family.


ensembl_gene_id: Z2775
symbol: spy
gene_biotype: protein_coding
description:
  Periplasmic protein related to spheroblast formation; An ATP-independent periplasmic chaperone, decreases protein aggregation and helps protein refolding. Binds substrate over a large region. Protect proteins in vitro against tannin inactivation; tannins have antimicrobial activity. Overexpression enhances the stability of otherwise unstable periplasmic proteins. Belongs to the CpxP/Spy family.


ensembl_gene_id: Z2776
symbol: ydjS
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Transforms N(2)-succinylglutamate into succinate and glutamate; Belongs to the AspA/AstE family. Succinylglutamate desuccinylase subfamily.


ensembl_gene_id: Z2777
symbol: astB
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Catalyzes the hydrolysis of N(2)-succinylarginine into N(2)- succinylornithine, ammonia and CO(2).


ensembl_gene_id: Z2778
symbol: astD
gene_biotype: protein_coding
description:
  Putative aldehyde dehydrogenase; Catalyzes the NAD-dependent reduction of succinylglutamate semialdehyde into succinylglutamate.


ensembl_gene_id: Z2779
symbol: astA
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Catalyzes the transfer of succinyl-CoA to arginine to produce N(2)-succinylarginine.


ensembl_gene_id: Z2780
symbol: cstC
gene_biotype: protein_coding
description:
  Acetylornithine delta-aminotransferase; Catalyzes the transamination of N(2)-succinylornithine and alpha-ketoglutarate into N(2)-succinylglutamate semialdehyde and glutamate. Can also act as an acetylornithine aminotransferase. Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. AstC subfamily.


ensembl_gene_id: Z2781
symbol: xthA
gene_biotype: protein_coding
description:
  Exonuclease III; Residues 1 to 268 of 268 are 98.13 pct identical to residues 1 to 268 of 268 from Escherichia coli K-12 Strain MG1655: B1749.


ensembl_gene_id: Z2782
symbol: ydjX
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 252 of 252 are 97.22 pct identical to residues 1 to 252 of 252 from Escherichia coli K-12 Strain MG1655: B1750.


ensembl_gene_id: Z2783
symbol: ydjY
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 279 of 279 are 97.84 pct identical to residues 1 to 279 of 279 from Escherichia coli K-12 Strain MG1655: B1751.


ensembl_gene_id: Z2784
symbol: ydjZ
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 235 of 235 are 98.72 pct identical to residues 1 to 235 of 235 from Escherichia coli K-12 Strain MG1655: B1752.


ensembl_gene_id: Z2785
symbol: ynjA
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 182 of 182 are 98.90 pct identical to residues 1 to 182 of 182 from Escherichia coli K-12 Strain MG1655: B1753.


ensembl_gene_id: Z2786
symbol: ynjB
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 389 of 389 are 98.20 pct identical to residues 1 to 389 of 389 from Escherichia coli K-12 Strain MG1655: B1754.


ensembl_gene_id: Z2787
symbol: ynjC
gene_biotype: protein_coding
description:
  Putative transport system permease protein; Residues 1 to 496 of 496 are 96.37 pct identical to residues 1 to 496 of 496 from Escherichia coli K-12 Strain MG1655: B1755.


ensembl_gene_id: Z2788
symbol: ynjD
gene_biotype: protein_coding
description:
  Putative ATP-binding component of a transport system; Residues 1 to 217 of 217 are 97.69 pct identical to residues 1 to 217 of 217 from Escherichia coli K-12 Strain MG1655: B1756.


ensembl_gene_id: Z2789
symbol: ynjE
gene_biotype: protein_coding
description:
  Putative thiosulfate sulfur transferase; Residues 1 to 440 of 440 are 98.18 pct identical to residues 1 to 440 of 440 from Escherichia coli K-12 Strain MG1655: B1757.


ensembl_gene_id: Z2790
symbol: ynjF
gene_biotype: protein_coding
description:
  Putative cytochrome oxidase; Residues 1 to 208 of 208 are 98.55 pct identical to residues 1 to 208 of 208 from Escherichia coli K-12 Strain MG1655: B1758; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: Z2791
symbol: nudG
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 135 of 135 are 98.51 pct identical to residues 1 to 135 of 135 from Escherichia coli K-12 Strain MG1655: B1759; Belongs to the Nudix hydrolase family.


ensembl_gene_id: Z2792
symbol: ynjH
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 90 of 90 are 96.66 pct identical to residues 1 to 90 of 90 from Escherichia coli K-12 Strain MG1655: B1760.


ensembl_gene_id: Z2793
symbol: gdhA
gene_biotype: protein_coding
description:
  NADP-specific glutamate dehydrogenase; Residues 1 to 447 of 447 are 99.32 pct identical to residues 1 to 447 of 447 from Escherichia coli K-12 Strain MG1655: B1761; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.


ensembl_gene_id: Z2795
symbol: ynjI
gene_biotype: protein_coding
description:
  Hypothetical protein; Residues 1 to 294 of 294 are 99.31 pct identical to residues 94 to 387 of 387 from Escherichia coli K-12 Strain MG1655: B1762.


ensembl_gene_id: Z2796
symbol: topB
gene_biotype: protein_coding
description:
  DNA topoisomerase III; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA su [...]


ensembl_gene_id: Z2797
symbol: selD
gene_biotype: protein_coding
description:
  Selenophosphate synthase, H(2)Se added to acrylyl-tRNA; Synthesizes selenophosphate from selenide and ATP.


ensembl_gene_id: Z2798
symbol: ydjA
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 183 of 183 are 100.00 pct identical to residues 1 to 183 of 183 from Escherichia coli K-12 Strain MG1655: B1765; Belongs to the nitroreductase family.


ensembl_gene_id: Z2799
symbol: sppA
gene_biotype: protein_coding
description:
  Protease IV, a signal peptide peptidase; Residues 1 to 618 of 618 are 99.19 pct identical to residues 1 to 618 of 618 from Escherichia coli K-12 Strain MG1655: B1766.


ensembl_gene_id: Z2800
symbol: Orf-2
gene_biotype: protein_coding
description:
  Orf; Residues 41 to 267 of 267 are 35.37 pct identical to residues 11 to 233 of 233 from GenPept 118 : gi|6967539|emb|CAB72527.1| (AL139074) putative periplasmic protein [Campylobacter jejuni].


ensembl_gene_id: Z2801
symbol: ansA
gene_biotype: protein_coding
description:
  Cytoplasmic L-asparaginase I; Residues 1 to 338 of 338 are 100.00 pct identical to residues 1 to 338 of 338 from Escherichia coli K-12 Strain MG1655: B1767; Belongs to the asparaginase 1 family.


ensembl_gene_id: Z2802
symbol: ydjB
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 219 of 219 are 99.08 pct identical to residues 1 to 219 of 219 from Escherichia coli K-12 Strain MG1655: B1768.


ensembl_gene_id: Z2803
symbol: ydjE
gene_biotype: protein_coding
description:
  Putative transport protein; Residues 1 to 416 of 416 are 99.75 pct identical to residues 37 to 452 of 452 from Escherichia coli K-12 Strain MG1655: B1769.


ensembl_gene_id: Z2804
symbol: Z2804
gene_biotype: protein_coding
description:
  Unknown protein encoded within IS629; Residues 1 to 108 of 108 are 99.07 pct identical to residues 1 to 108 of 108 from GenPept 118 : gi|6453799|gb|AAF09023.1| (AF139596) unknown [Shigella flexneri].


ensembl_gene_id: Z2806
symbol: Z2806
gene_biotype: protein_coding
description:
  Putative transposase; Residues 1 to 295 of 295 are 98.30 pct identical to residues 1 to 295 of 295 from GenPept 118 : gi|3822133|gb|AAC70087.1| (AF074613) transposase [Escherichia coli O157:H7].


ensembl_gene_id: Z2808
symbol: ydjF
gene_biotype: protein_coding
description:
  Putative DEOR-type transcriptional regulator; Residues 1 to 252 of 252 are 99.20 pct identical to residues 1 to 252 of 252 from Escherichia coli K-12 Strain MG1655: B1770.


ensembl_gene_id: Z2809
symbol: ydjG
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 326 of 326 are 98.15 pct identical to residues 1 to 326 of 326 from Escherichia coli K-12 Strain MG1655: B1771.


ensembl_gene_id: Z2810
symbol: ydjH
gene_biotype: protein_coding
description:
  Putative kinase; Residues 1 to 310 of 310 are 96.82 pct identical to residues 8 to 322 of 322 from Escherichia coli K-12 Strain MG1655: B1772.


ensembl_gene_id: Z2811
symbol: ydjI
gene_biotype: protein_coding
description:
  Putative aldolase; Residues 1 to 278 of 278 are 99.64 pct identical to residues 1 to 278 of 278 from Escherichia coli K-12 Strain MG1655: B1773.


ensembl_gene_id: Z2812
symbol: ydjJ
gene_biotype: protein_coding
description:
  Putative oxidoreductase; Residues 1 to 347 of 347 are 99.42 pct identical to residues 1 to 347 of 347 from Escherichia coli K-12 Strain MG1655: B1774.


ensembl_gene_id: Z2813
symbol: ydjK
gene_biotype: protein_coding
description:
  Putative transport protein; Residues 1 to 459 of 459 are 99.34 pct identical to residues 1 to 459 of 459 from Escherichia coli K-12 Strain MG1655: B1775.


ensembl_gene_id: Z2815
symbol: ydjL
gene_biotype: protein_coding
description:
  Putative oxidoreductase; Residues 1 to 358 of 358 are 99.72 pct identical to residues 1 to 358 of 358 from Escherichia coli K-12 Strain MG1655: B1776.


ensembl_gene_id: Z2816
symbol: yeaC
gene_biotype: protein_coding
description:
  Hypothetical protein; Residues 1 to 105 of 105 are 97.14 pct identical to residues 1 to 105 of 105 from Escherichia coli K-12 Strain MG1655: B1777.


ensembl_gene_id: Z2817
symbol: yeaA
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 137 of 137 are 100.00 pct identical to residues 1 to 137 of 137 from Escherichia coli K-12 Strain MG1655: B1778; Belongs to the MsrB Met sulfoxide reductase family.


ensembl_gene_id: Z2818
symbol: gapA
gene_biotype: protein_coding
description:
  Glyceraldehyde-3-phosphate dehydrogenase A; Catalyzes the oxidative phosphorylation of glyceraldehyde 3- phosphate (G3P) to 1,3-bisphosphoglycerate (BPG) using the cofactor NAD. The first reaction step involves the formation of a hemiacetal intermediate between G3P and a cysteine residue, and this hemiacetal intermediate is then oxidized to a thioester, with concomitant reduction of NAD to NADH. The reduced NADH is then exchanged with the second NAD, and the thioester is attacked by a nucleophilic inorganic phosphate to produce BPG.


ensembl_gene_id: Z2820
symbol: yeaD
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 301 of 301 are 97.00 pct identical to residues 1 to 301 of 301 from Escherichia coli K-12 Strain MG1655: B1780; Belongs to the glucose-6-phosphate 1-epimerase family.


ensembl_gene_id: Z2821
symbol: yeaE
gene_biotype: protein_coding
description:
  Putative an aldehyde reductase; Residues 1 to 284 of 284 are 99.29 pct identical to residues 1 to 284 of 284 from Escherichia coli K-12 Strain MG1655: B1781.


ensembl_gene_id: Z2822
symbol: yeaF
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 248 of 248 are 99.19 pct identical to residues 1 to 248 of 248 from Escherichia coli K-12 Strain MG1655: B1782.


ensembl_gene_id: Z2823
symbol: yeaG
gene_biotype: protein_coding
description:
  Hypothetical protein; Residues 1 to 644 of 644 are 100.00 pct identical to residues 1 to 644 of 644 from Escherichia coli K-12 Strain MG1655: B1783; Belongs to the PrkA family.


ensembl_gene_id: Z2824
symbol: yeaH
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 426 of 427 are 100.00 pct identical to residues 1 to 426 of 427 from Escherichia coli K-12 Strain MG1655: B1784; Belongs to the UPF0229 family.


ensembl_gene_id: Z2825
symbol: yeaI
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 444 of 444 are 100.00 pct identical to residues 48 to 491 of 491 from Escherichia coli K-12 Strain MG1655: B1785.


ensembl_gene_id: Z2826
symbol: yeaJ
gene_biotype: protein_coding
description:
  Hypothetical protein; Residues 1 to 496 of 496 are 99.59 pct identical to residues 61 to 556 of 556 from Escherichia coli K-12 Strain MG1655: B1786.


ensembl_gene_id: Z2827
symbol: yeaK
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 167 of 167 are 100.00 pct identical to residues 1 to 167 of 167 from Escherichia coli K-12 Strain MG1655: B1787.


ensembl_gene_id: Z2828
symbol: yoaI
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 50 of 50 are 98.00 pct identical to residues 1 to 50 of 50 from Escherichia coli K-12 Strain MG1655: B1788.


ensembl_gene_id: Z2829
symbol: yeaL
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 148 of 148 are 99.32 pct identical to residues 1 to 148 of 148 from Escherichia coli K-12 Strain MG1655: B1789.


ensembl_gene_id: Z2831
symbol: yeaM
gene_biotype: protein_coding
description:
  Putative AraC-type regulatory protein; Residues 1 to 273 of 273 are 98.16 pct identical to residues 1 to 273 of 273 from Escherichia coli K-12 Strain MG1655: B1790.


ensembl_gene_id: Z2833
symbol: yeaN
gene_biotype: protein_coding
description:
  Putative amino acid/amine transport protein; Residues 1 to 393 of 393 are 99.49 pct identical to residues 1 to 393 of 393 from Escherichia coli K-12 Strain MG1655: B1791.


ensembl_gene_id: Z2834
symbol: yeaO
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 122 of 122 are 98.36 pct identical to residues 1 to 122 of 122 from Escherichia coli K-12 Strain MG1655: B1792.


ensembl_gene_id: Z2835
symbol: yoaF
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 84 of 84 are 98.80 pct identical to residues 1 to 84 of 84 from Escherichia coli K-12 Strain MG1655: B1793.


ensembl_gene_id: Z2836
symbol: Z2836
gene_biotype: protein_coding
description:
  Hypothetical protein; Residues 1 to 282 of 282 are 98.58 pct identical to residues 44 to 325 of 384 from Escherichia coli K-12 Strain MG1655: B1794.


ensembl_gene_id: Z2837
symbol: yeaQ
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 82 of 82 are 100.00 pct identical to residues 1 to 82 of 82 from Escherichia coli K-12 Strain MG1655: B1795.


ensembl_gene_id: Z2838
symbol: yoaG
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 60 of 60 are 100.00 pct identical to residues 1 to 60 of 60 from Escherichia coli K-12 Strain MG1655: B1796.


ensembl_gene_id: Z2839
symbol: yeaR
gene_biotype: protein_coding
description:
  Hypothetical protein; Residues 1 to 119 of 119 are 100.00 pct identical to residues 1 to 119 of 119 from Escherichia coli K-12 Strain MG1655: B1797.


ensembl_gene_id: Z2842
symbol: yeaT
gene_biotype: protein_coding
description:
  Putative transcriptional regulator LYSR-type; Residues 1 to 314 of 314 are 99.36 pct identical to residues 1 to 314 of 314 from Escherichia coli K-12 Strain MG1655: B1799; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: Z2843
symbol: yeaU
gene_biotype: protein_coding
description:
  Putative tartrate dehydrogenase; Residues 1 to 361 of 361 are 99.72 pct identical to residues 1 to 361 of 361 from Escherichia coli K-12 Strain MG1655: B1800.


ensembl_gene_id: Z2844
symbol: yeaV
gene_biotype: protein_coding
description:
  Putative transport protein; Residues 1 to 481 of 481 are 100.00 pct identical to residues 1 to 481 of 481 from Escherichia coli K-12 Strain MG1655: B1801.


ensembl_gene_id: Z2847
symbol: rnd
gene_biotype: protein_coding
description:
  RNase D, processes tRNA precursor; Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides; Belongs to the RNase D family.


ensembl_gene_id: Z2848
symbol: fadD
gene_biotype: protein_coding
description:
  acyl-CoA synthetase, long-chain-fatty-acid--CoA ligase; Catalyzes the esterification, concomitant with transport, of exogenous long-chain fatty acids into metabolically active CoA thioesters for subsequent degradation or incorporation into phospholipids.


ensembl_gene_id: Z2849
symbol: yeaY
gene_biotype: protein_coding
description:
  Putative outer membrane protein; Residues 1 to 193 of 193 are 98.96 pct identical to residues 1 to 193 of 193 from Escherichia coli K-12 Strain MG1655: B1806.


ensembl_gene_id: Z2850
symbol: yeaZ
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 231 of 231 are 99.13 pct identical to residues 1 to 231 of 231 from Escherichia coli K-12 Strain MG1655: B1807.


ensembl_gene_id: Z2851
symbol: yoaA
gene_biotype: protein_coding
description:
  Putative enzyme; Residues 1 to 636 of 636 are 99.84 pct identical to residues 1 to 636 of 636 from Escherichia coli K-12 Strain MG1655: B1808.


ensembl_gene_id: Z2852
symbol: yoaB
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 130 of 130 are 99.23 pct identical to residues 1 to 130 of 130 from Escherichia coli K-12 Strain MG1655: B1809.


ensembl_gene_id: Z2853
symbol: yoaC
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 119 of 119 are 100.00 pct identical to residues 1 to 119 of 119 from Escherichia coli K-12 Strain MG1655: B1810.


ensembl_gene_id: Z2854
symbol: yoaH
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 59 of 59 are 100.00 pct identical to residues 1 to 59 of 59 from Escherichia coli K-12 Strain MG1655: B1811; Belongs to the UPF0181 family.


ensembl_gene_id: Z2855
symbol: pabB
gene_biotype: protein_coding
description:
  P-aminobenzoate synthetase, component I; Residues 1 to 453 of 453 are 97.35 pct identical to residues 1 to 453 of 453 from Escherichia coli K-12 Strain MG1655: B1812.


ensembl_gene_id: Z2856
symbol: yeaB
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Probably mediates the hydrolysis of some nucleoside diphosphate derivatives; Belongs to the Nudix hydrolase family. PCD1 subfamily.


ensembl_gene_id: Z2857
symbol: sdaA
gene_biotype: protein_coding
description:
  L-serine deaminase; Residues 1 to 454 of 454 are 99.77 pct identical to residues 1 to 454 of 454 from Escherichia coli K-12 Strain MG1655: B1814; Belongs to the iron-sulfur dependent L-serine dehydratase family.


ensembl_gene_id: Z2858
symbol: yoaD
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 542 of 542 are 99.07 pct identical to residues 1 to 542 of 542 from Escherichia coli K-12 Strain MG1655: B1815.


ensembl_gene_id: Z2859
symbol: yoaE
gene_biotype: protein_coding
description:
  Putative transport protein; Residues 1 to 518 of 518 are 100.00 pct identical to residues 1 to 518 of 518 from Escherichia coli K-12 Strain MG1655: B1816.


ensembl_gene_id: Z2860
symbol: manX
gene_biotype: protein_coding
description:
  PTS enzyme IIAB, mannose-specific; The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. The enzyme II ManXYZ PTS system is involved in mannose transport. Also functions as a receptor for bacterial chemotaxis and is required for infection of the cell by bacteriophage lambda where it most likely functions as a pore for penetration of lambda DNA.


ensembl_gene_id: Z2861
symbol: manY
gene_biotype: protein_coding
description:
  PTS enzyme IIC, mannose-specific; The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. The enzyme II ManXYZ PTS system is involved in mannose transport. Also functions as a receptor for bacterial chemotaxis and is required for infection of the cell by bacteriophage lambda where it most likely functions as a pore for penetration of lambda DNA.


ensembl_gene_id: Z2862
symbol: manZ
gene_biotype: protein_coding
description:
  PTS enzyme IID, mannose-specific; The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. The enzyme II ManXYZ PTS system is involved in mannose transport. Also functions as a receptor for bacterial chemotaxis and is required for infection of the cell by bacteriophage lambda where it most likely functions as a pore for penetration of lambda DNA.


ensembl_gene_id: Z2863
symbol: yobD
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 152 of 152 are 99.34 pct identical to residues 1 to 152 of 152 from Escherichia coli K-12 Strain MG1655: B1820.


ensembl_gene_id: Z2864
symbol: mntP
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Probably functions as a manganese efflux pump. Belongs to the MntP (TC 9.B.29) family.


ensembl_gene_id: Z2866
symbol: yebH
gene_biotype: protein_coding
description:
  Putative enzyme; Residues 1 to 269 of 269 are 97.39 pct identical to residues 1 to 269 of 269 from Escherichia coli K-12 Strain MG1655: B1822.


ensembl_gene_id: Z2868
symbol: cspC
gene_biotype: protein_coding
description:
  Cold shock protein; Residues 1 to 69 of 69 are 100.00 pct identical to residues 1 to 69 of 69 from Escherichia coli K-12 Strain MG1655: B1823.


ensembl_gene_id: Z2869
symbol: yobF
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 47 of 47 are 100.00 pct identical to residues 1 to 47 of 47 from Escherichia coli K-12 Strain MG1655: B1824; Belongs to the YobF/DUF2527 family.


ensembl_gene_id: Z2871
symbol: yebO
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 95 of 95 are 98.94 pct identical to residues 1 to 95 of 95 from Escherichia coli K-12 Strain MG1655: B1825.


ensembl_gene_id: Z2872
symbol: mgrB
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; PhoP-regulated transcription is redox-sensitive, being activated when the periplasm becomes more reducing. MgrB acts between DsbA/DsbB and PhoP/PhoQ in this pathway. Represses PhoP/PhoQ signaling, possibly by binding to the periplasmic domain of PhoQ, altering its activity and that of downstream effector PhoP.


ensembl_gene_id: Z2874
symbol: kdgR
gene_biotype: protein_coding
description:
  Putative regulator; Residues 1 to 263 of 263 are 99.23 pct identical to residues 1 to 263 of 263 from Escherichia coli K-12 Strain MG1655: B1827.


ensembl_gene_id: Z2875
symbol: yebQ
gene_biotype: protein_coding
description:
  Putative transport protein; Residues 1 to 494 of 494 are 99.39 pct identical to residues 1 to 494 of 494 from Escherichia coli K-12 Strain MG1655: B1828.


ensembl_gene_id: Z2876
symbol: htpX
gene_biotype: protein_coding
description:
  Heat shock protein, integral membrane protein; Residues 1 to 293 of 293 are 99.31 pct identical to residues 1 to 293 of 293 from Escherichia coli K-12 Strain MG1655: B1829.


ensembl_gene_id: Z2877
symbol: prc
gene_biotype: protein_coding
description:
  Carboxy-terminal protease for penicillin-binding protein 3; Residues 1 to 682 of 682 are 99.85 pct identical to residues 1 to 682 of 682 from Escherichia coli K-12 Strain MG1655: B1830; Belongs to the peptidase S41A family.


ensembl_gene_id: Z2878
symbol: proQ
gene_biotype: protein_coding
description:
  ProQ protein that influences osmotic activation of ProP; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities. May regulate ProP activity through an RNA-based, post-transcriptional mechanism. Belongs to the ProQ family.


ensembl_gene_id: Z2879
symbol: msrC
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 183 of 183 are 98.36 pct identical to residues 1 to 183 of 183 from Escherichia coli K-12 Strain MG1655: B1832.


ensembl_gene_id: Z2881
symbol: yebT
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 879 of 879 are 99.65 pct identical to residues 1 to 879 of 879 from Escherichia coli K-12 Strain MG1655: B1834.


ensembl_gene_id: Z2882
symbol: yebU
gene_biotype: protein_coding
description:
  Putative nucleolar proteins; Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA.


ensembl_gene_id: Z2883
symbol: yebV
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 83 of 83 are 100.00 pct identical to residues 1 to 83 of 83 from Escherichia coli K-12 Strain MG1655: B1836.


ensembl_gene_id: Z2884
symbol: yebW
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 91 of 91 are 98.90 pct identical to residues 1 to 91 of 91 from Escherichia coli K-12 Strain MG1655: B1837.


ensembl_gene_id: Z2885
symbol: pphA
gene_biotype: protein_coding
description:
  Protein phosphatase 1 modulates phosphoproteins, signals protein misfolding; Residues 1 to 219 of 219 are 98.63 pct identical to residues 1 to 219 of 219 from Escherichia coli K-12 Strain MG1655: B1838.


ensembl_gene_id: Z2887
symbol: yebY
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 113 of 113 are 98.23 pct identical to residues 1 to 113 of 113 from Escherichia coli K-12 Strain MG1655: B1839.


ensembl_gene_id: Z2888
symbol: yebZ
gene_biotype: protein_coding
description:
  Putative resistance protein; Residues 1 to 290 of 290 are 98.62 pct identical to residues 1 to 290 of 290 from Escherichia coli K-12 Strain MG1655: B1840.


ensembl_gene_id: Z2889
symbol: yobA
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 124 of 124 are 99.19 pct identical to residues 1 to 124 of 124 from Escherichia coli K-12 Strain MG1655: B1841.


ensembl_gene_id: Z2891
symbol: holE
gene_biotype: protein_coding
description:
  DNA polymerase III theta subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity (By similarity).


ensembl_gene_id: Z2893
symbol: yobB
gene_biotype: protein_coding
description:
  Hypothetical protein; Residues 1 to 218 of 218 are 99.08 pct identical to residues 1 to 218 of 218 from Escherichia coli K-12 Strain MG1655: B1843.


ensembl_gene_id: Z2894
symbol: exoX
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 220 of 220 are 99.54 pct identical to residues 1 to 220 of 220 from Escherichia coli K-12 Strain MG1655: B1844.


ensembl_gene_id: Z2896
symbol: ptrB
gene_biotype: protein_coding
description:
  Protease II; Residues 1 to 686 of 686 are 98.97 pct identical to residues 1 to 686 of 686 from Escherichia coli K-12 Strain MG1655: B1845.


ensembl_gene_id: Z2897
symbol: yebE
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 219 of 219 are 97.26 pct identical to residues 1 to 219 of 219 from Escherichia coli K-12 Strain MG1655: B1846.


ensembl_gene_id: Z2899
symbol: yebF
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 122 of 122 are 99.18 pct identical to residues 1 to 122 of 122 from Escherichia coli K-12 Strain MG1655: B1847.


ensembl_gene_id: Z2900
symbol: yebG
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 96 of 96 are 100.00 pct identical to residues 1 to 96 of 96 from Escherichia coli K-12 Strain MG1655: B1848.


ensembl_gene_id: Z2901
symbol: purT
gene_biotype: protein_coding
description:
  Phosphoribosylglycinamide formyltransferase 2; Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate; Belongs to the PurK/PurT family.


ensembl_gene_id: Z2902
symbol: eda
gene_biotype: protein_coding
description:
  2-keto-3-deoxygluconate 6-phosphate aldolase and 2-keto-4-hydroxyglutarate aldolase; Residues 1 to 213 of 213 are 100.00 pct identical to residues 1 to 213 of 213 from Escherichia coli K-12 Strain MG1655: B1850.


ensembl_gene_id: Z2903
symbol: edd
gene_biotype: protein_coding
description:
  6-phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family.


ensembl_gene_id: Z2904
symbol: zwf
gene_biotype: protein_coding
description:
  Glucose-6-phosphate dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.


ensembl_gene_id: Z2905
symbol: yebK
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 289 of 289 are 99.65 pct identical to residues 1 to 289 of 289 from Escherichia coli K-12 Strain MG1655: B1853.


ensembl_gene_id: Z2906
symbol: pykA
gene_biotype: protein_coding
description:
  Pyruvate kinase II, glucose stimulated; Residues 1 to 480 of 480 are 99.58 pct identical to residues 1 to 480 of 480 from Escherichia coli K-12 Strain MG1655: B1854; Belongs to the pyruvate kinase family.


ensembl_gene_id: Z2907
symbol: msbB
gene_biotype: protein_coding
description:
  Suppressor of htrB, heat shock protein; Catalyzes the transfer of myristate from myristoyl-acyl carrier protein (ACP) to Kdo(2)-(lauroyl)-lipid IV(A) to form Kdo(2)- lipid A.


ensembl_gene_id: Z2908
symbol: yebA
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 419 of 419 are 100.00 pct identical to residues 1 to 419 of 419 from Escherichia coli K-12 Strain MG1655: B1856.


ensembl_gene_id: Z2909
symbol: yebL
gene_biotype: protein_coding
description:
  Putative adhesin; Residues 1 to 328 of 328 are 98.47 pct identical to residues 1 to 328 of 328 from Escherichia coli K-12 Strain MG1655: B1857; Belongs to the bacterial solute-binding protein 9 family.


ensembl_gene_id: Z2910
symbol: yebM
gene_biotype: protein_coding
description:
  Putative ATP-binding component of a transport system; Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Zinc importer (TC 3.A.1.15.5) family.


ensembl_gene_id: Z2911
symbol: yebI
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 261 of 261 are 98.85 pct identical to residues 1 to 261 of 261 from Escherichia coli K-12 Strain MG1655: B1859.


ensembl_gene_id: Z2912
symbol: ruvB
gene_biotype: protein_coding
description:
  Holliday junction helicase subunit A; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.


ensembl_gene_id: Z2913
symbol: ruvA
gene_biotype: protein_coding
description:
  Holliday junction helicase subunit B; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.


ensembl_gene_id: Z2914
symbol: yebB
gene_biotype: protein_coding
description:
  Hypothetical protein; Residues 1 to 233 of 233 are 98.71 pct identical to residues 1 to 233 of 233 from Escherichia coli K-12 Strain MG1655: B1862.


ensembl_gene_id: Z2915
symbol: ruvC
gene_biotype: protein_coding
description:
  Holliday junction nuclease; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group (By similarity).


ensembl_gene_id: Z2916
symbol: yebC
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 246 of 246 are 99.59 pct identical to residues 1 to 246 of 246 from Escherichia coli K-12 Strain MG1655: B1864.


ensembl_gene_id: Z2917
symbol: nudB
gene_biotype: protein_coding
description:
  dATP pyrophosphohydrolase; Catalyzes the hydrolysis of dihydroneopterin triphosphate to dihydroneopterin monophosphate and pyrophosphate. Required for efficient folate biosynthesis. Can also hydrolyze nucleoside triphosphates with a preference for dATP.


ensembl_gene_id: Z2919
symbol: aspS
gene_biotype: protein_coding
description:
  Aspartate tRNA synthetase; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor end of tRNA(Asp). Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.


ensembl_gene_id: Z2920
symbol: yecD
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 199 of 199 are 100.00 pct identical to residues 1 to 199 of 199 from Escherichia coli K-12 Strain MG1655: B1867; Belongs to the isochorismatase family.


ensembl_gene_id: Z2921
symbol: yecE
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 272 of 272 are 99.63 pct identical to residues 1 to 272 of 272 from Escherichia coli K-12 Strain MG1655: B1868; Belongs to the UPF0759 family.


ensembl_gene_id: Z2922
symbol: yecN
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 141 of 141 are 100.00 pct identical to residues 1 to 141 of 141 from Escherichia coli K-12 Strain MG1655: B1869.


ensembl_gene_id: Z2923
symbol: yecO
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Catalyzes the conversion of S-adenosyl-L-methionine (SAM) to carboxy-S-adenosyl-L-methionine (Cx-SAM).


ensembl_gene_id: Z2924
symbol: yecP
gene_biotype: protein_coding
description:
  Putative enzyme; Catalyzes carboxymethyl transfer from carboxy-S-adenosyl-L- methionine (Cx-SAM) to 5-hydroxyuridine (ho5U) to form 5- carboxymethoxyuridine (cmo5U) at position 34 in tRNAs.


ensembl_gene_id: Z2925
symbol: bisZ
gene_biotype: protein_coding
description:
  Biotin sulfoxide reductase 2; Reduces trimethylamine-N-oxide (TMAO) into trimethylamine; an anaerobic reaction coupled to energy-yielding reactions. Can also reduce other N- and S-oxide compounds such as 4-methylmorpholine-N- oxide and biotin sulfoxide (BSO), but with a lower catalytic efficiency (By similarity); Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: Z2926
symbol: yecK
gene_biotype: protein_coding
description:
  Putative cytochrome C-type protein; Part of the anaerobic respiratory chain of trimethylamine-N- oxide reductase TorZ. Required for electron transfer to the TorZ terminal enzyme (By similarity).


ensembl_gene_id: Z2928
symbol: yecM
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 190 of 190 are 98.94 pct identical to residues 1 to 190 of 190 from Escherichia coli K-12 Strain MG1655: B1875.


ensembl_gene_id: Z2929
symbol: argS
gene_biotype: protein_coding
description:
  Arginine tRNA synthetase; Residues 1 to 577 of 577 are 99.82 pct identical to residues 1 to 577 of 577 from Escherichia coli K-12 Strain MG1655: B1876.


ensembl_gene_id: Z2930
symbol: yecT
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 162 of 162 are 95.67 pct identical to residues 8 to 169 of 169 from Escherichia coli K-12 Strain MG1655: B1877.


ensembl_gene_id: Z2931
symbol: flhE
gene_biotype: protein_coding
description:
  Flagellar protein; Residues 1 to 130 of 130 are 97.69 pct identical to residues 1 to 130 of 130 from Escherichia coli K-12 Strain MG1655: B1878.


ensembl_gene_id: Z2932
symbol: flhA
gene_biotype: protein_coding
description:
  Flagellar biosynthesis; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.


ensembl_gene_id: Z2934
symbol: flhB
gene_biotype: protein_coding
description:
  Putative part of export apparatus for flagellar proteins; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family.


ensembl_gene_id: Z2935
symbol: cheZ
gene_biotype: protein_coding
description:
  Chemotactic response; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P).


ensembl_gene_id: Z2936
symbol: cheY
gene_biotype: protein_coding
description:
  Chemotaxis regulator transmits chemoreceptor signals to flagelllar motor components; Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors. In its active (phosphorylated or acetylated) form, CheY exhibits enhanced binding to a switch component, FliM, at the flagellar motor which induces a change from counterclockwise to clockwise flagellar rotation (By similarity).


ensembl_gene_id: Z2937
symbol: cheB
gene_biotype: protein_coding
description:
  Response regulator for chemotaxis (cheA sensor); Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.


ensembl_gene_id: Z2938
symbol: cheR
gene_biotype: protein_coding
description:
  Response regulator for chemotaxis; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP.


ensembl_gene_id: Z2939
symbol: tap
gene_biotype: protein_coding
description:
  Methyl-accepting chemotaxis protein IV, peptide sensor receptor; Residues 1 to 533 of 533 are 98.87 pct identical to residues 1 to 533 of 533 from Escherichia coli K-12 Strain MG1655: B1885.


ensembl_gene_id: Z2940
symbol: tar
gene_biotype: protein_coding
description:
  Methyl-accepting chemotaxis protein II, aspartate sensor receptor; Residues 1 to 553 of 553 are 99.63 pct identical to residues 1 to 553 of 553 from Escherichia coli K-12 Strain MG1655: B1886.


ensembl_gene_id: Z2941
symbol: cheW
gene_biotype: protein_coding
description:
  Positive regulator of CheA protein activity; Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors. It physically bridges CheA to the MCPs (methyl-accepting chemotaxis proteins) to allow regulated phosphotransfer to CheY and CheB (By similarity).


ensembl_gene_id: Z2942
symbol: cheA
gene_biotype: protein_coding
description:
  Sensory transducer kinase between chemo- signal receptors and CheB and CheY; Residues 1 to 654 of 654 are 99.38 pct identical to residues 1 to 654 of 654 from Escherichia coli K-12 Strain MG1655: B1888.


ensembl_gene_id: Z2943
symbol: motB
gene_biotype: protein_coding
description:
  Enables flagellar motor rotation, linking torque machinery to cell wall; MotA and MotB comprise the stator element of the flagellar motor complex. Required for the rotation of the flagellar motor. Might be a linker that fastens the torque-generating machinery to the cell wall (By similarity).


ensembl_gene_id: Z2944
symbol: motA
gene_biotype: protein_coding
description:
  Proton conductor component of motor; Residues 1 to 295 of 295 are 99.32 pct identical to residues 1 to 295 of 295 from Escherichia coli K-12 Strain MG1655: B1890.


ensembl_gene_id: Z2945
symbol: flhC
gene_biotype: protein_coding
description:
  Regulator of flagellar biosynthesis acting on class 2 operons; Functions in complex with FlhD as a master transcriptional regulator that regulates transcription of several flagellar and non- flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways; Belongs to the FlhC family.


ensembl_gene_id: Z2946
symbol: flhD
gene_biotype: protein_coding
description:
  Regulator of flagellar biosynthesis, acting on class 2 operons; Functions in complex with FlhC as a master transcriptional regulator that regulates transcription of several flagellar and non- flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways; Belongs to the FlhD family.


ensembl_gene_id: Z2948
symbol: yecG
gene_biotype: protein_coding
description:
  Hypothetical protein; Required for resistance to DNA-damaging agents. Belongs to the universal stress protein A family.


ensembl_gene_id: Z2949
symbol: otsA
gene_biotype: protein_coding
description:
  Trehalose-6-phosphate synthase; Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-alpha-D- glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose- 6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor; Belongs to the glycosyltransferase 20 family.


ensembl_gene_id: Z2950
symbol: otsB
gene_biotype: protein_coding
description:
  Trehalose-6-phosphate phophatase, biosynthetic; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.


ensembl_gene_id: Z2951
symbol: araH_B
gene_biotype: protein_coding
description:
  Partial high-affinity L-arabinose transport system; Residues 1 to 115 of 235 are 98.26 pct identical to residues 95 to 209 of 234 from Escherichia coli K-12 Strain MG1655: B1899.


ensembl_gene_id: Z2952
symbol: araH_A
gene_biotype: protein_coding
description:
  Partial high-affinity L-arabinose transport system; Residues 1 to 87 of 87 are 100.00 pct identical to residues 1 to 87 of 234 from Escherichia coli K-12 Strain MG1655: B1899.


ensembl_gene_id: Z2953
symbol: araG
gene_biotype: protein_coding
description:
  ATP-binding component of high-affinity L-arabinose transport system; Part of the ABC transporter complex AraFGH involved in arabinose import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Arabinose importer (TC 3.A.1.2.2) family.


ensembl_gene_id: Z2954
symbol: araF
gene_biotype: protein_coding
description:
  L-arabinose-binding periplasmic protein; Residues 1 to 329 of 329 are 98.78 pct identical to residues 1 to 329 of 329 from Escherichia coli K-12 Strain MG1655: B1901.


ensembl_gene_id: Z2956
symbol: yecI
gene_biotype: protein_coding
description:
  Ferritin-like protein; Residues 1 to 167 of 167 are 100.00 pct identical to residues 1 to 167 of 167 from Escherichia coli K-12 Strain MG1655: B1902.


ensembl_gene_id: Z2958
symbol: Z2958
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 90 of 90 are 94.44 pct identical to residues 23 to 112 of 112 from Escherichia coli K-12 Strain MG1655: B1903.


ensembl_gene_id: Z2959
symbol: yecR
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 107 of 107 are 98.13 pct identical to residues 1 to 107 of 107 from Escherichia coli K-12 Strain MG1655: B1904.


ensembl_gene_id: Z2960
symbol: ftn
gene_biotype: protein_coding
description:
  Cytoplasmic ferritin (an iron storage protein); Iron-storage protein; Belongs to the ferritin family. Prokaryotic subfamily.


ensembl_gene_id: Z2962
symbol: yecH
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 79 of 79 are 97.46 pct identical to residues 1 to 79 of 79 from Escherichia coli K-12 Strain MG1655: B1906.


ensembl_gene_id: Z2963
symbol: tyrP
gene_biotype: protein_coding
description:
  Tyrosine-specific transport system; Residues 1 to 403 of 403 are 99.75 pct identical to residues 1 to 403 of 403 from Escherichia coli K-12 Strain MG1655: B1907.


ensembl_gene_id: Z2964
symbol: yecA
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 221 of 221 are 99.54 pct identical to residues 1 to 221 of 221 from Escherichia coli K-12 Strain MG1655: B1908; Belongs to the UPF0149 family.


ensembl_gene_id: Z2966
symbol: intT
gene_biotype: protein_coding
description:
  Integrase for prophage CP-933T; Residues 1 to 331 of 333 are 57.86 pct identical to residues 1 to 334 of 337 from GenPept 118 : gi|1679807|emb|CAA96221.1| (Z71579) integrase [Bacteriophage S2].


ensembl_gene_id: Z2969
symbol: Z2969
gene_biotype: protein_coding
description:
  Unknown protein encoded by prophage CP-933T; Residues 6 to 107 of 134 are 32.40 pct identical to residues 8 to 115 of 123 from GenPept 118 : gi|7226247|gb|AAF41408.1| (AE002452) transcriptional regulator [Neisseria meningitidis MC58].


ensembl_gene_id: Z2970
symbol: coxT
gene_biotype: protein_coding
description:
  Putative regulator for prophage CP-933T; Residues 4 to 59 of 67 are 46.42 pct identical to residues 2 to 57 of 70 from GenPept 118 : gi|4530499|gb|AAD22064.1| (AF125163) Cox [Bacteriophage K139].


ensembl_gene_id: Z2978
symbol: Z2978
gene_biotype: protein_coding
description:
  Putative replication protein for prophage CP-933T; Residues 173 to 739 of 940 are 34.27 pct identical to residues 133 to 649 of 694 from GenPept 118 : gi|3337286|gb|AAC34186.1| (U32222) A protein [Bacteriophage 186].


ensembl_gene_id: Z2979
symbol: stbA
gene_biotype: protein_coding
description:
  Putative stability/partitioning protein encoded within prophage CP-933T; Residues 1 to 316 of 319 are 51.09 pct identical to residues 1 to 319 of 326 from GenPept 118 : gi|4512462|dbj|BAA75111.1| (AB021078) 51 pct identical to sp:STBA_ECOLI[StbA of plasmid NRI]; stable inheritance protein [Plasmid ColIb-P9].


ensembl_gene_id: Z2980
symbol: Z2980
gene_biotype: protein_coding
description:
  Putative stability/partitioning protein encoded within CP-933T; Residues 1 to 62 of 104 are 40.32 pct identical to residues 1 to 62 of 152 from GenPept 118 : gi|208645|gb|AAA99913.1| (L05669) one base was omitted in the sequence of ref.3 resulting in a shorter reading frame, but was corrected in Genbank accessno. X0.


ensembl_gene_id: Z2981
symbol: Z2981
gene_biotype: protein_coding
description:
  IS629 transposase encoded within prophage CP-933T; Residues 1 to 226 of 229 are 99.11 pct identical to residues 1 to 226 of 295 from GenPept 118 : gi|3822133|gb|AAC70087.1| (AF074613) transposase [Escherichia coli O157:H7].


ensembl_gene_id: Z2982
symbol: Z2982
gene_biotype: protein_coding
description:
  Unknown protein of IS629 encoded within prophage CP-933T; Residues 1 to 108 of 108 are 99.07 pct identical to residues 1 to 108 of 108 from GenPept 118 : gi|6453799|gb|AAF09023.1| (AF139596) unknown [Shigella flexneri].


ensembl_gene_id: Z2983
symbol: tfaQ
gene_biotype: protein_coding
description:
  Putative tail fiber assembly protein of prophage CP-933T; Residues 1 to 137 of 138 are 86.86 pct identical to residues 108 to 244 of 247 from GenPept 118 : gi|1786774|gb|AAC73662.1| (AE000161) orf, hypothetical protein [Escherichia coli].


ensembl_gene_id: Z2984
symbol: Z2984
gene_biotype: protein_coding
description:
  Putative serine acetlyltransferase of prophage CP-933T; Residues 13 to 201 of 201 are 50.26 pct identical to residues 7 to 195 of 197 from GenPept 118 : gi|6009396|dbj|BAA84855.1| (AB024946) orf20 [Escherichia coli].


ensembl_gene_id: Z2985
symbol: Z2985
gene_biotype: protein_coding
description:
  Putative tail fiber protein of prophage CP-933T; Residues 3 to 153 of 164 are 43.58 pct identical to residues 1 to 156 of 161 from GenPept 118 : gi|3337273|gb|AAC34171.1| (U32222) F protein [Bacteriophage 186].


ensembl_gene_id: Z2986
symbol: Z2986
gene_biotype: protein_coding
description:
  Putative tail fiber protein of prophage CP-933T; Residues 2 to 66 of 278 are 38.46 pct identical to residues 659 to 723 of 815 from GenPept 118 : gi|3139112|gb|AAD03293.1| (AF063097) gpT [Bacteriophage P2].


ensembl_gene_id: Z2987
symbol: Z2987
gene_biotype: protein_coding
description:
  Putative tail fiber component of prophage CP-933T; Residues 6 to 651 of 696 are 32.32 pct identical to residues 7 to 652 of 815 from GenPept 118 : gi|3139112|gb|AAD03293.1| (AF063097) gpT [Bacteriophage P2].


ensembl_gene_id: Z2988
symbol: Z2988
gene_biotype: protein_coding
description:
  Putative tail fiber protein component of prophage CP-933T; Residues 6 to 47 of 51 are 47.61 pct identical to residues 100 to 141 of 142 from GenPept 118 : gi|3139111|gb|AAD03292.1| (AF063097) gpE+E' [Bacteriophage P2].


ensembl_gene_id: Z2989
symbol: Z2989
gene_biotype: protein_coding
description:
  Unknown protein encoded by prophage CP-933T; Residues 22 to 106 of 121 are 32.94 pct identical to residues 6 to 88 of 100 from GenPept 118 : gi|5852855|gb|AAD54240.1| (AF153829) unknown [Salmonella typhi].


ensembl_gene_id: Z2990
symbol: Z2990
gene_biotype: protein_coding
description:
  Putative tail fiber component of prophage CP-933T; Residues 1 to 169 of 170 are 47.09 pct identical to residues 1 to 171 of 171 from GenPept 118 : gi|5852852|gb|AAD54237.1|AF153829_3 (AF153829) unknown [Salmonella typhi].


ensembl_gene_id: Z2991
symbol: Z2991
gene_biotype: protein_coding
description:
  Putative tail sheath protein of prophage CP-933T; Residues 7 to 383 of 394 are 47.88 pct identical to residues 8 to 381 of 391 from GenPept 118 : gi|4063795|dbj|BAA36249.1| (AB008550) orf22; similar to F1 gene of P2 [Pseudomonas aeruginosa phage phi CTX].


ensembl_gene_id: Z2992
symbol: Z2992
gene_biotype: protein_coding
description:
  Putative tail assembly protein of prophage CP-933T; Residues 29 to 98 of 117 are 59.15 pct identical to residues 15 to 85 of 387 from GenPept 118 : gi|3139114|gb|AAD03295.1| (AF063097) gpD [Bacteriophage P2].


ensembl_gene_id: Z2993
symbol: tra8_2
gene_biotype: protein_coding
description:
  IS30 transposase encoded within prophage CP-933T; Residues 29 to 396 of 396 are 99.72 pct identical to residues 15 to 383 of 383 from GenPept 118 : gi|7800288|gb|AAF69884.1|AF250878_45 (AF250878) IS30 transposase [Salmonella typhi].


ensembl_gene_id: Z3000
symbol: pgsA
gene_biotype: protein_coding
description:
  CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; This protein catalyzes the committed step to the synthesis of the acidic phospholipids; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: Z3001
symbol: uvrC
gene_biotype: protein_coding
description:
  Excinuclease ABC, subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision (By similarity).


ensembl_gene_id: Z3002
symbol: uvrY
gene_biotype: protein_coding
description:
  Putative 2-component transcriptional regulator; Member of the two-component regulatory system UvrY/BarA involved in the regulation of carbon metabolism via the CsrA/CsrB regulatory system. UvrY activates the transcription of the untranslated csrB RNA and of barA, in an autoregulatory loop. Mediates the effects of CsrA on csrB RNA by BarA-dependent and BarA-independent mechanisms (By similarity).


ensembl_gene_id: Z3003
symbol: yecF
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 74 of 74 are 98.64 pct identical to residues 1 to 74 of 74 from Escherichia coli K-12 Strain MG1655: B1915.


ensembl_gene_id: Z3004
symbol: sdiA
gene_biotype: protein_coding
description:
  Transcriptional regulator of ftsQAZ gene cluster; Residues 1 to 240 of 240 are 99.16 pct identical to residues 1 to 240 of 240 from Escherichia coli K-12 Strain MG1655: B1916.


ensembl_gene_id: Z3005
symbol: yecC
gene_biotype: protein_coding
description:
  Putative ATP-binding component of a transport system; Residues 1 to 250 of 250 are 99.59 pct identical to residues 1 to 250 of 250 from Escherichia coli K-12 Strain MG1655: B1917.


ensembl_gene_id: Z3006
symbol: yecS
gene_biotype: protein_coding
description:
  Putative transport system permease protein (former yecC); Residues 1 to 222 of 222 are 99.54 pct identical to residues 1 to 222 of 222 from Escherichia coli K-12 Strain MG1655: B1918.


ensembl_gene_id: Z3008
symbol: yedO
gene_biotype: protein_coding
description:
  Putative 1-aminocyclopropane-1-carboxylate deaminase; Catalyzes the alpha,beta-elimination reaction of D-cysteine and of several D-cysteine derivatives. It could be a defense mechanism against D-cysteine; Belongs to the ACC deaminase/D-cysteine desulfhydrase family.


ensembl_gene_id: Z3010
symbol: fliY
gene_biotype: protein_coding
description:
  Putative periplasmic binding transport protein; Residues 1 to 266 of 266 are 99.62 pct identical to residues 1 to 266 of 266 from Escherichia coli K-12 Strain MG1655: B1920; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: Z3011
symbol: fliZ
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 195 of 195 are 98.97 pct identical to residues 1 to 195 of 195 from Escherichia coli K-12 Strain MG1655: B1921.


ensembl_gene_id: Z3012
symbol: fliA
gene_biotype: protein_coding
description:
  Flagellar biosynthesis; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes; Belongs to the sigma-70 factor family. FliA subfamily.


ensembl_gene_id: Z3013
symbol: fliC
gene_biotype: protein_coding
description:
  Flagellar biosynthesis; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.


ensembl_gene_id: Z3014
symbol: fliD
gene_biotype: protein_coding
description:
  Flagellar biosynthesis; Required for the morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end (By similarity).


ensembl_gene_id: Z3015
symbol: fliS
gene_biotype: protein_coding
description:
  Flagellar biosynthesis; Residues 1 to 136 of 136 are 97.79 pct identical to residues 1 to 136 of 136 from Escherichia coli K-12 Strain MG1655: B1925.


ensembl_gene_id: Z3016
symbol: fliT
gene_biotype: protein_coding
description:
  Flagellar biosynthesis; Dual-function protein that regulates the transcription of class 2 flagellar operons and that also acts as an export chaperone for the filament-capping protein FliD. As a transcriptional regulator, acts as an anti-FlhDC factor; it directly binds FlhC, thus inhibiting the binding of the FlhC/FlhD complex to class 2 promoters, resulting in decreased expression of class 2 flagellar operons. As a chaperone, effects FliD transition to the membrane by preventing its premature polymerization, and by directing it to the export apparatus.


ensembl_gene_id: Z3017
symbol: amyA
gene_biotype: protein_coding
description:
  Cytoplasmic alpha-amylase; Residues 1 to 495 of 495 are 98.18 pct identical to residues 1 to 495 of 495 from Escherichia coli K-12 Strain MG1655: B1927.


ensembl_gene_id: Z3018
symbol: yedD
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 137 of 137 are 99.27 pct identical to residues 1 to 137 of 137 from Escherichia coli K-12 Strain MG1655: B1928.


ensembl_gene_id: Z3019
symbol: yedE
gene_biotype: protein_coding
description:
  Putative transport system permease protein; Residues 1 to 401 of 401 are 99.75 pct identical to residues 1 to 401 of 401 from Escherichia coli K-12 Strain MG1655: B1929.


ensembl_gene_id: Z3020
symbol: yedF
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 77 of 77 are 100.00 pct identical to residues 1 to 77 of 77 from Escherichia coli K-12 Strain MG1655: B1930; Belongs to the sulfur carrier protein TusA family.


ensembl_gene_id: Z3021
symbol: yedK
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 214 of 222 are 98.13 pct identical to residues 1 to 214 of 217 from Escherichia coli K-12 Strain MG1655: B1931; Belongs to the SOS response-associated peptidase family.


ensembl_gene_id: Z3022
symbol: yedL
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 158 of 159 are 97.46 pct identical to residues 1 to 158 of 159 from Escherichia coli K-12 Strain MG1655: B1932.


ensembl_gene_id: Z3023
symbol: espR3
gene_biotype: protein_coding
description:
  Putative secreted protein; Residues 1 to 104 of 379 are 77.88 pct identical to residues 1 to 104 of 116 from Escherichia coli K-12 Strain MG1655: B1935.


ensembl_gene_id: Z3024
symbol: intG
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 92 of 92 are 88.04 pct identical to residues 1 to 92 of 92 from Escherichia coli K-12 Strain MG1655: B1936; Belongs to the 'phage' integrase family.


ensembl_gene_id: Z3025
symbol: Z3025
gene_biotype: protein_coding
description:
  Hypothetical protein; Residues 1 to 99 of 99 are 93.93 pct identical to residues 61 to 159 of 159 from GenPept 118 : gi|1788242|gb|AAC74999.1| (AE000286) orf, hypothetical protein [Escherichia coli].


ensembl_gene_id: Z3026
symbol: espR4
gene_biotype: protein_coding
description:
  Putative secreted protein; Residues 1 to 104 of 379 are 76.92 pct identical to residues 1 to 104 of 116 from GenPept 118 : gi|1788245|gb|AAC75002.1| (AE000286) orf, hypothetical protein [Escherichia coli].


ensembl_gene_id: Z3027
symbol: fliE
gene_biotype: protein_coding
description:
  Flagellar biosynthesis; Residues 1 to 104 of 104 are 100.00 pct identical to residues 1 to 104 of 104 from Escherichia coli K-12 Strain MG1655: B1937.


ensembl_gene_id: Z3028
symbol: fliF
gene_biotype: protein_coding
description:
  Flagellar biosynthesis; The M ring may be actively involved in energy transduction. Belongs to the FliF family.


ensembl_gene_id: Z3029
symbol: fliG
gene_biotype: protein_coding
description:
  Flagellar motor switch protein FliG; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation (By similarity).


ensembl_gene_id: Z3030
symbol: fliH
gene_biotype: protein_coding
description:
  Flagellar biosynthesis; Residues 1 to 235 of 235 are 99.14 pct identical to residues 1 to 235 of 235 from Escherichia coli K-12 Strain MG1655: B1940.


ensembl_gene_id: Z3031
symbol: fliI
gene_biotype: protein_coding
description:
  Flagellum-specific ATP synthase; Residues 40 to 496 of 496 are 100.00 pct identical to residues 1 to 457 of 457 from Escherichia coli K-12 Strain MG1655: B1941.


ensembl_gene_id: Z3032
symbol: fliJ
gene_biotype: protein_coding
description:
  Flagellar fliJ protein; Flagellar protein that affects chemotactic events. Belongs to the FliJ family.


ensembl_gene_id: Z3033
symbol: fliK
gene_biotype: protein_coding
description:
  Flagellar hook-length control protein; Residues 1 to 375 of 375 are 98.40 pct identical to residues 1 to 375 of 375 from Escherichia coli K-12 Strain MG1655: B1943.


ensembl_gene_id: Z3034
symbol: fliL
gene_biotype: protein_coding
description:
  Flagellar biosynthesis; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.


ensembl_gene_id: Z3035
symbol: fliM
gene_biotype: protein_coding
description:
  Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.


ensembl_gene_id: Z3036
symbol: fliN
gene_biotype: protein_coding
description:
  Flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.


ensembl_gene_id: Z3037
symbol: fliO
gene_biotype: protein_coding
description:
  Flagelar biosynthesis; Residues 1 to 101 of 101 are 100.00 pct identical to residues 1 to 101 of 101 from Escherichia coli K-12 Strain MG1655: B1947.


ensembl_gene_id: Z3038
symbol: fliP
gene_biotype: protein_coding
description:
  Flagellar biosynthesis; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.


ensembl_gene_id: Z3039
symbol: fliQ
gene_biotype: protein_coding
description:
  Flagellar biosynthesis; Required for the assembly of the rivet at the earliest stage of flagellar biosynthesis; Belongs to the FliQ/MopD/SpaQ family.


ensembl_gene_id: Z3041
symbol: rcsA
gene_biotype: protein_coding
description:
  Positive regulator for ctr capsule biosynthesis, positive transcription factor; Component of the Rcs signaling system, which controls transcription of numerous genes. Binds, with RcsB, to the RcsAB box to regulate expression of genes.


ensembl_gene_id: Z3042
symbol: dsrB
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 62 of 62 are 100.00 pct identical to residues 1 to 62 of 62 from Escherichia coli K-12 Strain MG1655: B1952; Belongs to the DsrB family.


ensembl_gene_id: Z3043
symbol: yodD
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 80 of 80 are 100.00 pct identical to residues 1 to 80 of 80 from Escherichia coli K-12 Strain MG1655: B1953.


ensembl_gene_id: Z3045
symbol: yedP
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 271 of 271 are 98.89 pct identical to residues 1 to 271 of 271 from Escherichia coli K-12 Strain MG1655: B1955.


ensembl_gene_id: Z3047
symbol: dgcQ
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Catalyzes the synthesis of cyclic-di-GMP (c-di-GMP) via the condensation of 2 GTP molecules (By similarity). Cyclic-di-GMP is a second messenger which controls cell surface-associated traits in bacteria. Involved in the regulation of cellulose production (By similarity).


ensembl_gene_id: Z3048
symbol: yodC
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 60 of 60 are 100.00 pct identical to residues 1 to 60 of 60 from Escherichia coli K-12 Strain MG1655: B1957.


ensembl_gene_id: Z3049
symbol: yedI
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 305 of 305 are 98.68 pct identical to residues 1 to 305 of 305 from Escherichia coli K-12 Strain MG1655: B1958.


ensembl_gene_id: Z3050
symbol: yedA
gene_biotype: protein_coding
description:
  Putative transmembrane subunit; Residues 1 to 306 of 306 are 100.00 pct identical to residues 1 to 306 of 306 from Escherichia coli K-12 Strain MG1655: B1959.


ensembl_gene_id: Z3053
symbol: vsr
gene_biotype: protein_coding
description:
  DNA mismatch endonuclease, patch repair protein; May nick specific sequences that contain T:G mispairs resulting from m5C-deamination.


ensembl_gene_id: Z3054
symbol: dcm
gene_biotype: protein_coding
description:
  DNA cytosine methylase; This methylase recognizes the double-stranded sequence CCWGG, causes specific methylation on C-2 on both strands; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.


ensembl_gene_id: Z3055
symbol: yedJ
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 231 of 231 are 96.96 pct identical to residues 1 to 231 of 231 from Escherichia coli K-12 Strain MG1655: B1962.


ensembl_gene_id: Z3056
symbol: Z3056
gene_biotype: protein_coding
description:
  Hypothetical protein; Residues 1 to 88 of 102 are 97.72 pct identical to residues 7 to 94 of 127 from Escherichia coli K-12 Strain MG1655: B1963.


ensembl_gene_id: Z3057
symbol: Z3057
gene_biotype: protein_coding
description:
  Putative outer membrane protein; Residues 1 to 171 of 224 are 96.49 pct identical to residues 1 to 171 of 171 from Escherichia coli K-12 Strain MG1655: B1964.


ensembl_gene_id: Z3058
symbol: Z3058
gene_biotype: protein_coding
description:
  Putative outer membrane protein; Residues 1 to 191 of 191 are 61.73 pct identical to residues 202 to 377 of 377 from Escherichia coli K-12 Strain MG1655: B1377.


ensembl_gene_id: Z3059
symbol: yedU
gene_biotype: protein_coding
description:
  Hypothetical protein; Protein and nucleotide deglycase that catalyzes the deglycation of the Maillard adducts formed between amino groups of proteins or nucleotides and reactive carbonyl groups of glyoxals. Thus, functions as a protein deglycase that repairs methylglyoxal- and glyoxal-glycated proteins, and releases repaired proteins and lactate or glycolate, respectively. Deglycates cysteine, arginine and lysine residues in proteins, and thus reactivates these proteins by reversing glycation by glyoxals. Acts on early glycation intermediates (hemithioacetals and aminocarbinols), preve [...]


ensembl_gene_id: Z3061
symbol: yedW
gene_biotype: protein_coding
description:
  Putative 2-component transcriptional regulator; Residues 1 to 239 of 239 are 99.16 pct identical to residues 1 to 239 of 239 from Escherichia coli K-12 Strain MG1655: B1969.


ensembl_gene_id: Z3062
symbol: hiuH
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Catalyzes the hydrolysis of 5-hydroxyisourate (HIU) to 2-oxo- 4-hydroxy-4-carboxy-5-ureidoimidazoline (OHCU).


ensembl_gene_id: Z3063
symbol: msrP
gene_biotype: protein_coding
description:
  Putative reductase; Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation, including the primary periplasmic chaperone SurA and the lipoprotein Pal. The catalytic su [...]


ensembl_gene_id: Z3064
symbol: msrQ
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation, including the primary periplasmic chaperone SurA and the lipoprotein Pal. MsrQ prov [...]


ensembl_gene_id: Z3065
symbol: zinT
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 216 of 216 are 99.07 pct identical to residues 1 to 216 of 216 from Escherichia coli K-12 Strain MG1655: B1973.


ensembl_gene_id: Z3067
symbol: yodB
gene_biotype: protein_coding
description:
  Putative cytochrome; Residues 1 to 186 of 186 are 99.46 pct identical to residues 1 to 186 of 186 from Escherichia coli K-12 Strain MG1655: B1974.


ensembl_gene_id: Z3072
symbol: espF(U)
gene_biotype: protein_coding
description:
  Unknown protein encoded within prophage CP-933U; Required for efficient pedestal formation in host epithelial cells during infection. Acts as an intermediate between Tir (via host BAIAP2) and host WASL/N-WASP. Directly binds and activates WASL/N-WASP, which stimulates actin polymerization and leads to the formation of actin pedestals at the sites of bacterial adhesion (By similarity).


ensembl_gene_id: Z3073
symbol: Z3073
gene_biotype: protein_coding
description:
  Unknown protein encoded within prophage CP-933U; Residues 1 to 89 of 89 are 88.76 pct identical to residues 41 to 129 of 129 from GenPept 118 : gi|4585437|gb|AAD25465.1|AF125520_60 (AF125520) hypothetical protein [Bacteriophage 933W].


ensembl_gene_id: Z3074
symbol: Z3074
gene_biotype: protein_coding
description:
  Putative tail fiber protein of prophage CP-933U; Residues 123 to 439 of 439 are 63.63 pct identical to residues 330 to 645 of 645 from GenPept 118 : gi|4585436|gb|AAD25464.1|AF125520_59 (AF125520) putative tail fiber protein [Bacteriophage 933W].


ensembl_gene_id: Z3075
symbol: lomU
gene_biotype: protein_coding
description:
  Putative outer membrane protein of prophage CP-933U; Residues 1 to 199 of 199 are 68.34 pct identical to residues 1 to 199 of 199 from GenPept 118 : gi|7532789|gb|AAF63231.1|AF151091_2 (AF151091) Lom [prophage P-EibA].


ensembl_gene_id: Z3077
symbol: Z3077
gene_biotype: protein_coding
description:
  Putative tail fiber component J of prophage CP-933U; Residues 1to 1158 of 1159 are 65.12 pct identical to residues 1to 1131 of 1132 from GenPept 118 : gi|215125|gb|AAA96553.1| (J02459) J (tail:host specificity;1132) [bacteriophage lambda].


ensembl_gene_id: Z3079
symbol: Z3079
gene_biotype: protein_coding
description:
  Putative tail fiber component I of prophage CP-933U; Residues 1 to 177 of 178 are 68.53 pct identical to residues 48 to 223 of 223 from GenPept 118 : gi|215124|gb|AAA96552.1| (J02459) I (tail component;223) [bacteriophage lambda].


ensembl_gene_id: Z3081
symbol: Z3081
gene_biotype: protein_coding
description:
  Putative tail fiber component K of prophage CP-933U; Residues 95 to 290 of 293 are 86.22 pct identical to residues 1 to 196 of 199 from GenPept 118 : gi|215123|gb|AAA96551.1| (J02459) K (tail component;199) [bacteriophage lambda].


ensembl_gene_id: Z3082
symbol: Z3082
gene_biotype: protein_coding
description:
  Putative tail fiber component L of prophage CP-933U; Residues 1 to 232 of 232 are 76.29 pct identical to residues 1 to 232 of 232 from GenPept 118 : gi|215122|gb|AAA96550.1| (J02459) L (tail component;232) [bacteriophage lambda].


ensembl_gene_id: Z3083
symbol: Z3083
gene_biotype: protein_coding
description:
  Putative tail fiber component M of prophage CP-933U; Residues 1 to 109 of 109 are 79.81 pct identical to residues 1 to 109 of 109 from GenPept 118 : gi|215121|gb|AAA96549.1| (J02459) M (tail component;109) [bacteriophage lambda].


ensembl_gene_id: Z3084
symbol: Z3084
gene_biotype: protein_coding
description:
  Putative tail fiber component H of prophage CP-933U; Residues 4 to 884 of 884 are 49.40 pct identical to residues 1 to 853 of 853 from GenPept 118 : gi|215120|gb|AAA96548.1| (J02459) H (tail component;853) [bacteriophage lambda].


ensembl_gene_id: Z3085
symbol: Z3085
gene_biotype: protein_coding
description:
  Putative tail fiber component T of prophage CP-933U; Residues 1 to 102 of 102 are 70.58 pct identical to residues 16 to 113 of 144 from GenPept 118 : gi|215119|gb|AAA96547.1| (J02459) T (tail component;144) [bacteriophage lambda].


ensembl_gene_id: Z3086
symbol: Z3086
gene_biotype: protein_coding
description:
  Putative tail fiber component G of prophage CP-933U; Residues 1 to 140 of 140 are 43.26 pct identical to residues 1 to 140 of 140 from GenPept 118 : gi|215118|gb|AAA96546.1| (J02459) G (tail component;140) [bacteriophage lambda].


ensembl_gene_id: Z3087
symbol: Z3087
gene_biotype: protein_coding
description:
  Putative tail fiber component V of prophage CP-933U; Residues 1 to 244 of 250 are 79.50 pct identical to residues 1 to 244 of 246 from GenPept 118 : gi|215117|gb|AAA96545.1| (J02459) V (tail component;256) [bacteriophage lambda].


ensembl_gene_id: Z3088
symbol: Z3088
gene_biotype: protein_coding
description:
  Putative tail fiber component U of prophage CP-933U; Residues 1 to 132 of 132 are 53.78 pct identical to residues 1 to 132 of 132 from GenPept 118 : gi|3192696|gb|AAC19049.1| (AF064539) gp12 [Bacteriophage N15].


ensembl_gene_id: Z3089
symbol: Z3089
gene_biotype: protein_coding
description:
  Putative tail fiber component Z of prophage CP-933U; Residues 3 to 208 of 209 are 52.42 pct identical to residues 1 to 192 of 192 from GenPept 118 : gi|215115|gb|AAA96543.1| (J02459) Z (tail component;192) [bacteriophage lambda].


ensembl_gene_id: Z3093
symbol: Z3093
gene_biotype: protein_coding
description:
  Unknown in IS629 encoded within prophage CP-933U; Residues 1 to 108 of 108 are 100.00 pct identical to residues 1 to 108 of 108 from GenPept 118 : gi|3822180|gb|AAC70134.1| (AF074613) hypothetical protein [Escherichia coli O157:H7].


ensembl_gene_id: Z3095
symbol: Z3095
gene_biotype: protein_coding
description:
  Putative transposase encoded within prophage CP-933U; Residues 30 to 288 of 288 are 100.00 pct identical to residues 38 to 296 of 296 from GenPept 118 : gi|3822179|gb|AAC70133.1| (AF074613) transposase [Escherichia coli O157:H7].


ensembl_gene_id: Z3097
symbol: Z3097
gene_biotype: protein_coding
description:
  Putative peptidase encoded within prophage CP-933U; Residues 12 to 206 of 319 are 39.50 pct identical to residues 24 to 222 of 296 from GenPept 118 : gi|5059251|gb|AAD38956.1| (AF147978) putative ClpP protease [Bacteriophage D3].


ensembl_gene_id: Z3098
symbol: Z3098
gene_biotype: protein_coding
description:
  Putative head-tail preconnector protein of prophage CP-933U; Residues 46 to 483 of 500 are 24.38 pct identical to residues 38 to 469 of 472 from GenPept 118 : gi|6723246|dbj|BAA89642.1| (AB036666) similar to portal protein GPB of phage lambda [Wolbachia sp. wKue].


ensembl_gene_id: Z3099
symbol: Z3099
gene_biotype: protein_coding
description:
  Putative DNA packaging protein of prophage CP-933U; Residues 4 to 614 of 670 are 24.92 pct identical to residues 31 to 583 of 609 from GenPept 118 : gi|6723244|dbj|BAA89640.1| (AB036666) similar to terminase large subunit of phage lambda [Wolbachia sp. wKue].


ensembl_gene_id: Z3101
symbol: Z3101
gene_biotype: protein_coding
description:
  Putative endopeptidase of prophage CP-933U; Residues 1 to 155 of 155 are 100.00 pct identical to residues 1 to 155 of 155 from GenPept 118 : gi|5881639|dbj|BAA84330.1| (AP000363) Rz [Bacteriophage VT2-Sa].


ensembl_gene_id: Z3104
symbol: Z3104
gene_biotype: protein_coding
description:
  Putative endolysin of prophage CP-933U; Residues 1 to 177 of 177 are 97.17 pct identical to residues 1 to 177 of 177 from GenPept 118 : gi|4585422|gb|AAD25450.1|AF125520_45 (AF125520) endolysin [Bacteriophage 933W].


ensembl_gene_id: Z3105
symbol: Z3105
gene_biotype: protein_coding
description:
  Unknown protein encoded within prophage CP-933U; Residues 2 to 75 of 115 are 43.24 pct identical to residues 1 to 74 of 103 from GenPept 118 : gi|1787837|gb|AAC74628.1| (AE000252) orf, hypothetical protein [Escherichia coli].


ensembl_gene_id: Z3106
symbol: Z3106
gene_biotype: protein_coding
description:
  Putative holin protein of prophage CP-933U; Residues 13 to 104 of 104 are 90.21 pct identical to residues 5 to 96 of 96 from GenPept 118 : gi|5881636|dbj|BAA84327.1| (AP000363) S [Bacteriophage VT2-Sa].


ensembl_gene_id: Z3107
symbol: Z3107
gene_biotype: protein_coding
description:
  Unknown protein encoded within prophage CP-933U; Residues 1 to 613 of 617 are 53.40 pct identical to residues 1 to 640 of 645 from GenPept 118 : gi|4585419|gb|AAD25447.1|AF125520_42 (AF125520) hypothetical protein [Bacteriophage 933W].


ensembl_gene_id: Z3109
symbol: Z3109
gene_biotype: protein_coding
description:
  Unknown protein encoded within prophage CP-933U; Residues 14 to 133 of 139 are 26.44 pct identical to residues 24 to 143 of 150 from GenPept 118 : gi|6460016|gb|AAF11761.1|AE002054_6 (AE002054) tellurium resistance protein TerB (terB) putative [Deinococcus radiodurans].


ensembl_gene_id: Z3114
symbol: Z3114
gene_biotype: protein_coding
description:
  Putative antiterminator Q homolog of prophage CP-933U; Residues 1 to 229 of 229 are 75.54 pct identical to residues 1 to 229 of 229 from GenPept 118 : gi|215365|gb|AAA32298.1| (J02803) Q protein [Bacteriophage 82].


ensembl_gene_id: Z3115
symbol: Z3115
gene_biotype: protein_coding
description:
  Putative endonuclease encoded within prophage CP-933U; Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC; Belongs to the rusA family.


ensembl_gene_id: Z3116
symbol: Z3116
gene_biotype: protein_coding
description:
  Unknown protein encoded within prophage CP-933U; ; similar to [SwissProt Accession Number Q06262] [Escherichia coli].


ensembl_gene_id: Z3119
symbol: Z3119
gene_biotype: protein_coding
description:
  Unknown protein encoded within prophage CP-933U; Residues 37 to 97 of 187 are 73.77 pct identical to residues 30 to 90 of 101 from GenPept 118 : gi|1788705|gb|AAC75422.1| (AE000324) orf, hypothetical protein [Escherichia coli].


ensembl_gene_id: Z3122
symbol: Z3122
gene_biotype: protein_coding
description:
  Unknown protein encoded within prophage CP-933U; Residues 11 to 157 of 254 are 57.66 pct identical to residues 6 to 168 of 203 from GenPept 118 : gi|1787624|gb|AAC74443.1| (AE000233) orf, hypothetical protein [Escherichia coli].


ensembl_gene_id: Z3123
symbol: Z3123
gene_biotype: protein_coding
description:
  Unknown protein encoded within prophage CP-933U; Residues 92 to 220 of 220 are 47.28 pct identical to residues 102 to 229 of 229 from GenPept 118 : gi|14808|emb|CAA31475.1| (X13065) gene 14 (AA 1 - 229) [Bacteriophage phi-80].


ensembl_gene_id: Z3124
symbol: Z3124
gene_biotype: protein_coding
description:
  Unknown protein encoded within prophage CP-933U; Residues 197 to 281 of 345 are 50.53 pct identical to residues 85 to 176 of 179 from GenPept 118 : gi|1790824|gb|AAC77318.1| (AE000507) DNA biosynthesis; primosomal protein i [Escherichia coli].


ensembl_gene_id: Z3125
symbol: Z3125
gene_biotype: protein_coding
description:
  Unknown protein encoded within prophage CP-933U; Residues 1 to 141 of 141 are 31.25 pct identical to residues 1 to 140 of 140 from GenPept 118 : gi|1787621|gb|AAC74440.1| (AE000233) orf, hypothetical protein [Escherichia coli].


ensembl_gene_id: Z3126
symbol: Z3126
gene_biotype: protein_coding
description:
  Putative repressor protein of prophage CP-933U; Residues 5 to 193 of 196 are 30.92 pct identical to residues 6 to 192 of 216 from GenPept 118 : gi|8439602|gb|AAF75024.1| (AF217253) repressor protein [Bacteriophage P22].


ensembl_gene_id: Z3127
symbol: Z3127
gene_biotype: protein_coding
description:
  Unknown protein encoded within prophage CP-933U; Residues 1 to 49 of 50 are 81.63 pct identical to residues 1 to 49 of 51 from GenPept 118 : gi|1787854|gb|AAC74644.1| (AE000253) orf, hypothetical protein [Escherichia coli].


ensembl_gene_id: Z3128
symbol: Z3128
gene_biotype: protein_coding
description:
  Putative inhibitor of cell division encoded within prophage CP-933U; Residues 1 to 55 of 62 are 65.45 pct identical to residues 1 to 55 of 62 from GenPept 118 : gi|41280|emb|CAA30351.1| (X07465) DicB protein [Escherichia coli].


ensembl_gene_id: Z3129
symbol: exoU
gene_biotype: protein_coding
description:
  Putative exodeoxyribonuclease VIII of prophage CP-933U; Residues 1 to 255 of 823 are 88.62 pct identical to residues 1 to 255 of 306 from GenPept 118 : gi|1787859|gb|AAC74649.1| (AE000253) orf, hypothetical protein [Escherichia coli].


ensembl_gene_id: Z3130
symbol: intU
gene_biotype: protein_coding
description:
  Putative integrase for prophage CP-933U; Residues 1 to 316 of 340 are 24.70 pct identical to residues 1 to 342 of 357 from GenPept 118 : gi|6863136|gb|AAF30377.1|AF069308_25 (AF069308) integrase [Bacteriophage HK022]; Belongs to the 'phage' integrase family.


ensembl_gene_id: Z3132
symbol: mtfA
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Involved in the regulation of ptsG expression by binding and inactivating Mlc.


ensembl_gene_id: Z3135
symbol: Z3135
gene_biotype: protein_coding
description:
  Putative invasin; Residues 794 to 2660 of 2660 are 71.80 pct identical to residues 504 to 2383 of 2383 from Escherichia coli K-12 Strain MG1655: B1978; Belongs to the intimin/invasin family.


ensembl_gene_id: Z3137
symbol: Z3137
gene_biotype: protein_coding
description:
  Hypothetical protein; Residues 1 to 234 of 350 are 95.72 pct identical to residues 1 to 234 of 234 from Escherichia coli K-12 Strain MG1655: B1980.


ensembl_gene_id: Z3138
symbol: shiA
gene_biotype: protein_coding
description:
  Putative transport protein, shikimate; Residues 1 to 438 of 438 are 98.40 pct identical to residues 1 to 438 of 438 from Escherichia coli K-12 Strain MG1655: B1981.


ensembl_gene_id: Z3139
symbol: amn
gene_biotype: protein_coding
description:
  AMP nucleosidase; Catalyzes the hydrolysis of the N-glycosidic bond of AMP to form adenine and ribose 5-phosphate. Involved in regulation of AMP concentrations.


ensembl_gene_id: Z3140
symbol: yeeN
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 238 of 238 are 99.15 pct identical to residues 1 to 238 of 238 from Escherichia coli K-12 Strain MG1655: B1983.


ensembl_gene_id: Z3143
symbol: Z3143
gene_biotype: protein_coding
description:
  Hypothetical protein; Residues 1 to 107 of 107 are 98.13 pct identical to residues 441 to 547 of 547 from Escherichia coli K-12 Strain MG1655: B1985.


ensembl_gene_id: Z3144
symbol: Z3144
gene_biotype: protein_coding
description:
  Hypothetical protein; Residues 1 to 379 of 379 are 99.47 pct identical to residues 53 to 431 of 547 from Escherichia coli K-12 Strain MG1655: B1985.


ensembl_gene_id: Z3146
symbol: cbl
gene_biotype: protein_coding
description:
  Transcriptional regulator cys regulon; Residues 1 to 316 of 316 are 98.41 pct identical to residues 1 to 316 of 316 from Escherichia coli K-12 Strain MG1655: B1987; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: Z3147
symbol: nac
gene_biotype: protein_coding
description:
  Nitrogen assimilation control protein; Residues 1 to 305 of 305 are 99.34 pct identical to residues 1 to 305 of 305 from Escherichia coli K-12 Strain MG1655: B1988; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: Z3150
symbol: erfK
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 310 of 310 are 99.03 pct identical to residues 1 to 310 of 310 from Escherichia coli K-12 Strain MG1655: B1990.


ensembl_gene_id: Z3151
symbol: cobT
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide dimethylbenzimidazole-P phophoribosyl transferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB). Belongs to the CobT family.


ensembl_gene_id: Z3152
symbol: cobS
gene_biotype: protein_coding
description:
  Cobalamin 5'-phosphate synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.


ensembl_gene_id: Z3153
symbol: cobU
gene_biotype: protein_coding
description:
  Cobinamide kinase/cobinamide phosphate guanylyltransferase; Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate. Belongs to the CobU/CobP family.


ensembl_gene_id: Z3154
symbol: Z3154
gene_biotype: protein_coding
description:
  Unknown protein encoded by ISEc8; Residues 1 to 133 of 133 are 100.00 pct identical to residues 1 to 133 of 133 from GenPept 118 : gi|3414881|gb|AAC31492.1| (AF071034) L0013 [Escherichia coli].


ensembl_gene_id: Z3155
symbol: Z3155
gene_biotype: protein_coding
description:
  Unknown protein encoded by ISEc8; Residues 1 to 115 of 115 are 100.00 pct identical to residues 1 to 115 of 115 from GenPept 118 : gi|3661485|gb|AAC61716.1| (AF081284) Hp4 [Escherichia coli].


ensembl_gene_id: Z3156
symbol: Z3156
gene_biotype: protein_coding
description:
  Unknown protein encoded by ISEc8; Residues 1 to 512 of 512 are 100.00 pct identical to residues 1 to 512 of 512 from GenPept 118 : gi|3414883|gb|AAC31494.1| (AF071034) L0015 [Escherichia coli].


ensembl_gene_id: Z3159
symbol: yoeE
gene_biotype: protein_coding
description:
  Putative outer membrane receptor for iron compound or colicin; Residues 1 to 106 of 719 are 100.00 pct identical to residues 6 to 111 of 139 from Escherichia coli K-12 Strain MG1655: B1995.


ensembl_gene_id: Z3162
symbol: Z3162
gene_biotype: protein_coding
description:
  IS629 transposase; Residues 1 to 296 of 296 are 96.28 pct identical to residues 1 to 296 of 296 from GenPept 118 : gi|3822179|gb|AAC70133.1| (AF074613) transposase [Escherichia coli O157:H7].


ensembl_gene_id: Z3163
symbol: yeeT
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 73 of 73 are 100.00 pct identical to residues 1 to 73 of 73 from Escherichia coli K-12 Strain MG1655: B2003; Belongs to the YeeT/YkfH/YpjJ family.


ensembl_gene_id: Z3164
symbol: yeeU
gene_biotype: protein_coding
description:
  Putative structural protein; Residues 1 to 122 of 122 are 98.36 pct identical to residues 1 to 122 of 122 from Escherichia coli K-12 Strain MG1655: B2004.


ensembl_gene_id: Z3165
symbol: yeeV
gene_biotype: protein_coding
description:
  Hypothetical protein; Residues 1 to 73 of 87 are 100.00 pct identical to residues 1 to 73 of 124 from Escherichia coli K-12 Strain MG1655: B2005.


ensembl_gene_id: Z3166
symbol: yeeW
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 64 of 64 are 100.00 pct identical to residues 1 to 64 of 64 from Escherichia coli K-12 Strain MG1655: B2006.


ensembl_gene_id: Z3168
symbol: yeeX
gene_biotype: protein_coding
description:
  Putative alpha helix protein; Residues 1 to 131 of 131 are 100.00 pct identical to residues 1 to 131 of 131 from Escherichia coli K-12 Strain MG1655: B2007; Belongs to the UPF0265 family.


ensembl_gene_id: Z3169
symbol: yeeA
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 352 of 352 are 99.14 pct identical to residues 1 to 352 of 352 from Escherichia coli K-12 Strain MG1655: B2008.


ensembl_gene_id: Z3170
symbol: sbmC
gene_biotype: protein_coding
description:
  SbmC protein; Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell.


ensembl_gene_id: Z3171
symbol: dacD
gene_biotype: protein_coding
description:
  Penicillin binding protein 6b; Residues 1 to 390 of 390 are 99.23 pct identical to residues 1 to 390 of 390 from Escherichia coli K-12 Strain MG1655: B2010; Belongs to the peptidase S11 family.


ensembl_gene_id: Z3173
symbol: sbcB
gene_biotype: protein_coding
description:
  Exonuclease I, 3' --> 5' specific; Residues 1 to 475 of 475 are 98.94 pct identical to residues 1 to 475 of 475 from Escherichia coli K-12 Strain MG1655: B2011.


ensembl_gene_id: Z3174
symbol: yeeD
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 75 of 75 are 97.33 pct identical to residues 1 to 75 of 75 from Escherichia coli K-12 Strain MG1655: B2012; Belongs to the sulfur carrier protein TusA family.


ensembl_gene_id: Z3175
symbol: yeeE
gene_biotype: protein_coding
description:
  Putative transport system permease protein; Residues 1 to 352 of 352 are 97.72 pct identical to residues 1 to 352 of 352 from Escherichia coli K-12 Strain MG1655: B2013.


ensembl_gene_id: Z3176
symbol: yeeF
gene_biotype: protein_coding
description:
  Putative amino acid/amine transport protein; Putrescine importer; Belongs to the amino acid-polyamine-organocation (APC) superfamily.


ensembl_gene_id: Z3177
symbol: yeeY
gene_biotype: protein_coding
description:
  Putative transcriptional regulator LYSR-type; Residues 1 to 316 of 316 are 99.36 pct identical to residues 1 to 316 of 316 from Escherichia coli K-12 Strain MG1655: B2015; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: Z3178
symbol: yeeZ
gene_biotype: protein_coding
description:
  Putative enzyme of sugar metabolism; Residues 1 to 274 of 274 are 100.00 pct identical to residues 1 to 274 of 274 from Escherichia coli K-12 Strain MG1655: B2016.


ensembl_gene_id: Z3180
symbol: hisL
gene_biotype: protein_coding
description:
  His operon leader peptide; Residues 1 to 16 of 16 are 93.75 pct identical to residues 1 to 16 of 16 from Escherichia coli K-12 Strain MG1655: B2018.


ensembl_gene_id: Z3181
symbol: hisG
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity.


ensembl_gene_id: Z3182
symbol: hisD
gene_biotype: protein_coding
description:
  L-histidinal:NAD+ oxidoreductase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.


ensembl_gene_id: Z3183
symbol: hisC
gene_biotype: protein_coding
description:
  Histidinol-phosphate aminotransferase; Residues 1 to 356 of 356 are 99.43 pct identical to residues 1 to 356 of 356 from Escherichia coli K-12 Strain MG1655: B2021; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.


ensembl_gene_id: Z3184
symbol: hisB
gene_biotype: protein_coding
description:
  Imidazoleglycerolphosphate dehydratase and histidinol-phosphate phosphatase; Residues 1 to 356 of 356 are 99.43 pct identical to residues 1 to 356 of 356 from Escherichia coli K-12 Strain MG1655: B2022; In the C-terminal section; belongs to the imidazoleglycerol-phosphate dehydratase family.


ensembl_gene_id: Z3185
symbol: hisH
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase subunit HisH; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF (By similarity).


ensembl_gene_id: Z3186
symbol: hisA
gene_biotype: protein_coding
description:
  N-(5'-phospho-L-ribosyl-formimino)-5-amino-1- (5'-phosphoribosyl)-4-imidazolecarboxamide isomerase; Residues 1 to 246 of 246 are 98.37 pct identical to residues 1 to 246 of 246 from Escherichia coli K-12 Strain MG1655: B2024; Belongs to the HisA/HisF family.


ensembl_gene_id: Z3187
symbol: hisF
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase subunit HisF; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit (By similarity).


ensembl_gene_id: Z3188
symbol: hisI
gene_biotype: protein_coding
description:
  Phosphoribosyl-amp cyclohydrolase; Residues 1 to 203 of 203 are 98.52 pct identical to residues 1 to 203 of 203 from Escherichia coli K-12 Strain MG1655: B2026; In the C-terminal section; belongs to the PRA-PH family.


ensembl_gene_id: Z3189
symbol: wzzB
gene_biotype: protein_coding
description:
  Regulator of length of O-antigen component of lipopolysaccharide chains; Residues 1 to 337 of 337 are 97.63 pct identical to residues 1 to 338 of 338 from Escherichia coli K-12 Strain MG1655: B2027.


ensembl_gene_id: Z3190
symbol: ugd
gene_biotype: protein_coding
description:
  UDP-glucose 6-dehydrogenase; Residues 1 to 388 of 388 are 99.22 pct identical to residues 1 to 388 of 388 from Escherichia coli K-12 Strain MG1655: B2028; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.


ensembl_gene_id: Z3191
symbol: gnd
gene_biotype: protein_coding
description:
  Gluconate-6-phosphate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.


ensembl_gene_id: Z3192
symbol: wbdR
gene_biotype: protein_coding
description:
  Acetyl transferase; Catalyzes the transfer of an acetyl residue from acetyl-CoA onto GDP-perosamine to form GDP-N-acetyl-perosamine.


ensembl_gene_id: Z3194
symbol: manB
gene_biotype: protein_coding
description:
  Phosphomannomutase; Involved in GDP-mannose biosynthesis which serves as the activated sugar nucleotide precursor for mannose residues in cell surface polysaccharides. This enzyme participates in synthesis of the LPS O antigen.


ensembl_gene_id: Z3195
symbol: manC
gene_biotype: protein_coding
description:
  mannose-1-P guanosyltransferase; Involved in GDP-mannose biosynthesis which serves as the activated sugar nucleotide precursor for mannose residues in cell surface polysaccharides. This enzyme participates in synthesis of the LPS O antigen.


ensembl_gene_id: Z3196
symbol: wbdQ
gene_biotype: protein_coding
description:
  GDP-mannose mannosylhydrolase; It could participate in the regulation of cell wall biosynthesis by influencing the concentration of GDP-mannose or GDP- glucose in the cell. May be involved in the degradation of GDP-mannose and GDP-glucose, diverting the GDP to the synthesis of GDP-fucose as required (By similarity).


ensembl_gene_id: Z3197
symbol: fcI
gene_biotype: protein_coding
description:
  Fucose synthetase; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction.


ensembl_gene_id: Z3198
symbol: gmd-2
gene_biotype: protein_coding
description:
  GDP-mannose dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.


ensembl_gene_id: Z3199
symbol: wbdP
gene_biotype: protein_coding
description:
  Glycosyl transferase; Residues 1 to 404 of 404 are 100.00 pct identical to residues 1 to 404 of 404 from GenPept 118 : gi|3435176|gb|AAC32344.1| (AF061251) putative glycosyl transferase WbdP [Escherichia coli].


ensembl_gene_id: Z3200
symbol: per
gene_biotype: protein_coding
description:
  Perosamine synthetase; Catalyzes the synthesis of GDP-perosamine from GDP-4-keto-6- deoxy-D-mannose and L-glutamate. Can use only L-glutamate as amino donor; Belongs to the DegT/DnrJ/EryC1 family.


ensembl_gene_id: Z3201
symbol: wzx
gene_biotype: protein_coding
description:
  O antigen flippase Wzx; Residues 1 to 463 of 463 are 100.00 pct identical to residues 1 to 463 of 463 from GenPept 118 : gi|3435174|gb|AAC32342.1| (AF061251) O antigen flippase Wzx [Escherichia coli].


ensembl_gene_id: Z3202
symbol: wbdO
gene_biotype: protein_coding
description:
  Glycosyl transferase; Residues 1 to 248 of 248 are 100.00 pct identical to residues 1 to 248 of 248 from GenPept 118 : gi|3435173|gb|AAC32341.1| (AF061251) putative glycosyl transferase WbdO [Escherichia coli].


ensembl_gene_id: Z3203
symbol: wzy
gene_biotype: protein_coding
description:
  O antigen polymerase; Residues 1 to 394 of 394 are 99.74 pct identical to residues 1 to 394 of 394 from GenPept 118 : gi|3435172|gb|AAC32340.1| (AF061251) O antigen polymerase Wzy [Escherichia coli].


ensembl_gene_id: Z3204
symbol: wbdN
gene_biotype: protein_coding
description:
  Glycosyl transferase; Residues 1 to 260 of 260 are 100.00 pct identical to residues 1 to 260 of 260 from GenPept 118 : gi|4867915|dbj|BAA77724.1| (AB008676) glycosyl transferase [Escherichia coli].


ensembl_gene_id: Z3205
symbol: galF
gene_biotype: protein_coding
description:
  Homolog of Salmonella UTP--glucose-1-P uridyltransferase, probably a UDP-gal transferase; Residues 1 to 297 of 297 are 100.00 pct identical to residues 1 to 297 of 297 from Escherichia coli K-12 Strain MG1655: B2042.


ensembl_gene_id: Z3206
symbol: gnu
gene_biotype: protein_coding
description:
  Putative UDP-galactose 4-epimerase; Involved in biosynthesis of the repeating tetrasaccharide unit of the O-antigen. Catalyzes the reversible epimerization of the hydroxyl group at position C4 of undecaprenyl pyrophosphate-N- acetylglucosamine (UndPP-GlcNAc) to yield undecaprenyl pyrophosphate-N- acetylgalactosamine (UndPP-GalNAc).


ensembl_gene_id: Z3207
symbol: wcaM
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 464 of 464 are 96.55 pct identical to residues 1 to 464 of 464 from Escherichia coli K-12 Strain MG1655: B2043.


ensembl_gene_id: Z3208
symbol: wcaL
gene_biotype: protein_coding
description:
  Putative colanic acid biosynthesis glycosyl transferase; Residues 1 to 406 of 406 are 99.01 pct identical to residues 1 to 406 of 406 from Escherichia coli K-12 Strain MG1655: B2044.


ensembl_gene_id: Z3209
symbol: wcaK
gene_biotype: protein_coding
description:
  Putative galactokinase; Residues 1 to 426 of 426 are 99.06 pct identical to residues 1 to 426 of 426 from Escherichia coli K-12 Strain MG1655: B2045.


ensembl_gene_id: Z3210
symbol: wzxC
gene_biotype: protein_coding
description:
  Probable export protein; Residues 1 to 492 of 492 are 99.18 pct identical to residues 1 to 492 of 492 from Escherichia coli K-12 Strain MG1655: B2046.


ensembl_gene_id: Z3211
symbol: wcaJ
gene_biotype: protein_coding
description:
  Putative colanic acid biosynthsis UDP-glucose lipid carrier transferase; Residues 1 to 464 of 464 are 99.56 pct identical to residues 1 to 464 of 464 from Escherichia coli K-12 Strain MG1655: B2047.


ensembl_gene_id: Z3212
symbol: cpsG
gene_biotype: protein_coding
description:
  Phosphomannomutase; Residues 1 to 456 of 456 are 99.12 pct identical to residues 1 to 456 of 456 from Escherichia coli K-12 Strain MG1655: B2048.


ensembl_gene_id: Z3213
symbol: cpsB
gene_biotype: protein_coding
description:
  Mannose-1-phosphate guanyltransferase; Involved in GDP-mannose biosynthesis which serves as the activated sugar nucleotide precursor for mannose residues in cell surface polysaccharides. In vitro, shows very broad substrate specificities for four nucleotides and various hexose-1-phosphates, yielding ADP-mannose, CDP-mannose, UDP-mannose, GDP-mannose, GDP- glucose and GDP-2-deoxy-glucose; Belongs to the mannose-6-phosphate isomerase type 2 family.


ensembl_gene_id: Z3214
symbol: wcaI
gene_biotype: protein_coding
description:
  Putative colanic biosynthesis glycosyl transferase; Residues 1 to 407 of 407 are 99.26 pct identical to residues 1 to 407 of 407 from Escherichia coli K-12 Strain MG1655: B2050.


ensembl_gene_id: Z3216
symbol: wcaG
gene_biotype: protein_coding
description:
  Putative nucleotide di-P-sugar epimerase or dehydratase; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction.


ensembl_gene_id: Z3217
symbol: gmd
gene_biotype: protein_coding
description:
  GDP-D-mannose dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose; Belongs to the NAD(P)-dependent epimerase/dehydratase family. GDP-mannose 4,6-dehydratase subfamily.


ensembl_gene_id: Z3218
symbol: wcaF
gene_biotype: protein_coding
description:
  Putative transferase; Residues 1 to 182 of 182 are 98.90 pct identical to residues 1 to 182 of 182 from Escherichia coli K-12 Strain MG1655: B2054.


ensembl_gene_id: Z3219
symbol: wcaE
gene_biotype: protein_coding
description:
  Putative colanic acid biosynthesis glycosyl transferase; Residues 1 to 247 of 248 are 98.38 pct identical to residues 1 to 247 of 248 from Escherichia coli K-12 Strain MG1655: B2055.


ensembl_gene_id: Z3220
symbol: wcaD
gene_biotype: protein_coding
description:
  Putative colanic acid polymerase; Residues 1 to 405 of 405 are 99.50 pct identical to residues 1 to 405 of 405 from Escherichia coli K-12 Strain MG1655: B2056.


ensembl_gene_id: Z3221
symbol: wcaC
gene_biotype: protein_coding
description:
  Putative glycosyl transferase; Residues 1 to 405 of 405 are 99.50 pct identical to residues 1 to 405 of 405 from Escherichia coli K-12 Strain MG1655: B2057.


ensembl_gene_id: Z3222
symbol: wcaB
gene_biotype: protein_coding
description:
  Putative transferase; Residues 1 to 162 of 162 are 100.00 pct identical to residues 1 to 162 of 162 from Escherichia coli K-12 Strain MG1655: B2058.


ensembl_gene_id: Z3223
symbol: wcaA
gene_biotype: protein_coding
description:
  Putative regulator; Residues 1 to 279 of 279 are 99.64 pct identical to residues 1 to 279 of 279 from Escherichia coli K-12 Strain MG1655: B2059.


ensembl_gene_id: Z3224
symbol: wzc
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Required for the extracellular polysaccharide colanic acid synthesis. The autophosphorylated form is inactive. Probably involved in the export of colanic acid from the cell to medium. Phosphorylates udg (By similarity); Belongs to the etk/wzc family.


ensembl_gene_id: Z3226
symbol: wzb
gene_biotype: protein_coding
description:
  Probable protein-tyrosine-phosphatase; Dephosphorylates Wzc. Required for the extracellular polysaccharide colanic acid synthesis. Probably involved in the export of colanic acid from the cell to medium. Involved in protection of cells against contact-dependent growth inhibition (CDI).


ensembl_gene_id: Z3227
symbol: wza
gene_biotype: protein_coding
description:
  Putative polysaccharide export protein; Probably involved in the export of the extracellular polysaccharide colanic acid from the cell to medium.


ensembl_gene_id: Z3229
symbol: yegH
gene_biotype: protein_coding
description:
  Putative transport protein; Residues 1 to 549 of 549 are 99.81 pct identical to residues 1 to 549 of 549 from Escherichia coli K-12 Strain MG1655: B2063.


ensembl_gene_id: Z3230
symbol: Z3230
gene_biotype: protein_coding
description:
  Hypothetical protein; Residues 8 to 110 of 112 are 63.10 pct identical to residues 1 to 103 of 105 from GenPept 118 : gi|6960288|gb|AAF33478.1| (AF233324) contains similarity to Bacteriophage N15 (GP49) (GB:AF064539) and Yersinia pestis unfinished genomic sequence (TBLASTX).


ensembl_gene_id: Z3231
symbol: Z3231
gene_biotype: protein_coding
description:
  Hypothetical protein; Residues 14 to 82 of 96 are 32.85 pct identical to residues 35 to 104 of 113 from GenPept 118 : gi|6960297|gb|AAF33487.1| (AF233324) hypothetical protein predicted by Glimmer [Salmonella typhimurium LT2].


ensembl_gene_id: Z3232
symbol: asmA
gene_biotype: protein_coding
description:
  Suppressor of ompF assembly mutants; Residues 1 to 617 of 617 are 99.51 pct identical to residues 1 to 617 of 617 from Escherichia coli K-12 Strain MG1655: B2064.


ensembl_gene_id: Z3234
symbol: udk
gene_biotype: protein_coding
description:
  Uridine/cytidine kinase; Residues 1 to 231 of 231 are 100.00 pct identical to residues 1 to 231 of 231 from Escherichia coli K-12 Strain MG1655: B2066; Belongs to the uridine kinase family.


ensembl_gene_id: Z3235
symbol: Z3235
gene_biotype: protein_coding
description:
  Partial putative sensor kinase; Residues 1 to 152 of 177 are 99.34 pct identical to residues 1 to 152 of 1105 from Escherichia coli K-12 Strain MG1655: B2067.


ensembl_gene_id: Z3236
symbol: Z3236
gene_biotype: protein_coding
description:
  Partial putative sensor kinase; Residues 1 to 935 of 935 are 98.93 pct identical to residues 171 to 1105 of 1105 from Escherichia coli K-12 Strain MG1655: B2067.


ensembl_gene_id: Z3237
symbol: alkA
gene_biotype: protein_coding
description:
  3-methyl-adenine DNA glycosylase II, inducible; Residues 1 to 282 of 282 are 97.16 pct identical to residues 1 to 282 of 282 from Escherichia coli K-12 Strain MG1655: B2068.


ensembl_gene_id: Z3238
symbol: yegD
gene_biotype: protein_coding
description:
  Putative heat shock protein; Residues 1 to 471 of 471 are 98.93 pct identical to residues 1 to 471 of 471 from Escherichia coli K-12 Strain MG1655: B2069.


ensembl_gene_id: Z3240
symbol: yegK
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 251 of 253 are 92.03 pct identical to residues 1 to 251 of 253 from Escherichia coli K-12 Strain MG1655: B2072.


ensembl_gene_id: Z3241
symbol: yegL
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 219 of 219 are 98.63 pct identical to residues 1 to 219 of 219 from Escherichia coli K-12 Strain MG1655: B2073.


ensembl_gene_id: Z3243
symbol: mdtA
gene_biotype: protein_coding
description:
  Putative membrane protein; The MdtABC tripartite complex confers resistance against novobiocin and deoxycholate; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: Z3244
symbol: yegN
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; The MdtABC tripartite complex confers resistance against novobiocin and deoxycholate; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. MdtB subfamily.


ensembl_gene_id: Z3245
symbol: yegO
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; The MdtABC tripartite complex confers resistance against novobiocin and deoxycholate; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. MdtC subfamily.


ensembl_gene_id: Z3246
symbol: yegB
gene_biotype: protein_coding
description:
  Putative transport protein; Residues 1 to 471 of 471 are 98.93 pct identical to residues 1 to 471 of 471 from Escherichia coli K-12 Strain MG1655: B2077.


ensembl_gene_id: Z3247
symbol: baeS
gene_biotype: protein_coding
description:
  Sensor protein (for BaeR); Residues 1 to 467 of 467 are 99.35 pct identical to residues 1 to 467 of 467 from Escherichia coli K-12 Strain MG1655: B2078.


ensembl_gene_id: Z3248
symbol: baeR
gene_biotype: protein_coding
description:
  Transcriptional response regulatory protein (sensor BaeS); Residues 1 to 240 of 240 are 99.58 pct identical to residues 1 to 240 of 240 from Escherichia coli K-12 Strain MG1655: B2079.


ensembl_gene_id: Z3249
symbol: yegP
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 123 of 123 are 97.56 pct identical to residues 1 to 123 of 123 from Escherichia coli K-12 Strain MG1655: B2080; Belongs to the UPF0339 family. Duplicated subfamily.


ensembl_gene_id: Z3250
symbol: yegQ
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 453 of 453 are 99.77 pct identical to residues 1 to 453 of 453 from Escherichia coli K-12 Strain MG1655: B2081.


ensembl_gene_id: Z3251
symbol: yegR
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 125 of 125 are 95.99 pct identical to residues 1 to 125 of 125 from Escherichia coli K-12 Strain MG1655: B2085.


ensembl_gene_id: Z3253
symbol: gatR
gene_biotype: protein_coding
description:
  Galactitol utilization operon repressor; Residues 1 to 148 of 148 are 99.32 pct identical to residues 1 to 148 of 148 from Escherichia coli K-12 Strain MG1655: B2087.


ensembl_gene_id: Z3255
symbol: gatC
gene_biotype: protein_coding
description:
  PTS system galactitol-specific enzyme IIC; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. The enzyme II complex composed of GatA, GatB and GatC is involved in galactitol transport.


ensembl_gene_id: Z3256
symbol: gatB
gene_biotype: protein_coding
description:
  Galactitol-specific enzyme IIB of phosphotransferase system; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. The enzyme II complex composed of GatA, GatB and GatC is involved in galactitol transport.


ensembl_gene_id: Z3257
symbol: gatA
gene_biotype: protein_coding
description:
  Galactitol-specific enzyme IIA of phosphotransferase system; The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. The enzyme II complex composed of GatA, GatB and GatC is involved in galactitol transport.


ensembl_gene_id: Z3258
symbol: gatZ
gene_biotype: protein_coding
description:
  Putative tagatose 6-phosphate kinase 1; Component of the tagatose-1,6-bisphosphate aldolase GatYZ that is required for full activity and stability of the Y subunit. Could have a chaperone-like function for the proper and stable folding of GatY. When expressed alone, GatZ does not show any aldolase activity. Is involved in the catabolism of galactitol (By similarity).


ensembl_gene_id: Z3259
symbol: gatY
gene_biotype: protein_coding
description:
  Tagatose-bisphosphate aldolase 1; Catalytic subunit of the tagatose-1,6-bisphosphate aldolase GatYZ, which catalyzes the reversible aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to produce tagatose 1,6-bisphosphate (TBP). Requires GatZ subunit for full activity and stability. Is involved in the catabolism of galactitol.


ensembl_gene_id: Z3260
symbol: fbaB
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 374 of 374 are 100.00 pct identical to residues 1 to 374 of 374 from Escherichia coli K-12 Strain MG1655: B2097.


ensembl_gene_id: Z3261
symbol: yegT
gene_biotype: protein_coding
description:
  Putative nucleoside permease protein; Residues 1 to 425 of 425 are 99.05 pct identical to residues 1 to 425 of 425 from Escherichia coli K-12 Strain MG1655: B2098.


ensembl_gene_id: Z3262
symbol: yegU
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 333 of 334 are 98.79 pct identical to residues 1 to 333 of 334 from Escherichia coli K-12 Strain MG1655: B2099.


ensembl_gene_id: Z3263
symbol: yegV
gene_biotype: protein_coding
description:
  Putative kinase; Residues 1 to 321 of 321 are 97.81 pct identical to residues 1 to 321 of 321 from Escherichia coli K-12 Strain MG1655: B2100; Belongs to the carbohydrate kinase PfkB family.


ensembl_gene_id: Z3264
symbol: yegW
gene_biotype: protein_coding
description:
  Putative transcriptional regulator; Residues 1 to 248 of 248 are 100.00 pct identical to residues 1 to 248 of 248 from Escherichia coli K-12 Strain MG1655: B2101.


ensembl_gene_id: Z3266
symbol: yegX
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 275 of 275 are 97.45 pct identical to residues 1 to 275 of 275 from Escherichia coli K-12 Strain MG1655: B2102; Belongs to the glycosyl hydrolase 25 family.


ensembl_gene_id: Z3267
symbol: thiD
gene_biotype: protein_coding
description:
  Phosphomethylpyrimidine kinase; Residues 1 to 266 of 266 are 99.62 pct identical to residues 1 to 266 of 266 from Escherichia coli K-12 Strain MG1655: B2103.


ensembl_gene_id: Z3268
symbol: thiM
gene_biotype: protein_coding
description:
  Hydoxyethylthiazole kinase; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family.


ensembl_gene_id: Z3273
symbol: yohL
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Repressor of rcnA expression. Acts by binding specifically to the rcnA promoter in the absence of nickel and cobalt. In the presence of one of these metals, it has a weaker affinity for rcnA promoter (By similarity); Belongs to the FrmR/RcnR family.


ensembl_gene_id: Z3275
symbol: rcnB
gene_biotype: protein_coding
description:
  Hypothetical protein; Residues 1 to 172 of 172 are 94.76 pct identical to residues 1 to 172 of 172 from Escherichia coli K-12 Strain MG1655: B2107.


ensembl_gene_id: Z3276
symbol: yehA
gene_biotype: protein_coding
description:
  Putative fimbrial protein; Residues 138 to 344 of 344 are 44.76 pct identical to residues 141 to 344 of 344 from GenPept 118 : gi|1788426|gb|AAC75169.1| (AE000300) putative type-1 fimbrial protein [Escherichia coli].


ensembl_gene_id: Z3277
symbol: yehB
gene_biotype: protein_coding
description:
  Putative outer membrane protein; Residues 1 to 826 of 826 are 92.49 pct identical to residues 1 to 826 of 826 from Escherichia coli K-12 Strain MG1655: B2109.


ensembl_gene_id: Z3278
symbol: yehC
gene_biotype: protein_coding
description:
  Putative chaperone protein; Residues 11 to 240 of 240 are 87.82 pct identical to residues 10 to 239 of 239 from Escherichia coli K-12 Strain MG1655: B2110.


ensembl_gene_id: Z3279
symbol: yehD
gene_biotype: protein_coding
description:
  Putative fimbrial-like protein; Residues 1 to 180 of 180 are 85.55 pct identical to residues 1 to 180 of 180 from Escherichia coli K-12 Strain MG1655: B2111.


ensembl_gene_id: Z3280
symbol: yehE
gene_biotype: protein_coding
description:
  Hypothetical protein; Residues 1 to 93 of 93 are 69.89 pct identical to residues 1 to 93 of 93 from Escherichia coli K-12 Strain MG1655: B2112.


ensembl_gene_id: Z3281
symbol: mrp
gene_biotype: protein_coding
description:
  Putative ATPase; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.


ensembl_gene_id: Z3282
symbol: metG
gene_biotype: protein_coding
description:
  Methionine tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.


ensembl_gene_id: Z3283
symbol: molR_A
gene_biotype: protein_coding
description:
  Putative regulator (fragment); Residues 1 to 218 of 242 are 37.75 pct identical to residues 1 to 244 of 274 from Escherichia coli K-12 Strain MG1655: B2115.


ensembl_gene_id: Z3284
symbol: molR_B
gene_biotype: protein_coding
description:
  Putative regulator (fragment); Residues 3 to 962 of 963 are 32.44 pct identical to residues 230 to 1209 of 1210 from Escherichia coli K-12 Strain MG1655: B2118.


ensembl_gene_id: Z3285
symbol: molR_C
gene_biotype: protein_coding
description:
  Putative regulator (fragment); Residues 100 to 402 of 426 are 43.03 pct identical to residues 5 to 309 of 1210 from Escherichia coli K-12 Strain MG1655: B2118.


ensembl_gene_id: Z3286
symbol: molR_D
gene_biotype: protein_coding
description:
  Putative regulator (fragment); Residues 265 to 579 of 579 are 94.92 pct identical to residues 19 to 333 of 333 from Escherichia coli K-12 Strain MG1655: B2117.


ensembl_gene_id: Z3287
symbol: yehI
gene_biotype: protein_coding
description:
  Putative regulator; Residues 1 to 1209 of 1209 are 94.04 pct identical to residues 1 to 1210 of 1210 from Escherichia coli K-12 Strain MG1655: B2118.


ensembl_gene_id: Z3288
symbol: yehK
gene_biotype: protein_coding
description:
  Hypothetical protein; Residues 1 to 105 of 105 are 99.04 pct identical to residues 1 to 105 of 105 from GenPept 118 : gi|405847|gb|AAA60479.1| (U00007) yehK [Escherichia coli].


ensembl_gene_id: Z3291
symbol: yehL
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 384 of 384 are 98.95 pct identical to residues 1 to 384 of 384 from Escherichia coli K-12 Strain MG1655: B2119.


ensembl_gene_id: Z3292
symbol: Z3292
gene_biotype: protein_coding
description:
  Hypothetical protein; Residues 1 to 509 of 509 are 96.26 pct identical to residues 1 to 509 of 759 from Escherichia coli K-12 Strain MG1655: B2120.


ensembl_gene_id: Z3293
symbol: Z3293
gene_biotype: protein_coding
description:
  Hypothetical protein; Residues 1 to 243 of 243 are 97.94 pct identical to residues 517 to 759 of 759 from Escherichia coli K-12 Strain MG1655: B2120.


ensembl_gene_id: Z3294
symbol: yehP
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 378 of 378 are 98.14 pct identical to residues 1 to 378 of 378 from Escherichia coli K-12 Strain MG1655: B2121.


ensembl_gene_id: Z3295
symbol: yehQ
gene_biotype: protein_coding
description:
  Hypothetical protein; Residues 1 to 615 of 745 are 95.93 pct identical to residues 9 to 622 of 622 from Escherichia coli K-12 Strain MG1655: B2122.


ensembl_gene_id: Z3297
symbol: IS629-2
gene_biotype: protein_coding
description:
  Putative transposase for IS629; Residues 1 to 296 of 296 are 99.66 pct identical to residues 1 to 296 of 296 from GenPept 118 : gi|3822179|gb|AAC70133.1| (AF074613) transposase [Escherichia coli O157:H7].


ensembl_gene_id: Z3300
symbol: yehR
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 157 of 157 are 100.00 pct identical to residues 1 to 157 of 157 from Escherichia coli K-12 Strain MG1655: B2123.


ensembl_gene_id: Z3301
symbol: yehS
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 155 of 156 are 100.00 pct identical to residues 1 to 155 of 156 from Escherichia coli K-12 Strain MG1655: B2124.


ensembl_gene_id: Z3302
symbol: yehT
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Member of the two-component regulatory system BtsS/BtsR. BtsR regulates expression of btsT by binding to its promoter region.


ensembl_gene_id: Z3303
symbol: yehU
gene_biotype: protein_coding
description:
  Putative 2-component sensor protein; Residues 1 to 561 of 561 are 99.64 pct identical to residues 1 to 561 of 561 from Escherichia coli K-12 Strain MG1655: B2126.


ensembl_gene_id: Z3305
symbol: Z3305
gene_biotype: protein_coding
description:
  Unknown protein encoded within prophage CP-933V; Residues 1 to 80 of 82 are 42.50 pct identical to residues 1 to 76 of 79 from GenPept 118 : gi|5738236|gb|AAD50308.1|AF175466_2 (AF175466) DNA damage-inducible protein DinI [Serratia marcescens]; Belongs to the DinI family.


ensembl_gene_id: Z3306
symbol: Z3306
gene_biotype: protein_coding
description:
  Unknown protein encoded within prophage CP-933V; Residues 1 to 89 of 89 are 94.38 pct identical to residues 41 to 129 of 129 from GenPept 118 : gi|4585437|gb|AAD25465.1|AF125520_60 (AF125520) hypothetical protein [Bacteriophage 933W].


ensembl_gene_id: Z3307
symbol: Z3307
gene_biotype: protein_coding
description:
  Partial putative tail fiber protein encoded within prophage CP-933V; Residues 1 to 92 of 92 are 93.47 pct identical to residues 554 to 645 of 645 from GenPept 118 : gi|4585436|gb|AAD25464.1|AF125520_59 (AF125520) putative tail fiber protein [Bacteriophage 933W].


ensembl_gene_id: Z3309
symbol: Z3309
gene_biotype: protein_coding
description:
  Putative tail fiber protein encoded within prophage CP-933V; Residues 1 to 244 of 271 are 64.94 pct identical to residues 1 to 251 of 1122 from GenPept 118 : gi|1787636|gb|AAC74454.1| (AE000234) putative membrane protein [Escherichia coli].


ensembl_gene_id: Z3310
symbol: Z3310
gene_biotype: protein_coding
description:
  Putative Lom-like outer membrane protein of prophage CP-933V; Residues 1 to 199 of 199 are 68.34 pct identical to residues 1 to 199 of 199 from GenPept 118 : gi|7532789|gb|AAF63231.1|AF151091_2 (AF151091) Lom [prophage P-EibA].


ensembl_gene_id: Z3311
symbol: Z3311
gene_biotype: protein_coding
description:
  Putative tail fiber protein of prophage CP-933V; Residues 1to 1164 of 1165 are 70.85 pct identical to residues 1to 1131 of 1132 from GenPept 118 : gi|215125|gb|AAA96553.1| (J02459) J (tail:host specificity;1132) [bacteriophage lambda].


ensembl_gene_id: Z3312
symbol: Z3312
gene_biotype: protein_coding
description:
  Putative superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.


ensembl_gene_id: Z3313
symbol: Z3313
gene_biotype: protein_coding
description:
  Putative tail component of prophage CP-933V; Residues 1 to 224 of 226 are 69.33 pct identical to residues 1 to 223 of 223 from GenPept 118 : gi|215124|gb|AAA96552.1| (J02459) I (tail component;223) [bacteriophage lambda].


ensembl_gene_id: Z3314
symbol: Z3314
gene_biotype: protein_coding
description:
  Putative tail component of prophage CP-933V; Residues 26 to 221 of 224 are 86.22 pct identical to residues 1 to 196 of 199 from GenPept 118 : gi|215123|gb|AAA96551.1| (J02459) K (tail component;199) [bacteriophage lambda].


ensembl_gene_id: Z3315
symbol: Z3315
gene_biotype: protein_coding
description:
  Putative tail component of prophage CP-933V; Residues 1 to 232 of 232 are 75.86 pct identical to residues 1 to 232 of 232 from GenPept 118 : gi|215122|gb|AAA96550.1| (J02459) L (tail component;232) [bacteriophage lambda].


ensembl_gene_id: Z3318
symbol: Z3318
gene_biotype: protein_coding
description:
  Putative tail component of prophage CP-933V; Residues 1to 962 of 969 are 53.92 pct identical to residues 1to 1015 of 1089 from GenPept 118 : gi|6901589|gb|AAF31092.1|AF069529_5 (AF069529) tail length tape measure protein [Bacteriophage HK97].


ensembl_gene_id: Z3319
symbol: Z3319
gene_biotype: protein_coding
description:
  Unknown protein encoded within prophage CP-933V; Residues 1 to 90 of 93 are 61.11 pct identical to residues 133 to 222 of 224 from GenPept 118 : gi|6901601|gb|AAF31104.1| (AF069529) Gp14 [Bacteriophage HK97].


ensembl_gene_id: Z3320
symbol: Z3320
gene_biotype: protein_coding
description:
  Unknown protein encoded within prophage CP-933V; Residues 1 to 124 of 124 are 62.90 pct identical to residues 1 to 123 of 224 from GenPept 118 : gi|6901601|gb|AAF31104.1| (AF069529) Gp14 [Bacteriophage HK97].


ensembl_gene_id: Z3322
symbol: Z3322
gene_biotype: protein_coding
description:
  Putative major tail subunit encoded within prophage CP-933V; Residues 44 to 277 of 281 are 67.52 pct identical to residues 1 to 234 of 234 from GenPept 118 : gi|6901588|gb|AAF31091.1|AF069529_4 (AF069529) major tail subunit [Bacteriophage HK97].


ensembl_gene_id: Z3323
symbol: Z3323
gene_biotype: protein_coding
description:
  Unknown protein encoded within prophage CP-933V; Residues 1 to 113 of 114 are 49.12 pct identical to residues 1 to 114 of 115 from GenPept 118 : gi|6901599|gb|AAF31102.1| (AF069529) Gp11 [Bacteriophage HK97].


ensembl_gene_id: Z3325
symbol: Z3325
gene_biotype: protein_coding
description:
  Unknown protein encoded within prophage CP-933V; Residues 1 to 148 of 148 are 75.16 pct identical to residues 1 to 149 of 149 from GenPept 118 : gi|6901598|gb|AAF31101.1| (AF069529) Gp10 [Bacteriophage HK97].


ensembl_gene_id: Z3326
symbol: Z3326
gene_biotype: protein_coding
description:
  Unknown protein encoded within prophage CP-933V; Residues 6 to 116 of 116 are 45.94 pct identical to residues 4 to 112 of 112 from GenPept 118 : gi|6901597|gb|AAF31100.1| (AF069529) putative head-tail adaptor [Bacteriophage HK97].


ensembl_gene_id: Z3328
symbol: Z3328
gene_biotype: protein_coding
description:
  Putative portal protein for prophage CP-933V; Residues 1 to 418 of 861 are 25.64 pct identical to residues 1 to 407 of 410 from GenPept 118 : gi|6739661|gb|AAF27362.1|AF198256_16 (AF198256) phage phi-105 ORF25-like protein [Haemophilus influenzae].


ensembl_gene_id: Z3331
symbol: Z3331
gene_biotype: protein_coding
description:
  Unknown protein encoded within prophage CP-933V; Residues 339 to 618 of 645 are 23.33 pct identical to residues 22 to 302 of 326 from GenPept 118 : gi|15873|emb|CAA79393.1| (Z18946) observed 35.2Kd protein [Mycobacteriophage l5].


ensembl_gene_id: Z3332
symbol: Z3332
gene_biotype: protein_coding
description:
  Unknown protein encoded within prophage CP-933V; Residues 58 to 529 of 553 are 22.57 pct identical to residues 70 to 520 of 555 from GenPept 118 : gi|6739656|gb|AAF27357.1|AF198256_11 (AF198256) phage D3 terminase-like protein [Haemophilus influenzae].


ensembl_gene_id: Z3335
symbol: Z3335
gene_biotype: protein_coding
description:
  Unknown protein encoded within prophage CP-933V; Residues 1 to 67 of 75 are 70.14 pct identical to residues 1 to 64 of 64 from GenPept 118 : gi|1778472|gb|AAB40755.1| (U82598) hypothetical protein [Escherichia coli].


ensembl_gene_id: Z3336
symbol: Z3336
gene_biotype: protein_coding
description:
  Putative endopeptidase Rz for prophage CP-933V; Residues 1 to 155 of 155 are 98.70 pct identical to residues 1 to 155 of 155 from GenPept 118 : gi|5881639|dbj|BAA84330.1| (AP000363) Rz [Bacteriophage VT2-Sa].


ensembl_gene_id: Z3337
symbol: antV
gene_biotype: protein_coding
description:
  Putative antirepressor of prophage CP-933V; Residues 1 to 189 of 189 are 100.00 pct identical to residues 1 to 189 of 189 from GenPept 118 : gi|4585423|gb|AAD25451.1|AF125520_46 (AF125520) putative antirepressor protein Ant [Bacteriophage 933W].


ensembl_gene_id: Z3340
symbol: Z3340
gene_biotype: protein_coding
description:
  Putative lysis protein S of prophage CP-933V; Residues 1 to 90 of 90 are 98.88 pct identical to residues 7 to 96 of 96 from GenPept 118 : gi|5881636|dbj|BAA84327.1| (AP000363) S [Bacteriophage VT2-Sa].


ensembl_gene_id: Z3341
symbol: Z3341
gene_biotype: protein_coding
description:
  Unknown protein encoded within prophage CP-933V; Residues 1 to 139 of 139 are 100.00 pct identical to residues 1 to 139 of 139 from GenPept 118 : gi|5881635|dbj|BAA84326.1| (AP000363) hypothetical protein [Bacteriophage VT2-Sa].


ensembl_gene_id: Z3342
symbol: Z3342
gene_biotype: protein_coding
description:
  Unknown protein encoded within prophage CP-933V; Residues 1 to 648 of 648 are 92.59 pct identical to residues 1 to 645 of 645 from GenPept 118 : gi|5881634|dbj|BAA84325.1| (AP000363) hypothetical protein [Bacteriophage VT2-Sa].


ensembl_gene_id: Z3343
symbol: stx1B
gene_biotype: protein_coding
description:
  Shiga-like toxin 1 subunit B encoded within prophage CP-933V; Residues 1 to 89 of 89 are 100.00 pct identical to residues 1 to 89 of 89 from GenPept 118 : gi|2668770|gb|AAD04657.1| (AF034975) Shiga-like toxin B subunit [Bacteriophage H-19B].


ensembl_gene_id: Z3344
symbol: stx1A
gene_biotype: protein_coding
description:
  Shiga-like toxin 1 subunit A encoded within prophage CP-933V; Residues 1 to 315 of 315 are 100.00 pct identical to residues 1 to 315 of 315 from GenPept 118 : gi|6759963|gb|AAF28121.1|AF153317_17 (AF153317) StxA [Shigella dysenteriae].


ensembl_gene_id: Z3345
symbol: Z3345
gene_biotype: protein_coding
description:
  Putative antitermination protein Q for prophage CP-933V; Residues 1 to 144 of 144 are 97.91 pct identical to residues 14 to 157 of 157 from GenPept 118 : gi|4585416|gb|AAD25444.1|AF125520_39 (AF125520) antitermination protein Q [Bacteriophage 933W].


ensembl_gene_id: Z3346
symbol: Z3346
gene_biotype: protein_coding
description:
  Unknown protein encoded within prophage CP-933V; Residues 1 to 201 of 201 are 96.51 pct identical to residues 1 to 201 of 201 from GenPept 118 : gi|4585414|gb|AAD25442.1|AF125520_37 (AF125520) hypothetical protein [Bacteriophage 933W].


ensembl_gene_id: Z3347
symbol: Z3347
gene_biotype: protein_coding
description:
  Unknown protein encoded within prophage CP-933V; Residues 1 to 24 of 24 are 91.66 pct identical to residues 33 to 56 of 56 from GenPept 118 : gi|215157|gb|AAA96591.1| (J02459) Nin 56 (pept unknown;56) [bacteriophage lambda].


ensembl_gene_id: Z3349
symbol: Z3349
gene_biotype: protein_coding
description:
  Putative DNA methyltransferase encoded within prophage CP-933V; Residues 1 to 175 of 175 are 98.85 pct identical to residues 1 to 175 of 175 from GenPept 118 : gi|5881624|dbj|BAA84315.1| (AP000363) hypothetical protein [Bacteriophage VT2-Sa].


ensembl_gene_id: Z3351
symbol: Z3351
gene_biotype: protein_coding
description:
  Unknown protein encoded within prophage CP-933V; Residues 1 to 141 of 141 are 100.00 pct identical to residues 1 to 141 of 148 from GenPept 118 : gi|4585410|gb|AAD25438.1|AF125520_33 (AF125520) hypothetical protein [Bacteriophage 933W].


ensembl_gene_id: Z3352
symbol: Z3352
gene_biotype: protein_coding
description:
  Unknown protein encoded within prophage CP-933V; Residues 1 to 119 of 119 are 100.00 pct identical to residues 1 to 119 of 119 from GenPept 118 : gi|4585409|gb|AAD25437.1|AF125520_32 (AF125520) hypothetical protein [Bacteriophage 933W].


ensembl_gene_id: Z3353
symbol: Z3353
gene_biotype: protein_coding
description:
  Unknown protein encoded within prophage CP-933V; Residues 1 to 92 of 92 are 100.00 pct identical to residues 1 to 92 of 92 from GenPept 118 : gi|4585408|gb|AAD25436.1|AF125520_31 (AF125520) hypothetical protein [Bacteriophage 933W].


ensembl_gene_id: Z3355
symbol: Z3355
gene_biotype: protein_coding
description:
  Putative DNA replication protein P of prophage CP-933V; Residues 1 to 233 of 233 are 98.71 pct identical to residues 1 to 233 of 233 from GenPept 118 : gi|4585406|gb|AAD25434.1|AF125520_29 (AF125520) replication protein P [Bacteriophage 933W].


ensembl_gene_id: Z3356
symbol: Z3356
gene_biotype: protein_coding
description:
  Putative DNA replication protein O of prophage CP-933V; Residues 1 to 312 of 312 are 99.35 pct identical to residues 1 to 312 of 312 from GenPept 118 : gi|4585405|gb|AAD25433.1|AF125520_28 (AF125520) replication protein O [Bacteriophage 933W].


ensembl_gene_id: Z3357
symbol: Z3357
gene_biotype: protein_coding
description:
  Putative regulatory protein CII of prophage CP-933V; Residues 1 to 98 of 98 are 94.89 pct identical to residues 1 to 98 of 98 from GenPept 118 : gi|4585404|gb|AAD25432.1|AF125520_27 (AF125520) regulatory protein CII [Bacteriophage 933W].


ensembl_gene_id: Z3358
symbol: Z3358
gene_biotype: protein_coding
description:
  Putative repressor protein CI of prophage CP-933V; Residues 5 to 215 of 215 are 47.29 pct identical to residues 4 to 217 of 217 from GenPept 118 : gi|7649844|dbj|BAA94122.1| (AP000422) CI protein [Escherichia coli O157:H7].


ensembl_gene_id: Z3361
symbol: Z3361
gene_biotype: protein_coding
description:
  Putative transcription antitermination protein N of prophage CP-933V; Residues 1 to 64 of 90 are 98.43 pct identical to residues 1 to 64 of 99 from GenPept 118 : gi|215259|gb|AAD15033.1| (K03423) transcription antitermination protein [Bacteriophage phi-21].


ensembl_gene_id: Z3362
symbol: Z3362
gene_biotype: protein_coding
description:
  Putative superinfection exclusion protein B of prophage CP-933V; Residues 1 to 147 of 153 are 89.11 pct identical to residues 1 to 147 of 192 from GenPept 118 : gi|8439600|gb|AAF75022.1| (AF217253) superinfection exclusion protein [Bacteriophage P22].


ensembl_gene_id: Z3363
symbol: Z3363
gene_biotype: protein_coding
description:
  Putative single-stranded DNA binding protein of prophage CP-933V; Residues 1 to 122 of 122 are 100.00 pct identical to residues 1 to 122 of 122 from GenPept 118 : gi|4585395|gb|AAD25423.1|AF125520_18 (AF125520) putative single-stranded DNA binding protein [Bacteriophage 933W].


ensembl_gene_id: Z3364
symbol: Z3364
gene_biotype: protein_coding
description:
  Putative host killing protein Kil of prophage CP-933V; Residues 1 to 89 of 89 are 100.00 pct identical to residues 1 to 89 of 89 from GenPept 118 : gi|4585393|gb|AAD25421.1|AF125520_16 (AF125520) Kil protein [Bacteriophage 933W].


ensembl_gene_id: Z3365
symbol: Z3365
gene_biotype: protein_coding
description:
  Putative host-nuclease inhibitor protein Gam of prophage CP-933V; Residues 1 to 98 of 98 are 98.97 pct identical to residues 1 to 98 of 98 from GenPept 118 : gi|4585392|gb|AAD25420.1|AF125520_15 (AF125520) host-nuclease inhibitor protein Gam [Bacteriophage 933W].


ensembl_gene_id: Z3366
symbol: Z3366
gene_biotype: protein_coding
description:
  Putative recombination protein Bet of prophage CP-933V; Residues 1 to 261 of 261 are 100.00 pct identical to residues 1 to 261 of 261 from GenPept 118 : gi|4585391|gb|AAD25419.1|AF125520_14 (AF125520) Bet protein [Bacteriophage 933W].


ensembl_gene_id: Z3367
symbol: Z3367
gene_biotype: protein_coding
description:
  Putative exonuclease of prophage CP-933V; Residues 1 to 225 of 225 are 100.00 pct identical to residues 1 to 225 of 225 from GenPept 118 : gi|4585390|gb|AAD25418.1|AF125520_13 (AF125520) exonuclease [Bacteriophage 933W].


ensembl_gene_id: Z3368
symbol: Z3368
gene_biotype: protein_coding
description:
  Unknown protein encoded within prophage CP-933V; Residues 1 to 63 of 63 are 100.00 pct identical to residues 1 to 63 of 63 from GenPept 118 : gi|4585388|gb|AAD25416.1|AF125520_11 (AF125520) hypothetical protein [Bacteriophage 933W].


ensembl_gene_id: Z3369
symbol: Z3369
gene_biotype: protein_coding
description:
  Unknown protein encoded within prophage CP-933V; Residues 1 to 93 of 93 are 100.00 pct identical to residues 1 to 93 of 93 from GenPept 118 : gi|4585387|gb|AAD25415.1|AF125520_10 (AF125520) hypothetical protein [Bacteriophage 933W].


ensembl_gene_id: Z3370
symbol: Z3370
gene_biotype: protein_coding
description:
  Unknown protein encoded within prophage CP-933V; Residues 120 to 315 of 315 are 96.42 pct identical to residues 40 to 235 of 235 from GenPept 118 : gi|6863138|gb|AAF30379.1|AF069308_27 (AF069308) unknown [Bacteriophage HK022].


ensembl_gene_id: Z3371
symbol: Z3371
gene_biotype: protein_coding
description:
  Unknown protein encoded within prophage CP-933V; Residues 1 to 44 of 118 are 84.09 pct identical to residues 1 to 44 of 207 from GenPept 118 : gi|4585382|gb|AAD25410.1|AF125520_5 (AF125520) hypothetical protein [Bacteriophage 933W].


ensembl_gene_id: Z3372
symbol: Z3372
gene_biotype: protein_coding
description:
  Unknown protein encoded within prophage CP-933V; Residues 30 to 119 of 120 are 41.05 pct identical to residues 210 to 298 of 299 from GenPept 118 : gi|4585455|gb|AAD25483.1|AF125520_78 (AF125520) hypothetical protein [Bacteriophage 933W].


ensembl_gene_id: Z3375
symbol: intV
gene_biotype: protein_coding
description:
  Putative integrase for prophage CP-933V; Residues 1 to 423 of 428 are 65.95 pct identical to residues 9 to 430 of 444 from GenPept 118 : gi|4585378|gb|AAD25406.1|AF125520_1 (AF125520) integrase [Bacteriophage 933W]; Belongs to the 'phage' integrase family.


ensembl_gene_id: Z3376
symbol: yehV
gene_biotype: protein_coding
description:
  Putative transcriptional regulator; Residues 1 to 215 of 215 are 99.06 pct identical to residues 29 to 243 of 243 from Escherichia coli K-12 Strain MG1655: B2127.


ensembl_gene_id: Z3377
symbol: yehW
gene_biotype: protein_coding
description:
  Putative transport system permease protein; Residues 1 to 243 of 243 are 99.58 pct identical to residues 1 to 243 of 243 from Escherichia coli K-12 Strain MG1655: B2128.


ensembl_gene_id: Z3378
symbol: yehX
gene_biotype: protein_coding
description:
  Putative ATP-binding component of a transport system; Residues 1 to 308 of 308 are 98.70 pct identical to residues 1 to 308 of 308 from Escherichia coli K-12 Strain MG1655: B2129.


ensembl_gene_id: Z3379
symbol: yehY
gene_biotype: protein_coding
description:
  Putative transport system permease protein; Residues 181 to 371 of 385 are 32.46 pct identical to residues 149 to 323 of 354 from Escherichia coli K-12 Strain MG1655: B2678.


ensembl_gene_id: Z3380
symbol: yehZ
gene_biotype: protein_coding
description:
  Putative transport system permease protein; Residues 1 to 305 of 305 are 96.06 pct identical to residues 1 to 305 of 305 from Escherichia coli K-12 Strain MG1655: B2131.


ensembl_gene_id: Z3381
symbol: bglX
gene_biotype: protein_coding
description:
  beta-D-glucoside glucohydrolase, periplasmic; Residues 1 to 765 of 765 are 99.73 pct identical to residues 1 to 765 of 765 from Escherichia coli K-12 Strain MG1655: B2132; Belongs to the glycosyl hydrolase 3 family.


ensembl_gene_id: Z3382
symbol: dld
gene_biotype: protein_coding
description:
  D-lactate dehydrogenase, FAD protein, NADH independent; Catalyzes the oxidation of D-lactate to pyruvate. Belongs to the quinone-dependent D-lactate dehydrogenase family.


ensembl_gene_id: Z3383
symbol: pbpG
gene_biotype: protein_coding
description:
  Penicillin-binding protein 7; Residues 1 to 313 of 313 are 99.68 pct identical to residues 1 to 313 of 313 from Escherichia coli K-12 Strain MG1655: B2134; Belongs to the peptidase S11 family.


ensembl_gene_id: Z3384
symbol: yohC
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 203 of 203 are 99.50 pct identical to residues 1 to 203 of 203 from Escherichia coli K-12 Strain MG1655: B2135.


ensembl_gene_id: Z3385
symbol: yohD
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 204 of 204 are 99.01 pct identical to residues 1 to 204 of 204 from Escherichia coli K-12 Strain MG1655: B2136.


ensembl_gene_id: Z3386
symbol: yohF
gene_biotype: protein_coding
description:
  Putative oxidoreductase; Residues 1 to 253 of 253 are 98.41 pct identical to residues 1 to 253 of 253 from Escherichia coli K-12 Strain MG1655: B2137.


ensembl_gene_id: Z3387
symbol: yohG
gene_biotype: protein_coding
description:
  Putative outer membrane protein; Could be involved in resistance to puromycin, acriflavine and tetraphenylarsonium chloride; Belongs to the outer membrane factor (OMF) (TC 1.B.17) family.


ensembl_gene_id: Z3389
symbol: yohI
gene_biotype: protein_coding
description:
  Putative regulator protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U16 in tRNAs. Belongs to the Dus family. DusC subfamily.


ensembl_gene_id: Z3390
symbol: Z3390
gene_biotype: protein_coding
description:
  Putative hydroxylase; Residues 6 to 391 of 397 are 32.41 pct identical to residues 2 to 390 of 406 from GenPept 118 : gi|2290996|gb|AAC46266.1| (AF006000) unknown [Bordetella pertussis].


ensembl_gene_id: Z3391
symbol: maiA
gene_biotype: protein_coding
description:
  Putative glutathione-S-transferase; Residues 2 to 211 of 215 are 43.12 pct identical to residues 1 to 210 of 212 from GenPept 118 : gi|4220435|gb|AAD12621.1| (AF036940) similar to glutathione-s-transferase [Pseudomonas sp. U2].


ensembl_gene_id: Z3392
symbol: Z3392
gene_biotype: protein_coding
description:
  Putative isomerase-decarboxylase; Residues 5 to 232 of 233 are 54.82 pct identical to residues 4 to 226 of 231 from GenPept 118 : gi|3550668|emb|CAA12268.1| (AJ224977) ORF 2 [Sphingomonas sp. RW5].


ensembl_gene_id: Z3393
symbol: gtdA
gene_biotype: protein_coding
description:
  Putative 1,2-dioxygenase; Residues 9 to 341 of 342 are 53.59 pct identical to residues 13 to 346 of 347 from GenPept 118 : gi|5733104|gb|AAD49427.1|AF173167_1 (AF173167) gentisate 1,2-dioxygenase [Pseudomonas alcaligenes].


ensembl_gene_id: Z3394
symbol: Z3394
gene_biotype: protein_coding
description:
  Putative transporter; Residues 6 to 425 of 452 are 42.89 pct identical to residues 13 to 434 of 448 from GenPept 118 : gi|1147822|gb|AAA85137.1| (U10895) PcaK [Pseudomonas putida].


ensembl_gene_id: Z3395
symbol: Z3395
gene_biotype: protein_coding
description:
  Putative regulator; Residues 18 to 298 of 318 are 32.28 pct identical to residues 8 to 291 of 342 from GenPept 118 : gi|1173885|gb|AAA86620.1| (U40823) galactose binding protein regulator [Azospirillum brasilense]; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: Z3396
symbol: yohJ
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 132 of 132 are 99.24 pct identical to residues 1 to 132 of 132 from Escherichia coli K-12 Strain MG1655: B2141.


ensembl_gene_id: Z3397
symbol: yohK
gene_biotype: protein_coding
description:
  Putative seritonin transporter; Residues 1 to 231 of 231 are 99.56 pct identical to residues 1 to 231 of 231 from Escherichia coli K-12 Strain MG1655: B2142.


ensembl_gene_id: Z3398
symbol: cdd
gene_biotype: protein_coding
description:
  Cytidine/deoxycytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis.


ensembl_gene_id: Z3400
symbol: yeiS
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 79 of 79 are 100.00 pct identical to residues 1 to 79 of 79 from Escherichia coli K-12 Strain MG1655: B2145.


ensembl_gene_id: Z3401
symbol: preT
gene_biotype: protein_coding
description:
  Putative oxidoreductase; Involved in pyrimidine base degradation. Catalyzes physiologically the reduction of uracil to 5,6-dihydrouracil (DHU) by using NADH as a specific cosubstrate. It also catalyzes the reverse reaction and the reduction of thymine to 5,6-dihydrothymine (DHT) (By similarity).


ensembl_gene_id: Z3403
symbol: mglC
gene_biotype: protein_coding
description:
  Methyl-galactoside transport and galactose taxis; Residues 1 to 336 of 336 are 99.70 pct identical to residues 1 to 336 of 336 from Escherichia coli K-12 Strain MG1655: B2148; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: Z3404
symbol: mglA
gene_biotype: protein_coding
description:
  ATP-binding component of methyl-galactoside transport and galactose taxis; Part of the ABC transporter complex MglABC involved in galactose/methyl galactoside import. Responsible for energy coupling to the transport system.


ensembl_gene_id: Z3405
symbol: mglB
gene_biotype: protein_coding
description:
  Galactose-binding transport protein; Residues 1 to 332 of 332 are 99.69 pct identical to residues 1 to 332 of 332 from Escherichia coli K-12 Strain MG1655: B2150.


ensembl_gene_id: Z3407
symbol: galS
gene_biotype: protein_coding
description:
  Mgl repressor, galactose operon inducer; Residues 1 to 346 of 346 are 99.42 pct identical to residues 1 to 346 of 346 from Escherichia coli K-12 Strain MG1655: B2151.


ensembl_gene_id: Z3408
symbol: yeiB
gene_biotype: protein_coding
description:
  Hypothetical protein; Residues 44 to 428 of 428 are 99.22 pct identical to residues 1 to 385 of 385 from Escherichia coli K-12 Strain MG1655: B2152.


ensembl_gene_id: Z3409
symbol: folE
gene_biotype: protein_coding
description:
  GTP cyclohydrolase I; Residues 1 to 222 of 222 are 100.00 pct identical to residues 1 to 222 of 222 from Escherichia coli K-12 Strain MG1655: B2153.


ensembl_gene_id: Z3411
symbol: cirA
gene_biotype: protein_coding
description:
  Outer membrane receptor for iron-regulated colicin I receptor; Residues 1 to 659 of 659 are 98.79 pct identical to residues 1 to 663 of 663 from Escherichia coli K-12 Strain MG1655: B2155.


ensembl_gene_id: Z3413
symbol: lysP
gene_biotype: protein_coding
description:
  Lysine-specific permease; Residues 1 to 489 of 489 are 99.79 pct identical to residues 1 to 489 of 489 from Escherichia coli K-12 Strain MG1655: B2156.


ensembl_gene_id: Z3414
symbol: yeiE
gene_biotype: protein_coding
description:
  Putative transcriptional regulator LYSR-type; Residues 1 to 293 of 293 are 100.00 pct identical to residues 1 to 293 of 293 from Escherichia coli K-12 Strain MG1655: B2157; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: Z3415
symbol: yeiH
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 349 of 349 are 99.71 pct identical to residues 1 to 349 of 349 from Escherichia coli K-12 Strain MG1655: B2158.


ensembl_gene_id: Z3416
symbol: nfo
gene_biotype: protein_coding
description:
  Endonuclease IV; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic (AP) sites, generating a 3'-hydroxyl group and a 5'-terminal sugar phosphate.


ensembl_gene_id: Z3417
symbol: yeiI
gene_biotype: protein_coding
description:
  Putative kinase; Residues 1 to 362 of 362 are 98.06 pct identical to residues 1 to 362 of 362 from Escherichia coli K-12 Strain MG1655: B2160.


ensembl_gene_id: Z3418
symbol: yeiJ
gene_biotype: protein_coding
description:
  Putative transport system permease protein; Residues 1 to 413 of 413 are 99.75 pct identical to residues 4 to 416 of 416 from Escherichia coli K-12 Strain MG1655: B2161; Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family.


ensembl_gene_id: Z3419
symbol: yeiK
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Hydrolyzes cytidine or uridine to ribose and cytosine or uracil, respectively. Has a clear preference for cytidine over uridine. Strictly specific for ribonucleosides; Belongs to the IUNH family. RihB subfamily.


ensembl_gene_id: Z3420
symbol: yeiL
gene_biotype: protein_coding
description:
  Putative transcriptional regulator; Transcription regulator involved in mid-term, stationary- phase viability under nitrogen starvation. Might control expression of the salvage pathways or in some other way repress the recycling of nucleobases to nucleic acids and enhance their use as general nitrogen sources during nitrogen-limited growth (By similarity).


ensembl_gene_id: Z3421
symbol: yeiM
gene_biotype: protein_coding
description:
  Putative transport system permease protein; Residues 1 to 416 of 416 are 99.27 pct identical to residues 1 to 416 of 416 from Escherichia coli K-12 Strain MG1655: B2164; Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family.


ensembl_gene_id: Z3422
symbol: yeiN
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Catalyzes the reversible cleavage of pseudouridine 5'- phosphate (PsiMP) to ribose 5-phosphate and uracil. Functions biologically in the cleavage direction, as part of a pseudouridine degradation pathway; Belongs to the pseudouridine-5'-phosphate glycosidase family.


ensembl_gene_id: Z3423
symbol: yeiC
gene_biotype: protein_coding
description:
  Putative kinase; Residues 1 to 313 of 313 are 99.04 pct identical to residues 1 to 313 of 313 from Escherichia coli K-12 Strain MG1655: B2166.


ensembl_gene_id: Z3425
symbol: fruA
gene_biotype: protein_coding
description:
  PTS system, fructose-specific transport protein; Residues 1 to 563 of 563 are 99.46 pct identical to residues 1 to 563 of 563 from Escherichia coli K-12 Strain MG1655: B2167.


ensembl_gene_id: Z3426
symbol: fruK
gene_biotype: protein_coding
description:
  Fructose-1-phosphate kinase; Residues 1 to 312 of 312 are 100.00 pct identical to residues 1 to 312 of 312 from Escherichia coli K-12 Strain MG1655: B2168; Belongs to the carbohydrate kinase PfkB family.


ensembl_gene_id: Z3427
symbol: fruB
gene_biotype: protein_coding
description:
  PTS system, fructose-specific IIA/fpr component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. The enzyme II FruAB PTS system is involved in fructose transport.


ensembl_gene_id: Z3428
symbol: yeiO
gene_biotype: protein_coding
description:
  Putative transport; Residues 1 to 393 of 393 are 99.23 pct identical to residues 1 to 393 of 393 from Escherichia coli K-12 Strain MG1655: B2170.


ensembl_gene_id: Z3430
symbol: yeiP
gene_biotype: protein_coding
description:
  Putative elongation factor; Residues 1 to 275 of 275 are 99.63 pct identical to residues 1 to 275 of 275 from Escherichia coli K-12 Strain MG1655: B2171; Belongs to the elongation factor P family.


ensembl_gene_id: Z3431
symbol: yeiQ
gene_biotype: protein_coding
description:
  Putative oxidoreductase; Residues 1 to 488 of 488 are 98.36 pct identical to residues 1 to 488 of 488 from Escherichia coli K-12 Strain MG1655: B2172; Belongs to the mannitol dehydrogenase family.


ensembl_gene_id: Z3432
symbol: yeiR
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 328 of 328 are 98.78 pct identical to residues 1 to 328 of 328 from Escherichia coli K-12 Strain MG1655: B2173.


ensembl_gene_id: Z3433
symbol: lpxT
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Involved in the modification of the lipid A domain of lipopolysaccharides (LPS). Transfers a phosphate group from undecaprenyl pyrophosphate (C55-PP) to lipid A to form lipid A 1- diphosphate. Contributes to the recycling of undecaprenyl phosphate (C55-P); Belongs to the LpxT phosphotransferase family.


ensembl_gene_id: Z3434
symbol: spr
gene_biotype: protein_coding
description:
  Putative lipoprotein; A murein DD-endopeptidase with specificity for D-Ala-meso- diaminopimelic acid (mDAP) cross-links. Its role is probably to cleave D-Ala-mDAP cross-links to allow insertion of new glycans and thus cell wall expansion. Functionally redundant with MepM and MepH. Also has weak LD-carboxypeptidase activity on L-mDAP-D-Ala peptide bonds (By similarity).


ensembl_gene_id: Z3435
symbol: rtn
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 518 of 518 are 99.42 pct identical to residues 1 to 518 of 518 from Escherichia coli K-12 Strain MG1655: B2176.


ensembl_gene_id: Z3436
symbol: yejA
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 606 of 606 are 98.51 pct identical to residues 1 to 606 of 606 from Escherichia coli K-12 Strain MG1655: B2177.


ensembl_gene_id: Z3437
symbol: yejB
gene_biotype: protein_coding
description:
  Putative transport system permease protein; Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane (By similarity); Belongs to the binding-protein-dependent transport system permease family. OppBC subfamily.


ensembl_gene_id: Z3438
symbol: yejE
gene_biotype: protein_coding
description:
  Putative transport system permease protein; Residues 1 to 341 of 341 are 99.12 pct identical to residues 1 to 341 of 341 from Escherichia coli K-12 Strain MG1655: B2179.


ensembl_gene_id: Z3439
symbol: yejF
gene_biotype: protein_coding
description:
  Putative ATP-binding component of a transport system; Residues 1 to 529 of 529 are 99.43 pct identical to residues 1 to 529 of 529 from Escherichia coli K-12 Strain MG1655: B2180; Belongs to the ABC transporter superfamily.


ensembl_gene_id: Z3440
symbol: yejG
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 114 of 114 are 99.12 pct identical to residues 1 to 114 of 114 from Escherichia coli K-12 Strain MG1655: B2181.


ensembl_gene_id: Z3441
symbol: bcr
gene_biotype: protein_coding
description:
  Bicyclomycin resistance protein; Residues 1 to 396 of 396 are 99.49 pct identical to residues 1 to 396 of 396 from Escherichia coli K-12 Strain MG1655: B2182.


ensembl_gene_id: Z3442
symbol: rsuA
gene_biotype: protein_coding
description:
  16S pseudouridylate 516 synthase; Responsible for synthesis of pseudouridine from uracil-516 in 16S ribosomal RNA.


ensembl_gene_id: Z3443
symbol: yejH
gene_biotype: protein_coding
description:
  Putative ATP-dependent helicase; Residues 1 to 586 of 586 are 99.65 pct identical to residues 1 to 586 of 586 from Escherichia coli K-12 Strain MG1655: B2184.


ensembl_gene_id: Z3444
symbol: rplY
gene_biotype: protein_coding
description:
  50S ribosomal subunit protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family.


ensembl_gene_id: Z3445
symbol: yejK
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 335 of 335 are 99.70 pct identical to residues 1 to 335 of 335 from Escherichia coli K-12 Strain MG1655: B2186.


ensembl_gene_id: Z3446
symbol: yejL
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 75 of 75 are 100.00 pct identical to residues 1 to 75 of 75 from Escherichia coli K-12 Strain MG1655: B2187; Belongs to the UPF0352 family.


ensembl_gene_id: Z3447
symbol: yejM
gene_biotype: protein_coding
description:
  Putative sulfatase; Residues 1 to 586 of 586 are 100.00 pct identical to residues 1 to 586 of 586 from Escherichia coli K-12 Strain MG1655: B2188.


ensembl_gene_id: Z3449
symbol: yejO
gene_biotype: protein_coding
description:
  Putative ATP-binding component of a transport system; Residues 1 to 836 of 836 are 96.65 pct identical to residues 1 to 836 of 836 from Escherichia coli K-12 Strain MG1655: B2190.


ensembl_gene_id: Z3450
symbol: narP
gene_biotype: protein_coding
description:
  Nitrate/nitrite response regulator (sensor NarQ); Residues 1 to 215 of 215 are 99.06 pct identical to residues 1 to 215 of 215 from Escherichia coli K-12 Strain MG1655: B2193.


ensembl_gene_id: Z3452
symbol: dsbE
gene_biotype: protein_coding
description:
  Disulfide oxidoreductase (in biogenesis of cytochrome c; Involved in disulfide bond formation. Catalyzes a late, reductive step in the assembly of periplasmic c-type cytochromes, probably the reduction of disulfide bonds of the apocytochrome c to allow covalent linkage with the heme. Possible subunit of a heme lyase (By similarity); Belongs to the thioredoxin family. DsbE subfamily.


ensembl_gene_id: Z3453
symbol: ccmF
gene_biotype: protein_coding
description:
  Cytochrome c-type biogenesis protein; Residues 1 to 647 of 647 are 99.69 pct identical to residues 1 to 647 of 647 from Escherichia coli K-12 Strain MG1655: B2196.


ensembl_gene_id: Z3454
symbol: ccmE
gene_biotype: protein_coding
description:
  Cytochrome c biogenesis, possible subunit of a heme lyase; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. Belongs to the CcmE/CycJ family.


ensembl_gene_id: Z3455
symbol: ccmD
gene_biotype: protein_coding
description:
  Heme exporter protein C; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmD/CycX/HelD family.


ensembl_gene_id: Z3456
symbol: ccmC
gene_biotype: protein_coding
description:
  Heme exporter protein C; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmC/CycZ/HelC family.


ensembl_gene_id: Z3457
symbol: ccmB
gene_biotype: protein_coding
description:
  Heme exporter protein B, cytochrome c-type biogenesis protein; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmB/CycW/HelB family.


ensembl_gene_id: Z3458
symbol: ccmA
gene_biotype: protein_coding
description:
  ATP binding protein of heme exporter A; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family.


ensembl_gene_id: Z3460
symbol: napB
gene_biotype: protein_coding
description:
  Cytochrome c-type protein; Electron transfer subunit of the periplasmic nitrate reductase complex NapAB; Belongs to the NapB family.


ensembl_gene_id: Z3461
symbol: napH
gene_biotype: protein_coding
description:
  Ferredoxin-type protein: electron transfer; Residues 1 to 287 of 287 are 99.65 pct identical to residues 1 to 287 of 287 from Escherichia coli K-12 Strain MG1655: B2204.


ensembl_gene_id: Z3462
symbol: napG
gene_biotype: protein_coding
description:
  Ferredoxin-type protein: electron transfer; Residues 1 to 231 of 231 are 99.56 pct identical to residues 1 to 231 of 231 from Escherichia coli K-12 Strain MG1655: B2205.


ensembl_gene_id: Z3463
symbol: napA
gene_biotype: protein_coding
description:
  Probable nitrate reductase 3; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite.


ensembl_gene_id: Z3464
symbol: napD
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Chaperone for NapA, the catalytic subunit of the periplasmic nitrate reductase. It binds directly and specifically to the twin- arginine signal peptide of NapA, preventing premature interaction with the Tat translocase and premature export.


ensembl_gene_id: Z3465
symbol: napF
gene_biotype: protein_coding
description:
  Ferredoxin-type protein: electron transfer; Could be involved in the maturation of NapA, the catalytic subunit of the periplasmic nitrate reductase, before its export into the periplasm; Belongs to the NapF family.


ensembl_gene_id: Z3467
symbol: eco
gene_biotype: protein_coding
description:
  Ecotin, a serine protease inhibitor; General inhibitor of pancreatic serine proteases: inhibits chymotrypsin, trypsin, elastases, factor X, kallikrein as well as a variety of other proteases.


ensembl_gene_id: Z3468
symbol: yojH
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 548 of 548 are 99.63 pct identical to residues 1 to 548 of 548 from Escherichia coli K-12 Strain MG1655: B2210.


ensembl_gene_id: Z3469
symbol: yojI
gene_biotype: protein_coding
description:
  Putative ATP-binding component of a transport system; Residues 1 to 547 of 547 are 99.26 pct identical to residues 1 to 547 of 547 from Escherichia coli K-12 Strain MG1655: B2211.


ensembl_gene_id: Z3470
symbol: alkB
gene_biotype: protein_coding
description:
  DNA repair system specific for alkylated DNA; Residues 1 to 216 of 216 are 99.53 pct identical to residues 1 to 216 of 216 from Escherichia coli K-12 Strain MG1655: B2212.


ensembl_gene_id: Z3471
symbol: ada
gene_biotype: protein_coding
description:
  O6-methylguanine-DNA methyltransferase; Residues 1 to 354 of 354 are 98.58 pct identical to residues 1 to 354 of 354 from Escherichia coli K-12 Strain MG1655: B2213.


ensembl_gene_id: Z3472
symbol: yojL
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein such as NqrB and NqrC, two subunits of the NQR complex; Belongs to the ApbE family.


ensembl_gene_id: Z3473
symbol: ompC
gene_biotype: protein_coding
description:
  Outer membrane protein 1b (Ib;c); Forms pores that allow passive diffusion of small molecules across the outer membrane.


ensembl_gene_id: Z3475
symbol: yojN
gene_biotype: protein_coding
description:
  Putative 2-component sensor protein; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsD is a phosphotransfer intermediate between the sensor kinase RcsC and the response regulator RcsB. It acquires a phosphoryl group from RcsC and transfers it to RcsB.


ensembl_gene_id: Z3476
symbol: rcsB
gene_biotype: protein_coding
description:
  Positive response regulator for colanic capsule biosynthesis, (sensor, RcsC); Component of the Rcs signaling system, which controls transcription of numerous genes. RcsB is the response regulator that binds to regulatory DNA regions. Can function both in an RcsA-dependent or RcsA-independent manner.


ensembl_gene_id: Z3477
symbol: rcsC
gene_biotype: protein_coding
description:
  Sensor for ctr capsule biosynthesis, probable histidine kinase acting on RcsB; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsC functions as a membrane- associated protein kinase that phosphorylates RcsD in response to environmental signals. The phosphoryl group is then transferred to the response regulator RcsB.


ensembl_gene_id: Z3478
symbol: yfaP
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 258 of 258 are 99.61 pct identical to residues 1 to 258 of 258 from Escherichia coli K-12 Strain MG1655: B2225.


ensembl_gene_id: Z3479
symbol: Z3479
gene_biotype: protein_coding
description:
  Hypothetical protein; Residues 1 to 260 of 260 are 96.53 pct identical to residues 290 to 549 of 549 from Escherichia coli K-12 Strain MG1655: B2226.


ensembl_gene_id: Z3480
symbol: Z3480
gene_biotype: protein_coding
description:
  Hypothetical protein; Residues 1 to 264 of 264 are 98.86 pct identical to residues 1 to 264 of 549 from Escherichia coli K-12 Strain MG1655: B2226.


ensembl_gene_id: Z3481
symbol: yfaS
gene_biotype: protein_coding
description:
  Hypothetical protein; Residues 31 to 1367 of 1534 are 98.65 pct identical to residues 1 to 1337 of 1337 from Escherichia coli K-12 Strain MG1655: B2228; Belongs to the protease inhibitor I39 (alpha-2- macroglobulin) family. Bacterial alpha-2-macroglobulin subfamily.


ensembl_gene_id: Z3482
symbol: yfaT
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 216 of 216 are 100.00 pct identical to residues 1 to 216 of 216 from Escherichia coli K-12 Strain MG1655: B2229.


ensembl_gene_id: Z3483
symbol: yfaA
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 521 of 521 are 98.46 pct identical to residues 58 to 578 of 578 from Escherichia coli K-12 Strain MG1655: B2230.


ensembl_gene_id: Z3484
symbol: gyrA
gene_biotype: protein_coding
description:
  DNA gyrase, subunit A, type II topoisomerase; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP- [...]


ensembl_gene_id: Z3486
symbol: ubiG
gene_biotype: protein_coding
description:
  3-demethylubiquinone-9 3-methyltransferase and 2-octaprenyl-6-hydroxy phenol methylase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family.


ensembl_gene_id: Z3487
symbol: yfaL
gene_biotype: protein_coding
description:
  Putative ATP-binding component of a transport system; Residues 1 to 1250 of 1250 are 95.84 pct identical to residues 1 to 1250 of 1250 from Escherichia coli K-12 Strain MG1655: B2233.


ensembl_gene_id: Z3489
symbol: nrdA
gene_biotype: protein_coding
description:
  Ribonucleoside diphosphate reductase 1, alpha subunit, B1; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.


ensembl_gene_id: Z3491
symbol: nrdB
gene_biotype: protein_coding
description:
  Ribonucleoside diphosphage reductase 1, beta subunit, B2; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. R2 contains the tyrosyl radical required for catalysis.


ensembl_gene_id: Z3492
symbol: yfaE
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 84 of 84 are 98.80 pct identical to residues 1 to 84 of 84 from Escherichia coli K-12 Strain MG1655: B2236.


ensembl_gene_id: Z3493
symbol: inaA
gene_biotype: protein_coding
description:
  pH-inducible protein involved in stress response; Residues 1 to 216 of 216 are 98.14 pct identical to residues 1 to 216 of 216 from Escherichia coli K-12 Strain MG1655: B2237.


ensembl_gene_id: Z3494
symbol: Z3494
gene_biotype: protein_coding
description:
  Putative antibiotic efflux protein; Residues 3 to 382 of 396 are 38.32 pct identical to residues 5 to 383 of 396 from GenPept 118 : gi|2636170|emb|CAB15662.1| (Z99122) similar to antibiotic resistance protein [Bacillus subtilis].


ensembl_gene_id: Z3495
symbol: yfaH
gene_biotype: protein_coding
description:
  Putative regulator; Residues 1 to 264 of 292 are 32.70 pct identical to residues 1 to 266 of 292 from GenPept 118 : gi|2635912|emb|CAB15404.1| (Z99121) similar to transcriptional regulator (LysR family) [Bacillus subtilis]; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: Z3497
symbol: glpQ
gene_biotype: protein_coding
description:
  Glycerophosphodiester phosphodiesterase, periplasmic; Residues 1 to 358 of 358 are 99.16 pct identical to residues 1 to 358 of 358 from Escherichia coli K-12 Strain MG1655: B2239.


ensembl_gene_id: Z3498
symbol: glpT
gene_biotype: protein_coding
description:
  Sn-glycerol-3-phosphate permease; Residues 1 to 452 of 452 are 99.11 pct identical to residues 1 to 452 of 452 from Escherichia coli K-12 Strain MG1655: B2240.


ensembl_gene_id: Z3499
symbol: glpA
gene_biotype: protein_coding
description:
  Sn-glycerol-3-phosphate dehydrogenase (anaerobic), large subunit; Conversion of glycerol 3-phosphate to dihydroxyacetone. Uses fumarate or nitrate as electron acceptor (By similarity).


ensembl_gene_id: Z3500
symbol: glpB
gene_biotype: protein_coding
description:
  Sn-glycerol-3-phosphate dehydrogenase (anaerobic), membrane anchor subunit; Conversion of glycerol 3-phosphate to dihydroxyacetone. Uses fumarate or nitrate as electron acceptor; Belongs to the anaerobic G-3-P dehydrogenase subunit B family.


ensembl_gene_id: Z3501
symbol: glpC
gene_biotype: protein_coding
description:
  Sn-glycerol-3-phosphate dehydrogenase (anaerobic), K-small subunit; Electron transfer protein; may also function as the membrane anchor for the GlpAB dimer.


ensembl_gene_id: Z3502
symbol: yfaD
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 303 of 308 are 94.05 pct identical to residues 1 to 295 of 299 from Escherichia coli K-12 Strain MG1655: B2244.


ensembl_gene_id: Z3503
symbol: rhmA
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Catalyzes the reversible retro-aldol cleavage of 2-keto-3- deoxy-L-rhamnonate (KDR) to pyruvate and lactaldehyde. Belongs to the HpcH/HpaI aldolase family. KDR aldolase subfamily.


ensembl_gene_id: Z3504
symbol: Z3504
gene_biotype: protein_coding
description:
  Putative transport protein; Residues 1 to 442 of 442 are 99.09 pct identical to residues 1 to 442 of 442 from Escherichia coli K-12 Strain MG1655: B2246.


ensembl_gene_id: Z3506
symbol: rhmR
gene_biotype: protein_coding
description:
  Putative regulator; Residues 1 to 260 of 260 are 98.84 pct identical to residues 1 to 260 of 260 from Escherichia coli K-12 Strain MG1655: B2248.


ensembl_gene_id: Z3507
symbol: yfaY
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 400 of 400 are 99.75 pct identical to residues 1 to 400 of 400 from Escherichia coli K-12 Strain MG1655: B2249; Belongs to the CinA family.


ensembl_gene_id: Z3508
symbol: yfaZ
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 187 of 187 are 98.93 pct identical to residues 1 to 187 of 187 from Escherichia coli K-12 Strain MG1655: B2250.


ensembl_gene_id: Z3509
symbol: yfaO
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Catalyzes the hydrolysis of nucleoside triphosphates, with a preference for pyrimidine deoxynucleoside triphosphates (dUTP, dTTP and dCTP); Belongs to the Nudix hydrolase family. NudI subfamily.


ensembl_gene_id: Z3510
symbol: ais
gene_biotype: protein_coding
description:
  Protein induced by aluminum; Catalyzes the dephosphorylation of heptose(II) of the outer membrane lipopolysaccharide core.


ensembl_gene_id: Z3511
symbol: arnB
gene_biotype: protein_coding
description:
  Putative enzyme; Catalyzes the conversion of UDP-4-keto-arabinose (UDP-Ara4O) to UDP-4-amino-4-deoxy-L-arabinose (UDP-L-Ara4N). The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides; Belongs to the DegT/DnrJ/EryC1 family. ArnB subfamily.


ensembl_gene_id: Z3512
symbol: arnC
gene_biotype: protein_coding
description:
  Putative sugar transferase; Catalyzes the transfer of 4-deoxy-4-formamido-L-arabinose from UDP to undecaprenyl phosphate. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides.


ensembl_gene_id: Z3513
symbol: arnA
gene_biotype: protein_coding
description:
  Putative transformylase; Bifunctional enzyme that catalyzes the oxidative decarboxylation of UDP-glucuronic acid (UDP-GlcUA) to UDP-4-keto- arabinose (UDP-Ara4O) and the addition of a formyl group to UDP-4- amino-4-deoxy-L-arabinose (UDP-L-Ara4N) to form UDP-L-4-formamido- arabinose (UDP-L-Ara4FN). The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides; In the C-terminal section; belongs to the NAD(P)-dependent epimerase/dehydratase family. UDP-glucuronic acid decarboxylase subfamily.


ensembl_gene_id: Z3514
symbol: arnD
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Catalyzes the deformylation of 4-deoxy-4-formamido-L- arabinose-phosphoundecaprenol to 4-amino-4-deoxy-L-arabinose- phosphoundecaprenol. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides; Belongs to the polysaccharide deacetylase family. ArnD deformylase subfamily.


ensembl_gene_id: Z3515
symbol: arnT
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Catalyzes the transfer of the L-Ara4N moiety of the glycolipid undecaprenyl phosphate-alpha-L-Ara4N to lipid A. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides. Belongs to the glycosyltransferase 83 family.


ensembl_gene_id: Z3516
symbol: arnE
gene_biotype: protein_coding
description:
  Hypothetical protein; Translocates 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol (alpha-L-Ara4N-phosphoundecaprenol) from the cytoplasmic to the periplasmic side of the inner membrane; Belongs to the ArnE family.


ensembl_gene_id: Z3517
symbol: arnF
gene_biotype: protein_coding
description:
  Hypothetical protein; Translocates 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol (alpha-L-Ara4N-phosphoundecaprenol) from the cytoplasmic to the periplasmic side of the inner membrane; Belongs to the ArnF family.


ensembl_gene_id: Z3518
symbol: pmrD-2
gene_biotype: protein_coding
description:
  Hypothetical protein; Residues 1 to 88 of 88 are 98.86 pct identical to residues 11 to 98 of 98 from GenPept 118 : gi|1788593|gb|AAC75319.1| (AE000315) polymyxin resistance protein B [Escherichia coli].


ensembl_gene_id: Z3519
symbol: pmrD
gene_biotype: protein_coding
description:
  Polymyxin resistance protein B; Residues 1 to 98 of 98 are 97.95 pct identical to residues 1 to 98 of 98 from Escherichia coli K-12 Strain MG1655: B2259.


ensembl_gene_id: Z3520
symbol: menE
gene_biotype: protein_coding
description:
  o-succinylbenzoate-CoA ligase; Converts 2-succinylbenzoate (OSB) to 2-succinylbenzoyl-CoA (OSB-CoA); Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily.


ensembl_gene_id: Z3521
symbol: menC
gene_biotype: protein_coding
description:
  o-succinylbenzoyl-CoA synthase; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB).


ensembl_gene_id: Z3522
symbol: menB
gene_biotype: protein_coding
description:
  Dihydroxynaphtoic acid synthetase; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA).


ensembl_gene_id: Z3523
symbol: yfbB
gene_biotype: protein_coding
description:
  Putative enzyme; Catalyzes a proton abstraction reaction that results in 2,5- elimination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC) and the formation of 2-succinyl-6- hydroxy-2,4-cyclohexadiene-1-carboxylate (SHCHC).


ensembl_gene_id: Z3524
symbol: menD
gene_biotype: protein_coding
description:
  2-oxoglutarate decarboxylase; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC).


ensembl_gene_id: Z3525
symbol: menF
gene_biotype: protein_coding
description:
  Isochorismate hydroxymutase 2, menaquinone biosynthesis; Catalyzes the conversion of chorismate to isochorismate.


ensembl_gene_id: Z3526
symbol: elaB
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 101 of 101 are 100.00 pct identical to residues 1 to 101 of 101 from Escherichia coli K-12 Strain MG1655: B2266; Belongs to the ElaB/YgaM/YqjD family.


ensembl_gene_id: Z3527
symbol: elaA
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 153 of 153 are 98.69 pct identical to residues 1 to 153 of 153 from Escherichia coli K-12 Strain MG1655: B2267.


ensembl_gene_id: Z3528
symbol: elaC
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Zinc phosphodiesterase, which has both exoribonuclease and endoribonuclease activities.


ensembl_gene_id: Z3529
symbol: elaD
gene_biotype: protein_coding
description:
  Putative sulfatase/phosphatase; Protease that can act as an efficient and specific deubiquitinating enzyme in vitro. Does not possess desumoylating and deneddylating activities. The physiological substrate is unknown (By similarity).


ensembl_gene_id: Z3531
symbol: Z3531
gene_biotype: protein_coding
description:
  Hypothetical protein; Residues 1 to 80 of 80 are 88.74 pct identical to residues 246 to 325 of 325 from Escherichia coli K-12 Strain MG1655: B2271.


ensembl_gene_id: Z3533
symbol: yfbM
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 167 of 167 are 98.80 pct identical to residues 1 to 167 of 167 from Escherichia coli K-12 Strain MG1655: B2272.


ensembl_gene_id: Z3534
symbol: nuoN
gene_biotype: protein_coding
description:
  NADH dehydrogenase I chain N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family.


ensembl_gene_id: Z3536
symbol: nuoM
gene_biotype: protein_coding
description:
  NADH dehydrogenase I chain M; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient (By similarity); Belongs to the complex I subunit 4 family.


ensembl_gene_id: Z3537
symbol: nuoL
gene_biotype: protein_coding
description:
  NADH dehydrogenase I chain L; Residues 1 to 613 of 613 are 99.83 pct identical to residues 1 to 613 of 613 from Escherichia coli K-12 Strain MG1655: B2278.


ensembl_gene_id: Z3538
symbol: nuoK
gene_biotype: protein_coding
description:
  NADH dehydrogenase I chain K; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family.


ensembl_gene_id: Z3539
symbol: nuoJ
gene_biotype: protein_coding
description:
  NADH dehydrogenase I chain J; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient (By similarity); Belongs to the complex I subunit 6 family.


ensembl_gene_id: Z3540
symbol: nuoI
gene_biotype: protein_coding
description:
  NADH dehydrogenase I chain I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: Z3541
symbol: nuoH
gene_biotype: protein_coding
description:
  NADH dehydrogenase I chain H; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone.


ensembl_gene_id: Z3542
symbol: nuoG
gene_biotype: protein_coding
description:
  NADH dehydrogenase I chain G; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient (By similarity).


ensembl_gene_id: Z3543
symbol: nuoF
gene_biotype: protein_coding
description:
  NADH dehydrogenase I chain F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family.


ensembl_gene_id: Z3544
symbol: nuoE
gene_biotype: protein_coding
description:
  NADH dehydrogenase I chain E; Residues 1 to 166 of 166 are 99.39 pct identical to residues 1 to 166 of 166 from Escherichia coli K-12 Strain MG1655: B2285.


ensembl_gene_id: Z3545
symbol: nuoC
gene_biotype: protein_coding
description:
  NADH dehydrogenase I chain C, D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the N-terminal section; belongs to the complex I 30 kDa subunit family.


ensembl_gene_id: Z3546
symbol: nuoB
gene_biotype: protein_coding
description:
  NADH dehydrogenase I chain B; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: Z3547
symbol: nuoA
gene_biotype: protein_coding
description:
  NADH dehydrogenase I chain A; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family.


ensembl_gene_id: Z3549
symbol: lrhA
gene_biotype: protein_coding
description:
  NADH dehydrogenase transcriptional regulator, LysR family; Not known, does not seem to act on the proton translocating NADH dehydrogenase genes (nuoA-N) which are part of the lrhA operon.


ensembl_gene_id: Z3551
symbol: alaA
gene_biotype: protein_coding
description:
  Putative aminotransferase; Residues 1 to 405 of 405 are 99.75 pct identical to residues 1 to 405 of 405 from Escherichia coli K-12 Strain MG1655: B2290.


ensembl_gene_id: Z3552
symbol: yfbR
gene_biotype: protein_coding
description:
  Putative alpha helix protein; Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates.


ensembl_gene_id: Z3553
symbol: yfbS
gene_biotype: protein_coding
description:
  Putative transport protein; Residues 1 to 610 of 610 are 100.00 pct identical to residues 1 to 610 of 610 from Escherichia coli K-12 Strain MG1655: B2292.


ensembl_gene_id: Z3554
symbol: yfbT
gene_biotype: protein_coding
description:
  Putative phosphatase; Residues 1 to 216 of 216 are 98.61 pct identical to residues 7 to 222 of 222 from Escherichia coli K-12 Strain MG1655: B2293.


ensembl_gene_id: Z3555
symbol: yfbU
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 170 of 170 are 100.00 pct identical to residues 1 to 170 of 170 from Escherichia coli K-12 Strain MG1655: B2294; Belongs to the UPF0304 family.


ensembl_gene_id: Z3556
symbol: yfbV
gene_biotype: protein_coding
description:
  Orf, hypothetical protein; Residues 1 to 151 of 151 are 100.00 pct identical to residues 1 to 151 of 151 from Escherichia coli K-12 Strain MG1655: B2295.


ensembl_gene_id: Z3558
symbol: ackA
gene_biotype: protein_coding
description:
  Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.


ensembl_gene_id: Z3559
symbol: pta
gene_biotype: protein_coding
description:
  Phosphotransacetylase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.


ensembl_gene_id: Z3560
symbol: yfcC
gene_biotype: protein_coding
description:
  Putative S-transferase; Residues 1 to 513 of 513 are 99.61 pct identical to residues 1 to 513 of 513 from Escherichia coli K-12 Strain MG1655: B2298.


